ID CM000668; SV 1; linear; genomic DNA; CON; HUM; 171115067 BP. XX AC CM000668; XX PR Project:PRJNA31257; XX DT 09-MAR-2009 (Rel. 100, Created) DT 29-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Homo sapiens chromosome 6, GRCh37 primary reference assembly. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Erratum:[Nature 2001 Aug 2;412(6846):565] RP 1-171115067 RX DOI; 10.1038/35057062. RX PUBMED; 11237011. RG International Human Genome Sequencing Consortium RA Lander E.S., Linton L.M., Birren B., Nusbaum C., Zody M.C., Baldwin J., RA Devon K., Dewar K., Doyle M., FitzHugh W., Funke R., Gage D., Harris K., RA Heaford A., Howland J., Kann L., Lehoczky J., LeVine R., McEwan P., RA McKernan K., Meldrim J., Mesirov J.P., Miranda C., Morris W., Naylor J., RA Raymond C., Rosetti M., Santos R., Sheridan A., Sougnez C., RA Stange-Thomann N., Stojanovic N., Subramanian A., Wyman D., Rogers J., RA Sulston J., Ainscough R., Beck S., Bentley D., Burton J., Clee C., RA Carter N., Coulson A., Deadman R., Deloukas P., Dunham A., Dunham I., RA Durbin R., French L., Grafham D., Gregory S., Hubbard T., Humphray S., RA Hunt A., Jones M., Lloyd C., McMurray A., Matthews L., Mercer S., Milne S., RA Mullikin J.C., Mungall A., Plumb R., Ross M., Shownkeen R., Sims S., RA Waterston R.H., Wilson R.K., Hillier L.W., McPherson J.D., Marra M.A., RA Mardis E.R., Fulton L.A., Chinwalla A.T., Pepin K.H., Gish W.R., RA Chissoe S.L., Wendl M.C., Delehaunty K.D., Miner T.L., Delehaunty A., RA Kramer J.B., Cook L.L., Fulton R.S., Johnson D.L., Minx P.J., Clifton S.W., RA Hawkins T., Branscomb E., Predki P., Richardson P., Wenning S., Slezak T., RA Doggett N., Cheng J.F., Olsen A., Lucas S., Elkin C., Uberbacher E., RA Frazier M., Gibbs R.A., Muzny D.M., Scherer S.E., Bouck J.B., RA Sodergren E.J., Worley K.C., Rives C.M., Gorrell J.H., Metzker M.L., RA Naylor S.L., Kucherlapati R.S., Nelson D.L., Weinstock G.M., Sakaki Y., RA Fujiyama A., Hattori M., Yada T., Toyoda A., Itoh T., Kawagoe C., RA Watanabe H., Totoki Y., Taylor T., Weissenbach J., Heilig R., Saurin W., RA Artiguenave F., Brottier P., Bruls T., Pelletier E., Robert C., Wincker P., RA Smith D.R., Doucette-Stamm L., Rubenfield M., Weinstock K., Lee H.M., RA Dubois J., Rosenthal A., Platzer M., Nyakatura G., Taudien S., Rump A., RA Yang H., Yu J., Wang J., Huang G., Gu J., Hood L., Rowen L., Madan A., RA Qin S., Davis R.W., Federspiel N.A., Abola A.P., Proctor M.J., Myers R.M., RA Schmutz J., Dickson M., Grimwood J., Cox D.R., Olson M.V., Kaul R., RA Raymond C., Shimizu N., Kawasaki K., Minoshima S., Evans G.A., RA Athanasiou M., Schultz R., Roe B.A., Chen F., Pan H., Ramser J., RA Lehrach H., Reinhardt R., McCombie W.R., de la Bastide M., Dedhia N., RA Blocker H., Hornischer K., Nordsiek G., Agarwala R., Aravind L., RA Bailey J.A., Bateman A., Batzoglou S., Birney E., Bork P., Brown D.G., RA Burge C.B., Cerutti L., Chen H.C., Church D., Clamp M., Copley R.R., RA Doerks T., Eddy S.R., Eichler E.E., Furey T.S., Galagan J., Gilbert J.G., RA Harmon C., Hayashizaki Y., Haussler D., Hermjakob H., Hokamp K., Jang W., RA Johnson L.S., Jones T.A., Kasif S., Kaspryzk A., Kennedy S., Kent W.J., RA Kitts P., Koonin E.V., Korf I., Kulp D., Lancet D., Lowe T.M., RA McLysaght A., Mikkelsen T., Moran J.V., Mulder N., Pollara V.J., RA Ponting C.P., Schuler G., Schultz J., Slater G., Smit A.F., Stupka E., RA Szustakowski J., Thierry-Mieg D., Thierry-Mieg J., Wagner L., Wallis J., RA Wheeler R., Williams A., Wolf Y.I., Wolfe K.H., Yang S.P., Yeh R.F., RA Collins F., Guyer M.S., Peterson J., Felsenfeld A., Wetterstrand K.A., RA Patrinos A., Morgan M.J., de Jong P., Catanese J.J., Osoegawa K., RA Shizuya H., Choi S., Chen Y.J.; RT "Initial sequencing and analysis of the human genome"; RL Nature 409(6822):860-921(2001). XX RN [2] RP 1-171115067 RX DOI; 10.1038/nature02055. RX PUBMED; 14574404. RA Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., RA Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G., RA Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., RA Andrews T.D., Ashwell R.I., Babbage A.K., Bagguley C.L., Bailey J., RA Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., RA Beasley O., Bird C.P., Blakey S., Bray-Allen S., Brook J., Brown A.J., RA Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., RA Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., RA Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., RA Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., RA Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., RA French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., RA Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., RA Griffiths M., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., RA Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., RA Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., RA Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., RA Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., RA Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., RA Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., RA Moore M.J., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., RA Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., RA Phillimore B., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., RA Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., RA Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., RA Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., RA Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., RA Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., RA Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., RA Durbin R., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S.; RT "The DNA sequence and analysis of human chromosome 6"; RL Nature 425(6960):805-811(2003). XX RN [3] RP 1-171115067 RX DOI; 10.1038/nature03001. RX PUBMED; 15496913. RG International Human Genome Sequencing Consortium RA ; RT "Finishing the euchromatic sequence of the human genome"; RL Nature 431(7011):931-945(2004). XX RN [4] RP 1-171115067 RG Genome Reference Consortium RA ; RT ; RL Submitted (24-FEB-2009) to the INSDC. RL NCBI, NIH, Bethesda, MD 20892, USA XX CC The DNA sequence is composed of genomic sequence, primarily CC finished clones that were sequenced as part of the Human Genome CC Project. PCR products and WGS shotgun sequence have been added CC where necessary to fill gaps or correct errors. All such additions CC are manually curated by GRC staff. For more information see: CC http://genomereference.org. XX CO join(gap(10000),gap(50000),GL000052.1:1..58720166,gap(50000),gap(3000000), CO gap(50000),GL000053.1:1..33800377,gap(150000),GL000054.1:1..75224524, CO gap(50000),gap(10000)) XX FH Key Location/Qualifiers FH FT source 1..171115067 FT /organism="Homo sapiens" FT /chromosome="6" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gap 1..10000 FT /estimated_length=10000 FT gap 10001..60000 FT /estimated_length=50000 FT misc_feature 60001..146701 FT /note="annotated region of clone" FT misc_feature 60001 FT /note="Clone_left_end: RP1-24O22" FT misc_feature 89743 FT /note="Weak data" FT CDS complement(105919..106856) FT /pseudo FT /locus_tag="RP1-24O22.1-001" FT /product="olfactory receptor pseudogene" FT /note="match: proteins: Sw:P23273 Sw:Q9TUA2 Sw:Q9UGF7 FT Tr:O77756 Tr:O77758 Tr:Q9QW37 Tr:Q9R0G2 Tr:Q9R0K2 FT Tr:Q9R0K4" FT CDS 142705..145059 FT /pseudo FT /locus_tag="RP1-24O22.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q96RK0" FT mRNA complement(join(<131910..132117,140211..140379, FT 144536..144885)) FT /locus_tag="RP1-24O22.4-001" FT /product="chromosome 6 open reading frame 88" FT /note="match: cDNAs: Em:BC118988.1 Em:BC122537.1" FT misc_feature 144702 FT /note="Clone_left_end: RP3-416J7" FT misc_feature 146702..268735 FT /note="annotated region of clone" FT mRNA join(155135..155395,156119..156514,156546..156639) FT /locus_tag="RP3-416J7.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BQ006499" FT CDS complement(join(167607..167826,169545..169753, FT 170352..170631)) FT /pseudo FT /locus_tag="RP3-416J7.1-002" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q9UPS8 Sw:Q9UPS8 Sw:Q9UPS8 FT Tr:O60311 Tr:Q96LT0" FT mRNA join(224950..225088,225686..226068,226079..226400) FT /locus_tag="RP3-416J7.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:H99640" FT misc_feature 266735 FT /note="Clone_right_end: RP3-416J7" FT misc_feature 268736..401084 FT /note="annotated region of clone" FT mRNA join(292097..292560,304628..304661,311880..311962, FT 335114..335163,345854..345928,348103..348274, FT 348769..348841,350822..351355) FT /gene="DUSP22" FT /locus_tag="RP11-328C17.1-001" FT /product="dual specificity phosphatase 22" FT /note="match: ESTs: Em:AA374753 Em:AV714942 Em:AV764304 FT Em:AV764531 Em:AW385663 Em:AW963729 Em:BB851915 Em:BE407119 FT Em:BE796998 Em:BE854383 Em:BF171344 Em:BG532390 Em:BG545679 FT Em:BG674814 Em:BG697122 Em:BI115928 Em:BI460715 FT Em:BM018391" FT /note="match: cDNAs: Em:AF165519.1 Em:AF237619.1 FT Em:AF424702.1 Em:BC016844.1 Em:BC022847.1" FT misc_feature 292131..292136 FT /note="Weak data" FT CDS join(292540..292560,304628..304661,311880..311962, FT 335114..335163,345854..345928,348103..348274, FT 348769..348841,350822..350868) FT /gene="DUSP22" FT /locus_tag="RP11-328C17.1-001" FT /standard_name="OTTHUMP00000015938" FT /product="dual specificity phosphatase 22" FT /note="match: proteins: Sw:Q99N11 Sw:Q9H1R2 Sw:Q9NRW4 FT Sw:Q9NRW4 Sw:Q9NRW4" FT /protein_id="CAH72534.1" FT /translation="MGNGMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPML FT EGVKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIM FT TVTDFGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAE FT EAKNILAAPGILKFWAFLRRL" FT misc_feature 329778 FT /note="Clone_right_end: RP1-125A24" FT misc_feature 333428 FT /note="Clone_left_end: RP11-233K4" FT CDS join(<345854..345928,348103..348274,348769..348951) FT /codon_start=2 FT /gene="DUSP22" FT /locus_tag="RP11-328C17.1-002" FT /standard_name="OTTHUMP00000015939" FT /product="dual specificity phosphatase 22" FT /note="match: proteins: Sw:Q99N11 Sw:Q9H1R2 Sw:Q9NRW4 FT Sw:Q9NRW4 Sw:Q9NRW4" FT /protein_id="CAH72535.1" FT /translation="TRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTD FT FGWEDALHTVRAGRSCANPNVGFQRQLQEFEKHEVHQYRQWLKEEYGESPLQDAEEAKN FT ILGKYKEQGRTEPQPGARRWSSFPALAPLTYDNYTTET" FT mRNA join(<345854..345928,348103..348274,348769..350719) FT /gene="DUSP22" FT /locus_tag="RP11-328C17.1-002" FT /product="dual specificity phosphatase 22" FT /note="match: ESTs: Em:BB855516 Em:BE292273 Em:BG862745 FT Em:BI829670" FT /note="match: cDNAs: Em:AK000383.1 Em:BC009209.1" FT polyA_signal 350680..350685 FT polyA_site 350719 FT polyA_signal 351329..351334 FT polyA_site 351356 FT mRNA join(391739..391809,393098..393368,394821..395007, FT 395847..395935,397108..397252,398828..398935, FT AL589962.3:440..793,AL589962.3:4034..4146, FT AL589962.3:6471..6994,AL512308.19:101..3569) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-001" FT /product="interferon regulatory factor 4" FT /note="match: ESTs: Em:AA227821 Em:AA227826 Em:AA227995 FT Em:AA228000 Em:AA255768 Em:AA256962 Em:AA352644 Em:AA352646 FT Em:AA743459 Em:AA777107 Em:AA805463 Em:AA825491 Em:AA847145 FT Em:AA890070 Em:AA932532 Em:AI041586 Em:AI074662 Em:AI087048 FT Em:AI125911 Em:AI224145 Em:AI224170 Em:AI240401 Em:AI276258 FT Em:AI298459 Em:AI399998 Em:AI435897 Em:AI439541 Em:AI492884 FT Em:AI493396 Em:AI636770 Em:AI637640 Em:AI688478 Em:AI765428 FT Em:AI824002 Em:AI916794 Em:AI968877 Em:AI970311 Em:AV716074 FT Em:AW138914 Em:AW197089 Em:AW205618 Em:AW235163 Em:AW291175 FT Em:AW296928 Em:AW381844 Em:AW381870 Em:AW388126 Em:AW388135 FT Em:AW388141 Em:AW407522 Em:AW449082 Em:AW450909 Em:AW452687 FT Em:AW503655 Em:AW590953 Em:AW593484 Em:AW732768 Em:AW809864 FT Em:AW809981 Em:AW955078 Em:BE151052 Em:BE208763 Em:BE276288 FT Em:BE300509 Em:BE302597 Em:BE384354 Em:BE386517 Em:BE502985 FT Em:BE536140 Em:BE551705 Em:BE727362 Em:BE728571 Em:BE729000 FT Em:BE729080 Em:BE830408 Em:BE830418 Em:BE842120 Em:BE842128 FT Em:BE842131 Em:BE842160 Em:BE842244 Em:BE842281 Em:BE937369 FT Em:BE937371 Em:BF027204 Em:BF128693 Em:BF170439 Em:BF507845 FT Em:BF508361 Em:BF508751 Em:BF510753 Em:BF511178 Em:BF511418 FT Em:BF511457 Em:BF512124 Em:BF512196 Em:BF512477 Em:BF689480 FT Em:BF690003 Em:BF690079 Em:BF882915 Em:BG230623 Em:BG281851 FT Em:BG282441 Em:BG334755 Em:BG390289 Em:BG398032 Em:BG475084 FT Em:BG476158 Em:BG476391 Em:BG758361 Em:BG760303 Em:BG761644 FT Em:BG762018 Em:BG763676 Em:BG764137 Em:BG765760 Em:BG768296 FT Em:BG768699 Em:BG769840 Em:BI226607 Em:BI906893 Em:H98794 FT Em:N22777 Em:N25007 Em:N33409 Em:N33454 Em:N33910 Em:N35268 FT Em:N39628 Em:N42427 Em:N44872 Em:N67844 Em:R17056 Em:R17057 FT Em:T93628 Em:T93677 Em:W03449" FT /note="match: cDNAs: Em:AF320331.1 Em:AF320332.1 FT Em:BC015752.1 Em:U11692.1 Em:U34307.1 Em:U52682.1 FT Em:U63738.1" FT mRNA join(391752..391809,394821..395007,395847..396074) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-003" FT /product="interferon regulatory factor 4" FT /note="match: ESTs: Em:BM152064" FT mRNA join(391768..391809,393098..393368,394821..395007, FT 395847..395935,397108..397252,398828..398935, FT AL589962.3:440..793,AL589962.3:4034..4146, FT AL589962.3:5782..5915,AL589962.3:6471..6634) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-005" FT /product="interferon regulatory factor 4" FT /note="match: cDNAs: Em:D78261" FT mRNA join(391768..391809,394821..395007,395847..395935, FT 397108..397546) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-002" FT /product="interferon regulatory factor 4" FT /note="match: ESTs: Em:BI906893" FT CDS join(393153..393368,394821..395007,395847..395935, FT 397108..397252,398828..398935,AL589962.3:440..793, FT AL589962.3:4034..4146,AL589962.3:6471..6614) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-001" FT /standard_name="OTTHUMP00000017905" FT /product="interferon regulatory factor 4" FT /note="match: proteins: Sw:Q15306 Sw:Q64287 Tr:Q98TX7 FT Tr:Q99419" FT /protein_id="CAH72537.1" FT /translation="MNLEGGGRGGEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENE FT EKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKS FT NDFEELVERSQLDISDPYKVYRIVPEGAKKGAKQLTLEDPQMSMSHPYTMTTPYPSLPA FT QQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTFGPRGHHWQGPACENGCQVTGTFYA FT CAPPESQAPGVPTEPSIRSAEALAFSDCRLHICLYYREILVKELTTSSPEGCRISHGHT FT YDASNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPL FT ALCNDRPNKLERDQTCKLFDTQQFLSELQAFAHHGRSLPRFQVTLCFGEEFPDPQRQRK FT LITAHVEPLLARQLYYFAQQNSGHFLRGYDLPEHISNPEDYHRSIRHSSIQE" FT mRNA join(393279..393368,394821..395007,395847..395915) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-004" FT /product="interferon regulatory factor 4" FT /note="match: ESTs: Em:BF882915" FT misc_feature 393323..393325 FT /note="Weak data" FT misc_feature 393403..393404 FT /note="Weak data" FT misc_feature 400984 FT /note="Clone_right_end: RP11-328C17" FT misc_feature 401085..407978 FT /note="annotated region of clone" FT misc_feature 407779 FT /note="Clone_left_end: RP11-164H16" FT mRNA join(AL365272.20:123104..123174,AL365272.20:124463..124733, FT AL365272.20:126186..126372,AL365272.20:127212..127300, FT AL365272.20:128473..128617,AL365272.20:130193..130300, FT 401424..401777,405018..405130,407455..407978, FT AL512308.19:101..3569) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-001" FT /product="interferon regulatory factor 4" FT /note="match: ESTs: Em:AA227821 Em:AA227826 Em:AA227995 FT Em:AA228000 Em:AA255768 Em:AA256962 Em:AA352644 Em:AA352646 FT Em:AA743459 Em:AA777107 Em:AA805463 Em:AA825491 Em:AA847145 FT Em:AA890070 Em:AA932532 Em:AI041586 Em:AI074662 Em:AI087048 FT Em:AI125911 Em:AI224145 Em:AI224170 Em:AI240401 Em:AI276258 FT Em:AI298459 Em:AI399998 Em:AI435897 Em:AI439541 Em:AI492884 FT Em:AI493396 Em:AI636770 Em:AI637640 Em:AI688478 Em:AI765428 FT Em:AI824002 Em:AI916794 Em:AI968877 Em:AI970311 Em:AV716074 FT Em:AW138914 Em:AW197089 Em:AW205618 Em:AW235163 Em:AW291175 FT Em:AW296928 Em:AW381844 Em:AW381870 Em:AW388126 Em:AW388135 FT Em:AW388141 Em:AW407522 Em:AW449082 Em:AW450909 Em:AW452687 FT Em:AW503655 Em:AW590953 Em:AW593484 Em:AW732768 Em:AW809864 FT Em:AW809981 Em:AW955078 Em:BE151052 Em:BE208763 Em:BE276288 FT Em:BE300509 Em:BE302597 Em:BE384354 Em:BE386517 Em:BE502985 FT Em:BE536140 Em:BE551705 Em:BE727362 Em:BE728571 Em:BE729000 FT Em:BE729080 Em:BE830408 Em:BE830418 Em:BE842120 Em:BE842128 FT Em:BE842131 Em:BE842160 Em:BE842244 Em:BE842281 Em:BE937369 FT Em:BE937371 Em:BF027204 Em:BF128693 Em:BF170439 Em:BF507845 FT Em:BF508361 Em:BF508751 Em:BF510753 Em:BF511178 Em:BF511418 FT Em:BF511457 Em:BF512124 Em:BF512196 Em:BF512477 Em:BF689480 FT Em:BF690003 Em:BF690079 Em:BF882915 Em:BG230623 Em:BG281851 FT Em:BG282441 Em:BG334755 Em:BG390289 Em:BG398032 Em:BG475084 FT Em:BG476158 Em:BG476391 Em:BG758361 Em:BG760303 Em:BG761644 FT Em:BG762018 Em:BG763676 Em:BG764137 Em:BG765760 Em:BG768296 FT Em:BG768699 Em:BG769840 Em:BI226607 Em:BI906893 Em:H98794 FT Em:N22777 Em:N25007 Em:N33409 Em:N33454 Em:N33910 Em:N35268 FT Em:N39628 Em:N42427 Em:N44872 Em:N67844 Em:R17056 Em:R17057 FT Em:T93628 Em:T93677 Em:W03449" FT /note="match: cDNAs: Em:AF320331.1 Em:AF320332.1 FT Em:BC015752.1 Em:U11692.1 Em:U34307.1 Em:U52682.1 FT Em:U63738.1" FT mRNA join(AL365272.20:123133..123174,AL365272.20:124463..124733, FT AL365272.20:126186..126372,AL365272.20:127212..127300, FT AL365272.20:128473..128617,AL365272.20:130193..130300, FT 401424..401777,405018..405130,406766..406899, FT 407455..407618) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-005" FT /product="interferon regulatory factor 4" FT /note="match: cDNAs: Em:D78261" FT CDS join(AL365272.20:124518..124733,AL365272.20:126186..126372, FT AL365272.20:127212..127300,AL365272.20:128473..128617, FT AL365272.20:130193..130300,401424..401777,405018..405130, FT 407455..407598) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-001" FT /standard_name="OTTHUMP00000017905" FT /product="interferon regulatory factor 4" FT /note="match: proteins: Sw:Q15306 Sw:Q64287 Tr:Q98TX7 FT Tr:Q99419" FT /protein_id="CAH71554.1" FT /translation="MNLEGGGRGGEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENE FT EKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKS FT NDFEELVERSQLDISDPYKVYRIVPEGAKKGAKQLTLEDPQMSMSHPYTMTTPYPSLPA FT QQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTFGPRGHHWQGPACENGCQVTGTFYA FT CAPPESQAPGVPTEPSIRSAEALAFSDCRLHICLYYREILVKELTTSSPEGCRISHGHT FT YDASNLDQVLFPYPEDNGQRKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPL FT ALCNDRPNKLERDQTCKLFDTQQFLSELQAFAHHGRSLPRFQVTLCFGEEFPDPQRQRK FT LITAHVEPLLARQLYYFAQQNSGHFLRGYDLPEHISNPEDYHRSIRHSSIQE" FT misc_feature 407979..515333 FT /note="annotated region of clone" FT polyA_signal 411419..411424 FT polyA_site 411447 FT mRNA complement(join(485133..486764,488979..489038, FT 491125..491186,497367..497489,499645..499700, FT AL031770.12:19136..19277,AL031770.12:35842..35958, FT AL031770.12:40521..40587,AL031770.12:41894..41955, FT AL031770.12:42621..42680,AL031770.12:43151..43231, FT AL031770.12:49451..49512,AL031770.12:50700..50821, FT AL031770.12:51212..51369,AL031770.12:51531..51596, FT AL031770.12:59187..59311,AL031770.12:63424..63549, FT AL031770.12:79136..79254,AL031770.12:84688..84790, FT AL031770.12:85527..85608,AL031770.12:85747..85892, FT AL031770.12:96765..96845,AL031770.12:104378..104502, FT AL031770.12:106097..106210,AL031770.12:116502..116628, FT AL031770.12:119608..119784,AL031770.12:124368..124528, FT AL357054.14:39401..39493)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-002" FT /product="exocyst complex component 2" FT /note="match: ESTs: Em:AA068337 Em:AA227309 Em:AA360600 FT Em:AA371180 Em:AA386147 Em:AA826350 Em:AI242512 Em:AI290264 FT Em:AI643111 Em:AL526477 Em:AL698071 Em:AU128366 Em:AU136369 FT Em:AW352729 Em:AW503458 Em:AW816042 Em:AW816101 Em:BB623225 FT Em:BB639938 Em:BB660880 Em:BB860217 Em:BE237383 Em:BE279925 FT Em:BE477579 Em:BE787062 Em:BF094383 Em:BF739806 Em:BF906498 FT Em:BF965645 Em:BG034293 Em:BG121187 Em:BG183875 Em:BG201944 FT Em:BG219768 Em:BG256716 Em:BG382230 Em:BG391841 Em:BG951951 FT Em:BI110872 Em:BI458991 Em:BI870987 Em:BI908781 Em:BM128605 FT Em:BM257481" FT /note="match: cDNAs: Em:AF032666.1 Em:AJ414403.1 FT Em:AJ420556.1 Em:AK001888.1 Em:AK016532.1 Em:AK056564 FT Em:AK056564.1 Em:BC016918.1" FT polyA_site complement(485133) FT polyA_signal complement(485381..485386) FT misc_feature 501274 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 180bp by restriction digest data" FT misc_feature 501275..501497 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 505870 FT /note="Clone_right_end: RP11-233K4" FT misc_feature 513234 FT /note="Clone_left_end: RP1-20B11" FT mRNA join(AL365272.20:123104..123174,AL365272.20:124463..124733, FT AL365272.20:126186..126372,AL365272.20:127212..127300, FT AL365272.20:128473..128617,AL365272.20:130193..130300, FT AL589962.3:440..793,AL589962.3:4034..4146, FT AL589962.3:6471..6994,407979..411447) FT /gene="IRF4" FT /locus_tag="RP11-233K4.1-001" FT /product="interferon regulatory factor 4" FT /note="match: ESTs: Em:AA227821 Em:AA227826 Em:AA227995 FT Em:AA228000 Em:AA255768 Em:AA256962 Em:AA352644 Em:AA352646 FT Em:AA743459 Em:AA777107 Em:AA805463 Em:AA825491 Em:AA847145 FT Em:AA890070 Em:AA932532 Em:AI041586 Em:AI074662 Em:AI087048 FT Em:AI125911 Em:AI224145 Em:AI224170 Em:AI240401 Em:AI276258 FT Em:AI298459 Em:AI399998 Em:AI435897 Em:AI439541 Em:AI492884 FT Em:AI493396 Em:AI636770 Em:AI637640 Em:AI688478 Em:AI765428 FT Em:AI824002 Em:AI916794 Em:AI968877 Em:AI970311 Em:AV716074 FT Em:AW138914 Em:AW197089 Em:AW205618 Em:AW235163 Em:AW291175 FT Em:AW296928 Em:AW381844 Em:AW381870 Em:AW388126 Em:AW388135 FT Em:AW388141 Em:AW407522 Em:AW449082 Em:AW450909 Em:AW452687 FT Em:AW503655 Em:AW590953 Em:AW593484 Em:AW732768 Em:AW809864 FT Em:AW809981 Em:AW955078 Em:BE151052 Em:BE208763 Em:BE276288 FT Em:BE300509 Em:BE302597 Em:BE384354 Em:BE386517 Em:BE502985 FT Em:BE536140 Em:BE551705 Em:BE727362 Em:BE728571 Em:BE729000 FT Em:BE729080 Em:BE830408 Em:BE830418 Em:BE842120 Em:BE842128 FT Em:BE842131 Em:BE842160 Em:BE842244 Em:BE842281 Em:BE937369 FT Em:BE937371 Em:BF027204 Em:BF128693 Em:BF170439 Em:BF507845 FT Em:BF508361 Em:BF508751 Em:BF510753 Em:BF511178 Em:BF511418 FT Em:BF511457 Em:BF512124 Em:BF512196 Em:BF512477 Em:BF689480 FT Em:BF690003 Em:BF690079 Em:BF882915 Em:BG230623 Em:BG281851 FT Em:BG282441 Em:BG334755 Em:BG390289 Em:BG398032 Em:BG475084 FT Em:BG476158 Em:BG476391 Em:BG758361 Em:BG760303 Em:BG761644 FT Em:BG762018 Em:BG763676 Em:BG764137 Em:BG765760 Em:BG768296 FT Em:BG768699 Em:BG769840 Em:BI226607 Em:BI906893 Em:H98794 FT Em:N22777 Em:N25007 Em:N33409 Em:N33454 Em:N33910 Em:N35268 FT Em:N39628 Em:N42427 Em:N44872 Em:N67844 Em:R17056 Em:R17057 FT Em:T93628 Em:T93677 Em:W03449" FT /note="match: cDNAs: Em:AF320331.1 Em:AF320332.1 FT Em:BC015752.1 Em:U11692.1 Em:U34307.1 Em:U52682.1 FT Em:U63738.1" FT CDS complement(join(486671..486764,488979..489038, FT 491125..491186,497367..497489,499645..499700, FT AL031770.12:19136..19277,AL031770.12:35842..35958, FT AL031770.12:40521..40587,AL031770.12:41894..41955, FT AL031770.12:42621..42680,AL031770.12:43151..43231, FT AL031770.12:49451..49512,AL031770.12:50700..50821, FT AL031770.12:51212..51369,AL031770.12:51531..51596, FT AL031770.12:59187..59311,AL031770.12:63424..63549, FT AL031770.12:79136..79254,AL031770.12:84688..84790, FT AL031770.12:85527..85608,AL031770.12:85747..85892, FT AL031770.12:96765..96845,AL031770.12:104378..104502, FT AL031770.12:106097..106210,AL031770.12:116502..116628, FT AL031770.12:119608..119784,AL031770.12:124368..124485)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-002" FT /standard_name="OTTHUMP00000164193" FT /product="exocyst complex component 2" FT /note="match: proteins: Sw:O54921 Sw:Q22706 Sw:Q96KP1 FT Sw:Q9D4H1 Sw:Q9VQQ9" FT /protein_id="CAH70772.1" FT /translation="MSRSRQPPLVTGISPNEGIPWTKVTIRGENLGTGPTDLIGLTICG FT HNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKSGGRGTSTVSFKLLKPEKIGILDQS FT AVWVDEMNYYDMRTDRNKGIPPLSLRPANPLGIEIEKSKFSQKDLEMLFHGMSADFTSE FT NFSAAWYLIENHSNTSFEQLKMAVTNLKRQANKKSEGSLAYVKGGLSTFFEAQDALSAI FT HQKLEADGTEKVEGSMTQKLENVLNRASNTADTLFQEVLGRKDKADSTRNALNVLQRFK FT FLFNLPLNIERNIQKGDYDVVINDYEKAKSLFGKTEVQVFKKYYAEVETRIEALRELLL FT DKLLETPSTLHDQKRYIRYLSDLHASGDPAWQCIGAQHKWILQLMHSCKEGYVKDLKGN FT PGLHSPMLDLDNDTRPSVLGHLSQTASLKRGSSFQSGRDDTWRYKTPHRVAFVEKLTKL FT VLSQLPNFWKLWISYVNGSLFSETAEKSGQIERSKNVRQRQNDFKKMIQEVMHSLVKLT FT RGALLPLSIRDGEAKQYGGWEVKCELSGQWLAHAIQTVRLTHESLTALEIPNDLLQTIQ FT DLILDLRVRCVMATLQHTAEEIKRLAEKEDWIVDNEGLTSLPCQFEQCIVCSLQSLKGV FT LECKPGEASVFQQPKTQEEVCQLSINIMQVFIYCLEQLSTKPDADIDTTHLSVDVSSPD FT LFGSIHEDFSLTSEQRLLIVLSNCCYLERHTFLNIAEHFEKHNFQGIEKITQVSMASLK FT ELDQRLFENYIELKADPIVGSLEPGIYAGYFDWKDCLPPTGVRNYLKEALVNIIAVHAE FT VFTISKELVPRVLSKVIEAVSEELSRLMQCVSSFSKNGALQARLEICALRDTVAVYLTP FT ESKSSFKQALEALPQLSSGADKKLLEELLNKFKSSMHLQLTCFQAASSTMMKT" FT misc_feature 515334..653718 FT /note="annotated region of clone" FT misc_feature 517650 FT /note="Tandem repeat. low quality base" FT misc_feature 517776 FT /note="Tandem repeat. low quality base" FT misc_feature 519096..519119 FT /note="Tandem repeat. Forced join. Estimated 500bp missing FT according to restriction digest" FT mRNA join(524171..524312,524873..525581) FT /locus_tag="RP1-20B11.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG188830 Em:BG197555 Em:BG199119 FT Em:BG207980" FT mRNA complement(join(AL512308.19:77255..78886, FT AL512308.19:81101..81160,AL512308.19:83247..83308, FT AL512308.19:89489..89611,AL512308.19:91767..91822, FT 532469..532610,549175..549291,553854..553920, FT 555227..555288,555954..556013,556484..556564, FT 562784..562845,564033..564154,564545..564702, FT 564864..564929,572520..572644,576757..576882, FT 592469..592587,598021..598123,598860..598941, FT 599080..599225,610098..610178,617711..617835, FT 619430..619543,629835..629961,632941..633117, FT 637701..637861,AL357054.14:39401..39493)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-002" FT /product="exocyst complex component 2" FT /note="match: ESTs: Em:AA068337 Em:AA227309 Em:AA360600 FT Em:AA371180 Em:AA386147 Em:AA826350 Em:AI242512 Em:AI290264 FT Em:AI643111 Em:AL526477 Em:AL698071 Em:AU128366 Em:AU136369 FT Em:AW352729 Em:AW503458 Em:AW816042 Em:AW816101 Em:BB623225 FT Em:BB639938 Em:BB660880 Em:BB860217 Em:BE237383 Em:BE279925 FT Em:BE477579 Em:BE787062 Em:BF094383 Em:BF739806 Em:BF906498 FT Em:BF965645 Em:BG034293 Em:BG121187 Em:BG183875 Em:BG201944 FT Em:BG219768 Em:BG256716 Em:BG382230 Em:BG391841 Em:BG951951 FT Em:BI110872 Em:BI458991 Em:BI870987 Em:BI908781 Em:BM128605 FT Em:BM257481" FT /note="match: cDNAs: Em:AF032666.1 Em:AJ414403.1 FT Em:AJ420556.1 Em:AK001888.1 Em:AK016532.1 Em:AK056564 FT Em:AK056564.1 Em:BC016918.1" FT mRNA complement(join(<629835..629961,632941..633117, FT 637701..637861,AL357054.14:3545..3632, FT AL357054.14:35521..35594,AL357054.14:39401..39493)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-003" FT /product="exocyst complex component 2" FT /note="match: ESTs: Em:BM552020" FT CDS complement(join(AL512308.19:78793..78886, FT AL512308.19:81101..81160,AL512308.19:83247..83308, FT AL512308.19:89489..89611,AL512308.19:91767..91822, FT 532469..532610,549175..549291,553854..553920, FT 555227..555288,555954..556013,556484..556564, FT 562784..562845,564033..564154,564545..564702, FT 564864..564929,572520..572644,576757..576882, FT 592469..592587,598021..598123,598860..598941, FT 599080..599225,610098..610178,617711..617835, FT 619430..619543,629835..629961,632941..633117, FT 637701..637818)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-002" FT /standard_name="OTTHUMP00000164193" FT /product="exocyst complex component 2" FT /note="match: proteins: Sw:O54921 Sw:Q22706 Sw:Q96KP1 FT Sw:Q9D4H1 Sw:Q9VQQ9" FT /protein_id="CAI19790.1" FT /translation="MSRSRQPPLVTGISPNEGIPWTKVTIRGENLGTGPTDLIGLTICG FT HNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKSGGRGTSTVSFKLLKPEKIGILDQS FT AVWVDEMNYYDMRTDRNKGIPPLSLRPANPLGIEIEKSKFSQKDLEMLFHGMSADFTSE FT NFSAAWYLIENHSNTSFEQLKMAVTNLKRQANKKSEGSLAYVKGGLSTFFEAQDALSAI FT HQKLEADGTEKVEGSMTQKLENVLNRASNTADTLFQEVLGRKDKADSTRNALNVLQRFK FT FLFNLPLNIERNIQKGDYDVVINDYEKAKSLFGKTEVQVFKKYYAEVETRIEALRELLL FT DKLLETPSTLHDQKRYIRYLSDLHASGDPAWQCIGAQHKWILQLMHSCKEGYVKDLKGN FT PGLHSPMLDLDNDTRPSVLGHLSQTASLKRGSSFQSGRDDTWRYKTPHRVAFVEKLTKL FT VLSQLPNFWKLWISYVNGSLFSETAEKSGQIERSKNVRQRQNDFKKMIQEVMHSLVKLT FT RGALLPLSIRDGEAKQYGGWEVKCELSGQWLAHAIQTVRLTHESLTALEIPNDLLQTIQ FT DLILDLRVRCVMATLQHTAEEIKRLAEKEDWIVDNEGLTSLPCQFEQCIVCSLQSLKGV FT LECKPGEASVFQQPKTQEEVCQLSINIMQVFIYCLEQLSTKPDADIDTTHLSVDVSSPD FT LFGSIHEDFSLTSEQRLLIVLSNCCYLERHTFLNIAEHFEKHNFQGIEKITQVSMASLK FT ELDQRLFENYIELKADPIVGSLEPGIYAGYFDWKDCLPPTGVRNYLKEALVNIIAVHAE FT VFTISKELVPRVLSKVIEAVSEELSRLMQCVSSFSKNGALQARLEICALRDTVAVYLTP FT ESKSSFKQALEALPQLSSGADKKLLEELLNKFKSSMHLQLTCFQAASSTMMKT" FT CDS complement(join(<629835..629961,632941..633117, FT 637701..637818)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-003" FT /standard_name="OTTHUMP00000164194" FT /product="exocyst complex component 2" FT /protein_id="CAJ65833.1" FT /translation="MSRSRQPPLVTGISPNEGIPWTKVTIRGENLGTGPTDLIGLTICG FT HNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKSGGRGTSTVSFKLLKPEKIGILDQS FT AVWVDEMNYYDMRTDRNKGIPPLSLRPANPLGIEIE" FT misc_feature 651718 FT /note="Clone_right_end: RP1-20B11" FT misc_feature 653719..775274 FT /note="annotated region of clone" FT polyA_site complement(655939) FT mRNA complement(655939..656944) FT /gene="HUS1" FT /locus_tag="RP11-532F6.1-001" FT /product="HUS1 checkpoint homolog (S. pombe)" FT /note="match: cDNAs: Em:AF076844.1 Em:AF076845.1 FT Em:AF110393.1 Em:BC007013.1 Em:G41778.1 Em:Y16893.1 FT Em:Y16894.2" FT polyA_signal complement(655953..655958) FT CDS complement(656108..656944) FT /gene="HUS1" FT /locus_tag="RP11-532F6.1-001" FT /standard_name="OTTHUMP00000114799" FT /product="HUS1 checkpoint homolog (S. pombe)" FT /note="match: proteins: Sw:O60921 Sw:P78955 Sw:Q8BQY8 FT Tr:Q9XTN5" FT /protein_id="CAI15190.1" FT /translation="MKFRAKITGKGCLELFIHVSGTVARLAKVCVLRVRPDSLCFGPAG FT SGGLHEARLWCEVRQGAFQQFRMEGVSEDLDEIHLELTAEHLSRAARSAAGASSLKLQL FT THKRRPSLTVAVELVSSLGRARSVVHDLPVRVLPRRVWRDCLPPSLRASDASIRLPRWR FT TLRSIVERMANVGSHVLVEANLSGRMTLSIETEVVSIQSYFKNLGNPPQSAVGVPENRD FT LESMVQVRVDNRKLLQFLEGQQIHPTTALCNIWDNTLLQLVLVQEDVSLQYFIPAL" FT CDS complement(669081..670307) FT /pseudo FT /locus_tag="RP11-532F6.2-001" FT /product="serine/threonine kinase pseudogene" FT /note="match: proteins: Sw:O08678 Sw:O08679 Sw:P27448 FT Sw:Q03141 Sw:Q05512 Sw:Q9P0L2" FT mRNA complement(join(679411..679514,689139..689195)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-001" FT /product="exocyst complex component 2" FT /note="match: ESTs: Em:BE092837" FT mRNA complement(join(AL512308.19:77255..78886, FT AL512308.19:81101..81160,AL512308.19:83247..83308, FT AL512308.19:89489..89611,AL512308.19:91767..91822, FT AL031770.12:19136..19277,AL031770.12:35842..35958, FT AL031770.12:40521..40587,AL031770.12:41894..41955, FT AL031770.12:42621..42680,AL031770.12:43151..43231, FT AL031770.12:49451..49512,AL031770.12:50700..50821, FT AL031770.12:51212..51369,AL031770.12:51531..51596, FT AL031770.12:59187..59311,AL031770.12:63424..63549, FT AL031770.12:79136..79254,AL031770.12:84688..84790, FT AL031770.12:85527..85608,AL031770.12:85747..85892, FT AL031770.12:96765..96845,AL031770.12:104378..104502, FT AL031770.12:106097..106210,AL031770.12:116502..116628, FT AL031770.12:119608..119784,AL031770.12:124368..124528, FT 693019..693111)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-002" FT /product="exocyst complex component 2" FT /note="match: ESTs: Em:AA068337 Em:AA227309 Em:AA360600 FT Em:AA371180 Em:AA386147 Em:AA826350 Em:AI242512 Em:AI290264 FT Em:AI643111 Em:AL526477 Em:AL698071 Em:AU128366 Em:AU136369 FT Em:AW352729 Em:AW503458 Em:AW816042 Em:AW816101 Em:BB623225 FT Em:BB639938 Em:BB660880 Em:BB860217 Em:BE237383 Em:BE279925 FT Em:BE477579 Em:BE787062 Em:BF094383 Em:BF739806 Em:BF906498 FT Em:BF965645 Em:BG034293 Em:BG121187 Em:BG183875 Em:BG201944 FT Em:BG219768 Em:BG256716 Em:BG382230 Em:BG391841 Em:BG951951 FT Em:BI110872 Em:BI458991 Em:BI870987 Em:BI908781 Em:BM128605 FT Em:BM257481" FT /note="match: cDNAs: Em:AF032666.1 Em:AJ414403.1 FT Em:AJ420556.1 Em:AK001888.1 Em:AK016532.1 Em:AK056564 FT Em:AK056564.1 Em:BC016918.1" FT mRNA complement(join(AL031770.12:<116502..116628, FT AL031770.12:119608..119784,AL031770.12:124368..124528, FT 657163..657250,689139..689212,693019..693111)) FT /gene="EXOC2" FT /locus_tag="RP11-164H16.2-003" FT /product="exocyst complex component 2" FT /note="match: ESTs: Em:BM552020" FT misc_feature 697048 FT /note="Clone_left_end: RP11-284J1" FT misc_feature 736059..736247 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 775174 FT /note="Clone_right_end: RP11-532F6" FT misc_feature 832424 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1700bp by restriction digest data" FT misc_feature 836450 FT /note="Clone_left_end: RP11-391F23" FT misc_feature 882233 FT /note="Clone_right_end: RP11-284J1" FT misc_feature 888761 FT /note="Clone_left_end: RP5-1077H22" FT misc_feature complement(890861..984128) FT /note="annotated region of clone" FT mRNA complement(join(958563..958828,962375..962511)) FT /locus_tag="RP5-1077H22.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA960797.1" FT misc_feature complement(890861) FT /note="Clone_left_end: RP5-1077H22" FT misc_feature 995325 FT /note="Clone_left_end: RP5-856G1" FT misc_feature complement(995529..1147223) FT /note="annotated region of clone" FT misc_feature complement(1147176..1147180) FT /note="Single clone region" FT misc_feature complement(1088673..1088733) FT /note="Tandem repeat. Forced join. estimated size of gap is FT 1kb, according to restriction digest" FT misc_feature complement(995529) FT /note="Clone_left_end: RP5-856G1" FT misc_feature 1149247..1149248 FT /note="weak data" FT misc_feature 1152155 FT /note="weak data" FT misc_feature 1152608..1152614 FT /note="weak data" FT misc_feature 1164803..1164807 FT /note="weak data" FT misc_feature 1164871..1164951 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 1164892 FT /note="weak data" FT misc_feature 1178031..1178044 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 1179375 FT /note="Clone_left_end: RP3-483L3" FT misc_feature 1253887 FT /note="Clone_right_end: RP3-483L3" FT misc_feature 1295896 FT /note="Clone_left_end: RP11-13J16" FT misc_feature 1356758..1475188 FT /note="annotated region of clone" FT misc_feature 1389749..1389957 FT /note="Sequence confirmed by AF084938 sequenced by the FT department of Molecular Biology, Goteborg University, FT Sweden" FT mRNA join(1390069..1391353,1394931..1395832) FT /gene="FOXF2" FT /locus_tag="RP4-668J24.1-001" FT /product="forkhead box F2" FT /note="match: ESTs: Em:BG120697" FT /note="match: cDNAs: Em:AB028627.1 Em:AJ242680.1 FT Em:U13219.1 Em:U13220.1 Em:Y11148.1" FT CDS join(1390183..1391353,1394931..1395094) FT /gene="FOXF2" FT /locus_tag="RP4-668J24.1-001" FT /standard_name="OTTHUMP00000017863" FT /product="forkhead box F2" FT /note="match: proteins: Sw:O60548 Sw:P35582 Sw:Q12947 FT Sw:Q14488 Sw:Q60987 Sw:Q61080 Sw:Q63244 Sw:Q64731 Sw:Q98937 FT Sw:Q9NU39 Tr:O54743 Tr:Q9NCL2 Tr:Q9NDK9 Tr:Q9PTK2 Tr:Q9PVP9 FT Tr:Q9W5X5 Tr:Q9W707" FT /protein_id="CAI22285.1" FT /translation="MTTEGGPPPAPLRRACSPVPGALQAALMSPPPAAAAAAAAAPETT FT SSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYS FT YIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPK FT GLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGLGFGASLLP FT QGFDFQAPPSAPLGCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPG FT STYMASCPVPAGPGGVGAAGGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHW FT SSPGASPYLKQPPALTPSSNPAASAGLHSSMSSYSLEQSYLHQNAREDLSVGLPRYQHH FT STPVCDRKDFVLNFNGISSFHPSASGSYYHHHHQSVCQDIKPCVM" FT misc_feature 1390328 FT /note="Sequence confirmed by AF084938 sequenced by the FT department of Molecular Biology, Goteborg University, FT Sweden" FT polyA_signal 1395815..1395820 FT misc_feature 1427373 FT /note="Clone_left_end: RP11-157J24" FT misc_feature 1452707 FT /note="Clone_right_end: RP11-13J16" FT misc_feature 1475189..1545521 FT /note="annotated region of clone" FT misc_feature 1477188 FT /note="Clone_right_end: RP4-668J24" FT misc_feature 1478264..1478962 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT misc_feature 1478379..1478488 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT CDS complement(1513936..>1515524) FT /pseudo FT /locus_tag="RP11-157J24.1-001" FT /product="E74-like factor 2 (ets domain transcription FT factor) (ELF2) pseudogene" FT misc_feature 1542348..1542537 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT misc_feature 1545522..1650250 FT /note="annotated region of clone" FT misc_feature 1545522 FT /note="Clone_left_end: RP1-118B18" FT mRNA join(complement(AL158139.26:15959..16319), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592, FT complement(AL137179.14:135781..135973), FT complement(AL137179.14:134874..134978), FT complement(AL137179.14:105110..105237), FT complement(AL033517.1:28686..28804), FT complement(AL033517.1:12634..12730), FT complement(1624707..1624775),complement(1624041..1624466)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: ESTs: Em:AA065072 Em:AA239238 Em:AA515529 FT Em:AA577478 Em:AA607412 Em:AI181596 Em:AI322318 Em:AI324774 FT Em:AI344342 Em:AI633019 Em:AI675341 Em:AI851653 Em:AI852418 FT Em:AI928408 Em:AL524611 Em:AL524612 Em:AL527525 Em:AL532395 FT Em:AL543116 Em:AL558484 Em:AL560960 Em:AL561275 Em:AL569776 FT Em:AL582370 Em:AU076505 Em:AV602606 Em:AW009232 Em:AW071790 FT Em:AW293503 Em:AW341194 Em:AW353916 Em:AW613575 Em:BB634860 FT Em:BB662482 Em:BB868675 Em:BE258025 Em:BE304812 Em:BE395379 FT Em:BE665644 Em:BE793046 Em:BE899185 Em:BE900589 Em:BE986856 FT Em:BF079884 Em:BF158988 Em:BF303367 Em:BF348094 Em:BF579930 FT Em:BF689605 Em:BG149224 Em:BG210725 Em:BG329797 Em:BG395603 FT Em:BG469348 Em:BG761684 Em:BG762004 Em:BG824393 Em:BI078807 FT Em:BI089012 Em:BI091277 Em:BI115337 Em:BI260421 Em:BI408011 FT Em:BI675991 Em:BI833847 Em:BI859823 Em:BJ036214 Em:BJ037013 FT Em:BJ064625 Em:BJ070086 Em:BJ072924 Em:BM010993 Em:BM040770 FT Em:BM711522 Em:BQ009228 Em:W29220" FT /note="match: cDNAs: Em:AF040260 Em:AF040260.1 Em:AF042377 FT Em:AF042377.1 Em:AK057484 Em:BC000117 Em:BC000117.1" FT CDS join(complement(AL158139.26:15959..16060), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592, FT complement(AL137179.14:135781..135973), FT complement(AL137179.14:134874..134978), FT complement(AL137179.14:105110..105237), FT complement(AL033517.1:28686..28804), FT complement(AL033517.1:12634..12730), FT complement(1624707..1624775),complement(1624404..1624466)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /standard_name="OTTHUMP00000017756" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: proteins: Em:CE03093 Sw:O45583 Sw:O60547 FT Sw:O60547 Sw:O85713 Sw:P0AC91 Sw:P55354 Sw:Q06952 Sw:Q18801 FT Sw:Q56598 Sw:Q56872 Sw:Q9VMW9 Tr:O51839 Tr:O67175 Tr:O85339 FT Tr:O86297 Tr:P72586 Tr:Q56659 Tr:Q7CVV7 Tr:Q7DBF5 Tr:Q7DBF5 FT Tr:Q8U6L8 Tr:Q8VQ49 Tr:Q8VU13 Tr:Q8Z5H1 Tr:Q93Q33 Tr:Q97H33 FT Tr:Q98AU5 Tr:Q9AQ08 Tr:Q9F7A4 Tr:Q9JRN5 Tr:Q9PFP8 Tr:Q9R966 FT Tr:Q9RCB3 Tr:Q9S522 Tr:Q9XDD8 Tr:Q9Z6I3" FT /protein_id="CAI19400.1" FT /translation="MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLE FT KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE FT IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ FT EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRK FT ISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSV FT REFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAK FT QKLNWKPRVAFDELVREMVHADVELMRTNPNA" FT CDS complement(join(1624404..1624466,1624707..1624775, FT AL033517.1:12634..12730,AL033517.1:28686..28801)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-002" FT /standard_name="OTTHUMP00000017757" FT /product="GDP-mannose 4,6-dehydratase" FT /protein_id="CAI19401.1" FT /translation="MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNE FT NEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD FT VELMRTNPNA" FT mRNA 1610207..1614132 FT /gene="FOXC1" FT /locus_tag="RP1-118B18.2-001" FT /product="forkhead box C1" FT /note="match: ESTs: Em:AA977661.1 Em:AI576072.1 FT Em:AI819982.1 Em:AL641857.1 Em:AU119542.1 Em:AU119584.1 FT Em:AU137956.1 Em:AU145890.1 Em:AW195359.1 Em:BF196126.1 FT Em:BF722594.1 Em:BF940303.1 Em:BG111200.1 Em:BG429772.1 FT Em:BG497663.1 Em:BG924741.1 Em:BI412718.1 Em:BI493333.1 FT Em:BI493334.1 Em:BI493911.1 Em:BI914918.1 Em:BJ065892.1 FT Em:BM931787.1 Em:BM982226.1 Em:BQ068582.1 Em:BQ182492.1 FT Em:BQ446091.1" FT /note="match: cDNAs: Em:AF045017.1 Em:AJ242675.1 FT Em:AK021858.1 Em:L10406.1 Em:S63607.1" FT CDS 1610681..1612342 FT /gene="FOXC1" FT /locus_tag="RP1-118B18.2-001" FT /standard_name="OTTHUMP00000017802" FT /product="forkhead box C1" FT /note="match: proteins: Sw:P55315 Sw:Q12948 Sw:Q12952 FT Sw:Q61572 Sw:Q8WXT5 Sw:Q9NU39 Tr:O61733 Tr:Q9DE25 Tr:Q9DEN3 FT Tr:Q9ESM9 Tr:Q9GV73 Tr:Q9QWR9 Tr:Q9UAH4 Tr:Q9YHC5" FT /protein_id="CAB81658.1" FT /translation="MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMS FT VYSHPAHAEQYPGGMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGI FT YQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFE FT NGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVR FT IQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSAR FT PLSLDGADSAPPPPAPSAPPPHHSQGFSVDNIMTSLRGSPQSAAAELSSGLLASAAASS FT RAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQA FT MSLYAAGERGGHLQGAPGGAGGSAVDDPLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQE FT AGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAGYPGQQQNFHSVREMFESQRIG FT LNNSPVNGNSSCQMAFPSSQSLYRTSGAFVYDCSKF" FT polyA_signal 1613035..1613040 FT polyA_site 1613068 FT polyA_signal 1614104..1614109 FT polyA_site 1614132 FT polyA_site complement(1624041) FT polyA_signal complement(1624064..1624069) FT mRNA complement(join(1624109..1624466,1624707..1624775, FT 1624880..1624966)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-003" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: ESTs: Em:BM709574" FT mRNA complement(join(1624041..1624466,1624707..1624775, FT 1625332..1625735)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-005" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: cDNAs: Em:X99270" FT mRNA complement(join(1624041..1624466,1624707..1624775, FT 1626352..1626423)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-004" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: ESTs: Em:AI798916 Em:BE217912" FT misc_feature 1650250 FT /note="Clone_right_end: RP1-118B18" FT mRNA complement(join(1624041..1624466,1624707..1624775, FT AL033517.1:12634..12730,AL033517.1:28686..28804, FT AL137179.14:105110..106006)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-002" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: cDNAs: Em:AK057484.1" FT misc_feature 1650251..1714116 FT /note="annotated region of clone" FT misc_feature 1713917 FT /note="Clone_left_end: RP1-279I9" FT misc_feature 1714117..1825327 FT /note="annotated region of clone" FT mRNA join(complement(AL158139.26:15959..16319), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592, FT complement(AL137179.14:135781..135973), FT complement(AL137179.14:134874..134978), FT complement(AL137179.14:105110..105237), FT complement(1742702..1742820),complement(1726650..1726746), FT complement(AL034344.24:79186..79254), FT complement(AL034344.24:78520..78945)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: ESTs: Em:AA065072 Em:AA239238 Em:AA515529 FT Em:AA577478 Em:AA607412 Em:AI181596 Em:AI322318 Em:AI324774 FT Em:AI344342 Em:AI633019 Em:AI675341 Em:AI851653 Em:AI852418 FT Em:AI928408 Em:AL524611 Em:AL524612 Em:AL527525 Em:AL532395 FT Em:AL543116 Em:AL558484 Em:AL560960 Em:AL561275 Em:AL569776 FT Em:AL582370 Em:AU076505 Em:AV602606 Em:AW009232 Em:AW071790 FT Em:AW293503 Em:AW341194 Em:AW353916 Em:AW613575 Em:BB634860 FT Em:BB662482 Em:BB868675 Em:BE258025 Em:BE304812 Em:BE395379 FT Em:BE665644 Em:BE793046 Em:BE899185 Em:BE900589 Em:BE986856 FT Em:BF079884 Em:BF158988 Em:BF303367 Em:BF348094 Em:BF579930 FT Em:BF689605 Em:BG149224 Em:BG210725 Em:BG329797 Em:BG395603 FT Em:BG469348 Em:BG761684 Em:BG762004 Em:BG824393 Em:BI078807 FT Em:BI089012 Em:BI091277 Em:BI115337 Em:BI260421 Em:BI408011 FT Em:BI675991 Em:BI833847 Em:BI859823 Em:BJ036214 Em:BJ037013 FT Em:BJ064625 Em:BJ070086 Em:BJ072924 Em:BM010993 Em:BM040770 FT Em:BM711522 Em:BQ009228 Em:W29220" FT /note="match: cDNAs: Em:AF040260 Em:AF040260.1 Em:AF042377 FT Em:AF042377.1 Em:AK057484 Em:BC000117 Em:BC000117.1" FT CDS join(complement(AL158139.26:15959..16060), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592, FT complement(AL137179.14:135781..135973), FT complement(AL137179.14:134874..134978), FT complement(AL137179.14:105110..105237), FT complement(1742702..1742820),complement(1726650..1726746), FT complement(AL034344.24:79186..79254), FT complement(AL034344.24:78883..78945)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /standard_name="OTTHUMP00000017756" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: proteins: Em:CE03093 Sw:O45583 Sw:O60547 FT Sw:O60547 Sw:O85713 Sw:P0AC91 Sw:P55354 Sw:Q06952 Sw:Q18801 FT Sw:Q56598 Sw:Q56872 Sw:Q9VMW9 Tr:O51839 Tr:O67175 Tr:O85339 FT Tr:O86297 Tr:P72586 Tr:Q56659 Tr:Q7CVV7 Tr:Q7DBF5 Tr:Q7DBF5 FT Tr:Q8U6L8 Tr:Q8VQ49 Tr:Q8VU13 Tr:Q8Z5H1 Tr:Q93Q33 Tr:Q97H33 FT Tr:Q98AU5 Tr:Q9AQ08 Tr:Q9F7A4 Tr:Q9JRN5 Tr:Q9PFP8 Tr:Q9R966 FT Tr:Q9RCB3 Tr:Q9S522 Tr:Q9XDD8 Tr:Q9Z6I3" FT /protein_id="CAI20018.1" FT /translation="MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLE FT KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE FT IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ FT EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRK FT ISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSV FT REFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAK FT QKLNWKPRVAFDELVREMVHADVELMRTNPNA" FT CDS complement(join(AL034344.24:78883..78945, FT AL034344.24:79186..79254,1726650..1726746, FT 1742702..1742817)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-002" FT /standard_name="OTTHUMP00000017757" FT /product="GDP-mannose 4,6-dehydratase" FT /protein_id="CAI20019.1" FT /translation="MWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNE FT NEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD FT VELMRTNPNA" FT mRNA complement(join(AL034344.24:78520..78945, FT AL034344.24:79186..79254,1726650..1726746,1742702..1742820, FT AL137179.14:105110..106006)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-002" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: cDNAs: Em:AK057484.1" FT misc_feature 1825328..1976271 FT /note="annotated region of clone" FT mRNA join(complement(AL158139.26:15959..16319), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592,complement(1961008..1961200), FT complement(1960101..1960205),complement(1930337..1930464), FT complement(AL033517.1:28686..28804), FT complement(AL033517.1:12634..12730), FT complement(AL034344.24:79186..79254), FT complement(AL034344.24:78520..78945)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: ESTs: Em:AA065072 Em:AA239238 Em:AA515529 FT Em:AA577478 Em:AA607412 Em:AI181596 Em:AI322318 Em:AI324774 FT Em:AI344342 Em:AI633019 Em:AI675341 Em:AI851653 Em:AI852418 FT Em:AI928408 Em:AL524611 Em:AL524612 Em:AL527525 Em:AL532395 FT Em:AL543116 Em:AL558484 Em:AL560960 Em:AL561275 Em:AL569776 FT Em:AL582370 Em:AU076505 Em:AV602606 Em:AW009232 Em:AW071790 FT Em:AW293503 Em:AW341194 Em:AW353916 Em:AW613575 Em:BB634860 FT Em:BB662482 Em:BB868675 Em:BE258025 Em:BE304812 Em:BE395379 FT Em:BE665644 Em:BE793046 Em:BE899185 Em:BE900589 Em:BE986856 FT Em:BF079884 Em:BF158988 Em:BF303367 Em:BF348094 Em:BF579930 FT Em:BF689605 Em:BG149224 Em:BG210725 Em:BG329797 Em:BG395603 FT Em:BG469348 Em:BG761684 Em:BG762004 Em:BG824393 Em:BI078807 FT Em:BI089012 Em:BI091277 Em:BI115337 Em:BI260421 Em:BI408011 FT Em:BI675991 Em:BI833847 Em:BI859823 Em:BJ036214 Em:BJ037013 FT Em:BJ064625 Em:BJ070086 Em:BJ072924 Em:BM010993 Em:BM040770 FT Em:BM711522 Em:BQ009228 Em:W29220" FT /note="match: cDNAs: Em:AF040260 Em:AF040260.1 Em:AF042377 FT Em:AF042377.1 Em:AK057484 Em:BC000117 Em:BC000117.1" FT CDS join(complement(AL158139.26:15959..16060), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592,complement(1961008..1961200), FT complement(1960101..1960205),complement(1930337..1930464), FT complement(AL033517.1:28686..28804), FT complement(AL033517.1:12634..12730), FT complement(AL034344.24:79186..79254), FT complement(AL034344.24:78883..78945)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /standard_name="OTTHUMP00000017756" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: proteins: Em:CE03093 Sw:O45583 Sw:O60547 FT Sw:O60547 Sw:O85713 Sw:P0AC91 Sw:P55354 Sw:Q06952 Sw:Q18801 FT Sw:Q56598 Sw:Q56872 Sw:Q9VMW9 Tr:O51839 Tr:O67175 Tr:O85339 FT Tr:O86297 Tr:P72586 Tr:Q56659 Tr:Q7CVV7 Tr:Q7DBF5 Tr:Q7DBF5 FT Tr:Q8U6L8 Tr:Q8VQ49 Tr:Q8VU13 Tr:Q8Z5H1 Tr:Q93Q33 Tr:Q97H33 FT Tr:Q98AU5 Tr:Q9AQ08 Tr:Q9F7A4 Tr:Q9JRN5 Tr:Q9PFP8 Tr:Q9R966 FT Tr:Q9RCB3 Tr:Q9S522 Tr:Q9XDD8 Tr:Q9Z6I3" FT /protein_id="CAI16872.1" FT /translation="MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLE FT KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE FT IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ FT EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRK FT ISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSV FT REFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAK FT QKLNWKPRVAFDELVREMVHADVELMRTNPNA" FT misc_feature 1927361..1927380 FT /note="Tandem repeat. Forced join. Less than 1000bp missing FT according to restriction digests" FT mRNA complement(join(AL034344.24:78520..78945, FT AL034344.24:79186..79254,AL033517.1:12634..12730, FT AL033517.1:28686..28804,1930337..1931233)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-002" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: cDNAs: Em:AK057484.1" FT misc_feature 1976272..2051541 FT /note="annotated region of clone" FT misc_feature 1978271 FT /note="Clone_right_end: RP11-82M9" FT misc_feature 2010194..2010518 FT /note="Sequence from reads from a short insert library FT derived from a single pUC clone. Restriction digest data FT confirm the assembly" FT misc_feature 2023031..2023120 FT /note="Sequence from reads from a short insert library FT derived from a single pUC clone. Restriction digest data FT confirm the assembly" FT misc_feature 2025624..2025735 FT /note="Sequence from reads from a short insert library FT derived from a single pUC clone. Restriction digest data FT confirm the assembly" FT misc_feature 2049542 FT /note="Clone_left_end: RP1-206F19" FT misc_feature 2051542..2088889 FT /note="annotated region of clone" FT misc_feature 2086790 FT /note="Clone_left_end: RP1-33B19" FT misc_feature complement(2088890..2231596) FT /note="annotated region of clone" FT mRNA complement(join(AL034344.24:78520..78945, FT AL034344.24:79186..79254,AL033517.1:12634..12730, FT AL033517.1:28686..28804,AL137179.14:105110..105237, FT AL137179.14:134874..134978,AL137179.14:135781..135973, FT 2116005..2116114,2117703..2117790,2124921..2124965, FT AL158139.26:15959..16319)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: ESTs: Em:AA065072 Em:AA239238 Em:AA515529 FT Em:AA577478 Em:AA607412 Em:AI181596 Em:AI322318 Em:AI324774 FT Em:AI344342 Em:AI633019 Em:AI675341 Em:AI851653 Em:AI852418 FT Em:AI928408 Em:AL524611 Em:AL524612 Em:AL527525 Em:AL532395 FT Em:AL543116 Em:AL558484 Em:AL560960 Em:AL561275 Em:AL569776 FT Em:AL582370 Em:AU076505 Em:AV602606 Em:AW009232 Em:AW071790 FT Em:AW293503 Em:AW341194 Em:AW353916 Em:AW613575 Em:BB634860 FT Em:BB662482 Em:BB868675 Em:BE258025 Em:BE304812 Em:BE395379 FT Em:BE665644 Em:BE793046 Em:BE899185 Em:BE900589 Em:BE986856 FT Em:BF079884 Em:BF158988 Em:BF303367 Em:BF348094 Em:BF579930 FT Em:BF689605 Em:BG149224 Em:BG210725 Em:BG329797 Em:BG395603 FT Em:BG469348 Em:BG761684 Em:BG762004 Em:BG824393 Em:BI078807 FT Em:BI089012 Em:BI091277 Em:BI115337 Em:BI260421 Em:BI408011 FT Em:BI675991 Em:BI833847 Em:BI859823 Em:BJ036214 Em:BJ037013 FT Em:BJ064625 Em:BJ070086 Em:BJ072924 Em:BM010993 Em:BM040770 FT Em:BM711522 Em:BQ009228 Em:W29220" FT /note="match: cDNAs: Em:AF040260 Em:AF040260.1 Em:AF042377 FT Em:AF042377.1 Em:AK057484 Em:BC000117 Em:BC000117.1" FT CDS complement(join(AL034344.24:78883..78945, FT AL034344.24:79186..79254,AL033517.1:12634..12730, FT AL033517.1:28686..28804,AL137179.14:105110..105237, FT AL137179.14:134874..134978,AL137179.14:135781..135973, FT 2116005..2116114,2117703..2117790,2124921..2124965, FT AL158139.26:15959..16060)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /standard_name="OTTHUMP00000017756" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: proteins: Em:CE03093 Sw:O45583 Sw:O60547 FT Sw:O60547 Sw:O85713 Sw:P0AC91 Sw:P55354 Sw:Q06952 Sw:Q18801 FT Sw:Q56598 Sw:Q56872 Sw:Q9VMW9 Tr:O51839 Tr:O67175 Tr:O85339 FT Tr:O86297 Tr:P72586 Tr:Q56659 Tr:Q7CVV7 Tr:Q7DBF5 Tr:Q7DBF5 FT Tr:Q8U6L8 Tr:Q8VQ49 Tr:Q8VU13 Tr:Q8Z5H1 Tr:Q93Q33 Tr:Q97H33 FT Tr:Q98AU5 Tr:Q9AQ08 Tr:Q9F7A4 Tr:Q9JRN5 Tr:Q9PFP8 Tr:Q9R966 FT Tr:Q9RCB3 Tr:Q9S522 Tr:Q9XDD8 Tr:Q9Z6I3" FT /protein_id="CAB65990.2" FT /translation="MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLE FT KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE FT IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ FT EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRK FT ISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSV FT REFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAK FT QKLNWKPRVAFDELVREMVHADVELMRTNPNA" FT misc_feature complement(2176328..2176330) FT /note="one subclone with additional ATGA at this FT point.Sequence edited to agree with majority of reads" FT misc_feature complement(2088890) FT /note="Clone_left_end: RP1-33B19" FT misc_feature 2231597..2359999 FT /note="annotated region of clone" FT misc_feature 2243940..2243960 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA join(complement(2245555..2245915), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592, FT complement(AL137179.14:135781..135973), FT complement(AL137179.14:134874..134978), FT complement(AL137179.14:105110..105237), FT complement(AL033517.1:28686..28804), FT complement(AL033517.1:12634..12730), FT complement(AL034344.24:79186..79254), FT complement(AL034344.24:78520..78945)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: ESTs: Em:AA065072 Em:AA239238 Em:AA515529 FT Em:AA577478 Em:AA607412 Em:AI181596 Em:AI322318 Em:AI324774 FT Em:AI344342 Em:AI633019 Em:AI675341 Em:AI851653 Em:AI852418 FT Em:AI928408 Em:AL524611 Em:AL524612 Em:AL527525 Em:AL532395 FT Em:AL543116 Em:AL558484 Em:AL560960 Em:AL561275 Em:AL569776 FT Em:AL582370 Em:AU076505 Em:AV602606 Em:AW009232 Em:AW071790 FT Em:AW293503 Em:AW341194 Em:AW353916 Em:AW613575 Em:BB634860 FT Em:BB662482 Em:BB868675 Em:BE258025 Em:BE304812 Em:BE395379 FT Em:BE665644 Em:BE793046 Em:BE899185 Em:BE900589 Em:BE986856 FT Em:BF079884 Em:BF158988 Em:BF303367 Em:BF348094 Em:BF579930 FT Em:BF689605 Em:BG149224 Em:BG210725 Em:BG329797 Em:BG395603 FT Em:BG469348 Em:BG761684 Em:BG762004 Em:BG824393 Em:BI078807 FT Em:BI089012 Em:BI091277 Em:BI115337 Em:BI260421 Em:BI408011 FT Em:BI675991 Em:BI833847 Em:BI859823 Em:BJ036214 Em:BJ037013 FT Em:BJ064625 Em:BJ070086 Em:BJ072924 Em:BM010993 Em:BM040770 FT Em:BM711522 Em:BQ009228 Em:W29220" FT /note="match: cDNAs: Em:AF040260 Em:AF040260.1 Em:AF042377 FT Em:AF042377.1 Em:AK057484 Em:BC000117 Em:BC000117.1" FT CDS join(complement(2245555..2245656), FT AL035693.19:106632..106676,AL035693.19:113807..113894, FT AL035693.19:115483..115592, FT complement(AL137179.14:135781..135973), FT complement(AL137179.14:134874..134978), FT complement(AL137179.14:105110..105237), FT complement(AL033517.1:28686..28804), FT complement(AL033517.1:12634..12730), FT complement(AL034344.24:79186..79254), FT complement(AL034344.24:78883..78945)) FT /gene="GMDS" FT /locus_tag="RP1-118B18.1-001" FT /standard_name="OTTHUMP00000017756" FT /product="GDP-mannose 4,6-dehydratase" FT /note="match: proteins: Em:CE03093 Sw:O45583 Sw:O60547 FT Sw:O60547 Sw:O85713 Sw:P0AC91 Sw:P55354 Sw:Q06952 Sw:Q18801 FT Sw:Q56598 Sw:Q56872 Sw:Q9VMW9 Tr:O51839 Tr:O67175 Tr:O85339 FT Tr:O86297 Tr:P72586 Tr:Q56659 Tr:Q7CVV7 Tr:Q7DBF5 Tr:Q7DBF5 FT Tr:Q8U6L8 Tr:Q8VQ49 Tr:Q8VU13 Tr:Q8Z5H1 Tr:Q93Q33 Tr:Q97H33 FT Tr:Q98AU5 Tr:Q9AQ08 Tr:Q9F7A4 Tr:Q9JRN5 Tr:Q9PFP8 Tr:Q9R966 FT Tr:Q9RCB3 Tr:Q9S522 Tr:Q9XDD8 Tr:Q9Z6I3" FT /protein_id="CAI22880.1" FT /translation="MAHAPARCPSARGSGDGEMGKPRNVALITGITGQDGSYLAEFLLE FT KGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE FT IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ FT EIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRK FT ISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSV FT REFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAK FT QKLNWKPRVAFDELVREMVHADVELMRTNPNA" FT mRNA join(2246032..2246164,2249071..2249160,2263835..2263918, FT 2269932..2270033,2272050..2273651,2283733..2284008) FT /locus_tag="RP1-80B9.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK023629" FT misc_feature 2277884 FT /note="Clone_left_end: RP1-195P22" FT misc_feature 2305183..2305204 FT /note="Sequence from overlapping clone RP1-195P22 FT (AL591120). Assembly confirmed by restriction digest" FT misc_feature 2357999 FT /note="Clone_right_end: RP1-80B9" FT misc_feature 2371410 FT /note="Clone_left_end: RP1-136B1" FT misc_feature 2376381..2376384 FT /note="Tandem repeat. Forced join. Estimated to be approx FT 700 bases missing, according to restriction digest" FT misc_feature 2468023 FT /note="Clone_right_end: RP1-136B1" FT misc_feature 2504931..2504933 FT /note="Sequence confirmed by AC023007 sequenced by WIBR" FT misc_feature 2505020 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT 400bp from restriction digest data" FT misc_feature 2588336 FT /note="Clone_left_end: RP11-145H9" FT misc_feature 2588536..2696323 FT /note="annotated region of clone" FT CDS complement(2623673..2624056) FT /gene="RP11-145H9.2" FT /locus_tag="RP11-145H9.2-001" FT /standard_name="OTTHUMP00000015942" FT /product="novel protein" FT /note="match: proteins: Sw:Q96MT4" FT /protein_id="CAI12219.1" FT /translation="MIYPLDLFRNIPWKQGKCFASLSPEGERAFDGMEPLCQPGARPAL FT RGLQHASDCYRLLSPPGSGLVGTNPSVPAPSPHCGCCQAWSISSFTFTGPTPFKINSDQ FT ATPCHLRSPETIFRQREISNEAF" FT misc_feature 2626093 FT /note="Clone_right_end: RP11-299J5" FT mRNA complement(join(2622147..2624353,2633839..2634026, FT 2634799..2634837)) FT /gene="RP11-145H9.2" FT /locus_tag="RP11-145H9.2-001" FT /product="novel protein" FT mRNA join(2637170..2637689,2639922..2640235) FT /locus_tag="RP11-145H9.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM553903" FT CDS complement(join(2671535..2671582,2675281..2675359, FT 2678454..2678606,2679514..2679642,2680455..2680525, FT 2683255..2683396,2685530..2685639,2685717..2685810, FT 2689085..2689190,2693018..2693093, FT AL139092.12:53147..53305)) FT /locus_tag="RP11-145H9.1-001" FT /standard_name="OTTHUMP00000015941" FT /product="novel protein similar to myosin light chain FT kinase" FT /protein_id="CAI12221.2" FT /translation="MLKVKRLEEFNTCYNSNQLEKMAFFQCREEVEKVKCFLEKNSGDQ FT DSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFY FT TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL FT IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY FT ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVS FT FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK FT LLIKEKSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK" FT mRNA complement(join(2663871..2668133,2671510..2671582, FT 2675281..2675359,2678454..2678606,2679514..2679642, FT 2680455..2680525,2683255..2683396,2685530..2685639, FT 2685717..2685810,2689085..2689190,2693018..2693093, FT AL139092.12:53147..53417,AL139092.12:54747..54977)) FT /locus_tag="RP11-145H9.1-001" FT /product="novel protein similar to myosin light chain FT kinase" FT /note="match: ESTs: Em:BU675945.1 Em:DA895195.1" FT /note="match: cDNAs: Em:BX647582.1" FT polyA_site complement(2663863) FT polyA_signal complement(2663886..2663891) FT misc_feature 2694659 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 700bp by restriction digest data" FT misc_feature 2696124 FT /note="Clone_left_end: RP11-420G6" FT misc_feature 2696324..2864370 FT /note="annotated region of clone" FT mRNA complement(join(2854891..2855924,2858145..2858480, FT AL133351.34:12257..12474)) FT /locus_tag="RP11-420G6.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA381008 Em:AI347139 Em:AW204940 FT Em:AW748398 Em:BE062156 Em:BE062317 Em:BF746276 Em:BI059072 FT Em:BI194708 Em:R99526" FT CDS complement(join(AL138876.23:83100..83147, FT AL138876.23:86846..86924,AL138876.23:90019..90171, FT AL138876.23:91079..91207,AL138876.23:92020..92090, FT AL138876.23:94820..94961,AL138876.23:97095..97204, FT AL138876.23:97282..97375,AL138876.23:100650..100755, FT AL138876.23:104583..104658,2749370..2749528)) FT /locus_tag="RP11-145H9.1-001" FT /standard_name="OTTHUMP00000015941" FT /product="novel protein similar to myosin light chain FT kinase" FT /protein_id="CAH73662.1" FT /translation="MLKVKRLEEFNTCYNSNQLEKMAFFQCREEVEKVKCFLEKNSGDQ FT DSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFY FT TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL FT IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY FT ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVS FT FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK FT LLIKEKSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK" FT mRNA complement(join(AL138876.23:75436..79698, FT AL138876.23:83075..83147,AL138876.23:86846..86924, FT AL138876.23:90019..90171,AL138876.23:91079..91207, FT AL138876.23:92020..92090,AL138876.23:94820..94961, FT AL138876.23:97095..97204,AL138876.23:97282..97375, FT AL138876.23:100650..100755,AL138876.23:104583..104658, FT 2749370..2749640,2750970..2751200)) FT /locus_tag="RP11-145H9.1-001" FT /product="novel protein similar to myosin light chain FT kinase" FT /note="match: ESTs: Em:BU675945.1 Em:DA895195.1" FT /note="match: cDNAs: Em:BX647582.1" FT mRNA complement(join(2749422..2749640,2765581..2765826)) FT /locus_tag="RP11-420G6.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA283678 Em:AI343338" FT mRNA join(2765648..2766678,2768925..2769116,2770354..2770595, FT 2779497..2779726,2783640..2783795,2784558..2784637, FT 2785241..2785979) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-001" FT /product="Werner helicase interacting protein 1" FT /note="match: ESTs: Em:AI796729 Em:AL538689 Em:AL598440 FT Em:AV710512 Em:AW241815 Em:BG255474 Em:BI462153" FT /note="match: cDNAs: Em:AB056152.1 Em:BC010482.1" FT mRNA join(2765648..2766678,2768925..2769116,2770429..2770595, FT 2779497..2779726,2783640..2783795,2784558..2784637, FT 2785241..2785979) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-002" FT /product="Werner helicase interacting protein 1" FT /note="match: ESTs: Em:BB654005 Em:BE831240 Em:BG179232 FT Em:H67792" FT /note="match: cDNAs: Em:BC018923.1" FT CDS join(2765857..2766678,2768925..2769116,2770354..2770595, FT 2779497..2779726,2783640..2783795,2784558..2784637, FT 2785241..2785516) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-001" FT /standard_name="OTTHUMP00000015944" FT /product="Werner helicase interacting protein 1" FT /note="match: proteins: Sw:Q91XU0 Sw:Q96S55" FT /protein_id="CAH73664.1" FT /translation="MEVSGPEDDPFLSQLHQVQCPVCQQMMPAAHINSHLDRCLLLHPA FT GHAEPAAGSHRAGERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGEGEEGDDGGE FT TESRESYDAPPTPSGARLIPDFPVARSSSPGRKGSGKRPAAAAAAGSASPRSWDEAEAQ FT EEEEAVGDGDGDGDADADGEDDPGHWDADAAEAATAFGASGGGRPHPRALAAEEIRQML FT QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHII FT ASNSKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDT FT FLPHVECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGIH FT VLDSSRPTDPLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARAGLNGLQLAVLARLSSR FT KMFCKKSGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDQNA FT SLYWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGCHFIGMPECEVL FT LAQCVVYFARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGY FT KYNPMYSEPVDQEYLPEELRGVDFFKQRRC" FT CDS join(2765857..2766678,2768925..2769116,2770429..2770595, FT 2779497..2779726,2783640..2783795,2784558..2784637, FT 2785241..2785516) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-002" FT /standard_name="OTTHUMP00000015945" FT /product="Werner helicase interacting protein 1" FT /note="match: proteins: Sw:Q96S55" FT /protein_id="CAH73663.1" FT /translation="MEVSGPEDDPFLSQLHQVQCPVCQQMMPAAHINSHLDRCLLLHPA FT GHAEPAAGSHRAGERAKGPSPPGAKRRRLSESSALKQPATPTAAESSEGEGEEGDDGGE FT TESRESYDAPPTPSGARLIPDFPVARSSSPGRKGSGKRPAAAAAAGSASPRSWDEAEAQ FT EEEEAVGDGDGDGDADADGEDDPGHWDADAAEAATAFGASGGGRPHPRALAAEEIRQML FT QGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHII FT ASNSKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQVN FT AALLSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSSRPTDPLSHSSNSSSEPAMFI FT EDKAVDTLAYLSDGDARAGLNGLQLAVLARLSSRKMFCKKSGQSYSPSRVLITENDVKE FT GLQRSHILYDRAGEEHYNCISALHKSMRGSDQNASLYWLARMLEGGEDPLYVARRLVRF FT ASEDIGLADPSALTQAVAAYQGCHFIGMPECEVLLAQCVVYFARAPKSIEVYSAYNNVK FT ACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNPMYSEPVDQEYLPEELRGVDFF FT KQRRC" FT mRNA join(2766286..2766678,2768925..2769116,2770354..2770595, FT 2779497..2779726,2783640..2783795,2784558..2784637, FT 2785241..2786927) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-003" FT /product="Werner helicase interacting protein 1" FT /note="match: ESTs: Em:BE327599 Em:BE467098 Em:BF448654" FT /note="match: cDNAs: Em:AF218313.1" FT CDS join(2766517..2766678,2768925..2769116,2770354..2770595, FT 2779497..2779726,2783640..2783795,2784558..2784637, FT 2785241..2785516) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-003" FT /standard_name="OTTHUMP00000015946" FT /product="Werner helicase interacting protein 1" FT /note="match: proteins: Sw:Q96S55" FT /protein_id="CAH73665.1" FT /translation="MLQGKPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLI FT LWGPPGCGKTTLAHIIASNSKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTI FT LFIDEIHRFNKSQQDTFLPHVECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVE FT AMVTILMRAINSLGIHVLDSSRPTDPLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARA FT GLNGLQLAVLARLSSRKMFCKKSGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYN FT CISALHKSMRGSDQNASLYWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVA FT AYQGCHFIGMPECEVLLAQCVVYFARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLR FT NAPTRLMKDLGYGKGYKYNPMYSEPVDQEYLPEELRGVDFFKQRRC" FT misc_feature 2766927 FT /note="Clone_right_end: RP11-145H9" FT mRNA join(2769007..2769116,2770354..2770595,2779497..2779726, FT 2783640..2783795,2784558..2784637,2785241..2785979) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-004" FT /product="Werner helicase interacting protein 1" FT /note="match: ESTs: Em:AA379875 Em:BF691216 Em:BG119357 FT Em:BG179232 Em:BI694556" FT /note="match: cDNAs: Em:AK026179.1" FT CDS join(2770492..2770595,2779497..2779726,2783640..2783795, FT 2784558..2784637,2785241..2785516) FT /gene="WRNIP1" FT /locus_tag="RP11-420G6.2-004" FT /standard_name="OTTHUMP00000015947" FT /product="Werner helicase interacting protein 1" FT /note="match: proteins: Sw:Q96S55" FT /protein_id="CAH73666.1" FT /translation="MVTILMRAINSLGIHVLDSSRPTDPLSHSSNSSSEPAMFIEDKAV FT DTLAYLSDGDARAGLNGLQLAVLARLSSRKMFCKKSGQSYSPSRVLITENDVKEGLQRS FT HILYDRAGEEHYNCISALHKSMRGSDQNASLYWLARMLEGGEDPLYVARRLVRFASEDI FT GLADPSALTQAVAAYQGCHFIGMPECEVLLAQCVVYFARAPKSIEVYSAYNNVKACLRN FT HQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNPMYSEPVDQEYLPEELRGVDFFKQRRC FT " FT polyA_signal 2785960..2785965 FT polyA_site 2785980 FT polyA_signal 2786906..2786911 FT polyA_site 2786927 FT polyA_site complement(2832556) FT polyA_signal complement(2832589..2832594) FT polyA_site complement(2833257) FT polyA_signal complement(2833279..2833284) FT polyA_site 2833732 FT polyA_site complement(2833735) FT polyA_signal complement(2833748..2833753) FT mRNA complement(join(2833746..2833933,2836342..2836484, FT 2838116..2838233)) FT /gene="SERPINB1" FT /locus_tag="RP11-420G6.1-002" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 1" FT /note="match: ESTs: Em:AW377621" FT CDS complement(join(2833842..2834246,2836090..2836257, FT 2836342..2836484,2838116..2838233,2838783..2838920, FT 2840653..2840820)) FT /gene="SERPINB1" FT /locus_tag="RP11-420G6.1-003" FT /standard_name="OTTHUMP00000015943" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 1" FT /note="match: proteins: Sw:P30740 Tr:Q9D154 Tr:Q9D7S8" FT /protein_id="CAH73667.1" FT /translation="MEQLSSANTRFALDLFLALSENNPAGNIFISPFSISSAMAMVFLG FT TRGNTAAQLSKTFHFNTVEEVHSRFQSLNADINKRGASYILKLANRLYGEKTYNFLPEF FT LVSTQKTYGADLASVDFQHASEDARKTINQWVKGQTEGKIPELLASGMVDNMTKLVLVN FT AIYFKGNWKDKFMKEATTNAPFRLNKKDRKTVKMMYQKKKFAYGYIEDLKCRVLELPYQ FT GEELSMVILLPDDIEDESTGLKKIEEQLTLEKLHEWTKPENLDFIEVNVSLPRFKLEES FT YTLNSDLARLGVQDLFNSSKADLSGMSGARDIFISKIVHKSFVEVNEEGTEAAAATAGI FT ATFCMLMPEENFTADHPFLFFIRHNSSGSILFLGRFSSP" FT mRNA complement(join(2838783..2838920,2840653..2840828, FT 2841831..2842096)) FT /gene="SERPINB1" FT /locus_tag="RP11-420G6.1-001" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 1" FT /note="match: ESTs: Em:BM146661 Em:BM194127" FT mRNA complement(join(2832566..2834246,2836090..2836257, FT 2836342..2836484,2838116..2838233,2838783..2838920, FT 2840653..2840828,2842046..2842240)) FT /gene="SERPINB1" FT /locus_tag="RP11-420G6.1-003" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 1" FT /note="match: ESTs: Em:AA627978 Em:AI074471 Em:AI554300 FT Em:AI651260 Em:AI686584 Em:AI701599 Em:AI720275 Em:AU133981 FT Em:AW449898 Em:AW451326 Em:BE384983 Em:BE841194 Em:BE868913 FT Em:BF508964 Em:BG191068 Em:BG546972 Em:BI752629 Em:BI755582 FT Em:BI818192 Em:BI818426 Em:BI825798 Em:BI831275 Em:BM021814 FT Em:BM148764 Em:BM149497" FT /note="match: cDNAs: Em:AK008914.1 Em:AK018226.1 FT Em:BC009015.1 Em:M93056.1" FT mRNA complement(join(2836090..2836257,2836342..2836484, FT 2838116..2838233,2838783..2838920,2840653..2840719, FT 2842046..2842193)) FT /gene="SERPINB1" FT /locus_tag="RP11-420G6.1-005" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 1" FT /note="match: ESTs: Em:AA381538 Em:AW367439 Em:BG429993" FT mRNA complement(join(2836342..2836484,2838116..2838233, FT 2838783..2838920,2840653..2840828,2841450..2841709, FT 2842046..2842082)) FT /gene="SERPINB1" FT /locus_tag="RP11-420G6.1-004" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 1" FT /note="match: ESTs: Em:BI832496 Em:BI832694 Em:BI838742 FT Em:BM149440" FT polyA_site complement(2854891) FT polyA_signal complement(2854972..2854977) FT misc_feature 2864171 FT /note="Clone_left_end: RP1-90J20" FT misc_feature 2864371..3037940 FT /note="annotated region of clone" FT misc_feature 2870371 FT /note="Clone_right_end: RP11-420G6" FT mRNA complement(join(AL139092.12:158668..159701, FT AL139092.12:161922..162257,2876527..2876744)) FT /locus_tag="RP11-420G6.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA381008 Em:AI347139 Em:AW204940 FT Em:AW748398 Em:BE062156 Em:BE062317 Em:BF746276 Em:BI059072 FT Em:BI194708 Em:R99526" FT polyA_site complement(2887505) FT polyA_signal complement(2887527..2887532) FT polyA_site 2889987 FT polyA_signal complement(2890037..2890042) FT CDS complement(join(2890397..2890804,2892067..2892222, FT 2893645..2893787,2895625..2895742,2896287..2896424, FT 2900678..2900845)) FT /gene="SERPINB9" FT /locus_tag="RP1-90J20.9-001" FT /standard_name="OTTHUMP00000015954" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 9" FT /note="match: proteins: Sw:P50453" FT /protein_id="CAI23290.1" FT /translation="METLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVLLG FT AKGNTATQMAQALSLNTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLSTF FT KESCLQFYHAELKELSFIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLVLVN FT AIYFKGKWNEPFDETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYA FT RKELSLLVLLPDDGVELSTVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQEDYDME FT SVLRHLGIVDAFQQGKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAE FT CCMESGPRFCADHPFLFFIRHNRANSILFCGRFSSP" FT mRNA complement(join(2887500..2890804,2892067..2892222, FT 2893645..2893787,2895625..2895742,2896287..2896424, FT 2900678..2900855,2903435..2903514)) FT /gene="SERPINB9" FT /locus_tag="RP1-90J20.9-001" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 9" FT /note="match: ESTs: Em:AA156247 Em:AA430512 Em:AI001850 FT Em:AI653230 Em:AL542381 Em:AL569391 Em:AW378670 Em:AW384103 FT Em:AW503736 Em:BE270480 Em:BE279919 Em:BE466012 Em:BE467823 FT Em:BE735014 Em:BF513799 Em:BM126187" FT /note="match: cDNAs: Em:AF425083.1 Em:AK005394.1 FT Em:AK005491.1 Em:AK014448.1 Em:BC002538.1 Em:L40378.1 FT Em:U71364.1 Em:U96700.1" FT CDS complement(join(2910847..2910915,2912224..2912347)) FT /pseudo FT /locus_tag="RP1-90J20.10-001" FT /product="pseudogene similar to part of serine (or FT cysteine) peptidase inhibitor, clade B, member 6c FT Serpinb6c" FT /note="match: proteins: Sw:O02739.1 Sw:P50452.1" FT mRNA join(2917128..2917239,2917596..2917967) FT /locus_tag="RP1-90J20.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI685372" FT polyA_signal 2917943..2917948 FT polyA_site 2917967 FT polyA_site complement(2948393) FT polyA_signal complement(2948420..2948425) FT mRNA complement(join(2948393..2948832,2955792..2955904, FT 2959402..>2959532)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-007" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: ESTs: Em:AI635406" FT CDS complement(join(2948532..2948832,2955792..2955904, FT 2959402..>2959532)) FT /codon_start=3 FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-007" FT /standard_name="OTTHUMP00000017784" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /protein_id="CAI23291.1" FT /translation="LNLLKTLGKDNSKNVFFSPMSMSCALAMVYMGAKGNTAAQMAQIL FT SFNKSGGGGDIHQGFQSLLTEVNKTGTQYLLRMANRESYDMESVLRNLGMTDAFELGKA FT DFSGMSQTDLSLSKVVHKSFVEVNEEGTEAAAATAAIMMMRCARFVPRFCADHPFLFFI FT QHSKTNGILFCGRFSSP" FT CDS complement(join(2948532..2948933,2949148..2949303, FT 2953278..2953420,2954826..2954943,2955758..2955904, FT 2959402..2959566)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-001" FT /standard_name="OTTHUMP00000017778" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: proteins: Sw:O02739 Sw:O54759 Sw:P35237 FT Tr:Q8VHQ0" FT /protein_id="CAI23292.1" FT /translation="MDVLAEANGTFALNLLKTLGKDNSKNVFFSPMSMSCALAMVYMGA FT KGNTAAQMAQILSFNKSGGGGDIHQGFQSLLTEVNKTGTQYLLRMANRLFGEKSCDFLS FT SFRDSCQKFYQAEMEELDFISAVEKSRKHINTWVAEKTEGKIAELLSPGSVDPLTRLVL FT VNAVYFRGNWDEQFDKENTEERLFKVSKNEEKPVQMMFKQSTFKKTYIGEIFTQILVLP FT YVGKELNMIIMLPDETTDLRTVEKELTYEKFVEWTRLDMMDEEEVEVSLPRFKLEESYD FT MESVLRNLGMTDAFELGKADFSGMSQTDLSLSKVVHKSFVEVNEEGTEAAAATAAIMMM FT RCARFVPRFCADHPFLFFIQHSKTNGILFCGRFSSP" FT mRNA complement(join(2948393..2948933,2949148..2949303, FT 2953278..2953420,2954826..2954943,2955758..2955904, FT 2959402..2961561)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-002" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: ESTs: Em:AI683690 Em:AI921615 Em:AW029049 FT Em:BE169033 Em:BG186518 Em:BG212959 Em:BI255887" FT /note="match: cDNAs: Em:AF425084.1 Em:AK027149.1 FT Em:AK057138.1 Em:D55670.1 Em:S69272.1 Em:U25844.1 FT Em:U96707.2" FT mRNA complement(join(2948393..2948933,2949148..2949303, FT 2953278..2953420,2954826..2954943,2955758..2955904, FT 2959402..2959576,2962128..2962342)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-001" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: ESTs: Em:AA699999 Em:AU137051 Em:BE868533 FT Em:BG186518 Em:BG200445 Em:BG385989 Em:BG468594 Em:BG470080 FT Em:BI255887 Em:BI770492 Em:BM263578" FT /note="match: cDNAs: Em:AF053401.1 Em:BC001394.1 FT Em:BC011076.1 Em:D55670.1 Em:S69272.1 Em:U25844.1 FT Em:U96707.2" FT mRNA complement(join(2948393..2948933,2949148..2949303, FT 2953278..2953420,2954826..2954943,2955758..2955904, FT 2959402..2959576,2971351..2971440)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-004" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: ESTs: Em:AI344119 Em:BF115479 Em:BG186518 FT Em:BG198343 Em:BG200445 Em:BG208237 Em:BG751352 Em:BI551116 FT Em:BI599258 Em:BI599644 Em:BI601713 Em:BI825193 Em:BI826205 FT Em:BI835492 Em:BM312127" FT /note="match: cDNAs: Em:AF425084.1 Em:BC004948.1 FT Em:S69272.1" FT mRNA complement(join(2948393..2948933,2949148..2949303, FT 2953278..2953420,2954826..2954943,2955758..2955904, FT 2959402..2959576,2971482..2971539)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-005" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: ESTs: Em:AA838458 Em:AV713007 Em:BG186518 FT Em:BG200445 Em:BG326502 Em:BG542358 Em:BG749304 Em:BG751986 FT Em:BI195978 Em:BI597326 Em:BI603219 Em:BI669663" FT /note="match: cDNAs: Em:BC004948.1 Em:S69272.1 Em:U96707.2" FT mRNA complement(join(2948393..2948933,2949148..2949303, FT 2953278..2953420,2954826..2954943,2955758..2955904, FT 2959402..2959576,2971725..2971819)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-006" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: ESTs: Em:AA779966 Em:AI248434 Em:AI971072 FT Em:AW445077 Em:BF977367 Em:BG194912 Em:BG200445 Em:BG538345 FT Em:BI259189 Em:BI772650 Em:BM043698 Em:BM272500" FT /note="match: cDNAs: Em:AF425084.1 Em:D55670.1 Em:S69272.1 FT Em:Z22658.1" FT mRNA complement(join(2948393..2948933,2949148..2949303, FT 2953278..2953420,2954826..2954943,2955758..2955904, FT 2959402..2959576,2971767..2972090)) FT /gene="SERPINB6" FT /locus_tag="RP1-90J20.6-003" FT /product="serpin peptidase inhibitor, clade B (ovalbumin), FT member 6" FT /note="match: ESTs: Em:AA363372 Em:AA699999 Em:AI248434 FT Em:AU076805 Em:AU119612 Em:AW470080 Em:AW874369 Em:BF195621 FT Em:BG182807 Em:BG499326 Em:BG533985 Em:BG746783 Em:BI669865 FT Em:BI822888 Em:BI827451 Em:BM083632" FT /note="match: cDNAs: Em:AF425084.1 Em:D55670.1 Em:S69272.1 FT Em:U25844.1" FT mRNA join(2988201..2988265,2989762..2990582) FT /locus_tag="RP1-90J20.7-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BI753511.1 Em:BI820564.1 FT Em:DA076107.1 Em:H38313.1" FT mRNA join(2988201..2988265,2988662..2991400) FT /locus_tag="RP1-90J20.7-004" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK123663.1" FT mRNA join(2988221..2988265,2989762..2989944,2994165..2994287, FT 3006702..3006793,3010259..3010423,3012778..>3012795) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-008" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:CB296564.1" FT mRNA join(2988880..2988943,2994165..2994287,3006702..3006793, FT 3010259..3010423,3012778..3012908,3015764..>3015877) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-007" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:BF132335.1 Em:BF132768.1" FT mRNA join(2988892..2988943,2989762..2990486) FT /locus_tag="RP1-90J20.7-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AV759445.1" FT mRNA join(2988901..2989154,2989762..2991400) FT /locus_tag="RP1-90J20.7-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC108683.1" FT polyA_site complement(2989956) FT polyA_site complement(2989962) FT polyA_signal complement(2989978..2989983) FT polyA_signal 2991380..2991385 FT polyA_site 2991407 FT mRNA complement(join(2989960..2990245,2998851..2998977)) FT /locus_tag="RP1-90J20.8-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AW664963" FT mRNA complement(join(2989960..2990245,2999247..2999368)) FT /locus_tag="RP1-90J20.8-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI367283 Em:AW418942 Em:BE465913 FT Em:BF594628" FT mRNA join(3000110..3000319,3003903..3004023,3006702..3006793, FT 3010259..3010423,3012778..3012908,3015764..>3015877) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-004" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:BI838379 Em:BI838382" FT mRNA join(3000208..3000319,3002284..3002520,3003903..3004023, FT 3004729..3004885,3006702..3006793,3010259..3010423, FT 3012778..3012908,3015764..3015877,3017118..3017219, FT 3019713..3019996) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-002" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:AA809239 Em:AW918463 Em:BE262120 FT Em:BG165946 Em:BI772598 Em:F00072 Em:T16992" FT /note="match: cDNAs: Em:AF252260.1 Em:AK008138.1 FT Em:AK010842.1 Em:AK056981.1 Em:BC006096.1" FT mRNA join(3000223..3000319,3004729..3004885,3006702..3006793, FT 3010259..3010423,3012778..3012908,3017118..3017219, FT 3019713..3019989) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-003" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:AI025359 Em:AW581256 Em:AW750158 FT Em:BE262120 Em:BF212877 Em:BI559582 Em:BI599880" FT mRNA join(3000231..3000319,3006702..3006793,3010259..3010423, FT 3012778..3012908,3015764..3015877,3017118..3017219, FT 3019713..3019996) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-001" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:AA580196 Em:AI031575 Em:AI635310 FT Em:AV703075 Em:AW024649 Em:AW516059 Em:AW945189 Em:BE379346 FT Em:BG674894 Em:BG681033 Em:BG715697 Em:BI670476" FT /note="match: cDNAs: Em:AF128816.1 Em:AF252260.1 FT Em:AK008465.1 Em:AK010842.1 Em:BC006096.1 Em:J02888.1" FT mRNA join(3000236..3000319,3006702..3006793,3010259..3010423, FT 3012778..3012908,3017118..3017219,3019713..3019989) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-005" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:AA576647 Em:AV694879 Em:AW581255 FT Em:AW581256 Em:AW675359 Em:BE270450 Em:BE727824 Em:BF212877 FT Em:BI257790" FT mRNA join(3000392..3000601,3006702..3006793,3010259..3010423, FT 3012778..3012908,3015764..3015877,3017118..3017219, FT 3019713..3019996) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-006" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: ESTs: Em:AI093535 Em:AW025039 Em:BE262120 FT Em:BG165946 Em:BG201496 Em:BI333292" FT CDS join(3006787..3006793,3010259..3010423,3012778..>3012795) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-008" FT /standard_name="OTTHUMP00000163079" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /protein_id="CAM28342.1" FT /translation="MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAM FT NLEPRATDKDITGTLSNP" FT CDS join(3006787..3006793,3010259..3010423,3012778..3012908, FT 3015764..>3015877) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-004" FT /standard_name="OTTHUMP00000015951" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /protein_id="CAI23293.1" FT /translation="MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAM FT NLEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPL FT YWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQ" FT CDS join(3006787..3006793,3010259..3010423,3012778..3012908, FT 3015764..3015877,3017118..3017219,3019713..3019889) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-001" FT /standard_name="OTTHUMP00000015948" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: proteins: Sw:P16083" FT /protein_id="CAI23294.1" FT /translation="MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAM FT NLEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPL FT YWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNG FT DSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIP FT CTAHWHFGQ" FT CDS join(3006787..3006793,3010259..3010423,3012778..3012908, FT 3017118..3017219,3019713..3019889) FT /gene="NQO2" FT /locus_tag="RP1-90J20.3-003" FT /standard_name="OTTHUMP00000015950" FT /product="NAD(P)H dehydrogenase, quinone 2" FT /note="match: proteins: Sw:P16083" FT /protein_id="CAI23295.1" FT /translation="MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAM FT NLEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQGKL FT ALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEER FT KGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ" FT polyA_signal 3019969..3019974 FT polyA_site 3019989 FT polyA_site 3019996 FT misc_feature 3037741 FT /note="Clone_left_end: RP1-40E16" FT misc_feature 3037941..3187386 FT /note="annotated region of clone" FT CDS 3045618..3046034 FT /pseudo FT /locus_tag="RP1-40E16.10-001" FT /product="family with sequence similarity 136, member B" FT /note="match: proteins: Sw:A4QNC6.1 Sw:Q2HJI3.1 Sw:Q63ZH8.1 FT Sw:Q6PBU0.1 Sw:Q96C01.1 Sw:Q9CR98.1" FT /db_xref="PSEUDO:CAI20494.2" FT mRNA complement(join(3182978..3183960,AL445434.16:3774..4205, FT AL445434.16:8614..8704)) FT /locus_tag="RP1-40E16.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL528821 Em:BI089937" FT mRNA complement(join(3182978..3183960,AL445434.16:3774..4178, FT AL445434.16:8614..8695)) FT /locus_tag="RP1-40E16.9-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL528821 Em:AL528822 Em:AV723391 FT Em:AV723549" FT misc_feature 3047456 FT /note="Clone_right_end: RP1-90J20" FT CDS 3049068..3049445 FT /pseudo FT /locus_tag="RP1-40E16.4-001" FT /product="pseudogene similar to cytoplasmic antiproteinase FT 2 (CAP2, SERPINB8)" FT /note="match: proteins: Sw:P50452 Tr:O08799" FT mRNA complement(join(3051335..3051485,3052197..3052317)) FT /locus_tag="RP1-40E16.3-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:T16992" FT mRNA complement(join(3051335..3051485,3053804..3053987)) FT /locus_tag="RP1-40E16.3-003" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF212877 Em:BI559582 Em:BI599880 FT Em:BM685503" FT mRNA complement(join(3052197..3052317,3053804..3053998)) FT /locus_tag="RP1-40E16.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI838379 Em:BI838382" FT mRNA join(3056124..3056258,3056733..3056995) FT /locus_tag="RP1-40E16.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA393286" FT mRNA join(3064092..3064293,3076998..3077054,3104492..3104549, FT 3105716..3106285) FT /gene="RIPK1" FT /locus_tag="RP1-40E16.1-006" FT /product="receptor (TNFRSF)-interacting serine-threonine FT kinase 1" FT /note="match: ESTs: Em:AL039269 Em:AW890282 Em:BI599131" FT mRNA join(3064225..3064293,3078013..3078169,3081213..3081350, FT 3083319..3083547,3085493..3085642,3089815..3089891, FT 3104459..3104549,3105716..3106285) FT /gene="RIPK1" FT /locus_tag="RP1-40E16.1-004" FT /product="receptor (TNFRSF)-interacting serine-threonine FT kinase 1" FT /note="match: ESTs: Em:AL521376 Em:AL545479 Em:AU140586 FT Em:BF086124 Em:BG687602 Em:BG719366" FT mRNA join(3068741..3068963,3076998..3077221,3078013..3078169, FT 3081213..3081350,3083319..3083547,3085493..3085642, FT 3089815..3089891,3104459..3104549,3105716..3106285, FT 3111037..3111189,3113287..3115419) FT /gene="RIPK1" FT /locus_tag="RP1-40E16.1-005" FT /product="receptor (TNFRSF)-interacting serine-threonine FT kinase 1" FT /note="match: ESTs: Em:AA150537 Em:AA352373 Em:AI272650 FT Em:AI571027 Em:AL571266 Em:AU140586 Em:AU158578 Em:AW081905 FT Em:AW953591 Em:AW978650 Em:BE001662 Em:BE043916 Em:BE167596 FT Em:BE884263 Em:BF000659 Em:BG107606 Em:BG741713 Em:BI252704 FT Em:BI331833 Em:H97473 Em:W86552" FT /note="match: cDNAs: Em:U25995.1 Em:U50062.1" FT CDS join(3077058..3077221,3078013..3078169,3081213..3081350, FT 3083319..3083547,3085493..3085642,3089815..3089891, FT 3104459..3104549,3105716..3106285,3111037..3111189, FT 3113287..3113573) FT /gene="RIPK1" FT /locus_tag="RP1-40E16.1-005" FT /standard_name="OTTHUMP00000015955" FT /product="receptor (TNFRSF)-interacting serine-threonine FT kinase 1" FT /note="match: proteins: Sw:Q13546 Sw:Q60855 Tr:Q9ZQ31" FT /protein_id="CAD70625.1" FT /translation="MQPDMSLNVIKMKSSDFLESAELDSGGFGKVSLCFHRTQGLMIMK FT TVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVL FT KAEMSTPLSVKGRIILEIIEGMCYLHGKGVIHKDLKPENILVDNDFHIKIADLGLASFK FT MWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIF FT ANKEPYENAICEQQLIMCIKSGNRPDVDDITEYCPREIISLMKLCWEANPEARPTFPGI FT EEKFRPFYLSQLEESVEEDVKSLKKEYSNENAVVKRMQSLQLDCVAVPSSRSNSATEQP FT GSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQP FT RQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQ FT PQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGNTPTM FT PFSSLPPTDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKYQAIF FT DNTTSLTDKHLDPIRENLGKHWKNCARKLGFTQSQIDEIDHDYERDGLKEKVYQMLQKW FT VMREGIKGATVGKLAQALHQCSRIDLLSSLIYVSQN" FT misc_feature 3093463..3093514 FT /note="Single clone region. Assembly confirmed by FT restriction digest data," FT misc_feature 3093521 FT /note="weak data" FT misc_feature 3093583 FT /note="weak data" FT misc_feature 3093614 FT /note="weak data" FT polyA_signal 3115402..3115407 FT polyA_site 3115420 FT mRNA join(3118610..3119081,3119519..3119746,3123891..3123994, FT 3127476..3127642,3129279..3129432,3137596..3137727, FT 3140620..3140743,3152722..3153430) FT /gene="BPHL" FT /locus_tag="RP1-40E16.5-003" FT /product="biphenyl hydrolase-like (serine hydrolase; breast FT epithelial mucin-associated antigen)" FT /note="match: ESTs: Em:AA169798 Em:AA814164 Em:AA910750 FT Em:AI672895 Em:AV705828 Em:AW872800 Em:BE671194 Em:BE703346 FT Em:BF058083 Em:BF448366 Em:BF883436 Em:BF883667 Em:BG714668 FT Em:BM053110 Em:T28159" FT /note="match: cDNAs: Em:X81372.1" FT mRNA join(3118953..3119081,3123891..3123994,3127476..3127642, FT 3129279..3129432,3137596..3137727,3140620..3140743, FT 3152722..3153430) FT /gene="BPHL" FT /locus_tag="RP1-40E16.5-001" FT /product="biphenyl hydrolase-like (serine hydrolase; breast FT epithelial mucin-associated antigen)" FT /note="match: ESTs: Em:AA169798 Em:AA814164 Em:AA911487 FT Em:AI268326 Em:AV705828 Em:AW071802 Em:AW872800 Em:BE671194 FT Em:BE703346 Em:BE819652 Em:BF058083 Em:BG121617 Em:BG325068 FT Em:BG426469 Em:BG426643 Em:BG613224 Em:BG617634" FT /note="match: cDNAs: Em:AK002907.1 Em:AK007606.1 FT Em:AK008202.1 Em:AK017801.1" FT CDS join(3118975..3119081,3123891..3123994,3127476..3127642, FT 3129279..3129432,3137596..3137727,3140620..3140743, FT 3152722..3152809) FT /gene="BPHL" FT /locus_tag="RP1-40E16.5-001" FT /standard_name="OTTHUMP00000015958" FT /product="biphenyl hydrolase-like (serine hydrolase; breast FT epithelial mucin-associated antigen)" FT /protein_id="CAD70626.1" FT /translation="MVAVLGGRGVLRLRLLLSALKPGIHVPRAGPAAAFGTSVTSAKVA FT VNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRP FT PDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWG FT ANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDG FT NICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADE FT FNKLAEDFLQ" FT mRNA join(3119042..3119081,3119519..3119746,3123891..3123994, FT 3127476..3127642,3129279..3129432,3137596..3137727, FT 3140620..3140743,3152722..3153430) FT /gene="BPHL" FT /locus_tag="RP1-40E16.5-002" FT /product="biphenyl hydrolase-like (serine hydrolase; breast FT epithelial mucin-associated antigen)" FT /note="match: ESTs: Em:AA167197 Em:AA169798 Em:AA814164 FT Em:AA910750 Em:AI167945 Em:AI418120 Em:AI672895 Em:AI818871 FT Em:AV686154 Em:AV705828 Em:AW071802 Em:AW872800 Em:BE271371 FT Em:BE671194 Em:BE703346 Em:BF444970 Em:BG426090 Em:R09405 FT Em:T28159" FT /note="match: cDNAs: Em:X81372.1" FT CDS join(3119691..3119746,3123891..3123994,3127476..3127642, FT 3129279..3129432,3137596..3137727,3140620..3140743, FT 3152722..3152809) FT /gene="BPHL" FT /locus_tag="RP1-40E16.5-002" FT /standard_name="OTTHUMP00000015959" FT /product="biphenyl hydrolase-like (serine hydrolase; breast FT epithelial mucin-associated antigen)" FT /note="match: proteins: Sw:Q86WA6 Tr:Q9VD00" FT /protein_id="CAD70627.1" FT /translation="MPRNLLYSLLSSHLSPHFSTSVTSAKVAVNGVQLHYQQTGEGDHA FT VLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDRDFPADFFERDAKDA FT VDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIR FT DVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIV FT HGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFLQ" FT misc_feature 3125966 FT /note="Clone_left_end: RP5-1112K15" FT misc_feature 3146693 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT 400bp according to restriction digest data" FT polyA_signal 3153413..3153418 FT polyA_site 3153431 FT polyA_site complement(3153903) FT polyA_signal complement(3153917..3153922) FT mRNA complement(join(3153903..3155157,3155859..3155969, FT 3156278..3156386,3157641..3157760)) FT /locus_tag="RP1-40E16.7-001" FT /product="novel protein similar to tubulin beta polypeptide FT TUBB" FT /note="match: ESTs: Em:AA083836 Em:AA808433 Em:AI816057 FT Em:AI879635 Em:AI950928 Em:AL536498 Em:AL539759 Em:AU118661 FT Em:AU142261 Em:AV607517 Em:AV610866 Em:AW020764 Em:AW162320 FT Em:AW162876 Em:AW498867 Em:AW615820 Em:BF536290 Em:BF768967 FT Em:BF769672 Em:BI491717 Em:BI554002 Em:BI818506 Em:BM012194 FT Em:BM392258 Em:D53260 Em:F12005 Em:W65108 Em:W75516" FT /note="match: cDNAs: Em:AJ249551.1 Em:BC001194.1 FT Em:BC005547.1 Em:BC022919.1 Em:X07011.1 Em:X79535.1" FT CDS complement(join(3154097..3155157,3155859..3155969, FT 3156278..3156386,3157641..3157697)) FT /locus_tag="RP1-40E16.7-001" FT /standard_name="OTTHUMP00000015956" FT /product="novel protein similar to tubulin beta polypeptide FT TUBB" FT /note="match: proteins: Sw:P02554 Sw:P04691 Sw:P09203 FT Sw:P11833 Sw:P13602 Sw:P30883 Sw:P32882 Sw:P36221 FT Sw:P68372" FT /protein_id="CAD70628.1" FT /translation="MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLE FT RINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG FT HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI FT MNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTY FT GDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY FT RALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSY FT FVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT FT GEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDEA" FT mRNA complement(join(3154813..3155289,3155859..3155969, FT 3156278..3156386,3157641..3157760)) FT /locus_tag="RP1-40E16.7-002" FT /product="novel protein similar to tubulin beta polypeptide FT TUBB" FT /note="match: ESTs: Em:AA300877 Em:AL516685 Em:AW480475 FT Em:BG767831 Em:F12005 Em:T32959" FT CDS complement(join(3177278..3177876,3179166..3179276, FT 3179838..3179998)) FT /pseudo FT /locus_tag="RP1-40E16.8-001" FT /product="tubulin beta polypeptide (TUBB) pseudogene" FT /note="match: proteins: Sw:P12457 Sw:P33624 Tr:O43124 FT Tr:Q25569" FT polyA_signal complement(3183017..3183022) FT polyA_site complement(3183105) FT polyA_signal complement(3183140..3183145) FT misc_feature 3187286 FT /note="Clone_right_end: RP1-40E16" FT misc_feature 3187387..3212554 FT /note="annotated region of clone" FT mRNA complement(join(AL031963.40:145138..146120, FT 3191060..3191491,3195900..3195990)) FT /locus_tag="RP1-40E16.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL528821 Em:BI089937" FT mRNA complement(join(AL031963.40:145138..146120, FT 3191060..3191464,3195900..3195981)) FT /locus_tag="RP1-40E16.9-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL528821 Em:AL528822 Em:AV723391 FT Em:AV723549" FT misc_feature 3212355 FT /note="Clone_left_end: RP11-506K6" FT misc_feature 3212555..3349049 FT /note="annotated region of clone" FT misc_feature 3222152..3222250 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 3222251 FT /note="Tandem repeat. Forced join. Assembly confirmed by FT restriction digest data" FT misc_feature 3222252..3222449 FT /note="Single clone region. Sequence from overlapping clone FT RP5-1112K15(AL445434). Assembly confirmed by restriction FT digest" FT polyA_site complement(3224516) FT polyA_signal complement(3224526..3224531) FT polyA_signal complement(3224744..3224749) FT polyA_site 3225131 FT mRNA complement(join(3224517..3226045,3226393..3226503, FT 3226795..3226903,3227721..3227969)) FT /gene="RP11-506K6.1" FT /locus_tag="RP11-506K6.1-001" FT /product="novel protein similar to tubulin beta polypeptide FT TUBB" FT /note="match: ESTs: Em:AA198380 Em:AA933733 Em:AI358966 FT Em:AI816418 Em:AL538567 Em:AL538599 Em:AL538610 Em:AL539378 FT Em:AL567775 Em:AV364263 Em:AW089687 Em:AW161173 Em:AW249812 FT Em:AW250331 Em:BB450494 Em:BE261207 Em:BE619248 Em:BG055857 FT Em:BG056907 Em:BI199157 Em:BI544833 Em:BI596940 Em:BM116886 FT Em:D56396 Em:N52197 Em:T15696 Em:T33551" FT /note="match: cDNAs: Em:AF035316.1 Em:AK010786.1 FT Em:AK013717.1 Em:BC001194.1 Em:BC001352.1 Em:X03369.1 FT Em:X79535.1" FT CDS complement(join(3224985..3226045,3226393..3226503, FT 3226795..3226903,3227721..3227777)) FT /gene="RP11-506K6.1" FT /locus_tag="RP11-506K6.1-001" FT /standard_name="OTTHUMP00000015964" FT /product="novel protein similar to tubulin beta polypeptide FT TUBB" FT /note="match: proteins: Sw:P04691 Sw:P09203 Sw:P32882 FT Sw:Q13509 Sw:Q24560 Tr:O18342 Tr:O18343 Tr:Q13885 Tr:Q13885 FT Tr:Q99JZ6 Tr:Q9BVA1 Tr:Q9DFT6" FT /protein_id="CAI40952.1" FT /translation="MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLE FT RINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG FT HYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRI FT MNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTY FT GDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQY FT RALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSY FT FVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT FT GEGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGEFEEEEGEDEA" FT mRNA complement(join(3224517..3226045,3226393..3226503, FT 3226795..3226903,3231791..3231964)) FT /gene="RP11-506K6.1" FT /locus_tag="RP11-506K6.1-002" FT /product="novel protein similar to tubulin beta polypeptide FT TUBB" FT /note="match: ESTs: Em:BG117381 Em:BG420485" FT misc_feature 3252538 FT /note="Clone_right_end: RP5-1112K15" FT CDS join(<3255328..3255463,3267825..3267946) FT /codon_start=1 FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-001" FT /standard_name="OTTHUMP00000015960" FT /product="chromosome 6 open reading frame 86" FT /protein_id="CAI40954.1" FT /translation="LHRSTTSPAYHVLVILFEEQGHTDGLHVRSGGSRMFGGSRSKINS FT ARKTNKQVFVSYNLQNTDSNFALLVENRIKEEMEAFPEKF" FT mRNA join(<3255328..3255463,3267825..3268282) FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-001" FT /product="chromosome 6 open reading frame 86" FT /note="match: ESTs: Em:AA884145 Em:AA918553" FT CDS join(<3259154..3259430,3267825..3267946) FT /codon_start=1 FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-002" FT /standard_name="OTTHUMP00000015961" FT /product="chromosome 6 open reading frame 86" FT /protein_id="CAI40955.1" FT /translation="ESALGLSVLAPSGLAGLAAARTRVWRCGPGAVGRHGGAGCRRRRG FT RLPAQLQREAVGAAGPLPRHAADGLAVPVGGGHAAPAQPRRGHVQPLPRKTNKQVFVSY FT NLQNTDSNFALLVENRIKEEMEAFPEKF" FT mRNA join(<3259154..3259430,3267825..3268013) FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-002" FT /product="chromosome 6 open reading frame 86" FT /note="match: ESTs: Em:W54368" FT /note="match: cDNAs: Em:AK009887.1" FT mRNA join(<3259195..3259430,3263918..>3264093) FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-003" FT /product="chromosome 6 open reading frame 86" FT /note="match: ESTs: Em:BF727458" FT CDS join(<3259195..3259430,3263918..>3264093) FT /codon_start=2 FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-003" FT /standard_name="OTTHUMP00000015962" FT /product="chromosome 6 open reading frame 86" FT /protein_id="CAI40956.1" FT /translation="AGLAAARTRVWRCGPGAVGRHGGAGCRRRRGRLPAQLQREAVGAA FT GPLPRHAADGLAVPVGGGHAAPAQPRRGHVQPLRLHPRVYLPPWRHFRHDLYWPCPAPR FT YVPTAGAAWPARWGPLFNGTMKQVPSEVKHLYA" FT CDS join(<3259210..3259430,3263918..3263993,3267825..3267946) FT /codon_start=3 FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-004" FT /standard_name="OTTHUMP00000015963" FT /product="chromosome 6 open reading frame 86" FT /protein_id="CAI40957.1" FT /translation="RGPGSGAVGREPWGGMEGLVVAAGGDVSLHNFSARLWEQLVHFHV FT MRLTDSLFLWVGATPHLRNLAVAMCSRYDSIPVSTSLLGDTSDTTSTGLAQRLARKTNK FT QVFVSYNLQNTDSNFALLVENRIKEEMEAFPEKF" FT mRNA join(<3259210..3259430,3263918..3263993,3267825..3268282) FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-004" FT /product="chromosome 6 open reading frame 86" FT /note="match: ESTs: Em:AA665366 Em:AA728767 Em:AA932444 FT Em:AA948231 Em:AA972390 Em:AI220233 Em:AI346070 Em:AI827721 FT Em:AW975023 Em:BE755729 Em:BF042553 Em:BF973374 Em:BG025260 FT Em:BG037089 Em:T95182" FT mRNA join(3259210..3259430,3263918..3263993,3264408..3264559, FT 3267825..3268282) FT /gene="C6orf86" FT /locus_tag="RP11-506K6.3-005" FT /product="chromosome 6 open reading frame 86" FT /note="match: ESTs: Em:BF981319" FT polyA_signal 3267996..3268001 FT polyA_site 3268009 FT polyA_signal 3268262..3268267 FT polyA_signal 3268274..3268279 FT polyA_site 3268281 FT polyA_site complement(3269209) FT polyA_signal complement(3269221..3269226) FT polyA_site complement(3269591) FT polyA_signal complement(3269611..3269616) FT polyA_site complement(3269697) FT polyA_signal complement(3269712..3269717) FT polyA_site complement(3270343) FT polyA_signal complement(3270361..3270366) FT mRNA complement(join(3324068..3324236,AL160398.27:63373..63527, FT AL160398.27:68937..69040,AL160398.27:85279..85523, FT AL160398.27:98004..98173)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-005" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:BI463983.1" FT mRNA complement(join(3323559..3324236,AL160398.27:63373..63527, FT AL160398.27:68937..69040,AL160398.27:109091..109686)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-001" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:AA636541 Em:AA636541.1 Em:AI505291 FT Em:AI505291.1 Em:BM546797.1" FT CDS complement(join(3324064..3324236,AL160398.27:63373..63527, FT AL160398.27:68937..69040,AL160398.27:109091..109300)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-001" FT /standard_name="OTTHUMP00000015965" FT /product="chromosome 6 open reading frame 85" FT /note="match: proteins: Sw:Q9P290" FT /protein_id="CAI40959.1" FT /translation="MGNWTSLPTTPFATAPWEAAGNRSNSSGADGGDTPPLPSPPDKGD FT NASNCDCRAWDYGIRAGLVQNVVSKWDLVCDNAWKVHIAKFSLLVGLIFGYLITGCIAD FT WVGRRPVLLFSIIFILIFGLTVALSVNVTMFSTLRFFEGFCLAGIILTLYALRIELCPP FT GKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALIICPFLLMLLYWS" FT mRNA complement(join(3323559..3324236,AL160398.27:63373..63506, FT AL160398.27:109244..>109466)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-003" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:AA693557 Em:AA699337 Em:AI505291 FT Em:H55992 Em:R16723" FT /note="match: cDNAs: Em:AL110245.1" FT CDS complement(join(3324064..3324236,AL160398.27:63373..63506, FT AL160398.27:109244..>109466)) FT /codon_start=3 FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-003" FT /standard_name="OTTHUMP00000015967" FT /product="chromosome 6 open reading frame 85" FT /note="match: proteins: Tr:Q9QZG1 Tr:Q9UFY2" FT /protein_id="CAI40960.1" FT /translation="AIRRPSCCSPGSRRCSSASASSRTRSSWTSPTSGAAGPAKAPSWQ FT GSPPQAGAGTWATGPASPPPPSPLPPGRLLFSIIFILIFGLTVALSVNVTMFSTLRFFE FT GFCLAGIILTLYALRIELCPPGKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALI FT ICPFLLMLLYWS" FT polyA_site complement(3323558) FT polyA_signal complement(3323592..3323597) FT mRNA complement(join(3269210..3273646,3284086..3284209, FT 3285313..3285345,3287093..3287325,3289998..3290100, FT 3298325..3298452,3324068..>3324236)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-002" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:AA323772 Em:AA493263 Em:AA644477 FT Em:AA844597 Em:AI027685 Em:AI187391 Em:AI568462 Em:AI636930 FT Em:AI819296 Em:AI834938 Em:AI912017 Em:AI932981 Em:AW001420 FT Em:AW085289 Em:AW136148 Em:AW195237 Em:AW241941 Em:AW291424 FT Em:AW615424 Em:AW947396 Em:BE552148 Em:BF000370 Em:BF224355 FT Em:BF229779 Em:BF784065 Em:R49329 Em:T05374" FT /note="match: cDNAs: Em:AF184921.1" FT CDS complement(join(3273289..3273646,3284086..3284209, FT 3285313..3285345,3287093..3287325,3289998..3290100, FT 3298325..3298452,3324068..>3324236)) FT /codon_start=3 FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-002" FT /standard_name="OTTHUMP00000015966" FT /product="chromosome 6 open reading frame 85" FT /note="match: proteins: Tr:Q9QZG1 Tr:Q9UFY2" FT /protein_id="CAI40961.1" FT /translation="IELCPPGKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALII FT CPFLLMLLYWSIFPESLRWLMATQQFESAKRLILHFTQKNRMNPEGDIKGVIPELEKEL FT SRRPKKVCIVKVVGTRNLWKNIVVLCVNSLTGYGIHHCFARSMMGHEVKVPLLENFYAD FT YYTTASIALVSCLAMCVVVRFLGRRGGLLLFMILTALASLLQLGLLNLIGKYSQHPDSG FT MSDSVKDKFSIAFSIVGMFASHAVGSLSVFFCAEITPTVIRCGGLGLVLASAGFGMLTA FT PIIELHNQKGYFLHHIIFACCTLICIICILLLPESRDQNLPENISNGEHYTRQPLLPHK FT KGEQPLLLTNAELKDYSGLHDAAAAGDTLPEGATANGMKAM" FT mRNA complement(join(3324068..3324236,3324331..3324399)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-004" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:R09977" FT misc_feature 3346958 FT /note="Clone_left_end: RP11-15N12" FT misc_feature 3349050..3480044 FT /note="annotated region of clone" FT misc_feature 3354326 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 380bp from restriction digest data and FT spanning pUC clone" FT misc_feature 3373573 FT /note="Clone_right_end: RP11-506K6" FT mRNA complement(join(AL445309.13:111606..111774, FT 3410422..3410576,3415986..3416089,3432328..3432572, FT 3445053..3445222)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-005" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:BI463983.1" FT mRNA complement(join(AL445309.13:111097..111774, FT 3410422..3410576,3415986..3416089,3456140..3456735)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-001" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:AA636541 Em:AA636541.1 Em:AI505291 FT Em:AI505291.1 Em:BM546797.1" FT CDS complement(join(AL445309.13:111602..111774, FT 3410422..3410576,3415986..3416089,3456140..3456349)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-001" FT /standard_name="OTTHUMP00000015965" FT /product="chromosome 6 open reading frame 85" FT /note="match: proteins: Sw:Q9P290" FT /protein_id="CAI12303.1" FT /translation="MGNWTSLPTTPFATAPWEAAGNRSNSSGADGGDTPPLPSPPDKGD FT NASNCDCRAWDYGIRAGLVQNVVSKWDLVCDNAWKVHIAKFSLLVGLIFGYLITGCIAD FT WVGRRPVLLFSIIFILIFGLTVALSVNVTMFSTLRFFEGFCLAGIILTLYALRIELCPP FT GKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALIICPFLLMLLYWS" FT mRNA complement(join(AL445309.13:111097..111774, FT 3410422..3410555,3456293..>3456515)) FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-003" FT /product="chromosome 6 open reading frame 85" FT /note="match: ESTs: Em:AA693557 Em:AA699337 Em:AI505291 FT Em:H55992 Em:R16723" FT /note="match: cDNAs: Em:AL110245.1" FT CDS complement(join(AL445309.13:111602..111774, FT 3410422..3410555,3456293..>3456515)) FT /codon_start=3 FT /gene="C6orf85" FT /locus_tag="RP11-506K6.2-003" FT /standard_name="OTTHUMP00000015967" FT /product="chromosome 6 open reading frame 85" FT /note="match: proteins: Tr:Q9QZG1 Tr:Q9UFY2" FT /protein_id="CAI12304.1" FT /translation="AIRRPSCCSPGSRRCSSASASSRTRSSWTSPTSGAAGPAKAPSWQ FT GSPPQAGAGTWATGPASPPPPSPLPPGRLLFSIIFILIFGLTVALSVNVTMFSTLRFFE FT GFCLAGIILTLYALRIELCPPGKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALI FT ICPFLLMLLYWS" FT misc_feature 3480045..3606325 FT /note="annotated region of clone" FT misc_feature 3480045 FT /note="Clone_left_end: RP1-223B1" FT mRNA complement(join(3594481..3594769,AL138881.12:17657..17952, FT AL138881.12:18553..18756)) FT /locus_tag="RP1-223B1.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG504180 Em:H50043" FT misc_feature 3505133..3505146 FT /note="Single clone region. Single BigDye primer read. FT Assembly confirmed by restiction digest" FT misc_feature 3517284..3517295 FT /note="Tandem repeat. Forced join. Approximately 300 bases FT missing according to restriction digest" FT misc_feature 3606325 FT /note="Clone_right_end: RP1-223B1" FT misc_feature 3606326..3645034 FT /note="annotated region of clone" FT mRNA complement(join(AL031943.11:114437..114725, FT 3623882..3624177,3624778..3624981)) FT /locus_tag="RP1-223B1.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG504180 Em:H50043" FT misc_feature 3644835 FT /note="Clone_left_end: RP1-72E17" FT misc_feature complement(3645035..3735233) FT /note="annotated region of clone" FT CDS complement(join(3723853..3723970,3727785..3727896, FT AL391422.17:4080..4197,AL391422.17:5058..5149, FT AL391422.17:5797..>5895)) FT /codon_start=3 FT /locus_tag="RP1-72E17.1-003" FT /standard_name="OTTHUMP00000015969" FT /product="novel protein" FT /protein_id="CAI22539.1" FT /translation="QSRRIEPVMGRLLLCASHGEIEKHPSLHASSYGLVAIKEAHDIET FT RLNEVEKLLKTIISMPCKYSRSEVVLTFFERSPLDQVLKNDNVHKIQPSFQSPVKISEI FT MRSNGFCLANTETIVIDHSIPNGRDQQLGVDPTEHLFENGSEFPSELEDGDDPAAYVTN FT LSYYHLVPFETDIWD" FT mRNA complement(join(3722854..3723970,3727785..3727896, FT AL391422.17:4080..4197,AL391422.17:5058..5149, FT AL391422.17:5797..>5895)) FT /locus_tag="RP1-72E17.1-003" FT /product="novel protein" FT /note="match: ESTs: Em:BE539071 Em:BE539071.1" FT polyA_signal complement(3722866..3722871) FT polyA_site complement(3722853) FT CDS complement(join(3723853..3723970,3727785..3727896, FT AL391422.17:4080..4197,AL391422.17:5058..5149, FT AL391422.17:18277..18532)) FT /locus_tag="RP1-72E17.1-001" FT /standard_name="OTTHUMP00000015968" FT /product="novel protein" FT /protein_id="CAI22540.1" FT /translation="MASAVFEGTSLVNMFVRGCWVNGIRRLIVSRRGDEEEFFEIRTEW FT SDRSVLYLHRSLADLGRLWQRLRDAFPEDRSELAQGPLRQGLVAIKEAHDIETRLNEVE FT KLLKTIISMPCKYSRSEVVLTFFERSPLDQVLKNDNVHKIQPSFQSPVKISEIMRSNGF FT CLANTETIVIDHSIPNGRDQQLGVDPTEHLFENGSEFPSELEDGDDPAAYVTNLSYYHL FT VPFETDIWD" FT mRNA complement(join(3722854..3723970,3727785..3727896, FT AL391422.17:4080..4197,AL391422.17:5058..5149, FT AL391422.17:18277..19027)) FT /locus_tag="RP1-72E17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AK024828.1 Em:BC018520.1" FT /note="match: ESTs: Em:AA253216 Em:AA418437 Em:AA433850 FT Em:AI129493 Em:AI233954 Em:AI268876 Em:AI299917 FT Em:AI669333.1 Em:AI766421.1 Em:AI952966.1 Em:AI952970.1 FT Em:AL533952 Em:AW007219.1 Em:BE159143 Em:BE539071 FT Em:BG518575 Em:BG700513 Em:BI549854 Em:BI686272 Em:H59316 FT Em:H69759 Em:HSC29G101 Em:N31667 Em:N49367 Em:R17719 FT Em:T31383 Em:W25917" FT mRNA complement(join(3722854..3723970,3727785..3727896, FT AL391422.17:4080..4197,AL391422.17:5063..5149, FT AL391422.17:18277..18533)) FT /locus_tag="RP1-72E17.1-002" FT /product="novel protein" FT /note="match: cDNAs: Em:AK005003.1" FT /note="match: ESTs: Em:AA253216 Em:AA418437 Em:AA433850 FT Em:AI268876 Em:AI299917 Em:AI669333.1 Em:AI952966.1 FT Em:AI952970.1 Em:AW007219.1 Em:H59316 Em:H69759 FT Em:HSC29G101 Em:N31667 Em:N49367 Em:R17719 Em:T31383 FT Em:W25917" FT misc_feature complement(3645035) FT /note="Clone_left_end: RP1-72E17" FT misc_feature 3735234..3871454 FT /note="annotated region of clone" FT CDS join(complement(3739030..>3739128), FT complement(3738291..3738382),complement(3737313..3737430), FT AL033523.14:7338..7449,AL033523.14:11264..11381) FT /codon_start=3 FT /locus_tag="RP1-72E17.1-003" FT /standard_name="OTTHUMP00000015969" FT /product="novel protein" FT /protein_id="CAI13992.1" FT /translation="QSRRIEPVMGRLLLCASHGEIEKHPSLHASSYGLVAIKEAHDIET FT RLNEVEKLLKTIISMPCKYSRSEVVLTFFERSPLDQVLKNDNVHKIQPSFQSPVKISEI FT MRSNGFCLANTETIVIDHSIPNGRDQQLGVDPTEHLFENGSEFPSELEDGDDPAAYVTN FT LSYYHLVPFETDIWD" FT mRNA join(complement(3739030..>3739128), FT complement(3738291..3738382),complement(3737313..3737430), FT AL033523.14:7338..7449,AL033523.14:11264..12380) FT /locus_tag="RP1-72E17.1-003" FT /product="novel protein" FT /note="match: ESTs: Em:BE539071 Em:BE539071.1" FT misc_feature 3750005..3750095 FT /note="Sequence from overlapping clone RP11-528H16 FT (AL138881). Assembly confirmed by restriction digest" FT mRNA complement(join(3739030..3739203,3739292..3739395, FT 3751510..3751763)) FT /locus_tag="RP1-72E17.1-004" FT /product="novel protein" FT /note="match: ESTs: Em:BF568259 Em:BG829895" FT CDS join(complement(3751510..3751765), FT complement(3738291..3738382),complement(3737313..3737430), FT AL033523.14:7338..7449,AL033523.14:11264..11381) FT /locus_tag="RP1-72E17.1-001" FT /standard_name="OTTHUMP00000015968" FT /product="novel protein" FT /protein_id="CAI13993.1" FT /translation="MASAVFEGTSLVNMFVRGCWVNGIRRLIVSRRGDEEEFFEIRTEW FT SDRSVLYLHRSLADLGRLWQRLRDAFPEDRSELAQGPLRQGLVAIKEAHDIETRLNEVE FT KLLKTIISMPCKYSRSEVVLTFFERSPLDQVLKNDNVHKIQPSFQSPVKISEIMRSNGF FT CLANTETIVIDHSIPNGRDQQLGVDPTEHLFENGSEFPSELEDGDDPAAYVTNLSYYHL FT VPFETDIWD" FT mRNA join(complement(3751510..3752260), FT complement(3738291..3738382),complement(3737313..3737430), FT AL033523.14:7338..7449,AL033523.14:11264..12380) FT /locus_tag="RP1-72E17.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA253216 Em:AA418437 Em:AA433850 FT Em:AI129493 Em:AI233954 Em:AI268876 Em:AI299917 FT Em:AI669333.1 Em:AI766421.1 Em:AI952966.1 Em:AI952970.1 FT Em:AL533952 Em:AW007219.1 Em:BE159143 Em:BE539071 FT Em:BG518575 Em:BG700513 Em:BI549854 Em:BI686272 Em:H59316 FT Em:H69759 Em:HSC29G101 Em:N31667 Em:N49367 Em:R17719 FT Em:T31383 Em:W25917" FT /note="match: cDNAs: Em:AK024828.1 Em:BC018520.1" FT mRNA join(complement(3751510..3751766), FT complement(3738296..3738382),complement(3737313..3737430), FT AL033523.14:7338..7449,AL033523.14:11264..12380) FT /locus_tag="RP1-72E17.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:AA253216 Em:AA418437 Em:AA433850 FT Em:AI268876 Em:AI299917 Em:AI669333.1 Em:AI952966.1 FT Em:AI952970.1 Em:AW007219.1 Em:H59316 Em:H69759 FT Em:HSC29G101 Em:N31667 Em:N49367 Em:R17719 Em:T31383 FT Em:W25917" FT /note="match: cDNAs: Em:AK005003.1" FT CDS join(3754333..3754636,3754940..3755068) FT /pseudo FT /locus_tag="RP11-420L9.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q9D617 Tr:Q9D6K8 Tr:Q9D9Q3 FT Tr:Q9DB70" FT misc_feature 3774617..3774754 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 3774755 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 50bp by restriction digest data" FT mRNA join(3832169..3832245,3855704..3855980,3856797..3857093) FT /locus_tag="RP11-420L9.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG721636" FT misc_feature 3833757..3833760 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 3847423 FT /note="Clone_left_end: RP1-140K8" FT mRNA 3849620..3851551 FT /gene="FAM50B" FT /locus_tag="RP11-420L9.1-002" FT /product="family with sequence similarity 50, member B" FT /note="match: ESTs: Em:BE745423 Em:BI765909" FT mRNA join(3849622..3849720,3850023..3851551) FT /gene="FAM50B" FT /locus_tag="RP11-420L9.1-001" FT /product="family with sequence similarity 50, member B" FT /note="match: ESTs: Em:AA830135 Em:AI936359 Em:AW591060 FT Em:BE857173 Em:BI258091 Em:BI488606 Em:BI523689 Em:BI768136 FT Em:BI769243 Em:BI820514" FT /note="match: cDNAs: Em:BC001261.1 Em:Y18503.1" FT CDS 3850046..3851023 FT /gene="FAM50B" FT /locus_tag="RP11-420L9.1-001" FT /standard_name="OTTHUMP00000015970" FT /product="family with sequence similarity 50, member B" FT /note="match: proteins: Sw:Q14320 Sw:Q9WTJ8 Sw:Q9WV03 FT Sw:Q9Y247 Tr:O16128 Tr:Q18691" FT /protein_id="CAI13995.1" FT /translation="MAQYKGTMREAGRAMHLLKKRERQREQMEVLKQRIAEETILKSQV FT DKRFSAHYDAVEAELKSSTVGLVTLNDMKARQEALVRERERQLAKRQHLEEQRLQQERQ FT REQEQRRERKRKISCLSFALDDLDDQADAAEARRAGNLGKNPDVDTSFLPDRDREEEEN FT RLREELRQEWEAQREKVKDEEMEVTFSYWDGSGHRRTVRVRKGNTVQQFLKKALQGLRK FT DFLELRSAGVEQLMFIKEDLILPHYHTFYDFIIARARGKSGPLFSFDVHDDVRLLSDAT FT MEKDESHAGKVVLRSWYEKNKHIFPASRWEAYDPEKKWDKYTIR" FT polyA_signal 3851529..3851534 FT polyA_site 3851551 FT misc_feature 3869454 FT /note="Clone_right_end: RP11-420L9" FT misc_feature 3871455..3976872 FT /note="annotated region of clone" FT mRNA join(3893360..3893485,3893714..3893776,3894273..3894524) FT /locus_tag="RP1-140K8.1-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI393403 Em:AW072162" FT mRNA 3894074..3894524 FT /locus_tag="RP1-140K8.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA218628 Em:AA218673" FT polyA_signal 3894451..3894456 FT polyA_site 3894474 FT polyA_site 3894526 FT CDS complement(3914159..3914526) FT /pseudo FT /locus_tag="RP1-140K8.2-001" FT /product="40S ribosomal protein S25 (RPS25) pseudogene" FT /note="match: proteins: Sw:P62853" FT CDS 3922116..3922330 FT /pseudo FT /locus_tag="RP1-140K8.3-001" FT /product="high-mobility group (nonhistone chromosomal) FT protein 14 (HMG14) pseudogene" FT /note="match: proteins: Sw:P02316 Sw:P18608" FT CDS 3941539..3942032 FT /pseudo FT /locus_tag="RP1-140K8.4-001" FT /product="pseudogene similar to CREBB/EP300 inhibitory FT protein 1 CRI1" FT /note="match: proteins: Sw:P13385 Sw:P51864 Sw:P51865 FT Tr:Q7LBX7" FT misc_feature 3961734..3961761 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 3961971..3962004 FT /note="Sequence from clone PCR only" FT misc_feature 3974799 FT /note="Clone_left_end: RP3-406P24" FT misc_feature 3974872 FT /note="Clone_right_end: RP1-140K8" FT misc_feature 3976873..4026398 FT /note="annotated region of clone" FT CDS 3978296..3979333 FT /pseudo FT /locus_tag="RP3-406P24.1-001" FT /product="Thioredoxin-like (TXNL2) pseudogene" FT /note="match: proteins: Sw:O74790 Sw:O76003 Sw:P32642 FT Sw:Q02784 Sw:Q03835 Sw:Q9CQM9 Sw:Q9JLZ1 Tr:Q95X14 Tr:Q9UVH0 FT Tr:Q9VJZ6 Tr:Q9ZPH2" FT mRNA 3982907..3984364 FT /gene="C6orf50" FT /locus_tag="RP3-406P24.4-001" FT /product="chromosome 6 open reading frame 50" FT /note="match: ESTs: Em:AI305158 Em:AI887719 Em:AI918630 FT Em:AL035989 Em:BE165568" FT /note="match: cDNAs: Em:AF210650.1" FT CDS 3983402..3983710 FT /gene="C6orf50" FT /locus_tag="RP3-406P24.4-001" FT /standard_name="OTTHUMP00000015972" FT /product="chromosome 6 open reading frame 50" FT /note="match: proteins: Tr:Q9HD87" FT /protein_id="CAI20479.1" FT /translation="MANTQLDHLHYTTEFTRNDLLIICKKFNLMLMDEDIISLLAIFIK FT MCLWLWKQFLKRGSKCSETSELLEKVKLQLAFTAYKYVDICFPEQMAYSRYIRWYIH" FT mRNA complement(join(4019077..4019113,4021278..4021449)) FT /locus_tag="RP3-406P24.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA442597" FT mRNA join(4021501..4021700,AL033383.26:5495..6691, FT AL033383.26:11333..11506,AL033383.26:14708..14863, FT AL033383.26:16423..16504,AL033383.26:17749..17959, FT AL033383.26:21111..21184,AL033383.26:22952..23042, FT AL033383.26:23668..23815,AL033383.26:25893..26030, FT AL033383.26:26656..26809,AL033383.26:30257..30371, FT AL033383.26:30972..31123,AL033383.26:32664..32750, FT AL033383.26:34349..36235,AL033383.26:37010..38918) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-001" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:AA096125 Em:AF074687 Em:AI047793 FT Em:AI110780 Em:AI230682 Em:AI640883 Em:AL547477 Em:AL601058 FT Em:AU120988 Em:AU123782 Em:AU126923 Em:AU132437 Em:AU137002 FT Em:AU143392 Em:AV742973 Em:AW503322 Em:AW505336 Em:BB610884 FT Em:BB656121 Em:BB667283 Em:BB691181 Em:BB743576 Em:BB862956 FT Em:BE165420 Em:BE226203 Em:BE243013 Em:BE794769 Em:BE796197 FT Em:BF583170 Em:BF583192 Em:BF948828 Em:BG057612 Em:BG106640 FT Em:BG106943 Em:BG168253 Em:BG289756 Em:BG291355 Em:BG404518 FT Em:BG704476 Em:BG805873 Em:BG967516 Em:BG979100 Em:BI149207 FT Em:BI597440 Em:BI739523 Em:BM146065 Em:BM148298 Em:BM149543 FT Em:BM172204 Em:N73245" FT /note="match: cDNAs: Em:AB011108.1 Em:AF033663.1 FT Em:AF283465.1 Em:AK020579.1 Em:AK021274.1 Em:AY029347.1" FT mRNA join(4021560..4021700,AL033383.26:5495..6691, FT AL033383.26:11333..11506,AL033383.26:14708..14863, FT AL033383.26:16423..16504,AL033383.26:17749..17959, FT AL033383.26:21111..21184,AL033383.26:22952..23042, FT AL033383.26:23668..23815,AL033383.26:25893..26030, FT AL033383.26:26656..26809,AL033383.26:30257..30371, FT AL033383.26:30972..31123,AL033383.26:32664..32750, FT AL033383.26:34349..35843) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-011" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:BM680732.1 Em:BM973138.1 FT Em:CA420468.1" FT /note="match: cDNAs: Em:AY029347.1 Em:BC034969.1 FT Em:CR859941.1" FT CDS join(4021660..4021700,AL033383.26:5495..6691, FT AL033383.26:11333..11506,AL033383.26:14708..14863, FT AL033383.26:16423..16504,AL033383.26:17749..17959, FT AL033383.26:21111..21184,AL033383.26:22952..23042, FT AL033383.26:23668..23815,AL033383.26:25893..26030, FT AL033383.26:26656..26809,AL033383.26:30257..30371, FT AL033383.26:30972..31123,AL033383.26:32664..32750, FT AL033383.26:34349..34552) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-011" FT /standard_name="OTTHUMP00000195201" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: proteins: Sw:Q13523.2 Sw:Q61136.2 Tr:Q08DZ2.1 FT Tr:Q5R814.1 Tr:Q5RKH1.1 Tr:Q5TAY8.1 Tr:Q8IVC3.1" FT /protein_id="CAI20480.1" FT /translation="MAAAETQSLREQPEMEDANSEKSINEENGEVSEDQSQNKHSRHKK FT KKHKHRSKHKKHKHSSEEDKDKKHKHKHKHKKHKRKEIIDASDKEGMSPAKRTKLDDLA FT LLEDLEKQRALIKAELDNELMEGKVQSGMGLILQGYESGSEEEGEIHEKARNGNRSSTR FT SSSTKGKLELVDNKITTKKRSKSRSKERTRHRSDKKKSKGGIEIVKEKTTRSKSKERKK FT SKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSPIIN FT ESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENR FT SPSRRPGRSPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLER FT KRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRS FT RSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKEDKFKGSLSEGMKVEQE FT SSSDDNLEDFDVEEEDEEALIEQRRIQRQAIVQKYKYLAEDSNMSVPSEPSSPQSSTRT FT RSPSPDDILERVAADVKEYERENVDTFEASVKAKHNLMTVEQNNGSSQKKLLAPDMFTE FT SDDMFAAYFDSARLRAAGIGKDFKENPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTG FT QGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRL FT FRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNIL FT HADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGID FT MWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFM FT YIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPA FT KRISINQALQHAFIQEKI" FT misc_feature 4026225 FT /note="Clone_left_end: RP5-1013A10" FT misc_feature 4026399..4138722 FT /note="annotated region of clone" FT mRNA join(4031793..4032335,4032972..4032989,4037631..4037717) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-005" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:BF141939" FT mRNA join(4037653..4037804,4041006..4041161,4042721..4042802, FT 4044047..4044257,4047409..4047482,4049250..4049340, FT 4049966..4050113,4052191..4052328,4052954..4053107, FT 4056555..4056669,4057270..4057421,4058962..4059048, FT 4060647..4060878,4061249..4061381,4061889..4061934, FT 4062447..4062533,4062791..4062867,4063308..4063353, FT 4065035..4065217) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-003" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:BE551714" FT /note="match: cDNAs: Em:BC009844.1" FT mRNA join(4041082..4041161,4042721..4042802,4044047..4044460) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-006" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:BE045890" FT mRNA join(4041083..4041161,4042721..4042802,4044047..4044257, FT 4047409..4047482,4049250..4049340,4049966..4050113, FT 4052191..4052328,4052954..4053107,4056555..4056669, FT 4056761..4056771,4056803..4056922,4057270..4057421, FT 4058962..4059048,4060647..4061381,4061889..4061934, FT 4062447..4062533,4063308..4063353,4065035..4065217) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-002" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:AJ394383 Em:BB459748" FT /note="match: cDNAs: Em:BC003769.1" FT misc_feature 4052143 FT /note="Clone_left_end: RP3-400B16" FT misc_feature 4052146 FT /note="Clone_left_end: RP3-400B16" FT mRNA join(4052216..4052328,4052954..4053107,4056555..4057421, FT 4058962..4059124) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-007" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:BE675991 Em:BI733435" FT mRNA join(4057394..4057421,4058962..4059048,4060647..4060920, FT 4061249..4061381,4061889..4062533,4062791..4062867, FT 4063308..4063790) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-010" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:AA393802 Em:AW606831 Em:BG436518 FT Em:BG623370" FT mRNA join(4061216..4061381,4061889..4062303) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-008" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:AA393802 Em:BM149860" FT mRNA join(4061246..4061358,4061601..4062104) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-004" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:AI649389" FT polyA_signal 4062117..4062122 FT polyA_site 4062141 FT mRNA join(4062338..4062533,4062791..4062994,4063308..4063353, FT 4065035..4065217) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-009" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:AI435455 Em:AI743919 Em:H59435" FT polyA_signal 4065194..4065199 FT polyA_site 4065216 FT polyA_signal complement(4068613..4068618) FT mRNA join(AL138831.12:44703..44902,4031793..4032989, FT 4037631..4037804,4041006..4041161,4042721..4042802, FT 4044047..4044257,4047409..4047482,4049250..4049340, FT 4049966..4050113,4052191..4052328,4052954..4053107, FT 4056555..4056669,4057270..4057421,4058962..4059048, FT 4060647..4062533,4063308..4065216) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-001" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:AA096125 Em:AF074687 Em:AI047793 FT Em:AI110780 Em:AI230682 Em:AI640883 Em:AL547477 Em:AL601058 FT Em:AU120988 Em:AU123782 Em:AU126923 Em:AU132437 Em:AU137002 FT Em:AU143392 Em:AV742973 Em:AW503322 Em:AW505336 Em:BB610884 FT Em:BB656121 Em:BB667283 Em:BB691181 Em:BB743576 Em:BB862956 FT Em:BE165420 Em:BE226203 Em:BE243013 Em:BE794769 Em:BE796197 FT Em:BF583170 Em:BF583192 Em:BF948828 Em:BG057612 Em:BG106640 FT Em:BG106943 Em:BG168253 Em:BG289756 Em:BG291355 Em:BG404518 FT Em:BG704476 Em:BG805873 Em:BG967516 Em:BG979100 Em:BI149207 FT Em:BI597440 Em:BI739523 Em:BM146065 Em:BM148298 Em:BM149543 FT Em:BM172204 Em:N73245" FT /note="match: cDNAs: Em:AB011108.1 Em:AF033663.1 FT Em:AF283465.1 Em:AK020579.1 Em:AK021274.1 Em:AY029347.1" FT mRNA join(AL138831.12:44762..44902,4031793..4032989, FT 4037631..4037804,4041006..4041161,4042721..4042802, FT 4044047..4044257,4047409..4047482,4049250..4049340, FT 4049966..4050113,4052191..4052328,4052954..4053107, FT 4056555..4056669,4057270..4057421,4058962..4059048, FT 4060647..4062141) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-011" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: ESTs: Em:BM680732.1 Em:BM973138.1 FT Em:CA420468.1" FT /note="match: cDNAs: Em:AY029347.1 Em:BC034969.1 FT Em:CR859941.1" FT CDS join(AL138831.12:44862..44902,4031793..4032989, FT 4037631..4037804,4041006..4041161,4042721..4042802, FT 4044047..4044257,4047409..4047482,4049250..4049340, FT 4049966..4050113,4052191..4052328,4052954..4053107, FT 4056555..4056669,4057270..4057421,4058962..4059048, FT 4060647..4060850) FT /gene="PRPF4B" FT /locus_tag="RP5-1013A10.2-011" FT /standard_name="OTTHUMP00000195201" FT /product="PRP4 pre-mRNA processing factor 4 homolog B FT (yeast)" FT /note="match: proteins: Sw:Q13523.2 Sw:Q61136.2 Tr:Q08DZ2.1 FT Tr:Q5R814.1 Tr:Q5RKH1.1 Tr:Q5TAY8.1 Tr:Q8IVC3.1" FT /protein_id="CAI42121.1" FT /translation="MAAAETQSLREQPEMEDANSEKSINEENGEVSEDQSQNKHSRHKK FT KKHKHRSKHKKHKHSSEEDKDKKHKHKHKHKKHKRKEIIDASDKEGMSPAKRTKLDDLA FT LLEDLEKQRALIKAELDNELMEGKVQSGMGLILQGYESGSEEEGEIHEKARNGNRSSTR FT SSSTKGKLELVDNKITTKKRSKSRSKERTRHRSDKKKSKGGIEIVKEKTTRSKSKERKK FT SKSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSPIIN FT ESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENR FT SPSRRPGRSPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLER FT KRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRS FT RSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKEDKFKGSLSEGMKVEQE FT SSSDDNLEDFDVEEEDEEALIEQRRIQRQAIVQKYKYLAEDSNMSVPSEPSSPQSSTRT FT RSPSPDDILERVAADVKEYERENVDTFEASVKAKHNLMTVEQNNGSSQKKLLAPDMFTE FT SDDMFAAYFDSARLRAAGIGKDFKENPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTG FT QGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRL FT FRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNIL FT HADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGID FT MWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFM FT YIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPA FT KRISINQALQHAFIQEKI" FT CDS complement(join(4068930..4069878,4073509..4073576, FT 4073667..4073741,4074806..4074895,4077589..4077648)) FT /gene="C6orf146" FT /locus_tag="RP5-1013A10.4-001" FT /standard_name="OTTHUMP00000015980" FT /product="chromosome 6 open reading frame 146" FT /note="match: proteins: Sw:Q9D9W6" FT /protein_id="CAI42122.1" FT /translation="MGRRNENCANSLRVSNISQENLSHWNLDSEVPVSENKNLPAGRDG FT AAGGKNYLEIPVEQLMLEPNLSVHSQKSTQNSKQGIFQLWNCPLNEGSTIEKSSVEENF FT TDESDLSENEKTNDTLLSYFKKVDLNLKPETIKNVEEPFTEEPNEVFPYPDFLPPPFSA FT LDLHNLALSKSDNWKVTVDPAETSVEHLITRLLELERLQHMTIQKERPRLQTTFCTPAV FT TERPSSSKATPKVRQPKLCDSLSLQIPCVDKSQEKSKNNSGSCKLEQNALKRNWSNAGK FT YRWNSRPLSLKSSSTPKQLIETYDKNPKSSILSPCQELSFKPTIGHTNQSMVKMVSTRC FT LPWRSPMPVSPIPLTFPENQKEEIKAPKRNFGTKKKLYRQNIVLNRPFSIQKLNCLSPS FT LIAKDKCCSPIEQK" FT mRNA complement(join(4068630..4069878,4073509..4073576, FT 4073667..4073741,4074806..4074895,4077589..4077682, FT 4079126..4079455)) FT /gene="C6orf146" FT /locus_tag="RP5-1013A10.4-001" FT /product="chromosome 6 open reading frame 146" FT /note="match: ESTs: Em:BI462239 Em:BI462483" FT /note="match: cDNAs: Em:AK006388.1" FT mRNA join(4079440..4079914,4087583..4087960,4099234..4099432, FT 4122183..4122280,4126146..4126353,4130376..4130516) FT /gene="C6orf201" FT /locus_tag="RP5-1013A10.5-001" FT /product="chromosome 6 open reading frame 201" FT /note="match: ESTs: Em:AA405276 Em:AA412241 Em:AA416831 FT Em:AA442456 Em:BG718211 Em:BG721721 Em:BG724006 Em:BI829193 FT Em:BM172284" FT mRNA join(4079440..4079914,4087583..4087960,4099234..4099432, FT 4115675..4115897,4122183..4122280,4130376..4130595, FT 4130719..4131365) FT /gene="C6orf201" FT /locus_tag="RP5-1013A10.5-002" FT /product="chromosome 6 open reading frame 201" FT /note="match: ESTs: Em:AA412241 Em:AI015500 Em:BG718211 FT Em:BG721721 Em:BG722946 Em:BG724006 Em:BI461692 Em:BI829193 FT Em:BM172284" FT /note="match: cDNAs: Em:AB070194.1 Em:AK016778.1 FT Em:AK016838.1" FT mRNA join(4079443..4079914,4087583..4087960,4099234..4099432, FT 4122183..4122280,4130376..4130595,4130719..4130999) FT /gene="C6orf201" FT /locus_tag="RP5-1013A10.5-003" FT /product="chromosome 6 open reading frame 201" FT /note="match: cDNAs: Em:AF429972.1 Em:BC047663.1" FT mRNA join(4079451..4079914,4099234..4099432,4122183..4122280, FT 4125213..4126353,4130376..4130595,4130719..4130999) FT /gene="C6orf201" FT /locus_tag="RP5-1013A10.5-004" FT /product="chromosome 6 open reading frame 201" FT /note="match: cDNAs: Em:BC066986.1" FT mRNA join(4087673..4087960,4099234..4099432,4115641..4115897, FT 4122183..4122280,4125194..4126353,4130376..4130595, FT 4130719..4130992) FT /gene="C6orf201" FT /locus_tag="RP5-1013A10.5-005" FT /product="chromosome 6 open reading frame 201" FT /note="match: cDNAs: Em:AK124114.1" FT misc_feature 4108861 FT /note="Clone_right_end: RP3-406P24" FT polyA_site 4115941 FT polyA_signal 4115961..4115966 FT CDS complement(join(4116108..4116263,4117542..4117685, FT 4119420..4119509,4125484..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130647)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-007" FT /standard_name="OTTHUMP00000015979" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /protein_id="CAI42124.1" FT /translation="MFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSS FT GNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF FT DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGL FT VTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRW FT LSDECTNAVVNFLSRKSKL" FT mRNA complement(join(4126140..4126471,4127996..4128065, FT 4130606..4130794,4131001..4131102)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-002" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: ESTs: Em:AI971940" FT polyA_signal 4131332..4131337 FT polyA_site 4131358 FT CDS complement(join(4116108..4116263,4117542..4117685, FT 4119420..4119509,4125484..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130794,4131001..4131099, FT 4133783..4133890)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-006" FT /standard_name="OTTHUMP00000015978" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: proteins: Sw:O75521 Sw:Q9WUR2 Tr:O42310 FT Tr:Q99M61 Tr:Q9D785" FT /protein_id="CAI42125.1" FT /translation="MRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMP FT KPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGF FT ETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSS FT GNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLF FT DAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGL FT VTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRW FT LSDECTNAVVNFLSRKSKL" FT mRNA complement(join(4130648..4130794,4131001..4131099, FT 4133783..4133945,4135349..4135693)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-009" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: ESTs: Em:BI258575" FT mRNA complement(join(4115923..4116263,4117542..4117685, FT 4119420..4119509,4125484..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130794,4131001..4131099, FT 4133783..4133945,4135546..4135791)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-005" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: cDNAs: Em:AF153613.1" FT mRNA complement(join(4125564..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130794,4131001..4131099, FT 4133783..4133935,4135604..4135693)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-001" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT mRNA complement(join(4115923..4116263,4117542..4117685, FT 4119420..4119509,4125484..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130794,4131001..4131099, FT 4133783..4133945,4135745..4135824)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-003" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: ESTs: Em:AA380387 Em:AL533411 Em:BE185082 FT Em:BE264087 Em:BE515226 Em:BE777466 Em:BF128005 Em:BF209241 FT Em:BF692906 Em:BF790299 Em:BF796742 Em:BF964969 Em:BG254971 FT Em:BG427245 Em:BG428771 Em:BI258575 Em:BI546227 Em:BI603697 FT Em:BI715252 Em:N55668" FT /note="match: cDNAs: Em:AF153612.1 Em:AF244138.1 FT Em:AL136642.1 Em:BC002668.1" FT CDS complement(join(4116108..4116263,4117542..4117685, FT 4119420..4119509,4125484..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130794,4131001..4131099, FT 4133783..4133945,4135745..4135794)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-003" FT /standard_name="OTTHUMP00000015976" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: proteins: Sw:O75521" FT /protein_id="CAI42127.1" FT /translation="MAMAYLAWRLARRSCPSSLQVTSFPVVQLHMNRTAMRASQKDFEN FT SMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPK FT EAARQNYVDLVSSLSPSLESSSQVEPGTDRKSTGFETLVVTSEDGITKIMFNRPKKKNA FT INTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAV FT LLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEG FT CSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKL FT PPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL" FT mRNA complement(join(4115923..4116263,4117542..4117685, FT 4119420..4119509,4125484..4126471,4127996..4128065, FT 4130606..4130794,4131001..4131099,4133783..4133935, FT 4135745..4135793)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-004" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: ESTs: Em:AI971940" FT /note="match: cDNAs: Em:AF257175.1" FT mRNA complement(join(4115923..4116263,4117542..4117685, FT 4119420..4119509,4125484..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130794,4131001..4131099, FT 4133783..4133935,4135745..4135824)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-006" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: ESTs: Em:AL518078 Em:AW957745 Em:BE797223 FT Em:BF238207 Em:BG718785 Em:BG751298 Em:BM041057 Em:BM043034 FT Em:BM049559" FT /note="match: cDNAs: Em:AF069301.1 Em:AF257175.1 FT Em:BC008458.1 Em:BC016781.1 Em:BC017474.1 Em:D17030.1" FT mRNA complement(join(4115923..4116263,4117542..4117685, FT 4119420..4119509,4125484..4125604,4126369..4126471, FT 4127996..4128065,4130606..4130876,4131001..4131099, FT 4133783..4133945,4135745..4135824)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-007" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: cDNAs: Em:AK057175.1" FT mRNA complement(join(4125564..4125595,4126369..4126471, FT 4127996..4128065,4130413..4130483,4130606..4130794, FT 4131001..4131099,4133783..4133935,4135745..4135793)) FT /gene="PECI" FT /locus_tag="RP5-1013A10.1-008" FT /product="peroxisomal D3,D2-enoyl-CoA isomerase" FT /note="match: ESTs: Em:AU143562 Em:BI113996" FT misc_feature 4138622 FT /note="Clone_right_end: RP5-1013A10" FT misc_feature 4138723..4212227 FT /note="annotated region of clone" FT mRNA join(4155170..4155227,4155715..4156133) FT /locus_tag="RP3-400B16.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA853982 Em:AI808903" FT mRNA complement(join(4186858..4187003,4188224..4188343)) FT /locus_tag="RP3-400B16.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI964060" FT CDS 4189160..4190040 FT /pseudo FT /locus_tag="RP3-400B16.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:P06798 Sw:P37088 Tr:P37088 FT Tr:Q8VE10 Tr:Q9D4I5 Tr:Q9H897" FT misc_feature 4212127 FT /note="Clone_right_end: RP3-400B16" FT misc_feature 4212228..4275323 FT /note="annotated region of clone" FT mRNA join(4226935..4227101,4227437..4227505) FT /locus_tag="RP11-625P7.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI242650" FT misc_feature 4275124 FT /note="Clone_left_end: RP3-527G5" FT misc_feature 4275324..4347362 FT /note="annotated region of clone" FT misc_feature 4347163 FT /note="Clone_left_end: RP11-274H24" FT mRNA complement(join(4345977..4346040,4346866..4347103, FT 4347243..4347271)) FT /locus_tag="RP3-527G5.1-001" FT /product="putative novel protein" FT /note="match: ESTs: Em:AL121205" FT misc_feature 4398177 FT /note="Clone_right_end: RP3-527G5" FT misc_feature 4451414 FT /note="Clone_left_end: RP1-21P18" FT misc_feature 4526034 FT /note="Clone_right_end: RP11-274H24" FT misc_feature 4549947 FT /note="Clone_left_end: RP4-529N6" FT misc_feature 4550147..4681865 FT /note="annotated region of clone" FT mRNA join(4610890..4611046,4611212..4611538) FT /locus_tag="RP4-529N6.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI248169 Em:BG281859 Em:N27492" FT misc_feature 4681765 FT /note="Clone_right_end: RP4-529N6" FT misc_feature 4681866..4764686 FT /note="annotated region of clone" FT CDS 4702697..4704013 FT /pseudo FT /locus_tag="RP11-620A17.1-001" FT /product="26S protease regulatory subunit 4 (PSMC1) FT pseudogene" FT /note="match: proteins: Sw:O16368 Sw:P36612 Sw:P40327 FT Sw:P46466 Sw:P46502 Sw:P48601 Sw:P62193 Sw:P62193 Sw:P81294 FT Sw:Q90732 Tr:O57941 Tr:O58420 Tr:O59027 Tr:O59516 Tr:Q9Y909 FT Tr:Q9YAC5 Tr:Q9YC82" FT mRNA join(4706345..4706485,4715975..4716115,4733393..4733482, FT complement(AL022725.8:117301..117469), FT complement(AL022725.8:2006..2396),AL359643.27:41507..41615) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-002" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:AA305559.1 Em:BF112280 Em:BM538927.1 FT Em:BM540116.1" FT mRNA join(4706393..4706485,4715975..4716115,4734996..4735078, FT complement(AL022725.8:1730..2396),AL359643.27:41507..41763, FT AL359643.27:43557..43729,AL359643.27:49538..49748, FT AL359643.27:58258..58401,AL359643.27:59890..61539) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-001" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:AA080272 Em:AA113450 Em:AA144160 FT Em:AA279250 Em:AA305559 Em:AA350381 Em:AA675688 Em:AA771990 FT Em:AI033930 Em:AI207040 Em:AI345683 Em:AI540159 Em:AL556411 FT Em:AW195121 Em:AW298379 Em:AW369800 Em:AW957363 Em:BE782401 FT Em:BE909759 Em:BF172358 Em:BF369133 Em:BF380091 Em:BF380094 FT Em:BF435463 Em:BF588573 Em:BF791746 Em:BF908333 Em:BG006890 FT Em:BG779095 Em:BG863310 Em:BG944185 Em:BG958132 Em:BG958281 FT Em:BI259422 Em:BI767492 Em:BM311020 Em:BM311610 Em:R56412" FT /note="match: cDNAs: Em:AF000981.1 Em:AF080597.1 FT Em:AF080598.1 Em:AF081258.1 Em:AF081259.1 Em:AF081260.1 FT Em:AF081261.1 Em:AJ314841.1 Em:AL050164" FT CDS join(4716013..4716115,4734996..4735078, FT complement(AL022725.8:1730..2396),AL359643.27:41507..41763, FT AL359643.27:43557..43729,AL359643.27:49538..49748, FT AL359643.27:58258..58401,AL359643.27:59890..60048) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-001" FT /standard_name="OTTHUMP00000015984" FT /product="chromodomain protein, Y-like" FT /note="match: proteins: Sw:Q9WTK2 Sw:Q9Y232 Sw:Q9Y6F7 FT Sw:Q9Y6F8 Sw:Q9Y6F8 Tr:Q95KT5 Tr:Q95LK7 Tr:Q9BWZ2 FT Tr:Q9CVU3" FT /protein_id="CAC36888.2" FT /translation="MTFQASHRSAWGKSRKKNWQYEGPTQKLFLKRNNVSAPDGPSDPS FT ISVSSEQSGAQQPPALQVERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEE FT YIHDFNRRHTEKQKESTLTRTNRTSPNNARKQISRSTNSNFSKTSPKALVIGKDHESKN FT SQLFAASQKFRKNTAPSLSSRKNMDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDP FT VEQGQEDTVAPEVAAEKPVGALLGPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAV FT NGKGTSPFMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYR FT YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVF FT CCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILP FT LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGK FT GLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKK FT IWGSAQGMDSMLKYLQRKIDEF" FT misc_feature 4764487 FT /note="Clone_left_end: RP3-430A16" FT misc_feature complement(4764687..4894342) FT /note="annotated region of clone" FT mRNA join(4890232..4890360,4891947..4892613, FT AL359643.27:41507..41598) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-003" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:BQ439180.1" FT misc_feature complement(4882599..4882667) FT /note="Single clone region" FT misc_feature complement(4882554..4882560) FT /note="Single clone region" FT misc_feature complement(4882053..4882137) FT /note="Single clone region" FT mRNA join(AL356747.18:24580..24720,AL356747.18:34210..34350, FT AL356747.18:51628..51717,4776874..4777042,4891947..4892337, FT AL359643.27:41507..41615) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-002" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:AA305559.1 Em:BF112280 Em:BM538927.1 FT Em:BM540116.1" FT mRNA join(AL356747.18:24628..24720,AL356747.18:34210..34350, FT AL356747.18:53231..53313,4891947..4892613, FT AL359643.27:41507..41763,AL359643.27:43557..43729, FT AL359643.27:49538..49748,AL359643.27:58258..58401, FT AL359643.27:59890..61539) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-001" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:AA080272 Em:AA113450 Em:AA144160 FT Em:AA279250 Em:AA305559 Em:AA350381 Em:AA675688 Em:AA771990 FT Em:AI033930 Em:AI207040 Em:AI345683 Em:AI540159 Em:AL556411 FT Em:AW195121 Em:AW298379 Em:AW369800 Em:AW957363 Em:BE782401 FT Em:BE909759 Em:BF172358 Em:BF369133 Em:BF380091 Em:BF380094 FT Em:BF435463 Em:BF588573 Em:BF791746 Em:BF908333 Em:BG006890 FT Em:BG779095 Em:BG863310 Em:BG944185 Em:BG958132 Em:BG958281 FT Em:BI259422 Em:BI767492 Em:BM311020 Em:BM311610 Em:R56412" FT /note="match: cDNAs: Em:AF000981.1 Em:AF080597.1 FT Em:AF080598.1 Em:AF081258.1 Em:AF081259.1 Em:AF081260.1 FT Em:AF081261.1 Em:AJ314841.1 Em:AL050164" FT CDS join(AL356747.18:34248..34350,AL356747.18:53231..53313, FT 4891947..4892613,AL359643.27:41507..41763, FT AL359643.27:43557..43729,AL359643.27:49538..49748, FT AL359643.27:58258..58401,AL359643.27:59890..60048) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-001" FT /standard_name="OTTHUMP00000015984" FT /product="chromodomain protein, Y-like" FT /note="match: proteins: Sw:Q9WTK2 Sw:Q9Y232 Sw:Q9Y6F7 FT Sw:Q9Y6F8 Sw:Q9Y6F8 Tr:Q95KT5 Tr:Q95LK7 Tr:Q9BWZ2 FT Tr:Q9CVU3" FT /protein_id="CAI20892.1" FT /translation="MTFQASHRSAWGKSRKKNWQYEGPTQKLFLKRNNVSAPDGPSDPS FT ISVSSEQSGAQQPPALQVERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEE FT YIHDFNRRHTEKQKESTLTRTNRTSPNNARKQISRSTNSNFSKTSPKALVIGKDHESKN FT SQLFAASQKFRKNTAPSLSSRKNMDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDP FT VEQGQEDTVAPEVAAEKPVGALLGPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAV FT NGKGTSPFMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYR FT YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVF FT CCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILP FT LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGK FT GLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKK FT IWGSAQGMDSMLKYLQRKIDEF" FT misc_feature complement(4764687) FT /note="Clone_left_end: RP3-430A16" FT misc_feature 4894343..5061105 FT /note="annotated region of clone" FT mRNA join(complement(AL022725.8:3983..4111), FT complement(AL022725.8:1730..2396),4935749..4935840) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-003" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:BQ439180.1" FT mRNA join(AL356747.18:24580..24720,AL356747.18:34210..34350, FT AL356747.18:51628..51717, FT complement(AL022725.8:117301..117469), FT complement(AL022725.8:2006..2396),4935749..4935857) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-002" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:AA305559.1 Em:BF112280 Em:BM538927.1 FT Em:BM540116.1" FT mRNA join(AL356747.18:24628..24720,AL356747.18:34210..34350, FT AL356747.18:53231..53313,complement(AL022725.8:1730..2396), FT 4935749..4936005,4937799..4937971,4943780..4943990, FT 4952500..4952643,4954132..4955781) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-001" FT /product="chromodomain protein, Y-like" FT /note="match: ESTs: Em:AA080272 Em:AA113450 Em:AA144160 FT Em:AA279250 Em:AA305559 Em:AA350381 Em:AA675688 Em:AA771990 FT Em:AI033930 Em:AI207040 Em:AI345683 Em:AI540159 Em:AL556411 FT Em:AW195121 Em:AW298379 Em:AW369800 Em:AW957363 Em:BE782401 FT Em:BE909759 Em:BF172358 Em:BF369133 Em:BF380091 Em:BF380094 FT Em:BF435463 Em:BF588573 Em:BF791746 Em:BF908333 Em:BG006890 FT Em:BG779095 Em:BG863310 Em:BG944185 Em:BG958132 Em:BG958281 FT Em:BI259422 Em:BI767492 Em:BM311020 Em:BM311610 Em:R56412" FT /note="match: cDNAs: Em:AF000981.1 Em:AF080597.1 FT Em:AF080598.1 Em:AF081258.1 Em:AF081259.1 Em:AF081260.1 FT Em:AF081261.1 Em:AJ314841.1 Em:AL050164" FT CDS join(AL356747.18:34248..34350,AL356747.18:53231..53313, FT complement(AL022725.8:1730..2396),4935749..4936005, FT 4937799..4937971,4943780..4943990,4952500..4952643, FT 4954132..4954290) FT /gene="CDYL" FT /locus_tag="RP11-428J1.1-001" FT /standard_name="OTTHUMP00000015984" FT /product="chromodomain protein, Y-like" FT /note="match: proteins: Sw:Q9WTK2 Sw:Q9Y232 Sw:Q9Y6F7 FT Sw:Q9Y6F8 Sw:Q9Y6F8 Tr:Q95KT5 Tr:Q95LK7 Tr:Q9BWZ2 FT Tr:Q9CVU3" FT /protein_id="CAH73737.1" FT /translation="MTFQASHRSAWGKSRKKNWQYEGPTQKLFLKRNNVSAPDGPSDPS FT ISVSSEQSGAQQPPALQVERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEE FT YIHDFNRRHTEKQKESTLTRTNRTSPNNARKQISRSTNSNFSKTSPKALVIGKDHESKN FT SQLFAASQKFRKNTAPSLSSRKNMDLAKSGIKILVPKSPVKSRTAVDGFQSESPEKLDP FT VEQGQEDTVAPEVAAEKPVGALLGPGAERARMGSRPRIHPLVPQVPGPVTAAMATGLAV FT NGKGTSPFMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYR FT YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVF FT CCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILP FT LCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGK FT GLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKK FT IWGSAQGMDSMLKYLQRKIDEF" FT polyA_signal 4955754..4955759 FT polyA_site 4955781 FT misc_feature 4956230 FT /note="Clone_left_end: RP11-530A18" FT CDS 4979306..4979728 FT /pseudo FT /locus_tag="RP11-428J1.2-001" FT /product="ribosomal protein S18 (RPS18) pseudogene" FT /note="match: proteins: Sw:P34788 Sw:P34788 Sw:P34788 FT Sw:P41094 Sw:P62270 Sw:P62270 Sw:P62271 Sw:Q90YQ5 Sw:Q962R1 FT Sw:Q9V1A0 Tr:O18240 Tr:Q9GPA9" FT CDS complement(join(4995312..4995510,4996185..4996319, FT 4996456..4996654,4998950..4999075,5000043..5000138, FT 5000797..5000865,5002335..5002422)) FT /gene="RPP40" FT /locus_tag="RP11-428J1.3-001" FT /standard_name="OTTHUMP00000015982" FT /product="ribonuclease P/MRP 40kDa subunit" FT /note="match: proteins: Sw:O75818" FT /protein_id="CAH73740.1" FT /translation="MNTGPYYFVKNLPLHELITPEFISTFIKKGSCYALTYNTHIDEDN FT TVALLPNGKLILSLDKDTYEETGLQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYER FT ISWSFKEKKPLKFDFLLAWHKTGSEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQ FT SSELEGTPEVSCRALELFDWLGAVFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTIT FT GFILPEKICLLLEHLCHYFDEPKLAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNF FT VIFNNQDYWLQMAVGANDHCPP" FT CDS complement(join(4995312..4995510,4996185..4996319, FT 4996456..4996654,4998950..4999075,5000043..5000138, FT 5002335..5002422)) FT /gene="RPP40" FT /locus_tag="RP11-428J1.3-002" FT /standard_name="OTTHUMP00000015983" FT /product="ribonuclease P/MRP 40kDa subunit" FT /note="match: proteins: Tr:Q8WVK8" FT /protein_id="CAH73739.1" FT /translation="MNTGPYYFVKNLPLHELITPEFISTFIKKGKLILSLDKDTYEETG FT LQGHPSQFSGRKIMKFIVSIDLMELSLNLDSKKYERISWSFKEKKPLKFDFLLAWHKTG FT SEESTMMSYFSKYQIQEHQPKVALSTLRDLQCPVLQSSELEGTPEVSCRALELFDWLGA FT VFSNVDLNNEPNNFISTYCCPEPSTVVAKAYLCTITGFILPEKICLLLEHLCHYFDEPK FT LAPWVTLSVQGFADSPVSWEKNEHGFRKGGEHLYNFVIFNNQDYWLQMAVGANDHCPP" FT mRNA complement(join(4995312..4995510,4996185..4996319, FT 4996456..4996654,4998950..4999075,5000043..5000138, FT 5000797..5000865,5002335..5002479,5004114..5004270)) FT /gene="RPP40" FT /locus_tag="RP11-428J1.3-001" FT /product="ribonuclease P/MRP 40kDa subunit" FT /note="match: ESTs: Em:AI505400 Em:BE549407 Em:BE786348 FT Em:BF028677 Em:BF140385 Em:BF382082 Em:BF442872 Em:BG037131 FT Em:BG430780 Em:BG568109 Em:BG609287 Em:BG615884 Em:BI092443 FT Em:BI545378 Em:BI602232 Em:BI826512 Em:BM015573" FT mRNA complement(join(4995312..4995510,4996185..4996319, FT 4996456..4996654,4998950..4999075,5000043..5000138, FT 5002335..5002479,5004114..5004257)) FT /gene="RPP40" FT /locus_tag="RP11-428J1.3-002" FT /product="ribonuclease P/MRP 40kDa subunit" FT /note="match: ESTs: Em:BF667148" FT misc_feature 5026632..5026749 FT /note="Sequence from overlapping clones bK502H6(AL139096) FT and bA530A18 (AL139094). Assembly confirmed by restriction FT digest" FT misc_feature 5035712 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 200bp by restriction digest data" FT misc_feature 5061005 FT /note="Clone_right_end: RP11-428J1" FT misc_feature 5061106..5073109 FT /note="annotated region of clone" FT CDS complement(5066029..5067216) FT /pseudo FT /locus_tag="RP11-530A18.1-001" FT /product="similar to mouse house-keeping protein 1 (HKP1) FT pseudogene" FT /note="match: proteins: Sw:O84358 Sw:P78697 Sw:Q9RU68 FT Sw:Q9Z6K0 Tr:Q61669 Tr:Q9XBC9" FT misc_feature 5072910 FT /note="Clone_left_end: RP1-67E13" FT misc_feature 5073110..5206774 FT /note="annotated region of clone" FT mRNA 5084815..5087450 FT /locus_tag="RP1-67E13.1-001" FT /product="novel protein possible ortholog of mouse protein FT phosphatase 1, regulatory (inhibitor) subunit 3G (Ppp1r3g)" FT /note="match: cDNAs: Em:AB172507.1" FT /note="match: ESTs: Em:AW269895.1 Em:BF726738.1" FT CDS 5085720..5086796 FT /locus_tag="RP1-67E13.1-001" FT /standard_name="OTTHUMP00000209238" FT /product="novel protein possible ortholog of mouse protein FT phosphatase 1, regulatory (inhibitor) subunit 3G (Ppp1r3g)" FT /protein_id="CAI22358.2" FT /translation="MEPIGARLSLEAPGPAPFREAPPAEELPAPVVPCVQGGGDGGGAS FT ETPSPDAQLGDRPLSPKEEAAPQEQEELLECRRRCRARSFSLPADPILQAAKFLQQQQQ FT QAVALGGEGAEDAQLGPGGCCAKCKKRVQFADTLGLSLASVKHFSEAEEPQVPPAVLSR FT LRSFPMRAEDLEQLGGLLAAAAVAAPLSAPPSRLRPLFQLPGPSAAAERLQRQRVCLER FT VQCSTASGAEVKGSGRVLSCPGPRAVTVRYTFTEWRSFLDVPAELQPEPLEPQQPEAPS FT GASEPGSGDAKKEPGAECFHFSLCLPPGLQPEDEEDADERGVAVHFAVCYRCAQGEYWD FT NNAGANYTLRYARPADAL" FT misc_feature 5086023..5086185 FT /note="Single clone region" FT misc_feature 5086274..5086336 FT /note="Single clone region" FT polyA_signal 5087428..5087433 FT polyA_site 5087450 FT polyA_site complement(5109293) FT polyA_signal complement(5109323..5109328) FT mRNA complement(join(5109293..5109725,5132952..5133031)) FT /locus_tag="RP1-67E13.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA024776 Em:AA041185 Em:AA329661 FT Em:AA487751 Em:AA528686 Em:AA629351 Em:AA676766 Em:AA737822 FT Em:AA741168 Em:AA746712 Em:AA806250 Em:AA806253 Em:AA935286 FT Em:AA973406 Em:AI183701 Em:AI188987 Em:AI192714 Em:AI306570 FT Em:AI306571 Em:AI347268 Em:AI355674 Em:AI435032 Em:AI621104 FT Em:AI653737 Em:AI659008 Em:AI694894 Em:H09874 Em:T35612 FT Em:W05108 Em:W05114 Em:W72758 Em:W77957" FT /note="match: cDNAs: Em:AF088060 Em:AF285118.1 FT Em:BC009552.1" FT misc_feature 5206674 FT /note="Clone_right_end: RP1-67E13" FT misc_feature 5206775..5225850 FT /note="annotated region of clone" FT misc_feature 5225651 FT /note="Clone_left_end: RP3-520B18" FT misc_feature 5225851..5374135 FT /note="annotated region of clone" FT mRNA complement(join(5240759..5240956,5260881..5260954)) FT /locus_tag="RP3-520B18.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF694218" FT CDS complement(join(5291291..5291369,5291422..5291628)) FT /pseudo FT /locus_tag="RP3-520B18.1-001" FT /product="microtubule-associated protein 1A/1B light chain FT 3 pseudogene" FT /note="match: proteins: Sw:O41515 Sw:Q62625" FT mRNA join(5368783..5369415,AL590868.10:32640..32799, FT AL590868.10:59139..59270,AL392184.7:9387..9547, FT AL022097.1:34584..34735,AL133473.5:43666..43955) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: cDNAs: Em:AF097441 Em:AF097441.1 Em:AF161438 FT Em:AF161438.1 Em:AK013211.1 Em:AK020164.1 Em:BC002147.1 FT Em:BC020239.1 Em:BC021112.1" FT /note="match: ESTs: Em:AA203629 Em:AA380366 Em:AA486503 FT Em:AA486503.1 Em:AA488691 Em:AA586600 Em:AA724346 FT Em:AA775174 Em:AA856512 Em:AA885284 Em:AA919057 Em:AA931994 FT Em:AA971062 Em:AI338405 Em:AI419829 Em:AI427504 Em:AI675892 FT Em:AI796358 Em:AI827016 Em:AI910737 Em:AI911761 Em:AI971880 FT Em:AL514551 Em:AL514552 Em:AL521770 Em:AL521771 Em:AL523162 FT Em:AL523163 Em:AL523994 Em:AL526644 Em:AL526673 Em:AL529627 FT Em:AL529628 Em:AL530356 Em:AL536987 Em:AL539617 Em:AL544087 FT Em:AL558979 Em:AL562296 Em:AL563718 Em:AL567954 Em:AL570306 FT Em:AL580690 Em:AV717844 Em:AV736932 Em:AW070888 Em:AW270897 FT Em:AW449443 Em:AW452980 Em:AW661842 Em:AW772395 Em:AW805734 FT Em:AW954431 Em:BB774036 Em:BB778915 Em:BE094254 Em:BE260413 FT Em:BE377295 Em:BE465898 Em:BE669657 Em:BE702313 Em:BE730806 FT Em:BE869187 Em:BF094839 Em:BF317314 Em:BF477355 Em:BF477386 FT Em:BF514670 Em:BF514954 Em:BF515833 Em:BF525040 Em:BF583317 FT Em:BF589949 Em:BF592033 Em:BF785992 Em:BG181828 Em:BG182854 FT Em:BG187050 Em:BG189733 Em:BG191246 Em:BG192794 Em:BG195820 FT Em:BG195821 Em:BG200988 Em:BG206211 Em:BG212473 Em:BG212992 FT Em:BG212993 Em:BG213519 Em:BG214584 Em:BG216750 Em:BG216751 FT Em:BG419816 Em:BG431967 Em:BI413408 Em:BI438562 Em:BI439652 FT Em:BI457125 Em:BI761156 Em:BI764581 Em:BI765877 Em:BI766005 FT Em:BI822164 Em:BI823970 Em:BI826294 Em:BI909293 Em:BI910194 FT Em:F09482 Em:R18207 Em:W68658 Em:W68658.1 Em:W68659 FT Em:W86087.1 Em:W86088 Em:W86873 Em:Z40831" FT CDS join(5368804..5369415,AL590868.10:32640..32799, FT AL590868.10:59139..59270,AL392184.7:9387..9547, FT AL022097.1:34584..34735,AL133473.5:43666..43804) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /standard_name="OTTHUMP00000015986" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: proteins: Sw:O16129 Sw:O95363 Sw:P08425 FT Sw:P27001 Sw:P56146 Sw:P75564 Sw:P94984 Sw:Q99M01 Sw:Q9KSN7 FT Sw:Q9PP34 Sw:Q9RRX8 Sw:Q9ZKF9 Tr:O74952 Tr:Q94K73 Tr:Q9M2K2 FT Tr:Q9P465 Tr:Q9P5U0 Tr:Q9U1Z3 Tr:Q9YAY9" FT /protein_id="CAI21657.1" FT /translation="MVGSALRRGAHAYVYLVSKASHISRGHQHQAWGSRPPAAECATQR FT APGSVVELLGKSYPQDDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGR FT FGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDL FT LHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSS FT RSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF FT HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFL FT KQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLI FT DKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF" FT misc_feature 5374035 FT /note="Clone_right_end: RP3-520B18" FT misc_feature 5374136..5443392 FT /note="annotated region of clone" FT CDS join(<5404775..5404934,5431274..5431405,5431902..5431915) FT /codon_start=1 FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-002" FT /standard_name="OTTHUMP00000015987" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /protein_id="CAI39441.1" FT /translation="LFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTR FT LMAHLFGDELEIRWVDCYFPFTHPSFEMEINFHGEWLEVLGCGVMEQQLVNSGGAT" FT mRNA join(<5404775..5404934,5431274..5431405,5431902..5432043) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-002" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: ESTs: Em:BE465898.1" FT polyA_signal 5432017..5432022 FT polyA_site 5432043 FT misc_feature 5439393 FT /note="Clone_left_end: RP1-232P20" FT mRNA join(AL121978.5:143033..143665,5404775..5404934, FT 5431274..5431405,AL392184.7:9387..9547, FT AL022097.1:34584..34735,AL133473.5:43666..43955) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: ESTs: Em:AA203629 Em:AA380366 Em:AA486503 FT Em:AA486503.1 Em:AA488691 Em:AA586600 Em:AA724346 FT Em:AA775174 Em:AA856512 Em:AA885284 Em:AA919057 Em:AA931994 FT Em:AA971062 Em:AI338405 Em:AI419829 Em:AI427504 Em:AI675892 FT Em:AI796358 Em:AI827016 Em:AI910737 Em:AI911761 Em:AI971880 FT Em:AL514551 Em:AL514552 Em:AL521770 Em:AL521771 Em:AL523162 FT Em:AL523163 Em:AL523994 Em:AL526644 Em:AL526673 Em:AL529627 FT Em:AL529628 Em:AL530356 Em:AL536987 Em:AL539617 Em:AL544087 FT Em:AL558979 Em:AL562296 Em:AL563718 Em:AL567954 Em:AL570306 FT Em:AL580690 Em:AV717844 Em:AV736932 Em:AW070888 Em:AW270897 FT Em:AW449443 Em:AW452980 Em:AW661842 Em:AW772395 Em:AW805734 FT Em:AW954431 Em:BB774036 Em:BB778915 Em:BE094254 Em:BE260413 FT Em:BE377295 Em:BE465898 Em:BE669657 Em:BE702313 Em:BE730806 FT Em:BE869187 Em:BF094839 Em:BF317314 Em:BF477355 Em:BF477386 FT Em:BF514670 Em:BF514954 Em:BF515833 Em:BF525040 Em:BF583317 FT Em:BF589949 Em:BF592033 Em:BF785992 Em:BG181828 Em:BG182854 FT Em:BG187050 Em:BG189733 Em:BG191246 Em:BG192794 Em:BG195820 FT Em:BG195821 Em:BG200988 Em:BG206211 Em:BG212473 Em:BG212992 FT Em:BG212993 Em:BG213519 Em:BG214584 Em:BG216750 Em:BG216751 FT Em:BG419816 Em:BG431967 Em:BI413408 Em:BI438562 Em:BI439652 FT Em:BI457125 Em:BI761156 Em:BI764581 Em:BI765877 Em:BI766005 FT Em:BI822164 Em:BI823970 Em:BI826294 Em:BI909293 Em:BI910194 FT Em:F09482 Em:R18207 Em:W68658 Em:W68658.1 Em:W68659 FT Em:W86087.1 Em:W86088 Em:W86873 Em:Z40831" FT /note="match: cDNAs: Em:AF097441 Em:AF097441.1 Em:AF161438 FT Em:AF161438.1 Em:AK013211.1 Em:AK020164.1 Em:BC002147.1 FT Em:BC020239.1 Em:BC021112.1" FT CDS join(AL121978.5:143054..143665,5404775..5404934, FT 5431274..5431405,AL392184.7:9387..9547, FT AL022097.1:34584..34735,AL133473.5:43666..43804) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /standard_name="OTTHUMP00000015986" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: proteins: Sw:O16129 Sw:O95363 Sw:P08425 FT Sw:P27001 Sw:P56146 Sw:P75564 Sw:P94984 Sw:Q99M01 Sw:Q9KSN7 FT Sw:Q9PP34 Sw:Q9RRX8 Sw:Q9ZKF9 Tr:O74952 Tr:Q94K73 Tr:Q9M2K2 FT Tr:Q9P465 Tr:Q9P5U0 Tr:Q9U1Z3 Tr:Q9YAY9" FT /protein_id="CAI39442.1" FT /translation="MVGSALRRGAHAYVYLVSKASHISRGHQHQAWGSRPPAAECATQR FT APGSVVELLGKSYPQDDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGR FT FGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDL FT LHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSS FT RSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF FT HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFL FT KQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLI FT DKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF" FT misc_feature 5443393..5536126 FT /note="annotated region of clone" FT misc_feature 5534126 FT /note="Clone_right_end: RP1-232P20" FT misc_feature 5536127..5578918 FT /note="annotated region of clone" FT misc_feature 5578719 FT /note="Clone_left_end: RP1-256G22" FT mRNA join(AL121978.5:143033..143665,AL590868.10:32640..32799, FT AL590868.10:59139..59270,5545413..5545573, FT AL022097.1:34584..34735,AL133473.5:43666..43955) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: ESTs: Em:AA203629 Em:AA380366 Em:AA486503 FT Em:AA486503.1 Em:AA488691 Em:AA586600 Em:AA724346 FT Em:AA775174 Em:AA856512 Em:AA885284 Em:AA919057 Em:AA931994 FT Em:AA971062 Em:AI338405 Em:AI419829 Em:AI427504 Em:AI675892 FT Em:AI796358 Em:AI827016 Em:AI910737 Em:AI911761 Em:AI971880 FT Em:AL514551 Em:AL514552 Em:AL521770 Em:AL521771 Em:AL523162 FT Em:AL523163 Em:AL523994 Em:AL526644 Em:AL526673 Em:AL529627 FT Em:AL529628 Em:AL530356 Em:AL536987 Em:AL539617 Em:AL544087 FT Em:AL558979 Em:AL562296 Em:AL563718 Em:AL567954 Em:AL570306 FT Em:AL580690 Em:AV717844 Em:AV736932 Em:AW070888 Em:AW270897 FT Em:AW449443 Em:AW452980 Em:AW661842 Em:AW772395 Em:AW805734 FT Em:AW954431 Em:BB774036 Em:BB778915 Em:BE094254 Em:BE260413 FT Em:BE377295 Em:BE465898 Em:BE669657 Em:BE702313 Em:BE730806 FT Em:BE869187 Em:BF094839 Em:BF317314 Em:BF477355 Em:BF477386 FT Em:BF514670 Em:BF514954 Em:BF515833 Em:BF525040 Em:BF583317 FT Em:BF589949 Em:BF592033 Em:BF785992 Em:BG181828 Em:BG182854 FT Em:BG187050 Em:BG189733 Em:BG191246 Em:BG192794 Em:BG195820 FT Em:BG195821 Em:BG200988 Em:BG206211 Em:BG212473 Em:BG212992 FT Em:BG212993 Em:BG213519 Em:BG214584 Em:BG216750 Em:BG216751 FT Em:BG419816 Em:BG431967 Em:BI413408 Em:BI438562 Em:BI439652 FT Em:BI457125 Em:BI761156 Em:BI764581 Em:BI765877 Em:BI766005 FT Em:BI822164 Em:BI823970 Em:BI826294 Em:BI909293 Em:BI910194 FT Em:F09482 Em:R18207 Em:W68658 Em:W68658.1 Em:W68659 FT Em:W86087.1 Em:W86088 Em:W86873 Em:Z40831" FT /note="match: cDNAs: Em:AF097441 Em:AF097441.1 Em:AF161438 FT Em:AF161438.1 Em:AK013211.1 Em:AK020164.1 Em:BC002147.1 FT Em:BC020239.1 Em:BC021112.1" FT CDS join(AL121978.5:143054..143665,AL590868.10:32640..32799, FT AL590868.10:59139..59270,5545413..5545573, FT AL022097.1:34584..34735,AL133473.5:43666..43804) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /standard_name="OTTHUMP00000015986" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: proteins: Sw:O16129 Sw:O95363 Sw:P08425 FT Sw:P27001 Sw:P56146 Sw:P75564 Sw:P94984 Sw:Q99M01 Sw:Q9KSN7 FT Sw:Q9PP34 Sw:Q9RRX8 Sw:Q9ZKF9 Tr:O74952 Tr:Q94K73 Tr:Q9M2K2 FT Tr:Q9P465 Tr:Q9P5U0 Tr:Q9U1Z3 Tr:Q9YAY9" FT /protein_id="CAI20375.1" FT /translation="MVGSALRRGAHAYVYLVSKASHISRGHQHQAWGSRPPAAECATQR FT APGSVVELLGKSYPQDDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGR FT FGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDL FT LHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSS FT RSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF FT HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFL FT KQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLI FT DKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF" FT misc_feature 5578919..5727958 FT /note="annotated region of clone" FT CDS complement(5609460..5610428) FT /pseudo FT /locus_tag="RP1-256G22.1-001" FT /product="heterogeneous nuclear ribonucleoprotein A0 FT (HNRPA0) pseudogene" FT /note="match: proteins: Sw:P04256 Sw:P09651 Sw:P17130 FT Sw:P22626 Sw:P49312 Sw:P51968 Sw:P51991 Sw:P51992 FT Sw:Q28521" FT mRNA join(AL121978.5:143033..143665,AL590868.10:32640..32799, FT AL590868.10:59139..59270,AL392184.7:9387..9547, FT 5613402..5613553,AL133473.5:43666..43955) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: ESTs: Em:AA203629 Em:AA380366 Em:AA486503 FT Em:AA486503.1 Em:AA488691 Em:AA586600 Em:AA724346 FT Em:AA775174 Em:AA856512 Em:AA885284 Em:AA919057 Em:AA931994 FT Em:AA971062 Em:AI338405 Em:AI419829 Em:AI427504 Em:AI675892 FT Em:AI796358 Em:AI827016 Em:AI910737 Em:AI911761 Em:AI971880 FT Em:AL514551 Em:AL514552 Em:AL521770 Em:AL521771 Em:AL523162 FT Em:AL523163 Em:AL523994 Em:AL526644 Em:AL526673 Em:AL529627 FT Em:AL529628 Em:AL530356 Em:AL536987 Em:AL539617 Em:AL544087 FT Em:AL558979 Em:AL562296 Em:AL563718 Em:AL567954 Em:AL570306 FT Em:AL580690 Em:AV717844 Em:AV736932 Em:AW070888 Em:AW270897 FT Em:AW449443 Em:AW452980 Em:AW661842 Em:AW772395 Em:AW805734 FT Em:AW954431 Em:BB774036 Em:BB778915 Em:BE094254 Em:BE260413 FT Em:BE377295 Em:BE465898 Em:BE669657 Em:BE702313 Em:BE730806 FT Em:BE869187 Em:BF094839 Em:BF317314 Em:BF477355 Em:BF477386 FT Em:BF514670 Em:BF514954 Em:BF515833 Em:BF525040 Em:BF583317 FT Em:BF589949 Em:BF592033 Em:BF785992 Em:BG181828 Em:BG182854 FT Em:BG187050 Em:BG189733 Em:BG191246 Em:BG192794 Em:BG195820 FT Em:BG195821 Em:BG200988 Em:BG206211 Em:BG212473 Em:BG212992 FT Em:BG212993 Em:BG213519 Em:BG214584 Em:BG216750 Em:BG216751 FT Em:BG419816 Em:BG431967 Em:BI413408 Em:BI438562 Em:BI439652 FT Em:BI457125 Em:BI761156 Em:BI764581 Em:BI765877 Em:BI766005 FT Em:BI822164 Em:BI823970 Em:BI826294 Em:BI909293 Em:BI910194 FT Em:F09482 Em:R18207 Em:W68658 Em:W68658.1 Em:W68659 FT Em:W86087.1 Em:W86088 Em:W86873 Em:Z40831" FT /note="match: cDNAs: Em:AF097441 Em:AF097441.1 Em:AF161438 FT Em:AF161438.1 Em:AK013211.1 Em:AK020164.1 Em:BC002147.1 FT Em:BC020239.1 Em:BC021112.1" FT CDS join(AL121978.5:143054..143665,AL590868.10:32640..32799, FT AL590868.10:59139..59270,AL392184.7:9387..9547, FT 5613402..5613553,AL133473.5:43666..43804) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /standard_name="OTTHUMP00000015986" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: proteins: Sw:O16129 Sw:O95363 Sw:P08425 FT Sw:P27001 Sw:P56146 Sw:P75564 Sw:P94984 Sw:Q99M01 Sw:Q9KSN7 FT Sw:Q9PP34 Sw:Q9RRX8 Sw:Q9ZKF9 Tr:O74952 Tr:Q94K73 Tr:Q9M2K2 FT Tr:Q9P465 Tr:Q9P5U0 Tr:Q9U1Z3 Tr:Q9YAY9" FT /protein_id="CAI19950.1" FT /translation="MVGSALRRGAHAYVYLVSKASHISRGHQHQAWGSRPPAAECATQR FT APGSVVELLGKSYPQDDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGR FT FGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDL FT LHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSS FT RSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF FT HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFL FT KQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLI FT DKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF" FT misc_feature 5727959..5785281 FT /note="annotated region of clone" FT misc_feature 5751658 FT /note="Clone_left_end: RP1-182O16" FT polyA_signal 5771792..5771797 FT polyA_site 5771813 FT misc_feature 5785181 FT /note="Clone_right_end: RP1-236A3" FT mRNA join(AL121978.5:143033..143665,AL590868.10:32640..32799, FT AL590868.10:59139..59270,AL392184.7:9387..9547, FT AL022097.1:34584..34735,5771524..5771813) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: cDNAs: Em:AF097441 Em:AF097441.1 Em:AF161438 FT Em:AF161438.1 Em:AK013211.1 Em:AK020164.1 Em:BC002147.1 FT Em:BC020239.1 Em:BC021112.1" FT /note="match: ESTs: Em:AA203629 Em:AA380366 Em:AA486503 FT Em:AA486503.1 Em:AA488691 Em:AA586600 Em:AA724346 FT Em:AA775174 Em:AA856512 Em:AA885284 Em:AA919057 Em:AA931994 FT Em:AA971062 Em:AI338405 Em:AI419829 Em:AI427504 Em:AI675892 FT Em:AI796358 Em:AI827016 Em:AI910737 Em:AI911761 Em:AI971880 FT Em:AL514551 Em:AL514552 Em:AL521770 Em:AL521771 Em:AL523162 FT Em:AL523163 Em:AL523994 Em:AL526644 Em:AL526673 Em:AL529627 FT Em:AL529628 Em:AL530356 Em:AL536987 Em:AL539617 Em:AL544087 FT Em:AL558979 Em:AL562296 Em:AL563718 Em:AL567954 Em:AL570306 FT Em:AL580690 Em:AV717844 Em:AV736932 Em:AW070888 Em:AW270897 FT Em:AW449443 Em:AW452980 Em:AW661842 Em:AW772395 Em:AW805734 FT Em:AW954431 Em:BB774036 Em:BB778915 Em:BE094254 Em:BE260413 FT Em:BE377295 Em:BE465898 Em:BE669657 Em:BE702313 Em:BE730806 FT Em:BE869187 Em:BF094839 Em:BF317314 Em:BF477355 Em:BF477386 FT Em:BF514670 Em:BF514954 Em:BF515833 Em:BF525040 Em:BF583317 FT Em:BF589949 Em:BF592033 Em:BF785992 Em:BG181828 Em:BG182854 FT Em:BG187050 Em:BG189733 Em:BG191246 Em:BG192794 Em:BG195820 FT Em:BG195821 Em:BG200988 Em:BG206211 Em:BG212473 Em:BG212992 FT Em:BG212993 Em:BG213519 Em:BG214584 Em:BG216750 Em:BG216751 FT Em:BG419816 Em:BG431967 Em:BI413408 Em:BI438562 Em:BI439652 FT Em:BI457125 Em:BI761156 Em:BI764581 Em:BI765877 Em:BI766005 FT Em:BI822164 Em:BI823970 Em:BI826294 Em:BI909293 Em:BI910194 FT Em:F09482 Em:R18207 Em:W68658 Em:W68658.1 Em:W68659 FT Em:W86087.1 Em:W86088 Em:W86873 Em:Z40831" FT CDS join(AL121978.5:143054..143665,AL590868.10:32640..32799, FT AL590868.10:59139..59270,AL392184.7:9387..9547, FT AL022097.1:34584..34735,5771524..5771662) FT /gene="FARS2" FT /locus_tag="RP1-236A3.1-001" FT /standard_name="OTTHUMP00000015986" FT /product="phenylalanyl-tRNA synthetase 2, mitochondrial" FT /note="match: proteins: Sw:O16129 Sw:O95363 Sw:P08425 FT Sw:P27001 Sw:P56146 Sw:P75564 Sw:P94984 Sw:Q99M01 Sw:Q9KSN7 FT Sw:Q9PP34 Sw:Q9RRX8 Sw:Q9ZKF9 Tr:O74952 Tr:Q94K73 Tr:Q9M2K2 FT Tr:Q9P465 Tr:Q9P5U0 Tr:Q9U1Z3 Tr:Q9YAY9" FT /protein_id="CAI19901.1" FT /translation="MVGSALRRGAHAYVYLVSKASHISRGHQHQAWGSRPPAAECATQR FT APGSVVELLGKSYPQDDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGR FT FGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDL FT LHAGLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSS FT RSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF FT HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFL FT KQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLI FT DKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF" FT misc_feature 5785282..5855722 FT /note="annotated region of clone" FT CDS complement(5788579..5788932) FT /pseudo FT /locus_tag="RP1-182O16.1-001" FT /product="ribosomal protein L34 pseudogene" FT /note="match: proteins: Sw:O42846 Sw:P11250 Sw:P40525 FT Sw:P40590 Sw:P41098 Sw:P45842 Sw:P49207 Sw:P54053 Sw:P87262 FT Sw:Q29223 Sw:Q42351 Tr:O97690" FT misc_feature 5809423..5809726 FT /note="Region derived from clone PCR. Assembly consistent FT with restriction digest" FT CDS complement(5817654..5818599) FT /pseudo FT /locus_tag="RP1-182O16.2-001" FT /product="Glyceraldehyde 3-phosphate dehydrogenase (GAPDH) FT pseudogene" FT /note="match: proteins: Sw:P00355 Sw:P16858 Sw:Q28554 FT Sw:Q9N2D5 Sw:Q9Y796 Tr:Q90ZF1 Tr:Q99N41 Tr:Q9N9Y3 Tr:Q9PTW5 FT Tr:Q9QWU4" FT mRNA join(5851739..5851895,5852296..5852370, FT AL136307.12:14652..14831) FT /locus_tag="RP3-380B8.4-001" FT /product="Putative novel transcript" FT /note="match: ESTs: Em:AA428638 Em:AA432297 Em:R21759" FT misc_feature 5855523 FT /note="Clone_left_end: RP3-380B8" FT misc_feature 5855723..6042504 FT /note="annotated region of clone" FT mRNA complement(join(<5875164..5875421,5876001..5876103)) FT /locus_tag="RP3-380B8.3-001" FT /product="Putative Novel transcript" FT /note="match: ESTs: Em:R79825.1" FT misc_feature 5912660 FT /note="Clone_right_end: RP1-182O16" FT mRNA join(AL136968.14:66558..66714,AL136968.14:67115..67189, FT 5870274..5870453) FT /locus_tag="RP3-380B8.4-001" FT /product="Putative novel transcript" FT /note="match: ESTs: Em:AA428638 Em:AA432297 Em:R21759" FT CDS 5972645..5974246 FT /pseudo FT /locus_tag="RP3-380B8.1-001" FT /product="Pyruvate kinase (PKM2) pseudogene" FT /note="match: proteins: Sw:P00548 Sw:P11974 Sw:P11974 FT Sw:P11979 Sw:P11980 Sw:P11980 Sw:P14618 Sw:P14618 Sw:P52480 FT Sw:P94685 Sw:Q92122" FT misc_feature 5996825 FT /note="Clone_left_end: RP11-525O21" FT polyA_site complement(5998232) FT polyA_signal complement(5998247..5998252) FT mRNA complement(join(5998948..5999437,6002586..6002730, FT 6003059..6003196)) FT /gene="RP3-380B8.2" FT /locus_tag="RP3-380B8.2-002" FT /product="Neuritin" FT /note="match: ESTs: Em:BI915137" FT mRNA complement(join(5998232..5999437,6002586..6002730, FT 6006928..6007200)) FT /gene="RP3-380B8.2" FT /locus_tag="RP3-380B8.2-001" FT /product="Neuritin" FT /note="match: ESTs: Em:AL528455 Em:AL541038 Em:AL552509 FT Em:BE655104 Em:BE890388 Em:BG900104 Em:BM107198 Em:W26590 FT Em:Z41921" FT /note="match: cDNAs: Em:AF136631.1 Em:AJ420483.1 FT Em:BC002683.1" FT CDS complement(join(5999209..5999437,6002586..6002730, FT 6006928..6006982)) FT /gene="RP3-380B8.2" FT /locus_tag="RP3-380B8.2-001" FT /standard_name="OTTHUMP00000015989" FT /product="Neuritin" FT /note="match: proteins: Tr:O08957" FT /protein_id="CAC00777.1" FT /translation="MGLKLNGRYISLILAVQIAYLVQAVRAAGKCDAVFKGFSDCLLKL FT GDSMANYPQGLDDKTNIKTVCTYWEDFHSCTVTALTDCQEGAKDMWDKLRKESKNLNIQ FT GSLFELCGSGNGAAGSLLPAFPVLLVSLSAALATWLSF" FT misc_feature 6042404 FT /note="Clone_right_end: RP3-380B8" FT misc_feature 6042505..6206364 FT /note="annotated region of clone" FT CDS complement(join(6145852..6146005,6152046..6152182, FT 6167691..6167851,6174813..6175100,6182221..6182374, FT 6196030..6196118,6197456..6197559,AL391420.16:16002..16140, FT AL133326.10:539..713,AL133326.10:24165..24272, FT AL133326.10:26664..26782,AL133326.10:42411..42662, FT AL133326.10:81204..81392,AL133326.10:94388..94517)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-001" FT /standard_name="OTTHUMP00000015990" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: proteins: Sw:O08619 Sw:P00488 Sw:P00488.4 FT Sw:P21981 Sw:P22735 Sw:P22758 Sw:P23606 Sw:P52181 Sw:Q05187 FT Sw:Q99041 Sw:Q9JLF6 Tr:Q90714 Tr:Q91171" FT /protein_id="CAC36886.3" FT /translation="MSETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEF FT LNVTSVHLFKERWDTNKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEY FT VIGRYPQENKGTYIPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVA FT VWTPYGVLRTSRNPETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIK FT TRSWSYGQFEDGILDTCLYVMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWD FT NIYAYGVPPSAWTGSVDILLEYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYF FT SAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDST FT PQENSDGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDA FT THIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRS FT NVDMDFEVENAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDV FT TLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIII FT KVRGTQVVGSDMTVTVEFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEE FT VCRPWVSGHRKLIASMSSDSLRHVYGELDVQIQRRPSM" FT mRNA complement(join(6144318..6146005,6152046..6152182, FT 6167691..6167851,6174813..6175100,6182221..6182374, FT 6196030..6196118,6197456..6197559,AL391420.16:16002..16140, FT AL133326.10:539..713,AL133326.10:24165..24272, FT AL133326.10:26664..26782,AL133326.10:42411..42662, FT AL133326.10:81204..81392,AL133326.10:94388..94535, FT AL133326.10:96440..96687)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-001" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: cDNAs: Em:AJ278103.1 Em:AK004764.1 FT Em:BC011073.1 Em:BC027963.1 Em:M14354.1 Em:M14539.1 FT Em:U50340.1 Em:Y12502.1" FT /note="match: ESTs: Em:AA103034.1 Em:AI317621.1 FT Em:AI357362.1 Em:AI786681.1 Em:AI807854.1 Em:AL037746.1 FT Em:AL542974.1 Em:AL548477 Em:AL573026.1 Em:AL598631 FT Em:AL598631.1 Em:AU120508.1 Em:AU134994.1 Em:AW026260.1 FT Em:AW157396.1 Em:BE767777.1 Em:BE929885.1 Em:BF138122.1 FT Em:BF138862.1 Em:BF725271.1 Em:BF990151.1 Em:BF990156.1 FT Em:BF993639.1 Em:BG012676.1 Em:BG732928.1 Em:BI048482.1 FT Em:BI765332.1 Em:BM691208.1 Em:BM691346.1 Em:BQ553184.1 FT Em:DA856310.1 Em:H77384.1 Em:H77385.1 Em:H83154.1 FT Em:R65984.1 Em:W26167.1" FT polyA_site complement(6144318) FT polyA_signal complement(6144332..6144337) FT misc_feature 6174753 FT /note="Clone_left_end: RP11-232H4" FT misc_feature 6206264 FT /note="Clone_right_end: RP11-525O21" FT misc_feature 6206365..6224480 FT /note="annotated region of clone" FT polyA_site complement(6206645) FT polyA_signal complement(6206658..6206663) FT mRNA complement(join(6206644..6206835,6222266..6222404, FT AL133326.10:539..>661)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-002" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: ESTs: Em:BQ011788.1 Em:BQ011797.1 FT Em:CF528737.1 Em:CF529974.1" FT CDS complement(join(6206790..6206835,6222266..6222404, FT AL133326.10:539..>661)) FT /codon_start=3 FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-002" FT /standard_name="OTTHUMP00000015991" FT /product="coagulation factor XIII, A1 polypeptide" FT /protein_id="CAI39796.1" FT /translation="AYGVPPSAWTGSVDILLEYRSSENPVRYGQCWVFAGVFNTFLRCL FT GIPARIVTNYFSAHDNDANLQMDIFLEEDGNVNSKLTKDSVWYPSIPAAGMSPKSA" FT misc_feature 6224281 FT /note="Clone_left_end: RP3-398D13" FT CDS complement(join(AL157775.15:103448..103601, FT AL157775.15:109642..109778,AL157775.15:125287..125447, FT AL157775.15:132409..132696,AL157775.15:139817..139970, FT AL157775.15:153626..153714,AL157775.15:155052..155155, FT 6222266..6222404,AL133326.10:539..713, FT AL133326.10:24165..24272,AL133326.10:26664..26782, FT AL133326.10:42411..42662,AL133326.10:81204..81392, FT AL133326.10:94388..94517)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-001" FT /standard_name="OTTHUMP00000015990" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: proteins: Sw:O08619 Sw:P00488 Sw:P00488.4 FT Sw:P21981 Sw:P22735 Sw:P22758 Sw:P23606 Sw:P52181 Sw:Q05187 FT Sw:Q99041 Sw:Q9JLF6 Tr:Q90714 Tr:Q91171" FT /protein_id="CAI39797.2" FT /translation="MSETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEF FT LNVTSVHLFKERWDTNKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEY FT VIGRYPQENKGTYIPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVA FT VWTPYGVLRTSRNPETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIK FT TRSWSYGQFEDGILDTCLYVMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWD FT NIYAYGVPPSAWTGSVDILLEYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYF FT SAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDST FT PQENSDGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDA FT THIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRS FT NVDMDFEVENAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDV FT TLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIII FT KVRGTQVVGSDMTVTVEFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEE FT VCRPWVSGHRKLIASMSSDSLRHVYGELDVQIQRRPSM" FT mRNA complement(join(AL157775.15:101914..103601, FT AL157775.15:109642..109778,AL157775.15:125287..125447, FT AL157775.15:132409..132696,AL157775.15:139817..139970, FT AL157775.15:153626..153714,AL157775.15:155052..155155, FT 6222266..6222404,AL133326.10:539..713, FT AL133326.10:24165..24272,AL133326.10:26664..26782, FT AL133326.10:42411..42662,AL133326.10:81204..81392, FT AL133326.10:94388..94535,AL133326.10:96440..96687)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-001" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: cDNAs: Em:AJ278103.1 Em:AK004764.1 FT Em:BC011073.1 Em:BC027963.1 Em:M14354.1 Em:M14539.1 FT Em:U50340.1 Em:Y12502.1" FT /note="match: ESTs: Em:AA103034.1 Em:AI317621.1 FT Em:AI357362.1 Em:AI786681.1 Em:AI807854.1 Em:AL037746.1 FT Em:AL542974.1 Em:AL548477 Em:AL573026.1 Em:AL598631 FT Em:AL598631.1 Em:AU120508.1 Em:AU134994.1 Em:AW026260.1 FT Em:AW157396.1 Em:BE767777.1 Em:BE929885.1 Em:BF138122.1 FT Em:BF138862.1 Em:BF725271.1 Em:BF990151.1 Em:BF990156.1 FT Em:BF993639.1 Em:BG012676.1 Em:BG732928.1 Em:BI048482.1 FT Em:BI765332.1 Em:BM691208.1 Em:BM691346.1 Em:BQ553184.1 FT Em:DA856310.1 Em:H77384.1 Em:H77385.1 Em:H83154.1 FT Em:R65984.1 Em:W26167.1" FT misc_feature 6224481..6371418 FT /note="annotated region of clone" FT mRNA complement(join(AL391420.16:380..571, FT AL391420.16:16002..16140,6224919..>6225041)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-002" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: ESTs: Em:BQ011788.1 Em:BQ011797.1 FT Em:CF528737.1 Em:CF529974.1" FT CDS complement(join(AL391420.16:526..571, FT AL391420.16:16002..16140,6224919..>6225041)) FT /codon_start=3 FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-002" FT /standard_name="OTTHUMP00000015991" FT /product="coagulation factor XIII, A1 polypeptide" FT /protein_id="CAI20420.1" FT /translation="AYGVPPSAWTGSVDILLEYRSSENPVRYGQCWVFAGVFNTFLRCL FT GIPARIVTNYFSAHDNDANLQMDIFLEEDGNVNSKLTKDSVWYPSIPAAGMSPKSA" FT mRNA complement(join(6366365..6366842,6369235..6369388, FT AL162719.18:52787..52943,AL031123.14:49989..50137)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BG703873 Em:BM476525 Em:F12446 FT Em:T74068" FT polyA_site complement(6305346) FT polyA_signal complement(6305362..6305367) FT mRNA complement(join(6251140..6251162,6266791..6267042, FT 6305584..6305887)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-005" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: ESTs: Em:DB229692.1" FT mRNA complement(join(6346698..6347653,6348844..6348983, FT 6366588..6366842,6369235..6369388,AL162719.18:52787..52943, FT AL031123.14:27239..27332,AL031123.14:32362..32433, FT AL031123.14:85576..85688)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BM925994.1" FT /note="match: cDNAs: Em:BC031936.1" FT mRNA complement(join(6360824..6362594,6366588..6366842, FT 6369235..6369388,AL162719.18:52787..52943, FT AL031123.14:27239..27332,AL031123.14:54100..54423, FT AL031123.14:85576..85639)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK091027.1 Em:AX746739.1" FT CDS complement(join(<6266946..6267042,6305584..6305772, FT 6318768..6318897)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-003" FT /standard_name="OTTHUMP00000196998" FT /product="coagulation factor XIII, A1 polypeptide" FT /protein_id="CAB99356.2" FT /translation="MSETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEF FT LNVTSVHLFKERWDTNKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEY FT VIGRYPQENKGTYIPVPIVSELQSGKWGAKIVMR" FT CDS complement(join(AL157775.15:103448..103601, FT AL157775.15:109642..109778,AL157775.15:125287..125447, FT AL157775.15:132409..132696,AL157775.15:139817..139970, FT AL157775.15:153626..153714,AL157775.15:155052..155155, FT AL391420.16:16002..16140,6224919..6225093,6248545..6248652, FT 6251044..6251162,6266791..6267042,6305584..6305772, FT 6318768..6318897)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-001" FT /standard_name="OTTHUMP00000015990" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: proteins: Sw:O08619 Sw:P00488 Sw:P00488.4 FT Sw:P21981 Sw:P22735 Sw:P22758 Sw:P23606 Sw:P52181 Sw:Q05187 FT Sw:Q99041 Sw:Q9JLF6 Tr:Q90714 Tr:Q91171" FT /protein_id="CAO03607.1" FT /translation="MSETSRTAFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEF FT LNVTSVHLFKERWDTNKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEY FT VIGRYPQENKGTYIPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVA FT VWTPYGVLRTSRNPETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIK FT TRSWSYGQFEDGILDTCLYVMDRAQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWD FT NIYAYGVPPSAWTGSVDILLEYRSSENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYF FT SAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDST FT PQENSDGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDA FT THIGKLIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRS FT NVDMDFEVENAVLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDV FT TLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIII FT KVRGTQVVGSDMTVTVEFTNPLKETLRNVWVHLDGPGVTRPMKKMFREIRPNSTVQWEE FT VCRPWVSGHRKLIASMSSDSLRHVYGELDVQIQRRPSM" FT mRNA complement(join(6305346..6305772,6318768..6318915, FT 6320820..>6320875)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-006" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: ESTs: Em:BU730902.1" FT CDS complement(join(6305534..6305772,6318768..6318915, FT 6320820..>6320875)) FT /codon_start=3 FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-006" FT /standard_name="OTTHUMP00000197000" FT /product="coagulation factor XIII, A1 polypeptide" FT /protein_id="CAO03608.1" FT /translation="EAHRASPREGTSGGERLQDLVKSKMSETSRTAFGGRRAVPPNNSN FT AAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTNKVDHHTDKYENNKLIVRRG FT QSFYVQIDFSRPYDPRRDLFRVEYVIGECHVQAPVLTPWVAL" FT mRNA complement(join(AL157775.15:101914..103601, FT AL157775.15:109642..109778,AL157775.15:125287..125447, FT AL157775.15:132409..132696,AL157775.15:139817..139970, FT AL157775.15:153626..153714,AL157775.15:155052..155155, FT AL391420.16:16002..16140,6224919..6225093,6248545..6248652, FT 6251044..6251162,6266791..6267042,6305584..6305772, FT 6318768..6318915,6320820..6321067)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-001" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: cDNAs: Em:AJ278103.1 Em:AK004764.1 FT Em:BC011073.1 Em:BC027963.1 Em:M14354.1 Em:M14539.1 FT Em:U50340.1 Em:Y12502.1" FT /note="match: ESTs: Em:AA103034.1 Em:AI317621.1 FT Em:AI357362.1 Em:AI786681.1 Em:AI807854.1 Em:AL037746.1 FT Em:AL542974.1 Em:AL548477 Em:AL573026.1 Em:AL598631 FT Em:AL598631.1 Em:AU120508.1 Em:AU134994.1 Em:AW026260.1 FT Em:AW157396.1 Em:BE767777.1 Em:BE929885.1 Em:BF138122.1 FT Em:BF138862.1 Em:BF725271.1 Em:BF990151.1 Em:BF990156.1 FT Em:BF993639.1 Em:BG012676.1 Em:BG732928.1 Em:BI048482.1 FT Em:BI765332.1 Em:BM691208.1 Em:BM691346.1 Em:BQ553184.1 FT Em:DA856310.1 Em:H77384.1 Em:H77385.1 Em:H83154.1 FT Em:R65984.1 Em:W26167.1" FT mRNA complement(join(<6266967..6267042,6305584..6305772, FT 6318768..6318915,6321033..6321138)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-004" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: ESTs: Em:DA851613.1" FT CDS complement(join(<6266967..6267042,6305584..6305772, FT 6318768..6318915,6321033..6321128)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-004" FT /standard_name="OTTHUMP00000196999" FT /product="coagulation factor XIII, A1 polypeptide" FT /protein_id="CAO03609.1" FT /translation="MGMGRRSGNGKLGVRGASGREGRTCRDNRPDEDLVKSKMSETSRT FT AFGGRRAVPPNNSNAAEDDLPTVELQGVVPRGVNLQEFLNVTSVHLFKERWDTNKVDHH FT TDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVIGRYPQENKGTYIPVPIVSE FT LQSGKWG" FT mRNA complement(join(<6266946..6267042,6305584..6305772, FT 6318768..6318915,6320820..6320892,6321172..6321246)) FT /gene="F13A1" FT /locus_tag="RP11-232H4.1-003" FT /product="coagulation factor XIII, A1 polypeptide" FT /note="match: ESTs: Em:DA862033.1 Em:DB223134.1" FT polyA_site complement(6346698) FT polyA_signal complement(6346715..6346720) FT CDS complement(6347314..6347614) FT /pseudo FT /locus_tag="RP3-398D13.2-001" FT /product="small nuclear RNA activating complex, polypeptide FT 5, 19kDa (SNAPC5) pseudogene" FT /note="match: proteins: Sw:O75971.1 Sw:Q29S17.1 Sw:Q8R2K7.1 FT Tr:Q25P05.1" FT misc_feature 6371318 FT /note="Clone_right_end: RP3-398D13" FT misc_feature 6371419..6386122 FT /note="annotated region of clone" FT misc_feature 6385923 FT /note="Clone_left_end: RP11-461D23" FT misc_feature 6386123..6477241 FT /note="annotated region of clone" FT misc_feature 6401324..6401372 FT /note="Sequence from overlapping clone bA85E24 (AL512305). FT Assembly confirmed by restriction digest" FT misc_feature 6411237..6411247 FT /note="Sequence from overlapping clone bA85E24 (AL512305). FT Assembly confirmed by restriction digest" FT misc_feature 6414001 FT /note="Clone_left_end: RP11-385K13" FT misc_feature 6419949 FT /note="Clone_right_end: RP11-85E24" FT misc_feature 6430198..6430255 FT /note="Sequence from overlapping clone bA385K13 (AL355363). FT Assembly confirmed by restriction digest" FT mRNA complement(join(AL133326.10:141985..142462, FT AL133326.10:144855..145008,6438809..6438965, FT AL031123.14:49989..50137)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BG703873 Em:BM476525 Em:F12446 FT Em:T74068" FT misc_feature 6442179..6442571 FT /note="Sequence from overlapping clone bA385D23 (AL355363). FT Assembly confirmed by restriction digest" FT mRNA complement(join(AL133326.10:122318..123273, FT AL133326.10:124464..124603,AL133326.10:142208..142462, FT AL133326.10:144855..145008,6438809..6438965, FT AL031123.14:27239..27332,AL031123.14:32362..32433, FT AL031123.14:85576..85688)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC031936.1" FT /note="match: ESTs: Em:BM925994.1" FT mRNA complement(join(AL133326.10:136444..138214, FT AL133326.10:142208..142462,AL133326.10:144855..145008, FT 6438809..6438965,AL031123.14:27239..27332, FT AL031123.14:54100..54423,AL031123.14:85576..85639)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK091027.1 Em:AX746739.1" FT misc_feature 6477042 FT /note="Clone_left_end: RP1-23O21" FT misc_feature 6477242..6537389 FT /note="annotated region of clone" FT CDS 6534930..6535864 FT /pseudo FT /locus_tag="RP1-23O21.1-001" FT /product="acidic calponin 3 (CNN3) pseudogene" FT /note="match: proteins: Sw:P37397 Sw:Q15417" FT misc_feature 6537190 FT /note="Clone_left_end: RP1-80N2" FT misc_feature 6537390..6731020 FT /note="annotated region of clone" FT mRNA complement(join(AL133326.10:141985..142462, FT AL133326.10:144855..145008,AL162719.18:52787..52943, FT 6587278..6587426)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BG703873 Em:BM476525 Em:F12446 FT Em:T74068" FT mRNA join(6588341..6588683,6588948..6589103,6625159..6625245, FT 6626526..6626654,6649858..6649910,6654777..6655216) FT /gene="LY86" FT /locus_tag="RP1-80N2.1-001" FT /product="lymphocyte antigen 86" FT /note="match: ESTs: Em:AA340310 Em:AA688405 Em:AA732331 FT Em:AA769363 Em:AA804669 Em:AA805780 Em:AA874924.1 FT Em:AI720863.1 Em:AV763053 Em:AW263169.1 Em:AW276030.1 FT Em:C02431 Em:T84854 Em:T91708 Em:T92475" FT /note="match: cDNAs: Em:AB007599 Em:AB020499 Em:AF057178" FT CDS join(6588968..6589103,6625159..6625245,6626526..6626654, FT 6649858..6649910,6654777..6654860) FT /gene="LY86" FT /locus_tag="RP1-80N2.1-001" FT /standard_name="OTTHUMP00000015993" FT /product="lymphocyte antigen 86" FT /note="match: proteins: Sw:O88188 Sw:O95711 Sw:Q90890" FT /protein_id="CAB76262.1" FT /translation="MKGFTATLFLWTLIFPSCSGGGGGKAWPTHVVCSDSGLEVLYQSC FT DPLQDFGFSVEKCSKQLKSNINIRFGIILREDIKELFLDLALMSQGSSVLNFSYPICEA FT ALPKFSFCGRRKGEQIYYAGPVNNPEFTIPQGEYQVLLELYTEKRSTVACANATIMCS" FT mRNA complement(join(AL133326.10:122318..123273, FT AL133326.10:124464..124603,AL133326.10:142208..142462, FT AL133326.10:144855..145008,AL162719.18:52787..52943, FT 6564528..6564621,6569651..6569722,6622865..6622977)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BM925994.1" FT /note="match: cDNAs: Em:BC031936.1" FT mRNA complement(join(AL133326.10:136444..138214, FT AL133326.10:142208..142462,AL133326.10:144855..145008, FT AL162719.18:52787..52943,6564528..6564621,6591389..6591712, FT 6622865..6622928)) FT /gene="RP3-398D13.3" FT /locus_tag="RP3-398D13.3-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK091027.1 Em:AX746739.1" FT polyA_signal 6655195..6655200 FT polyA_site 6655215 FT polyA_site 6655216 FT mRNA join(6692977..6693414,6711106..6711300,6713944..6714208) FT /locus_tag="RP1-80N2.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA676819 Em:AA677954 Em:AI580362.1 FT Em:AI628458.1 Em:AI831913.1 Em:AW300122.1" FT misc_feature 6730920 FT /note="Clone_right_end: RP1-80N2" FT misc_feature 6731021..6760438 FT /note="annotated region of clone" FT polyA_site complement(6758510) FT polyA_signal complement(6758530..6758535) FT mRNA complement(join(6758511..6758561,6759188..6759524)) FT /locus_tag="RP3-470L22.1-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:BI562597" FT misc_feature 6760338 FT /note="Clone_right_end: RP3-470L22" FT misc_feature 6760439..6825148 FT /note="annotated region of clone" FT CDS complement(6795081..>6795635) FT /pseudo FT /locus_tag="RP11-320C15.1-001" FT /product="basic transcription factor 3 (BTF3) pseudogene" FT /note="match: proteins: Sw:P20290 Sw:Q13890 Sw:Q13892 FT Sw:Q18885 Sw:Q64152 Sw:Q92371 Tr:O24121 Tr:O65073 Tr:Q9SMW7 FT Tr:Q9VPR2" FT misc_feature 6822057 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 500bp from restriction digest data" FT misc_feature 6822289..6822300 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 6824949 FT /note="Clone_left_end: RP3-429O6" FT misc_feature 6825149..6945577 FT /note="annotated region of clone" FT misc_feature 6860821 FT /note="Clone_right_end: RP11-320C15" FT mRNA join(6901255..6901981,6918743..6918948) FT /locus_tag="RP3-429O6.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG696699" FT misc_feature 6927859 FT /note="Clone_left_end: RP11-556O15" FT misc_feature 6945477 FT /note="Clone_right_end: RP3-429O6" FT misc_feature 6945578..7048058 FT /note="annotated region of clone" FT mRNA join(6993424..6993605,6995283..6995386,6995557..6995787) FT /locus_tag="RP11-556O15.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL705470" FT misc_feature 7048059..7217574 FT /note="annotated region of clone" FT mRNA join(7107830..7108001,7176888..7177006,7181357..7181479, FT 7182103..7182315,7187667..7187756,7189392..7189555, FT 7211037..7211181,7211806..7211942,AL589644.6:9226..9415, FT AL589644.6:11756..14666,AL139095.15:1103..1267, FT AL139095.15:7089..7886,AL139095.15:9176..12645) FT /gene="RREB1" FT /locus_tag="RP11-69L16.1-001" FT /product="ras responsive element binding protein 1" FT /note="match: ESTs: Em:AI088091 Em:AI924329 Em:AL048894 FT Em:AW361320 Em:AW505017 Em:AW505424 Em:BB338539 Em:BB343076 FT Em:BE646450 Em:BE675629 Em:BE840248 Em:BF115369 Em:BF766480 FT Em:BF823521 Em:BG975815 Em:BI029111 Em:BI657551 Em:BI666043 FT Em:BI818966 Em:BI826215 Em:BI909374 Em:T19462 Em:W16208" FT /note="match: cDNAs: Em:AF013754.1 Em:AF072825.1 FT Em:D49835.1 Em:U26914.1" FT misc_feature 7111582 FT /note="Clone_right_end: RP11-556O15" FT CDS join(7182202..7182315,7187667..7187756,7189392..7189555, FT 7211037..7211181,7211806..7211942,AL589644.6:9226..9415, FT AL589644.6:11756..14666,AL139095.15:1103..1267, FT AL139095.15:7089..7886,AL139095.15:9176..9633) FT /gene="RREB1" FT /locus_tag="RP11-69L16.1-001" FT /standard_name="OTTHUMP00000015997" FT /product="ras responsive element binding protein 1" FT /note="match: proteins: Sw:Q92766 Sw:Q92766 Tr:Q9Y474" FT /protein_id="CAH73521.1" FT /translation="MMSAVMSVGKVTENGGSPQGIKSPSKPPGPNRIGRRNQETKEEKS FT SYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSGER FT PYKCTVCGQSFTTNGNMHRHMKIHEKDPNSATATAPPSPLKRRRLSSKRKLSHDAESER FT EDPAPAKKMVEDGQSGDLEKKADEVFHCPVCFKEFVCKYGLETHMETHSDNPLRCDICC FT VTFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQA FT WCETNLRRCISEQHRFVCDTCDKAFPMLCSLALHKQTHVAADQGQEKPQATPLPGDALD FT QKGFLALLGLQHTKDVRPAPAEEPLPDDNQAIQLQTLKCQLPQDPGCTNLLSLSPFEAA FT SLGGSLTVLPATKDSIKHLSLQPFQKGFIIQPDSSIVVKPISGESAIELADIQQILKMA FT ASAPPQISLPPFSKAPAAPLQAIFKHMPPLKPKPLVTPRTVVATSTPPPLINAQQASPG FT CISPSLPPPPLKLLKGSVEAASNAHLLQSKSGTQPHAATRLSLQQPRAELPGQPEMKTQ FT LEQDSIIEALLPLSMEAKIKQEITEGELKAFMTAPGGKKTPAMRKVLYPCRFCNQVFAF FT SGVLRAHVRSHLGISPYQCNICDYIAADKAALIRHLRTHSGERPYICKICHYPFTVKAN FT CERHLRKKHLKATRKDIEKNIEYVSSSAAELVDAFCAPDTVCRLCGEDLKHYRALRIHM FT RTHCGRGLGGGHKGRKPFECKECSAAFAAKRNCIHHILKQHLHVPEQDIESYVLAADGL FT GPAEAPAAEASGRGEDSGCAALGDCKPLTAFLEPQNGFLHRGPTQPPPPHVSIKLEPAS FT SFAVDFNEPLDFSQKGLALVQVKQENISFLSPSSLVPYDCSMEPIDLSIPKNFRKGDKD FT LATPSEAKKPEEEAGSSEQPSPCPAPGPSLPVTLGPSGILESPMAPAPAATPEPPAQPL FT QGPVQLAVPIYSSALVSSPPLVGSSALLSGTALLRPLRPKPPLLLPKPPVTEELPPLAS FT IAQIISSVSSAPTLLKTKVADPGPASTGSNTTASDSLGGSVPKAATTATPAATTSPKES FT SEPPAPASSPEAASPTEQGPAGTSKKRGRKRGMRSRPRANSGGVDLDSSGEFASIEKML FT ATTDTNKFSPFLQTAEDNTQDEVAGAPADHHGPSDEEQGSPPEDKLLRAKRNSYTNCLQ FT KITCPHCPRVFPWASSLQRHMLTHTGQKPFPCQKCDAFFSTKSNCERHQLRKHGVTTCS FT LRRNGLIPQSKESDVGSHDSTDSQSDAETAAAAGEVLDLTSRDREQPSEGATELRQVAG FT DAPVEQATAETASPVHREEHGRGESHEPEEEHGTEESTGDADGAEEDASSNQSLDLDFA FT TKLMDFKLAEGDGEAGAGGAASQEQKLACDTCGKSFKFLGTLSRHRKAHGRQEPKDEKG FT DGASTAEEGPQPAPEQEEKPPETPAEVVESAPGAGEAPAEKLAEETEGPSDGESAAEKR FT SSEKSDDDKKPKTDSPKSVASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQ FT TCERTFTLKHSLVRHQRIHQKARHAKHHGKDSDKEERGEEDSENESTHSGNNAVSENEA FT ELAPNASNHMAVTRSRKEGLASATKDCSHREEKVTAGWPSEPGQGDLNPESPAALGQDL FT LEPRSKRPAHPILATADGASQLVGME" FT mRNA join(7183316..7184217,7184747..7185520) FT /locus_tag="RP11-405O10.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AU121340" FT /note="match: cDNAs: Em:AK022160.1" FT misc_feature 7217474 FT /note="Clone_right_end: RP11-405O10" FT misc_feature 7217575..7239668 FT /note="annotated region of clone" FT mRNA 7220745..7223026 FT /locus_tag="RP11-489K8.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK022442" FT misc_feature 7239469 FT /note="Clone_left_end: RP11-69L16" FT mRNA join(AL355336.15:59872..60043,AL355336.15:128930..129048, FT AL355336.15:133399..133521,AL355336.15:134145..134357, FT AL355336.15:139709..139798,AL355336.15:141434..141597, FT AL355336.15:163079..163223,AL355336.15:163848..163984, FT 7226700..7226889,7229230..7232140,AL139095.15:1103..1267, FT AL139095.15:7089..7886,AL139095.15:9176..12645) FT /gene="RREB1" FT /locus_tag="RP11-69L16.1-001" FT /product="ras responsive element binding protein 1" FT /note="match: ESTs: Em:AI088091 Em:AI924329 Em:AL048894 FT Em:AW361320 Em:AW505017 Em:AW505424 Em:BB338539 Em:BB343076 FT Em:BE646450 Em:BE675629 Em:BE840248 Em:BF115369 Em:BF766480 FT Em:BF823521 Em:BG975815 Em:BI029111 Em:BI657551 Em:BI666043 FT Em:BI818966 Em:BI826215 Em:BI909374 Em:T19462 Em:W16208" FT /note="match: cDNAs: Em:AF013754.1 Em:AF072825.1 FT Em:D49835.1 Em:U26914.1" FT CDS join(AL355336.15:134244..134357,AL355336.15:139709..139798, FT AL355336.15:141434..141597,AL355336.15:163079..163223, FT AL355336.15:163848..163984,7226700..7226889, FT 7229230..7232140,AL139095.15:1103..1267, FT AL139095.15:7089..7886,AL139095.15:9176..9633) FT /gene="RREB1" FT /locus_tag="RP11-69L16.1-001" FT /standard_name="OTTHUMP00000015997" FT /product="ras responsive element binding protein 1" FT /note="match: proteins: Sw:Q92766 Sw:Q92766 Tr:Q9Y474" FT /protein_id="CAI14574.1" FT /translation="MMSAVMSVGKVTENGGSPQGIKSPSKPPGPNRIGRRNQETKEEKS FT SYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSGER FT PYKCTVCGQSFTTNGNMHRHMKIHEKDPNSATATAPPSPLKRRRLSSKRKLSHDAESER FT EDPAPAKKMVEDGQSGDLEKKADEVFHCPVCFKEFVCKYGLETHMETHSDNPLRCDICC FT VTFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQA FT WCETNLRRCISEQHRFVCDTCDKAFPMLCSLALHKQTHVAADQGQEKPQATPLPGDALD FT QKGFLALLGLQHTKDVRPAPAEEPLPDDNQAIQLQTLKCQLPQDPGCTNLLSLSPFEAA FT SLGGSLTVLPATKDSIKHLSLQPFQKGFIIQPDSSIVVKPISGESAIELADIQQILKMA FT ASAPPQISLPPFSKAPAAPLQAIFKHMPPLKPKPLVTPRTVVATSTPPPLINAQQASPG FT CISPSLPPPPLKLLKGSVEAASNAHLLQSKSGTQPHAATRLSLQQPRAELPGQPEMKTQ FT LEQDSIIEALLPLSMEAKIKQEITEGELKAFMTAPGGKKTPAMRKVLYPCRFCNQVFAF FT SGVLRAHVRSHLGISPYQCNICDYIAADKAALIRHLRTHSGERPYICKICHYPFTVKAN FT CERHLRKKHLKATRKDIEKNIEYVSSSAAELVDAFCAPDTVCRLCGEDLKHYRALRIHM FT RTHCGRGLGGGHKGRKPFECKECSAAFAAKRNCIHHILKQHLHVPEQDIESYVLAADGL FT GPAEAPAAEASGRGEDSGCAALGDCKPLTAFLEPQNGFLHRGPTQPPPPHVSIKLEPAS FT SFAVDFNEPLDFSQKGLALVQVKQENISFLSPSSLVPYDCSMEPIDLSIPKNFRKGDKD FT LATPSEAKKPEEEAGSSEQPSPCPAPGPSLPVTLGPSGILESPMAPAPAATPEPPAQPL FT QGPVQLAVPIYSSALVSSPPLVGSSALLSGTALLRPLRPKPPLLLPKPPVTEELPPLAS FT IAQIISSVSSAPTLLKTKVADPGPASTGSNTTASDSLGGSVPKAATTATPAATTSPKES FT SEPPAPASSPEAASPTEQGPAGTSKKRGRKRGMRSRPRANSGGVDLDSSGEFASIEKML FT ATTDTNKFSPFLQTAEDNTQDEVAGAPADHHGPSDEEQGSPPEDKLLRAKRNSYTNCLQ FT KITCPHCPRVFPWASSLQRHMLTHTGQKPFPCQKCDAFFSTKSNCERHQLRKHGVTTCS FT LRRNGLIPQSKESDVGSHDSTDSQSDAETAAAAGEVLDLTSRDREQPSEGATELRQVAG FT DAPVEQATAETASPVHREEHGRGESHEPEEEHGTEESTGDADGAEEDASSNQSLDLDFA FT TKLMDFKLAEGDGEAGAGGAASQEQKLACDTCGKSFKFLGTLSRHRKAHGRQEPKDEKG FT DGASTAEEGPQPAPEQEEKPPETPAEVVESAPGAGEAPAEKLAEETEGPSDGESAAEKR FT SSEKSDDDKKPKTDSPKSVASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQ FT TCERTFTLKHSLVRHQRIHQKARHAKHHGKDSDKEERGEEDSENESTHSGNNAVSENEA FT ELAPNASNHMAVTRSRKEGLASATKDCSHREEKVTAGWPSEPGQGDLNPESPAALGQDL FT LEPRSKRPAHPILATADGASQLVGME" FT misc_feature 7239669..7406774 FT /note="annotated region of clone" FT polyA_signal 7252187..7252192 FT polyA_site 7252213 FT mRNA join(7276264..7276401,7286056..7286129,7298818..>7299105) FT /locus_tag="RP11-69L16.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG221236" FT mRNA join(AL355336.15:59872..60043,AL355336.15:128930..129048, FT AL355336.15:133399..133521,AL355336.15:134145..134357, FT AL355336.15:139709..139798,AL355336.15:141434..141597, FT AL355336.15:163079..163223,AL355336.15:163848..163984, FT AL589644.6:9226..9415,AL589644.6:11756..14666, FT 7240671..7240835,7246657..7247454,7248744..7252213) FT /gene="RREB1" FT /locus_tag="RP11-69L16.1-001" FT /product="ras responsive element binding protein 1" FT /note="match: ESTs: Em:AI088091 Em:AI924329 Em:AL048894 FT Em:AW361320 Em:AW505017 Em:AW505424 Em:BB338539 Em:BB343076 FT Em:BE646450 Em:BE675629 Em:BE840248 Em:BF115369 Em:BF766480 FT Em:BF823521 Em:BG975815 Em:BI029111 Em:BI657551 Em:BI666043 FT Em:BI818966 Em:BI826215 Em:BI909374 Em:T19462 Em:W16208" FT /note="match: cDNAs: Em:AF013754.1 Em:AF072825.1 FT Em:D49835.1 Em:U26914.1" FT mRNA complement(join(7287804..7290164,7295625..7295718, FT 7298156..7298234,7298980..7299056,7301543..7301805, FT 7303783..7303866,7310146..7310262,7313275..7313435)) FT /gene="SSR1" FT /locus_tag="RP11-69L16.2-001" FT /product="signal sequence receptor, alpha FT (translocon-associated protein alpha)" FT /note="match: cDNAs: Em:AF156965.1 Em:BC007710.2" FT CDS complement(join(7290097..7290164,7295625..7295718, FT 7298156..7298234,7298980..7299056,7301543..7301805, FT 7303783..7303866,7310146..7310262,7313275..7313353)) FT /gene="SSR1" FT /locus_tag="RP11-69L16.2-001" FT /standard_name="OTTHUMP00000015998" FT /product="signal sequence receptor, alpha FT (translocon-associated protein alpha)" FT /note="match: proteins: Sw:P16967.1 Sw:P43307.3 Sw:P53815.1 FT Sw:Q9CY50.1 Tr:Q3TV94.1" FT /protein_id="CAI16444.1" FT /translation="MRLLPRLLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDS FT IIEDEDDEAEVEEDEPTDLVKDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFL FT VGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEP FT MGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVI FT VGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRS FT VGSDE" FT polyA_signal complement(7326892..7326897) FT CDS complement(7331519..>7331909) FT /pseudo FT /locus_tag="RP11-69L16.3-001" FT /product="ATP synthase, H+ transporting, mitochondrial F0 FT complex, subunit c (subunit 9) pseudogene 1" FT /note="match: proteins: Tr:Q29570 Tr:Q71S46" FT CDS complement(7339072..>7339801) FT /pseudo FT /locus_tag="RP11-69L16.5-001" FT /product="ribosomal protein S3 (RPS3) pseudogene" FT /note="match: proteins: Sw:P23396 Sw:P62908 Sw:P79891 FT Tr:Q5YLW3 Tr:Q94LL1 Tr:Q98S35 Tr:Q9CZP6 Tr:Q9D0A2 Tr:Q9SIP7 FT Tr:Q9U411 Tr:Q9WUG0" FT CDS complement(7341087..7342289) FT /pseudo FT /locus_tag="RP11-69L16.6-001" FT /product="1-aminocyclopropane-1-carboxylate synthase FT pseudogene" FT /note="match: proteins: Sw:P37821 Tr:Q07223 Tr:Q8WUL4 FT Tr:Q96QU6 Tr:Q9SXN2 Tr:Q9W698" FT misc_feature 7366469 FT /note="Clone_left_end: RP11-288G3" FT mRNA complement(join(7326884..7327132,7330082..7330121, FT 7334255..7334323,7355274..7355344,7356258..7356362, FT 7365701..7365808,7366037..7366117,7368987..7369031, FT 7370152..7370298,7373306..>7374235)) FT /gene="CAGE1" FT /locus_tag="RP11-69L16.7-002" FT /product="cancer antigen 1" FT /note="match: cDNAs: Em:AB070045" FT CDS complement(join(7327091..7327132,7330082..7330121, FT 7334255..7334323,7355274..7355344,7356258..7356362, FT 7365701..7365808,7366037..7366117,7368987..7369031, FT 7370152..7370298,7373306..>7374235)) FT /codon_start=1 FT /gene="CAGE1" FT /locus_tag="RP11-69L16.7-002" FT /standard_name="OTTHUMP00000015996" FT /product="cancer antigen 1" FT /protein_id="CAI16449.1" FT /translation="ISWRSEACRENCEMPDWEQSAESLQPVQEDMALNEVLQKLKHTNR FT KQEVRIQELQCSNLYLEKRVKELQMKITKQQVFIDVINKLKENVEELIEDKYKIILEKN FT DTKKTLQNLEEVLANTQKHLQESRNDKEMLQLQFKKIKANYVCLQERYMTEMQQKNKSV FT SQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEFLSLQEEFQKL FT EKENLEERQKLKSRLEKLLTQVRNLQFMSENERTKNIKLQQQINEVKNENAKLKQQVAR FT SEEQNYVPKFETAQLKDQLEEVLKSDITKDTKTTHSNLLPDCSPCEERLNPADIKRASQ FT LASKMHSLLALMVGLLTCQDIINSDAEHFKESEKLLKHKDRITTFRELIAKEKAFQDHA FT IKVIDCDSDEAKSIRDVPTLLGAKLDKYHSLNEELDFLITKLGHLLESKENHCNRLIEE FT NDKYQRHLGNLIKKVTSYEEIIECADQRLAISHSQIAHLEERNKHLEDLIRKPREKARK FT PRSKSLENHPKSMTMMPALFKENRNDLD" FT CDS join(AL355336.15:134244..134357,AL355336.15:139709..139798, FT AL355336.15:141434..141597,AL355336.15:163079..163223, FT AL355336.15:163848..163984,AL589644.6:9226..9415, FT AL589644.6:11756..14666,7240671..7240835,7246657..7247454, FT 7248744..7249201) FT /gene="RREB1" FT /locus_tag="RP11-69L16.1-001" FT /standard_name="OTTHUMP00000015997" FT /product="ras responsive element binding protein 1" FT /note="match: proteins: Sw:Q92766 Sw:Q92766 Tr:Q9Y474" FT /protein_id="CAI16450.1" FT /translation="MMSAVMSVGKVTENGGSPQGIKSPSKPPGPNRIGRRNQETKEEKS FT SYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHSCSICGKSLSSASSLDRHMLVHSGER FT PYKCTVCGQSFTTNGNMHRHMKIHEKDPNSATATAPPSPLKRRRLSSKRKLSHDAESER FT EDPAPAKKMVEDGQSGDLEKKADEVFHCPVCFKEFVCKYGLETHMETHSDNPLRCDICC FT VTFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQA FT WCETNLRRCISEQHRFVCDTCDKAFPMLCSLALHKQTHVAADQGQEKPQATPLPGDALD FT QKGFLALLGLQHTKDVRPAPAEEPLPDDNQAIQLQTLKCQLPQDPGCTNLLSLSPFEAA FT SLGGSLTVLPATKDSIKHLSLQPFQKGFIIQPDSSIVVKPISGESAIELADIQQILKMA FT ASAPPQISLPPFSKAPAAPLQAIFKHMPPLKPKPLVTPRTVVATSTPPPLINAQQASPG FT CISPSLPPPPLKLLKGSVEAASNAHLLQSKSGTQPHAATRLSLQQPRAELPGQPEMKTQ FT LEQDSIIEALLPLSMEAKIKQEITEGELKAFMTAPGGKKTPAMRKVLYPCRFCNQVFAF FT SGVLRAHVRSHLGISPYQCNICDYIAADKAALIRHLRTHSGERPYICKICHYPFTVKAN FT CERHLRKKHLKATRKDIEKNIEYVSSSAAELVDAFCAPDTVCRLCGEDLKHYRALRIHM FT RTHCGRGLGGGHKGRKPFECKECSAAFAAKRNCIHHILKQHLHVPEQDIESYVLAADGL FT GPAEAPAAEASGRGEDSGCAALGDCKPLTAFLEPQNGFLHRGPTQPPPPHVSIKLEPAS FT SFAVDFNEPLDFSQKGLALVQVKQENISFLSPSSLVPYDCSMEPIDLSIPKNFRKGDKD FT LATPSEAKKPEEEAGSSEQPSPCPAPGPSLPVTLGPSGILESPMAPAPAATPEPPAQPL FT QGPVQLAVPIYSSALVSSPPLVGSSALLSGTALLRPLRPKPPLLLPKPPVTEELPPLAS FT IAQIISSVSSAPTLLKTKVADPGPASTGSNTTASDSLGGSVPKAATTATPAATTSPKES FT SEPPAPASSPEAASPTEQGPAGTSKKRGRKRGMRSRPRANSGGVDLDSSGEFASIEKML FT ATTDTNKFSPFLQTAEDNTQDEVAGAPADHHGPSDEEQGSPPEDKLLRAKRNSYTNCLQ FT KITCPHCPRVFPWASSLQRHMLTHTGQKPFPCQKCDAFFSTKSNCERHQLRKHGVTTCS FT LRRNGLIPQSKESDVGSHDSTDSQSDAETAAAAGEVLDLTSRDREQPSEGATELRQVAG FT DAPVEQATAETASPVHREEHGRGESHEPEEEHGTEESTGDADGAEEDASSNQSLDLDFA FT TKLMDFKLAEGDGEAGAGGAASQEQKLACDTCGKSFKFLGTLSRHRKAHGRQEPKDEKG FT DGASTAEEGPQPAPEQEEKPPETPAEVVESAPGAGEAPAEKLAEETEGPSDGESAAEKR FT SSEKSDDDKKPKTDSPKSVASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQ FT TCERTFTLKHSLVRHQRIHQKARHAKHHGKDSDKEERGEEDSENESTHSGNNAVSENEA FT ELAPNASNHMAVTRSRKEGLASATKDCSHREEKVTAGWPSEPGQGDLNPESPAALGQDL FT LEPRSKRPAHPILATADGASQLVGME" FT CDS complement(join(7327091..7327132,7330082..7330121, FT 7334255..7334323,7355274..7355344,7356258..7356362, FT 7365701..7365808,7366037..7366117,7368987..7369031, FT 7370152..7370298,7373306..7374364,7378760..7379253, FT 7386018..7386105,7387212..7387406)) FT /gene="CAGE1" FT /locus_tag="RP11-69L16.7-001" FT /standard_name="OTTHUMP00000015995" FT /product="cancer antigen 1" FT /note="match: proteins: Tr:Q95JR0 Tr:Q95JY2" FT /protein_id="CAI16451.1" FT /translation="MNKDYQKFWSSPSDPVHFEVDTSHEKVESMSESDTMNVSNLSQGV FT MLSHSPICMETTGTTCDLPQNEIKNFERENEYESTLCEDAYGTLDNLLNDNNIENYSTN FT ALIQPVDTISISSLRQFETVCKFHWVEAFDDEMTEKPEFQSQVYNYAKDNNIKQDSFKE FT ENPMETSVSANTDQLGNEYFRQPPPRSPPLIHCSGEMLKFTEKSLAKSIAKESALNPSQ FT PPSFLCKESVHNNIVKPFDKENSSNLVHLRVNYKAEETAVPSKEIQNYGEIPEMSVSYE FT KEVTAEGVERPEIVSTWSSAGISWRSEACRENCEMPDWEQSAESLQPVQEDMALNEVLQ FT KLKHTNRKQEVRIQELQCSNLYLEKRVKELQMKITKQQVFIDVINKLKENVEELIEDKY FT KIILEKNDTKKTLQNLEEVLANTQKHLQESRNDKEMLQLQFKKIKANYVCLQERYMTEM FT QQKNKSVSQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEFLSL FT QEEFQKLEKENLEERQKLKSRLEKLLTQVRNLQFMSENERTKNIKLQQQINEVKNENAK FT LKQQVARSEEQNYVPKFETAQLKDQLEEVLKSDITKDTKTTHSNLLPDCSPCEERLNPA FT DIKRASQLASKMHSLLALMVGLLTCQDIINSDAEHFKESEKLLKHKDRITTFRELIAKE FT KAFQDHAIKVIDCDSDEAKSIRDVPTLLGAKLDKYHSLNEELDFLITKLGHLLESKENH FT CNRLIEENDKYQRHLGNLIKKVTSYEEIIECADQRLAISHSQIAHLEERNKHLEDLIRK FT PREKARKPRSKSLENHPKSMTMMPALFKENRNDLD" FT mRNA complement(join(7326884..7327132,7330082..7330121, FT 7334255..7334323,7355274..7355344,7356258..7356362, FT 7365701..7365808,7366037..7366117,7368987..7369031, FT 7370152..7370298,7373306..7374364,7378760..7379253, FT 7386018..7386105,7387212..7387429,7389435..7389635)) FT /gene="CAGE1" FT /locus_tag="RP11-69L16.7-001" FT /product="cancer antigen 1" FT /note="match: ESTs: Em:AW080487 Em:BG721353 Em:BI462616 FT Em:BI559755 Em:BI560723" FT /note="match: cDNAs: Em:AB070119 Em:BC026188 Em:BC026194" FT mRNA join(7390062..7390306,7393332..7393536,7395286..7395376, FT 7396936..7397005,7398931..7398973,7401191..7401283, FT 7402836..7402948,7403050..7403130,7404174..7404260, FT 7404651..7404788,7405151..7405254,7405482..7405588, FT AL138878.10:3945..4010,AL138878.10:4891..5010, FT AL138878.10:6448..6501,AL138878.10:7797..7949, FT AL138878.10:10890..11596) FT /gene="RIOK1" FT /locus_tag="RP11-288G3.1-001" FT /product="RIO kinase 1 (yeast)" FT /note="match: ESTs: Em:AA007617 Em:AA085379 Em:AA127539 FT Em:AA702832 Em:AA778768 Em:AA856137 Em:AI118179 Em:AI465698 FT Em:AI686567 Em:AL528030 Em:AL550825 Em:AL556930 Em:AW073551 FT Em:AW137246 Em:AW196506 Em:AW324433 Em:BB702213 Em:BB704435 FT Em:BE199357 Em:BE251283 Em:BE251946 Em:BE254824 Em:BE267067 FT Em:BE541349 Em:BE744671 Em:BE746849 Em:BF342275 Em:BG068882 FT Em:BG329053 Em:BG394444 Em:BG717328 Em:BG831437 Em:BI185094 FT Em:BI337652 Em:BI826785 Em:BI858190 Em:BM015479 Em:BM226753 FT Em:BM228387 Em:BM228409 Em:BM228482 Em:BM229878 Em:BM243716 FT Em:BM244817 Em:F31106 Em:F36537" FT /note="match: cDNAs: Em:AF258661.1 Em:AK017312.1 FT Em:AK054568.1 Em:BC000811.1 Em:BC002158.1 Em:BC006104.1" FT CDS join(7390257..7390306,7393332..7393536,7395286..7395376, FT 7396936..7397005,7398931..7398973,7401191..7401283, FT 7402836..7402948,7403050..7403130,7404174..7404260, FT 7404651..7404788,7405151..7405254,7405482..7405588, FT AL138878.10:3945..4010,AL138878.10:4891..5010, FT AL138878.10:6448..6501,AL138878.10:7797..7949, FT AL138878.10:10890..11000) FT /gene="RIOK1" FT /locus_tag="RP11-288G3.1-001" FT /standard_name="OTTHUMP00000015999" FT /product="RIO kinase 1 (yeast)" FT /note="match: proteins: Sw:Q9BRS2 Sw:Q9BRS2 Tr:Q99LZ1 FT Tr:Q9CU84 Tr:Q9H2L9" FT /protein_id="CAI16452.1" FT /translation="MSRVVPGQFDDADSSDSENRDLKTVKEKDDILFEDLQDNVNENGE FT GEIEDEEEEGYDDDDDDWDWDEGVGKLAKGYVWNGGSNPQANRQTSDSSSAKMSTPADK FT VLRKFENKINLDKLNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQVLDPRTRMIL FT FKMLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYKTSILVFKDRDKYVSGEFR FT FRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAP FT LLKNVQLSESKARELYLQVIQYMRRMYQDARLVHADLSEFNMLYHGGGVYIIDVSQSVE FT HDHPHALEFLRKDCANVNDFFMRHSVAVMTVRELFEFVTDPSITHENMDAYLSKAMEIA FT SQRTKEERSSQDHVDEEVFKRAYIPRTLNEVKNYERDMDIIMKLKEEDMAMNAQQDNIL FT YQTVTGLKKDLSGVQKVPALLENQVEERTCSDSEDIGSSECSDTDSEEQGDHARPKKHT FT TDPDIDKKERKKMVKEAQREKRKNKIPKHVKKRKEKTAKTKKGK" FT mRNA join(7402880..7403130,7404174..7404260,7404651..7404788, FT 7405151..7405254,7405482..7405588) FT /gene="RIOK1" FT /locus_tag="RP11-288G3.1-002" FT /product="RIO kinase 1 (yeast)" FT /note="match: ESTs: Em:AF258661 Em:BC000811" FT misc_feature 7406674 FT /note="Clone_right_end: RP11-69L16" FT misc_feature 7406775..7534994 FT /note="annotated region of clone" FT polyA_signal 7418249..7418254 FT polyA_site 7418270 FT CDS complement(7481327..>7482827) FT /pseudo FT /locus_tag="RP11-288G3.2-001" FT /product="hetergeneous riboprotein L (HNRNP L) pseudogene" FT /note="match: proteins: Sw:O95758 Sw:P26599 Sw:Q00438 FT Sw:Q29099 Sw:Q8R081 Sw:Q91Z31 Sw:Q9Z118" FT CDS 7506436..7506782 FT /pseudo FT /locus_tag="RP11-288G3.3-001" FT /product="ribosomal protein S26 pseudogene" FT /note="match: proteins: Sw:O93931 Sw:P13008 Sw:P21772 FT Sw:P27085 Sw:P30742 Sw:P49171 Sw:P49206 Sw:P49216 Sw:P62856 FT Sw:P62856 Sw:Q9UT56 Sw:Q9UTG4" FT CDS complement(7516833..7518073) FT /pseudo FT /locus_tag="RP11-288G3.4-001" FT /product="isocitrate dehydrogenase 1 (IDH1) pseudogene" FT /note="match: proteins: Sw:O75874 Sw:O88844 Sw:P33198 FT Sw:P41562 Sw:P41939 Sw:P48735 Sw:P50217 Sw:P81294 Sw:Q9XSG3 FT Sw:Q9Z2K8 Sw:Q9Z2K9 Tr:O22673 Tr:O82585" FT misc_feature 7534795 FT /note="Clone_left_end: RP3-512B11" FT mRNA join(AL139095.15:150494..150738,AL139095.15:153764..153968, FT AL139095.15:155718..155808,AL139095.15:157368..157437, FT AL139095.15:159363..159405,AL139095.15:161623..161715, FT AL139095.15:163268..163380,AL139095.15:163482..163562, FT AL139095.15:164606..164692,AL139095.15:165083..165220, FT AL139095.15:165583..165686,AL139095.15:165914..166020, FT 7410619..7410684,7411565..7411684,7413122..7413175, FT 7414471..7414623,7417564..7418270) FT /gene="RIOK1" FT /locus_tag="RP11-288G3.1-001" FT /product="RIO kinase 1 (yeast)" FT /note="match: ESTs: Em:AA007617 Em:AA085379 Em:AA127539 FT Em:AA702832 Em:AA778768 Em:AA856137 Em:AI118179 Em:AI465698 FT Em:AI686567 Em:AL528030 Em:AL550825 Em:AL556930 Em:AW073551 FT Em:AW137246 Em:AW196506 Em:AW324433 Em:BB702213 Em:BB704435 FT Em:BE199357 Em:BE251283 Em:BE251946 Em:BE254824 Em:BE267067 FT Em:BE541349 Em:BE744671 Em:BE746849 Em:BF342275 Em:BG068882 FT Em:BG329053 Em:BG394444 Em:BG717328 Em:BG831437 Em:BI185094 FT Em:BI337652 Em:BI826785 Em:BI858190 Em:BM015479 Em:BM226753 FT Em:BM228387 Em:BM228409 Em:BM228482 Em:BM229878 Em:BM243716 FT Em:BM244817 Em:F31106 Em:F36537" FT /note="match: cDNAs: Em:AF258661.1 Em:AK017312.1 FT Em:AK054568.1 Em:BC000811.1 Em:BC002158.1 Em:BC006104.1" FT CDS join(AL139095.15:150689..150738,AL139095.15:153764..153968, FT AL139095.15:155718..155808,AL139095.15:157368..157437, FT AL139095.15:159363..159405,AL139095.15:161623..161715, FT AL139095.15:163268..163380,AL139095.15:163482..163562, FT AL139095.15:164606..164692,AL139095.15:165083..165220, FT AL139095.15:165583..165686,AL139095.15:165914..166020, FT 7410619..7410684,7411565..7411684,7413122..7413175, FT 7414471..7414623,7417564..7417674) FT /gene="RIOK1" FT /locus_tag="RP11-288G3.1-001" FT /standard_name="OTTHUMP00000015999" FT /product="RIO kinase 1 (yeast)" FT /note="match: proteins: Sw:Q9BRS2 Sw:Q9BRS2 Tr:Q99LZ1 FT Tr:Q9CU84 Tr:Q9H2L9" FT /protein_id="CAH72013.1" FT /translation="MSRVVPGQFDDADSSDSENRDLKTVKEKDDILFEDLQDNVNENGE FT GEIEDEEEEGYDDDDDDWDWDEGVGKLAKGYVWNGGSNPQANRQTSDSSSAKMSTPADK FT VLRKFENKINLDKLNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQVLDPRTRMIL FT FKMLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYKTSILVFKDRDKYVSGEFR FT FRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAP FT LLKNVQLSESKARELYLQVIQYMRRMYQDARLVHADLSEFNMLYHGGGVYIIDVSQSVE FT HDHPHALEFLRKDCANVNDFFMRHSVAVMTVRELFEFVTDPSITHENMDAYLSKAMEIA FT SQRTKEERSSQDHVDEEVFKRAYIPRTLNEVKNYERDMDIIMKLKEEDMAMNAQQDNIL FT YQTVTGLKKDLSGVQKVPALLENQVEERTCSDSEDIGSSECSDTDSEEQGDHARPKKHT FT TDPDIDKKERKKMVKEAQREKRKNKIPKHVKKRKEKTAKTKKGK" FT misc_feature 7534995..7599250 FT /note="annotated region of clone" FT mRNA join(7541870..7542318,7555951..7556053,7558349..7558497, FT 7559459..7559633,7562885..7563013,7563969..7564019, FT 7565592..7565753,7566610..7566714,7567587..7567682, FT 7568014..7568139,7568670..7568822,7569419..7569573, FT 7570670..7570796,7571616..7571817,7572075..7572301, FT 7574319..7574485,7574890..7575028,7575528..7575721, FT 7576527..7576689,7577192..7577275,7578012..7578119, FT 7578697..7578795,7579508..7581802,7582875..7586804) FT /gene="DSP" FT /locus_tag="RP3-512B11.1-001" FT /product="desmoplakin" FT /note="match: ESTs: Em:AA025851 Em:AA026480 Em:AA026654 FT Em:AA026863 Em:AA039975 Em:AA040018 Em:AA056401 Em:AA056527 FT Em:AA088866 Em:AA099891 Em:AA128470 Em:AA131077 Em:AA131128 FT Em:AA149191 Em:AA337270 Em:AA340777 Em:AA488478 Em:AA515500 FT Em:AA552300 Em:AA562503 Em:AA602182 Em:AA644381 Em:AA658154 FT Em:AA702424 Em:AA782066 Em:AA782109 Em:AA852212 Em:AA852213 FT Em:AA857316 Em:AA946936 Em:AI022862 Em:AI023316 Em:AI025932 FT Em:AI078449 Em:C03378 Em:C18467 Em:D12062 Em:H27408 FT Em:H30146 Em:H90899 Em:H91011 Em:H93284 Em:N29754 Em:N57176 FT Em:N84767 Em:R20904 Em:R58704 Em:T48793 Em:T87181 Em:T87267 FT Em:W19287 Em:W32490 Em:W39488 Em:W74149 Em:W95070" FT /note="match: cDNAs: Em:J05211 Em:M77830" FT CDS join(7542149..7542318,7555951..7556053,7558349..7558497, FT 7559459..7559633,7562885..7563013,7563969..7564019, FT 7565592..7565753,7566610..7566714,7567587..7567682, FT 7568014..7568139,7568670..7568822,7569419..7569573, FT 7570670..7570796,7571616..7571817,7572075..7572301, FT 7574319..7574485,7574890..7575028,7575528..7575721, FT 7576527..7576689,7577192..7577275,7578012..7578119, FT 7578697..7578795,7579508..7581802,7582875..7586111) FT /gene="DSP" FT /locus_tag="RP3-512B11.1-001" FT /standard_name="OTTHUMP00000016001" FT /product="desmoplakin" FT /note="match: proteins: Sw:P15924 Sw:Q03001 Sw:Q9QXZ0" FT /protein_id="CAA19927.1" FT /translation="MSCNGGSHPRINTLGRMIRAESGPDLRYEVTSGGGGTSRMYYSRR FT GVITDQNSDGYCQTGTMSRHQNQNTIQELLQNCSDCLMRAELIVQPELKYGDGIQLTRS FT RELDECFAQANDQMEILDSLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPRVRR FT ASSKGGGGYTCQSGSGWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHR FT GIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSR FT EIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQ FT HPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSI FT RKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSN FT KPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNP FT LAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDY FT MKTIADLELHYQEFIRNSQGSEMFGDDDKRKIQSQFTDAQKHYQTLVIQLPGYPQHQTV FT TTTEITHHGTCQDVNHNKVIETNRENDKQETWMLMELQKIRRQIEHCEGRMTLKNLPLA FT DQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGSEKYCYLQNEVFGLFQKL FT ENINGVTDGYLNSLCTVRALLQAILQTEDMLKVYEARLTEEETVCLDLDKVEAYRCGLK FT KIKNDLNLKKSLLATMKTELQKAQQIHSQTSQQYPLYDLDLGKFGEKVTQLTDRWQRID FT KQIDFRLWDLEKQIKQLRNYRDNYQAFCKWLYDAKRRQDSLESMKFGDSNTVMRFLNEQ FT KNLHSEISGKRDKSEEVQKIAELCANSIKDYELQLASYTSGLETLLNIPIKRTMIQSPS FT GVILQEAADVHARYIELLTRSGDYYRFLSEMLKSLEDLKLKNTKIEVLEEELRLARDAN FT SENCNKNKFLDQNLQKYQAECSQFKAKLASLEELKRQAELDGKSAKQNLDKCYGQIKEL FT NEKITRLTYEIEDEKRRRKSVEDRFDQQKNDYDQLQKARQCEKENLGWQKLESEKAIKE FT KEYEIERLRVLLQEEGTRKREYENELAKVRNHYNEEMSNLRNKYETEINITKTTIKEIS FT MQKEDDSKNLRNQLDRLSRENRDLKDEIVRLNDSILQATEQRRRAEENALQQKACGSEI FT MQKKQHLEIELKQVMQQRSEDNARHKQSLEEAAKTIQDKNKEIERLKAEFQEEAKRRWE FT YENELSKVRNNYDEEIISLKNQFETEINITKTTIHQLTMQKEEDTSGYRAQIDNLTREN FT RSLSEEIKRLKNTLTQTTENLRRVEEDIQQQKATGSEVSQRKQQLEVELRQVTQMRTEE FT SVRYKQSLDDAAKTIQDKNKEIERLKQLIDKETNDRKCLEDENARLQRVQYDLQKANSS FT ATETINKLKVQEQELTRLRIDYERVSQERTVKDQDITRFQNSLKELQLQKQKVEEELNR FT LKRTASEDSCKRKKLEEELEGMRRSLKEQAIKITNLTQQLEQASIVKKRSEDDLRQQRD FT VLDGHLREKQRTQEELRRLSSEVEALRRQLLQEQESVKQAHLRNEHFQKAIEDKSRSLN FT ESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKNATILELRSQL FT QISNNRTLELQGLINDLQRERENLRQEIEKFQKQALEASNRIQESKNQCTQVVQERESL FT LVKIKVLEQDKARLQRLEDELNRAKSTLEAETRVKQRLECEKQQIQNDLNQWKTQYSRK FT EEAIRKIESEREKSEREKNSLRSEIERLQAEIKRIEERCRRKLEDSTRETQSQLETERS FT RYQREIDKLRQRPYGSHRETQTECEWTVDTSKLVFDGLRKKVTAMQLYECQLIDKTTLD FT KLLKGKKSVEEVASEIQPFLRGAGSIAGASASPKEKYSLVEAKRKKLISPESTVMLLEA FT QAATGGIIDPHRNEKLTVDSAIARDLIDFDDRQQIYAAEKAITGFDDPFSGKTVSVSEA FT IKKNLIDRETGMRLLEAQIASGGVVDPVNSVFLPKDVALARGLIDRDLYRSLNDPRDSQ FT KNFVDPVTKKKVSYVQLKERCRIEPHTGLLLLSVQKRSMSFQGIRQPVTVTELVDSGIL FT RPSTVNELESGQISYDEVGERIKDFLQGSSCIAGIYNETTKQKLGIYEAMKIGLVRPGT FT ALELLEAQAATGFIVDPVSNLRLPVEEAYKRGLVGIEFKEKLLSAERAVTGYNDPETGN FT IISLFQAMNKELIEKGHGIRLLEAQIATGGIIDPKESHRLPVDIAYKRGYFNEELSEIL FT SDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETGLCLLPLKEKKKQVQTSQKNTLRKR FT RVVIVDPETNKEMSVQEAYKKGLIDYETFKELCEQECEWEEITITGSDGSTRVVLVDRK FT TGSQYDIQDAIDKGLVDRKFFDQYRSGSLSLTQFADMISLKNGVGTSSSMGSGVSDDVF FT SSSRHESVSKISTISSVRNLTIRSSSFSDTLEESSPIAAIFDTENLEKISITEGIERGI FT VDSITGQRLLEAQACTGGIIHPTTGQKLSLQDAVSQGVIDQDMATRLKPAQKAFIGFEG FT VKGKKKMSAAEAVKEKWLPYEAGQRFLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGR FT AAQRLQDTSSYAKILTCPKTKLKISYKDAINRSMVEDITGLRLLEAASVSSKGLPSPYN FT MSSAPGSRSGSRSGSRSGSRSGSRSGSRRGSFDATGNSSYSYSYSFSSSSIGH" FT polyA_signal 7586786..7586791 FT polyA_site 7586804 FT mRNA join(7590432..7590646,7593967..7594080,7594332..7594392, FT 7595260..7595334,AL390026.1:2419..2607, FT AL390026.1:3706..3827,AL390026.1:6481..6569, FT AL390026.1:7114..7278,AL390026.1:9908..12941) FT /gene="C6orf151" FT /locus_tag="RP3-512B11.2-001" FT /product="chromosome 6 open reading frame 151" FT /note="match: ESTs: Em:AL117995 Em:BF516050 Em:R37571.1 FT Em:R42194.1" FT /note="match: cDNAs: Em:AL832462.1 Em:BC114630.1 FT Em:BC114631.1" FT CDS join(7590491..7590646,7593967..7594080,7594332..7594392, FT 7595260..7595334,AL390026.1:2419..2607, FT AL390026.1:3706..3827,AL390026.1:6481..6569, FT AL390026.1:7114..7278,AL390026.1:9908..9956) FT /gene="C6orf151" FT /locus_tag="RP3-512B11.2-001" FT /standard_name="OTTHUMP00000016002" FT /product="chromosome 6 open reading frame 151" FT /note="match: proteins: Sw:Q6IEG0.2" FT /protein_id="CAI21647.2" FT /translation="MEGEPPPVEERRRLQEELNEFVESGCRTLEEVTASLGWDLDSLDP FT GEEEAAEDEVVICPYDSNHHMPKSSLAKHMASCRLRKMGYTKEEEDEMYNPEFFYENVK FT IPSITLNKDSQFQIIKQARTAVGKDSDCYNQRIYSSLPVEVPLNHKRFVCDLTQADRLA FT LYDFVVEETKKKRSDSQIIENDSDLFVDLAAKINQDNSRKSPKSYLEILAEVRDYKRRR FT QSYRAKNVHITKKSYTEVIRDVINVHMEELSNHWQEEQEKAEDDAEKNEERRSASVDSR FT QSGGSYLDAECSRHRRDRSRSPHKRKRNKDKDKNCESRRRKERDGERHHSHKRRKQKI" FT misc_feature 7599251..7630684 FT /note="annotated region of clone" FT mRNA join(7599906..7601757,7602856..7602977,7605631..7605719, FT 7606264..7606428,7609058..7609439) FT /gene="C6orf151" FT /locus_tag="RP3-512B11.2-002" FT /product="chromosome 6 open reading frame 151" FT /note="match: cDNAs: Em:AK056796.1" FT polyA_signal 7609419..7609424 FT polyA_site 7609439 FT polyA_signal 7612174..7612179 FT polyA_site 7612198 FT CDS 7620655..7621111 FT /pseudo FT /locus_tag="RP3-336K20__B.2-001" FT /product="ribosomal protein L29 (RPL29) pseudogene" FT /note="match: proteins: Sw:P25886 Sw:P47914 Sw:P47915 FT Sw:Q95281 Tr:Q9XST9" FT misc_feature 7630584 FT /note="Clone_right_end: RP3-336K20" FT mRNA join(AL031058.1:55538..55752,AL031058.1:59073..59186, FT AL031058.1:59438..59498,AL031058.1:60366..60440, FT 7601569..7601757,7602856..7602977,7605631..7605719, FT 7606264..7606428,7609058..7612091) FT /gene="C6orf151" FT /locus_tag="RP3-512B11.2-001" FT /product="chromosome 6 open reading frame 151" FT /note="match: ESTs: Em:AL117995 Em:BF516050 Em:R37571.1 FT Em:R42194.1" FT /note="match: cDNAs: Em:AL832462.1 Em:BC114630.1 FT Em:BC114631.1" FT CDS join(AL031058.1:55597..55752,AL031058.1:59073..59186, FT AL031058.1:59438..59498,AL031058.1:60366..60440, FT 7601569..7601757,7602856..7602977,7605631..7605719, FT 7606264..7606428,7609058..7609106) FT /gene="C6orf151" FT /locus_tag="RP3-512B11.2-001" FT /standard_name="OTTHUMP00000016002" FT /product="chromosome 6 open reading frame 151" FT /note="match: proteins: Sw:Q6IEG0.2" FT /protein_id="CAI20238.1" FT /translation="MEGEPPPVEERRRLQEELNEFVESGCRTLEEVTASLGWDLDSLDP FT GEEEAAEDEVVICPYDSNHHMPKSSLAKHMASCRLRKMGYTKEEEDEMYNPEFFYENVK FT IPSITLNKDSQFQIIKQARTAVGKDSDCYNQRIYSSLPVEVPLNHKRFVCDLTQADRLA FT LYDFVVEETKKKRSDSQIIENDSDLFVDLAAKINQDNSRKSPKSYLEILAEVRDYKRRR FT QSYRAKNVHITKKSYTEVIRDVINVHMEELSNHWQEEQEKAEDDAEKNEERRSASVDSR FT QSGGSYLDAECSRHRRDRSRSPHKRKRNKDKDKNCESRRRKERDGERHHSHKRRKQKI" FT misc_feature 7632655..7632817 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 7635468..7635537 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 7636081..7636107 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 7637297..7637403 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 7651455 FT /note="Clone_left_end: RP1-119C5" FT misc_feature 7651655..7804340 FT /note="annotated region of clone" FT mRNA join(7727030..7727852,AL133541.21:41133..41325, FT AL133541.21:57444..57592,AL133541.21:58294..58491, FT AL133541.21:75067..75143,AL133541.21:75984..76094, FT AL133541.21:76187..77415) FT /gene="BMP6" FT /locus_tag="RP1-126E20.2-001" FT /product="bone morphogenetic protein 6" FT /note="match: ESTs: Em:AI923557 Em:AI951593" FT /note="match: cDNAs: Em:M60315.1" FT CDS join(7727189..7727852,AL133541.21:41133..41325, FT AL133541.21:57444..57592,AL133541.21:58294..58491, FT AL133541.21:75067..75143,AL133541.21:75984..76094, FT AL133541.21:76187..76336) FT /gene="BMP6" FT /locus_tag="RP1-126E20.2-001" FT /standard_name="OTTHUMP00000016006" FT /product="bone morphogenetic protein 6" FT /note="match: proteins: Sw:P20722 Sw:P22004 Tr:P97835" FT /protein_id="CAI19426.1" FT /translation="MPGLGRRAQWLCWWWGLLCSCCGPPPLRPPLPAAAAAAAGGQLLG FT DGGSPGRTEQPPPSPQSSSGFLYRRLKTQEKREMQKEILSVLGLPHRPRPLHGLQQPQP FT PALRQQEEQQQQQQLPRGEPPPGRLKSAPLFMLDLYNALSADNDEDGASEGERQQSWPH FT EAASSSQRRQPPPGAAHPLNRKSLLAPGSGSGGASPLTSAQDSAFLNDADMVMSFVNLV FT EYDKEFSPRQRHHKEFKFNLSQIPEGEVVTAAEFRIYKDCVMGSFKNQTFLISIYQVLQ FT EHQHRDSDLFLLDTRVVWASEEGWLEFDITATSNLWVVTPQHNMGLQLSVVTRDGVHVH FT PRAAGLVGRDGPYDKQPFMVAFFKVSEVHVRTTRSASSRRRQQSRNRSTQSQDVARVSS FT ASDYNSSELKTACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNH FT AIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGCH" FT misc_feature 7728803 FT /note="Clone_left_end: RP3-327D12" FT misc_feature 7780312 FT /note="Clone_left_end: RP1-126E20" FT misc_feature 7786528 FT /note="Clone_right_end: RP11-146G22" FT misc_feature 7804240 FT /note="Clone_right_end: RP1-119C5" FT misc_feature 7804341..7922192 FT /note="annotated region of clone" FT misc_feature 7861485 FT /note="Clone_right_end: RP3-327D12" FT mRNA join(AL135778.9:75476..76298,7845373..7845565, FT 7861684..7861832,7862534..7862731,7879307..7879383, FT 7880224..7880334,7880427..7881655) FT /gene="BMP6" FT /locus_tag="RP1-126E20.2-001" FT /product="bone morphogenetic protein 6" FT /note="match: ESTs: Em:AI923557 Em:AI951593" FT /note="match: cDNAs: Em:M60315.1" FT CDS join(AL135778.9:75635..76298,7845373..7845565, FT 7861684..7861832,7862534..7862731,7879307..7879383, FT 7880224..7880334,7880427..7880576) FT /gene="BMP6" FT /locus_tag="RP1-126E20.2-001" FT /standard_name="OTTHUMP00000016006" FT /product="bone morphogenetic protein 6" FT /note="match: proteins: Sw:P20722 Sw:P22004 Tr:P97835" FT /protein_id="CAI19472.1" FT /translation="MPGLGRRAQWLCWWWGLLCSCCGPPPLRPPLPAAAAAAAGGQLLG FT DGGSPGRTEQPPPSPQSSSGFLYRRLKTQEKREMQKEILSVLGLPHRPRPLHGLQQPQP FT PALRQQEEQQQQQQLPRGEPPPGRLKSAPLFMLDLYNALSADNDEDGASEGERQQSWPH FT EAASSSQRRQPPPGAAHPLNRKSLLAPGSGSGGASPLTSAQDSAFLNDADMVMSFVNLV FT EYDKEFSPRQRHHKEFKFNLSQIPEGEVVTAAEFRIYKDCVMGSFKNQTFLISIYQVLQ FT EHQHRDSDLFLLDTRVVWASEEGWLEFDITATSNLWVVTPQHNMGLQLSVVTRDGVHVH FT PRAAGLVGRDGPYDKQPFMVAFFKVSEVHVRTTRSASSRRRQQSRNRSTQSQDVARVSS FT ASDYNSSELKTACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNH FT AIVQTLVHLMNPEYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGCH" FT polyA_signal 7881629..7881634 FT polyA_site 7881655 FT polyA_site complement(7881750) FT polyA_signal complement(7881766..7881771) FT mRNA complement(join(7881750..7883499,7884592..7884721, FT 7886194..7886276,7888938..7889678)) FT /gene="TXNDC5" FT /locus_tag="RP1-126E20.1-002" FT /product="thioredoxin domain containing 5" FT /note="match: cDNAs: Em:AK025006.1" FT mRNA complement(join(7881750..7883499,7884592..7884721, FT 7886194..7886276,7888938..7889081,7889728..7889814, FT 7891854..7891969,7895339..7895435,7899809..7899914, FT 7904807..7904956,7910747..7911047)) FT /gene="TXNDC5" FT /locus_tag="RP1-126E20.1-001" FT /product="thioredoxin domain containing 5" FT /note="match: ESTs: Em:AA083479 Em:AA503078 Em:AA507028 FT Em:AA573738 Em:AA582834 Em:AI140368 Em:AL581441 Em:AW241212 FT Em:AW410520 Em:AW571893 Em:AW631463 Em:AW732739 Em:BF726049 FT Em:BG107229 Em:BG333158 Em:BI333289" FT /note="match: cDNAs: Em:BC001199.1 Em:BC016252.1" FT CDS complement(join(7883377..7883499,7884592..7884721, FT 7886194..7886276,7888938..7889081,7889728..7889814, FT 7891854..7891969,7895339..7895435,7899809..7899914, FT 7904807..7904956,7910747..7911009)) FT /gene="TXNDC5" FT /locus_tag="RP1-126E20.1-001" FT /standard_name="OTTHUMP00000016005" FT /product="thioredoxin domain containing 5" FT /note="match: proteins: Sw:P05307 Sw:P07237 Sw:P09102 FT Sw:P12865 Sw:P21195 Tr:O17908 Tr:O76191 Tr:O96460 Tr:P93358 FT Tr:Q26593 Tr:Q9I8I5 Tr:Q9VYV3" FT /protein_id="CAI19473.1" FT /translation="MPARPGRLLPLLARPAALTALLLLLLGHGGGGRWGARAQEAAAAA FT ADGPPAADGEDGQDPHSKHLYTADMFTHGIQSAAHFVMFFAPWCGHCQRLQPTWNDLGD FT KYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENW FT MLQTLNEEPVTPEPEVEPPSAPELKQGLYELSASNFELHVAQGDHFIKFFAPWCGHCKA FT LAPTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKR FT DLESLREYVESQLQRTETGATETVTPSEAPVLAAEPEADKGTVLALTENNFDDTIAEGI FT TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL FT LLFRGGKKVSEHSGGRDLDSLHRFVLSQAKDEL" FT misc_feature 7921744..7921752 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 7921993 FT /note="Clone_left_end: RP1-303A1" FT misc_feature 7922193..8026623 FT /note="annotated region of clone" FT CDS complement(7938663..7939555) FT /pseudo FT /locus_tag="RP1-303A1.1-001" FT /product="coxsackie virus and adenovirus receptor (CXADR) FT pseudogene" FT /note="match: proteins: Sw:P78310 Sw:P97792" FT mRNA join(AL023694.1:18509..18658,AL023694.1:20307..20389, FT AL023694.1:41655..41784,AL023694.1:56498..56532, FT complement(8013800..8016061)) FT /locus_tag="RP1-303A1.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA020875 Em:AA020875.1 Em:AA147044 FT Em:AA147044.1 Em:AA147135 Em:AA147135.1 Em:AA282152 FT Em:AA282152.1 Em:AA282153 Em:AA282153.1 Em:AA448778 FT Em:AA448778.1 Em:AA449797 Em:AA449797.1 Em:AA460543 FT Em:AA460543.1 Em:AA460558 Em:AA460558.1 Em:AA460559 FT Em:AA460559.1 Em:AA621410 Em:AA621410.1 Em:AA653396 FT Em:AA653396.1 Em:AA736597 Em:AA736597.1 Em:AA742614.1 FT Em:AA772943 Em:AA772943.1 Em:AA810755 Em:AA810755.1 FT Em:AA825197 Em:AA825197.1 Em:AA854077 Em:AA854077.1 FT Em:AA916637 Em:AA916637.1 Em:AA928389 Em:AA928389.1 FT Em:AI186619 Em:AI186619.1 Em:AI280875 Em:AI280875.1 FT Em:AI289115 Em:AI289115.1 Em:AI290931 Em:AI290931.1 FT Em:AI422310 Em:AI422310.1 Em:AI624228.1 Em:AI653662.1 FT Em:AI683907.1 Em:AI694681.1 Em:AI763289.1 Em:AI768114.1 FT Em:AL710964.1 Em:AV686754.1 Em:AV697714.1 Em:AW191991.1 FT Em:AW439596.1 Em:AW608814.1 Em:BB844559.1 Em:BG779499.1 FT Em:BM808475.1 Em:BM829259.1 Em:BM906746.1 Em:HSAAABIBP FT Em:SSD48 Em:X91733 Em:Z20053" FT /note="match: cDNAs: Em:AF426433.1 Em:AF426434.1 FT Em:AK025442.1 Em:BC023184.1 Em:BC024720.1" FT CDS join(AL023694.1:18547..18658,AL023694.1:20307..20389, FT AL023694.1:41655..41784,AL023694.1:56498..56532, FT complement(8015882..8016061)) FT /locus_tag="RP1-303A1.4-001" FT /standard_name="OTTHUMP00000016007" FT /product="novel protein" FT /note="match: proteins: Sw:Q8R015" FT /protein_id="CAI20106.1" FT /translation="MSGGGTETPVGCEAAPGGGSKKRDSLGTAGSAHLIIKDLGEIHSR FT LLDHRPVIQGETRYFVKEFEEKRGLREMRVLENLKNMIHETNEHTLPKCRDTMRDSLSQ FT VLQRLQAANDSVCRLQIHSDHLVASEKQHMLQWDNFMKEQPNKRAEVDEEHRKAMERLK FT EQYAEMEKDLAKFSTF" FT misc_feature 7970297 FT /note="Clone_right_end: RP1-126E20" FT CDS 7986770..7988425 FT /pseudo FT /locus_tag="RP1-303A1.2-001" FT /product="1-phosphatidylinositol-4-phosphate-5-kinase FT (PTPDINS(4)P-5-kinase, EC 2.7.1.68) pseudogene" FT /note="match: proteins: Sw:O13010 Sw:O14986 Sw:O60331 FT Sw:O70161 Sw:O70172 Sw:P48426 Sw:P70181 Sw:P70182 Sw:P78356 FT Sw:Q99755 Sw:Q9SUI2 Tr:O01759 Tr:P78517 Tr:Q94544" FT polyA_site complement(8013800) FT polyA_signal complement(8013812..8013817) FT misc_feature 8026424 FT /note="Clone_left_end: RP3-511E16" FT misc_feature complement(8026624..8083155) FT /note="annotated region of clone" FT polyA_site complement(8079630) FT CDS complement(join(8080123..8080263,AL451187.9:7364..7459, FT AL355499.15:5433..5633,AL355499.15:10601..10687)) FT /gene="EEF1E1" FT /locus_tag="RP3-511E16.1-002" FT /standard_name="OTTHUMP00000016008" FT /product="eukaryotic translation elongation factor 1 FT epsilon 1" FT /note="match: proteins: Sw:O43324 Sw:P70102 Sw:Q9D1M4" FT /protein_id="CAI21644.1" FT /translation="MAAAAELSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLT FT TIAAHLVKQANKEYLLGSTAEEKAIVQQWLEYRVTQVDGHSSKNDIHTLLKDLNSYLED FT KVYLTGYNFTLADILLYYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPGIRQHLSSVV FT FIKNRLYTNSH" FT mRNA complement(join(8079630..8080263,AL451187.9:7364..7459, FT AL355499.15:5433..5633,AL355499.15:10601..10741)) FT /gene="EEF1E1" FT /locus_tag="RP3-511E16.1-002" FT /product="eukaryotic translation elongation factor 1 FT epsilon 1" FT /note="match: cDNAs: Em:AB011079.1 Em:AF054186.1 FT Em:AK003335.1 Em:AK009889.1 Em:BC005291.1 Em:U67146.1" FT /note="match: ESTs: Em:AA364719 Em:AA742176 Em:AA975370 FT Em:AI394376 Em:AI469978 Em:AL552220 Em:AV714140 Em:AW517465 FT Em:AW960417 Em:AW968551 Em:BE681939 Em:BE738640 Em:BF210504 FT Em:BG183263.1 Em:BG188508 Em:BG190642 Em:BG198130 FT Em:BG200359.1 Em:BG202947.1 Em:BG203442.1 Em:BG210772.1 FT Em:BG211809.1 Em:BG527432 Em:BG529922 Em:BI552521 FT Em:T59386.1" FT mRNA complement(join(AL096800.20:91708..93969,8026624..8026658, FT 8041372..8041501,8062767..8062849,8064498..8064647)) FT /locus_tag="RP1-303A1.4-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AF426433.1 Em:AF426434.1 FT Em:AK025442.1 Em:BC023184.1 Em:BC024720.1" FT /note="match: ESTs: Em:AA020875 Em:AA020875.1 Em:AA147044 FT Em:AA147044.1 Em:AA147135 Em:AA147135.1 Em:AA282152 FT Em:AA282152.1 Em:AA282153 Em:AA282153.1 Em:AA448778 FT Em:AA448778.1 Em:AA449797 Em:AA449797.1 Em:AA460543 FT Em:AA460543.1 Em:AA460558 Em:AA460558.1 Em:AA460559 FT Em:AA460559.1 Em:AA621410 Em:AA621410.1 Em:AA653396 FT Em:AA653396.1 Em:AA736597 Em:AA736597.1 Em:AA742614.1 FT Em:AA772943 Em:AA772943.1 Em:AA810755 Em:AA810755.1 FT Em:AA825197 Em:AA825197.1 Em:AA854077 Em:AA854077.1 FT Em:AA916637 Em:AA916637.1 Em:AA928389 Em:AA928389.1 FT Em:AI186619 Em:AI186619.1 Em:AI280875 Em:AI280875.1 FT Em:AI289115 Em:AI289115.1 Em:AI290931 Em:AI290931.1 FT Em:AI422310 Em:AI422310.1 Em:AI624228.1 Em:AI653662.1 FT Em:AI683907.1 Em:AI694681.1 Em:AI763289.1 Em:AI768114.1 FT Em:AL710964.1 Em:AV686754.1 Em:AV697714.1 Em:AW191991.1 FT Em:AW439596.1 Em:AW608814.1 Em:BB844559.1 Em:BG779499.1 FT Em:BM808475.1 Em:BM829259.1 Em:BM906746.1 Em:HSAAABIBP FT Em:SSD48 Em:X91733 Em:Z20053" FT CDS complement(join(AL096800.20:93790..93969,8026624..8026658, FT 8041372..8041501,8062767..8062849,8064498..8064609)) FT /locus_tag="RP1-303A1.4-001" FT /standard_name="OTTHUMP00000016007" FT /product="novel protein" FT /note="match: proteins: Sw:Q8R015" FT /protein_id="CAI21645.1" FT /translation="MSGGGTETPVGCEAAPGGGSKKRDSLGTAGSAHLIIKDLGEIHSR FT LLDHRPVIQGETRYFVKEFEEKRGLREMRVLENLKNMIHETNEHTLPKCRDTMRDSLSQ FT VLQRLQAANDSVCRLQIHSDHLVASEKQHMLQWDNFMKEQPNKRAEVDEEHRKAMERLK FT EQYAEMEKDLAKFSTF" FT misc_feature 8083156..8092167 FT /note="annotated region of clone" FT misc_feature 8091968 FT /note="Clone_left_end: RP11-328K6" FT CDS join(complement(AL355499.15:10601..10687), FT complement(AL355499.15:5433..5633), FT complement(8090419..8090514),AL023694.1:2893..3033) FT /gene="EEF1E1" FT /locus_tag="RP3-511E16.1-002" FT /standard_name="OTTHUMP00000016008" FT /product="eukaryotic translation elongation factor 1 FT epsilon 1" FT /note="match: proteins: Sw:O43324 Sw:P70102 Sw:Q9D1M4" FT /protein_id="CAI14747.1" FT /translation="MAAAAELSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLT FT TIAAHLVKQANKEYLLGSTAEEKAIVQQWLEYRVTQVDGHSSKNDIHTLLKDLNSYLED FT KVYLTGYNFTLADILLYYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPGIRQHLSSVV FT FIKNRLYTNSH" FT mRNA join(complement(AL355499.15:10601..10741), FT complement(AL355499.15:5433..5633), FT complement(8090419..8090514),AL023694.1:2893..3526) FT /gene="EEF1E1" FT /locus_tag="RP3-511E16.1-002" FT /product="eukaryotic translation elongation factor 1 FT epsilon 1" FT /note="match: ESTs: Em:AA364719 Em:AA742176 Em:AA975370 FT Em:AI394376 Em:AI469978 Em:AL552220 Em:AV714140 Em:AW517465 FT Em:AW960417 Em:AW968551 Em:BE681939 Em:BE738640 Em:BF210504 FT Em:BG183263.1 Em:BG188508 Em:BG190642 Em:BG198130 FT Em:BG200359.1 Em:BG202947.1 Em:BG203442.1 Em:BG210772.1 FT Em:BG211809.1 Em:BG527432 Em:BG529922 Em:BI552521 FT Em:T59386.1" FT /note="match: cDNAs: Em:AB011079.1 Em:AF054186.1 FT Em:AK003335.1 Em:AK009889.1 Em:BC005291.1 Em:U67146.1" FT misc_feature 8092168..8290208 FT /note="annotated region of clone" FT mRNA complement(join(8097588..8097700,8101998..8102176)) FT /gene="EEF1E1" FT /locus_tag="RP3-511E16.1-001" FT /product="eukaryotic translation elongation factor 1 FT epsilon 1" FT /note="match: ESTs: Em:AA843362" FT CDS join(complement(8102668..8102754), FT complement(8097500..8097700), FT complement(AL451187.9:7364..7459),AL023694.1:2893..3033) FT /gene="EEF1E1" FT /locus_tag="RP3-511E16.1-002" FT /standard_name="OTTHUMP00000016008" FT /product="eukaryotic translation elongation factor 1 FT epsilon 1" FT /note="match: proteins: Sw:O43324 Sw:P70102 Sw:Q9D1M4" FT /protein_id="CAH72539.1" FT /translation="MAAAAELSLLEKSLGLSKGNKYSAQGERQIPVLQTNNGPSLTGLT FT TIAAHLVKQANKEYLLGSTAEEKAIVQQWLEYRVTQVDGHSSKNDIHTLLKDLNSYLED FT KVYLTGYNFTLADILLYYGLHRFIVDLTVQEKEKYLNVSRWFCHIQHYPGIRQHLSSVV FT FIKNRLYTNSH" FT mRNA join(complement(8102668..8102808), FT complement(8097500..8097700), FT complement(AL451187.9:7364..7459),AL023694.1:2893..3526) FT /gene="EEF1E1" FT /locus_tag="RP3-511E16.1-002" FT /product="eukaryotic translation elongation factor 1 FT epsilon 1" FT /note="match: ESTs: Em:AA364719 Em:AA742176 Em:AA975370 FT Em:AI394376 Em:AI469978 Em:AL552220 Em:AV714140 Em:AW517465 FT Em:AW960417 Em:AW968551 Em:BE681939 Em:BE738640 Em:BF210504 FT Em:BG183263.1 Em:BG188508 Em:BG190642 Em:BG198130 FT Em:BG200359.1 Em:BG202947.1 Em:BG203442.1 Em:BG210772.1 FT Em:BG211809.1 Em:BG527432 Em:BG529922 Em:BI552521 FT Em:T59386.1" FT /note="match: cDNAs: Em:AB011079.1 Em:AF054186.1 FT Em:AK003335.1 Em:AK009889.1 Em:BC005291.1 Em:U67146.1" FT misc_feature 8245697 FT /note="Clone_left_end: RP11-203H2" FT misc_feature 8290108 FT /note="Clone_right_end: RP11-328K6" FT misc_feature 8290209..8391027 FT /note="annotated region of clone" FT mRNA join(8328384..8328510,8329888..8330156,8342558..8342688) FT /locus_tag="RP11-203H2.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA778562" FT polyA_site complement(8342170) FT polyA_signal complement(8342185..8342190) FT mRNA complement(join(8342170..8342881,8343221..8343254)) FT /locus_tag="RP11-203H2.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA127387 Em:AA127506 Em:AI732419 FT Em:AI733741 Em:BG192873 Em:BG198404 Em:BG207803 FT Em:BG213050" FT misc_feature 8390829 FT /note="Clone_left_end: RP3-453H5" FT misc_feature 8391028..8483814 FT /note="annotated region of clone" FT polyA_site complement(8413301) FT polyA_site complement(8413303) FT polyA_site complement(8413304) FT polyA_site complement(8413305) FT polyA_site complement(8413307) FT polyA_signal complement(8413324..8413329) FT CDS complement(join(8413782..8413932,8415141..8415210, FT 8417117..8417228,8417635..8417727,8419813..8419910, FT 8420954..8421061,8422703..8422857,8428170..8428291, FT 8430097..8430390,8434618..8434620)) FT /gene="RP3-453H5.1" FT /locus_tag="RP3-453H5.1-001" FT /standard_name="OTTHUMP00000016009" FT /product="novel protein" FT /note="match: proteins: Sw:Q20787 Sw:Q922Q5 Sw:Q9H1N7 FT Sw:Q9VVD9 Sw:Q9VVD9" FT /protein_id="CAC19504.1" FT /translation="MDLTQQAKDIQNITVQETNKNNSESIECSKITMDLKFNNSRKYIS FT ITVPSKTQTMSPHIKSVDDVVVLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFS FT VEGFKSCGWYLTLVQFAFYSIFGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTS FT LGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNVADVSAAICMSLGLIWFTLADSTTAP FT NFNLTGVVLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSG FT LGPAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALIKIFGALIAVTVTTGRKAMTIVL FT SFIFFAKPFTFQYVWSGLLVVLGIFLNVYSKNMDKIRLPSLYDLINKSVEARKSRTLAQ FT TV" FT mRNA complement(join(8413301..8413932,8415141..8415210, FT 8417117..8417228,8417635..8417727,8419813..8419910, FT 8420954..8421061,8422703..8422857,8428170..8428291, FT 8430097..8430390,8434618..8434663,8435310..8435716)) FT /gene="RP3-453H5.1" FT /locus_tag="RP3-453H5.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA075033 Em:AA075034 Em:AA085746 FT Em:AA091429 Em:AA169452 Em:AA228721 Em:AA229477 Em:AA248996 FT Em:AA357193 Em:AA357194 Em:AA401305 Em:AA491183 Em:AA509875 FT Em:AA618518 Em:AA652231 Em:AA658199 Em:AA722673 Em:AA767728 FT Em:AA779816 Em:AA827775 Em:AA831190 Em:AA832355 Em:AA935887 FT Em:AA995621 Em:AI138958 Em:AI245709 Em:AI302136 Em:AI420298 FT Em:AI445162 Em:AI473986 Em:AI620439 Em:AI680140 Em:AI765568 FT Em:AI769381 Em:AI910858 Em:AI915354 Em:AI936423 Em:AI953586 FT Em:AI955631 Em:AV659500 Em:AV725475 Em:AV728994 Em:AV729224 FT Em:AW015696 Em:AW054987 Em:AW130169 Em:AW197692 Em:AW197776 FT Em:AW197858 Em:AW263277 Em:AW276204 Em:AW276216 Em:AW301242 FT Em:AW467500 Em:AW471313 Em:AW605142 Em:AW605144 Em:AW615082 FT Em:AW630465 Em:AW665902 Em:AW702079 Em:AW786005 Em:AW936129 FT Em:AW971488 Em:AW975096 Em:BE048962 Em:BE247082 Em:BE372189 FT Em:BE645240 Em:BE676861 Em:BE697434 Em:BE697435 Em:BE697436 FT Em:BE697440 Em:BE697442 Em:BE754575 Em:BE815910 Em:BE815919 FT Em:BE906111 Em:BF031801 Em:C03105 Em:H04554 Em:N91539 FT Em:N92598 Em:W07150 Em:W38714" FT /note="match: cDNAs: Em:AF132953 Em:BC006881.1 FT Em:BC006973.1" FT misc_feature 8483620 FT /note="Clone_left_end: RP3-470K1" FT misc_feature 8653346 FT /note="Clone_right_end: RP1-293E23" FT misc_feature 8654496 FT /note="Clone_left_end: RP3-447N10" FT misc_feature 8719739 FT /note="Clone_right_end: RP11-385L2" FT misc_feature 8745072 FT /note="Clone_right_end: RP3-447N10" FT misc_feature 8745173..8791826 FT /note="annotated region of clone" FT misc_feature 8752047..8752191 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 8759443 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 100bp by restriction digest data" FT misc_feature 8768282 FT /note="Clone_left_end: RP11-293C4" FT mRNA join(8784411..8784570,8785350..8785678) FT /locus_tag="RP11-314C16.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI125458 Em:AI701572 Em:AI766256 FT Em:AW194624 Em:BG216527" FT polyA_signal 8785648..8785653 FT polyA_site 8785678 FT misc_feature 8789826 FT /note="Clone_right_end: RP11-314C16" FT misc_feature 8825913 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 350bp by restriction digest data" FT misc_feature 8964255 FT /note="Clone_left_end: RP1-133H11" FT misc_feature 9037908..9164289 FT /note="annotated region of clone" FT polyA_site complement(9124454) FT misc_feature 9141196 FT /note="Clone_left_end: RP1-246P14" FT mRNA complement(join(9124454..9124939,9141254..9141373, FT 9161956..9162010)) FT /locus_tag="RP11-354I10.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA256589 Em:AA256590 Em:AI168724 FT Em:AI417160 Em:H97039" FT misc_feature 9164189 FT /note="Clone_right_end: RP11-354I10" FT misc_feature 9385455 FT /note="Clone_left_end: RP1-103M22" FT misc_feature 9625199..9760634 FT /note="annotated region of clone" FT misc_feature 9756635 FT /note="Clone_left_end: RP3-398A12" FT misc_feature 9760635..9848803 FT /note="annotated region of clone" FT misc_feature 9848804..9890425 FT /note="annotated region of clone" FT misc_feature 9890226 FT /note="Clone_left_end: RP11-380L24" FT misc_feature 9890426..9966577 FT /note="annotated region of clone" FT misc_feature 9903932 FT /note="Clone_right_end: RP3-359L13" FT misc_feature 9966378 FT /note="Clone_left_end: RP3-503N11" FT misc_feature complement(9966578..10061226) FT /note="annotated region of clone" FT misc_feature 10061227..10133679 FT /note="annotated region of clone" FT misc_feature 10106400 FT /note="Clone_left_end: RP11-339A7" FT CDS 10118685..10119485 FT /pseudo FT /locus_tag="RP3-486D24.1-001" FT /product="ribosomal protein L7A (RPL7A) pseudogene" FT /note="match: proteins: Sw:O57592 Sw:P12970 Sw:P12970 FT Sw:P17076 Sw:P29453 Sw:P32429 Sw:P46223 Sw:P46223 Sw:P62424 FT Sw:P62424 Sw:P62425 Sw:Q90YW2" FT misc_feature 10133579 FT /note="Clone_right_end: RP3-486D24" FT misc_feature 10133680..10297597 FT /note="annotated region of clone" FT CDS complement(10214083..10214595) FT /pseudo FT /locus_tag="RP11-339A7.1-001" FT /product="ribosomal protein L21 (RPL21) pseudogene" FT /note="match: proteins: Sw:O09167 Sw:O42706 Sw:O82574 FT Sw:P20280 Sw:P34334 Sw:P38653 Sw:P46778 Sw:P49666 Sw:P49667 FT Sw:Q02753 Sw:Q12672 Sw:Q43291 Sw:Q62523 Tr:Q9ZSU8" FT misc_feature 10297497 FT /note="Clone_right_end: RP11-339A7" FT misc_feature 10307217 FT /note="Clone_left_end: RP1-290I10" FT misc_feature 10311217..10489349 FT /note="annotated region of clone" FT misc_feature 10317800 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 250bp by restriction digest data" FT CDS complement(join(10365857..10366230,10366546..10366815)) FT /pseudo FT /locus_tag="RP1-290I10.2-001" FT /product="ribosomal protein L7 (RPL7) pseudogene" FT /note="match: proteins: Sw:O01802 Sw:P05426 Sw:P11874 FT Sw:P14148 Sw:P17937 Sw:P18124 Sw:P60039 Sw:P60040 Sw:Q9SAI5 FT Tr:O95036 Tr:Q9SCF9" FT polyA_site complement(10396920) FT polyA_signal complement(10396931..10396936) FT polyA_signal complement(10396937..10396942) FT polyA_site complement(10397278) FT polyA_signal complement(10397294..10397299) FT mRNA join(10409573..10409630,10414914..10415284, FT 10415534..10416679) FT /locus_tag="RP1-290I10.6-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK017409.1" FT misc_feature 10410687..10410714 FT /note="Sequence confirmed by consensus sequence from FT AC021626 and AC076970" FT mRNA complement(join(10397643..10398938,10400681..10400822, FT 10402725..10402843,10404741..10404972,10407026..10407077, FT 10410134..10410568,10411803..10412407)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-005" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /note="match: ESTs: Em:AA023414 Em:AA023994 Em:AA143410 FT Em:AF260569.1 Em:AI322525 Em:BB652847 Em:BE265200 FT Em:BE273938 Em:BG034934 Em:BG121643 Em:BG250416 Em:BI409612 FT Em:U17287.1" FT /note="match: cDNAs: Em:AF260569.1 Em:U17287.1" FT CDS complement(join(10398650..10398938,10400681..10400822, FT 10402725..10402843,10404741..10404972,10407026..10407077, FT 10410134..10410568,10411803..10411829)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-005" FT /standard_name="OTTHUMP00000016014" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /protein_id="CAI20064.1" FT /translation="MLVHSFSAMDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNA FT DFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHT FT HRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINI FT PDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYK FT VTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVT FT LLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICK FT EFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEA FT LKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK" FT mRNA join(10414811..10415284,10415520..10415955) FT /locus_tag="RP1-290I10.6-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA234211 Em:AA235184 Em:AA255503 FT Em:AA453692 Em:BF036556 Em:BF308436 Em:BF675508 FT Em:BF805798" FT /note="match: cDNAs: Em:BC012200.1" FT mRNA complement(join(10396920..10398938,10400681..10400822, FT 10402725..10402843,10404741..10404972,10407026..10407077, FT 10410134..10410568,10415174..10415311)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-001" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /note="match: ESTs: Em:AI682417 Em:AL135501 Em:AW269295 FT Em:BE744855 Em:BI049918 Em:BI651779 Em:BI868213 Em:BM015443 FT Em:H00740 Em:N27687 Em:N92681" FT /note="match: cDNAs: Em:M36711.1 Em:X52611.1" FT CDS complement(join(10398650..10398938,10400681..10400822, FT 10402725..10402843,10404741..10404972,10407026..10407077, FT 10410134..10410568,10415174..10415224)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-001" FT /standard_name="OTTHUMP00000016011" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /note="match: proteins: Sw:P05549 Sw:P34056 Sw:Q61313 FT Sw:Q9N0N3 Tr:O13111 Tr:O76923 Tr:O96378 Tr:Q91867 FT Tr:Q9PUL8" FT /protein_id="CAC38370.1" FT /translation="MKMLWKLTDNIKYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAP FT PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQS FT QESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPH FT VEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSL FT LSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG FT RRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNML FT LATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTA FT LQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK" FT mRNA complement(join(10402259..10402843,10404741..10404972, FT 10407026..10407077,10410134..10410568,10415174..10415311)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-002" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /note="match: ESTs: Em:N42113" FT /note="match: cDNAs: Em:M61156.1" FT CDS complement(join(10402510..10402843,10404741..10404972, FT 10407026..10407077,10410134..10410568,10415174..10415224)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-002" FT /standard_name="OTTHUMP00000016012" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /note="match: proteins: Sw:P05549" FT /protein_id="CAC38371.1" FT /translation="MKMLWKLTDNIKYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAP FT PLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQS FT QESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPH FT VEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSL FT LSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAG FT RRKAANVTLLTSLVEGKRIHLLTRRNFLLGKWIIFSGQMFGRILCQLGSFIFAENIARC FT EWNYFMAKRNICMYSYTSILLPSFPLP" FT mRNA complement(join(<10410320..10410568,10417154..10417378)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-004" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /note="match: ESTs: Em:AA075806" FT mRNA complement(join(10398105..10398938,10400681..10400822, FT 10402725..10402843,10404741..10404972,10407026..10407077, FT 10410134..10410568,10419651..10419838)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-003" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /note="match: ESTs: Em:AU100574 Em:BE731767 Em:BG479216 FT Em:BG773817 Em:BG774733 Em:BI159379" FT /note="match: cDNAs: Em:AF260568.1" FT CDS complement(join(10398650..10398938,10400681..10400822, FT 10402725..10402843,10404741..10404972,10407026..10407077, FT 10410134..10410568,10419651..10419683)) FT /gene="TFAP2A" FT /locus_tag="RP1-290I10.1-003" FT /standard_name="OTTHUMP00000016013" FT /product="transcription factor AP-2 alpha (activating FT enhancer binding protein 2 alpha)" FT /protein_id="CAI20065.1" FT /translation="MSILAKMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTP FT NADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLL FT HTHRGLPHQLSGLDPRRDYRRHEDLLHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGI FT NIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSK FT YKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAAN FT VTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQI FT CKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLT FT EALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK" FT polyA_site complement(10423373) FT mRNA complement(join(10423373..10423736,10424991..10425085, FT 10426330..10426409)) FT /locus_tag="RP1-290I10.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BE552449" FT mRNA join(10434549..10434637,10452136..10452480) FT /locus_tag="RP1-290I10.7-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AV760024" FT mRNA join(10434562..10434637,10452136..10452289, FT 10452981..10453060,10456669..10457014) FT /locus_tag="RP1-290I10.7-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG576820" FT misc_feature 10441747 FT /note="Clone_left_end: RP11-360O19" FT misc_feature 10441751 FT /note="Clone_left_end: RP11-360O19" FT CDS complement(10460139..10460774) FT /pseudo FT /locus_tag="RP1-290I10.4-001" FT /product="MRPL48 (mitochondrial ribosomal protein L48) FT pseudogene" FT /note="match: proteins: Tr:Q8JZS9 Tr:Q96GC5 Tr:Q9Y5J0" FT /db_xref="PSEUDO:CAC38372.1" FT mRNA complement(join(10474733..10474826,10478574..10478735)) FT /locus_tag="RP1-290I10.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL043857" FT misc_feature 10487349 FT /note="Clone_right_end: RP1-290I10" FT misc_feature 10489350..10576886 FT /note="annotated region of clone" FT mRNA join(10492456..10492627,10493053..10493164, FT 10509320..10509391,AL358777.12:44798..44890, FT AL358777.12:49864..50669) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-010" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK307337.1" FT /note="match: ESTs: Em:DB098275.1" FT mRNA join(10492457..10492627,10493053..10493164, FT AL358777.12:44798..44890,AL358777.12:49864..50419) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-009" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK307329.1" FT /note="match: ESTs: Em:CN393759.1 Em:DB080087.1 FT Em:DB080950.1" FT mRNA join(10492459..10492627,10493053..10493164, FT 10527707..10527893,10528864..10528940) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-015" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:DB068763.1 Em:DB084901.1" FT CDS join(10509325..10509391,AL358777.12:44798..44890, FT AL358777.12:49864..50054) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-010" FT /standard_name="OTTHUMP00000202522" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /protein_id="CAX14976.1" FT /translation="MEGKIFGSSFLCPTRCDQLLLPGVPGSMPNASWTGNLRAIKWSDM FT EDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLN FT QSETAIQPSWYF" FT mRNA complement(join(10511269..10511528,10513565..10514779)) FT /locus_tag="RP11-360O19.4-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC014487.1" FT CDS <10514515..10515206 FT /pseudo FT /locus_tag="RP11-360O19.1-001" FT /product="glucosaminyl (N-acetyl) transferase 1, core 2 FT (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1) FT pseudogene" FT /note="match: proteins: Sw:Q09324 Tr:Q19729 Tr:Q64165" FT mRNA join(10521516..10521650,10527707..10527893, FT 10528864..10529074,10529329..10529342) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-011" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:DA437975.1" FT mRNA join(10521542..10521650,10527707..10527893, FT 10528864..10530500) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-007" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK310216.1" FT /note="match: ESTs: Em:DA460425.1 Em:DA863128.1" FT mRNA join(10521565..10521650,10527707..10527893, FT 10528864..10529074,AL358777.12:44798..44890, FT AL358777.12:49864..>52814) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-002" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK307373.1" FT /note="match: ESTs: Em:BX474916.1 Em:DB238695.1" FT mRNA join(10521584..10521650,10527707..10527893, FT AL358777.12:44798..44890,AL358777.12:49864..50063) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-012" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:DB217013.1" FT mRNA join(10521584..10521650,10527707..10527893, FT 10528864..10530069,AL358777.12:44798..44890, FT AL358777.12:49864..50524) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-006" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK291767.1" FT mRNA join(10521653..10521827,AL358777.12:44798..44890, FT AL358777.12:49864..>50004) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-013" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:AL691873.1" FT mRNA join(10521718..10521827,10527707..10527893, FT 10528864..10529074,AL358777.12:44798..44869) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-014" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:DB234266.1" FT mRNA join(10527599..10527893,10528864..10530183) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-008" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:CR624014.1" FT /note="match: ESTs: Em:AL553044.3" FT mRNA join(10528589..10530069,AL358777.12:44798..44890, FT AL358777.12:49864..52814) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-003" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK090483.1 Em:AY435145.1 FT Em:CR859679.1" FT /note="match: ESTs: Em:CN401055.1 Em:DA880508.1 FT Em:DB198703.1" FT CDS join(10529145..10530069,AL358777.12:44798..44890, FT AL358777.12:49864..50054) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-006" FT /standard_name="OTTHUMP00000016015" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /protein_id="CAQ52588.1" FT /translation="MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLL FT AEACHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIH FT KDFGTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGG FT ISRLQADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPP FT DHAVGRTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQ FT LALDLLSWSKDTYSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHG FT HYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPS FT WYF" FT mRNA join(10530030..10530069,AL358777.12:42652..43078, FT AL358777.12:44798..44890,AL358777.12:49864..49911) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-017" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:BX497572.1" FT mRNA join(10530045..10530069,AL358777.12:44798..45092) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-018" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:BI002241.1" FT mRNA join(10556240..10557575,AL358777.12:44798..44890, FT AL358777.12:49864..52815) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-001" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AB037597.1 Em:AF401652.1 FT Em:AF401653.1 Em:AF458025.1 Em:AK291195.1 Em:AK313903.1 FT Em:AY435146.1 Em:BC074801.2 Em:BC074802.2 Em:L19659.1 FT Em:Z19550.1" FT /note="match: ESTs: Em:AA633484.1 Em:AI207198.1 FT Em:AI435137.1 Em:AI654230.1 Em:DA741262.1 Em:DA769601.1" FT CDS join(10556657..10557575,AL358777.12:44798..44890, FT AL358777.12:49864..50054) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-001" FT /standard_name="OTTHUMP00000016021" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: proteins: Sw:Q06430.1" FT /protein_id="CAH73010.1" FT /translation="MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLT FT QVCTSFINGKTRFLWKNKLMIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHH FT FDTFARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGIS FT RLQADLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAH FT AIGRTKYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRA FT VDLLQWSKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHY FT VHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWY FT F" FT mRNA join(10557034..10557575,AL358777.12:42652..42888) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-016" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:BI766041.1" FT CDS complement(10574982..10575460) FT /pseudo FT /locus_tag="RP11-360O19.5-001" FT /product="ribosomal protein L21 (RPL21) pseudogene" FT /note="match: proteins: Sw:O09167 Sw:P34334 Sw:P46778 FT Sw:P49667 Sw:Q02753 Sw:Q12672 Sw:Q43291 Tr:Q9V9M7 FT Tr:Q9ZSU8" FT misc_feature 10576688 FT /note="Clone_left_end: RP11-421M1" FT misc_feature 10576887..10732145 FT /note="annotated region of clone" FT mRNA join(AL139039.17:3206..3377,AL139039.17:3803..3914, FT AL139039.17:20070..20141,10621584..10621676, FT 10626650..10627455) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-010" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK307337.1" FT /note="match: ESTs: Em:DB098275.1" FT mRNA join(AL139039.17:3207..3377,AL139039.17:3803..3914, FT 10621584..10621676,10626650..10627205) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-009" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK307329.1" FT /note="match: ESTs: Em:CN393759.1 Em:DB080087.1 FT Em:DB080950.1" FT mRNA join(10585979..10587147,10621584..10621676, FT 10626650..10629601) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-004" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:DA741262.1 Em:DA769601.1" FT /note="match: cDNAs: Em:AF458026.1 Em:AK313426.1 FT Em:AL832719.1 Em:AY435147.1 Em:BC130524.1 Em:BX647576.1 FT Em:BX647668.1" FT CDS join(10586223..10587147,10621584..10621676, FT 10626650..10626840) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-004" FT /standard_name="OTTHUMP00000016018" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /protein_id="CAI13997.2" FT /translation="MNFWRYCFFAFTLLSVVIFVRFYSSQLSPPKSYEKLNSSSERYFR FT KTACNHALEKMPVFLWENILPSPLRSVPCKDYLTQNHYITSPLSEEEAAFPLAYVMVIH FT KDFDTFERLFRAIYMPQNVYCVHVDEKAPAEYKESVRQLLSCFQNAFIASKTESVVYAG FT ISRLQADLNCLKDLVASEVPWKYVINTCGQDFPLKTNREIVQHLKGFKGKNITPGVLPP FT DHAIKRTKYVHQEHTDKGGFFVKNTNILKTSPPHQLTIYFGTAYVALTRDFVDFVLRDQ FT RAIDLLQWSKDTYSPDEHFWVTLNRVSGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHG FT HYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPS FT WYF" FT mRNA join(10587108..10587147,10619438..10619864, FT 10621584..10621676,10626650..10626697) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-005" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:BX497572.1" FT CDS join(AL139039.17:20075..20141,10621584..10621676, FT 10626650..10626840) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-010" FT /standard_name="OTTHUMP00000202522" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /protein_id="CAX15038.1" FT /translation="MEGKIFGSSFLCPTRCDQLLLPGVPGSMPNASWTGNLRAIKWSDM FT EDRHGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLN FT QSETAIQPSWYF" FT mRNA join(AL139039.17:32315..32400,AL139039.17:38457..38643, FT AL139039.17:39614..39824,10621584..10621676, FT 10626650..>10629600) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-002" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK307373.1" FT /note="match: ESTs: Em:BX474916.1 Em:DB238695.1" FT mRNA join(AL139039.17:32334..32400,AL139039.17:38457..38643, FT 10621584..10621676,10626650..10626849) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-012" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:DB217013.1" FT mRNA join(AL139039.17:32334..32400,AL139039.17:38457..38643, FT AL139039.17:39614..40819,10621584..10621676, FT 10626650..10627310) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-006" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK291767.1" FT mRNA join(AL139039.17:32403..32577,10621584..10621676, FT 10626650..>10626790) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-013" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:AL691873.1" FT mRNA join(AL139039.17:32468..32577,AL139039.17:38457..38643, FT AL139039.17:39614..39824,10621584..10621655) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-014" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:DB234266.1" FT mRNA join(AL139039.17:39339..40819,10621584..10621676, FT 10626650..10629600) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-003" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AK090483.1 Em:AY435145.1 FT Em:CR859679.1" FT /note="match: ESTs: Em:CN401055.1 Em:DA880508.1 FT Em:DB198703.1" FT CDS join(AL139039.17:39895..40819,10621584..10621676, FT 10626650..10626840) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-006" FT /standard_name="OTTHUMP00000016015" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /protein_id="CAQ52597.1" FT /translation="MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASLL FT AEACHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVTIH FT KDFGTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVVYGG FT ISRLQADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPGVLPP FT DHAVGRTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANFVLQDQ FT LALDLLSWSKDTYSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHG FT HYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPS FT WYF" FT mRNA join(AL139039.17:40780..40819,10619438..10619864, FT 10621584..10621676,10626650..10626697) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-017" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:BX497572.1" FT mRNA join(AL139039.17:40795..40819,10621584..10621878) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-018" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:BI002241.1" FT polyA_signal 10629578..10629583 FT polyA_site 10629600 FT polyA_site 10629601 FT mRNA <10634158..>10634922 FT /locus_tag="RP11-421M1.3-001" FT /product="novel protein similar to glucosaminyl (N-acetyl) FT transferase 2, I-branching enzyme GCNT2" FT CDS <10634158..>10634922 FT /codon_start=1 FT /locus_tag="RP11-421M1.3-001" FT /standard_name="OTTHUMP00000016020" FT /product="novel protein similar to glucosaminyl (N-acetyl) FT transferase 2, I-branching enzyme GCNT2" FT /note="match: proteins: Sw:P97402 Sw:Q06430 Tr:Q8WXK6 FT Tr:Q8WXK7" FT /protein_id="CAI13998.1" FT /translation="NGKTVQVLPSALSTMFGIDSCPYYVLENHYITTPLSTEEAAFPLA FT YVMTISQDFDTFEWLFWAIYMPQNVYCIHVDKAATIDFKIAVSELLECFSNAFISSQSE FT YIIYGGKSRLQADLACMRDLIASTVQWRYVTNTGDHDFPLKTNREIVQYLKTMNWTNIT FT PNLVSVLKSTERIKYTHREYRTRAHAFVLKKHKKKSPPPRQLKIHFGSSYVALTREFVH FT FALYNKIAIELLQRSQDTYSPDKHFWITLNNIP" FT misc_feature 10643074 FT /note="Clone_right_end: RP11-360O19" FT mRNA join(AL139039.17:66990..68325,10621584..10621676, FT 10626650..10629601) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-001" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: cDNAs: Em:AB037597.1 Em:AF401652.1 FT Em:AF401653.1 Em:AF458025.1 Em:AK291195.1 Em:AK313903.1 FT Em:AY435146.1 Em:BC074801.2 Em:BC074802.2 Em:L19659.1 FT Em:Z19550.1" FT /note="match: ESTs: Em:AA633484.1 Em:AI207198.1 FT Em:AI435137.1 Em:AI654230.1 Em:DA741262.1 Em:DA769601.1" FT CDS join(AL139039.17:67407..68325,10621584..10621676, FT 10626650..10626840) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-001" FT /standard_name="OTTHUMP00000016021" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: proteins: Sw:Q06430.1" FT /protein_id="CAI13999.1" FT /translation="MPLSMRYLFIISVSSVIIFIVFSVFNFGGDPSFQRLNISDPLRLT FT QVCTSFINGKTRFLWKNKLMIHEKSSCKEYLTQSHYITAPLSKEEADFPLAYIMVIHHH FT FDTFARLFRAIYMPQNIYCVHVDEKATTEFKDAVEQLLSCFPNAFLASKMEPVVYGGIS FT RLQADLNCIRDLSAFEVSWKYVINTCGQDFPLKTNKEIVQYLKGFKGKNITPGVLPPAH FT AIGRTKYVHQEHLGKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLHDPRA FT VDLLQWSKDTFSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDRHGGCHGHY FT VHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQSETAIQPSWY FT F" FT mRNA join(AL139039.17:67784..68325,10619438..10619674) FT /gene="GCNT2" FT /locus_tag="RP11-421M1.2-016" FT /product="glucosaminyl (N-acetyl) transferase 2, FT I-branching enzyme (I blood group)" FT /note="match: ESTs: Em:BI766041.1" FT polyA_site complement(10671655) FT polyA_signal complement(10671671..10671676) FT CDS complement(join(10671689..10671831,10683420..10683465, FT 10687199..10687207)) FT /gene="C6orf52" FT /locus_tag="RP11-421M1.7-001" FT /standard_name="OTTHUMP00000016016" FT /product="chromosome 6 open reading frame 52" FT /note="match: proteins: Tr:Q96AS6" FT /protein_id="CAI14000.1" FT /translation="MPKETTPLAENQDEDPLEDPHLHLNIEESNQEFMVKSEELYDSLM FT NCHWQPLDTVHSEIPDETPK" FT mRNA complement(join(10671655..10671831,10683420..10683465, FT 10685082..10685156,10687199..10687372)) FT /gene="C6orf52" FT /locus_tag="RP11-421M1.7-004" FT /product="chromosome 6 open reading frame 52" FT /note="match: ESTs: Em:AI299086 Em:AI492917 Em:AI621292 FT Em:AW001000 Em:AW207788 Em:AW771859 Em:BE670432" FT mRNA complement(join(10671655..10671831,10683420..10683465, FT 10687199..10687397,10687713..>10687773)) FT /gene="C6orf52" FT /locus_tag="RP11-421M1.7-002" FT /product="chromosome 6 open reading frame 52" FT /note="match: ESTs: Em:AI743034 Em:AI809192" FT CDS complement(join(10671689..10671831,10683420..10683465, FT 10687199..10687397,10687713..>10687773)) FT /codon_start=3 FT /gene="C6orf52" FT /locus_tag="RP11-421M1.7-002" FT /standard_name="OTTHUMP00000016017" FT /product="chromosome 6 open reading frame 52" FT /protein_id="CAI14001.1" FT /translation="ESSADFGIAQQNNYYCYWQSLPSAIRVKQEFQPSQSYRYGNWYAR FT QHGSYLLSGYSYGCAVDGNGKDCFSAHETPEHTAGTLVMPKETTPLAENQDEDPLEDPH FT LHLNIEESNQEFMVKSEELYDSLMNCHWQPLDTVHSEIPDETPK" FT mRNA complement(join(10671655..10671831,10683420..10683465, FT 10687713..10687794)) FT /gene="C6orf52" FT /locus_tag="RP11-421M1.7-003" FT /product="chromosome 6 open reading frame 52" FT /note="match: ESTs: Em:AI376550" FT mRNA complement(join(10671655..10671831,10683420..10683465, FT 10687199..10687289,10694727..10694842)) FT /gene="C6orf52" FT /locus_tag="RP11-421M1.7-001" FT /product="chromosome 6 open reading frame 52" FT /note="match: ESTs: Em:AA026303 Em:BF209482" FT /note="match: cDNAs: Em:BC016820.1" FT mRNA join(10694928..10695302,10697557..10697719, FT 10702602..10702722,10702798..10702872,10703638..10703690, FT 10704740..10704885,10704980..10705077,10707648..10707747, FT 10709186..10709309,10709471..10710015) FT /gene="RP11-421M1.5" FT /locus_tag="RP11-421M1.5-001" FT /product="PAK/PLC-interacting protein 1" FT /note="match: ESTs: Em:AA640001 Em:AI024461 Em:AI697314 FT Em:AV602999 Em:BE296228 Em:BG206643 Em:BI761724 Em:R42266" FT /note="match: cDNAs: Em:AF283303.1 Em:AF386076.1 FT Em:AK000631.1 Em:AK002852.1 Em:AY030406.1 Em:BC010907.1 FT Em:BC018522.1" FT CDS join(10695219..10695302,10697557..10697719, FT 10702602..10702722,10702798..10702872,10703638..10703690, FT 10704740..10704885,10704980..10705077,10707648..10707747, FT 10709186..10709309,10709471..10709685) FT /gene="RP11-421M1.5" FT /locus_tag="RP11-421M1.5-001" FT /standard_name="OTTHUMP00000016022" FT /product="PAK/PLC-interacting protein 1" FT /note="match: proteins: Sw:Q9DCE5 Sw:Q9NWT1" FT /protein_id="CAI14002.1" FT /translation="MELVAGCYEQVLFGFAVHPEPEACGDHEQWTLVADFTHHAHTASL FT SAVAVNSRFVVTGSKDETIHIYDMKKKIEHGALVHHSGTITCLKFYGNRHLISGAEDGL FT ICIWDAKKWECLKSIKAHKGQVTFLSIHPSGKLALSVGTDKTLRTWNLVEGRSAFIKNI FT KQNAHIVEWSPRGEQYVVIIQNKIDIYQLDTASISGTITNEKRISSVKFLSESVLAVAG FT DEEVIRFFDCDSLVCLCEFKAHENRVKDMFSFEIPEHHVIVSASSDGFIKMWKLKQDKK FT VPPSLLCEINTNARLTCLGVWLDKVADMKESLPPAAEPSPVSKEQSKIGKKEPGDTVHK FT EEKRSKPNTKKRGLTGDSKKATKESGLISTKKRKMVEMLEKKRKKKKIKTMQ" FT polyA_signal 10709953..10709958 FT polyA_site 10710015 FT mRNA join(10723208..10723474,10724803..10724866, FT 10725194..10725270,10726140..10726241,10728873..10728960, FT 10730848..10731362) FT /gene="TMEM14C" FT /locus_tag="RP11-421M1.6-001" FT /product="transmembrane protein 14C" FT /note="match: ESTs: Em:AA127810 Em:AL519895 Em:AL527781 FT Em:AL561106 Em:AV725874 Em:AW239079 Em:BE390815 Em:BE732828 FT Em:BF725812 Em:BG396810 Em:BI838112 Em:R20300" FT /note="match: cDNAs: Em:AF151028.1 Em:BC002496.1" FT mRNA join(10723342..10723474,10726140..10726241, FT 10728873..10728960,10730848..10730996) FT /gene="TMEM14C" FT /locus_tag="RP11-421M1.6-003" FT /product="transmembrane protein 14C" FT /note="match: ESTs: Em:N42142 Em:N43927" FT mRNA join(10723358..10723474,10725194..10725270, FT 10726140..10726241,10728873..10728960,10730848..10731362) FT /gene="TMEM14C" FT /locus_tag="RP11-421M1.6-002" FT /product="transmembrane protein 14C" FT /note="match: ESTs: Em:BE728826" FT mRNA join(10724655..10724866,10725194..10725270, FT 10726140..10726241,10728873..10728960) FT /gene="TMEM14C" FT /locus_tag="RP11-421M1.6-004" FT /product="transmembrane protein 14C" FT /note="match: ESTs: Em:BG483497" FT CDS join(10724847..10724866,10725194..10725270, FT 10726140..10726241,10728873..10728960,10730848..10730899) FT /gene="TMEM14C" FT /locus_tag="RP11-421M1.6-001" FT /standard_name="OTTHUMP00000016019" FT /product="transmembrane protein 14C" FT /note="match: proteins: Sw:P56982 Sw:P56983 Sw:P56984 FT Sw:Q924P2 Sw:Q9CQN6 Sw:Q9NUH8 Sw:Q9P0S9 Sw:Q9W1K0 Sw:Q9Y6G1 FT Tr:Q9CYF4" FT /protein_id="CAI14003.1" FT /translation="MQDTGSVVPLHWFGFGYAALVASGGIIGYVKAGSVPSLAAGLLFG FT SLAGLGAYQLSQDPRNVWVFLATSGTLAGIMGMRFYHSGKFMPAGLIAGASLLMVAKVG FT VSMFNRPH" FT misc_feature 10731946 FT /note="Clone_left_end: RP3-417M14" FT misc_feature 10732146..10876234 FT /note="annotated region of clone" FT mRNA complement(join(10873456..10875166,10876124..10876234, FT AL357497.17:101..115,AL357497.17:544..656, FT AL357497.17:1239..1491,AL357497.17:5803..6040)) FT /gene="GCM2" FT /locus_tag="RP3-417M14.3-001" FT /product="glial cells missing homolog 2 (Drosophila)" FT /note="match: ESTs: Em:AA782779 Em:AA860827 Em:AI051443 FT Em:AI167675 Em:BF055021" FT /note="match: cDNAs: Em:AA772631 Em:AA782779 Em:AA845533 FT Em:AF079550 Em:AF081556.1 Em:AF091149 Em:AI034434 FT Em:D88611.1 Em:W16423" FT CDS complement(join(10874228..10875166,10876124..10876234, FT AL357497.17:101..115,AL357497.17:544..656, FT AL357497.17:1239..1491,AL357497.17:5803..5892)) FT /gene="GCM2" FT /locus_tag="RP3-417M14.3-001" FT /standard_name="OTTHUMP00000016026" FT /product="glial cells missing homolog 2 (Drosophila)" FT /note="match: proteins: Sw:O09102 Sw:O09102 Sw:O09102 FT Sw:O75603" FT /protein_id="CAI20518.1" FT /translation="MPAAAVQEAVGVCSYGMQLSWDINDPQMPQELALFDQFREWPDGY FT VRFIYSSDEKKAQRHLSGWAMRNTNNHNGHILKKSCLGVVVCTQACTLPDGSRLQLRPA FT ICDKARLKQQKKACPNCHSALELIPCRGHSGYPVTNFWRLDGNAIFFQAKGVHDHPRPE FT SKSETEARRSAIKRQMASFYQPQKKRIRESEAEENQDSSGHFSNIPPLENPEDFDIVTE FT TSFPIPGQPCPSFPKSDVYKATCDLATFQGDKMPPFQKYSSPRIYLPRPPCSYELANPG FT YTNSSPYPTLYKDSTSIPNDTDWVHLNTLQCNVNSYSSYERSFDFTNKQHGWKPALGKP FT SLVERTNHGQFQAMATRPYYNPELPCRYLTTPPPGAPALQTVITTTTKVSYQAYQPPAM FT KYSDSVREVKSLSSCNYAPEDTGMSVYPEPWGPPVTVTRAASPSGPPPMKIAGDCRAIR FT PTVAIPHEPVSSRTDEAETWDVCLSGLGSAVSYSDRVGPFFTYNNEDF" FT misc_feature 10739470..10739711 FT /note="Single clone region. short insert library" FT mRNA join(10747953..10748114,10749435..10749501, FT 10749855..10749931,10751366..10751467,10755375..10755465, FT 10756700..10757214) FT /locus_tag="RP3-417M14.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:BE739508 Em:BE904995 Em:BE961088 FT Em:BF028243 Em:BF691779 Em:BF726887 Em:BF972946 Em:BG432075 FT Em:BG483916 Em:BG823904 Em:BI552632 Em:BI597759 Em:BI753272 FT Em:BI830613" FT /note="match: cDNAs: Em:BC001033.1 Em:BC007080.1 FT Em:BC013913.1" FT mRNA join(10747953..10748124,10749435..10749501, FT 10749855..10749931,10751366..10751467,10755375..10755465, FT 10756700..10757214) FT /locus_tag="RP3-417M14.1-005" FT /product="novel protein" FT /note="match: ESTs: Em:AL527780 Em:AL561106 Em:AW160399 FT Em:BE387517 Em:BE390815 Em:BE513040 Em:BE563797 Em:BE732828 FT Em:BF176359 Em:BF239121 Em:BF725812 Em:BG681183 Em:BG750959 FT Em:BI551230 Em:BI553445 Em:BI838112 Em:BI862483 Em:BI906388 FT Em:BM016434" FT /note="match: cDNAs: Em:AF151028.1 Em:BC002496.1 FT Em:BC010086.1" FT mRNA join(10748006..10748114,10749855..10749931, FT 10751366..10751467,10755375..10755465,10756700..10756751) FT /locus_tag="RP3-417M14.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:BE728826" FT mRNA join(10748006..10748118,10751366..10751467, FT 10755375..10755465,10756700..10756848) FT /locus_tag="RP3-417M14.1-003" FT /product="novel protein" FT /note="match: ESTs: Em:N42142" FT mRNA join(10748044..10748114,10749435..10749501, FT 10749855..10749931,10755375..10755465,10756700..10757214) FT /locus_tag="RP3-417M14.1-004" FT /product="novel protein" FT /note="match: ESTs: Em:BE537266 Em:BE894109 Em:BF182781 FT Em:BF243942 Em:BG122184 Em:BG483916" FT CDS join(10749479..10749501,10749855..10749931, FT 10751366..10751467,10755375..10755465,10756700..10756751) FT /locus_tag="RP3-417M14.1-001" FT /standard_name="OTTHUMP00000016023" FT /product="novel protein" FT /note="match: proteins: Sw:Q9CQN6 Sw:Q9CQN6 Sw:Q9NUH8 FT Sw:Q9NUH8 Sw:Q9P0S9 Tr:Q934Z3" FT /protein_id="CAB75822.1" FT /translation="MEKPLFPLVPLHWFGFGYTALVVSGGIVGYVKTGSVPSLAAGLLF FT GSLAGLGAYQLYQDPRNVWGFLAATSVTFVGVMGMRSYYYGKFMPVGLIAGASLLMAAK FT VGVRMLMTSD" FT CDS join(10749479..10749501,10749855..10749931, FT 10755375..10755465,10756700..10756751) FT /locus_tag="RP3-417M14.1-004" FT /standard_name="OTTHUMP00000016024" FT /product="novel protein" FT /protein_id="CAI20519.1" FT /translation="MEKPLFPLVPLHWFGFGYTALVVSGGIVGYVKTAATSVTFVGVMG FT MRSYYYGKFMPVGLIAGASLLMAAKVGVRMLMTSD" FT polyA_signal 10757192..10757197 FT polyA_site 10757212 FT polyA_site 10757214 FT CDS complement(join(10764685..10764839,10770344..10770463, FT 10775561..10775692,10784657..10784805,10791908..10792080, FT 10796231..10796542,10802125..10802292,10803953..10804124, FT 10809043..10809175,10813877..10813956,10818083..10818204, FT 10819119..10819173,10830781..10830881)) FT /locus_tag="RP3-417M14.2-001" FT /standard_name="OTTHUMP00000016025" FT /product="novel serine/threonine-protein kinase (possible FT ortholog of rodent MAK (male germ cell-associated kinase))" FT /note="match: proteins: Em:CE12408 Sw:O55076 Sw:P13863 FT Sw:P20793 Sw:P43294 Sw:P97377 Sw:Q04859 Sw:Q62726 Sw:Q9UPZ9 FT Tr:O49669" FT /protein_id="CAB75823.1" FT /translation="MNRYTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDEC FT MNLREVKSLKKLNHANVIKLKEVIRENDHLYFIFEYMKENLYQLMKDRNKLFPESVIRN FT IMYQILQGLAFIHKHGFFHRDMKPENLLCMGPELVKIADFGLARELRSQPPYTDYVSTR FT WYRAPEVLLRSSVYSSPIDVWAVGSIMAELYMLRPLFPGTSEVDEIFKICQVLGTPKKS FT DWPEGYQLASSMNFRFPQCVPINLKTLIPNASNEAIQLMTEMLNWDPKKRPTASQALKH FT PYFQVGQVLGPSSNHLESKQSLNKQLQPLESKPSLVEVEPKPLPDIIDQVVGQPQPKTS FT QQPLQPIQPPQNLSVQQPPKQQSQEKPPQTLFPSIVKNMPTKPNGTLSHKSGRRRWGQT FT IFKSGDSWEELEDYDFGASHSKKPSMGVFKEKRKKDSPFRLPEPVPSGSNHSTGENKSL FT PAVTSLKSDSELSTAPTSKQYYLKQSRYLPGVNPKKVSLIASGKEINPHTWSNQLFPKS FT LGPVGAELAFKRSNAGNLGSYATYNQSGYIPSFLKKEVQSAGQRIHLAPLNATASEYTW FT NTKTGRGQFSGRTYNPTAKNLNIVNRAQPIPSVHGRTDWVAKYGGHR" FT mRNA complement(join(10762956..10764839,10770344..10770463, FT 10775561..10775692,10784657..10784805,10791908..10792080, FT 10796231..10796542,10802125..10802292,10803953..10804124, FT 10809043..10809175,10813877..10813956,10818083..10818204, FT 10819119..10819173,10830781..10831110,10838575..10838728)) FT /locus_tag="RP3-417M14.2-001" FT /product="novel serine/threonine-protein kinase (possible FT ortholog of rodent MAK (male germ cell-associated kinase))" FT /note="match: ESTs: Em:AA058851 Em:AA059465 Em:AA931848 FT Em:AI202809 Em:AW103841 Em:AW294808 Em:BB615474 Em:BB616252 FT Em:BB642339 Em:BB642816 Em:BF075355 Em:BF739965 Em:BG483916 FT Em:BG718521 Em:BI458728 Em:BI832042 Em:H03161" FT /note="match: cDNAs: Em:AF225918.1 Em:D26178.1 Em:M35862.1 FT Em:X66983.1" FT mRNA complement(join(10762956..10764839,10770344..10770463, FT 10775561..10775692,10784657..10784805,10791908..10792080, FT 10796231..10796542,10802125..10802292,10803953..10804124, FT 10809043..10809175,10813877..10813956,10818083..10818204, FT 10819119..10819173,10830781..10831110,10838736..10838764)) FT /locus_tag="RP3-417M14.2-002" FT /product="novel serine/threonine-protein kinase (possible FT ortholog of rodent MAK (male germ cell-associated kinase))" FT /note="match: ESTs: Em:BB615474 Em:BB616252 Em:BG718521" FT polyA_site complement(10873456) FT polyA_signal complement(10873474..10873479) FT misc_feature 10876134 FT /note="Clone_right_end: RP3-417M14" FT misc_feature 10876235..10959086 FT /note="annotated region of clone" FT mRNA complement(join(AL024498.13:141411..143121, FT AL024498.13:144079..144189,10876235..10876249, FT 10876678..10876790,10877373..10877625,10881937..10882174)) FT /gene="GCM2" FT /locus_tag="RP3-417M14.3-001" FT /product="glial cells missing homolog 2 (Drosophila)" FT /note="match: ESTs: Em:AA782779 Em:AA860827 Em:AI051443 FT Em:AI167675 Em:BF055021" FT /note="match: cDNAs: Em:AA772631 Em:AA782779 Em:AA845533 FT Em:AF079550 Em:AF081556.1 Em:AF091149 Em:AI034434 FT Em:D88611.1 Em:W16423" FT CDS complement(join(AL024498.13:142183..143121, FT AL024498.13:144079..144189,10876235..10876249, FT 10876678..10876790,10877373..10877625,10881937..10882026)) FT /gene="GCM2" FT /locus_tag="RP3-417M14.3-001" FT /standard_name="OTTHUMP00000016026" FT /product="glial cells missing homolog 2 (Drosophila)" FT /note="match: proteins: Sw:O09102 Sw:O09102 Sw:O09102 FT Sw:O75603" FT /protein_id="CAI16225.1" FT /translation="MPAAAVQEAVGVCSYGMQLSWDINDPQMPQELALFDQFREWPDGY FT VRFIYSSDEKKAQRHLSGWAMRNTNNHNGHILKKSCLGVVVCTQACTLPDGSRLQLRPA FT ICDKARLKQQKKACPNCHSALELIPCRGHSGYPVTNFWRLDGNAIFFQAKGVHDHPRPE FT SKSETEARRSAIKRQMASFYQPQKKRIRESEAEENQDSSGHFSNIPPLENPEDFDIVTE FT TSFPIPGQPCPSFPKSDVYKATCDLATFQGDKMPPFQKYSSPRIYLPRPPCSYELANPG FT YTNSSPYPTLYKDSTSIPNDTDWVHLNTLQCNVNSYSSYERSFDFTNKQHGWKPALGKP FT SLVERTNHGQFQAMATRPYYNPELPCRYLTTPPPGAPALQTVITTTTKVSYQAYQPPAM FT KYSDSVREVKSLSSCNYAPEDTGMSVYPEPWGPPVTVTRAASPSGPPPMKIAGDCRAIR FT PTVAIPHEPVSSRTDEAETWDVCLSGLGSAVSYSDRVGPFFTYNNEDF" FT mRNA join(10882013..10882087,10882553..10882650, FT 10884089..10884447) FT /locus_tag="RP11-637O19.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA845538 Em:AA890229" FT mRNA join(10887064..10887368,10891746..10891814, FT 10894100..10894237,10894318..10894441,10898248..10898348, FT 10899057..10899081,10902910..10902995,10903108..10903196, FT 10906253..10906287,10907775..10907917,10910381..10910433, FT 10912906..10912998,10913100..10913160,10922924..10923023, FT 10924729..10924874,10926572..10926665,10927473..10927600, FT 10928636..10928683,10930603..10930747,10931673..10931722, FT 10935291..10935420,10942692..10942762,10942910..10942979, FT 10955349..10955450,10956369..10956475,10959017..10959086, FT AL121955.20:101..122,AL121955.20:2552..2651, FT AL121955.20:2747..2805,AL121955.20:5029..5090, FT AL121955.20:15199..15545) FT /locus_tag="RP1-62D2.1-002" FT /product="novel protein similar to synaptonemal complex FT protein 2 (SYCP2)" FT /note="match: cDNAs: Em:BC012225.1" FT CDS join(10887360..10887368,10891746..10891814, FT 10894100..10894237,10894318..10894441,10898248..10898348, FT 10899057..10899081,10902910..10902995,10903108..10903196, FT 10906253..10906287,10907775..10907917,10910381..10910433, FT 10911057..10911102,10912906..10912998,10913100..10913160, FT 10924729..10924874,10926572..10926665,10927473..10927600, FT 10928636..10928683,10930603..10930747,10931673..10931722, FT 10935291..10935420,10942692..10942762,10942910..10942979, FT 10955349..10955450,10956369..10956475,10959017..10959086, FT AL121955.20:101..122,AL121955.20:2552..2651, FT AL121955.20:2747..2805,AL121955.20:5029..5053) FT /locus_tag="RP1-62D2.1-001" FT /standard_name="OTTHUMP00000016027" FT /product="novel protein similar to synaptonemal complex FT protein 2 (SYCP2)" FT /note="match: proteins: Sw:O70608 Sw:Q9BX26 Sw:Q9BX26 FT Sw:Q9BX26 Sw:Q9CUU3 Tr:Q90WN7 Tr:Q96EJ2" FT /protein_id="CAI16226.1" FT /translation="MQAKNKDALQPIKEDRTGKAQDDAFWLQSLITDAFHDKGFQKIKE FT YFQQKESHFPQKYNRLLLYRLDRSINKELDKNEFQSVSLLLKCIQRFLVDGLKEDEPLL FT IRQGLIPKIISWFERTTGILTSEGLASDTSLICVIEDFFDTALIISRSSSEGKIQMLDS FT FLLSLGFLVTEKTVNHLLQQEGLKTFNCILHAVPREERKKFPLSEGMCHLMKDLARTLL FT TVGDYDQQVAISEALCRLTIKKSRDELVHKWFDDEVIAEAFKEIKDREFETDSRRFLNH FT LNNRLGDQRRVYSFPCIAAFADEHEMRKPADEKLEKFWIDFNLGSQSVTFYIDNAENTL FT WDSVTLPKEAVMNFSITETEKIKIFIIYLKKPMIISYKEVMKIEIHFDLQFNISQVSIQ FT ALGEDKQMLPDQTKISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCL FT ITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSEL FT SWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQN FT NTTSPKTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESL FT TESTSLKHKLRNLEDKDIPEGSFAKSQQSRLEEEVAPGSPFSITEERELPEGISTSSLE FT VVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRL FT NKLERFQNLVLQELSSLKQDIQALEHLEKEVLEFWGKQSADLQSFCDLQVLRFNSTQTS FT " FT mRNA join(10887360..10887368,10891746..10891814, FT 10894100..10894237,10894318..10894441,10898248..10898348, FT 10899057..10899081,10902910..10902995,10903108..10903196, FT 10906253..10906287,10907775..10907917,10910381..10910433, FT 10911057..10911102,10912906..10912998,10913100..10913160, FT 10924729..10924874,10926572..10926665,10927473..10927600, FT 10928636..10928683,10930603..10930747,10931673..10931722, FT 10935291..10935420,10942692..10942762,10942910..10942979, FT 10955349..10955450,10956369..10956475,10959017..10959086, FT AL121955.20:101..122,AL121955.20:2552..2651, FT AL121955.20:2747..2805,AL121955.20:5029..5090, FT AL121955.20:15199..15545) FT /locus_tag="RP1-62D2.1-001" FT /product="novel protein similar to synaptonemal complex FT protein 2 (SYCP2)" FT /note="match: ESTs: Em:AA115861 Em:AA854950 Em:AI027433 FT Em:AW183165 Em:AW663048 Em:AW674916 Em:BE541431 Em:BF590345 FT Em:H68821" FT /note="match: cDNAs: Em:AJ249963.2 Em:BC012225.1" FT misc_feature 10916714 FT /note="Clone_left_end: RP1-15M11" FT misc_feature 10958887 FT /note="Clone_left_end: RP1-62D2" FT misc_feature 10959087..11084571 FT /note="annotated region of clone" FT mRNA join(AL357497.17:10930..11234,AL357497.17:15612..15680, FT AL357497.17:17966..18103,AL357497.17:18184..18307, FT AL357497.17:22114..22214,AL357497.17:22923..22947, FT AL357497.17:26776..26861,AL357497.17:26974..27062, FT AL357497.17:30119..30153,AL357497.17:31641..31783, FT AL357497.17:34247..34299,AL357497.17:36772..36864, FT AL357497.17:36966..37026,AL357497.17:46790..46889, FT AL357497.17:48595..48740,AL357497.17:50438..50531, FT AL357497.17:51339..51466,AL357497.17:52502..52549, FT AL357497.17:54469..54613,AL357497.17:55539..55588, FT AL357497.17:59157..59286,AL357497.17:66558..66628, FT AL357497.17:66776..66845,AL357497.17:79215..79316, FT AL357497.17:80235..80341,AL357497.17:82883..82952, FT 10959087..10959108,10961538..10961637,10961733..10961791, FT 10964015..10964076,10974185..10974531) FT /locus_tag="RP1-62D2.1-002" FT /product="novel protein similar to synaptonemal complex FT protein 2 (SYCP2)" FT /note="match: cDNAs: Em:BC012225.1" FT CDS join(AL357497.17:11226..11234,AL357497.17:15612..15680, FT AL357497.17:17966..18103,AL357497.17:18184..18307, FT AL357497.17:22114..22214,AL357497.17:22923..22947, FT AL357497.17:26776..26861,AL357497.17:26974..27062, FT AL357497.17:30119..30153,AL357497.17:31641..31783, FT AL357497.17:34247..34299,AL357497.17:34923..34968, FT AL357497.17:36772..36864,AL357497.17:36966..37026, FT AL357497.17:48595..48740,AL357497.17:50438..50531, FT AL357497.17:51339..51466,AL357497.17:52502..52549, FT AL357497.17:54469..54613,AL357497.17:55539..55588, FT AL357497.17:59157..59286,AL357497.17:66558..66628, FT AL357497.17:66776..66845,AL357497.17:79215..79316, FT AL357497.17:80235..80341,AL357497.17:82883..82952, FT 10959087..10959108,10961538..10961637,10961733..10961791, FT 10964015..10964039) FT /locus_tag="RP1-62D2.1-001" FT /standard_name="OTTHUMP00000016027" FT /product="novel protein similar to synaptonemal complex FT protein 2 (SYCP2)" FT /note="match: proteins: Sw:O70608 Sw:Q9BX26 Sw:Q9BX26 FT Sw:Q9BX26 Sw:Q9CUU3 Tr:Q90WN7 Tr:Q96EJ2" FT /protein_id="CAI22075.1" FT /translation="MQAKNKDALQPIKEDRTGKAQDDAFWLQSLITDAFHDKGFQKIKE FT YFQQKESHFPQKYNRLLLYRLDRSINKELDKNEFQSVSLLLKCIQRFLVDGLKEDEPLL FT IRQGLIPKIISWFERTTGILTSEGLASDTSLICVIEDFFDTALIISRSSSEGKIQMLDS FT FLLSLGFLVTEKTVNHLLQQEGLKTFNCILHAVPREERKKFPLSEGMCHLMKDLARTLL FT TVGDYDQQVAISEALCRLTIKKSRDELVHKWFDDEVIAEAFKEIKDREFETDSRRFLNH FT LNNRLGDQRRVYSFPCIAAFADEHEMRKPADEKLEKFWIDFNLGSQSVTFYIDNAENTL FT WDSVTLPKEAVMNFSITETEKIKIFIIYLKKPMIISYKEVMKIEIHFDLQFNISQVSIQ FT ALGEDKQMLPDQTKISSELFSKSDKEDRESPSGLERETEQAEESTNMVEFMSAEDDRCL FT ITLHLNDQSEPPVIGEPASDSHLQPVPPFGVPDFPQQPKSHYRKHLFSESNQDSSTSEL FT SWTSNQKKKSLKSYSSRKKTRTRSNLRILPVFPPSSGSGHEKDQAKLLSPSEKEIPEQN FT NTTSPKTSEQKFQDSFAFLTAEDSAQKTELQDPHSLSELSSLKHSEDEEKPKIVNQESL FT TESTSLKHKLRNLEDKDIPEGSFAKSQQSRLEEEVAPGSPFSITEERELPEGISTSSLE FT VVPENLNGSAILPTFENFTKKRKRKYELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRL FT NKLERFQNLVLQELSSLKQDIQALEHLEKEVLEFWGKQSADLQSFCDLQVLRFNSTQTS FT " FT mRNA join(AL357497.17:11226..11234,AL357497.17:15612..15680, FT AL357497.17:17966..18103,AL357497.17:18184..18307, FT AL357497.17:22114..22214,AL357497.17:22923..22947, FT AL357497.17:26776..26861,AL357497.17:26974..27062, FT AL357497.17:30119..30153,AL357497.17:31641..31783, FT AL357497.17:34247..34299,AL357497.17:34923..34968, FT AL357497.17:36772..36864,AL357497.17:36966..37026, FT AL357497.17:48595..48740,AL357497.17:50438..50531, FT AL357497.17:51339..51466,AL357497.17:52502..52549, FT AL357497.17:54469..54613,AL357497.17:55539..55588, FT AL357497.17:59157..59286,AL357497.17:66558..66628, FT AL357497.17:66776..66845,AL357497.17:79215..79316, FT AL357497.17:80235..80341,AL357497.17:82883..82952, FT 10959087..10959108,10961538..10961637,10961733..10961791, FT 10964015..10964076,10974185..10974531) FT /locus_tag="RP1-62D2.1-001" FT /product="novel protein similar to synaptonemal complex FT protein 2 (SYCP2)" FT /note="match: ESTs: Em:AA115861 Em:AA854950 Em:AI027433 FT Em:AW183165 Em:AW663048 Em:AW674916 Em:BE541431 Em:BF590345 FT Em:H68821" FT /note="match: cDNAs: Em:AJ249963.2 Em:BC012225.1" FT polyA_signal 10974513..10974518 FT polyA_site 10974532 FT polyA_site complement(10980992) FT polyA_signal complement(10981009..10981014) FT polyA_site complement(10982669) FT polyA_signal complement(10982692..10982697) FT mRNA join(11043993..11044058,11048142..11048232, FT 11049342..11049452,11073688..11073778,11077922..11078299) FT /locus_tag="RP1-62D2.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BI828717" FT mRNA complement(join(10980992..10984139,10989936..10990070, FT 10990551..10990675,10995240..10995411,11000320..11000397, FT 11005605..11005792,11010979..11011042,11044461..11044547)) FT /gene="ELOVL2" FT /locus_tag="RP1-62D2.2-001" FT /product="elongation of very long chain fatty acids FT (FEN1/Elo2, SUR4/Elo3, yeast)-like 2" FT /note="match: ESTs: Em:AI248099 Em:AW082758 Em:BE778035 FT Em:BF366397 Em:BF939922 Em:BI559537 Em:BI598800 Em:BI599451 FT Em:BM083825 Em:H43423 Em:W85765" FT /note="match: cDNAs: Em:AF170908.1 Em:AK000341.1 FT Em:AK014803.1" FT CDS complement(join(10984014..10984139,10989936..10990070, FT 10990551..10990675,10995240..10995411,11000320..11000397, FT 11005605..11005792,11010979..11011042,11044461..11044463)) FT /gene="ELOVL2" FT /locus_tag="RP1-62D2.2-001" FT /standard_name="OTTHUMP00000016029" FT /product="elongation of very long chain fatty acids FT (FEN1/Elo2, SUR4/Elo3, yeast)-like 2" FT /note="match: proteins: Sw:Q9JLJ4 Sw:Q9NXB9 Tr:Q8UVB9 FT Tr:Q920L7" FT /protein_id="CAI22076.1" FT /translation="MEHLKAFDDEINAFLDNMFGPRDSRVRGWFMLDSYLPTFFLTVMY FT LLSIWLGNKYMKNRPALSLRGILTLYNLGITLLSAYMLAELILSTWEGGYNLQCQDLTS FT AGEADIRVAKVLWWYYFSKSVEFLDTIFFVLRKKTSQITFLHVYHHASMFNIWWCVLNW FT IPCGQSFFGPTLNSFIHILMYSYYGLSVFPSMHKYLWWKKYLTQAQLVQFVLTITHTMS FT AVVKPCGFPFGCLIFQSSYMLTLVILFLNFYVQTYRKKPMKKDMQEPPAGKEVKNGFSK FT AYFTAANGVMNKKAQ" FT mRNA join(11044926..11045199,11048142..11048232, FT 11077922..11078459) FT /locus_tag="RP1-62D2.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG699810 Em:BI461881" FT misc_feature 11082472 FT /note="Clone_left_end: RP4-761I2" FT misc_feature 11084572..11204295 FT /note="annotated region of clone" FT mRNA join(11094039..11094164,11094464..11094622, FT 11134636..11135220,11135538..11136044) FT /gene="RP4-761I2.2" FT /locus_tag="RP4-761I2.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA799871 Em:AI278276 Em:AI493198 FT Em:BG182982 Em:BG191356 Em:BG192376 Em:BG203147 Em:BG208769 FT Em:BI909910" FT /note="match: cDNAs: Em:AK058186.1" FT mRNA join(11094266..11094622,11134636..11135244) FT /gene="RP4-761I2.2" FT /locus_tag="RP4-761I2.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BI909910" FT misc_feature 11107053 FT /note="Clone_right_end: RP1-62D2" FT misc_feature 11110700 FT /note="Clone_left_end: RP1-49G10" FT mRNA complement(join(11183531..11185904,11188451..11188540, FT 11190197..11191438,11192578..11192679,11193824..11193925, FT AL139807.6:9319..9765,AL139807.6:28542..28706)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-001" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AA157721 Em:AA486343 Em:AA687921 FT Em:AI084758 Em:AI536885 Em:AL546509 Em:AL554406 Em:AU099532 FT Em:AU132178 Em:AU140787 Em:AU146801 Em:AW363913 Em:AW576255 FT Em:AW953110 Em:BE291990 Em:BE891710 Em:BF038453 Em:BF106378 FT Em:BG176011 Em:BG475441 Em:BG485190 Em:BG541538 Em:BG570023 FT Em:BG570534 Em:BG704686 Em:BG704804 Em:BI658749 Em:BI861396 FT Em:H06471 Em:R17863 Em:T32960 Em:Z38985 Em:Z43516" FT /note="match: cDNAs: Em:AF009366.1 Em:AJ420493.1 FT Em:L43821.1 Em:U64317.1" FT CDS complement(join(11185395..11185904,11188451..11188540, FT 11190197..11191438,11192578..11192679,11193824..11193925, FT AL139807.6:9319..9765,AL139807.6:28542..28553)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-001" FT /standard_name="OTTHUMP00000016030" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: proteins: Sw:O35177 Sw:Q14511 Sw:Q61140 FT Sw:Q63767 Sw:Q64355 Tr:Q9YHC0" FT /protein_id="CAI22676.1" FT /translation="MKYKNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWL FT CSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPRDT FT IYQVPPSYQNQGIYQVPTGHGTQEQEVYQVPPSVQRSIGGTSGPHVGKKVITPVRTGHG FT YVYEYPSRYQKDVYDIPPSHTTQGVYDIPPSSAKGPVFSVPVGEIKPQGVYDIPPTKGV FT YAIPPSACRDEAGLREKDYDFPPPMRQAGRPDLRPEGVYDIPPTCTKPAGKDLHVKYNC FT DIPGAAEPVARRHQSLSPNHPPPQLGQSVGSQNDAYDVPRGVQFLEPPAETSEKANPQE FT RDGVYDVPLHNPPDAKGSRDLVDGINRLSFSSTGSTRSNMSTSSTSSKESSLSASPAQD FT KRLFLDPDTAIERLQRLQQALEMGVSSLMALVTTDWRCYGYMERHINEIRTAVDKVELF FT LKEYLHFVKGAVANAACLPELILHNKMKRELQRVEDSHQILSQTSHDLNECSWSLNILA FT INKPQNKCDDLDRFVMVAKTVPDDAKQLTTTINTNAEALFRPGPGSLHLKNGPESIMNS FT TEYPHGGSQGQLLHPGDHKAQAHNKALPPGLSKEQAPDCSSSDGSERSWMDDYDYVHLQ FT GKEEFERQQKELLEKENIMKQNKMQLEHHQLSQFQLLEQEITKPVENDISKWKPSQSLP FT TTNSGVSAQDRQLLCFYYDQCETHFISLLNAIDALFSCVSSAQPPRIFVAHSKFVILSA FT HKLVFIGDTLTRQVTAQDIRNKVMNSSNQLCEQLKTIVMATKMAALHYPSTTALQEMVH FT QVTDLSRNAQLFKRSLLEMATF" FT mRNA complement(join(11200606..11201279,AL139807.6:9319..9765, FT AL139807.6:28542..28706)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-003" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AA349429 Em:AA369825 Em:AA369826 FT Em:AA370785 Em:AI457601 Em:AI927441 Em:AW957103" FT /note="match: cDNAs: Em:BC020686.1" FT CDS complement(join(11201214..11201279,AL139807.6:9319..9765, FT AL139807.6:28542..28553)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-003" FT /standard_name="OTTHUMP00000016032" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /protein_id="CAI22677.1" FT /translation="MKYKNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWL FT CSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPRDT FT IYQVPPSYQNQGIYQVPTGHGTQEQEVYQVPPSVQRSIGGTSGPHVGKKVFQRDGQVSY FT FLVRASKQTSL" FT polyA_signal 11136021..11136026 FT polyA_site 11136044 FT mRNA 11136696..11138971 FT /gene="RP4-761I2.3" FT /locus_tag="RP4-761I2.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA505692 Em:AA634143 Em:AA724884 FT Em:AA779685 Em:AI376145 Em:AI500395 Em:AI803609 Em:AI870473 FT Em:AW972507 Em:N62183" FT /note="match: cDNAs: Em:AB056329.1 Em:AJ420516.1" FT polyA_signal 11138946..11138951 FT polyA_signal 11138951..11138956 FT polyA_site 11138966 FT polyA_site complement(11183531) FT polyA_signal complement(11183553..11183558) FT polyA_site complement(11200605) FT misc_feature 11202295 FT /note="Clone_right_end: RP4-761I2" FT misc_feature 11204296..11244286 FT /note="annotated region of clone" FT mRNA join(complement(AL512382.12:7533..7732), FT AL022098.1:68552..68715,complement(11213528..11213960)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-002" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AL549950 Em:AW500430" FT mRNA complement(join(AL136139.6:100960..103333, FT AL136139.6:105880..105969,AL136139.6:107626..108867, FT AL136139.6:110007..110108,AL136139.6:111253..111354, FT 11213514..11213960,11232737..11232901)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-001" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AA157721 Em:AA486343 Em:AA687921 FT Em:AI084758 Em:AI536885 Em:AL546509 Em:AL554406 Em:AU099532 FT Em:AU132178 Em:AU140787 Em:AU146801 Em:AW363913 Em:AW576255 FT Em:AW953110 Em:BE291990 Em:BE891710 Em:BF038453 Em:BF106378 FT Em:BG176011 Em:BG475441 Em:BG485190 Em:BG541538 Em:BG570023 FT Em:BG570534 Em:BG704686 Em:BG704804 Em:BI658749 Em:BI861396 FT Em:H06471 Em:R17863 Em:T32960 Em:Z38985 Em:Z43516" FT /note="match: cDNAs: Em:AF009366.1 Em:AJ420493.1 FT Em:L43821.1 Em:U64317.1" FT CDS complement(join(AL136139.6:102824..103333, FT AL136139.6:105880..105969,AL136139.6:107626..108867, FT AL136139.6:110007..110108,AL136139.6:111253..111354, FT 11213514..11213960,11232737..11232748)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-001" FT /standard_name="OTTHUMP00000016030" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: proteins: Sw:O35177 Sw:Q14511 Sw:Q61140 FT Sw:Q63767 Sw:Q64355 Tr:Q9YHC0" FT /protein_id="CAI21579.1" FT /translation="MKYKNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWL FT CSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPRDT FT IYQVPPSYQNQGIYQVPTGHGTQEQEVYQVPPSVQRSIGGTSGPHVGKKVITPVRTGHG FT YVYEYPSRYQKDVYDIPPSHTTQGVYDIPPSSAKGPVFSVPVGEIKPQGVYDIPPTKGV FT YAIPPSACRDEAGLREKDYDFPPPMRQAGRPDLRPEGVYDIPPTCTKPAGKDLHVKYNC FT DIPGAAEPVARRHQSLSPNHPPPQLGQSVGSQNDAYDVPRGVQFLEPPAETSEKANPQE FT RDGVYDVPLHNPPDAKGSRDLVDGINRLSFSSTGSTRSNMSTSSTSSKESSLSASPAQD FT KRLFLDPDTAIERLQRLQQALEMGVSSLMALVTTDWRCYGYMERHINEIRTAVDKVELF FT LKEYLHFVKGAVANAACLPELILHNKMKRELQRVEDSHQILSQTSHDLNECSWSLNILA FT INKPQNKCDDLDRFVMVAKTVPDDAKQLTTTINTNAEALFRPGPGSLHLKNGPESIMNS FT TEYPHGGSQGQLLHPGDHKAQAHNKALPPGLSKEQAPDCSSSDGSERSWMDDYDYVHLQ FT GKEEFERQQKELLEKENIMKQNKMQLEHHQLSQFQLLEQEITKPVENDISKWKPSQSLP FT TTNSGVSAQDRQLLCFYYDQCETHFISLLNAIDALFSCVSSAQPPRIFVAHSKFVILSA FT HKLVFIGDTLTRQVTAQDIRNKVMNSSNQLCEQLKTIVMATKMAALHYPSTTALQEMVH FT QVTDLSRNAQLFKRSLLEMATF" FT mRNA complement(join(AL136139.6:118035..118708, FT 11213514..11213960,11232737..11232901)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-003" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AA349429 Em:AA369825 Em:AA369826 FT Em:AA370785 Em:AI457601 Em:AI927441 Em:AW957103" FT /note="match: cDNAs: Em:BC020686.1" FT CDS complement(join(AL136139.6:118643..118708, FT 11213514..11213960,11232737..11232748)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-003" FT /standard_name="OTTHUMP00000016032" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /protein_id="CAI21580.1" FT /translation="MKYKNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWL FT CSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPRDT FT IYQVPPSYQNQGIYQVPTGHGTQEQEVYQVPPSVQRSIGGTSGPHVGKKVFQRDGQVSY FT FLVRASKQTSL" FT misc_feature 11244087 FT /note="Clone_left_end: RP3-510L9" FT CDS join(AL022098.1:68704..68715, FT complement(<11213528..11213960)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-002" FT /standard_name="OTTHUMP00000016031" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /protein_id="CAI21581.1" FT /translation="MWTRNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWL FT CSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPRDT FT IYQVPPSYQNQGIYQVPTGHGTQEQEVYQVPPSVQRSIGGTSGP" FT misc_feature complement(11244287..11374939) FT /note="annotated region of clone" FT mRNA complement(join(AL139807.6:9333..9765,11306225..11306388, FT AL512382.12:7533..7732)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-002" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AL549950 Em:AW500430" FT mRNA complement(join(11328758..11329108,11334734..11334794, FT AL512382.12:7533..7732)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-004" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AL549950 Em:AW500430 Em:BG484094 FT Em:BI759596 Em:BI832988" FT mRNA complement(join(11305299..11305580,11306225..11306388, FT AL512382.12:7533..7732)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-006" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:BG484094" FT mRNA complement(join(11249166..11249447,11251797..11251959, FT 11306225..11306388,AL512382.12:7533..7732)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-005" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:BI832988" FT CDS complement(join(AL139807.6:<9333..9765,11306225..11306236)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-002" FT /standard_name="OTTHUMP00000016031" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /protein_id="CAI21634.1" FT /translation="MWTRNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWL FT CSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPRDT FT IYQVPPSYQNQGIYQVPTGHGTQEQEVYQVPPSVQRSIGGTSGP" FT misc_feature 11374940..11404873 FT /note="annotated region of clone" FT mRNA join(complement(11382372..11382571), FT AL022098.1:68552..68715,complement(AL139807.6:9333..9765)) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-002" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AL549950 Em:AW500430" FT mRNA join(complement(11382372..11382571), FT AL022098.1:40146..40206,AL022098.1:45832..46182) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-004" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:AL549950 Em:AW500430 Em:BG484094 FT Em:BI759596 Em:BI832988" FT mRNA join(complement(11382372..11382571), FT AL022098.1:68552..68715,AL022098.1:69360..69641) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-006" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:BG484094" FT mRNA join(complement(11382372..11382571), FT AL022098.1:68552..68715,AL022098.1:122981..123143, FT AL022098.1:125493..125774) FT /gene="NEDD9" FT /locus_tag="RP1-49G10.1-005" FT /product="neural precursor cell expressed, developmentally FT down-regulated 9" FT /note="match: ESTs: Em:BI832988" FT misc_feature 11404874..11532735 FT /note="annotated region of clone" FT misc_feature 11404874 FT /note="Clone_left_end: RP11-716O23" FT mRNA join(11417583..11417812,11461518..11461700, FT 11481187..11481472) FT /locus_tag="RP11-716O23.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG700244" FT misc_feature 11427603..11427630 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 11427603..11427659 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 11427632..11427659 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 11427734..11427739 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 11451507..11452624 FT /note="Sequence from overlapping clone RP11-167C17 FT (AL512382). Assembly confirmed by restriction digest" FT misc_feature 11452688..11452735 FT /note="Sequence from overlapping clone RP11-167C17 FT (AL512382). Assembly confirmed by restriction digest" FT misc_feature 11479679 FT /note="Clone_right_end: RP11-167C17" FT mRNA join(11487459..11487576,11487798..11487944, FT 11490546..11490697,11503744..11503896,11515828..11515943) FT /locus_tag="RP11-716O23.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI462434 Em:BI464356" FT misc_feature 11491616..11491825 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 11491647..11491651 FT /note="1327 bases of IS2 transposon (V00610) number) FT removed here. This sequence represents the duplicated FT flanking sequence of the IS2" FT misc_feature 11491826 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 800bp by restriction digest data" FT CDS 11514425..11516699 FT /pseudo FT /locus_tag="RP11-716O23.3-001" FT /product="protein-kinase, interferon-inducible double FT stranded RNA dependent inhibitor, repressor of (P58 FT repressor) (PRKRIR) pseudogene" FT /note="match: proteins: Sw:O43422 Sw:Q9CUX1" FT misc_feature 11530736 FT /note="Clone_left_end: RP11-679B17" FT misc_feature 11532736..11646113 FT /note="annotated region of clone" FT CDS join(11538511..11538607,11565899..11566069, FT 11575664..11575794) FT /gene="TMEM170B" FT /locus_tag="RP11-679B17.1-001" FT /standard_name="OTTHUMP00000016033" FT /product="transmembrane protein 170B" FT /note="match: proteins: Tr:Q8WVE7 Tr:Q9D342" FT /protein_id="CAI16364.1" FT /translation="MKAEGGDHSMINLSVQQVLSLWAHGTVLRNLTEMWYWIFLWALFS FT SLFVHGAAGVLMFVMLQRHRQGRVISVIAVSIGFLASVTGAMITSAAVAGIYRVAGKNM FT APLEALVWGVGQTVLTLIISFSRILATL" FT mRNA join(11538511..11538607,11565899..11566069, FT 11575664..11583757) FT /gene="TMEM170B" FT /locus_tag="RP11-679B17.1-001" FT /product="transmembrane protein 170B" FT /note="match: cDNAs: Em:AB048879.1" FT /note="match: ESTs: Em:AI885574.1 Em:AL636462.1 FT Em:BE102155.1 Em:BE671123.1 Em:BF573842.1 Em:BM490225.1 FT Em:BM667822.1 Em:D59294.1 Em:DN930568.1 Em:DT932548.1 FT Em:N64519.1" FT misc_feature 11573192 FT /note="Clone_right_end: RP11-716O23" FT polyA_signal 11579013..11579018 FT polyA_site 11579036 FT polyA_signal 11583694..11583699 FT polyA_signal 11583733..11583738 FT polyA_site 11583757 FT misc_feature 11615394..11615429 FT /note="Sequence from overlapping clone dJ328L5 (AL135909). FT Assembly confirmed by restriction digest" FT misc_feature 11644014 FT /note="Clone_left_end: RP1-310P17" FT misc_feature 11689157 FT /note="Clone_left_end: RP3-413H6" FT misc_feature complement(11689361..11822351) FT /note="annotated region of clone" FT mRNA join(11810835..11810982,11811076..11811481) FT /locus_tag="RP3-413H6.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI743878" FT mRNA complement(join(11717363..11717647,11723582..11723733, FT 11735801..11735916,11766507..11766608,11768482..11768616, FT 11778840..11779199,11803248..11803342,11807117..11807253)) FT /gene="RP3-413H6.1" FT /locus_tag="RP3-413H6.1-001" FT /product="novel protein similar to hamster FT androgen-dependent expressed protein" FT /note="match: ESTs: Em:AA393362 Em:AA700468 Em:BG696998 FT Em:BG697674 Em:BG740489 Em:BI008169 Em:BI148405" FT mRNA complement(join(11738766..11738855,11766507..11766608, FT 11768482..11768616,11770264..11770322,11778840..11779086)) FT /gene="RP3-413H6.1" FT /locus_tag="RP3-413H6.1-003" FT /product="novel protein similar to hamster FT androgen-dependent expressed protein" FT /note="match: ESTs: Em:AI005673" FT mRNA complement(join(11713888..11714745,11723582..11723733, FT 11735801..11735916,11766507..11766608,11768482..11768616, FT 11778840..11779066)) FT /gene="RP3-413H6.1" FT /locus_tag="RP3-413H6.1-002" FT /product="novel protein similar to hamster FT androgen-dependent expressed protein" FT /note="match: cDNAs: Em:AJ420520.1 Em:BC007011.1 FT Em:M80427.1" FT CDS complement(join(11717538..11717647,11723582..11723733, FT 11735801..11735916,11766507..11766608,11768482..11768616, FT 11778840..11778992)) FT /gene="RP3-413H6.1" FT /locus_tag="RP3-413H6.1-001" FT /standard_name="OTTHUMP00000016034" FT /product="novel protein similar to hamster FT androgen-dependent expressed protein" FT /note="match: proteins: Sw:Q60534 Sw:Q9D8B1 Sw:Q9D8B1 FT Sw:Q9NVV5 Sw:Q9NVV5 Tr:Q9VPN0 Tr:Q9VPN1" FT /protein_id="CAB38130.1" FT /translation="MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKY FT MTLLNLLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAFWI FT LFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAAS FT IAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWVSV FT QILQRWRLESVGICFQWPDWKSPAKHQLVKNIR" FT CDS complement(join(11714711..11714745,11723582..11723733, FT 11735801..11735916,11766507..11766608,11768482..11768616, FT 11778840..11778992)) FT /gene="RP3-413H6.1" FT /locus_tag="RP3-413H6.1-002" FT /standard_name="OTTHUMP00000016035" FT /product="novel protein similar to hamster FT androgen-dependent expressed protein" FT /note="match: proteins: Sw:Q96IZ2" FT /protein_id="CAI20503.1" FT /translation="MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKY FT MTLLNLLLQTIFYGVTCLDDVLKRTKGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAFWI FT LFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLAEVVLRPHSYPSKKTGLTLLAAAS FT IAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLLGEKLNHWKWGDM FT RQPRKKRK" FT polyA_signal complement(11717382..11717387) FT polyA_site complement(11717363) FT polyA_signal complement(11713920..11713925) FT polyA_signal complement(11713905..11713910) FT polyA_site complement(11713905) FT polyA_site complement(11713888) FT misc_feature 11822352..11966373 FT /note="annotated region of clone" FT CDS complement(11861859..11863203) FT /pseudo FT /locus_tag="RP3-420J14.1-001" FT /product="S-adenosylmethionine decarboxylase 1 (AMD1) (1EC FT 4.1.1.50, ADOMETDC) pseudogene" FT /note="match: proteins: Sw:O76240 Sw:P17707 Sw:P17708 FT Sw:P21182 Sw:P28918 Sw:P31154 Sw:P50243 Sw:P50244 Sw:P79888 FT Sw:P91931 Sw:Q25264 Sw:Q27883" FT misc_feature 11965245 FT /note="Clone_right_end: RP3-420J14" FT misc_feature 11966374..12060120 FT /note="annotated region of clone" FT polyA_site complement(11990576) FT polyA_signal complement(11990593..11990598) FT mRNA complement(join(11990576..11990753,11992148..11992245)) FT /locus_tag="RP11-456H18.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA972018" FT mRNA join(12007903..12008059,12008174..12008222, FT 12008512..12009089) FT /locus_tag="RP11-456H18.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA983919 Em:AI140840 Em:AI239847 FT Em:AI262047 Em:AI276184 Em:AI367079 Em:AI741930 Em:AI806616 FT Em:AW051319 Em:AW183758 Em:AW451834 Em:BE973932 Em:BF594636 FT Em:BG213539" FT polyA_signal 12009056..12009061 FT polyA_site 12009076 FT polyA_site 12009089 FT misc_feature 12011784..12011813 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 12012236..12012380 FT /note="Single clone region. Sequence from a short insert FT library derived from a single pUC clone. Restriction digest FT data confirm the assembly" FT mRNA join(12012571..12012799,12015759..12015901, FT AL391828.10:29397..29450,AL391828.10:60103..66083, FT AL391828.10:69972..70104,AL137221.8:101..105, FT AL137221.8:983..1151,AL137221.8:6000..6101, FT Z98050.1:25325..25815,Z98050.1:27169..28885) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA563642 Em:AA855161 Em:AA905787 FT Em:AI027414 Em:AI033710 Em:AI663958 Em:AI971788 Em:AW118764 FT Em:AW389740 Em:AW389765 Em:AW970813 Em:BB589808 Em:BB616625 FT Em:BB624753 Em:BB656211 Em:BE860090 Em:BF138360 Em:H82456 FT Em:H82471 Em:N28750 Em:N28795" FT /note="match: cDNAs: Em:M32019 Em:M32019.1 Em:X51435 FT Em:X51435.1 Em:X54250 Em:X65644 Em:X68946" FT mRNA join(12012724..12012799,12015759..12015901, FT 12020481..12020651,AL391828.10:29397..29450, FT AL391828.10:60103..60147,AL391828.10:69972..70104, FT AL137221.8:6000..6101,Z98050.1:25325..>25716) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA855161 Em:AI033710 Em:AI033710.1" FT CDS join(12015862..12015901,AL391828.10:29397..29450, FT AL391828.10:60103..66083,AL391828.10:69972..70104, FT AL137221.8:101..105,AL137221.8:983..1151, FT AL137221.8:6000..6101,Z98050.1:25325..25815, FT Z98050.1:27169..28347) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /standard_name="OTTHUMP00000016036" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: proteins: Sw:P15822 Sw:P15822 Sw:Q03172 FT Tr:Q01487 Tr:Q82133" FT /protein_id="CAH73982.1" FT /translation="MPRTKQIHPRNLRDKIEEAQKELNGAEVSKKEILQAGVKGTSESL FT KGVKRKKIVAENHLKKIPKSPLRNPLQAKHKQNTEESSFAVLHSASESHKKQNYIPVKN FT GKQFTKQNGETPGIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGADPAKFSDLDEQC FT DSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIKTE FT KLRPNKTARSPPKLKNSSMDAPNQTSQELVAESQSSCTSYTVHMSAAQKNEQGAMQSAS FT HLYHQHEHFVPKSNQHNQQLPGCSGFTGSLTNLQNQENAKLEQVYNIAVTSSVGLTSPS FT SRSQVTPQNQQMDSASPLSISPANSTQSPPMPIYNSTHVASVVNQSVEQMCNLLLKDQK FT PKKQGKYICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH FT TIKLGLVLQPDAGGLFLSHESPKALSIHSDVEDSGESEEEGATDERQHDLGAMELQPVH FT IIKRMSNAETLLKSSFTPSSPENVIGDFLLQDRSAESQAVTELPKVVVHHVTVSPLRTD FT SPKAMDPKPELSSAQKQKDLQVTNVQPLSANMSQGGVSRLETNENSHQKGDMNPLEGKQ FT DSHVGTVHAQLQRQQATDYSQEQQGKLLSPRSLGSTDSGYFSRSESADQTVSPPTPFAR FT RLPSTEQDSGRSNGPSAALVTTSTPSALPTGEKALLLPGQMRPPLATKTLEERISKLIS FT DNEALVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPVGRRTSSSSDIPKS FT PFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTTGYSAVPANIIPPPHPLRGSQSFDDKI FT GTFYDDVFVSGPNAPVPQSGHPRTLVRQAAIEDSSANESHVLGTGQSLDESHQGCHAAG FT EAMSVRSKALAQGPHIEKKKSHQGRGTMFECETCRNRYRKLENFENHKKFYCSELHGPK FT TKVAMREPEHSPVPGGLQPQILHYRVAGSSGIWEQTPQIRKRRKMKSVGDDEELQQNES FT GTSPKSSEGLQFQNALGCNPSLPKHNVTIRSDQQHKNIQLQNSHIHLVARGPEQTMDPK FT LSTIMEQQISSAAQDKIELQRHGTGISVIQHTNSLSRPNSFDKPEPFERASPVSFQELN FT RTGKSGSLKVIGISQEESHPSRDGSHPHQLALSDALRGELQESSRKSPSERHVLGQPSR FT LVRQHNIQVPEILVTEEPDRDLEAQCHDQEKSEKFSWPQRSETLSKLPTEKLPPKKKRL FT RLAEIEHSSTESSFDSTLSRSLSRESSLSHTSSFSASLDIEDVSKTEASPKIDFLNKAE FT FLMIPAGLNTLNVPGCHREMRRTASEQINCTQTSMEVSDLRSKSFDCGSITPPQTTPLT FT ELQPPSSPSRVGVTGHVPLLERRRGPLVRQISLNIAPDSHLSPVHPTSFQNTALPSVNA FT VPYQGPQLTSTSLAEFSANTLHSQTQVKDLQAETSNSSSTNVFPVQQLCDINLLNQIHA FT PPSHQSTQLSLQVSTQGSKPDKNSVLSGSSKSEDCFAPKYQLHCQVFTSGPSCSSNPVH FT SLPNQVISDPVGTDHCVTSATLPTKLIDSMSNSHPLLPPELRPLGSQVQKVPSSFMLPI FT RLQSSVPAYCFATLTSLPQILVTQDLPNQPICQTNHSVVPISEEQNSVPTLQKGHQNAL FT PNPEKEFLCENVFSEMSQNSSLSESLPITQKISVGRLSPQQESSASSKRMLSPANSLDI FT AMEKHQKRAKDENGAVCATDVRPLEALSSRVNEASKQKKPILVRQVCTTEPLDGVMLEK FT DVFSQPEISNEAVNLTNVLPADNSSTGCSKFVVIEPISELQEFENIKSSTSLTLTVRSS FT PAPSENTHISPLKCTDNNQERKSPGVKNQGDKVNIQEQSQQPVTSLSLFNIKDTQQLAF FT PSLKTTTNFTWCYLLRQKSLHLPQKDQKTSAYTDWTVSASNPNPLGLPTKVALALLNSK FT QNTGKSLYCQAITTHSKSDLLVYSSKWKSSLSKRALGNQKSTVVEFSNKDASEINSEQD FT KENSLIKSEPRRIKIFDGGQSNEEYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHT FT DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSY FT ERSGYDLEESDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTD FT EDVRITDCFSGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDT FT IPSVDTSRSPCHQMSVDYPESEEILRSSMAGKAVAITQSPSSVRLPPAAAEHSPQTAAG FT MPSVASPHPDPQEQKQQITLQPTPGLPSPHTHLFSHLPLHSQQQSRTPYNMVPVGGIHV FT VPAGLTYSTFVPLQAGPVQLTIPAVSVVHRTLGTHRNTVTEVSGTTNPAGVAELSSVVP FT CIPIGQIRVPGLQNLSTPGLQSLPSLSMETVNIVGLANTNMAPQVHPPGLALNAVGLQV FT LTANPSSQSSPAPQAHIPGLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACETQP FT KQTSVASANQVSRTESPQGLPTVQRENAKKVLNPPAPAGDHARLDGLSKMDTEKAASAN FT HVKPKPELTSIQGQPASTSQPLLKAHSEVFTKPSGQQTLSPDRQVPRPTALPRRQPTVH FT FSDVSSDDDEDRLVIAT" FT CDS join(12020547..12020651,AL391828.10:29397..29450, FT AL391828.10:60103..60147,AL391828.10:69972..70104, FT AL137221.8:6000..6101,Z98050.1:25325..>25716) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /standard_name="OTTHUMP00000016037" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /protein_id="CAH73983.1" FT /translation="MRAALGVQKKGLACCPGFRGEGSLDCTGWLFRMVLTKLKKHKKNL FT MGQKFQKKKSYRLVLKELRNPLKRALGNQKSTVVEFSNKDASEINSEQDKENSLIKSEP FT RRIKIFDGGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSYERSGYDLEE FT SDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDCF FT SGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVD" FT misc_feature 12034795 FT /note="Clone_left_end: RP11-447A22" FT misc_feature 12060020 FT /note="Clone_right_end: RP11-456H18" FT misc_feature 12060121..12130124 FT /note="annotated region of clone" FT mRNA join(AL157373.23:46298..46526,AL157373.23:49486..49628, FT 12089417..12089470,12120123..12126103,12129992..12130124, FT AL137221.8:101..105,AL137221.8:983..1151, FT AL137221.8:6000..6101,Z98050.1:25325..25815, FT Z98050.1:27169..28885) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA563642 Em:AA855161 Em:AA905787 FT Em:AI027414 Em:AI033710 Em:AI663958 Em:AI971788 Em:AW118764 FT Em:AW389740 Em:AW389765 Em:AW970813 Em:BB589808 Em:BB616625 FT Em:BB624753 Em:BB656211 Em:BE860090 Em:BF138360 Em:H82456 FT Em:H82471 Em:N28750 Em:N28795" FT /note="match: cDNAs: Em:M32019 Em:M32019.1 Em:X51435 FT Em:X51435.1 Em:X54250 Em:X65644 Em:X68946" FT mRNA join(AL157373.23:46451..46526,AL157373.23:49486..49628, FT AL157373.23:54208..54378,12089417..12089470, FT 12120123..12120167,12129992..12130124, FT AL137221.8:6000..6101,Z98050.1:25325..>25716) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA855161 Em:AI033710 Em:AI033710.1" FT CDS join(AL157373.23:49589..49628,12089417..12089470, FT 12120123..12126103,12129992..12130124,AL137221.8:101..105, FT AL137221.8:983..1151,AL137221.8:6000..6101, FT Z98050.1:25325..25815,Z98050.1:27169..28347) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /standard_name="OTTHUMP00000016036" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: proteins: Sw:P15822 Sw:P15822 Sw:Q03172 FT Tr:Q01487 Tr:Q82133" FT /protein_id="CAH73909.1" FT /translation="MPRTKQIHPRNLRDKIEEAQKELNGAEVSKKEILQAGVKGTSESL FT KGVKRKKIVAENHLKKIPKSPLRNPLQAKHKQNTEESSFAVLHSASESHKKQNYIPVKN FT GKQFTKQNGETPGIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGADPAKFSDLDEQC FT DSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIKTE FT KLRPNKTARSPPKLKNSSMDAPNQTSQELVAESQSSCTSYTVHMSAAQKNEQGAMQSAS FT HLYHQHEHFVPKSNQHNQQLPGCSGFTGSLTNLQNQENAKLEQVYNIAVTSSVGLTSPS FT SRSQVTPQNQQMDSASPLSISPANSTQSPPMPIYNSTHVASVVNQSVEQMCNLLLKDQK FT PKKQGKYICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH FT TIKLGLVLQPDAGGLFLSHESPKALSIHSDVEDSGESEEEGATDERQHDLGAMELQPVH FT IIKRMSNAETLLKSSFTPSSPENVIGDFLLQDRSAESQAVTELPKVVVHHVTVSPLRTD FT SPKAMDPKPELSSAQKQKDLQVTNVQPLSANMSQGGVSRLETNENSHQKGDMNPLEGKQ FT DSHVGTVHAQLQRQQATDYSQEQQGKLLSPRSLGSTDSGYFSRSESADQTVSPPTPFAR FT RLPSTEQDSGRSNGPSAALVTTSTPSALPTGEKALLLPGQMRPPLATKTLEERISKLIS FT DNEALVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPVGRRTSSSSDIPKS FT PFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTTGYSAVPANIIPPPHPLRGSQSFDDKI FT GTFYDDVFVSGPNAPVPQSGHPRTLVRQAAIEDSSANESHVLGTGQSLDESHQGCHAAG FT EAMSVRSKALAQGPHIEKKKSHQGRGTMFECETCRNRYRKLENFENHKKFYCSELHGPK FT TKVAMREPEHSPVPGGLQPQILHYRVAGSSGIWEQTPQIRKRRKMKSVGDDEELQQNES FT GTSPKSSEGLQFQNALGCNPSLPKHNVTIRSDQQHKNIQLQNSHIHLVARGPEQTMDPK FT LSTIMEQQISSAAQDKIELQRHGTGISVIQHTNSLSRPNSFDKPEPFERASPVSFQELN FT RTGKSGSLKVIGISQEESHPSRDGSHPHQLALSDALRGELQESSRKSPSERHVLGQPSR FT LVRQHNIQVPEILVTEEPDRDLEAQCHDQEKSEKFSWPQRSETLSKLPTEKLPPKKKRL FT RLAEIEHSSTESSFDSTLSRSLSRESSLSHTSSFSASLDIEDVSKTEASPKIDFLNKAE FT FLMIPAGLNTLNVPGCHREMRRTASEQINCTQTSMEVSDLRSKSFDCGSITPPQTTPLT FT ELQPPSSPSRVGVTGHVPLLERRRGPLVRQISLNIAPDSHLSPVHPTSFQNTALPSVNA FT VPYQGPQLTSTSLAEFSANTLHSQTQVKDLQAETSNSSSTNVFPVQQLCDINLLNQIHA FT PPSHQSTQLSLQVSTQGSKPDKNSVLSGSSKSEDCFAPKYQLHCQVFTSGPSCSSNPVH FT SLPNQVISDPVGTDHCVTSATLPTKLIDSMSNSHPLLPPELRPLGSQVQKVPSSFMLPI FT RLQSSVPAYCFATLTSLPQILVTQDLPNQPICQTNHSVVPISEEQNSVPTLQKGHQNAL FT PNPEKEFLCENVFSEMSQNSSLSESLPITQKISVGRLSPQQESSASSKRMLSPANSLDI FT AMEKHQKRAKDENGAVCATDVRPLEALSSRVNEASKQKKPILVRQVCTTEPLDGVMLEK FT DVFSQPEISNEAVNLTNVLPADNSSTGCSKFVVIEPISELQEFENIKSSTSLTLTVRSS FT PAPSENTHISPLKCTDNNQERKSPGVKNQGDKVNIQEQSQQPVTSLSLFNIKDTQQLAF FT PSLKTTTNFTWCYLLRQKSLHLPQKDQKTSAYTDWTVSASNPNPLGLPTKVALALLNSK FT QNTGKSLYCQAITTHSKSDLLVYSSKWKSSLSKRALGNQKSTVVEFSNKDASEINSEQD FT KENSLIKSEPRRIKIFDGGQSNEEYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHT FT DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSY FT ERSGYDLEESDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTD FT EDVRITDCFSGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDT FT IPSVDTSRSPCHQMSVDYPESEEILRSSMAGKAVAITQSPSSVRLPPAAAEHSPQTAAG FT MPSVASPHPDPQEQKQQITLQPTPGLPSPHTHLFSHLPLHSQQQSRTPYNMVPVGGIHV FT VPAGLTYSTFVPLQAGPVQLTIPAVSVVHRTLGTHRNTVTEVSGTTNPAGVAELSSVVP FT CIPIGQIRVPGLQNLSTPGLQSLPSLSMETVNIVGLANTNMAPQVHPPGLALNAVGLQV FT LTANPSSQSSPAPQAHIPGLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACETQP FT KQTSVASANQVSRTESPQGLPTVQRENAKKVLNPPAPAGDHARLDGLSKMDTEKAASAN FT HVKPKPELTSIQGQPASTSQPLLKAHSEVFTKPSGQQTLSPDRQVPRPTALPRRQPTVH FT FSDVSSDDDEDRLVIAT" FT CDS join(AL157373.23:54274..54378,12089417..12089470, FT 12120123..12120167,12129992..12130124, FT AL137221.8:6000..6101,Z98050.1:25325..>25716) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /standard_name="OTTHUMP00000016037" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /protein_id="CAH73910.1" FT /translation="MRAALGVQKKGLACCPGFRGEGSLDCTGWLFRMVLTKLKKHKKNL FT MGQKFQKKKSYRLVLKELRNPLKRALGNQKSTVVEFSNKDASEINSEQDKENSLIKSEP FT RRIKIFDGGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSYERSGYDLEE FT SDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDCF FT SGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVD" FT misc_feature 12129925 FT /note="Clone_left_end: RP11-4A24" FT misc_feature 12130125..12136447 FT /note="annotated region of clone" FT misc_feature 12136248 FT /note="Clone_left_end: RP3-451B15" FT mRNA join(AL157373.23:46298..46526,AL157373.23:49486..49628, FT AL391828.10:29397..29450,AL391828.10:60103..66083, FT AL391828.10:69972..70104,12130125..12130129, FT 12131007..12131175,12136024..12136125, FT Z98050.1:25325..25815,Z98050.1:27169..28885) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA563642 Em:AA855161 Em:AA905787 FT Em:AI027414 Em:AI033710 Em:AI663958 Em:AI971788 Em:AW118764 FT Em:AW389740 Em:AW389765 Em:AW970813 Em:BB589808 Em:BB616625 FT Em:BB624753 Em:BB656211 Em:BE860090 Em:BF138360 Em:H82456 FT Em:H82471 Em:N28750 Em:N28795" FT /note="match: cDNAs: Em:M32019 Em:M32019.1 Em:X51435 FT Em:X51435.1 Em:X54250 Em:X65644 Em:X68946" FT mRNA join(AL157373.23:46451..46526,AL157373.23:49486..49628, FT AL157373.23:54208..54378,AL391828.10:29397..29450, FT AL391828.10:60103..60147,AL391828.10:69972..70104, FT 12136024..12136125,Z98050.1:25325..>25716) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA855161 Em:AI033710 Em:AI033710.1" FT CDS join(AL157373.23:49589..49628,AL391828.10:29397..29450, FT AL391828.10:60103..66083,AL391828.10:69972..70104, FT 12130125..12130129,12131007..12131175,12136024..12136125, FT Z98050.1:25325..25815,Z98050.1:27169..28347) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /standard_name="OTTHUMP00000016036" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: proteins: Sw:P15822 Sw:P15822 Sw:Q03172 FT Tr:Q01487 Tr:Q82133" FT /protein_id="CAI14768.1" FT /translation="MPRTKQIHPRNLRDKIEEAQKELNGAEVSKKEILQAGVKGTSESL FT KGVKRKKIVAENHLKKIPKSPLRNPLQAKHKQNTEESSFAVLHSASESHKKQNYIPVKN FT GKQFTKQNGETPGIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGADPAKFSDLDEQC FT DSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIKTE FT KLRPNKTARSPPKLKNSSMDAPNQTSQELVAESQSSCTSYTVHMSAAQKNEQGAMQSAS FT HLYHQHEHFVPKSNQHNQQLPGCSGFTGSLTNLQNQENAKLEQVYNIAVTSSVGLTSPS FT SRSQVTPQNQQMDSASPLSISPANSTQSPPMPIYNSTHVASVVNQSVEQMCNLLLKDQK FT PKKQGKYICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH FT TIKLGLVLQPDAGGLFLSHESPKALSIHSDVEDSGESEEEGATDERQHDLGAMELQPVH FT IIKRMSNAETLLKSSFTPSSPENVIGDFLLQDRSAESQAVTELPKVVVHHVTVSPLRTD FT SPKAMDPKPELSSAQKQKDLQVTNVQPLSANMSQGGVSRLETNENSHQKGDMNPLEGKQ FT DSHVGTVHAQLQRQQATDYSQEQQGKLLSPRSLGSTDSGYFSRSESADQTVSPPTPFAR FT RLPSTEQDSGRSNGPSAALVTTSTPSALPTGEKALLLPGQMRPPLATKTLEERISKLIS FT DNEALVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPVGRRTSSSSDIPKS FT PFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTTGYSAVPANIIPPPHPLRGSQSFDDKI FT GTFYDDVFVSGPNAPVPQSGHPRTLVRQAAIEDSSANESHVLGTGQSLDESHQGCHAAG FT EAMSVRSKALAQGPHIEKKKSHQGRGTMFECETCRNRYRKLENFENHKKFYCSELHGPK FT TKVAMREPEHSPVPGGLQPQILHYRVAGSSGIWEQTPQIRKRRKMKSVGDDEELQQNES FT GTSPKSSEGLQFQNALGCNPSLPKHNVTIRSDQQHKNIQLQNSHIHLVARGPEQTMDPK FT LSTIMEQQISSAAQDKIELQRHGTGISVIQHTNSLSRPNSFDKPEPFERASPVSFQELN FT RTGKSGSLKVIGISQEESHPSRDGSHPHQLALSDALRGELQESSRKSPSERHVLGQPSR FT LVRQHNIQVPEILVTEEPDRDLEAQCHDQEKSEKFSWPQRSETLSKLPTEKLPPKKKRL FT RLAEIEHSSTESSFDSTLSRSLSRESSLSHTSSFSASLDIEDVSKTEASPKIDFLNKAE FT FLMIPAGLNTLNVPGCHREMRRTASEQINCTQTSMEVSDLRSKSFDCGSITPPQTTPLT FT ELQPPSSPSRVGVTGHVPLLERRRGPLVRQISLNIAPDSHLSPVHPTSFQNTALPSVNA FT VPYQGPQLTSTSLAEFSANTLHSQTQVKDLQAETSNSSSTNVFPVQQLCDINLLNQIHA FT PPSHQSTQLSLQVSTQGSKPDKNSVLSGSSKSEDCFAPKYQLHCQVFTSGPSCSSNPVH FT SLPNQVISDPVGTDHCVTSATLPTKLIDSMSNSHPLLPPELRPLGSQVQKVPSSFMLPI FT RLQSSVPAYCFATLTSLPQILVTQDLPNQPICQTNHSVVPISEEQNSVPTLQKGHQNAL FT PNPEKEFLCENVFSEMSQNSSLSESLPITQKISVGRLSPQQESSASSKRMLSPANSLDI FT AMEKHQKRAKDENGAVCATDVRPLEALSSRVNEASKQKKPILVRQVCTTEPLDGVMLEK FT DVFSQPEISNEAVNLTNVLPADNSSTGCSKFVVIEPISELQEFENIKSSTSLTLTVRSS FT PAPSENTHISPLKCTDNNQERKSPGVKNQGDKVNIQEQSQQPVTSLSLFNIKDTQQLAF FT PSLKTTTNFTWCYLLRQKSLHLPQKDQKTSAYTDWTVSASNPNPLGLPTKVALALLNSK FT QNTGKSLYCQAITTHSKSDLLVYSSKWKSSLSKRALGNQKSTVVEFSNKDASEINSEQD FT KENSLIKSEPRRIKIFDGGQSNEEYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHT FT DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSY FT ERSGYDLEESDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTD FT EDVRITDCFSGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDT FT IPSVDTSRSPCHQMSVDYPESEEILRSSMAGKAVAITQSPSSVRLPPAAAEHSPQTAAG FT MPSVASPHPDPQEQKQQITLQPTPGLPSPHTHLFSHLPLHSQQQSRTPYNMVPVGGIHV FT VPAGLTYSTFVPLQAGPVQLTIPAVSVVHRTLGTHRNTVTEVSGTTNPAGVAELSSVVP FT CIPIGQIRVPGLQNLSTPGLQSLPSLSMETVNIVGLANTNMAPQVHPPGLALNAVGLQV FT LTANPSSQSSPAPQAHIPGLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACETQP FT KQTSVASANQVSRTESPQGLPTVQRENAKKVLNPPAPAGDHARLDGLSKMDTEKAASAN FT HVKPKPELTSIQGQPASTSQPLLKAHSEVFTKPSGQQTLSPDRQVPRPTALPRRQPTVH FT FSDVSSDDDEDRLVIAT" FT CDS join(AL157373.23:54274..54378,AL391828.10:29397..29450, FT AL391828.10:60103..60147,AL391828.10:69972..70104, FT 12136024..12136125,Z98050.1:25325..>25716) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /standard_name="OTTHUMP00000016037" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /protein_id="CAI14769.1" FT /translation="MRAALGVQKKGLACCPGFRGEGSLDCTGWLFRMVLTKLKKHKKNL FT MGQKFQKKKSYRLVLKELRNPLKRALGNQKSTVVEFSNKDASEINSEQDKENSLIKSEP FT RRIKIFDGGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSYERSGYDLEE FT SDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDCF FT SGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVD" FT misc_feature 12136448..12322857 FT /note="annotated region of clone" FT polyA_site 12165232 FT mRNA join(AL157373.23:46298..46526,AL157373.23:49486..49628, FT AL391828.10:29397..29450,AL391828.10:60103..66083, FT AL391828.10:69972..70104,AL137221.8:101..105, FT AL137221.8:983..1151,AL137221.8:6000..6101, FT 12161672..12162162,12163516..12165232) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA563642 Em:AA855161 Em:AA905787 FT Em:AI027414 Em:AI033710 Em:AI663958 Em:AI971788 Em:AW118764 FT Em:AW389740 Em:AW389765 Em:AW970813 Em:BB589808 Em:BB616625 FT Em:BB624753 Em:BB656211 Em:BE860090 Em:BF138360 Em:H82456 FT Em:H82471 Em:N28750 Em:N28795" FT /note="match: cDNAs: Em:M32019 Em:M32019.1 Em:X51435 FT Em:X51435.1 Em:X54250 Em:X65644 Em:X68946" FT mRNA join(AL157373.23:46451..46526,AL157373.23:49486..49628, FT AL157373.23:54208..54378,AL391828.10:29397..29450, FT AL391828.10:60103..60147,AL391828.10:69972..70104, FT AL137221.8:6000..6101,12161672..>12162063) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: ESTs: Em:AA855161 Em:AI033710 Em:AI033710.1" FT CDS join(AL157373.23:49589..49628,AL391828.10:29397..29450, FT AL391828.10:60103..66083,AL391828.10:69972..70104, FT AL137221.8:101..105,AL137221.8:983..1151, FT AL137221.8:6000..6101,12161672..12162162, FT 12163516..12164694) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-001" FT /standard_name="OTTHUMP00000016036" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /note="match: proteins: Sw:P15822 Sw:P15822 Sw:Q03172 FT Tr:Q01487 Tr:Q82133" FT /protein_id="CAI21070.1" FT /translation="MPRTKQIHPRNLRDKIEEAQKELNGAEVSKKEILQAGVKGTSESL FT KGVKRKKIVAENHLKKIPKSPLRNPLQAKHKQNTEESSFAVLHSASESHKKQNYIPVKN FT GKQFTKQNGETPGIIAEASKSEESVSPKKPLFLQQPSELRRWRSEGADPAKFSDLDEQC FT DSSSLSSKTRTDNSECISSHCGTTSPSYTNTAFDVLLKAMEPELSTLSQKGSPCAIKTE FT KLRPNKTARSPPKLKNSSMDAPNQTSQELVAESQSSCTSYTVHMSAAQKNEQGAMQSAS FT HLYHQHEHFVPKSNQHNQQLPGCSGFTGSLTNLQNQENAKLEQVYNIAVTSSVGLTSPS FT SRSQVTPQNQQMDSASPLSISPANSTQSPPMPIYNSTHVASVVNQSVEQMCNLLLKDQK FT PKKQGKYICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAH FT TIKLGLVLQPDAGGLFLSHESPKALSIHSDVEDSGESEEEGATDERQHDLGAMELQPVH FT IIKRMSNAETLLKSSFTPSSPENVIGDFLLQDRSAESQAVTELPKVVVHHVTVSPLRTD FT SPKAMDPKPELSSAQKQKDLQVTNVQPLSANMSQGGVSRLETNENSHQKGDMNPLEGKQ FT DSHVGTVHAQLQRQQATDYSQEQQGKLLSPRSLGSTDSGYFSRSESADQTVSPPTPFAR FT RLPSTEQDSGRSNGPSAALVTTSTPSALPTGEKALLLPGQMRPPLATKTLEERISKLIS FT DNEALVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPVGRRTSSSSDIPKS FT PFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTTGYSAVPANIIPPPHPLRGSQSFDDKI FT GTFYDDVFVSGPNAPVPQSGHPRTLVRQAAIEDSSANESHVLGTGQSLDESHQGCHAAG FT EAMSVRSKALAQGPHIEKKKSHQGRGTMFECETCRNRYRKLENFENHKKFYCSELHGPK FT TKVAMREPEHSPVPGGLQPQILHYRVAGSSGIWEQTPQIRKRRKMKSVGDDEELQQNES FT GTSPKSSEGLQFQNALGCNPSLPKHNVTIRSDQQHKNIQLQNSHIHLVARGPEQTMDPK FT LSTIMEQQISSAAQDKIELQRHGTGISVIQHTNSLSRPNSFDKPEPFERASPVSFQELN FT RTGKSGSLKVIGISQEESHPSRDGSHPHQLALSDALRGELQESSRKSPSERHVLGQPSR FT LVRQHNIQVPEILVTEEPDRDLEAQCHDQEKSEKFSWPQRSETLSKLPTEKLPPKKKRL FT RLAEIEHSSTESSFDSTLSRSLSRESSLSHTSSFSASLDIEDVSKTEASPKIDFLNKAE FT FLMIPAGLNTLNVPGCHREMRRTASEQINCTQTSMEVSDLRSKSFDCGSITPPQTTPLT FT ELQPPSSPSRVGVTGHVPLLERRRGPLVRQISLNIAPDSHLSPVHPTSFQNTALPSVNA FT VPYQGPQLTSTSLAEFSANTLHSQTQVKDLQAETSNSSSTNVFPVQQLCDINLLNQIHA FT PPSHQSTQLSLQVSTQGSKPDKNSVLSGSSKSEDCFAPKYQLHCQVFTSGPSCSSNPVH FT SLPNQVISDPVGTDHCVTSATLPTKLIDSMSNSHPLLPPELRPLGSQVQKVPSSFMLPI FT RLQSSVPAYCFATLTSLPQILVTQDLPNQPICQTNHSVVPISEEQNSVPTLQKGHQNAL FT PNPEKEFLCENVFSEMSQNSSLSESLPITQKISVGRLSPQQESSASSKRMLSPANSLDI FT AMEKHQKRAKDENGAVCATDVRPLEALSSRVNEASKQKKPILVRQVCTTEPLDGVMLEK FT DVFSQPEISNEAVNLTNVLPADNSSTGCSKFVVIEPISELQEFENIKSSTSLTLTVRSS FT PAPSENTHISPLKCTDNNQERKSPGVKNQGDKVNIQEQSQQPVTSLSLFNIKDTQQLAF FT PSLKTTTNFTWCYLLRQKSLHLPQKDQKTSAYTDWTVSASNPNPLGLPTKVALALLNSK FT QNTGKSLYCQAITTHSKSDLLVYSSKWKSSLSKRALGNQKSTVVEFSNKDASEINSEQD FT KENSLIKSEPRRIKIFDGGQSNEEYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHT FT DVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSY FT ERSGYDLEESDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTD FT EDVRITDCFSGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDT FT IPSVDTSRSPCHQMSVDYPESEEILRSSMAGKAVAITQSPSSVRLPPAAAEHSPQTAAG FT MPSVASPHPDPQEQKQQITLQPTPGLPSPHTHLFSHLPLHSQQQSRTPYNMVPVGGIHV FT VPAGLTYSTFVPLQAGPVQLTIPAVSVVHRTLGTHRNTVTEVSGTTNPAGVAELSSVVP FT CIPIGQIRVPGLQNLSTPGLQSLPSLSMETVNIVGLANTNMAPQVHPPGLALNAVGLQV FT LTANPSSQSSPAPQAHIPGLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACETQP FT KQTSVASANQVSRTESPQGLPTVQRENAKKVLNPPAPAGDHARLDGLSKMDTEKAASAN FT HVKPKPELTSIQGQPASTSQPLLKAHSEVFTKPSGQQTLSPDRQVPRPTALPRRQPTVH FT FSDVSSDDDEDRLVIAT" FT CDS join(AL157373.23:54274..54378,AL391828.10:29397..29450, FT AL391828.10:60103..60147,AL391828.10:69972..70104, FT AL137221.8:6000..6101,12161672..>12162063) FT /gene="HIVEP1" FT /locus_tag="RP3-451B15.2-002" FT /standard_name="OTTHUMP00000016037" FT /product="human immunodeficiency virus type I enhancer FT binding protein 1" FT /protein_id="CAI21071.1" FT /translation="MRAALGVQKKGLACCPGFRGEGSLDCTGWLFRMVLTKLKKHKKNL FT MGQKFQKKKSYRLVLKELRNPLKRALGNQKSTVVEFSNKDASEINSEQDKENSLIKSEP FT RRIKIFDGGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSYERSGYDLEE FT SDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDCF FT SGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVD" FT mRNA join(12290596..12290926,12292574..12292742, FT 12294174..12294329,12294494..12294637,12296195..12297427) FT /gene="EDN1" FT /locus_tag="RP3-451B15.1-001" FT /product="endothelin 1" FT /note="match: ESTs: Em:AL533672 Em:AL543736 Em:AL548042 FT Em:AL550935 Em:BI758161 Em:BI818778 Em:BI821379" FT /note="match: cDNAs: Em:BC009720.1 Em:E02620.1 Em:S56805.1 FT Em:Y00749.1" FT CDS join(12290863..12290926,12292574..12292742, FT 12294174..12294329,12294494..12294637,12296195..12296300) FT /gene="EDN1" FT /locus_tag="RP3-451B15.1-001" FT /standard_name="OTTHUMP00000016038" FT /product="endothelin 1" FT /note="match: proteins: Sw:P05305 Sw:P05305 Sw:P22387 FT Sw:P22388 Sw:P97740" FT /protein_id="CAB10846.1" FT /translation="MDYLLMIFSLLFVACQGAPETAVLGAELSAVGENGGEKPTPSPPW FT RLRRSKRCSCSSLMDKECVYFCHLDIIWVNTPEHVVPYGLGSPRSKRALENLLPTKATD FT RENRCQCASQKDKKCWNFCQAGKELRAEDIMEKDWNNHKKGKDCSKLGKKCIYQQLVRG FT RKIRRSSEEHLRQTRSETMRNSVKSSFHDPKLKGKPSRERYVTHNRAHW" FT polyA_signal 12297403..12297408 FT polyA_site 12297427 FT CDS 12319685..12319824 FT /pseudo FT /locus_tag="RP3-451B15.3-001" FT /product="SMT3 suppressor of mif two 3 homolog 1 (yeast) FT (SMT3H1) pseudogene" FT /note="match: proteins: Sw:P55854 Sw:P55854 Sw:P61956 FT Sw:P61956 Sw:P61956 Sw:P61957 Sw:P61957 Sw:P61957 Sw:P61958 FT Sw:P61959 Sw:P61959 Sw:Q9Z172" FT misc_feature 12322757 FT /note="Clone_right_end: RP3-451B15" FT misc_feature 12340860 FT /note="Clone_left_end: RP11-511D14" FT misc_feature 12341060..12531182 FT /note="annotated region of clone" FT misc_feature 12356986..12357053 FT /note="Sequence from uni-directional dGTP reads only" FT misc_feature 12404201 FT /note="Clone_left_end: RP11-124B11" FT misc_feature 12471709 FT /note="Clone_right_end: RP11-97A19" FT CDS 12514342..12514956 FT /pseudo FT /locus_tag="RP11-511D14.1-001" FT /product="ribosomal protein L15 pseudogene 3" FT /note="match: proteins: Sw:O13418 Sw:O17445 Sw:O23515 FT Sw:O65050 Sw:O65082 Sw:O74895 Sw:O82528 Sw:P05748 Sw:P30736 FT Sw:P51417 Sw:P54780 Sw:P61314 Sw:P79324 Sw:P91374 Sw:Q9XYC2 FT Tr:Q9N9V8" FT /db_xref="PSEUDO:CAI14965.1" FT misc_feature 12531082 FT /note="Clone_right_end: RP11-511D14" FT misc_feature 12576768 FT /note="Clone_right_end: RP11-124B11" FT misc_feature 12576869..12585515 FT /note="annotated region of clone" FT mRNA join(AL353617.6:4327..4447,complement(12585336..12585515), FT complement(12583147..12583739)) FT /locus_tag="RP11-125M16.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG721358" FT misc_feature 12585316 FT /note="Clone_left_end: RP11-437C22" FT misc_feature complement(12585516..12589962) FT /note="annotated region of clone" FT mRNA complement(join(AL591068.5:6379..6971, FT AL591068.5:8568..8747,12585516..12585636)) FT /locus_tag="RP11-125M16.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG721358" FT misc_feature complement(12585615) FT /note="Clone_right_end: RP3-441J1" FT misc_feature complement(12589963..12741074) FT /note="annotated region of clone" FT CDS join(12718977..12719079,AL354680.14:4840..4986, FT AL591682.8:115716..115880,AL391385.8:60555..60635, FT AL008729.1:5399..5566,AL008729.1:28695..29016, FT AL008729.1:50696..50943,AL008729.1:52917..53073, FT AL008729.1:95740..95803) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /standard_name="OTTHUMP00000016040" FT /product="RPEL repeat containing 1" FT /note="match: proteins: Sw:Q9C0D0" FT /protein_id="CAI20986.1" FT /translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPT FT LMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHT FT PPIRRRSKFANLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVLKEIY FT DKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIMDGPD FT PGAPVKLPCLPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQKSGQQGVAQHHHTVLPS FT QIQHQLQYGSHGQHLPSTTGSLPMHPSGCRMIDELNKTLAMTMQRLESSEQRVPCSTSY FT HSSGLHSGDGVTKAGPMGLPEIRQVPTVVIECDDNKENVPHESDYEDSSCLYTREEEEE FT EEDEDDDSSLYTSSLAMKVCRKDSLAIKLSNRPSKRELEEKNILPRQTDEERLELRQQI FT GTKLTRRLSQRPTAEELEQRNILKRK" FT CDS join(12718977..12719079,AL354680.14:4840..4986, FT AL354680.14:188829..189088) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-010" FT /standard_name="OTTHUMP00000016046" FT /product="RPEL repeat containing 1" FT /protein_id="CAI20987.1" FT /translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPT FT LMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGVSLFGDMDEARMGPAVPTLG FT RPLGLELCSLENHGLLKTAPTYTTSAHICSGPSTGGQFSTQGMSPVQGAKRRRVVWLPL FT EGEEFG" FT mRNA join(12718542..12718672,12718931..12719079, FT AL354680.14:4840..4986,AL354680.14:188829..189196) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-010" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BG120957.1" FT mRNA join(12717893..12717975,12718931..12719079, FT AL354680.14:4840..4986,AL591682.8:115716..115880, FT AL391385.8:60555..60635,AL008729.1:5399..5566, FT AL008729.1:28695..29016,AL008729.1:50696..50943, FT AL008729.1:52917..53073,AL008729.1:95740..99003) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AA364675.1 Em:AA371801.1 FT Em:AA749380.1 Em:AA810810.1 Em:AI864952.1 Em:AU050871.1 FT Em:AU078999.1 Em:AU080890.1 Em:AU171374.1 Em:AW468218.1 FT Em:BE308756.1 Em:BE716223.1 Em:BF197298.1 Em:BF850192.1 FT Em:BF933805.1 Em:BM704008.1 Em:H67505.1 Em:M78996.1 FT Em:R99333.1" FT /note="match: cDNAs: Em:AB051520.1" FT misc_feature 12741075..12745136 FT /note="annotated region of clone" FT misc_feature 12744937 FT /note="Clone_left_end: RP11-536F8" FT misc_feature 12745137..12939881 FT /note="annotated region of clone" FT mRNA join(<12749667..12750022,AL591682.8:115716..115880, FT AL391385.8:60555..60635,AL008729.1:5399..5566, FT AL008729.1:7679..>7700) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-006" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AI879127.1 Em:BB648839.1" FT CDS join(<12749667..12750022,AL591682.8:115716..115880, FT AL391385.8:60555..60635,AL008729.1:5399..5566, FT AL008729.1:7679..>7700) FT /codon_start=2 FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-006" FT /standard_name="OTTHUMP00000016045" FT /product="RPEL repeat containing 1" FT /protein_id="CAI41066.1" FT /translation="SPFTPFSPLLSFFLSPFFFLFPSLSHSLPTPSLPLPSPFPSPSPV FT REPLPLPSSPFRLSPSPSVSFSLSARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDT FT PYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHTPPIRRRSKFANLGRIFKPWKWRKK FT KSEKFKHTSAALERKISMRQSREELIKRGVLKEIYDKDGELSISNEEDSLENGQSLSSS FT QLSLPALSEMEPVPMPRDPCSYEVLQPSDIMDGPVSEESPSA" FT CDS join(complement(Z99495.1:21996..22098),12749876..12750022, FT AL591682.8:115716..115880,AL391385.8:60555..60635, FT AL008729.1:5399..5566,AL008729.1:28695..29016, FT AL008729.1:50696..50943,AL008729.1:52917..53073, FT AL008729.1:95740..95803) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /standard_name="OTTHUMP00000016040" FT /product="RPEL repeat containing 1" FT /note="match: proteins: Sw:Q9C0D0" FT /protein_id="CAI41067.1" FT /translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPT FT LMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHT FT PPIRRRSKFANLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVLKEIY FT DKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIMDGPD FT PGAPVKLPCLPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQKSGQQGVAQHHHTVLPS FT QIQHQLQYGSHGQHLPSTTGSLPMHPSGCRMIDELNKTLAMTMQRLESSEQRVPCSTSY FT HSSGLHSGDGVTKAGPMGLPEIRQVPTVVIECDDNKENVPHESDYEDSSCLYTREEEEE FT EEDEDDDSSLYTSSLAMKVCRKDSLAIKLSNRPSKRELEEKNILPRQTDEERLELRQQI FT GTKLTRRLSQRPTAEELEQRNILKRK" FT CDS join(complement(Z99495.1:21996..22098),12749876..12750022, FT 12933865..12934124) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-010" FT /standard_name="OTTHUMP00000016046" FT /product="RPEL repeat containing 1" FT /protein_id="CAI41068.1" FT /translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPT FT LMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAGVSLFGDMDEARMGPAVPTLG FT RPLGLELCSLENHGLLKTAPTYTTSAHICSGPSTGGQFSTQGMSPVQGAKRRRVVWLPL FT EGEEFG" FT mRNA join(complement(Z99495.1:22403..22533), FT complement(Z99495.1:21996..22144),12749876..12750022, FT 12933865..12934232) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-010" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BG120957.1" FT mRNA join(complement(Z99495.1:23100..23182), FT complement(Z99495.1:21996..22144),12749876..12750022, FT AL591682.8:115716..115880,AL391385.8:60555..60635, FT AL008729.1:5399..5566,AL008729.1:28695..29016, FT AL008729.1:50696..50943,AL008729.1:52917..53073, FT AL008729.1:95740..99003) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AA364675.1 Em:AA371801.1 FT Em:AA749380.1 Em:AA810810.1 Em:AI864952.1 Em:AU050871.1 FT Em:AU078999.1 Em:AU080890.1 Em:AU171374.1 Em:AW468218.1 FT Em:BE308756.1 Em:BE716223.1 Em:BF197298.1 Em:BF850192.1 FT Em:BF933805.1 Em:BM704008.1 Em:H67505.1 Em:M78996.1 FT Em:R99333.1" FT /note="match: cDNAs: Em:AB051520.1" FT misc_feature 12818782 FT /note="Clone_right_end: RP11-99K24" FT misc_feature 12939781 FT /note="Clone_right_end: RP11-536F8" FT misc_feature 12939882..13101881 FT /note="annotated region of clone" FT mRNA join(AL354680.14:<4631..4986,13053597..13053761, FT AL391385.8:60555..60635,AL008729.1:5399..5566, FT AL008729.1:7679..>7700) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-006" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AI879127.1 Em:BB648839.1" FT CDS join(AL354680.14:<4631..4986,13053597..13053761, FT AL391385.8:60555..60635,AL008729.1:5399..5566, FT AL008729.1:7679..>7700) FT /codon_start=2 FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-006" FT /standard_name="OTTHUMP00000016045" FT /product="RPEL repeat containing 1" FT /protein_id="CAI40398.1" FT /translation="SPFTPFSPLLSFFLSPFFFLFPSLSHSLPTPSLPLPSPFPSPSPV FT REPLPLPSSPFRLSPSPSVSFSLSARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDT FT PYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHTPPIRRRSKFANLGRIFKPWKWRKK FT KSEKFKHTSAALERKISMRQSREELIKRGVLKEIYDKDGELSISNEEDSLENGQSLSSS FT QLSLPALSEMEPVPMPRDPCSYEVLQPSDIMDGPVSEESPSA" FT mRNA join(12957591..12957983,13053597..13053761, FT AL391385.8:60555..60635,AL008729.1:5399..5458) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-011" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AL598323.1" FT CDS join(complement(Z99495.1:21996..22098), FT AL354680.14:4840..4986,13053597..13053761, FT AL391385.8:60555..60635,AL008729.1:5399..5566, FT AL008729.1:28695..29016,AL008729.1:50696..50943, FT AL008729.1:52917..53073,AL008729.1:95740..95803) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /standard_name="OTTHUMP00000016040" FT /product="RPEL repeat containing 1" FT /note="match: proteins: Sw:Q9C0D0" FT /protein_id="CAI40399.1" FT /translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPT FT LMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHT FT PPIRRRSKFANLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVLKEIY FT DKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIMDGPD FT PGAPVKLPCLPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQKSGQQGVAQHHHTVLPS FT QIQHQLQYGSHGQHLPSTTGSLPMHPSGCRMIDELNKTLAMTMQRLESSEQRVPCSTSY FT HSSGLHSGDGVTKAGPMGLPEIRQVPTVVIECDDNKENVPHESDYEDSSCLYTREEEEE FT EEDEDDDSSLYTSSLAMKVCRKDSLAIKLSNRPSKRELEEKNILPRQTDEERLELRQQI FT GTKLTRRLSQRPTAEELEQRNILKRK" FT mRNA join(complement(Z99495.1:23100..23182), FT complement(Z99495.1:21996..22144),AL354680.14:4840..4986, FT 13053597..13053761,AL391385.8:60555..60635, FT AL008729.1:5399..5566,AL008729.1:28695..29016, FT AL008729.1:50696..50943,AL008729.1:52917..53073, FT AL008729.1:95740..99003) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AA364675.1 Em:AA371801.1 FT Em:AA749380.1 Em:AA810810.1 Em:AI864952.1 Em:AU050871.1 FT Em:AU078999.1 Em:AU080890.1 Em:AU171374.1 Em:AW468218.1 FT Em:BE308756.1 Em:BE716223.1 Em:BF197298.1 Em:BF850192.1 FT Em:BF933805.1 Em:BM704008.1 Em:H67505.1 Em:M78996.1 FT Em:R99333.1" FT /note="match: cDNAs: Em:AB051520.1" FT misc_feature 13049112..13049422 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS join(<13053689..13053761,AL391385.8:60555..60635, FT AL008729.1:5399..5566,AL008729.1:7679..7885, FT AL008729.1:53054..53217) FT /codon_start=1 FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-002" FT /standard_name="OTTHUMP00000016041" FT /product="RPEL repeat containing 1" FT /protein_id="CAI40400.1" FT /translation="NLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVL FT KEIYDKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIM FT DGPVSEESPSASESGVLLSQDPSAKPVLLLPPKKPAAFPGDHEETPVKQLPLLKQPPAL FT PPKPTTRIANHLTDWHQAHQVGQRHPLPPWQWAFSSPGSSKRIQSRPGAVAYACNPSTL FT GGRGRWIT" FT mRNA join(<13053689..13053761,AL391385.8:60555..60635, FT AL008729.1:5399..5566,AL008729.1:7679..7885, FT AL008729.1:53054..53284) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-002" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BG538791.1" FT misc_feature 13097882 FT /note="Clone_left_end: RP11-60D15" FT misc_feature 13177353..13305269 FT /note="annotated region of clone" FT mRNA join(AL354680.14:<4631..4986,AL591682.8:115716..115880, FT AL391385.8:60555..60635,13182751..13182918, FT 13185031..>13185052) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-006" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AI879127.1 Em:BB648839.1" FT CDS join(AL354680.14:<4631..4986,AL591682.8:115716..115880, FT AL391385.8:60555..60635,13182751..13182918, FT 13185031..>13185052) FT /codon_start=2 FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-006" FT /standard_name="OTTHUMP00000016045" FT /product="RPEL repeat containing 1" FT /protein_id="CAI95667.1" FT /translation="SPFTPFSPLLSFFLSPFFFLFPSLSHSLPTPSLPLPSPFPSPSPV FT REPLPLPSSPFRLSPSPSVSFSLSARRATLLLPPTLMAASSEDDIDRRPIRRVRSKSDT FT PYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHTPPIRRRSKFANLGRIFKPWKWRKK FT KSEKFKHTSAALERKISMRQSREELIKRGVLKEIYDKDGELSISNEEDSLENGQSLSSS FT QLSLPALSEMEPVPMPRDPCSYEVLQPSDIMDGPVSEESPSA" FT CDS join(<13182751..13182918,13206047..13206368, FT 13228048..13228295,13230269..13230425,13273092..13273147, FT 13278500..13278561,13283654..13283794,13286378..13286454, FT 13287295..13287310) FT /codon_start=3 FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-005" FT /standard_name="OTTHUMP00000016044" FT /product="RPEL repeat containing 1" FT /note="match: proteins: Sw:O75167 Sw:Q8BYK5 Sw:Q96KR7 FT Sw:Q96KR7 Tr:Q91VK6 Tr:Q9H395 Tr:Q9H6X0 Tr:Q9H8W6" FT /protein_id="CAI95668.1" FT /translation="GELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEV FT LQPSDIMDGPDPGAPVKLPCLPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQKSGQQG FT VAQHHHTVLPSQIQHQLQYGSHGQHLPSTTGSLPMHPSGCRMIDELNKTLAMTMQRLES FT SEQRVPCSTSYHSSGLHSGDGVTKAGPMGLPEIRQVPTVVIECDDNKENVPHESDYEDS FT SCLYTREEEEEEEDEDDDSSLYTSSLAMKVCRKDSLAIKLSNRPSKRELEEKNILPRQT FT DEERLELRQQIGTKLTRRLSQRPTAEELEQRNILKPRNEQEEQEEKREIKRRLTRKLSQ FT RPTVEELRERKILIRFSDYVEVADAQDYDRRADKPWTRLTAADKAAIRKELNEFKSTEM FT EVHELSRHLTRFHRP" FT mRNA join(<13182751..13182918,13206047..13206368, FT 13228048..13228295,13230269..13230425,13273092..13273147, FT 13278500..13278561,13283654..13283794,13286378..13286454, FT 13287295..13288075) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-005" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AA283834.1 Em:AA663723.1 FT Em:AA713488.1 Em:AA774985.1 Em:AA809685.1 Em:AA920734.1 FT Em:AA971962.1 Em:AI915842.1 Em:AV043963.2 Em:AV259240.1 FT Em:AW481403.1 Em:AW899219.1 Em:AW977200.1 Em:BB320439.1 FT Em:BB321085.1 Em:BB433870.1 Em:BB833215.1 Em:BE234125.1 FT Em:BE242706.1 Em:BE466263.1 Em:BE649086.1 Em:BE668010.1 FT Em:BF948529.1 Em:BI653656.1 Em:BM031367.1 Em:BQ444141.1 FT Em:H83427.1 Em:H98750.1 Em:H98916.1 Em:N23473.1 Em:N24250.1 FT Em:N24980.1" FT /note="match: cDNAs: Em:AB014580.1 Em:AJ311122.1 FT Em:AK005136.1 Em:BC012871.1" FT mRNA join(13182794..13182918,13206047..13206368, FT 13228087..13228183) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-007" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BM490342.1" FT mRNA join(AL591682.8:19710..20102,AL591682.8:115716..115880, FT AL391385.8:60555..60635,13182751..13182810) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-011" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AL598323.1" FT CDS join(complement(Z99495.1:21996..22098), FT AL354680.14:4840..4986,AL591682.8:115716..115880, FT AL391385.8:60555..60635,13182751..13182918, FT 13206047..13206368,13228048..13228295,13230269..13230425, FT 13273092..13273155) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /standard_name="OTTHUMP00000016040" FT /product="RPEL repeat containing 1" FT /note="match: proteins: Sw:Q9C0D0" FT /protein_id="CAI95669.1" FT /translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPPT FT LMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHT FT PPIRRRSKFANLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVLKEIY FT DKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIMDGPD FT PGAPVKLPCLPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQKSGQQGVAQHHHTVLPS FT QIQHQLQYGSHGQHLPSTTGSLPMHPSGCRMIDELNKTLAMTMQRLESSEQRVPCSTSY FT HSSGLHSGDGVTKAGPMGLPEIRQVPTVVIECDDNKENVPHESDYEDSSCLYTREEEEE FT EEDEDDDSSLYTSSLAMKVCRKDSLAIKLSNRPSKRELEEKNILPRQTDEERLELRQQI FT GTKLTRRLSQRPTAEELEQRNILKRK" FT mRNA join(complement(Z99495.1:23100..23182), FT complement(Z99495.1:21996..22144),AL354680.14:4840..4986, FT AL591682.8:115716..115880,AL391385.8:60555..60635, FT 13182751..13182918,13206047..13206368,13228048..13228295, FT 13230269..13230425,13273092..13276355) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-001" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AA364675.1 Em:AA371801.1 FT Em:AA749380.1 Em:AA810810.1 Em:AI864952.1 Em:AU050871.1 FT Em:AU078999.1 Em:AU080890.1 Em:AU171374.1 Em:AW468218.1 FT Em:BE308756.1 Em:BE716223.1 Em:BF197298.1 Em:BF850192.1 FT Em:BF933805.1 Em:BM704008.1 Em:H67505.1 Em:M78996.1 FT Em:R99333.1" FT /note="match: cDNAs: Em:AB051520.1" FT mRNA complement(join(13305183..13305269,AL589984.7:2001..2150, FT AL589984.7:3361..3490,AL589984.7:4563..4708, FT AL589984.7:13534..13671,AL589984.7:17871..18058, FT AL589984.7:22057..22137,AL589984.7:23750..23869, FT AL589984.7:25259..25494)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-009" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BI523558 Em:BI914228" FT /note="match: cDNAs: Em:AF151073.1" FT mRNA complement(join(13305183..13305269,AL589984.7:2001..2150, FT AL589984.7:3361..3490,AL589984.7:4563..4708, FT AL589984.7:13534..13671,AL589984.7:17871..18058, FT AL589984.7:22057..22137,AL589984.7:23750..23869, FT AL589984.7:25419..25494)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-008" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BF031170 Em:BG573167 Em:BG700678 FT Em:BG762675 Em:BI769274 Em:D81882" FT /note="match: cDNAs: Em:BC007054.1" FT mRNA join(13272444..13272700,13273092..13273147, FT 13278500..13278561,13283654..13283794,13286378..13286429) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-009" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BF078092.1 Em:BI343174.1" FT mRNA join(13272904..13273147,13278500..13278561, FT 13283654..13283794,13286378..13286454,13287295..13287713) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-003" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:AA714844.1 Em:AA932760.1 FT Em:AI269508.1 Em:AI638740.1 Em:AI699898.1 Em:AV607621.1 FT Em:AW025250.1 Em:AW054711.1 Em:AW611538.1 Em:BE388032.1 FT Em:BF026507.1 Em:BF136232.1 Em:BF209835.1 Em:BG077714.1 FT Em:BQ031337.1 Em:BQ224051.1 Em:BQ434462.1 Em:H98030.1" FT /note="match: cDNAs: Em:AB030378.1 Em:BC025873.1" FT mRNA join(13272989..13273147,13278500..13278561, FT 13283654..13284139) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-004" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BE384998.1" FT CDS join(13273009..13273147,13278500..13278561, FT 13283654..13283875) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-004" FT /standard_name="OTTHUMP00000016043" FT /product="RPEL repeat containing 1" FT /protein_id="CAI95670.1" FT /translation="MYLQGPRKLMTQGGYDMVQKLFLDFFRRRLSQRPTAEELEQRNIL FT KPRNEQEEQEEKREIKRRLTRKLSQRPTVEELRERKILIRFSDYVEVADAQDYDRRADK FT PWTRLTAADKVSRGECWRVGGRTVCWVSLGSPLGSV" FT CDS join(13273009..13273147,13278500..13278561, FT 13283654..13283794,13286378..13286454,13287295..13287310) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-003" FT /standard_name="OTTHUMP00000016042" FT /product="RPEL repeat containing 1" FT /protein_id="CAI95671.1" FT /translation="MYLQGPRKLMTQGGYDMVQKLFLDFFRRRLSQRPTAEELEQRNIL FT KPRNEQEEQEEKREIKRRLTRKLSQRPTVEELRERKILIRFSDYVEVADAQDYDRRADK FT PWTRLTAADKAAIRKELNEFKSTEMEVHELSRHLTRFHRP" FT mRNA join(13278234..13278561,13283654..13283778) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-008" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BE755457.1" FT mRNA complement(join(13273623..13273738,13281661..13281785, FT 13283533..13283673)) FT /locus_tag="RP1-257A7.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:H67504.1 Em:R99425.1" FT polyA_site 13288075 FT CDS join(AL591682.8:<115808..115880,AL391385.8:60555..60635, FT 13182751..13182918,13185031..13185237,13230406..13230569) FT /codon_start=1 FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-002" FT /standard_name="OTTHUMP00000016041" FT /product="RPEL repeat containing 1" FT /protein_id="CAI95672.1" FT /translation="NLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVL FT KEIYDKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIM FT DGPVSEESPSASESGVLLSQDPSAKPVLLLPPKKPAAFPGDHEETPVKQLPLLKQPPAL FT PPKPTTRIANHLTDWHQAHQVGQRHPLPPWQWAFSSPGSSKRIQSRPGAVAYACNPSTL FT GGRGRWIT" FT mRNA join(AL591682.8:<115808..115880,AL391385.8:60555..60635, FT 13182751..13182918,13185031..13185237,13230406..13230636) FT /gene="RPEL" FT /locus_tag="RP1-257A7.1-002" FT /product="RPEL repeat containing 1" FT /note="match: ESTs: Em:BG538791.1" FT polyA_site complement(13305183) FT polyA_site complement(13305185) FT polyA_signal complement(13305198..13305203) FT misc_feature 13305270..13385656 FT /note="annotated region of clone" FT mRNA complement(join(13358062..13365894, FT AL591969.4:22486..22713)) FT /gene="GFOD1" FT /locus_tag="RP1-49A18.1-002" FT /product="glucose-fructose oxidoreductase domain containing FT 1" FT /note="match: cDNAs: Em:AK027010.1" FT CDS complement(join(13305333..13305419,13306630..13306759, FT 13307832..13307977,13316803..13316940,13321140..13321327, FT 13325326..13325406,13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-008" FT /standard_name="OTTHUMP00000043410" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21569.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTF FT SQRFPLPSMYRALVWKVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQ FT AEVYLRMYQLESGKLPRSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLN FT TKYRDSLPQLPKAFEQYLNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQR FT VWDKVVSGSCKILVFVAVEILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDL FT WHKHCGTPVHSS" FT CDS complement(join(<13306677..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13325326..13325406, FT 13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-004" FT /standard_name="OTTHUMP00000043407" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21572.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTF FT SQRFPLPSMYRALVWKVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQ FT AEVYLRMYQLESGKLPRSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITRRFVNQLN FT TKYRDSLPQLPKAFEQYLNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQR FT VWDKVVSGSCKILVFVAVEILLTFKIK" FT CDS complement(join(<13306630..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-005" FT /standard_name="OTTHUMP00000043408" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21570.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLGILPPHHE FT SHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLPRSPSFPLEPDD FT EVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQYLNLEDGRLLT FT HLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKILVFVAVEILLTFKIK FT VMALNSAEKITKFLEN" FT CDS complement(join(<13306723..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-006" FT /standard_name="OTTHUMP00000043409" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21571.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLGILPPHHE FT SHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLPRSPSFPLEPDD FT EVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQYLNLEDGRLLT FT HLRMCSAAPKLPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCKI" FT CDS complement(join(<13307832..13307977,13316803..13316940, FT 13321140..13321327,13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-003" FT /standard_name="OTTHUMP00000043406" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21573.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLGILPPHHE FT SHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLPRSPSFPLEPDD FT EVFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQYLNLEDGRLLT FT HLRMCSAAPKLPYDLWFKRCFAGCLPESSLQ" FT CDS complement(join(<13316914..13316940,13321140..13321327, FT 13325326..13325406,13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-001" FT /standard_name="OTTHUMP00000043404" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21575.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTF FT SQRFPLPSMYRALVWKVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQ FT AEVYLRMYQLESGKLPRSPSFPLEPDDEVFLA" FT CDS complement(join(<13316853..13316940,13321140..13321327, FT 13325326..13325406,13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-002" FT /standard_name="OTTHUMP00000043405" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21576.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTF FT SQRFPLPSMYRALVWKVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQ FT AEVYLRMYQLESGKLPRSPSFPLEPDDEVFLAIAKAMEEMVEDSVDCYWITR" FT CDS complement(join(<13316930..13316940,13321140..13321327, FT 13325326..13325406,13327019..13327130)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-011" FT /standard_name="OTTHUMP00000043411" FT /product="TBC1 domain family, member 7" FT /protein_id="CAI21574.1" FT /translation="MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTF FT SQRFPLPSMYRALVWKVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQ FT AEVYLRMYQLESGKLPRSPSFPLEPD" FT mRNA complement(join(<13307832..13307977,13316803..13316940, FT 13321140..13321327,13327019..13327195,13327910..13328050)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-003" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BE891596" FT mRNA complement(join(<13316914..13316940,13321140..13321327, FT 13325326..13325406,13327019..13327138,13328065..13328362)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-001" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:AW978595" FT mRNA complement(join(<13316853..13316940,13321140..13321327, FT 13325326..13325406,13327019..13327195,13328065..13328362)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-002" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BI860507 Em:BI862316" FT mRNA complement(join(<13306630..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13327019..13327138, FT 13328528..13328763)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-010" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BF184326 Em:BI523558" FT mRNA complement(join(<13316930..13316940,13321140..13321327, FT 13325326..13325406,13327019..13327195,13328528..13328763)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-011" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BG504676" FT mRNA complement(join(AL008729.1:127831..127917, FT 13305270..13305419,13306630..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13325326..13325406, FT 13327019..13327138,13328528..13328763)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-009" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BI523558 Em:BI914228" FT /note="match: cDNAs: Em:AF151073.1" FT mRNA complement(join(<13306677..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13325326..13325406, FT 13327019..13327138,13328548..13328763)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-004" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:AL519553 Em:BE783877 Em:BF027435 FT Em:BG740563 Em:BI850881" FT mRNA complement(join(<13306630..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13327019..13327138, FT 13328548..13328763)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-005" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BE383900 Em:BI912590 Em:H11688" FT mRNA complement(join(<13306723..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13327019..13327195, FT 13328688..13328763)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-006" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BG534375" FT mRNA complement(join(AL008729.1:127831..127917, FT 13305270..13305419,13306630..13306759,13307832..13307977, FT 13316803..13316940,13321140..13321327,13325326..13325406, FT 13327019..13327138,13328688..13328763)) FT /gene="TBC1D7" FT /locus_tag="RP1-49A18.2-008" FT /product="TBC1 domain family, member 7" FT /note="match: ESTs: Em:BF031170 Em:BG573167 Em:BG700678 FT Em:BG762675 Em:BI769274 Em:D81882" FT /note="match: cDNAs: Em:BC007054.1" FT mRNA complement(join(13358062..13365894, FT AL583828.4:42328..43245)) FT /gene="GFOD1" FT /locus_tag="RP1-49A18.1-001" FT /product="glucose-fructose oxidoreductase domain containing FT 1" FT /note="match: ESTs: Em:AI073974 Em:AI365408 Em:AI379222 FT Em:AI638486 Em:AI762546 Em:AL597577 Em:BB664906 Em:BE502021 FT Em:BI756034 Em:BI771617" FT /note="match: cDNAs: Em:AK000337.1 Em:AK017684.1 FT Em:AK055131.1 Em:BC013623.1" FT CDS complement(join(13364975..13365894, FT AL583828.4:42328..42580)) FT /gene="GFOD1" FT /locus_tag="RP1-49A18.1-001" FT /standard_name="OTTHUMP00000016050" FT /product="glucose-fructose oxidoreductase domain containing FT 1" FT /note="match: proteins: Tr:Q9CYH5 Tr:Q9NXC2" FT /protein_id="CAI21577.1" FT /translation="MLPGVGVFGTSLTARVIIPLLKDEGFAVKALWGRTQEEAEELAKE FT MSVPFYTSRIDEVLLHQDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTATPLDAFRM FT TSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGEPLVCEVQVHGGSLLGKKYNWS FT CDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCT FT FQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLYGQRNSAPEQELLVQD FT ATPVSNSLLPEKAFSDIPSPYLRGTIKMMQAVRQAFQDQDDRRTWDGRPLTMAATFDDC FT LYALCVVDTIKRSSQTGEWQNIAIMTEEPELSPAYLISEAMRRSRMSLYC" FT polyA_site complement(13358062) FT polyA_signal complement(13358081..13358086) FT CDS complement(13364975..13365838) FT /gene="GFOD1" FT /locus_tag="RP1-49A18.1-002" FT /standard_name="OTTHUMP00000016051" FT /product="glucose-fructose oxidoreductase domain containing FT 1" FT /protein_id="CAI21578.1" FT /translation="MTSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGEPLVCEV FT QVHGGSLLGKKYNWSCDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTD FT HIKGIRQITSDDFCTFQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLY FT GQRNSAPEQELLVQDATPVSNSLLPEKAFSDIPSPYLRGTIKMMQAVRQAFQDQDDRRT FT WDGRPLTMAATFDDCLYALCVVDTIKRSSQTGEWQNIAIMTEEPELSPAYLISEAMRRS FT RMSLYC" FT misc_feature 13379870..13380114 FT /note="Sequence from overlapping clone RP11-22E19 FT (AL591969). Assembly confirmed by restriction digest" FT misc_feature 13385657..13446542 FT /note="annotated region of clone" FT misc_feature 13387656 FT /note="Clone_right_end: RP1-49A18" FT mRNA complement(join(AL589984.7:54793..62625, FT 13408142..13408369)) FT /gene="GFOD1" FT /locus_tag="RP1-49A18.1-002" FT /product="glucose-fructose oxidoreductase domain containing FT 1" FT /note="match: cDNAs: Em:AK027010.1" FT misc_feature 13444543 FT /note="Clone_left_end: RP11-501I19" FT misc_feature 13446543..13569201 FT /note="annotated region of clone" FT misc_feature 13458920..13459283 FT /note="Sequence confirmed by AC010305 sequenced by JGI and FT SHGC" FT misc_feature 13463100..13463300 FT /note="Sequence confirmed by AC010305 sequenced by JGI and FT SHGC" FT polyA_site complement(13469507) FT polyA_signal complement(13469531..13469536) FT CDS complement(13470102..13470512) FT /gene="RP11-501I19.1" FT /locus_tag="RP11-501I19.1-001" FT /standard_name="OTTHUMP00000016049" FT /product="novel protein (ortholog of human ADG-90)" FT /protein_id="CAI14821.1" FT /translation="MGDSRRDVLHEPAIALLSSPQTQSRLQIDAFIARRCWGSQWDITG FT YIHQQDFPTAVFIGFSNEFNICIPHPFTEWLQCVRKYSQSWGVRKGQRHIRYGMCSERT FT HHLSRTYSSLLEREEKLAFYGVLTMCQIWCET" FT misc_feature 13484930..13485923 FT /note="Sequence confirmed by AC010305 sequenced by JGI and FT SHGC" FT misc_feature 13485924..13485937 FT /note="Sequence from AC010305 sequenced by JGI and SHGC" FT misc_feature 13485938..13486729 FT /note="Sequence confirmed by AC010305 sequenced by JGI and FT SHGC" FT mRNA complement(join(13469507..13470862,13486243..13486415)) FT /gene="RP11-501I19.1" FT /locus_tag="RP11-501I19.1-001" FT /product="novel protein (ortholog of human ADG-90)" FT /note="match: ESTs: Em:BI756034 Em:BI771617" FT /note="match: cDNAs: Em:AF264036.1 Em:BC009205.1" FT mRNA join(13486526..13486685,13486913..13487084) FT /locus_tag="RP11-501I19.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:H03893 Em:R27426" FT mRNA complement(join(AL589984.7:54793..62625, FT 13486870..13487787)) FT /gene="GFOD1" FT /locus_tag="RP1-49A18.1-001" FT /product="glucose-fructose oxidoreductase domain containing FT 1" FT /note="match: ESTs: Em:AI073974 Em:AI365408 Em:AI379222 FT Em:AI638486 Em:AI762546 Em:AL597577 Em:BB664906 Em:BE502021 FT Em:BI756034 Em:BI771617" FT /note="match: cDNAs: Em:AK000337.1 Em:AK017684.1 FT Em:AK055131.1 Em:BC013623.1" FT CDS complement(join(AL589984.7:61706..62625, FT 13486870..13487122)) FT /gene="GFOD1" FT /locus_tag="RP1-49A18.1-001" FT /standard_name="OTTHUMP00000016050" FT /product="glucose-fructose oxidoreductase domain containing FT 1" FT /note="match: proteins: Tr:Q9CYH5 Tr:Q9NXC2" FT /protein_id="CAI14822.1" FT /translation="MLPGVGVFGTSLTARVIIPLLKDEGFAVKALWGRTQEEAEELAKE FT MSVPFYTSRIDEVLLHQDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTATPLDAFRM FT TSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGEPLVCEVQVHGGSLLGKKYNWS FT CDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCT FT FQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLYGQRNSAPEQELLVQD FT ATPVSNSLLPEKAFSDIPSPYLRGTIKMMQAVRQAFQDQDDRRTWDGRPLTMAATFDDC FT LYALCVVDTIKRSSQTGEWQNIAIMTEEPELSPAYLISEAMRRSRMSLYC" FT CDS 13521498..13522277 FT /pseudo FT /locus_tag="RP11-501I19.4-001" FT /product="ribosomal protein s4x (Rps4x) pseudogene" FT /note="match: proteins: Em:AAB60453 Em:CAB92099 Sw:P62701 FT Sw:P62702 Sw:Q90YS0 Tr:P62702 Tr:Q545X8 Tr:Q545X8 Tr:Q545X8 FT Tr:Q76MY1 Tr:Q76N24 Tr:Q95VH9 Tr:Q9TV48 Tr:Q9TV50 FT Tr:Q9VI02" FT misc_feature 13567102 FT /note="Clone_left_end: RP1-223E5" FT misc_feature 13569202..13633053 FT /note="annotated region of clone" FT mRNA join(13574833..13574856,13579683..13579841, FT 13584308..13584457,13588563..13588696,13591901..13592126, FT 13595709..13595796,13597195..13597248,13599264..13599387, FT 13601066..13601181,13604708..13605971) FT /gene="SIRT5" FT /locus_tag="RP1-223E5.2-001" FT /product="sirtuin (silent mating type information FT regulation 2 homolog) 5 (S. cerevisiae)" FT /note="match: ESTs: Em:AI269430 Em:AI620794 Em:BF508000" FT /note="match: cDNAs: Em:AJ420496.1 Em:AK000355.1" FT mRNA join(13574875..13574976,13579683..13579841, FT 13584308..13584457,13588563..13588696,13591901..13592126, FT 13595709..13595796,13597195..13597248,13599264..13599387, FT 13601066..13601181,13612022..13612524) FT /gene="SIRT5" FT /locus_tag="RP1-223E5.2-002" FT /product="sirtuin (silent mating type information FT regulation 2 homolog) 5 (S. cerevisiae)" FT /note="match: ESTs: Em:AL522138 Em:AL557205 Em:BE751072 FT Em:BE753859 Em:BG911423 Em:BI062850 Em:BI523790 Em:BI537654 FT Em:T48877" FT /note="match: cDNAs: Em:AF083110.1 Em:BC000126.1" FT CDS join(13584343..13584457,13588563..13588696, FT 13591901..13592126,13595709..13595796,13597195..13597248, FT 13599264..13599387,13601066..13601181,13604708..13604750) FT /gene="SIRT5" FT /locus_tag="RP1-223E5.2-001" FT /standard_name="OTTHUMP00000016054" FT /product="sirtuin (silent mating type information FT regulation 2 homolog) 5 (S. cerevisiae)" FT /note="match: proteins: Sw:Q9NXA8" FT /protein_id="CAI19837.1" FT /translation="MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRK FT FFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHY FT RREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFK FT TRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVW FT FGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPA FT TNRFSHLISISSLIIIKN" FT CDS join(13584343..13584457,13588563..13588696, FT 13591901..13592126,13595709..13595796,13597195..13597248, FT 13599264..13599387,13601066..13601181,13612022..13612097) FT /gene="SIRT5" FT /locus_tag="RP1-223E5.2-002" FT /standard_name="OTTHUMP00000016055" FT /product="sirtuin (silent mating type information FT regulation 2 homolog) 5 (S. cerevisiae)" FT /note="match: proteins: Sw:Q9NXA8" FT /protein_id="CAI19838.1" FT /translation="MRPLQIVPSRLISQLYCGLKPPASTRNQICLKMARPSSSMADFRK FT FFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHY FT RREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFK FT TRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVW FT FGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPA FT TNRFRFHFQGPCGTTLPEALACHENETVS" FT polyA_signal 13605943..13605948 FT polyA_site 13605971 FT polyA_signal 13612500..13612505 FT polyA_site 13612521 FT mRNA join(13615559..13615856,13615944..13616004, FT 13616695..13616753,13618002..13618033,13618290..13618371, FT 13620440..13620561,13620640..13620717,13620986..13621437) FT /gene="NOL7" FT /locus_tag="RP1-223E5.1-001" FT /product="nucleolar protein 7, 27kDa" FT /note="match: ESTs: Em:AA227639 Em:AA747030 Em:AI658772 FT Em:AV713485 Em:AW149486 Em:BF683214 Em:BG036534 Em:BG036983 FT Em:BG505409 Em:BG618532 Em:BI713051 Em:BM352337 Em:N63209" FT /note="match: cDNAs: Em:AB041566.1 Em:AF130102.1 FT Em:AF172066.3 Em:AK008670.1 Em:AK019972.1 Em:AL050299.1" FT CDS join(13615591..13615856,13615944..13616004, FT 13616695..13616753,13618002..13618033,13618290..13618371, FT 13620440..13620561,13620640..13620717,13620986..13621059) FT /gene="NOL7" FT /locus_tag="RP1-223E5.1-001" FT /standard_name="OTTHUMP00000016052" FT /product="nucleolar protein 7, 27kDa" FT /note="match: proteins: Sw:Q9UMY1" FT /protein_id="CAI19839.1" FT /translation="MVQLRPRASRAPASAEAMVDEGQLASEEEEAEHGLLLGQPSSGAA FT AEPLEEDEEGDDEFDDEAPEELTFASAQAEAREEERRVRETVRRDKTLLKEKRKRREEL FT FIEQKKRKLLPDTILEKLTTASQTNIKKSPGKVKEVNLQKKNEDCEKGNDSKKVKVQKV FT QSVSQNKSYLAVRLKDQDLRDSRQQAAQAFIHNSLYGPGTNRTTVNKFLSLANKRLPVK FT RAAVQFLNNAWGIQKKQNAKRFKRRWMVRKMKTKK" FT CDS join(<13615779..13615856,13615944..13616004, FT 13616695..13616753,13618002..13618053) FT /codon_start=2 FT /gene="NOL7" FT /locus_tag="RP1-223E5.1-002" FT /standard_name="OTTHUMP00000016053" FT /product="nucleolar protein 7, 27kDa" FT /protein_id="CAI19840.1" FT /translation="PEELTFASAQAEAREEERRVRETVRRDKTLLKEKRKRREELFIEQ FT KKRKLLPDTILEKLTTASQTNIKKSPGKVKEGMTILI" FT mRNA join(<13615779..13615856,13615944..13616004, FT 13616695..13616753,13618002..13618449) FT /gene="NOL7" FT /locus_tag="RP1-223E5.1-002" FT /product="nucleolar protein 7, 27kDa" FT /note="match: ESTs: Em:AV688097 Em:AV689230" FT mRNA join(13615821..13615856,13615944..13616004, FT 13616695..13616753,13618002..13618033,13618290..13618371, FT 13620440..13620561,13620640..13620717,13620986..13621088, FT 13632625..13632971) FT /gene="NOL7" FT /locus_tag="RP1-223E5.1-003" FT /product="nucleolar protein 7, 27kDa" FT /note="match: ESTs: Em:AA024759 Em:AA032235 Em:AW966635" FT mRNA join(Z93020.1:46844..47473,Z93020.1:61512..61623, FT Z93020.1:99576..99628,Z93020.1:101132..101299, FT Z93020.1:105727..105749,Z93020.1:113679..113863, FT Z93020.1:115817..115929,Z93020.1:117101..117209, FT Z93020.1:118655..118845,Z93020.1:120453..120600, FT Z93020.1:123856..123977,complement(13632602..13632753), FT complement(13625885..13625996), FT complement(13621730..13622724)) FT /gene="RANBP9" FT /locus_tag="RP1-223E5.3-001" FT /product="RAN binding protein 9" FT /note="match: ESTs: Em:AA427170 Em:AA561345 Em:AI573480 FT Em:AU136922 Em:AV688209 Em:AV689329 Em:AW141887 Em:AW410119 FT Em:AW961549 Em:BB146543 Em:BG253419 Em:BG323522 Em:BI333744 FT Em:BI334942 Em:BI523585 Em:BI658163" FT /note="match: cDNAs: Em:AB008515.1 Em:AB047620.1 FT Em:AB055311.1 Em:AF006465.1 Em:AF306510.1" FT CDS join(Z93020.1:46903..47473,Z93020.1:61512..61623, FT Z93020.1:99576..99628,Z93020.1:101132..101299, FT Z93020.1:105727..105749,Z93020.1:113679..113863, FT Z93020.1:115817..115929,Z93020.1:117101..117209, FT Z93020.1:118655..118845,Z93020.1:120453..120600, FT Z93020.1:123856..123977,complement(13632602..13632753), FT complement(13625885..13625996), FT complement(13622594..13622724)) FT /gene="RANBP9" FT /locus_tag="RP1-223E5.3-001" FT /standard_name="OTTHUMP00000017269" FT /product="RAN binding protein 9" FT /note="match: proteins: Sw:Q96S59 Sw:Q96S59 Tr:Q9P264 FT Tr:Q9PTY5" FT /protein_id="CAI19841.1" FT /translation="MSGQPPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGS FT SPAGSPGGGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPA FT PPGLAAGPGPAGGAPTPALVAGSSAAAPFPHGDSALNEQEKELQRRLKRLYPAVDEQET FT PLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIV FT SKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVI FT GCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIED FT YMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHGYCATAEAFARSTDQTVLE FT ELASIKNRQRIQKLVLAGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMVNGTDS FT EVRCLGGRSPKSQDSYPVSPRPFSSPSMSPSHGMNIHNLASGKGSTAHFSGFESCSNGV FT ISNKAHQSYCHSNKHQSSNLNVPELNSINMSRSQQVNNFTSNDVDMETDHYSNGVGETS FT SNGFLNGSSKHDHEMEDCDTEMEVDSSQLRRQLCGGSQAAIERMIHFGRELQAMSEQLR FT RDCGKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQ FT PPLALAMGQATQCLGLMARSGIGSCAFATVEDYLH" FT polyA_signal 13621412..13621417 FT polyA_site 13621437 FT polyA_site complement(13621730) FT polyA_signal complement(13621746..13621751) FT mRNA complement(join(13622565..13622724,13625885..13625996, FT 13632602..13632987)) FT /gene="RANBP9" FT /locus_tag="RP1-223E5.3-002" FT /product="RAN binding protein 9" FT /note="match: ESTs: Em:BE150520 Em:BE150675 Em:BE182687 FT Em:BE706450 Em:BE706455 Em:BE706456 Em:R20838" FT misc_feature 13632854 FT /note="Clone_left_end: RP3-503G16" FT misc_feature complement(13633054..13758639) FT /note="annotated region of clone" FT mRNA complement(join(AL441883.11:52629..53623, FT AL441883.11:56784..56895,AL441883.11:63501..63652, FT 13634663..13634784,13638040..13638187,13639795..13639985, FT 13641431..13641539,13642711..13642823,13644777..13644961, FT 13652891..13652913,13657341..13657508,13659012..13659064, FT 13697017..13697128,13711167..13711796)) FT /gene="RANBP9" FT /locus_tag="RP1-223E5.3-001" FT /product="RAN binding protein 9" FT /note="match: ESTs: Em:AA427170 Em:AA561345 Em:AI573480 FT Em:AU136922 Em:AV688209 Em:AV689329 Em:AW141887 Em:AW410119 FT Em:AW961549 Em:BB146543 Em:BG253419 Em:BG323522 Em:BI333744 FT Em:BI334942 Em:BI523585 Em:BI658163" FT /note="match: cDNAs: Em:AB008515.1 Em:AB047620.1 FT Em:AB055311.1 Em:AF006465.1 Em:AF306510.1" FT CDS complement(join(AL441883.11:53493..53623, FT AL441883.11:56784..56895,AL441883.11:63501..63652, FT 13634663..13634784,13638040..13638187,13639795..13639985, FT 13641431..13641539,13642711..13642823,13644777..13644961, FT 13652891..13652913,13657341..13657508,13659012..13659064, FT 13697017..13697128,13711167..13711737)) FT /gene="RANBP9" FT /locus_tag="RP1-223E5.3-001" FT /standard_name="OTTHUMP00000017269" FT /product="RAN binding protein 9" FT /note="match: proteins: Sw:Q96S59 Sw:Q96S59 Tr:Q9P264 FT Tr:Q9PTY5" FT /protein_id="CAI21594.1" FT /translation="MSGQPPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGS FT SPAGSPGGGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPA FT PPGLAAGPGPAGGAPTPALVAGSSAAAPFPHGDSALNEQEKELQRRLKRLYPAVDEQET FT PLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIV FT SKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVI FT GCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIED FT YMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHGYCATAEAFARSTDQTVLE FT ELASIKNRQRIQKLVLAGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEMVNGTDS FT EVRCLGGRSPKSQDSYPVSPRPFSSPSMSPSHGMNIHNLASGKGSTAHFSGFESCSNGV FT ISNKAHQSYCHSNKHQSSNLNVPELNSINMSRSQQVNNFTSNDVDMETDHYSNGVGETS FT SNGFLNGSSKHDHEMEDCDTEMEVDSSQLRRQLCGGSQAAIERMIHFGRELQAMSEQLR FT RDCGKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHNLPKQ FT PPLALAMGQATQCLGLMARSGIGSCAFATVEDYLH" FT misc_feature 13758640..13882369 FT /note="annotated region of clone" FT polyA_site complement(13791020) FT polyA_signal complement(13791037..13791042) FT mRNA complement(join(13791020..13791096,13792110..13792224, FT 13794126..13794179,13799065..13799136,13800573..13800614, FT 13801520..13801621,13802475..13802578,13807157..13807276, FT 13814247..13814800)) FT /gene="CCDC90A" FT /locus_tag="RP3-500L14.1-001" FT /product="coiled-coil domain containing 90A" FT /note="match: ESTs: Em:AA305047 Em:BE217798 Em:BE218279 FT Em:BG163607 Em:BG773627 Em:BI113704 Em:BI667986" FT /note="match: cDNAs: Em:AK018089.1 Em:BC008234.1 FT Em:BC016850.1" FT CDS complement(join(13791041..13791096,13792110..13792224, FT 13794126..13794179,13799065..13799136,13800573..13800614, FT 13801520..13801621,13802475..13802578,13807157..13807276, FT 13814247..13814661)) FT /gene="CCDC90A" FT /locus_tag="RP3-500L14.1-001" FT /standard_name="OTTHUMP00000016056" FT /product="coiled-coil domain containing 90A" FT /note="match: proteins: Tr:Q96AQ8 Tr:Q96JS7" FT /protein_id="CAI21582.1" FT /translation="MDCGSVGGQRTQRLPGRQRLLFLPVGLSGRPGGSETSARRCLSAL FT SDGLGALRPRAPAARGGVSRASPLLLLLLVPSPRLAAAAPRRQLGDWERSRLGYAAPPA FT GRSSAWRCSPGVAAAAGALPQYHGPAPALVSCRRELSLSAGSLQLERKRRDFTSSGSRK FT LYFDTHALVCLLEDNGFATQQAEIIVSALVKILEANMDIVYKDMVTKMQQEITFQQVMS FT QIANVKKDMIILEKSEFSALRAENEKIKLELHQLKQQVMDEVIKVRTDTKLDFNLEKSR FT VKELYSLNEKKLLELRTEIVALHAQQDRALTQTDRKIETEVAGLKTMLESHKLDNIKYL FT AGSIFTCLTVALGFYRLWI" FT mRNA complement(join(13791020..13791096,13792110..13792224, FT 13794126..13794179,13799065..13799136,13800573..13800614, FT 13801520..13801621,13802475..13802578,13803962..13804547, FT 13807157..13807276,13814247..13814800)) FT /gene="CCDC90A" FT /locus_tag="RP3-500L14.1-002" FT /product="coiled-coil domain containing 90A" FT /note="match: cDNAs: Em:AK024611.1" FT misc_feature 13822360..13822361 FT /note="Single clone region. Short insert library of single FT pUC clone" FT misc_feature 13882269 FT /note="Clone_right_end: RP3-500L14" FT misc_feature 13882370..13991082 FT /note="annotated region of clone" FT mRNA join(13925105..13925254,13974441..13974595, FT 13977140..13980240) FT /locus_tag="RP11-127P7.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI370991 Em:AI912104 Em:AW054717 FT Em:AW731636 Em:BE504513 Em:BF196765 Em:BI462111 Em:BI464751 FT Em:BI544248 Em:BI545763 Em:BI562174" FT misc_feature 13925201 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 220bp by restriction digest data" FT mRNA join(13925205..13925254,13977140..13977837) FT /locus_tag="RP11-127P7.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BI552264" FT mRNA join(13925434..13925597,13977140..13977598) FT /locus_tag="RP11-127P7.1-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BI545437" FT CDS 13949326..13949697 FT /pseudo FT /locus_tag="RP11-127P7.2-001" FT /product="mitochondrial ribosomal protein L35 (MRPL35) FT pseudogene" FT /note="match: proteins: Sw:Q9NZE8" FT polyA_signal 13980214..13980219 FT polyA_site 13980240 FT misc_feature 13990883 FT /note="Clone_left_end: RP3-380E11" FT misc_feature 13991083..14122429 FT /note="annotated region of clone" FT mRNA join(14005151..14005211,14006808..14007132) FT /locus_tag="RP3-380E11.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI216311" FT polyA_site 14007132 FT mRNA join(14117872..14118079,14118181..14118296, FT AL133259.24:9422..9650,AL133259.24:11551..11657, FT AL133259.24:13010..14820) FT /gene="CD83" FT /locus_tag="RP1-258E1.1-001" FT /product="CD83 molecule" FT /note="match: ESTs: Em:AA101749 Em:AI093950 Em:AI199307 FT Em:AI344754 Em:AI357087 Em:AI718790 Em:AI815601 Em:AL552104 FT Em:AW403650 Em:AW403660 Em:AW511996 Em:BE266731 Em:BE622272 FT Em:BE883894 Em:BG478272 Em:BG703499 Em:BG705577 Em:BG740387 FT Em:BI758803 Em:BI762179 Em:BI769419 Em:BI833868 Em:BI915668 FT Em:BI916827" FT /note="match: cDNAs: Em:AJ245551.1 Em:BC004351.1 FT Em:Z11697.1" FT CDS join(14118043..14118079,14118181..14118296, FT AL133259.24:9422..9650,AL133259.24:11551..11657, FT AL133259.24:13010..13138) FT /gene="CD83" FT /locus_tag="RP1-258E1.1-001" FT /standard_name="OTTHUMP00000016057" FT /product="CD83 molecule" FT /note="match: proteins: Sw:Q01151 Tr:O88324" FT /protein_id="CAI20374.1" FT /translation="MSRGLQLLLLSCAYSLAPATPEVKVACSEDVDLPCTAPWDPQVPY FT TVSWVKLLEGGEERMETPQEDHLRGQHYHQKGQNGSFDAPNERPYSLKIRNTTSCNSGT FT YRCTLQDPDGQRNLSGKVILRVTGCPAQRKEETFKKYRAEIVLLLALVIFYLTLIIFTC FT KFARLQSIFPDFSKAGMERAFLPVTSPNKHLGLVTPHKTELV" FT misc_feature 14122430..14195308 FT /note="annotated region of clone" FT misc_feature 14129002 FT /note="Clone_left_end: RP11-359N11" FT polyA_signal 14137088..14137093 FT polyA_signal 14137105..14137110 FT polyA_site 14137149 FT misc_feature 14195208 FT /note="Clone_right_end: RP1-258E1" FT mRNA join(AL022396.1:126890..127097,AL022396.1:127199..127314, FT 14131751..14131979,14133880..14133986,14135339..14137149) FT /gene="CD83" FT /locus_tag="RP1-258E1.1-001" FT /product="CD83 molecule" FT /note="match: ESTs: Em:AA101749 Em:AI093950 Em:AI199307 FT Em:AI344754 Em:AI357087 Em:AI718790 Em:AI815601 Em:AL552104 FT Em:AW403650 Em:AW403660 Em:AW511996 Em:BE266731 Em:BE622272 FT Em:BE883894 Em:BG478272 Em:BG703499 Em:BG705577 Em:BG740387 FT Em:BI758803 Em:BI762179 Em:BI769419 Em:BI833868 Em:BI915668 FT Em:BI916827" FT /note="match: cDNAs: Em:AJ245551.1 Em:BC004351.1 FT Em:Z11697.1" FT CDS join(AL022396.1:127061..127097,AL022396.1:127199..127314, FT 14131751..14131979,14133880..14133986,14135339..14135467) FT /gene="CD83" FT /locus_tag="RP1-258E1.1-001" FT /standard_name="OTTHUMP00000016057" FT /product="CD83 molecule" FT /note="match: proteins: Sw:Q01151 Tr:O88324" FT /protein_id="CAB96723.2" FT /translation="MSRGLQLLLLSCAYSLAPATPEVKVACSEDVDLPCTAPWDPQVPY FT TVSWVKLLEGGEERMETPQEDHLRGQHYHQKGQNGSFDAPNERPYSLKIRNTTSCNSGT FT YRCTLQDPDGQRNLSGKVILRVTGCPAQRKEETFKKYRAEIVLLLALVIFYLTLIIFTC FT KFARLQSIFPDFSKAGMERAFLPVTSPNKHLGLVTPHKTELV" FT misc_feature 14195309..14314624 FT /note="annotated region of clone" FT mRNA complement(join(14230006..14230432,14231759..14231801)) FT /locus_tag="RP11-359N11.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW195018" FT mRNA complement(join(14280358..14283419,14285287..14285376)) FT /locus_tag="RP11-359N11.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK056826.1" FT misc_feature 14314524 FT /note="Clone_right_end: RP11-359N11" FT misc_feature 14333753 FT /note="Clone_left_end: RP3-448I9" FT misc_feature complement(14333953..14428223) FT /note="annotated region of clone" FT mRNA join(14394557..14394675,14395284..14395502, FT 14404454..14404520) FT /locus_tag="RP3-448I9.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA757019" FT mRNA complement(join(14391462..14391735,14392052..14392102, FT 14392535..14392613,14393435..14393519)) FT /locus_tag="RP3-448I9.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA398099" FT misc_feature complement(14334052) FT /note="Clone_right_end: RP3-365E2" FT misc_feature 14565854..14598448 FT /note="annotated region of clone" FT misc_feature 14598249 FT /note="Clone_left_end: RP11-27F12" FT mRNA join(AL109914.16:121909..121973, FT complement(14597745..14597826)) FT /locus_tag="RP11-330A16.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA237093" FT misc_feature complement(14598449..14721829) FT /note="annotated region of clone" FT misc_feature complement(14634523..14634546) FT /note="2 of 12 templates have 24Ts, 8 of 12 have 23Ts, 2 of FT 12 have 22Ts" FT misc_feature complement(14627133..14627140) FT /note="Tandem repeat. Forced join. Approximately 1kb FT missing from this repeat according to restriction digest FT data" FT mRNA complement(join(AL359994.7:31992..32073, FT 14599857..14599921)) FT /locus_tag="RP11-330A16.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA237093" FT misc_feature complement(14598548) FT /note="Clone_right_end: RP3-514K20" FT misc_feature 14836616 FT /note="Clone_left_end: RP11-146I2" FT misc_feature 14836816..14993330 FT /note="annotated region of clone" FT mRNA join(14841455..14841582,14871911..14871959) FT /locus_tag="RP11-146I2.2-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:AL110189.1" FT mRNA complement(join(14977019..14977549,AL050335.32:4417..4476, FT AL050335.32:86635..86832,AL050335.32:96777..97004)) FT /locus_tag="RP11-146I2.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA428468 Em:BG192758" FT misc_feature 14993131 FT /note="Clone_left_end: RP1-190J20" FT misc_feature 14993331..15182547 FT /note="annotated region of clone" FT misc_feature 15021827 FT /note="Clone_right_end: RP11-146I2" FT misc_feature 15049081 FT /note="Clone_left_end: RP11-486C8" FT misc_feature 15056103..15056135 FT /note="Weak data. Overall assembly consistent with FT restriction digest" FT mRNA complement(join(AL138720.19:140304..140834, FT 14997647..14997706,15079865..15080062,15090007..15090234)) FT /locus_tag="RP11-146I2.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA428468 Em:BG192758" FT CDS complement(15103177..15104442) FT /pseudo FT /locus_tag="RP1-190J20.2-001" FT /product="ribosomal protein L6 (RPL6) pseudogene" FT /note="match: proteins: Sw:P05739 Sw:P21533 Sw:P34091 FT Sw:P47911 Sw:P47991 Sw:Q02326 Sw:Q02878 Tr:Q9SMI5 Tr:Q9V9W2 FT Tr:Q9XSV0" FT misc_feature 15182447 FT /note="Clone_right_end: RP1-190J20" FT misc_feature 15187468..15187504 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 15187988..15188007 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 15195457 FT /note="Clone_left_end: RP11-560J1" FT misc_feature 15199457..15326591 FT /note="annotated region of clone" FT mRNA join(15246527..15246815, FT complement(AL021938.1:148270..148405), FT complement(AL021938.1:112157..112298), FT complement(AL021938.1:70347..70516), FT complement(AL021938.1:53804..53980), FT complement(AL021938.1:34980..35215), FT complement(AL021938.1:25352..26390), FT complement(AL021938.1:21113..21615), FT complement(AL021938.1:17930..18022), FT complement(AL021938.1:15268..15386), FT complement(AL021938.1:15106..15176), FT complement(AL021938.1:14068..14182), FT complement(AL021938.1:11121..11226), FT complement(AL021938.1:10132..10314), FT complement(AL021938.1:9477..9607), FT complement(AL021938.1:9100..9283), FT complement(AL021938.1:5254..5361), FT complement(AL021938.1:501..2453)) FT /gene="JARID2" FT /locus_tag="RP1-232K4.1-001" FT /product="jumonji, AT rich interactive domain 2" FT /note="match: ESTs: Em:AI147595 Em:AI266096 Em:AI702951 FT Em:BB287153 Em:BB698816" FT /note="match: cDNAs: Em:BC003374.1 Em:U57592.1" FT misc_feature 15246704..15246714 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT CDS join(15246771..15246815, FT complement(AL021938.1:148270..148405), FT complement(AL021938.1:112157..112298), FT complement(AL021938.1:70347..70516), FT complement(AL021938.1:53804..53980), FT complement(AL021938.1:34980..35215), FT complement(AL021938.1:25352..26390), FT complement(AL021938.1:21113..21615), FT complement(AL021938.1:17930..18022), FT complement(AL021938.1:15268..15386), FT complement(AL021938.1:15106..15176), FT complement(AL021938.1:14068..14182), FT complement(AL021938.1:11121..11226), FT complement(AL021938.1:10132..10314), FT complement(AL021938.1:9477..9607), FT complement(AL021938.1:9100..9283), FT complement(AL021938.1:5254..5361), FT complement(AL021938.1:2271..2453)) FT /gene="JARID2" FT /locus_tag="RP1-232K4.1-001" FT /standard_name="OTTHUMP00000016058" FT /product="jumonji, AT rich interactive domain 2" FT /note="match: proteins: Sw:Q62315 Sw:Q92833" FT /protein_id="CAI15719.1" FT /translation="MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNSQK FT RQHAEGIAGSLKTVNGLLGNDQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGP FT SRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCL FT RGSPALPNSMVYFGSSQDEEEVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNG FT HVFNGSSRSTREKEPVQKHKSKEATPAKEKHSDHRADSRREQASANHPAAAPSTGSSAK FT GLAATHHHPPLHRSAQDLRKQVSKVNGVTRMSSLGAGVTSAKKMREVRPSPSKTVKYTA FT TVTKGAVTYTKAKRELVKDTKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKS FT TGPAVNGLKVSGRLNPKSCTKEVGGRQLREGLQLREGLRNSKRRLEEAHQAEKPQSPPK FT KMKGAAGPAEGPGKKAPAERGLLNGHVKKEVPERSLERNRPKRATAGKSTPGRQAHGKA FT DSASCENRSTSQPESVHKPQDSGKAEKGGGKAGWAAMDEIPVLRPSAKEFHDPLIYIES FT VRAQVEKFGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHL FT KSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPRTAQDRL FT AKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTENDHHKFHPLPR FT FEPKNGLIHGVAPRNGFRSKLKEVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHK FT CIYKGRSVSLTTFYRTARNIMSMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTN FT THGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSR FT DQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEV FT LCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMK FT RRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSS FT ARYGSHDGSSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCLECAL FT RHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKNGSIENCLSKPTPKRGPRKRAT FT VDVPPSRLSASSSSKSASSSS" FT mRNA complement(join(15248046..15248375,15248741..15248865)) FT /locus_tag="RP11-560J1.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW340306 Em:AW665239" FT misc_feature 15322592 FT /note="Clone_left_end: RP1-232K4" FT misc_feature complement(15326592..15522752) FT /note="annotated region of clone" FT polyA_site 15522243 FT polyA_signal 15522233..15522237 FT mRNA join(15501589..15501640,15504731..15504823, FT 15505396..15505526,15507367..15507485,15507577..15507647, FT 15508571..15508624) FT /gene="JARID2" FT /locus_tag="RP1-232K4.1-002" FT /product="jumonji, AT rich interactive domain 2" FT /note="match: ESTs: Em:BE242572 Em:BM144942" FT mRNA join(AL136162.18:49071..49359,15374348..15374483, FT 15410455..15410596,15452237..15452406,15468773..15468949, FT 15487538..15487773,15496363..15497401,15501138..15501640, FT 15504731..15504823,15507367..15507485,15507577..15507647, FT 15508571..15508685,15511527..15511632,15512439..15512621, FT 15513146..15513276,15513470..15513653,15517392..15517499, FT 15520300..15522252) FT /gene="JARID2" FT /locus_tag="RP1-232K4.1-001" FT /product="jumonji, AT rich interactive domain 2" FT /note="match: cDNAs: Em:BC003374.1 Em:U57592.1" FT /note="match: ESTs: Em:AI147595 Em:AI266096 Em:AI702951 FT Em:BB287153 Em:BB698816" FT CDS join(AL136162.18:49315..49359,15374348..15374483, FT 15410455..15410596,15452237..15452406,15468773..15468949, FT 15487538..15487773,15496363..15497401,15501138..15501640, FT 15504731..15504823,15507367..15507485,15507577..15507647, FT 15508571..15508685,15511527..15511632,15512439..15512621, FT 15513146..15513276,15513470..15513653,15517392..15517499, FT 15520300..15520482) FT /gene="JARID2" FT /locus_tag="RP1-232K4.1-001" FT /standard_name="OTTHUMP00000016058" FT /product="jumonji, AT rich interactive domain 2" FT /note="match: proteins: Sw:Q62315 Sw:Q92833" FT /protein_id="CAI19873.1" FT /translation="MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNSQK FT RQHAEGIAGSLKTVNGLLGNDQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGP FT SRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCL FT RGSPALPNSMVYFGSSQDEEEVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNG FT HVFNGSSRSTREKEPVQKHKSKEATPAKEKHSDHRADSRREQASANHPAAAPSTGSSAK FT GLAATHHHPPLHRSAQDLRKQVSKVNGVTRMSSLGAGVTSAKKMREVRPSPSKTVKYTA FT TVTKGAVTYTKAKRELVKDTKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKS FT TGPAVNGLKVSGRLNPKSCTKEVGGRQLREGLQLREGLRNSKRRLEEAHQAEKPQSPPK FT KMKGAAGPAEGPGKKAPAERGLLNGHVKKEVPERSLERNRPKRATAGKSTPGRQAHGKA FT DSASCENRSTSQPESVHKPQDSGKAEKGGGKAGWAAMDEIPVLRPSAKEFHDPLIYIES FT VRAQVEKFGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHL FT KSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPRTAQDRL FT AKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTENDHHKFHPLPR FT FEPKNGLIHGVAPRNGFRSKLKEVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHK FT CIYKGRSVSLTTFYRTARNIMSMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTN FT THGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSR FT DQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEV FT LCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMK FT RRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSS FT ARYGSHDGSSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCLECAL FT RHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKNGSIENCLSKPTPKRGPRKRAT FT VDVPPSRLSASSSSKSASSSS" FT misc_feature complement(15522753..15595739) FT /note="annotated region of clone" FT mRNA complement(join(15523038..15523450,15524757..15524900, FT 15533471..15533626,15585950..15586204)) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-003" FT /product="dystrobrevin binding protein 1" FT /note="match: ESTs: Em:AI425807 Em:AV724633 Em:AW327545" FT CDS join(AL022343.6:24683..24738,AL022343.6:35412..35465, FT AL022343.6:36189..36239,AL022343.6:49748..49808, FT AL022343.6:60077..60209,AL022343.6:72153..72285, FT complement(15593290..15593312), FT complement(15533471..15533626), FT complement(15524656..15524900)) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-002" FT /standard_name="OTTHUMP00000016063" FT /product="dystrobrevin binding protein 1" FT /note="match: proteins: Sw:Q96EV8" FT /protein_id="CAI42339.1" FT /translation="MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKY FT SAGLELLSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQL FT PALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKR FT KELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERR FT EPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPALGRVDKLALAEP FT GQYRCHSPPKVRRENHLPVTYA" FT mRNA join(AL022343.6:24683..24738,AL022343.6:35412..35465, FT AL022343.6:36189..36239,AL022343.6:49748..49808, FT AL022343.6:60077..60209,AL022343.6:72153..72285, FT complement(15593290..15593312), FT complement(15533471..15533626), FT complement(15523790..15524900)) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-002" FT /product="dystrobrevin binding protein 1" FT /note="match: cDNAs: Em:AL136637.1" FT CDS join(AL022343.6:24683..24738,AL022343.6:35412..35465, FT AL022343.6:36189..36239,AL022343.6:49748..49808, FT AL022343.6:60077..60209,AL022343.6:72153..72285, FT complement(15593290..15593312), FT complement(15533471..15533626), FT complement(15524757..15524900), FT complement(15523206..15523450)) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-001" FT /standard_name="OTTHUMP00000016062" FT /product="dystrobrevin binding protein 1" FT /note="match: proteins: Sw:Q96EV8 Sw:Q96EV8 Sw:Q96EV8 FT Sw:Q96EV8" FT /protein_id="CAI42340.1" FT /translation="MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKY FT SAGLELLSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQL FT PALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKR FT KELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERR FT EPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPALGPESSTCQNEI FT TLQVPNPSELRAKPPSSSSTCTDSATRDISEGGESPVVQSDEEEVQVDTALATSHTDRE FT ATPDGGEDSDS" FT mRNA join(AL022343.6:24683..24738,AL022343.6:35412..35465, FT AL022343.6:36189..36239,AL022343.6:49748..49808, FT AL022343.6:60077..60209,AL022343.6:72153..72285, FT complement(15593290..15593312), FT complement(15533471..15533626), FT complement(15524757..15524900), FT complement(15523038..15523450)) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-001" FT /product="dystrobrevin binding protein 1" FT /note="match: ESTs: Em:AL559190 Em:AW327545 Em:AW505075 FT Em:BF345101" FT /note="match: cDNAs: Em:AL136637.1 Em:BC011912.1" FT polyA_signal complement(15523054..15523059) FT polyA_site complement(15523038) FT misc_feature complement(15595740..15687782) FT /note="annotated region of clone" FT misc_feature complement(15669904..15669977) FT /note="Single clone region. Region covered only by PCR FT product of PAC DNA" FT misc_feature complement(15669934..15669958) FT /note="Single clone region. Low quality sequence of PCR FT product. Inverted Alu repeats flank this region" FT CDS join(complement(15663045..15663100), FT complement(15652318..15652371), FT complement(15651544..15651594), FT complement(15637975..15638035), FT complement(15627574..15627706), FT complement(15615498..15615630),AL021978.1:2428..2450, FT AL021978.1:62114..62269,AL021978.1:70840..71084) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-002" FT /standard_name="OTTHUMP00000016063" FT /product="dystrobrevin binding protein 1" FT /note="match: proteins: Sw:Q96EV8" FT /protein_id="CAI21976.1" FT /translation="MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKY FT SAGLELLSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQL FT PALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKR FT KELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERR FT EPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPALGRVDKLALAEP FT GQYRCHSPPKVRRENHLPVTYA" FT mRNA join(complement(15663045..15663100), FT complement(15652318..15652371), FT complement(15651544..15651594), FT complement(15637975..15638035), FT complement(15627574..15627706), FT complement(15615498..15615630),AL021978.1:2428..2450, FT AL021978.1:62114..62269,AL021978.1:70840..71950) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-002" FT /product="dystrobrevin binding protein 1" FT /note="match: cDNAs: Em:AL136637.1" FT CDS join(complement(15663045..15663100), FT complement(15652318..15652371), FT complement(15651544..15651594), FT complement(15637975..15638035), FT complement(15627574..15627706), FT complement(15615498..15615630),AL021978.1:2428..2450, FT AL021978.1:62114..62269,AL021978.1:70840..70983, FT AL021978.1:72290..72534) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-001" FT /standard_name="OTTHUMP00000016062" FT /product="dystrobrevin binding protein 1" FT /note="match: proteins: Sw:Q96EV8 Sw:Q96EV8 Sw:Q96EV8 FT Sw:Q96EV8" FT /protein_id="CAI21977.1" FT /translation="MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKY FT SAGLELLSRYEDTWAALHRRAKDCASAGELVDSEVVMLSAHWEKKKTSLVELQEQLQQL FT PALIADLESMTANLTHLEASFEEVENNLLHLEDLCGQCELERCKHMQSQQLENYKKNKR FT KELETFKAELDAEHAQKVLEMEHTQQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERR FT EPIGSMSSMEVNVDMLEQMDLMDISDQEALDVFLNSGGEENTVLSPALGPESSTCQNEI FT TLQVPNPSELRAKPPSSSSTCTDSATRDISEGGESPVVQSDEEEVQVDTALATSHTDRE FT ATPDGGEDSDS" FT mRNA join(complement(15663045..15663100), FT complement(15652318..15652371), FT complement(15651544..15651594), FT complement(15637975..15638035), FT complement(15627574..15627706), FT complement(15615498..15615630),AL021978.1:2428..2450, FT AL021978.1:62114..62269,AL021978.1:70840..70983, FT AL021978.1:72290..72702) FT /gene="DTNBP1" FT /locus_tag="RP1-147M19.1-001" FT /product="dystrobrevin binding protein 1" FT /note="match: ESTs: Em:AL559190 Em:AW327545 Em:AW505075 FT Em:BF345101" FT /note="match: cDNAs: Em:AL136637.1 Em:BC011912.1" FT misc_feature complement(15595740) FT /note="Clone_left_end: RP4-608E8" FT misc_feature 15761837 FT /note="Clone_left_end: RP3-436K10" FT misc_feature 15927076..16057701 FT /note="annotated region of clone" FT CDS 15935013..15935546 FT /pseudo FT /locus_tag="RP11-401E14.1-001" FT /product="ARPC3 actin related protein 2/3 complex, subunit FT 3 (21 kD) pseudogene" FT /note="match: proteins: Sw:O15145 Sw:Q9JM76" FT mRNA join(15995175..15995382,15999392..16000028) FT /locus_tag="RP11-401E14.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI520311" FT misc_feature 16057502 FT /note="Clone_left_end: RP1-13D10" FT misc_feature complement(16057702..16210748) FT /note="annotated region of clone" FT CDS 16171837..16172262 FT /pseudo FT /locus_tag="RP1-13D10.4-001" FT /product="mitochondrial 28S ribosomal protein S32 (MRP-S32) FT pseudogene" FT /note="match: proteins: Sw:Q9CPV3 Sw:Q9Y6G3" FT CDS complement(16163608..16163993) FT /pseudo FT /locus_tag="RP1-13D10.3-001" FT /product="pseudogene similar to part of eukaryotic FT translation initiation factor 2 subunit 2 EIF2S2" FT /note="match: proteins: Sw:P20042 Sw:P20042 Sw:P41035 FT Tr:Q96I16" FT CDS 16161157..16161642 FT /pseudo FT /locus_tag="RP1-13D10.2-001" FT /product="PERP, TP53 apoptosis effector (PERP) pseudogene" FT /note="match: proteins: Sw:Q96FX8 Sw:Q96FX8 Sw:Q96FX8 FT Sw:Q9JK95" FT polyA_site 16148479 FT polyA_signal 16148460..16148465 FT polyA_site 16147112 FT polyA_signal 16147039..16147044 FT CDS join(16143330..16143448,16143930..16144094, FT 16145128..16145548,16146893..16146982) FT /gene="MYLIP" FT /locus_tag="RP1-13D10.1-002" FT /standard_name="OTTHUMP00000018027" FT /product="myosin regulatory light chain interacting FT protein" FT /note="match: proteins: Sw:Q8WY64" FT /protein_id="CAI19547.2" FT /translation="MENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPV FT VQMATQSGKNVYLTVTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTVTSAVM FT MQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQ FT SPSHSPLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCG FT HTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTHTSLLNLTVI" FT mRNA join(16129356..16129640,16130788..16130978, FT 16141856..16142041,16143251..16143448,16143930..16144094, FT 16145128..16145548,16146893..16147112) FT /gene="MYLIP" FT /locus_tag="RP1-13D10.1-001" FT /product="myosin regulatory light chain interacting FT protein" FT /note="match: ESTs: Em:AA528788 Em:AW289405 Em:AW969403 FT Em:BE390993 Em:BE408919" FT /note="match: cDNAs: Em:AF187016.2" FT CDS join(16129554..16129640,16130788..16130978, FT 16141856..16142041,16143251..16143448,16143930..16144094, FT 16145128..16145548,16146893..16146982) FT /gene="MYLIP" FT /locus_tag="RP1-13D10.1-001" FT /standard_name="OTTHUMP00000018026" FT /product="myosin regulatory light chain interacting FT protein" FT /note="match: proteins: Sw:Q8WY64 Sw:Q8WY64 Sw:Q8WY64 FT Sw:Q8WY64" FT /protein_id="CAI19548.1" FT /translation="MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQ FT FTGSKGESLWLNLRNRISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEAL FT LAGHLLCSPEQAVELSALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKEL FT EGTSQASAEYQVLQIVSAMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRI FT AYPVVQMATQSGKNVYLTVTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTVT FT SAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVS FT RNNQSPSHSPLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTF FT CPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTHTSLLNLTVI" FT mRNA join(16129402..16129640,16141856..16142041, FT 16143251..16143448,16143930..16144094,16145128..16145548, FT 16146893..16148479) FT /gene="MYLIP" FT /locus_tag="RP1-13D10.1-002" FT /product="myosin regulatory light chain interacting FT protein" FT /note="match: cDNAs: Em:AF258586.1" FT CDS 16107853..16108824 FT /pseudo FT /locus_tag="RP1-13D10.5-001" FT /product="malate dehydrogenase pseudogene" FT /note="match: proteins: Sw:O88989 Sw:P14152 Sw:P40925" FT misc_feature 16210749..16256622 FT /note="annotated region of clone" FT mRNA join(16238807..16239011,16247073..16247192, FT 16250515..16250598,16254793..16254966, FT complement(AL009031.1:125379..125460), FT complement(AL009031.1:120985..121091), FT complement(AL009031.1:114040..114082), FT complement(AL009031.1:109254..109413), FT complement(AL009031.1:104689..104869)) FT /gene="GMPR" FT /locus_tag="RP3-467D16.2-001" FT /product="guanosine monophosphate reductase" FT /note="match: ESTs: Em:BE861039 Em:BE861043" FT CDS join(16238925..16239011,16247073..16247192, FT 16250515..16250598,16254793..16254966, FT complement(AL009031.1:125379..125460), FT complement(AL009031.1:120985..121091), FT complement(AL009031.1:114040..114082), FT complement(AL009031.1:109254..109413), FT complement(AL009031.1:104689..104869)) FT /gene="GMPR" FT /locus_tag="RP3-467D16.2-001" FT /standard_name="OTTHUMP00000016064" FT /product="guanosine monophosphate reductase" FT /note="match: proteins: Sw:P36959 Sw:P36959" FT /protein_id="CAI19917.1" FT /translation="MPRIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTY FT SGIPIIVANMDTVGTFEMAAVMSQHSMFTAIHKHYSLDDWKLFATNHPECLQNVAVSSG FT SGQNDLEKMTSILEAVPQVKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGNVVTGE FT MVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGC FT TCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVFERNGRKLKLFYGMSSDTAMNKHAGG FT VAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQH FT NTVFS" FT misc_feature 16256423 FT /note="Clone_left_end: RP3-467D16" FT misc_feature complement(16256623..16400105) FT /note="annotated region of clone" FT mRNA join(AL138883.12:28159..28363,AL138883.12:36425..36544, FT AL138883.12:39867..39950,AL138883.12:44145..44318, FT 16274646..16274727,16279015..16279121,16286024..16286066, FT 16290693..16290852,16295237..16295417) FT /gene="GMPR" FT /locus_tag="RP3-467D16.2-001" FT /product="guanosine monophosphate reductase" FT /note="match: ESTs: Em:BE861039 Em:BE861043" FT CDS join(AL138883.12:28277..28363,AL138883.12:36425..36544, FT AL138883.12:39867..39950,AL138883.12:44145..44318, FT 16274646..16274727,16279015..16279121,16286024..16286066, FT 16290693..16290852,16295237..16295417) FT /gene="GMPR" FT /locus_tag="RP3-467D16.2-001" FT /standard_name="OTTHUMP00000016064" FT /product="guanosine monophosphate reductase" FT /note="match: proteins: Sw:P36959 Sw:P36959" FT /protein_id="CAI21422.1" FT /translation="MPRIDADLKLDFKDVLLRPKRSSLKSRAEVDLERTFTFRNSKQTY FT SGIPIIVANMDTVGTFEMAAVMSQHSMFTAIHKHYSLDDWKLFATNHPECLQNVAVSSG FT SGQNDLEKMTSILEAVPQVKFICLDVANGYSEHFVEFVKLVRAKFPEHTIMAGNVVTGE FT MVEELILSGADIIKVGVGPGSVCTTRTKTGVGYPQLSAVIECADSAHGLKGHIISDGGC FT TCPGDVAKAFGAGADFVMLGGMFSGHTECAGEVFERNGRKLKLFYGMSSDTAMNKHAGG FT VAEYRASEGKTVEVPYKGDVENTILDILGGLRSTCTYVGAAKLKELSRRATFIRVTQQH FT NTVFS" FT CDS complement(join(16306560..16307090,16326625..16328541)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-001" FT /standard_name="OTTHUMP00000016065" FT /product="ataxin 1" FT /note="match: proteins: Sw:P54253.1 Sw:P54254.1 Sw:Q63540.1 FT Tr:Q17S02.1 Tr:Q8C866.1" FT /protein_id="CAA15622.1" FT /translation="MKSNQERSNECLPPKKREIPATSRSSEEKAPTLPSDNHRVEGTAW FT LPGNPGGRGHGGGRHGPAGTSVELGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLPA FT AYATPQPGTPVSPVQYAHLPHTFQFIGSSQYSGTYASFIPSQLIPPTANPVTSAVASAA FT GATTPSQRSQLEAYSTLLANMGSLSQTPGHKAEQQQQQQQQQQQQHQHQQQQQQQQQQQ FT QQQHLSRAPGLITPGSPPPAQQNQYVHISSSPQNTGRTASPPAIPVHLHPHQTMIPHTL FT TLGPPSQVVMQYADSGSHFVPREATKKAESSRLQQAIQAKEVLNGEMEKSRRYGAPSSA FT DLGLGKAGGKSVPHPYESRHVVVHPSPSDYSSRDPSGVRASVMVLPNSNTPAADLEVQQ FT ATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPVGLPATAFYAGTQ FT PPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGSTDMEASGAAPAIVTSSPQFAA FT VPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPAAAPPTLPPYFMK FT GSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGE FT HRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLKNLKNGS FT VKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGINQGSAQMLSENGELKFPEKMGLP FT AAPFLTKIEPSKPAATRKRRWSAPESRKLEKSEDEPPLTLPKPSLIPQEVKICIEGRSN FT VGK" FT mRNA join(complement(AL137003.12:86476..86634), FT complement(AL137003.12:79221..79269), FT complement(AL137003.12:78411..78525), FT AL031120.1:17022..17147,AL031120.1:89016..89143, FT AL031120.1:152235..152296, FT complement(AL034375.23:86198..86336), FT complement(16326625..16328701), FT complement(16299343..16307090)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-001" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC117125.1 Em:X79204.1 Em:X91619.1" FT /note="match: ESTs: Em:AI954416.1 Em:BE087001.1 FT Em:BF222712.1 Em:CX780949.1" FT polyA_signal complement(16299361..16299366) FT polyA_site complement(16299343) FT misc_feature 16400106..16509890 FT /note="annotated region of clone" FT polyA_site complement(16432795) FT polyA_signal complement(16432810..16432815) FT mRNA join(complement(AL137003.12:75154..75270), FT AL031120.1:17022..17147,AL031120.1:89016..89143, FT AL031120.1:152235..152296,complement(16486203..16486341), FT complement(16433177..16433327), FT complement(16432795..16432964)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-002" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC010948.1 Em:BC029401.1" FT /note="match: ESTs: Em:AI023140.1 Em:BM825767.1" FT mRNA join(complement(AL137003.12:86476..86638), FT complement(AL137003.12:78411..78525), FT AL031120.1:17022..17147,AL031120.1:89016..89143, FT AL031120.1:152235..152296,complement(16485366..16486341)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-008" FT /product="ataxin 1" FT /note="match: cDNAs: Em:AK311274.1" FT mRNA join(complement(AL137003.12:86476..86634), FT complement(AL137003.12:79221..79269), FT complement(AL137003.12:78411..78525), FT AL031120.1:17022..17147,AL031120.1:89016..89143, FT AL031120.1:152235..152296,complement(16486203..16486341), FT AL009031.1:71405..73481,AL009031.1:93016..100763) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-001" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC117125.1 Em:X79204.1 Em:X91619.1" FT /note="match: ESTs: Em:AI954416.1 Em:BE087001.1 FT Em:BF222712.1 Em:CX780949.1" FT misc_feature 16509691 FT /note="Clone_left_end: RP3-459L4" FT misc_feature complement(16509891..16675153) FT /note="annotated region of clone" FT polyA_signal complement(16615227..16615232) FT polyA_site complement(16615206) FT mRNA complement(join(AL034375.23:32790..32959, FT AL034375.23:33172..33322,AL034375.23:86198..86336, FT 16522858..16522919,16586011..16586138,16658007..16658132, FT AL137003.12:75154..75270)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-002" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC010948.1 Em:BC029401.1" FT /note="match: ESTs: Em:AI023140.1 Em:BM825767.1" FT mRNA complement(join(16615206..16615856,16658007..16658132, FT AL137003.12:78411..78486)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-007" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC092446.1" FT mRNA complement(join(16667199..16667783, FT AL137003.12:86476..86634)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-009" FT /product="ataxin 1" FT /note="match: ESTs: Em:CD639065.1" FT mRNA complement(join(AL034375.23:85361..86336, FT 16522858..16522919,16586011..16586138,16658007..16658132, FT AL137003.12:78411..78525,AL137003.12:86476..86638)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-008" FT /product="ataxin 1" FT /note="match: cDNAs: Em:AK311274.1" FT mRNA join(complement(AL137003.12:86476..86634), FT complement(AL137003.12:79221..79269), FT complement(AL137003.12:78411..78525), FT complement(16658007..16658132), FT complement(16586011..16586138), FT complement(16522858..16522919), FT complement(AL034375.23:86198..86336), FT AL009031.1:71405..73481,AL009031.1:93016..100763) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-001" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC117125.1 Em:X79204.1 Em:X91619.1" FT /note="match: ESTs: Em:AI954416.1 Em:BE087001.1 FT Em:BF222712.1 Em:CX780949.1" FT misc_feature 16675154..16788855 FT /note="annotated region of clone" FT misc_feature 16733495 FT /note="Clone_left_end: CTC-1333E1" FT polyA_site complement(16737082) FT polyA_signal complement(16737106..16737111) FT mRNA join(complement(16750207..16750323), FT AL031120.1:17022..17147,AL031120.1:89016..89143, FT AL031120.1:152235..152296, FT complement(AL034375.23:86198..86336), FT complement(AL034375.23:33172..33322), FT complement(AL034375.23:32790..32959)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-002" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC010948.1 Em:BC029401.1" FT /note="match: ESTs: Em:AI023140.1 Em:BM825767.1" FT mRNA join(complement(16753464..16753539), FT AL031120.1:17022..17147,AL031120.1:59298..59948) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-007" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC092446.1" FT misc_feature 16760270..16760611 FT /note="Single clone region. Assembly consistent with FT restriction digest" FT mRNA join(16761369..16761397,16762350..16762510, FT 16762583..16762883) FT /locus_tag="RP1-151F17.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:DB477374.1" FT mRNA join(complement(16761529..16761687),AL031120.1:7371..7955) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-009" FT /product="ataxin 1" FT /note="match: ESTs: Em:CD639065.1" FT mRNA complement(join(16739833..16740149,16753464..16753578, FT 16754274..16754322,16761529..16761694)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-003" FT /product="ataxin 1" FT /note="match: ESTs: Em:DA072514.1 Em:DA415596.1" FT mRNA complement(join(16737082..16740149,16753464..16753578, FT 16761529..16761707)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-004" FT /product="ataxin 1" FT /note="match: cDNAs: Em:AK311649.1 Em:BC014548.1 FT Em:BC047894.1 Em:BC063120.1" FT /note="match: ESTs: Em:BF697040.1 Em:BG253572.1 FT Em:BG497560.1 Em:DA014569.1 Em:DA884819.1 Em:DB103131.1 FT Em:DB202047.1" FT mRNA complement(join(16738696..16740149,16761529..16761722)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-005" FT /product="ataxin 1" FT /note="match: cDNAs: Em:AK311649.1 Em:BC011026.1" FT /note="match: ESTs: Em:AI052586.1 Em:BF697040.1 FT Em:DA682352.1 Em:DB108026.1 Em:DB124412.1" FT mRNA complement(join(16753193..16753578,16761529..16761710)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-006" FT /product="ataxin 1" FT /note="match: ESTs: Em:DA885334.1" FT mRNA join(complement(16761529..16761691), FT complement(16753464..16753578),AL031120.1:17022..17147, FT AL031120.1:89016..89143,AL031120.1:152235..152296, FT complement(AL034375.23:85361..86336)) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-008" FT /product="ataxin 1" FT /note="match: cDNAs: Em:AK311274.1" FT mRNA join(complement(16761529..16761687), FT complement(16754274..16754322), FT complement(16753464..16753578),AL031120.1:17022..17147, FT AL031120.1:89016..89143,AL031120.1:152235..152296, FT complement(AL034375.23:86198..86336), FT AL009031.1:71405..73481,AL009031.1:93016..100763) FT /gene="ATXN1" FT /locus_tag="RP3-467D16.1-001" FT /product="ataxin 1" FT /note="match: cDNAs: Em:BC117125.1 Em:X79204.1 Em:X91619.1" FT /note="match: ESTs: Em:AI954416.1 Em:BE087001.1 FT Em:BF222712.1 Em:CX780949.1" FT mRNA join(16762143..16762510,16762583..16762849) FT /locus_tag="RP1-151F17.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:CN482556.1" FT misc_feature 16788755 FT /note="Clone_right_end: RP1-151F17" FT misc_feature 16875270 FT /note="Clone_right_end: CTC-1333E1" FT misc_feature 16910539 FT /note="Clone_left_end: RP1-294H2" FT misc_feature complement(16963647..16963649) FT /note="Region contains only unidirectional dGTP reads. FT Assembly consistent with restriction digest" FT misc_feature complement(16912539) FT /note="Clone_left_end: RP1-294H2" FT misc_feature 17084317..17164733 FT /note="annotated region of clone" FT mRNA join(17110726..17111111,17115193..17115370, FT 17120838..17120989) FT /locus_tag="RP3-486B10.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG484434" FT mRNA join(17128169..17129474,17130825..17131603) FT /locus_tag="RP3-486B10.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK026805" FT misc_feature 17149033..17149123 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 17164834 FT /note="Clone_right_end: RP3-486B10" FT misc_feature 17166903 FT /note="Clone_left_end: RP1-259A10" FT misc_feature 17167004..17317422 FT /note="annotated region of clone" FT CDS join(17281813..17281980,17283036..17283159, FT 17284888..17284942,17291987..17292350) FT /locus_tag="RP1-259A10.1-001" FT /standard_name="OTTHUMP00000016066" FT /product="ssDNA binding protein" FT /note="match: proteins: Sw:Q62176 Sw:Q9H0Z9 Sw:Q9H0Z9 FT Sw:Q9H0Z9 Sw:Q9H0Z9 Sw:Q9H0Z9 Tr:Q9BX46 Tr:Q9I8B3 FT Tr:Q9I8R5" FT /protein_id="CAC36889.1" FT /translation="MHTTQKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITD FT RQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQ FT QLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAA FT AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAF FT GQYQPQQLQTDRMQ" FT mRNA join(17281813..17281980,17283036..17283159, FT 17284888..17284942,17291987..17294106) FT /locus_tag="RP1-259A10.1-001" FT /product="ssDNA binding protein" FT /note="match: ESTs: Em:AV307961 Em:AV333298 Em:AV665173 FT Em:AW125876 Em:BF126081 Em:BF126183 Em:BF126201 Em:BF343186 FT Em:BF541943 Em:BF575943 Em:BF576962 Em:BF577034 Em:BF607899 FT Em:BF670267 Em:BF670600 Em:BF672574 Em:BF790760 Em:W52677" FT /note="match: cDNAs: Em:AF223427 Em:AJ271404 Em:X75314 FT Em:X75315 Em:X75316" FT mRNA join(17282932..17283159,17284888..17284942, FT 17291987..17294097) FT /locus_tag="RP1-259A10.1-002" FT /product="ssDNA binding protein" FT /note="match: cDNAs: Em:AK055391.1" FT CDS join(17283003..17283159,17284888..17284942, FT 17291987..17292350) FT /locus_tag="RP1-259A10.1-002" FT /standard_name="OTTHUMP00000016067" FT /product="ssDNA binding protein" FT /note="match: proteins: Tr:Q96NI3" FT /protein_id="CAI19958.1" FT /translation="MYVCLCVSVAKVTMADRAAAERACKDPNPIIDGRKANVNLAYLGA FT KPRIMQPGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPY FT IDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGT FT AAAAAAAAAAAAAFGQYQPQQLQTDRMQ" FT polyA_signal 17293573..17293578 FT polyA_site 17294106 FT misc_feature 17317321 FT /note="Clone_right_end: RP1-259A10" FT misc_feature 17365256 FT /note="Clone_left_end: RP1-273P12" FT misc_feature 17365456..17531589 FT /note="annotated region of clone" FT CDS complement(join(17531125..17531554,AL138824.19:101..>378)) FT /pseudo FT /locus_tag="RP1-273P12.3-001" FT /product="60S ribosomal protein L7 (RPL7) pseudogene" FT /note="match: proteins: Sw:O01802 Sw:O60143 Sw:P05426 FT Sw:P05737 Sw:P11874 Sw:P14148 Sw:P18124 Sw:P25457 Sw:P32100 FT Sw:P60039 Sw:P60040 Sw:P81294 Tr:O95036 Tr:O97250" FT CDS 17381598..17382351 FT /pseudo FT /locus_tag="RP1-273P12.1-001" FT /product="ESD (esterase D/formylglutathione hydrolase) FT pseudogene" FT /note="match: proteins: Sw:P10768 Sw:P33018 Sw:P44556 FT Sw:P51025 Sw:Q62523 Sw:Q8LAS8 Sw:Q9R0P3 Tr:O52299 Tr:P73137 FT Tr:Q51671" FT mRNA join(17393736..17393977,17421786..17421907, FT 17426821..17426921,17463227..17463304,17507400..17507543, FT 17507872..17507957,17514080..17514185, FT AL138824.19:8011..8200,AL138824.19:9715..9890, FT AL138824.19:11579..11702,AL138824.19:11803..11885, FT AL138824.19:20206..20346,AL138824.19:25101..26532) FT /gene="CAP2" FT /locus_tag="RP11-14H3.2-001" FT /product="CAP, adenylate cyclase-associated protein, 2 FT (yeast)" FT /note="match: ESTs: Em:AA031399 Em:AA040613 Em:AA045873 FT Em:AA058893 Em:AA196051 Em:AA459756 Em:AI041653 Em:AI189507 FT Em:AI239697 Em:AI816086.1 Em:AI928000 Em:AL553072 FT Em:AL599193 Em:AW580843 Em:BB864121.1 Em:BE295542.1 FT Em:BE883956 Em:BE888893.1 Em:BF306907.1 Em:BF575769 FT Em:BF672327 Em:BF680020.1 Em:BF693046 Em:BF748369 FT Em:BF991222 Em:BF999514 Em:BG122482 Em:BG181777 Em:BG219748 FT Em:BG700400.1 Em:BG701125.1 Em:BG703919.1 Em:BG704263.1 FT Em:BG753535.1 Em:BI032461 Em:BI452707 Em:BI553516.1 FT Em:BI597841.1 Em:BI604153.1 Em:BI760802 Em:BI850313 FT Em:BM012198 Em:BM477902.1 Em:BM921460.1 Em:F00716 Em:F30654 FT Em:F34572 Em:M78937 Em:R19127 Em:R22846 Em:T80976 Em:W19251 FT Em:W25362 Em:W60636" FT /note="match: cDNAs: Em:AB060844.1 Em:AF411959.1 FT Em:AK010235.1 Em:AK013331.1 Em:AK014979.1 Em:BC008481.1 FT Em:BC013963.1 Em:L12168.1 Em:U02390.1 Em:U31935.1" FT misc_feature 17394205..17394219 FT /note="Weak data" FT misc_feature 17406463 FT /note="Clone_right_end: RP11-802L12" FT CDS join(17421796..17421907,17426821..17426921, FT 17463227..17463304,17507400..17507543,17507872..17507957, FT 17514080..17514185,AL138824.19:8011..8200, FT AL138824.19:9715..9890,AL138824.19:11579..11702, FT AL138824.19:11803..11885,AL138824.19:20206..20346, FT AL138824.19:25101..25184) FT /gene="CAP2" FT /locus_tag="RP11-14H3.2-001" FT /standard_name="OTTHUMP00000016069" FT /product="CAP, adenylate cyclase-associated protein, 2 FT (yeast)" FT /note="match: proteins: Em:[0] Sw:P17555 Sw:P36621 FT Sw:P40122 Sw:P40123 Sw:P40124 Sw:P52481 Sw:P54654 Sw:Q01518 FT Sw:Q08163 Sw:Q62523 Tr:Q5A6P9 Tr:Q9VPX7" FT /protein_id="CAC26824.2" FT /translation="MQGLVERLERAVSRLESLSAESHRPPGNCGEVNGVIAGVAPSVEA FT FDKLMDSMVAEFLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVAALL FT KPISEKIQEIQTFRERNRGSNMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFY FT TNRVLKDYKHSDLRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTVSAFSVL FT SSGPGLPPPPPPLPPPGPPPLFENEGKKEESSPSRSALFAQLNQGEAITKGLRHVTDDQ FT KTYKNPSLRAQGGQTQSPTKSHTPSPTSPKSYPSQKHAPVLELEGKKWRVEYQEDRNDL FT VISETELKQVAYIFKCEKSTIQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQI FT QVMGRVPTISINKTEGCHIYLSEDALDCEIVSAKSSEMNILIPQDGDYREFPIPEQFKT FT AWDGSKLITEPAEIMA" FT misc_feature 17492669 FT /note="Clone_left_end: RP11-14H3" FT polyA_site complement(17531026) FT polyA_signal complement(17531082..17531087) FT misc_feature 17531489 FT /note="Clone_right_end: RP1-273P12" FT misc_feature 17531590..17627691 FT /note="annotated region of clone" FT CDS complement(join(AL034372.33:165770..166199, FT 17531590..>17531867)) FT /pseudo FT /locus_tag="RP1-273P12.3-001" FT /product="60S ribosomal protein L7 (RPL7) pseudogene" FT /note="match: proteins: Sw:O01802 Sw:O60143 Sw:P05426 FT Sw:P05737 Sw:P11874 Sw:P14148 Sw:P18124 Sw:P25457 Sw:P32100 FT Sw:P60039 Sw:P60040 Sw:P81294 Tr:O95036 Tr:O97250" FT mRNA complement(join(17615269..17616412,17616758..17616926, FT 17624792..17625064,17626039..17626395, FT AL157776.15:1295..2179,AL157776.15:5290..5484, FT AL157776.15:9793..10410,AL157776.15:12579..12704, FT AL157776.15:18707..18794,AL157776.15:20447..20545, FT AL157776.15:21803..21940,AL157776.15:34293..34419, FT AL157776.15:34658..34710,AL157776.15:37879..38025, FT AL157776.15:41615..41668,AL157776.15:41933..41977, FT AL157776.15:42070..42186,AL157776.15:47545..47673, FT AL157776.15:47869..48008,AL157776.15:48162..48410, FT AL157776.15:61036..61258,AL138724.12:8974..9084)) FT /gene="NUP153" FT /locus_tag="RP11-14H3.6-001" FT /product="nucleoporin 153kDa" FT /note="match: ESTs: Em:AA020948 Em:AA280626 Em:AA281956 FT Em:AA287143 Em:AA647494 Em:AA987890 Em:AI373182 Em:AI392741 FT Em:AI568716 Em:AI675749 Em:AI809345 Em:AI863498 Em:AI918052 FT Em:AL040791 Em:AL043770 Em:AL044844 Em:AL597150 Em:AU125074 FT Em:AU128712 Em:AU137373 Em:AU137888 Em:AU148810 Em:AW172435 FT Em:AW269393 Em:AW269401 Em:AW269570 Em:AW502128 Em:AW502296 FT Em:AW604841 Em:AW859945 Em:AW859990 Em:AW937856 Em:AW997580 FT Em:AW997597 Em:BB529859 Em:BE085871 Em:BE333864 Em:BE381487 FT Em:BE539035 Em:BE539837 Em:BE885083 Em:BE886640 Em:BE909229 FT Em:BE930529 Em:BF120400 Em:BF135241 Em:BF212928 Em:BF305010 FT Em:BF702538 Em:BF732659 Em:BF782907 Em:BF843418 Em:BF844739 FT Em:BF934823 Em:BF934824 Em:BF991876 Em:BF991889 Em:BF992423 FT Em:BG067610 Em:BG080749 Em:BG106248 Em:BG256869 Em:BG259567 FT Em:BG387515 Em:BG505279 Em:BG986900 Em:BI040158 Em:BI040160 FT Em:BI040168 Em:BI052625 Em:BM090763 Em:F13065 Em:H89627 FT Em:L44346 Em:R17048 Em:T09409 Em:T75378" FT /note="match: cDNAs: Em:AF045567.1 Em:AF434196.1 FT Em:L06821.1 Em:Z25535.1" FT CDS complement(join(17616328..17616412,17616758..17616926, FT 17624792..17625064,17626039..17626395, FT AL157776.15:1295..2179,AL157776.15:5290..5484, FT AL157776.15:9793..10410,AL157776.15:12579..12704, FT AL157776.15:18707..18794,AL157776.15:20447..20545, FT AL157776.15:21803..21940,AL157776.15:34293..34419, FT AL157776.15:34658..34710,AL157776.15:37879..38025, FT AL157776.15:41615..41668,AL157776.15:41933..41977, FT AL157776.15:42070..42186,AL157776.15:47545..47673, FT AL157776.15:47869..48008,AL157776.15:48162..48410, FT AL157776.15:61036..61258,AL138724.12:8974..9084)) FT /gene="NUP153" FT /locus_tag="RP11-14H3.6-001" FT /standard_name="OTTHUMP00000016070" FT /product="nucleoporin 153kDa" FT /note="match: proteins: Sw:P49790 Sw:P49791 Tr:O73749" FT /protein_id="CAI12246.1" FT /translation="MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTE FT SVKNIVPGWLQRYFNKNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPE FT PAVSNTEEPSTTSTASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGF FT SLVKEIKDSTSQHDDDNISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHT FT ATSSKKPAFNLSAFGTLSPSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNT FT PYQAPVRRQMKAKQLSAQSYGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPL FT DRSGIDITDFQAKREKVDSQYPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQR FT IDNKCSTGYEKNMTPGQNREQRESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVA FT SKPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSP FT SSTGSPMFKFSSPIVKSTEANVLPPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHH FT VTTVNSTNCKKTPPEDCEGPFRPAEILKEGSVLDILKSPGFASPKIDSVAAQPTATSPV FT VYTRPAISSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQ FT TGIETPNKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTC FT VKRALTLTVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNK FT CVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKC FT LACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQG FT GFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGL FT SNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSF FT NLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQ FT QEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQP FT AKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVAT FT FVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNT FT TTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGS FT ISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTT FT NFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFTVGSNGKNVFSSSGTS FT FSGRKIKTAVRRRK" FT polyA_signal 17557985..17557990 FT polyA_site 17558021 FT mRNA join(AL034372.33:28381..28622,AL034372.33:56431..56552, FT AL034372.33:61466..61566,AL034372.33:97872..97949, FT AL034372.33:142045..142188,AL034372.33:142517..142602, FT AL034372.33:148725..148830,17539500..17539689, FT 17541204..17541379,17543068..17543191,17543292..17543374, FT 17551695..17551835,17556590..17558021) FT /gene="CAP2" FT /locus_tag="RP11-14H3.2-001" FT /product="CAP, adenylate cyclase-associated protein, 2 FT (yeast)" FT /note="match: ESTs: Em:AA031399 Em:AA040613 Em:AA045873 FT Em:AA058893 Em:AA196051 Em:AA459756 Em:AI041653 Em:AI189507 FT Em:AI239697 Em:AI816086.1 Em:AI928000 Em:AL553072 FT Em:AL599193 Em:AW580843 Em:BB864121.1 Em:BE295542.1 FT Em:BE883956 Em:BE888893.1 Em:BF306907.1 Em:BF575769 FT Em:BF672327 Em:BF680020.1 Em:BF693046 Em:BF748369 FT Em:BF991222 Em:BF999514 Em:BG122482 Em:BG181777 Em:BG219748 FT Em:BG700400.1 Em:BG701125.1 Em:BG703919.1 Em:BG704263.1 FT Em:BG753535.1 Em:BI032461 Em:BI452707 Em:BI553516.1 FT Em:BI597841.1 Em:BI604153.1 Em:BI760802 Em:BI850313 FT Em:BM012198 Em:BM477902.1 Em:BM921460.1 Em:F00716 Em:F30654 FT Em:F34572 Em:M78937 Em:R19127 Em:R22846 Em:T80976 Em:W19251 FT Em:W25362 Em:W60636" FT /note="match: cDNAs: Em:AB060844.1 Em:AF411959.1 FT Em:AK010235.1 Em:AK013331.1 Em:AK014979.1 Em:BC008481.1 FT Em:BC013963.1 Em:L12168.1 Em:U02390.1 Em:U31935.1" FT CDS 17582265..17582536 FT /pseudo FT /locus_tag="RP11-14H3.3-001" FT /product="pseudogene similar to SMT3H2" FT /note="match: proteins: Sw:P61959" FT misc_feature 17587192 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 100bp by restriction digest data" FT CDS join(AL034372.33:56441..56552,AL034372.33:61466..61566, FT AL034372.33:97872..97949,AL034372.33:142045..142188, FT AL034372.33:142517..142602,AL034372.33:148725..148830, FT 17539500..17539689,17541204..17541379,17543068..17543191, FT 17543292..17543374,17551695..17551835,17556590..17556673) FT /gene="CAP2" FT /locus_tag="RP11-14H3.2-001" FT /standard_name="OTTHUMP00000016069" FT /product="CAP, adenylate cyclase-associated protein, 2 FT (yeast)" FT /note="match: proteins: Em:[0] Sw:P17555 Sw:P36621 FT Sw:P40122 Sw:P40123 Sw:P40124 Sw:P52481 Sw:P54654 Sw:Q01518 FT Sw:Q08163 Sw:Q62523 Tr:Q5A6P9 Tr:Q9VPX7" FT /protein_id="CAI12250.1" FT /translation="MQGLVERLERAVSRLESLSAESHRPPGNCGEVNGVIAGVAPSVEA FT FDKLMDSMVAEFLKNSRILAGDVETHAEMVHSAFQAQRAFLLMASQYQQPHENDVAALL FT KPISEKIQEIQTFRERNRGSNMFNHLSAVSESIPALGWIAVSPKPGPYVKEMNDAATFY FT TNRVLKDYKHSDLRHVDWVKSYLNIWSELQAYIKEHHTTGLTWSKTGPVASTVSAFSVL FT SSGPGLPPPPPPLPPPGPPPLFENEGKKEESSPSRSALFAQLNQGEAITKGLRHVTDDQ FT KTYKNPSLRAQGGQTQSPTKSHTPSPTSPKSYPSQKHAPVLELEGKKWRVEYQEDRNDL FT VISETELKQVAYIFKCEKSTIQIKGKVNSIIIDNCKKLGLVFDNVVGIVEVINSQDIQI FT QVMGRVPTISINKTEGCHIYLSEDALDCEIVSAKSSEMNILIPQDGDYREFPIPEQFKT FT AWDGSKLITEPAEIMA" FT mRNA join(17600586..17601352,17602821..17602941, FT 17605137..17605260,17606105..17606244,17608426..17611950) FT /gene="FAM8A1" FT /locus_tag="RP11-14H3.1-001" FT /product="family with sequence similarity 8, member A1" FT /note="match: ESTs: Em:AL044564 Em:AW372272 Em:AW372319 FT Em:AW372459 Em:AW601327 Em:AW601328 Em:AW961567 Em:BG666711 FT Em:BG669003 Em:BI100553 Em:BI989563 Em:BM255767" FT /note="match: cDNAs: Em:AF097027.1" FT CDS join(17600641..17601352,17602821..17602941, FT 17605137..17605260,17606105..17606244,17608426..17608570) FT /gene="FAM8A1" FT /locus_tag="RP11-14H3.1-001" FT /standard_name="OTTHUMP00000016068" FT /product="family with sequence similarity 8, member A1" FT /note="match: proteins: Sw:Q9UBU6" FT /protein_id="CAI12251.1" FT /translation="MAEGPEEARGHPPGQDDGGGDHEPVPSLRGPPTTAVPCPRDDPQA FT EPQAPGRPTAPGLAAAAAADKLEPPRELRKRGEAASGSGAELQEQAGCEAPEAAAPRER FT PARLSAREYSRQVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSPQSFPSGGAAVPQAAA FT PPPPQLGYYNPFYFLSPGAAGPDPRTAAGISTPAPVAGLGPRAPHVQASVRATPVTRVG FT SAAPSRSPSETGRQAGREYVIPSLAHRFMAEMVDFFILFFIKATIVLSIMHLSGIKDIS FT KFAMHYIIEEIDEDTSMEDLQKMMVVALIYRLLVCFYEIICIWGAGGATPGKFLLGLRV FT VTCDTSVLIAPSRVLVIPSSNVSITTSTIRALIKNFSIASFFPAFITLLFFQHNRTAYD FT IVAGTIVVKRNGVR" FT polyA_signal 17611927..17611932 FT polyA_site 17611950 FT polyA_site complement(17615269) FT polyA_signal complement(17615281..17615286) FT misc_feature 17627492 FT /note="Clone_left_end: RP11-68J15" FT misc_feature 17627692..17697634 FT /note="annotated region of clone" FT mRNA complement(join(AL138824.19:83780..84923, FT AL138824.19:85269..85437,AL138824.19:93303..93575, FT AL138824.19:94550..94906,17628886..17629770, FT 17632881..17633075,17637384..17638001,17640170..17640295, FT 17646298..17646385,17648038..17648136,17649394..17649531, FT 17661884..17662010,17662249..17662301,17665470..17665616, FT 17669206..17669259,17669524..17669568,17669661..17669777, FT 17675136..17675264,17675460..17675599,17675753..17676001, FT 17688627..17688849,AL138724.12:8974..9084)) FT /gene="NUP153" FT /locus_tag="RP11-14H3.6-001" FT /product="nucleoporin 153kDa" FT /note="match: ESTs: Em:AA020948 Em:AA280626 Em:AA281956 FT Em:AA287143 Em:AA647494 Em:AA987890 Em:AI373182 Em:AI392741 FT Em:AI568716 Em:AI675749 Em:AI809345 Em:AI863498 Em:AI918052 FT Em:AL040791 Em:AL043770 Em:AL044844 Em:AL597150 Em:AU125074 FT Em:AU128712 Em:AU137373 Em:AU137888 Em:AU148810 Em:AW172435 FT Em:AW269393 Em:AW269401 Em:AW269570 Em:AW502128 Em:AW502296 FT Em:AW604841 Em:AW859945 Em:AW859990 Em:AW937856 Em:AW997580 FT Em:AW997597 Em:BB529859 Em:BE085871 Em:BE333864 Em:BE381487 FT Em:BE539035 Em:BE539837 Em:BE885083 Em:BE886640 Em:BE909229 FT Em:BE930529 Em:BF120400 Em:BF135241 Em:BF212928 Em:BF305010 FT Em:BF702538 Em:BF732659 Em:BF782907 Em:BF843418 Em:BF844739 FT Em:BF934823 Em:BF934824 Em:BF991876 Em:BF991889 Em:BF992423 FT Em:BG067610 Em:BG080749 Em:BG106248 Em:BG256869 Em:BG259567 FT Em:BG387515 Em:BG505279 Em:BG986900 Em:BI040158 Em:BI040160 FT Em:BI040168 Em:BI052625 Em:BM090763 Em:F13065 Em:H89627 FT Em:L44346 Em:R17048 Em:T09409 Em:T75378" FT /note="match: cDNAs: Em:AF045567.1 Em:AF434196.1 FT Em:L06821.1 Em:Z25535.1" FT CDS complement(join(AL138824.19:84839..84923, FT AL138824.19:85269..85437,AL138824.19:93303..93575, FT AL138824.19:94550..94906,17628886..17629770, FT 17632881..17633075,17637384..17638001,17640170..17640295, FT 17646298..17646385,17648038..17648136,17649394..17649531, FT 17661884..17662010,17662249..17662301,17665470..17665616, FT 17669206..17669259,17669524..17669568,17669661..17669777, FT 17675136..17675264,17675460..17675599,17675753..17676001, FT 17688627..17688849,AL138724.12:8974..9084)) FT /gene="NUP153" FT /locus_tag="RP11-14H3.6-001" FT /standard_name="OTTHUMP00000016070" FT /product="nucleoporin 153kDa" FT /note="match: proteins: Sw:P49790 Sw:P49791 Tr:O73749" FT /protein_id="CAI16393.1" FT /translation="MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTE FT SVKNIVPGWLQRYFNKNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPE FT PAVSNTEEPSTTSTASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGF FT SLVKEIKDSTSQHDDDNISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHT FT ATSSKKPAFNLSAFGTLSPSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNT FT PYQAPVRRQMKAKQLSAQSYGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPL FT DRSGIDITDFQAKREKVDSQYPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQR FT IDNKCSTGYEKNMTPGQNREQRESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVA FT SKPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSP FT SSTGSPMFKFSSPIVKSTEANVLPPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHH FT VTTVNSTNCKKTPPEDCEGPFRPAEILKEGSVLDILKSPGFASPKIDSVAAQPTATSPV FT VYTRPAISSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQ FT TGIETPNKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTC FT VKRALTLTVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNK FT CVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKC FT LACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQG FT GFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGL FT SNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSF FT NLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQ FT QEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQP FT AKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVAT FT FVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNT FT TTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGS FT ISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTT FT NFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFTVGSNGKNVFSSSGTS FT FSGRKIKTAVRRRK" FT misc_feature 17678455 FT /note="Clone_right_end: RP11-14H3" FT misc_feature 17697435 FT /note="Clone_left_end: RP11-500C11" FT misc_feature 17697635..17848380 FT /note="annotated region of clone" FT mRNA complement(join(AL138824.19:83780..84923, FT AL138824.19:85269..85437,AL138824.19:93303..93575, FT AL138824.19:94550..94906,AL157776.15:1295..2179, FT AL157776.15:5290..5484,AL157776.15:9793..10410, FT AL157776.15:12579..12704,AL157776.15:18707..18794, FT AL157776.15:20447..20545,AL157776.15:21803..21940, FT AL157776.15:34293..34419,AL157776.15:34658..34710, FT AL157776.15:37879..38025,AL157776.15:41615..41668, FT AL157776.15:41933..41977,AL157776.15:42070..42186, FT AL157776.15:47545..47673,AL157776.15:47869..48008, FT AL157776.15:48162..48410,AL157776.15:61036..61258, FT 17706508..17706618)) FT /gene="NUP153" FT /locus_tag="RP11-14H3.6-001" FT /product="nucleoporin 153kDa" FT /note="match: ESTs: Em:AA020948 Em:AA280626 Em:AA281956 FT Em:AA287143 Em:AA647494 Em:AA987890 Em:AI373182 Em:AI392741 FT Em:AI568716 Em:AI675749 Em:AI809345 Em:AI863498 Em:AI918052 FT Em:AL040791 Em:AL043770 Em:AL044844 Em:AL597150 Em:AU125074 FT Em:AU128712 Em:AU137373 Em:AU137888 Em:AU148810 Em:AW172435 FT Em:AW269393 Em:AW269401 Em:AW269570 Em:AW502128 Em:AW502296 FT Em:AW604841 Em:AW859945 Em:AW859990 Em:AW937856 Em:AW997580 FT Em:AW997597 Em:BB529859 Em:BE085871 Em:BE333864 Em:BE381487 FT Em:BE539035 Em:BE539837 Em:BE885083 Em:BE886640 Em:BE909229 FT Em:BE930529 Em:BF120400 Em:BF135241 Em:BF212928 Em:BF305010 FT Em:BF702538 Em:BF732659 Em:BF782907 Em:BF843418 Em:BF844739 FT Em:BF934823 Em:BF934824 Em:BF991876 Em:BF991889 Em:BF992423 FT Em:BG067610 Em:BG080749 Em:BG106248 Em:BG256869 Em:BG259567 FT Em:BG387515 Em:BG505279 Em:BG986900 Em:BI040158 Em:BI040160 FT Em:BI040168 Em:BI052625 Em:BM090763 Em:F13065 Em:H89627 FT Em:L44346 Em:R17048 Em:T09409 Em:T75378" FT /note="match: cDNAs: Em:AF045567.1 Em:AF434196.1 FT Em:L06821.1 Em:Z25535.1" FT CDS complement(join(AL138824.19:84839..84923, FT AL138824.19:85269..85437,AL138824.19:93303..93575, FT AL138824.19:94550..94906,AL157776.15:1295..2179, FT AL157776.15:5290..5484,AL157776.15:9793..10410, FT AL157776.15:12579..12704,AL157776.15:18707..18794, FT AL157776.15:20447..20545,AL157776.15:21803..21940, FT AL157776.15:34293..34419,AL157776.15:34658..34710, FT AL157776.15:37879..38025,AL157776.15:41615..41668, FT AL157776.15:41933..41977,AL157776.15:42070..42186, FT AL157776.15:47545..47673,AL157776.15:47869..48008, FT AL157776.15:48162..48410,AL157776.15:61036..61258, FT 17706508..17706618)) FT /gene="NUP153" FT /locus_tag="RP11-14H3.6-001" FT /standard_name="OTTHUMP00000016070" FT /product="nucleoporin 153kDa" FT /note="match: proteins: Sw:P49790 Sw:P49791 Tr:O73749" FT /protein_id="CAI40945.1" FT /translation="MASGAGGVGGGGGGKIRTRRCHQGPIKPYQQGRQQHQGILSRVTE FT SVKNIVPGWLQRYFNKNEDVCSCSTDTSEVPRWPENKEDHLVYADEESSNITDGRITPE FT PAVSNTEEPSTTSTASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGF FT SLVKEIKDSTSQHDDDNISTTSGFSSRASDKDITVSKNTSLPPLWSPEAERSHSLSQHT FT ATSSKKPAFNLSAFGTLSPSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQSKLRNT FT PYQAPVRRQMKAKQLSAQSYGVTSSTARRILQSLEKMSSPLADAKRIPSIVSSPLNSPL FT DRSGIDITDFQAKREKVDSQYPPVQRLMTPKPVSIATNRSVYFKPSLTPSGEFRKTNQR FT IDNKCSTGYEKNMTPGQNREQRESGFSYPNFSLPAANGLSSGVGGGGGKMRRERTRFVA FT SKPLEEEEMEVPVLPKISLPITSSSLPTFNFSSPEITTSSPSPINSSQALTNKVQMTSP FT SSTGSPMFKFSSPIVKSTEANVLPPSSIGFTFSVPVAKTAELSGSSSTLEPIISSSAHH FT VTTVNSTNCKKTPPEDCEGPFRPAEILKEGSVLDILKSPGFASPKIDSVAAQPTATSPV FT VYTRPAISSFSSSGIGFGESLKAGSSWQCDTCLLQNKVTDNKCIACQAAKLSPRDTAKQ FT TGIETPNKSGKTTLSASGTGFGDKFKPVIGTWDCDTCLVQNKPEAIKCVACETPKPGTC FT VKRALTLTVVSESAETMTASSSSCTVTTGTLGFGDKFKRPIGSWECSVCCVSNNAEDNK FT CVSCMSEKPGSSVPASSSSTVPVSLPSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKC FT LACESAKPGTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQG FT GFKIGVSSDSGSINPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGL FT SNPVSLTPFQFGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSF FT NLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQ FT QEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQP FT AKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVAT FT FVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNT FT TTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGS FT ISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQPSQSAFGSGTTPNSSSAFQFGSSTT FT NFNFTNNSPSGVFTFGANSSTPAASAQPSGSGGFPFNQSPAAFTVGSNGKNVFSSSGTS FT FSGRKIKTAVRRRK" FT mRNA join(AL023807.6:28627..28752,AL023807.6:29017..29107, FT AL023807.6:117981..117993,AL023807.6:142724..142784, FT AL023807.6:160039..160131,AL023807.6:160544..160724, FT AL023807.6:164119..164206,AL023807.6:165704..165838, FT AL023807.6:166672..166784,complement(17837703..17837814), FT complement(17837109..17837321), FT complement(17834192..17834302), FT complement(17831332..17831466), FT complement(17828471..17828601), FT complement(17826269..17826355), FT complement(17825999..17826165), FT complement(17817251..17817464), FT complement(17808999..17809161), FT complement(17805706..17805846), FT complement(17804592..17804741), FT complement(17800183..17800344), FT complement(17799497..17799670), FT complement(17796900..17797051), FT complement(17794803..17794935), FT complement(17794480..17794626), FT complement(17790103..17790141), FT complement(17788007..17788106), FT complement(17785746..17785872), FT complement(17783877..17783932), FT complement(17781408..17781532), FT complement(17780961..17781137), FT complement(17779823..17779915), FT complement(17779174..17779330), FT complement(17777508..17777575), FT complement(17775246..17775293), FT complement(17773709..17773814), FT complement(17772139..17772290), FT complement(17771345..17771449), FT complement(17763926..17765177)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-001" FT /product="kinesin family member 13A" FT /note="match: ESTs: Em:AA443259 Em:AA645826 Em:AA927630 FT Em:AI216393 Em:AI239594 Em:AI269288 Em:AI277715 Em:AI299016 FT Em:AI524805 Em:AI554574 Em:AI607200 Em:AI741619 Em:AI914504 FT Em:AV654336 Em:AW043963 Em:AW195590 Em:AW296537 Em:AW298458 FT Em:AW298525 Em:AW892660 Em:BB616793 Em:BE091805 Em:BE290686 FT Em:BE675263 Em:BE983842 Em:BE987475 Em:BF467522 FT Em:BI557303" FT /note="match: cDNAs: Em:AB001429.1 Em:AB001430.1 FT Em:AB037923.1 Em:AB074017.1 Em:AF279865.1 Em:AJ291578.1 FT Em:AJ291579.1 Em:AK020905.1 Em:AY014403.1 Em:AY014404.1 FT Em:BC005977.1" FT mRNA join(AL023807.6:28627..28752,AL023807.6:29017..29107, FT AL023807.6:117981..117993,AL023807.6:142724..142784, FT AL023807.6:160039..160131,AL023807.6:160544..160724, FT AL023807.6:164119..164206,AL023807.6:165704..165838, FT AL023807.6:166672..166784,complement(17837703..17837814), FT complement(17837109..17837321), FT complement(17834192..17834302), FT complement(17831332..17831466), FT complement(17828471..17828601), FT complement(17826269..17826355), FT complement(17825999..17826165), FT complement(17817251..17817464), FT complement(17808999..17809161), FT complement(17805706..17805846), FT complement(17804592..17804741), FT complement(17800183..17800344), FT complement(17799497..17799670), FT complement(17796900..17797051), FT complement(17794803..17794935), FT complement(17794480..17794626), FT complement(17790103..17790141), FT complement(17788007..17788106), FT complement(17785746..17785872), FT complement(17783877..17783932), FT complement(17781408..17781532), FT complement(17780961..17781137), FT complement(17779823..17779915), FT complement(17779174..17779330), FT complement(17777508..17777575), FT complement(17775246..17775293), FT complement(17773709..17773814), FT complement(17772139..17772290), FT complement(17763926..17765177)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-002" FT /product="kinesin family member 13A" FT /note="match: cDNAs: Em:AB037923.1 Em:AJ291578.1 FT Em:AJ291579.1 Em:AY014404.1" FT CDS join(AL023807.6:28698..28752,AL023807.6:29017..29107, FT AL023807.6:117981..117993,AL023807.6:142724..142784, FT AL023807.6:160039..160131,AL023807.6:160544..160724, FT AL023807.6:164119..164206,AL023807.6:165704..165838, FT AL023807.6:166672..166784,complement(17837703..17837814), FT complement(17837109..17837321), FT complement(17834192..17834302), FT complement(17831332..17831466), FT complement(17828471..17828601), FT complement(17826269..17826355), FT complement(17825999..17826165), FT complement(17817251..17817464), FT complement(17808999..17809161), FT complement(17805706..17805846), FT complement(17804592..17804741), FT complement(17800183..17800344), FT complement(17799497..17799670), FT complement(17796900..17797051), FT complement(17794803..17794935), FT complement(17794480..17794626), FT complement(17790103..17790141), FT complement(17788007..17788106), FT complement(17785746..17785872), FT complement(17783877..17783932), FT complement(17781408..17781532), FT complement(17780961..17781137), FT complement(17779823..17779915), FT complement(17779174..17779330), FT complement(17777508..17777575), FT complement(17775246..17775293), FT complement(17773709..17773814), FT complement(17772139..17772290), FT complement(17771345..17771449), FT complement(17764341..17765177)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-001" FT /standard_name="OTTHUMP00000016071" FT /product="kinesin family member 13A" FT /note="match: proteins: Sw:O35787 Sw:O43896 Sw:O60333 FT Sw:O88658 Sw:P33173 Sw:Q12756 Sw:Q60575 Sw:Q9EQW7 Sw:Q9H1H9 FT Sw:Q9NQT8 Tr:O01349 Tr:Q8VI89 Tr:Q9H193 Tr:Q9H194 FT Tr:Q9NBL1" FT /protein_id="CAI40947.1" FT /translation="MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTK FT QGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQT FT GSGKSFSMMGHAEQLGLIPRLCCALFKRISLEQNESQTFKVEVSYMEIYNEKVRDLLDP FT KGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSH FT AVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTT FT LGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETL FT STLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEES FT EKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLEMSGIKVGDDKCYLVNLNADPAL FT NELLVYYLKDHTRVGADTSQDIQLFGIGIQPQHCEIDIASDGDVTLTPKENARSCVNGT FT LVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDLDAASEASSEP FT DYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQL FT SPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANF FT LAEEMSKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLI FT DMRDLYQEWKEKVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPI FT ISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEIIHRVKKLTC FT RVKIKEATGLPLNLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCK FT DYVVNVTEEFLEFISDGALAIEVWGHRCAGNGSSIWEVDSLHAKTRTLHDRWNEVTRRI FT EMWISILELNELGEYAAVELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMV FT EAILSVSIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRRE FT YLDEQIKKVSNKTEKTEDDVEREAQLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPP FT PGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDDEVS FT ATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSF FT TQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTSDGETYI FT EKYTRGVLQVENILSLERLRQAIKEALSTKARHIRRSLSTPNVHNVSSSRPDLSGFDED FT DKGWPENQLDMSDYSSSYQDVACYGTLPRDSPRRNKEGCTSETPHALTVSPFKAFSPQP FT PKFFKPLMPVKEEHKKRIALEARPLLSQESMPPPQAHNPGCIVPSGSNGSSMPVEHNSK FT REKKIDSEEEENELEAINRKLISSQPYVPVEFADFSVYNASLENREWFSSKVDLSNSRV FT LEKEVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLAIQTKDADSTEHSTPSL FT VHDFRPSSNKELTEVEKGLVKDKIIVVPLKENSALAKGSPSSQSIPEKNSKSLCRTGSC FT SELDACPSKISQPARGFCPREVTVEHTTNILEDHSFTEFMGVSEGKDFDGLTDSSAGEL FT SSRRSLPNKTGGKTVSDGLHHPSQLHSKLENDQVIIPEAAFWVLCCQ" FT CDS join(AL023807.6:28698..28752,AL023807.6:29017..29107, FT AL023807.6:117981..117993,AL023807.6:142724..142784, FT AL023807.6:160039..160131,AL023807.6:160544..160724, FT AL023807.6:164119..164206,AL023807.6:165704..165838, FT AL023807.6:166672..166784,complement(17837703..17837814), FT complement(17837109..17837321), FT complement(17834192..17834302), FT complement(17831332..17831466), FT complement(17828471..17828601), FT complement(17826269..17826355), FT complement(17825999..17826165), FT complement(17817251..17817464), FT complement(17808999..17809161), FT complement(17805706..17805846), FT complement(17804592..17804741), FT complement(17800183..17800344), FT complement(17799497..17799670), FT complement(17796900..17797051), FT complement(17794803..17794935), FT complement(17794480..17794626), FT complement(17790103..17790141), FT complement(17788007..17788106), FT complement(17785746..17785872), FT complement(17783877..17783932), FT complement(17781408..17781532), FT complement(17780961..17781137), FT complement(17779823..17779915), FT complement(17779174..17779330), FT complement(17777508..17777575), FT complement(17775246..17775293), FT complement(17773709..17773814), FT complement(17772139..17772290), FT complement(17764341..17765177)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-002" FT /standard_name="OTTHUMP00000016072" FT /product="kinesin family member 13A" FT /note="match: proteins: Sw:P33173 Sw:Q12756 Sw:Q60575 FT Sw:Q9NQT8 Tr:O01349 Tr:Q20888 Tr:Q9NBL1 Tr:Q9NGQ2" FT /protein_id="CAI40948.1" FT /translation="MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTK FT QGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQT FT GSGKSFSMMGHAEQLGLIPRLCCALFKRISLEQNESQTFKVEVSYMEIYNEKVRDLLDP FT KGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSH FT AVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTT FT LGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETL FT STLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEES FT EKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLEMSGIKVGDDKCYLVNLNADPAL FT NELLVYYLKDHTRVGADTSQDIQLFGIGIQPQHCEIDIASDGDVTLTPKENARSCVNGT FT LVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDLDAASEASSEP FT DYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQL FT SPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANF FT LAEEMSKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLI FT DMRDLYQEWKEKVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPI FT ISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEIIHRVKKLTC FT RVKIKEATGLPLNLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCK FT DYVVNVTEEFLEFISDGALAIEVWGHRCAGNGSSIWEVDSLHAKTRTLHDRWNEVTRRI FT EMWISILELNELGEYAAVELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMV FT EAILSVSIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRRE FT YLDEQIKKVSNKTEKTEDDVEREAQLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPP FT PGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDDEVS FT ATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSF FT TQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTSDGETYI FT EKYTRGVLQVENILSLERLRQAIKEALSTKARHIRRSLSTPNVHNVSSSRPDLSGFDED FT DKGWPENQLDMSDYSSSYQDVACYGTLPRDSPRRNKEGCTSETPHALTVSPFKAFSPQP FT PKFFKPLMPVKEEHKKRIALEARPLLSQEDSEEEENELEAINRKLISSQPYVPVEFADF FT SVYNASLENREWFSSKVDLSNSRVLEKEVSRSPTTSSITSGYFSHSASNATLSDMVVPS FT SDSSDQLAIQTKDADSTEHSTPSLVHDFRPSSNKELTEVEKGLVKDKIIVVPLKENSAL FT AKGSPSSQSIPEKNSKSLCRTGSCSELDACPSKISQPARGFCPREVTVEHTTNILEDHS FT FTEFMGVSEGKDFDGLTDSSAGELSSRRSLPNKTGGKTVSDGLHHPSQLHSKLENDQVI FT IPEAAFWVLCCQ" FT polyA_site complement(17763926) FT polyA_signal complement(17763940..17763945) FT polyA_site complement(17771842) FT polyA_signal complement(17771855..17771860) FT misc_feature 17772784 FT /note="Clone_right_end: RP11-68J15" FT mRNA complement(join(17771842..17772290,17773709..17773814, FT 17775246..17775293,17777508..17777585,17779178..17779330, FT 17779823..17779915,17780961..17781137,17781408..17781532, FT 17783877..17783932,17785746..17785872,17788007..17788106, FT 17790103..17790141,17794480..17794626,17794803..17794935, FT 17796900..17797051,17799497..17799670,17800183..17800344, FT 17804592..17804741,17805706..17805846,17808999..17809161, FT 17817251..>17817431)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-003" FT /product="kinesin family member 13A" FT /note="match: ESTs: Em:BM010083" FT /note="match: cDNAs: Em:AK025303.1" FT CDS complement(join(17772127..17772290,17773709..17773814, FT 17775246..17775293,17777508..17777585,17779178..17779330, FT 17779823..17779915,17780961..17781137,17781408..17781532, FT 17783877..17783932,17785746..17785872,17788007..17788106, FT 17790103..17790141,17794480..17794626,17794803..17794935, FT 17796900..17797051,17799497..17799670,17800183..17800344, FT 17804592..17804741,17805706..17805846,17808999..17809161, FT 17817251..>17817431)) FT /codon_start=3 FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-003" FT /standard_name="OTTHUMP00000016073" FT /product="kinesin family member 13A" FT /protein_id="CAI40949.1" FT /translation="QYLEEKRSALEEQRLMYERELEQLRQQLSPDRQPQSSGPDRLAYS FT SQTAQQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANFLAEEMSKLTDYQVTLQI FT PAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKEKVPEAK FT RLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMR FT VTGAVPERVVEDDSSENSSESGSLEVVDSSGEIIHRVKKLTCRVKIKEATGLPLNLSNF FT VFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDG FT ALAIEVWGHRCAGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAA FT VELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSVSIGCVTARSTK FT LQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKTEKTE FT DDVEREAQLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNAD FT DLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDDEVSATASWDSSVHDSVHLNR FT VTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLKRRISLKNIFYSC FT GVTYEIVSNIPKATEEIEDRETLALLAARSENEGTSDGETYIEKYTRGVLQVENILSLE FT RLRQAVTVKEALSTKARHIRRSLSTPNVHNVSSSRPDLSGFDEDDKGWPENQLDMSDYS FT SSYQDVACYGTLPRDSPRRNKEGCTSETPHALTVSPFKAFSPQPPKFFKPLMPVKEEHK FT KRIALEARPLLSQEVNA" FT misc_feature 17848181 FT /note="Clone_left_end: RP3-525L6" FT misc_feature complement(17848381..18014388) FT /note="annotated region of clone" FT mRNA complement(join(AL138724.12:66392..67643, FT AL138724.12:73811..73915,AL138724.12:74605..74756, FT AL138724.12:76175..76280,AL138724.12:77712..77759, FT AL138724.12:79974..80041,AL138724.12:81640..81796, FT AL138724.12:82289..82381,AL138724.12:83427..83603, FT AL138724.12:83874..83998,AL138724.12:86343..86398, FT AL138724.12:88212..88338,AL138724.12:90473..90572, FT AL138724.12:92569..92607,AL138724.12:96946..97092, FT AL138724.12:97269..97401,AL138724.12:99366..99517, FT AL138724.12:101963..102136,AL138724.12:102649..102810, FT AL138724.12:107058..107207,AL138724.12:108172..108312, FT AL138724.12:111465..111627,AL138724.12:119717..119930, FT AL138724.12:128465..128631,AL138724.12:128735..128821, FT AL138724.12:130937..131067,AL138724.12:133798..133932, FT AL138724.12:136658..136768,AL138724.12:139575..139787, FT AL138724.12:140169..140280,17849608..17849720, FT 17850554..17850688,17852186..17852273,17855668..17855848, FT 17856261..17856353,17873608..17873668,17898399..17898411, FT 17987285..17987375,17987640..17987765)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-001" FT /product="kinesin family member 13A" FT /note="match: ESTs: Em:AA443259 Em:AA645826 Em:AA927630 FT Em:AI216393 Em:AI239594 Em:AI269288 Em:AI277715 Em:AI299016 FT Em:AI524805 Em:AI554574 Em:AI607200 Em:AI741619 Em:AI914504 FT Em:AV654336 Em:AW043963 Em:AW195590 Em:AW296537 Em:AW298458 FT Em:AW298525 Em:AW892660 Em:BB616793 Em:BE091805 Em:BE290686 FT Em:BE675263 Em:BE983842 Em:BE987475 Em:BF467522 FT Em:BI557303" FT /note="match: cDNAs: Em:AB001429.1 Em:AB001430.1 FT Em:AB037923.1 Em:AB074017.1 Em:AF279865.1 Em:AJ291578.1 FT Em:AJ291579.1 Em:AK020905.1 Em:AY014403.1 Em:AY014404.1 FT Em:BC005977.1" FT mRNA complement(join(AL138724.12:66392..67643, FT AL138724.12:74605..74756,AL138724.12:76175..76280, FT AL138724.12:77712..77759,AL138724.12:79974..80041, FT AL138724.12:81640..81796,AL138724.12:82289..82381, FT AL138724.12:83427..83603,AL138724.12:83874..83998, FT AL138724.12:86343..86398,AL138724.12:88212..88338, FT AL138724.12:90473..90572,AL138724.12:92569..92607, FT AL138724.12:96946..97092,AL138724.12:97269..97401, FT AL138724.12:99366..99517,AL138724.12:101963..102136, FT AL138724.12:102649..102810,AL138724.12:107058..107207, FT AL138724.12:108172..108312,AL138724.12:111465..111627, FT AL138724.12:119717..119930,AL138724.12:128465..128631, FT AL138724.12:128735..128821,AL138724.12:130937..131067, FT AL138724.12:133798..133932,AL138724.12:136658..136768, FT AL138724.12:139575..139787,AL138724.12:140169..140280, FT 17849608..17849720,17850554..17850688,17852186..17852273, FT 17855668..17855848,17856261..17856353,17873608..17873668, FT 17898399..17898411,17987285..17987375,17987640..17987765)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-002" FT /product="kinesin family member 13A" FT /note="match: cDNAs: Em:AB037923.1 Em:AJ291578.1 FT Em:AJ291579.1 Em:AY014404.1" FT CDS complement(join(AL138724.12:66807..67643, FT AL138724.12:73811..73915,AL138724.12:74605..74756, FT AL138724.12:76175..76280,AL138724.12:77712..77759, FT AL138724.12:79974..80041,AL138724.12:81640..81796, FT AL138724.12:82289..82381,AL138724.12:83427..83603, FT AL138724.12:83874..83998,AL138724.12:86343..86398, FT AL138724.12:88212..88338,AL138724.12:90473..90572, FT AL138724.12:92569..92607,AL138724.12:96946..97092, FT AL138724.12:97269..97401,AL138724.12:99366..99517, FT AL138724.12:101963..102136,AL138724.12:102649..102810, FT AL138724.12:107058..107207,AL138724.12:108172..108312, FT AL138724.12:111465..111627,AL138724.12:119717..119930, FT AL138724.12:128465..128631,AL138724.12:128735..128821, FT AL138724.12:130937..131067,AL138724.12:133798..133932, FT AL138724.12:136658..136768,AL138724.12:139575..139787, FT AL138724.12:140169..140280,17849608..17849720, FT 17850554..17850688,17852186..17852273,17855668..17855848, FT 17856261..17856353,17873608..17873668,17898399..17898411, FT 17987285..17987375,17987640..17987694)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-001" FT /standard_name="OTTHUMP00000016071" FT /product="kinesin family member 13A" FT /note="match: proteins: Sw:O35787 Sw:O43896 Sw:O60333 FT Sw:O88658 Sw:P33173 Sw:Q12756 Sw:Q60575 Sw:Q9EQW7 Sw:Q9H1H9 FT Sw:Q9NQT8 Tr:O01349 Tr:Q8VI89 Tr:Q9H193 Tr:Q9H194 FT Tr:Q9NBL1" FT /protein_id="CAI21670.1" FT /translation="MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTK FT QGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQT FT GSGKSFSMMGHAEQLGLIPRLCCALFKRISLEQNESQTFKVEVSYMEIYNEKVRDLLDP FT KGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSH FT AVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTT FT LGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETL FT STLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEES FT EKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLEMSGIKVGDDKCYLVNLNADPAL FT NELLVYYLKDHTRVGADTSQDIQLFGIGIQPQHCEIDIASDGDVTLTPKENARSCVNGT FT LVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDLDAASEASSEP FT DYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQL FT SPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANF FT LAEEMSKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLI FT DMRDLYQEWKEKVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPI FT ISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEIIHRVKKLTC FT RVKIKEATGLPLNLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCK FT DYVVNVTEEFLEFISDGALAIEVWGHRCAGNGSSIWEVDSLHAKTRTLHDRWNEVTRRI FT EMWISILELNELGEYAAVELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMV FT EAILSVSIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRRE FT YLDEQIKKVSNKTEKTEDDVEREAQLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPP FT PGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDDEVS FT ATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSF FT TQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTSDGETYI FT EKYTRGVLQVENILSLERLRQAIKEALSTKARHIRRSLSTPNVHNVSSSRPDLSGFDED FT DKGWPENQLDMSDYSSSYQDVACYGTLPRDSPRRNKEGCTSETPHALTVSPFKAFSPQP FT PKFFKPLMPVKEEHKKRIALEARPLLSQESMPPPQAHNPGCIVPSGSNGSSMPVEHNSK FT REKKIDSEEEENELEAINRKLISSQPYVPVEFADFSVYNASLENREWFSSKVDLSNSRV FT LEKEVSRSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLAIQTKDADSTEHSTPSL FT VHDFRPSSNKELTEVEKGLVKDKIIVVPLKENSALAKGSPSSQSIPEKNSKSLCRTGSC FT SELDACPSKISQPARGFCPREVTVEHTTNILEDHSFTEFMGVSEGKDFDGLTDSSAGEL FT SSRRSLPNKTGGKTVSDGLHHPSQLHSKLENDQVIIPEAAFWVLCCQ" FT CDS complement(join(AL138724.12:66807..67643, FT AL138724.12:74605..74756,AL138724.12:76175..76280, FT AL138724.12:77712..77759,AL138724.12:79974..80041, FT AL138724.12:81640..81796,AL138724.12:82289..82381, FT AL138724.12:83427..83603,AL138724.12:83874..83998, FT AL138724.12:86343..86398,AL138724.12:88212..88338, FT AL138724.12:90473..90572,AL138724.12:92569..92607, FT AL138724.12:96946..97092,AL138724.12:97269..97401, FT AL138724.12:99366..99517,AL138724.12:101963..102136, FT AL138724.12:102649..102810,AL138724.12:107058..107207, FT AL138724.12:108172..108312,AL138724.12:111465..111627, FT AL138724.12:119717..119930,AL138724.12:128465..128631, FT AL138724.12:128735..128821,AL138724.12:130937..131067, FT AL138724.12:133798..133932,AL138724.12:136658..136768, FT AL138724.12:139575..139787,AL138724.12:140169..140280, FT 17849608..17849720,17850554..17850688,17852186..17852273, FT 17855668..17855848,17856261..17856353,17873608..17873668, FT 17898399..17898411,17987285..17987375,17987640..17987694)) FT /gene="KIF13A" FT /locus_tag="RP11-500C11.2-002" FT /standard_name="OTTHUMP00000016072" FT /product="kinesin family member 13A" FT /note="match: proteins: Sw:P33173 Sw:Q12756 Sw:Q60575 FT Sw:Q9NQT8 Tr:O01349 Tr:Q20888 Tr:Q9NBL1 Tr:Q9NGQ2" FT /protein_id="CAI21671.1" FT /translation="MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTK FT QGERKPPKVFAFDYCFWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQT FT GSGKSFSMMGHAEQLGLIPRLCCALFKRISLEQNESQTFKVEVSYMEIYNEKVRDLLDP FT KGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSH FT AVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTT FT LGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETL FT STLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEES FT EKLIKELTVTWEEKLRKTEEIAQERQRQLESMGISLEMSGIKVGDDKCYLVNLNADPAL FT NELLVYYLKDHTRVGADTSQDIQLFGIGIQPQHCEIDIASDGDVTLTPKENARSCVNGT FT LVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETGPPEHDLDAASEASSEP FT DYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQLRQQL FT SPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANF FT LAEEMSKLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLI FT DMRDLYQEWKEKVPEAKRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPI FT ISQQGEVAGRLHVEVMRVTGAVPERVVEDDSSENSSESGSLEVVDSSGEIIHRVKKLTC FT RVKIKEATGLPLNLSNFVFCQYTFWDQCESTVAAPVVDPEVPSPQSKDAQYTVTFSHCK FT DYVVNVTEEFLEFISDGALAIEVWGHRCAGNGSSIWEVDSLHAKTRTLHDRWNEVTRRI FT EMWISILELNELGEYAAVELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMV FT EAILSVSIGCVTARSTKLQRGLDSYQRDDEDGDDMDSYQEEDLNCVRERWSDALIKRRE FT YLDEQIKKVSNKTEKTEDDVEREAQLVEQWVGLTEERNAVLVPAPGSGIPGAPADWIPP FT PGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDDEVS FT ATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSF FT TQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTSDGETYI FT EKYTRGVLQVENILSLERLRQAIKEALSTKARHIRRSLSTPNVHNVSSSRPDLSGFDED FT DKGWPENQLDMSDYSSSYQDVACYGTLPRDSPRRNKEGCTSETPHALTVSPFKAFSPQP FT PKFFKPLMPVKEEHKKRIALEARPLLSQEDSEEEENELEAINRKLISSQPYVPVEFADF FT SVYNASLENREWFSSKVDLSNSRVLEKEVSRSPTTSSITSGYFSHSASNATLSDMVVPS FT SDSSDQLAIQTKDADSTEHSTPSLVHDFRPSSNKELTEVEKGLVKDKIIVVPLKENSAL FT AKGSPSSQSIPEKNSKSLCRTGSCSELDACPSKISQPARGFCPREVTVEHTTNILEDHS FT FTEFMGVSEGKDFDGLTDSSAGELSSRRSLPNKTGGKTVSDGLHHPSQLHSKLENDQVI FT IPEAAFWVLCCQ" FT CDS <17953803..17954161 FT /pseudo FT /locus_tag="RP3-525L6.2-001" FT /product="ribosomal protein S12 (RPS12) pseudogene" FT /note="match: proteins: Sw:P25398 Sw:P46405 Sw:P63324 FT Tr:Q6ZWZ6 Tr:Q76M58 Tr:Q90YR2 Tr:Q962R7" FT misc_feature complement(17876623..17876859) FT /note="weak data" FT misc_feature complement(17857708..17857984) FT /note="Single clone region. short insert library" FT misc_feature 18016388 FT /note="Clone_right_end: RP3-525L6" FT misc_feature 18019982..18020321 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 18037677 FT /note="Clone_left_end: RP11-204B7" FT misc_feature 18039677..18185603 FT /note="annotated region of clone" FT misc_feature 18100775 FT /note="Clone_right_end: RP11-356B7" FT mRNA complement(18121650..18122837) FT /locus_tag="RP11-204B7.2-001" FT /product="novel protein similar to tripartite motif protein FT TRIM32" FT CDS complement(18121650..18122837) FT /locus_tag="RP11-204B7.2-001" FT /standard_name="OTTHUMP00000016074" FT /product="novel protein similar to tripartite motif protein FT TRIM32" FT /note="match: proteins: Sw:O70277 Sw:Q13049 Sw:Q9C040 FT Sw:Q9R1R2" FT /protein_id="CAH71232.1" FT /translation="MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNLS FT CGHVVCLACVAALAHPRTLALECPFCRRACRGCDTSDCLPVLHLIELLGSALRQSPAAH FT RAAPSAPGALTCHHTFGGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGCAHQ FT FGEKGDAAQDIRYPVDVTITNDCHVVVTDAGDRSIKVFDFFGQIKLVIGGQFSLPWGVE FT TTPQNGIVVTDAEAGSLHLLDVDFAEGVLRRTERLQAHLCNPRGVAVSWLTGAIAVLEH FT PLALGTGVCSTRVKVFSSSMQLVGQVDTFGLSLYFPSKITASAVTFDHQGNVIVADTSG FT PAILCLGKPEEFPVPKPMVTHGLSHPVALTFTKENSLLVLDTASHSIKVYKVDWG" FT polyA_site complement(18128542) FT polyA_signal complement(18128565..18128570) FT CDS complement(join(18130899..18131011,18132364..18132408, FT 18134035..18134120,18139194..18139268,18139896..18139948, FT 18143827..18143959,18148054..18148146,18149219..18149358)) FT /gene="TPMT" FT /locus_tag="RP11-204B7.1-001" FT /standard_name="OTTHUMP00000016076" FT /product="thiopurine S-methyltransferase" FT /note="match: proteins: Sw:O55060 Sw:P51580 Sw:Q9Z0T0" FT /protein_id="CAH71233.1" FT /translation="MDGTRTSLDIEEYSDTEVQKNQVLTLEEWQDKWVNGKTAFHQEQG FT HQLLKKHLDTFLKGKSGLRVFFPLCGKAVEMKWFADRGHSVVGVEISELGIQEFFTEQN FT LSYSEEPITEIPGTKVFKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDR FT KCYADTMFSLLGKKFQYLLCVLSYDPTKHPGPPFYVPHAEIERLFGKICNIRCLEKVDA FT FEERHKSWGIDCLFEKLYLLTEK" FT mRNA complement(join(18128542..18131011,18132364..18132408, FT 18134035..18134120,18139194..18139268,18139896..18139948, FT 18143827..18143959,18148054..18148146,18149219..18149402, FT 18155264..18155305)) FT /gene="TPMT" FT /locus_tag="RP11-204B7.1-001" FT /product="thiopurine S-methyltransferase" FT /note="match: ESTs: Em:AI907547 Em:AL598978 Em:AL601228 FT Em:AV733154 Em:AV734954 Em:BE172818 Em:BE621985 Em:BE894414 FT Em:BF032021 Em:BF184190 Em:BF184993 Em:BF208135 Em:BF213212 FT Em:BF248293 Em:BF678159 Em:BF688158 Em:BF691485 Em:BF692437 FT Em:BF700080 Em:BF979098 Em:BG393234 Em:BG428131 Em:BG492651 FT Em:BG494322 Em:BG539049 Em:BG575051 Em:BG617667 Em:BG724283 FT Em:BI545939 Em:BI598325 Em:BI837737 Em:BI862315" FT /note="match: cDNAs: Em:AF021876.1 Em:AF021877.1 FT Em:AF037043.1 Em:AF037044.1 Em:AF037045.1 Em:AF037046.1 FT Em:AF037047.1 Em:AF046887.1 Em:AF120100.1 Em:AK002335.1 FT Em:AK019205.1 Em:BC005339.1 Em:BC009596.1 Em:BC021598.1 FT Em:S62904.1 Em:U12387.1" FT mRNA join(18155683..18155802,18156114..18156157, FT 18160114..18160213,18161558..18161685,18163066..18163155, FT 18166498..18166609,18171594..18171710, FT complement(AL031774.1:108951..108989), FT complement(AL031774.1:97528..97704), FT complement(AL031774.1:97100..97174), FT complement(AL031774.1:94185..94322), FT complement(AL031774.1:87232..87363), FT complement(AL031774.1:86555..86629), FT complement(AL031774.1:82157..82273), FT complement(AL031774.1:80980..81105), FT complement(AL031774.1:79632..79754), FT complement(AL031774.1:76876..77028), FT complement(AL031774.1:70908..72852)) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-002" FT /product="amine oxidase (flavin containing) domain 1" FT /note="match: cDNAs: Em:AK125318.1" FT mRNA join(18155762..18155802,18160114..18160213, FT 18161558..18161685,18163066..18163155,18166498..18166609, FT 18171594..18171710,complement(AL031774.1:108951..108989), FT complement(AL031774.1:106759..106969), FT complement(AL031774.1:103380..103564), FT complement(AL031774.1:97528..97704), FT complement(AL031774.1:97100..97174), FT complement(AL031774.1:94185..94322), FT complement(AL031774.1:93104..93275), FT complement(AL031774.1:89097..89224), FT complement(AL031774.1:87232..87363), FT complement(AL031774.1:86555..86629), FT complement(AL031774.1:82157..82273), FT complement(AL031774.1:80980..81105), FT complement(AL031774.1:79632..79748), FT complement(AL031774.1:76876..77028), FT complement(AL031774.1:72063..72852)) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-003" FT /product="amine oxidase (flavin containing) domain 1" FT /note="match: cDNAs: Em:AK091428.1" FT CDS join(18160127..18160213,18161558..18161685, FT 18163066..18163155,18166498..18166609,18171594..18171710, FT complement(AL031774.1:108951..108989), FT complement(AL031774.1:97528..97704), FT complement(AL031774.1:97100..97174), FT complement(AL031774.1:94185..94322), FT complement(AL031774.1:87232..87363), FT complement(AL031774.1:86555..86629), FT complement(AL031774.1:82157..82273), FT complement(AL031774.1:80980..81105), FT complement(AL031774.1:79632..79754), FT complement(AL031774.1:76876..77028), FT complement(AL031774.1:72769..72852)) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-002" FT /standard_name="OTTHUMP00000179124" FT /product="amine oxidase (flavin containing) domain 1" FT /protein_id="CAM14159.1" FT /translation="MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGG FT SEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHK FT DGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQI FT AKTYRCGMKPNTAIKPETSDHCSLPEDLEALTPQKCIPHIIVRGLVRIRCVQEVERILY FT FMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEA FT KDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQVSARSWDHNEFFAQFAGDH FT TLLTPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLAL FT LQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASK FT RGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDP FT TKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGA FT YLSGVREASKIAAF" FT CDS join(18160127..18160213,18161558..18161685, FT 18163066..18163155,18166498..18166609,18171594..18171710, FT complement(AL031774.1:108951..108989), FT complement(AL031774.1:106759..106969), FT complement(AL031774.1:103380..103564), FT complement(AL031774.1:97528..97704), FT complement(AL031774.1:97100..97174), FT complement(AL031774.1:94185..94322), FT complement(AL031774.1:93104..93275), FT complement(AL031774.1:89097..89224), FT complement(AL031774.1:87232..87363), FT complement(AL031774.1:86555..86629), FT complement(AL031774.1:82157..82273), FT complement(AL031774.1:80980..81105), FT complement(AL031774.1:79632..79748), FT complement(AL031774.1:76876..77028), FT complement(AL031774.1:72769..72852)) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-003" FT /standard_name="OTTHUMP00000179125" FT /product="amine oxidase (flavin containing) domain 1" FT /protein_id="CAM14160.1" FT /translation="MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGG FT SEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHK FT DGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQI FT AKTYRCGMKPNTAIKPETSDHCSLPEDLRVLEVSNHWWYSMLILPPLLKDSVAAPLLSA FT YYPDCVGMSPSCTSTNRAAATGNASPGKLEHSKAALSVHVPGMNRYFQPFYQPNECGKA FT LCVRPDVMELDELYEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGL FT VRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAAR FT QLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISM FT HKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIY FT KAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLT FT PGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKG FT AIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLF FT AVFYDMDPQHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVT FT RWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVR FT EASKIAAF" FT misc_feature 18183504 FT /note="Clone_left_end: RP1-298J15" FT misc_feature complement(18185604..18292991) FT /note="annotated region of clone" FT mRNA complement(join(18224400..18225961,18226405..18226473, FT 18236683..18236831,18237612..18237747,18249882..18250070, FT 18255962..18256082,18256592..18256686,18258184..18258293, FT 18258535..18258636,18264074..18264227,18264616..18265054)) FT /gene="DEK" FT /locus_tag="RP1-298J15.1-001" FT /product="DEK oncogene (DNA binding)" FT /note="match: ESTs: Em:AI744221.1 Em:BQ574048.1 FT Em:CT004744.1" FT /note="match: cDNAs: Em:BC035259.1 Em:X64229.1" FT CDS complement(join(18225950..18225961,18226405..18226473, FT 18236683..18236831,18237612..18237747,18249882..18250070, FT 18255962..18256082,18256592..18256686,18258184..18258293, FT 18258535..18258636,18264074..18264218)) FT /gene="DEK" FT /locus_tag="RP1-298J15.1-001" FT /standard_name="OTTHUMP00000016078" FT /product="DEK oncogene (DNA binding)" FT /note="match: proteins: Sw:P35659.1" FT /protein_id="CAI20082.2" FT /translation="MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEE FT EEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSKKKTD FT ELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSICEV FT LDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKC FT PEILSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSAN FT VKKADSSTTKKNQNSSKKESESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEE FT VTMKQICKKVYENYPTYDLTERKDFIKTTVKELIS" FT polyA_signal complement(18224421..18224426) FT polyA_site complement(18224400) FT polyA_site 18224085 FT polyA_signal 18224060..18224065 FT mRNA join(<18186019..18186041,18188023..18188233, FT 18191428..18191612,18197288..18197464,18197818..18197892, FT 18200670..18200807,18201717..18201888,18205768..18205895, FT 18207629..18207760,18208360..18208437,18212719..18212835, FT 18213887..18214012,18215238..18215360,18217964..18218116, FT 18222140..18222346) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-004" FT /product="amine oxidase (flavin containing) domain 1" FT /note="match: ESTs: Em:AA332652.1 Em:AA378845.1 FT Em:AW449768.1 Em:AW902993.1 Em:AW964175.1 Em:AW999369.1 FT Em:BB627496.1 Em:BE170475.1 Em:BE308549.1 Em:BE752464.1 FT Em:BG337767.1 Em:BG747962.1 Em:BG748119.1 Em:BG981327.1" FT /note="match: cDNAs: Em:AK091428.1 Em:AX746977.1 FT Em:BC012148.1" FT CDS join(<18186019..18186041,18188023..18188233, FT 18191428..18191612,18197288..18197464,18197818..18197892, FT 18200670..18200807,18201717..18201888,18205768..18205895, FT 18207629..18207760,18208360..18208437,18212719..18212835, FT 18213887..18214012,18215238..18215360,18217964..18218116, FT 18222140..18222223) FT /codon_start=3 FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-004" FT /standard_name="OTTHUMP00000179126" FT /product="amine oxidase (flavin containing) domain 1" FT /protein_id="CAM28215.1" FT /translation="CSLPEDLRVLEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVG FT MSPSCTSTNRAAATGNASPGKLEHSKAALSVHVPGMNRYFQPFYQPNECGKALCVRPDV FT MELDELYEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQ FT EVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGI FT KVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERC FT DLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKES FT GIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVII FT EKLAEGLDIQLKSPQVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNP FT PLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDM FT DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWST FT DPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASK FT IAAF" FT mRNA join(AL589723.7:118007..118126,AL589723.7:118438..118481, FT AL589723.7:122438..122537,AL589723.7:123882..124009, FT AL589723.7:125390..125479,AL589723.7:128822..128933, FT AL589723.7:133918..134034,18186003..18186041, FT 18197288..18197464,18197818..18197892,18200670..18200807, FT 18207629..18207760,18208363..18208437,18212719..18212835, FT 18213887..18214012,18215238..18215360,18217964..18218116, FT 18222140..18224084) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-002" FT /product="amine oxidase (flavin containing) domain 1" FT /note="match: cDNAs: Em:AK125318.1" FT mRNA join(AL589723.7:118086..118126,AL589723.7:122438..122537, FT AL589723.7:123882..124009,AL589723.7:125390..125479, FT AL589723.7:128822..128933,AL589723.7:133918..134034, FT 18186003..18186041,18188023..18188233,18191428..18191612, FT 18197288..18197464,18197818..18197892,18200670..18200807, FT 18201717..18201888,18205768..18205895,18207629..18207760, FT 18208363..18208437,18212719..18212835,18213887..18214012, FT 18215244..18215360,18217964..18218116,18222140..18222929) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-003" FT /product="amine oxidase (flavin containing) domain 1" FT /note="match: cDNAs: Em:AK091428.1" FT CDS join(AL589723.7:122451..122537,AL589723.7:123882..124009, FT AL589723.7:125390..125479,AL589723.7:128822..128933, FT AL589723.7:133918..134034,18186003..18186041, FT 18197288..18197464,18197818..18197892,18200670..18200807, FT 18207629..18207760,18208363..18208437,18212719..18212835, FT 18213887..18214012,18215238..18215360,18217964..18218116, FT 18222140..18222223) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-002" FT /standard_name="OTTHUMP00000179124" FT /product="amine oxidase (flavin containing) domain 1" FT /protein_id="CAM28217.1" FT /translation="MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGG FT SEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHK FT DGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQI FT AKTYRCGMKPNTAIKPETSDHCSLPEDLEALTPQKCIPHIIVRGLVRIRCVQEVERILY FT FMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEA FT KDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQVSARSWDHNEFFAQFAGDH FT TLLTPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLAL FT LQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASK FT RGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDP FT TKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGA FT YLSGVREASKIAAF" FT CDS join(AL589723.7:122451..122537,AL589723.7:123882..124009, FT AL589723.7:125390..125479,AL589723.7:128822..128933, FT AL589723.7:133918..134034,18186003..18186041, FT 18188023..18188233,18191428..18191612,18197288..18197464, FT 18197818..18197892,18200670..18200807,18201717..18201888, FT 18205768..18205895,18207629..18207760,18208363..18208437, FT 18212719..18212835,18213887..18214012,18215244..18215360, FT 18217964..18218116,18222140..18222223) FT /gene="AOF1" FT /locus_tag="RP11-204B7.3-003" FT /standard_name="OTTHUMP00000179125" FT /product="amine oxidase (flavin containing) domain 1" FT /protein_id="CAM28216.1" FT /translation="MATPRGRTKKKASFDHSPDSLPLRSSGRQAKKKATETTDEDEDGG FT SEKKYRKCEKAGCTATCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHK FT DGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQI FT AKTYRCGMKPNTAIKPETSDHCSLPEDLRVLEVSNHWWYSMLILPPLLKDSVAAPLLSA FT YYPDCVGMSPSCTSTNRAAATGNASPGKLEHSKAALSVHVPGMNRYFQPFYQPNECGKA FT LCVRPDVMELDELYEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGL FT VRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAAR FT QLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISM FT HKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIY FT KAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLT FT PGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKG FT AIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLF FT AVFYDMDPQHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVT FT RWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVR FT EASKIAAF" FT misc_feature 18294993 FT /note="Clone_right_end: RP1-298J15" FT misc_feature 18321355 FT /note="Clone_left_end: RP11-528A10" FT misc_feature 18323355..18487007 FT /note="annotated region of clone" FT misc_feature 18354962 FT /note="Clone_right_end: RP11-14J16" FT CDS complement(18363648..18365333) FT /pseudo FT /locus_tag="RP11-528A10.2-001" FT /product="RNA helicase pseudogene" FT /note="match: proteins: Sw:P20448 Sw:P32892 Sw:P34580 FT Sw:P81294 Sw:Q03532 Sw:Q09916 Sw:Q13206 Sw:Q56XG6 Sw:Q62523 FT Sw:Q9NVP1 Sw:Q9UTP9" FT CDS complement(join(18366970..18367285,18367595..18368874)) FT /pseudo FT /locus_tag="RP11-528A10.1-001" FT /product="IMP (inosine monophosphate) dehydrogenase 1 FT (IMPDH1) pseudogene" FT /note="match: proteins: Sw:O00086 Sw:O14344 Sw:P12268 FT Sw:P12269 Sw:P20839 Sw:P21620 Sw:P24547 Sw:P38697 Sw:P39567 FT Sw:P47996 Sw:P50094 Sw:P50095 Sw:P50096 Sw:P50098 Sw:P81294 FT Sw:Q07152 Sw:Q62523 Tr:O81282 Tr:P78758 Tr:Q9RHZ0 Tr:Q9UVL0 FT Tr:Q9X168 Tr:Q9ZPA0" FT mRNA join(18387581..18387861,18399730..18399930, FT 18427812..18427916,18439915..18439975,18457386..18457590, FT 18459838..18459982,18463522..18463611,18465158..18469105) FT /gene="IBRDC2" FT /locus_tag="RP11-528A10.3-001" FT /product="IBR domain containing 2" FT /note="match: ESTs: Em:CA313152.1" FT /note="match: cDNAs: Em:AK096832.1 Em:AL832329.1 FT Em:BC063311.1" FT mRNA join(18387745..18387861,18399730..18399930, FT 18402188..18402326) FT /gene="IBRDC2" FT /locus_tag="RP11-528A10.3-002" FT /product="IBR domain containing 2" FT /note="match: ESTs: Em:AI307777 Em:BE274992 Em:BF038505" FT CDS join(18399766..18399930,18427812..18427916, FT 18439915..18439975,18457386..18457590,18459838..18459982, FT 18463522..18463611,18465158..18465298) FT /gene="IBRDC2" FT /locus_tag="RP11-528A10.3-001" FT /standard_name="OTTHUMP00000016079" FT /product="IBR domain containing 2" FT /note="match: proteins: Sw:P50876.1" FT /protein_id="CAI15148.2" FT /translation="MGSAGRLHYLAMTAENPTPGDLAPAPLITCKLCLCEQSLDKMTTL FT QECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQ FT RLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECPSCHLKFCSCCKDAWHAE FT VSCRDSQPIVLPTEHRALFGTDAEAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYC FT LQNLDNDIFLRHYDKGPCRNKLGHSRASVMWNRTQVVGILVGLGIIALVTSPLLLLASP FT CIICCVCKSCRGKKKKHDPSTT" FT misc_feature 18421099 FT /note="Clone_left_end: RP3-383A10" FT polyA_signal 18469083..18469088 FT polyA_site 18469105 FT misc_feature 18485007 FT /note="Clone_right_end: RP11-528A10" FT misc_feature 18516635 FT /note="Clone_left_end: RP1-242N11" FT misc_feature 18688925 FT /note="Clone_left_end: RP3-437L21" FT misc_feature 18804563 FT /note="Clone_right_end: RP1-95I21" FT misc_feature 18828810 FT /note="Clone_right_end: RP3-437L21" FT misc_feature 18829725 FT /note="Clone_left_end: RP11-408C8" FT misc_feature 18953245 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 35bp by BAMHI restriction enzyme digest data" FT misc_feature 18965424 FT /note="Clone_right_end: RP11-513I13" FT misc_feature 18971381 FT /note="Clone_left_end: RP3-501F10" FT misc_feature complement(18971680) FT /note="Clone_right_end: RP1-239K6" FT misc_feature 19026679..19131740 FT /note="annotated region of clone" FT mRNA join(19043980..19044144,19061036..19061067) FT /locus_tag="RP1-239K6.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA387184" FT misc_feature 19131741..19174524 FT /note="annotated region of clone" FT misc_feature 19138086..19138189 FT /note="Sequence from clone pcr only" FT CDS 19143929..19144391 FT /pseudo FT /locus_tag="RP11-254A17.1-001" FT /product="ribosomal protein L21 (RPL21) pseudogene" FT /note="match: proteins: Sw:O09167 Sw:O42706 Sw:O82574 FT Sw:P20280 Sw:P34334 Sw:P38653 Sw:P46778 Sw:P49666 Sw:P49667 FT Sw:Q02753 Sw:Q12672 Sw:Q43291 Tr:Q42194 Tr:Q9V9M7 FT Tr:Q9ZSU8" FT misc_feature 19174325 FT /note="Clone_left_end: RP3-324L9" FT misc_feature 19273877 FT /note="Clone_right_end: RP3-477B23" FT misc_feature 19273978..19380165 FT /note="annotated region of clone" FT mRNA complement(join(19290550..19290826,19321149..19321252)) FT /locus_tag="RP11-686D16.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI827914" FT misc_feature 19345084..19345091 FT /note="Tandem repeat. Sequence confirmed by AC025694 FT sequenced by WUGSC" FT CDS 19348412..19349294 FT /pseudo FT /locus_tag="RP11-686D16.2-001" FT /product="ribosomal protein L5 (RPL5) (MSTP030) pseudogene" FT /note="match: proteins: Sw:O44248 Sw:O59953 Sw:O76190 FT Sw:P09895 Sw:P15125 Sw:P19949 Sw:P22451 Sw:P46777 Sw:P46777 FT Sw:P47962 Sw:P47962 Sw:P49405 Sw:P52822 Sw:Q8LBI1 Sw:Q8LBI1 FT Tr:O15588 Tr:Q90YW5 Tr:Q90YW6 Tr:Q9AVH1 Tr:Q9BUV4 Tr:Q9NIU2 FT Tr:Q9W5R8 Tr:Q9W5R8 Tr:Q9Y0H6" FT misc_feature 19380065 FT /note="Clone_right_end: RP11-686D16" FT misc_feature 19398868 FT /note="Clone_left_end: RP11-433B13" FT misc_feature 19415404..19415570 FT /note="Sequence confirmed by AC025694, sequenced by WUGSC" FT misc_feature 19479847 FT /note="Clone_right_end: RP11-295H23" FT misc_feature 19501648 FT /note="Clone_left_end: RP1-167F1" FT misc_feature 19501848..19626802 FT /note="annotated region of clone" FT mRNA complement(join(19535175..19535260,19538544..19538700, FT 19539014..19539220,AL391054.10:14010..14112)) FT /locus_tag="RP1-167F1.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI753564" FT CDS 19612991..19614266 FT /pseudo FT /locus_tag="RP1-167F1.1-001" FT /product="keratin 18 (KRT18) pseudogene" FT /note="match: proteins: Sw:O76014 Sw:O76015 Sw:O77788 FT Sw:O93256 Sw:O93532 Sw:P02533 Sw:P02535 Sw:P05781 Sw:P05782 FT Sw:P05783 Sw:P05784 Sw:P06394 Sw:P08552 Sw:P08727 Sw:P08728 FT Sw:P08777 Sw:P08778 Sw:P08802 Sw:P12035 Sw:P13645 Sw:P19001 FT Sw:P23729 Sw:P25030 Sw:P35527 Sw:Q10758 Sw:Q5BJY9 Sw:Q61414 FT Sw:Q61781 Sw:Q64291 Sw:Q90303 Tr:O18740 Tr:O57607 Tr:O57611 FT Tr:P87360 Tr:P97598 Tr:Q06018 Tr:Q07426 Tr:Q07427 Tr:Q13092 FT Tr:Q14664 Tr:Q15899 Tr:Q91357 Tr:Q91404" FT misc_feature 19626803..19646997 FT /note="annotated region of clone" FT misc_feature 19634847..19634963 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS complement(join(19638271..19638451,19638851..>19639429)) FT /pseudo FT /locus_tag="RP1-228J4.1-001" FT /product="ubiquinol-cytochrome c reductase, Rieske FT iron-sulfur polypeptide 1 (UQCRFS1) pseudogene" FT /note="match: proteins: Sw:P07056 Sw:P08067 Sw:P13272 FT Sw:P20788 Sw:P47985 Sw:P47985 Sw:P47985 Sw:P51133 Sw:P51134 FT Sw:Q09154 Sw:Q9CR68 Sw:Q9CR68 Tr:O44512 Tr:Q42703 Tr:Q92IR2 FT Tr:Q92PE6 Tr:Q94JS0 Tr:Q95341 Tr:Q9AAX0 Tr:Q9LYR2 Tr:Q9LYR3 FT Tr:Q9SMH6 Tr:Q9VQ28 Tr:Q9VQ29" FT mRNA complement(join(AL022068.2:33428..33513, FT AL022068.2:36797..36953,AL022068.2:37267..37473, FT 19640712..19640814)) FT /locus_tag="RP1-167F1.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI753564" FT misc_feature 19646798 FT /note="Clone_left_end: RP3-471C18" FT misc_feature 19646998..19755690 FT /note="annotated region of clone" FT mRNA complement(join(19730658..19731010,19734682..19734798)) FT /locus_tag="RP3-471C18.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA961468 Em:AA969614" FT mRNA complement(join(19740408..19740469,19744262..19744365, FT 19749879..19749924)) FT /locus_tag="RP3-471C18.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI811340" FT mRNA complement(join(19690056..19690105,19749879..19749989, FT 19753315..19753344)) FT /locus_tag="RP3-471C18.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BM352801" FT misc_feature 19755590 FT /note="Clone_right_end: RP3-471C18" FT misc_feature complement(19755691..19910612) FT /note="annotated region of clone" FT mRNA join(19837617..19838426,19838815..19838873, FT 19839441..19840915) FT /gene="ID4" FT /locus_tag="RP4-625H18.3-001" FT /product="inhibitor of DNA binding 4, dominant negative FT helix-loop-helix protein" FT /note="match: ESTs: Em:AA008963 Em:AA044943 Em:AA108736 FT Em:AA222769 Em:AA228265 Em:AA230021 Em:AA267680 Em:AA283186 FT Em:AA284765 Em:AA292346 Em:AA360044 Em:AA384132 Em:AA384817 FT Em:AA394164 Em:AA405766 Em:AA405847 Em:AA410247 Em:AA410595 FT Em:AA410596 Em:AA427892 Em:AA433882 Em:AA434383 Em:AA436359 FT Em:AA452493 Em:AA453341 Em:AA464151 Em:AA464856 Em:AA480072 FT Em:AA482694 Em:AA483691 Em:AA484850 Em:AA513037 Em:AA516076 FT Em:AA532381 Em:AA618566 Em:AA621627 Em:AA621928 Em:AA628493 FT Em:AA628503 Em:AA628533 Em:AA629360 Em:AA668713 Em:AA693503 FT Em:AA718865 Em:AA726837 Em:AA730651 Em:AA730790 Em:AA759378 FT Em:AA778568 Em:AA818860 Em:AA840438 Em:AA884934 Em:AA892021 FT Em:AA935345 Em:AA935871 Em:AA944139 Em:AA971551 Em:AA971743 FT Em:AA977253 Em:AA997043 Em:AA997986 Em:AI007907 Em:AI030517 FT Em:AI044710 Em:AI045750 Em:AI057105 Em:AI072202 Em:AI076496 FT Em:AI080656 Em:AI081377 Em:AI089906 Em:AI094082 Em:AI094921 FT Em:AI136166 Em:AI139706 Em:AI146316 Em:AI184689 Em:AI188065 FT Em:AI199202 Em:AI202319 Em:C20741 Em:D45510 Em:D52937 FT Em:D60215 Em:D62106 Em:D62153 Em:D62481 Em:D62553 Em:D79412 FT Em:F13013 Em:H30039 Em:H30894 Em:H97932 Em:H98616 Em:N83844 FT Em:N99650 Em:R20393 Em:R43511 Em:R73731 Em:R80152 Em:R80885 FT Em:T75442 Em:W48392 Em:W77144 Em:Z36959 Em:Z42701" FT /note="match: cDNAs: Em:BC014941.1 Em:U16153.1 Em:U28368.1 FT Em:X75018.1 Em:Y07958.1" FT CDS join(19837986..19838426,19838815..19838859) FT /gene="ID4" FT /locus_tag="RP4-625H18.3-001" FT /standard_name="OTTHUMP00000016081" FT /product="inhibitor of DNA binding 4, dominant negative FT helix-loop-helix protein" FT /protein_id="CAA18779.1" FT /translation="MKAVSPVRPSGRKAPSGCGGGELALRCLAEHGHSLGGSAAAAAAA FT AAARCKAAEAAADEPALCLQCDMNDCYSRLRRLVPTIPPNKKVSKVEILQHVIDYILDL FT QLALETHPALLRQPPPPAPPHHPAGTCPAAPPRTPLTALNTDPAGAVNKQGDSILCR" FT mRNA complement(join(<19803838..19804141,19804906..19804973)) FT /locus_tag="RP4-625H18.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA810378 Em:AW976002 Em:BF883889" FT mRNA complement(join(<19803602..19804141,19804402..19804877)) FT /locus_tag="RP4-625H18.2-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA812921 Em:AA860387 Em:AI082421 FT Em:AW573114 Em:BE168311" FT misc_feature complement(19938542..19938546) FT /note="Tandem repeat. Forced join. gap estimated to be FT 500bp according to restriction digest" FT misc_feature complement(19968703..20120679) FT /note="annotated region of clone" FT CDS complement(20042686..20043171) FT /pseudo FT /locus_tag="RP1-130G2.1-001" FT /product="ribosomal protein L29 (RPL29) pseudogene" FT /note="match: proteins: Sw:P05747 Sw:P25886 Sw:P47914 FT Sw:P47915 Sw:Q24154 Sw:Q84WM0 Sw:Q92366 Sw:Q95281 Sw:Q95281 FT Sw:Q9M7X7 Tr:O45226 Tr:P47915 Tr:Q5M8M8 Tr:Q5M8M8 Tr:Q8SXW1 FT Tr:Q90YT8 Tr:Q95V37 Tr:Q9FP55 Tr:Q9FR31 Tr:Q9MAW5 FT Tr:Q9XST9" FT CDS complement(join(20102517..20102643,20109829..20109980, FT 20113107..20113239,20115519..20115583,20118668..20118771, FT AL355139.10:4060..4252,AL355139.10:6169..6352, FT AL355139.10:8351..8405,AL355139.10:10796..10851, FT AL158198.14:12010..12105,AL158198.14:18975..19052, FT AL158198.14:20414..20559,AL158198.14:79926..80024)) FT /locus_tag="RP1-130G2.2-001" FT /standard_name="OTTHUMP00000016082" FT /product="novel protein" FT /note="match: proteins: Sw:Q08548 Sw:Q08548 Sw:Q6P1A2 FT Sw:Q6P1A2 Sw:Q91V01 Sw:Q91V01 Tr:O42916 Tr:Q17826 Tr:Q18856 FT Tr:Q8T8Q2 Tr:Q96KY4 Tr:Q9CZ73 Tr:Q9V5F2" FT /protein_id="CAI19512.1" FT /translation="MAAEPQPSSLSYRTTGSTYLHPLSELLGIPLDQVNFVVCQLVALF FT AAFWFRIYLRPGTTSSDVRHAVATIFGIYFVIFCFGWYSVHLFVLVLMCYAIMVTASVS FT NIHRYSFFVAMGYLTICHISRIYIFHYGILTTDFSGPLMIVTQKITTLAFQVHDGLGRR FT AEDLSAEQHRLAIKVKPSFLEYLSYLLNFMSVIAGPCNNFKDYIAFIEGKHIHMKLLEV FT NWKRKGFHSLPEPSPTGAVIHKLGITLVSLLLFLTLTKTFPVTCLVDDWFVHKASFPAR FT LCYLYVVMQASKPKYYFAWTLADAVNNAAGFGFSGVDKNGNFCWDLLSNLNIWKIETAT FT SFKMYLENWNIQTATWLKCVCYQRVPWYPTVLTFILSALWHGVYPGYYFTFLTGILVTL FT AARAVRNNYRHYFLSSRALKAVYDAGTWAVTQLAVSYTVAPFVMLAVEPTISLYKSMYF FT YLHIISLLIILFLPMKPQAHTQRRPQTLNSINKRKTD" FT mRNA complement(join(20102376..20102643,20109829..20109980, FT 20113107..20113239,20115519..20115583,20118668..20118771, FT AL355139.10:4060..4252,AL355139.10:6169..6352, FT AL355139.10:8351..8405,AL355139.10:10796..10851, FT AL158198.14:12010..12105,AL158198.14:18975..19052, FT AL158198.14:20414..20559,AL158198.14:79926..80189)) FT /locus_tag="RP1-130G2.2-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AK012931.1 Em:AK027321.1 FT Em:BC016005.1" FT /note="match: ESTs: Em:AA078851 Em:AW356698 Em:AW882984 FT Em:BB634226 Em:BE285339 Em:BE285791 Em:BF015897 Em:BF040365 FT Em:BF225142 Em:BF579873 Em:BF812851 Em:BF851495 Em:BI401521 FT Em:BI600326 Em:BI653979 Em:BI685283 Em:BI692170" FT misc_feature 20120680..20132540 FT /note="annotated region of clone" FT misc_feature 20132341 FT /note="Clone_left_end: RP11-239H6" FT CDS join(complement(AL158198.14:79926..80024), FT complement(AL158198.14:20414..20559), FT complement(AL158198.14:18975..19052), FT complement(AL158198.14:12010..12105), FT complement(20131375..20131430), FT complement(20128930..20128984), FT complement(20126748..20126931), FT complement(20124639..20124831),AL008627.1:1909..2012, FT AL008627.1:5097..5161,AL008627.1:7441..7573, FT AL008627.1:10700..10851,AL008627.1:18037..18163) FT /locus_tag="RP1-130G2.2-001" FT /standard_name="OTTHUMP00000016082" FT /product="novel protein" FT /note="match: proteins: Sw:Q08548 Sw:Q08548 Sw:Q6P1A2 FT Sw:Q6P1A2 Sw:Q91V01 Sw:Q91V01 Tr:O42916 Tr:Q17826 Tr:Q18856 FT Tr:Q8T8Q2 Tr:Q96KY4 Tr:Q9CZ73 Tr:Q9V5F2" FT /protein_id="CAI20913.1" FT /translation="MAAEPQPSSLSYRTTGSTYLHPLSELLGIPLDQVNFVVCQLVALF FT AAFWFRIYLRPGTTSSDVRHAVATIFGIYFVIFCFGWYSVHLFVLVLMCYAIMVTASVS FT NIHRYSFFVAMGYLTICHISRIYIFHYGILTTDFSGPLMIVTQKITTLAFQVHDGLGRR FT AEDLSAEQHRLAIKVKPSFLEYLSYLLNFMSVIAGPCNNFKDYIAFIEGKHIHMKLLEV FT NWKRKGFHSLPEPSPTGAVIHKLGITLVSLLLFLTLTKTFPVTCLVDDWFVHKASFPAR FT LCYLYVVMQASKPKYYFAWTLADAVNNAAGFGFSGVDKNGNFCWDLLSNLNIWKIETAT FT SFKMYLENWNIQTATWLKCVCYQRVPWYPTVLTFILSALWHGVYPGYYFTFLTGILVTL FT AARAVRNNYRHYFLSSRALKAVYDAGTWAVTQLAVSYTVAPFVMLAVEPTISLYKSMYF FT YLHIISLLIILFLPMKPQAHTQRRPQTLNSINKRKTD" FT mRNA join(complement(AL158198.14:79926..80189), FT complement(AL158198.14:20414..20559), FT complement(AL158198.14:18975..19052), FT complement(AL158198.14:12010..12105), FT complement(20131375..20131430), FT complement(20128930..20128984), FT complement(20126748..20126931), FT complement(20124639..20124831),AL008627.1:1909..2012, FT AL008627.1:5097..5161,AL008627.1:7441..7573, FT AL008627.1:10700..10851,AL008627.1:18037..18304) FT /locus_tag="RP1-130G2.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA078851 Em:AW356698 Em:AW882984 FT Em:BB634226 Em:BE285339 Em:BE285791 Em:BF015897 Em:BF040365 FT Em:BF225142 Em:BF579873 Em:BF812851 Em:BF851495 Em:BI401521 FT Em:BI600326 Em:BI653979 Em:BI685283 Em:BI692170" FT /note="match: cDNAs: Em:AK012931.1 Em:AK027321.1 FT Em:BC016005.1" FT misc_feature 20132541..20305897 FT /note="annotated region of clone" FT misc_feature 20195078 FT /note="Clone_right_end: RP3-434O11" FT mRNA join(20212318..20212408,20294607..20294706) FT /locus_tag="RP11-239H6.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW237409" FT CDS join(complement(20212367..20212465), FT complement(20152855..20153000), FT complement(20151416..20151493), FT complement(20144451..20144546), FT complement(AL355139.10:10796..10851), FT complement(AL355139.10:8351..8405), FT complement(AL355139.10:6169..6352), FT complement(AL355139.10:4060..4252),AL008627.1:1909..2012, FT AL008627.1:5097..5161,AL008627.1:7441..7573, FT AL008627.1:10700..10851,AL008627.1:18037..18163) FT /locus_tag="RP1-130G2.2-001" FT /standard_name="OTTHUMP00000016082" FT /product="novel protein" FT /note="match: proteins: Sw:Q08548 Sw:Q08548 Sw:Q6P1A2 FT Sw:Q6P1A2 Sw:Q91V01 Sw:Q91V01 Tr:O42916 Tr:Q17826 Tr:Q18856 FT Tr:Q8T8Q2 Tr:Q96KY4 Tr:Q9CZ73 Tr:Q9V5F2" FT /protein_id="CAH71585.1" FT /translation="MAAEPQPSSLSYRTTGSTYLHPLSELLGIPLDQVNFVVCQLVALF FT AAFWFRIYLRPGTTSSDVRHAVATIFGIYFVIFCFGWYSVHLFVLVLMCYAIMVTASVS FT NIHRYSFFVAMGYLTICHISRIYIFHYGILTTDFSGPLMIVTQKITTLAFQVHDGLGRR FT AEDLSAEQHRLAIKVKPSFLEYLSYLLNFMSVIAGPCNNFKDYIAFIEGKHIHMKLLEV FT NWKRKGFHSLPEPSPTGAVIHKLGITLVSLLLFLTLTKTFPVTCLVDDWFVHKASFPAR FT LCYLYVVMQASKPKYYFAWTLADAVNNAAGFGFSGVDKNGNFCWDLLSNLNIWKIETAT FT SFKMYLENWNIQTATWLKCVCYQRVPWYPTVLTFILSALWHGVYPGYYFTFLTGILVTL FT AARAVRNNYRHYFLSSRALKAVYDAGTWAVTQLAVSYTVAPFVMLAVEPTISLYKSMYF FT YLHIISLLIILFLPMKPQAHTQRRPQTLNSINKRKTD" FT mRNA join(complement(20212367..20212630), FT complement(20152855..20153000), FT complement(20151416..20151493), FT complement(20144451..20144546), FT complement(AL355139.10:10796..10851), FT complement(AL355139.10:8351..8405), FT complement(AL355139.10:6169..6352), FT complement(AL355139.10:4060..4252),AL008627.1:1909..2012, FT AL008627.1:5097..5161,AL008627.1:7441..7573, FT AL008627.1:10700..10851,AL008627.1:18037..18304) FT /locus_tag="RP1-130G2.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA078851 Em:AW356698 Em:AW882984 FT Em:BB634226 Em:BE285339 Em:BE285791 Em:BF015897 Em:BF040365 FT Em:BF225142 Em:BF579873 Em:BF812851 Em:BF851495 Em:BI401521 FT Em:BI600326 Em:BI653979 Em:BI685283 Em:BI692170" FT /note="match: cDNAs: Em:AK012931.1 Em:AK027321.1 FT Em:BC016005.1" FT CDS join(20252286..20252425,20252747..20252968, FT 20253280..20253433) FT /pseudo FT /locus_tag="RP11-239H6.3-001" FT /product="pseudogene similar to tropomysin" FT misc_feature 20305699 FT /note="Clone_left_end: RP1-46C2" FT misc_feature 20305898..20415699 FT /note="annotated region of clone" FT misc_feature 20327531 FT /note="Clone_right_end: RP11-239H6" FT misc_feature 20349412..20349444 FT /note="Single clone region. Assembly confirm by restriction FT enzyme digest data" FT misc_feature 20359348..20359392 FT /note="Single clone region. Alu region. pUC subcloned to FT give average 11x coverage. Assembly confirmed by FT restriction enzyme digest data" FT misc_feature 20388307..20388364 FT /note="Single clone region. Sequence from clone PCR only. FT Assembly confirmed by restriction enzyme digest data" FT misc_feature 20401601 FT /note="Clone_left_end: RP1-177P22" FT mRNA join(20402398..20402856,AL136303.15:64478..64589, FT AL136303.15:65838..66057,AL136303.15:67394..67552, FT AL136303.15:71321..71435,AL136303.15:72745..72880, FT AL136303.15:74800..78342) FT /gene="E2F3" FT /locus_tag="RP1-177P22.2-001" FT /product="E2F transcription factor 3" FT /note="match: ESTs: Em:AA117446 Em:AA868171 Em:AI017221 FT Em:AI020268 Em:AI325813 Em:AI555342 Em:AI700195 Em:AI892508 FT Em:AV750998 Em:AW702018 Em:BE573863 Em:BF546837 Em:BF918937 FT Em:BI219791 Em:BI254739 Em:BI660849 Em:BI730799" FT /note="match: cDNAs: Em:AF015948.1 Em:AF078111.1 FT Em:D38550.1 Em:L22846.1 Em:Y10479.1" FT CDS join(20402464..20402856,AL136303.15:64478..64589, FT AL136303.15:65838..66057,AL136303.15:67394..67552, FT AL136303.15:71321..71435,AL136303.15:72745..72880, FT AL136303.15:74800..75062) FT /gene="E2F3" FT /locus_tag="RP1-177P22.2-001" FT /standard_name="OTTHUMP00000018012" FT /product="E2F transcription factor 3" FT /note="match: proteins: Sw:O00716 Sw:O35261 Sw:O54917 FT Sw:O75461 Sw:P56931 Sw:P81294 Sw:Q01094 Sw:Q14209 Sw:Q16254 FT Sw:Q27368 Sw:Q61501 Sw:Q61502 Sw:Q62523 Sw:Q90977" FT /protein_id="CAI21471.1" FT /translation="MRKGIQPALEQYLVTAGGGEGAAVVAAAAAASMDKRALLASPGFA FT AAAAAAAAPGAYIQILTTNTSTTSCSSSLQSGAVAAGPLLPSAPGAEQTAGSLLYTTPH FT GPSSRAGLLQQPPALGRGGSGGGGGPPAKRRLELGESGHQYLSDGLKTPKGKGRAALRS FT PDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDIT FT NVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCT FT LDLKLLTEDSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVPDSIESLQIHLA FT STQGPIEVYLCPEETETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSP FT LASPANLLQQTEDQIPSNLEGPFVNLLPPLLQEDYLLSLGEEEGISDLFDAYDLEKLPL FT VEDFMCS" FT misc_feature 20415599 FT /note="Clone_right_end: RP1-46C2" FT misc_feature 20415700..20522914 FT /note="annotated region of clone" FT mRNA join(20438052..20438229,20440188..20440409) FT /locus_tag="RP1-177P22.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI027665" FT polyA_site 20440409 FT misc_feature 20461623..20461650 FT /note="Single clone region. Sequence derived by PAC PCR FT only. Assembly confirmed by restriction enzyme digest data" FT polyA_signal 20493896..20493901 FT polyA_signal 20493921..20493926 FT polyA_site 20493940 FT polyA_site 20493941 FT polyA_site 20493942 FT polyA_site 20493946 FT mRNA join(AL132775.29:96601..97059,20480077..20480188, FT 20481437..20481656,20482993..20483151,20486920..20487034, FT 20488344..20488479,20490399..20493941) FT /gene="E2F3" FT /locus_tag="RP1-177P22.2-001" FT /product="E2F transcription factor 3" FT /note="match: ESTs: Em:AA117446 Em:AA868171 Em:AI017221 FT Em:AI020268 Em:AI325813 Em:AI555342 Em:AI700195 Em:AI892508 FT Em:AV750998 Em:AW702018 Em:BE573863 Em:BF546837 Em:BF918937 FT Em:BI219791 Em:BI254739 Em:BI660849 Em:BI730799" FT /note="match: cDNAs: Em:AF015948.1 Em:AF078111.1 FT Em:D38550.1 Em:L22846.1 Em:Y10479.1" FT CDS join(AL132775.29:96667..97059,20480077..20480188, FT 20481437..20481656,20482993..20483151,20486920..20487034, FT 20488344..20488479,20490399..20490661) FT /gene="E2F3" FT /locus_tag="RP1-177P22.2-001" FT /standard_name="OTTHUMP00000018012" FT /product="E2F transcription factor 3" FT /note="match: proteins: Sw:O00716 Sw:O35261 Sw:O54917 FT Sw:O75461 Sw:P56931 Sw:P81294 Sw:Q01094 Sw:Q14209 Sw:Q16254 FT Sw:Q27368 Sw:Q61501 Sw:Q61502 Sw:Q62523 Sw:Q90977" FT /protein_id="CAC28598.2" FT /translation="MRKGIQPALEQYLVTAGGGEGAAVVAAAAAASMDKRALLASPGFA FT AAAAAAAAPGAYIQILTTNTSTTSCSSSLQSGAVAAGPLLPSAPGAEQTAGSLLYTTPH FT GPSSRAGLLQQPPALGRGGSGGGGGPPAKRRLELGESGHQYLSDGLKTPKGKGRAALRS FT PDSPKTPKSPSEKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDIT FT NVLEGIHLIKKKSKNNVQWMGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCT FT LDLKLLTEDSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVPDSIESLQIHLA FT STQGPIEVYLCPEETETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSP FT LASPANLLQQTEDQIPSNLEGPFVNLLPPLLQEDYLLSLGEEEGISDLFDAYDLEKLPL FT VEDFMCS" FT misc_feature 20522715 FT /note="Clone_left_end: RP3-444C7" FT misc_feature complement(20522915..20651084) FT /note="annotated region of clone" FT misc_feature complement(20606531..20606551) FT /note="ET and BigDye primers only" FT CDS join(20546582..20546754,20548824..20548936, FT 20649524..20649608,complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..24435) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAI21023.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(20546572..20546754,20548824..20548936, FT 20649524..20649608,complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..25800) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT misc_feature complement(20525401) FT /note="Clone_right_end: RP3-348I23" FT misc_feature complement(20522915) FT /note="Clone_left_end: RP3-444C7" FT misc_feature complement(20651085..20757284) FT /note="annotated region of clone" FT CDS complement(join(20722559..20722800,20723797..20723886)) FT /pseudo FT /locus_tag="RP3-348I23.3-001" FT /product="ribosomal protein L36A (RPL36A) pseudogene" FT /note="match: proteins: Sw:P61487 Sw:P83881 Sw:P83882 FT Sw:P83882 Sw:P83882 Sw:P83882 Sw:P83882 Sw:Q969Q0" FT mRNA complement(join(20756334..20756432,20756883..20756999, FT AL513188.13:15783..16005,AL513188.13:42692..42765, FT AL513188.13:43541..43641)) FT /locus_tag="RP3-348I23.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL042792" FT CDS join(complement(AL033521.2:104331..104503), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561),20739750..20739846, FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..24435) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAI20280.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(complement(AL033521.2:104331..104513), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561),20739750..20739846, FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..25800) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT misc_feature 20757285..20845147 FT /note="annotated region of clone" FT misc_feature 20759284 FT /note="Clone_right_end: RP3-348I23" FT mRNA join(complement(20800825..20800925), FT complement(20799976..20800049), FT complement(20773067..20773289),AL035090.10:2287..2403, FT AL035090.10:2854..2952) FT /locus_tag="RP3-348I23.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL042792" FT misc_feature 20843148 FT /note="Clone_left_end: RP11-424H23" FT CDS join(complement(AL033521.2:104331..104503), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536),20758826..20758874, FT 20781376..20781496,AL513549.13:3159..3262, FT AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..24435) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAH72467.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(complement(AL033521.2:104331..104513), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536),20758826..20758874, FT 20781376..20781496,AL513549.13:3159..3262, FT AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..25800) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT misc_feature 20845148..20974521 FT /note="annotated region of clone" FT misc_feature 20925851 FT /note="Clone_right_end: RP11-322M21" FT CDS join(complement(AL033521.2:104331..104503), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT 20846306..20846409,20955650..20955816, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..24435) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAH73706.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(complement(AL033521.2:104331..104513), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT 20846306..20846409,20955650..20955816, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..25800) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT misc_feature 20970522 FT /note="Clone_left_end: RP1-201D7" FT misc_feature complement(20974522..21073255) FT /note="annotated region of clone" FT misc_feature complement(20974522) FT /note="Clone_left_end: RP1-201D7" FT CDS join(complement(AL033521.2:104331..104503), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT 21000458..21000603,21065279..21065459, FT AL513015.6:26225..26287,AL512405.13:2717..2800, FT AL512405.13:5806..5970,AL451080.11:24244..24435) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAI19768.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(complement(AL033521.2:104331..104513), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT 21000458..21000603,21065279..21065459, FT AL513015.6:26225..26287,AL512405.13:2717..2800, FT AL512405.13:5806..5970,AL451080.11:24244..25800) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT misc_feature 21073256..21082507 FT /note="annotated region of clone" FT misc_feature 21082308 FT /note="Clone_left_end: RP1-52M20" FT misc_feature 21082508..21195635 FT /note="annotated region of clone" FT misc_feature 21124732..21124798 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT misc_feature 21134305 FT /note="Clone_left_end: RP11-370N21" FT misc_feature 21140231 FT /note="Clone_right_end: RP11-138I6" FT misc_feature 21144354..21144387 FT /note="Sequence from overlapping clone bA370N21 (AL512405). FT Assembly confirmed by restriction digest" FT CDS join(complement(AL033521.2:104331..104503), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),21108632..21108694, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..24435) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAI21687.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(complement(AL033521.2:104331..104513), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),21108632..21108694, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT AL451080.11:24244..25800) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT misc_feature 21195535 FT /note="Clone_right_end: RP1-52M20" FT misc_feature 21195636..21206935 FT /note="annotated region of clone" FT mRNA join(21201043..21201123,21201341..21201505, FT AL451080.11:24244..24837) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-002" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: ESTs: Em:AL518999 Em:AL522222" FT misc_feature 21206736 FT /note="Clone_left_end: RP11-323B13" FT CDS join(complement(AL033521.2:104331..104503), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT 21198252..21198335,21201341..21201505, FT AL451080.11:24244..24435) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAH73074.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(complement(AL033521.2:104331..104513), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT 21198252..21198335,21201341..21201505, FT AL451080.11:24244..25800) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT misc_feature 21206936..21263560 FT /note="annotated region of clone" FT mRNA join(AL512405.13:5508..5588,AL512405.13:5806..5970, FT 21231079..21231672) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-002" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: ESTs: Em:AL518999 Em:AL522222" FT polyA_signal 21232608..21232613 FT polyA_site 21232635 FT misc_feature 21263361 FT /note="Clone_left_end: RP1-216A11" FT CDS join(complement(AL033521.2:104331..104503), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT 21231079..21231270) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /standard_name="OTTHUMP00000016083" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: proteins: Tr:Q91WE6 Tr:Q9NXB3" FT /protein_id="CAH72474.1" FT /translation="MPSASCDTLLDDIEDIVSQEDSKPQDRHFVRKDVVPKVRRRNTQK FT YLQEEENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLW FT LLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRV FT VEVVEETIKGHSVRLLGQKKDNGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCK FT TKHARGNLASYPIDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEV FT IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVA FT DFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG FT TPAAKMEQVPAQVKKQRTKDLSRVFHSYSPYDHKIGERQQVLVTEESFDSKFYVAHNQF FT YEQVLVPKNPAFMGKMVEVDIYESGKHFMKGQPVSDAKVYTPSISKPLAKGEVSGLTKD FT FRNGLGNQLSSGSHTSAASQCDSASSRMVLPMPRLHQDCALRMSVGLALLGLLFAFFVK FT VYN" FT mRNA join(complement(AL033521.2:104331..104513), FT complement(AL033521.2:102149..102261), FT complement(AL033521.2:1477..1561), FT complement(AL035090.10:19440..19536), FT AL513188.13:1542..1590,AL513188.13:24092..24212, FT AL513549.13:3159..3262,AL513549.13:112503..112669, FT complement(AL022717.2:72653..72798), FT complement(AL022717.2:7797..7977),AL513015.6:26225..26287, FT AL512405.13:2717..2800,AL512405.13:5806..5970, FT 21231079..21232635) FT /gene="CDKAL1" FT /locus_tag="RP11-323B13.1-001" FT /product="CDK5 regulatory subunit associated protein 1-like FT 1" FT /note="match: ESTs: Em:AA249846 Em:AA807743 Em:AI637916 FT Em:AI929294 Em:AI929369 Em:AL518998 Em:AL518999 Em:AL522221 FT Em:AL597272 Em:AU121494 Em:AU147293 Em:AW245458 Em:AW245994 FT Em:AW248014 Em:AW248084 Em:BB476090 Em:BB638590 Em:BB643935 FT Em:BB651261 Em:BB658977 Em:BB712308 Em:BE464922 Em:BE791355 FT Em:BE797743 Em:BE799258 Em:BE872438 Em:BF088329 Em:BF155528 FT Em:BF471258 Em:BF525015 Em:BF811755 Em:BF818489 Em:BG183932 FT Em:BG194374 Em:BG199922 Em:BG218252 Em:BG289679 Em:BG342727 FT Em:BG342810 Em:BG389908 Em:BG778933 Em:BI562312 Em:BI911122 FT Em:BM666014 Em:W27542 Em:W73041 Em:W73306" FT /note="match: cDNAs: Em:AK000349 Em:AK000349.1 FT Em:AK006916.1 Em:AK018346 Em:AK018346.1 Em:AK024151.1 FT Em:BC016073.1" FT misc_feature 21316255 FT /note="Clone_left_end: RP1-135L22" FT misc_feature 21316455..21435561 FT /note="annotated region of clone" FT mRNA join(21354642..21354826,21355326..21355527) FT /locus_tag="RP1-135L22.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW293732" FT misc_feature 21435562..21586533 FT /note="annotated region of clone" FT misc_feature 21435732..21435822 FT /note="Sequence from overlapping clone RP11-38C16 FT (AL035604). Assembly confirmed by restriction digest data" FT misc_feature 21437561 FT /note="Clone_right_end: RP1-135L22" FT misc_feature 21448876..21449043 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT misc_feature 21449008 FT /note="Tandem repeat. Forced join. Assembly confirmed by FT restriction digest data" FT misc_feature 21456696 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 500bp by restriction digest data" FT polyA_site complement(21522707) FT polyA_signal complement(21522708..21522713) FT polyA_signal complement(21522726..21522731) FT mRNA complement(join(21522707..21523071,21523826..21524003)) FT /locus_tag="RP11-204E9.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF399383 Em:BF401523 Em:BF403095 FT Em:BF403435 Em:BF403501" FT misc_feature 21559498..21559586 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 21560113..21560154 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 21584534 FT /note="Clone_left_end: RP3-322L4" FT misc_feature 21586534..21713261 FT /note="annotated region of clone" FT mRNA 21593000..21598850 FT /gene="SOX4" FT /locus_tag="RP3-322L4.3-001" FT /product="SRY (sex determining region Y)-box 4" FT /note="match: ESTs: Em:AA010740 Em:AA011128 Em:AA016547 FT Em:AA046955 Em:AA081800 Em:AA138331 Em:AA168996 Em:AA220602 FT Em:AA232630 Em:AA242817 Em:AA256591 Em:AA258911 Em:AA271551 FT Em:AA326782 Em:AA326783 Em:AA353693 Em:AA354642 Em:AA355446 FT Em:AA418374 Em:AA516804 Em:AA533386 Em:AA534016 Em:AA536128 FT Em:AA558331 Em:AA558712 Em:AA587216 Em:AA638064 Em:AA638084 FT Em:AA654523 Em:AA659844 Em:AA705795 Em:AA723310 Em:AA775707 FT Em:AA845133 Em:AA885164 Em:AA929033 Em:AI013050 Em:AI139260 FT Em:AI159516 Em:AI173306 Em:AI240186 Em:AI253212 Em:AI340276 FT Em:AI369820 Em:AI393389 Em:AI445640 Em:AI493485 Em:AI536934 FT Em:AI598329 Em:AI605701 Em:AI677727 Em:AI732321 Em:AI740905 FT Em:AI743591 Em:AI793074 Em:AI793249 Em:AI809956 Em:AI817673 FT Em:AI818296 Em:AI820744 Em:AI828016 Em:AI870541 Em:AI871096 FT Em:AI879676 Em:AI906947 Em:AI914128 Em:AI951648 Em:AI989477 FT Em:AL362462 Em:AU016691 Em:AV320376 Em:AV609582 Em:AV612256 FT Em:AV718222 Em:AV739095 Em:AV741872 Em:AV742385 Em:AV755392 FT Em:AV755768 Em:AV756100 Em:AV756545 Em:AV756831 Em:AV757108 FT Em:AV757300 Em:AV757690 Em:AV757939 Em:AV758321 Em:AV758569 FT Em:AV758572 Em:AV758676 Em:AV758706 Em:AV758926 Em:AW043811 FT Em:AW121679 Em:AW195908 Em:AW197100 Em:AW205984 Em:AW237017 FT Em:AW270159 Em:AW314039 Em:AW464512 Em:AW515805 Em:AW590759 FT Em:AW593350 Em:AW613987 Em:AW619709 Em:AW701748 Em:AW740749 FT Em:AW804007 Em:AW913083 Em:AW946823 Em:AW990172 Em:AW992157 FT Em:AW999306 Em:AW999848 Em:BB007738 Em:BB184833 Em:BB240379 FT Em:BB458162 Em:BB555911 Em:BB588470 Em:BB613396 Em:BB629069 FT Em:BB650672 Em:BB665542 Em:BB672670 Em:BB672716 Em:BB672898 FT Em:BB673031 Em:BB673087 Em:BB673112 Em:BB673567 Em:BB673907 FT Em:BB674174 Em:BB674238 Em:BB674576 Em:BB674855 Em:BB675589 FT Em:BB675877 Em:BB676210 Em:BB676937 Em:BB678216 Em:BB678274 FT Em:BB678550 Em:BB685365 Em:BB689029 Em:BB790345 Em:BB806258 FT Em:BE006559 Em:BE041565 Em:BE041834 Em:BE048713 Em:BE219990 FT Em:BE298430 Em:BE466360 Em:BE551058 Em:BE673646 Em:BE790499 FT Em:BE793927 Em:BE796921 Em:BE873619 Em:BE952590 Em:BE979222 FT Em:BF000122 Em:BF055263 Em:BF056257 Em:BF056267 Em:BF056289 FT Em:BF057341 Em:BF058109 Em:BF058137 Em:BF058743 Em:BF058778 FT Em:BF059345 Em:BF062312 Em:BF104009 Em:BF115254 Em:BF181120 FT Em:BF195546 Em:BF196447 Em:BF246757 Em:BF434299 Em:BF434673 FT Em:BF446038 Em:BF446097 Em:BF447664 Em:BF527138 Em:BF592122 FT Em:BF678566 Em:BF723499 Em:BF869080 Em:BF941930 Em:BG036643 FT Em:BG055433 Em:BG070656 Em:BG144725 Em:BG154212 Em:BG229355 FT Em:BG259622 Em:BG277460 Em:BG284544 Em:BG287397 Em:BG289413 FT Em:BG370537 Em:BG491418 Em:BG504856 Em:BG505989 Em:BG528420 FT Em:BG612348 Em:BG615571 Em:BG622676 Em:BG679283 Em:BG762401 FT Em:BG827829 Em:BG833797 Em:BG921711 Em:BG973560 Em:BG993752 FT Em:BI088114 Em:BI092574 Em:BI093210 Em:BI116618 Em:BI196740 FT Em:BI453526 Em:BI690641 Em:BI692701 Em:BI693955 Em:BI912751 FT Em:BI965004 Em:BI988024 Em:BI990778 Em:BM031460 Em:BM120646 FT Em:BM431202 Em:C02598 Em:D52697 Em:D53142 Em:D55192 FT Em:D55893 Em:D56205 Em:H44503 Em:H46634 Em:H82507 Em:M85677 FT Em:N23605 Em:N86625 Em:R55639 Em:R55640 Em:R73311 Em:T31802 FT Em:T53299 Em:W16493 Em:W16502 Em:W25179 Em:W56636 FT Em:W69885" FT /note="match: cDNAs: Em:AB010741.1 Em:AB011802.1 FT Em:AB011803.1 Em:AB028641.1 Em:AB033888.1 Em:AB052692.1 FT Em:AF009414.1 Em:AF070669.1 Em:AF124147.1 Em:AF186844.1 FT Em:AF226675.1 Em:AJ004858.1 Em:AJ237813.1 Em:AJ420500.1 FT Em:AY035397.1 Em:BC018551.1 Em:BC018808.1 Em:D86075.1 FT Em:D87209.1 Em:U12467.1 Em:U12534.1 Em:U23752.1 Em:U35612.1 FT Em:X70298.1 Em:X70683.1" FT CDS 21594766..21596190 FT /gene="SOX4" FT /locus_tag="RP3-322L4.3-001" FT /standard_name="OTTHUMP00000017714" FT /product="SRY (sex determining region Y)-box 4" FT /note="match: proteins: Sw:Q06945" FT /protein_id="CAC03595.1" FT /translation="MVQQTNNAENTEALLAGESSDSGAGLELGIASSPTPGSTASTGGK FT ADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSD FT KIPFIREAERLRLKHMADYPDYKYRPRKKVKSGNANSSSSAAASSKPGEKGDKVGGSGG FT GGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCGSKVAGGAGGGVSKPHAKLILAG FT GGGGGKAAAAAAASFAAEQAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAAL FT AAPGKHLAEKKVKRVYLFGGLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLS FT GRSSAASSPAAGRSPADHRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSSDD FT EFEDDLLDLNPSSNFESMSLGSFSSSSALDRDLDFNFEPGSGSHFEFPDYCTPEVSEMI FT SGDWLESSISNLVFTY" FT polyA_signal 21598822..21598827 FT polyA_site 21598850 FT CDS 21602359..21602600 FT /pseudo FT /locus_tag="RP3-322L4.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:P53082 Sw:P91375 Tr:O14280 FT Tr:Q9XVJ0" FT misc_feature 21702361 FT /note="Clone_left_end: RP4-551N11" FT misc_feature 21711261 FT /note="Clone_right_end: RP3-322L4" FT misc_feature 21750521..21751104 FT /note="Sequence from overlapping clone AL117346. Assembly FT confirmed by restriction digest data" FT misc_feature 21841213 FT /note="Clone_right_end: RP4-551N11" FT misc_feature 21849968..21850001 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 21850002 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 370bp by restriction digest data" FT misc_feature 21911092 FT /note="Clone_left_end: RP11-377N20" FT misc_feature 21915092..22037905 FT /note="annotated region of clone" FT mRNA complement(join(21980814..21980940,21981270..21981420, FT 21981614..21981701)) FT /locus_tag="RP11-377N20.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF326023" FT misc_feature 22006399 FT /note="Clone_right_end: RP11-519H8" FT misc_feature 22013583..22013614 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 22021572..22021690 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 22035806 FT /note="Clone_left_end: RP1-67M12" FT misc_feature complement(22037906..22141073) FT /note="annotated region of clone" FT mRNA join(22056775..22056919,22110976..22111157) FT /locus_tag="RP1-67M12.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA054524 Em:AA054531 Em:AA088598 FT Em:AA131967 Em:AA132039 Em:AA301354 Em:AA926713 Em:AI373121 FT Em:AV664728 Em:AW296751 Em:BF514382 Em:BF515228 FT Em:BF515357" FT /note="match: cDNAs: Em:AK022865.1" FT misc_feature complement(22037906) FT /note="Clone_left_end: RP1-67M12" FT misc_feature 22183605 FT /note="Clone_left_end: RP11-524C21" FT misc_feature 22183805..22279073 FT /note="annotated region of clone" FT CDS complement(join(22213535..22213984,22214302..22214487)) FT /pseudo FT /locus_tag="RP11-524C21.1-001" FT /product="novel protein" FT /note="match: proteins: Tr:Q9NPE2" FT misc_feature 22278874 FT /note="Clone_left_end: RP3-404K8" FT misc_feature complement(22279074..22430209) FT /note="annotated region of clone" FT mRNA complement(join(22287480..22287822,22290403..22290582, FT 22292767..22292874,22294638..22294813,22297184..22297730)) FT /gene="PRL" FT /locus_tag="RP3-404K8.1-001" FT /product="prolactin" FT /note="match: ESTs: Em:AA133920 Em:AA151622" FT /note="match: cDNAs: Em:AF022935 Em:AF054634 Em:AF067726 FT Em:D00411 Em:E02152 Em:E03022 Em:M27057 Em:M27239 Em:M27240 FT Em:M29386 Em:S66296 Em:U09018 Em:U25974 Em:U27199 Em:U75583 FT Em:V00112 Em:V00566 Em:X02892 Em:X04418 Em:X13483 Em:X14068 FT Em:X15975 Em:X54393 Em:X59785 Em:X63235 Em:X76048 Em:X76049 FT Em:X76050" FT CDS complement(join(22287631..22287822,22290403..22290582, FT 22292767..22292874,22294638..22294813,22297184..22297211)) FT /gene="PRL" FT /locus_tag="RP3-404K8.1-001" FT /standard_name="OTTHUMP00000017727" FT /product="prolactin" FT /note="match: proteins: Sw:O62781 Sw:O62819 Sw:P01236 FT Sw:P01238 Sw:P12420 Sw:P22393 Sw:P33089 Sw:P46403 Sw:P55151 FT Sw:Q28632" FT /protein_id="CAI20469.1" FT /translation="MNIKGSPWKGSLLLLLVSNLLLCQSVAPLPICPGGAARCQVTLRD FT LFDRAVVLSHYIHNLSSEMFSEFDKRYTHGRGFITKAINSCHTSSLATPEDKEQAQQMN FT QKDFLSLIVSILRSWNEPLYHLVTEVRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVS FT QVHPETKENEIYPVWSGLPSLQMADEESRLSAYYNLLHCLRRDSHKIDNYLKLLKCRII FT HNNNC" FT polyA_signal complement(22287507..22287512) FT polyA_site complement(22287480) FT misc_feature 22470416 FT /note="Clone_left_end: RP11-33I5" FT misc_feature 22556116 FT /note="Clone_left_end: RP1-309H15" FT misc_feature 22558210..22701538 FT /note="annotated region of clone" FT mRNA 22569722..22571895 FT /gene="HDGFL1" FT /locus_tag="RP1-309H15.1-001" FT /product="hepatoma derived growth factor-like 1" FT /note="match: ESTs: Em:AA382229 Em:AA382230 Em:AA382940 FT Em:AA382941 Em:AA824334 Em:AI026687 Em:AI797285 Em:AW303523 FT Em:BB616613 Em:BG719961 Em:BI460518 Em:BI460717 Em:BI465378 FT Em:BI520355 Em:BI520705 Em:BI520717 Em:BI828668 FT Em:BI830837" FT /note="match: cDNAs: Em:AK056824 Em:E08546" FT CDS 22569805..22570560 FT /gene="HDGFL1" FT /locus_tag="RP1-309H15.1-001" FT /standard_name="OTTHUMP00000017836" FT /product="hepatoma derived growth factor-like 1" FT /note="match: proteins: Sw:O75475 Sw:P51858 Sw:P51859 FT Tr:O35539 Tr:O35540" FT /protein_id="CAB75688.1" FT /translation="MSAYGMPMYKSGDLVFAKLKGYAHWPARIEHMTQPNRYQVFFFGT FT HETAFLSPKRLFPYKECKEKFGKPNKRRGFSAGLWEIENNPTVQASDCPLASEKGSGDG FT PWPEPEAAEGDEDKPTHAGGGGDELGKPDDDKPTEEEKGPLKRSAGDPPEDAPKRPKEA FT APDQEEEAEAERAAEAERAAAAAAATAVDEESPFLVAVENGSAPSEPGLVCEPPQPEEE FT ELREEEVADEEASQEWHAEAPGGGDRDSL" FT polyA_signal 22571871..22571876 FT polyA_site 22571895 FT mRNA complement(join(22589366..22589829,22592659..22592816, FT 22593943..22594062)) FT /locus_tag="RP1-309H15.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL520716" FT misc_feature 22638324 FT /note="Clone_left_end: RP3-521A22" FT misc_feature 22701438 FT /note="Clone_right_end: RP1-309H15" FT misc_feature 22722729 FT /note="Clone_right_end: RP3-521A22" FT misc_feature 22781980 FT /note="Clone_left_end: RP1-276K20" FT misc_feature 22918557 FT /note="Clone_right_end: RP3-493L23" FT misc_feature 22959449..23065408 FT /note="annotated region of clone" FT misc_feature 22959449 FT /note="Clone_left_end: RP1-209A6" FT misc_feature 23045575..23045620 FT /note="Single clone region. small insert library of pUC FT clone" FT misc_feature 23065408 FT /note="Clone_right_end: RP1-209A6" FT mRNA complement(join(<23016954..23017049,23031909..23032011, FT AL591416.4:112074..112156,AL591416.4:113734..113804)) FT /locus_tag="RP1-209A6.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL520716 Em:BM453767" FT misc_feature 23065409..23220476 FT /note="annotated region of clone" FT CDS 23102916..23103771 FT /pseudo FT /locus_tag="RP11-108N13.1-001" FT /product="ribosomal protein L6 (RPL6) pseudogene" FT /note="match: proteins: Sw:P21533 Sw:P47911 Sw:Q02878" FT misc_feature 23171030 FT /note="Clone_left_end: RP11-356B3" FT mRNA complement(join(AL035401.23:<57506..57601, FT AL035401.23:72461..72563,23175482..23175564, FT 23177142..23177212)) FT /locus_tag="RP1-209A6.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL520716 Em:BM453767" FT misc_feature 23218476 FT /note="Clone_right_end: RP11-108N13" FT misc_feature 23290635 FT /note="Clone_left_end: RP11-439H9" FT misc_feature 23294635..23391502 FT /note="annotated region of clone" FT mRNA join(23337939..23338024,23341963..23342072, FT 23345178..23345248,23346744..23346788) FT /locus_tag="RP11-439H9.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA432344" FT misc_feature 23389403 FT /note="Clone_left_end: RP11-289M23" FT misc_feature 23425861 FT /note="Clone_left_end: RP4-596H12" FT misc_feature 23601524..23689212 FT /note="annotated region of clone" FT misc_feature 23620127..23620302 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 23620303 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 800bp by restriction digest data" FT CDS <23649724..>23650002 FT /pseudo FT /locus_tag="RP4-810F7.1-001" FT /product="ferritin pseudogene" FT /note="match: proteins: Sw:P02793 Sw:P49945 Tr:Q9JKM8 FT Tr:Q9JKP6" FT misc_feature 23689112 FT /note="Clone_right_end: RP4-810F7" FT misc_feature 23693210 FT /note="Clone_left_end: RP11-440J4" FT misc_feature 23702667..23702804 FT /note="Sequence derived only from overlapping clone FT AL139093. Assembly confirmed by restriction digest" FT misc_feature 23731581 FT /note="Clone_right_end: RP11-288K24" FT misc_feature 23731682..23863575 FT /note="annotated region of clone" FT CDS complement(23856800..23857046) FT /pseudo FT /locus_tag="RP11-440J4.1-001" FT /product="serine palmitoyltransferase, long chain base FT subunit 1 (SPTLC1) pseudogene" FT /note="match: proteins: Sw:O15269 Sw:O35704 Sw:O54695 FT Sw:Q62523" FT misc_feature 23863474 FT /note="Clone_right_end: RP11-440J4" FT misc_feature 23901701 FT /note="Clone_left_end: RP1-59B16" FT misc_feature complement(23901901..24001702) FT /note="annotated region of clone" FT CDS 23972107..23973151 FT /pseudo FT /locus_tag="RP1-59B16.1-001" FT /product="exonuclease pseudogene" FT /note="match: proteins: Em:CE19046 Sw:P53331 Sw:Q08237 FT Sw:Q91560 Sw:Q96AZ6 Tr:Q02524" FT misc_feature 24001703..24130773 FT /note="annotated region of clone" FT CDS 24002052..24002654 FT /pseudo FT /locus_tag="RP11-31K13.1-001" FT /product="heterogeneous nuclear ribonucleoprotein A1 FT (HNRPA1) pseudogene" FT /note="match: proteins: Sw:P04256 Sw:P09651 Sw:P17130 FT Sw:P22626 Sw:P49312 Sw:P51968 Sw:P51989 Sw:P51990 Sw:P51991 FT Sw:Q13151 Sw:Q28521 Tr:O70592" FT misc_feature 24038847 FT /note="Clone_left_end: RP11-260H5" FT misc_feature 24054131 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 500bp from restriction digest data and FT spanning pUC clone" FT mRNA join(24126350..24126568,24128356..24128428, FT AL591343.1:3874..4071,AL591343.1:15103..16059, FT AL139388.5:101..1007) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-001" FT /product="neurensin 1" FT /note="match: ESTs: Em:AA081557.1 Em:AA084405.1 FT Em:AA926732.1 Em:AI854135.1 Em:AU051392.1 Em:AU080228.1 FT Em:AU080229.1 Em:AU080650.1 Em:AU080958.1 Em:AW336021.1 FT Em:BE702006.1 Em:BE702022.1 Em:BE702074.1 Em:BE702131.1 FT Em:BE863933.1 Em:BF315408.1 Em:BF712782.1 Em:BG700406.1 FT Em:BG702152.1 Em:BG709210.1 Em:BG715178.1 Em:BI547310.1 FT Em:BI552229.1 Em:BI596570.1 Em:BI596739.1 Em:BI669994.1 FT Em:BI820373.1 Em:BM545497.1 Em:BM545530.1 Em:BM665813.1 FT Em:BM715096.1 Em:BQ228197.1 Em:BQ268039.1 Em:BQ443297.1 FT Em:BQ597482.1 Em:F10481.1 Em:F12079.1 Em:F12878.1 FT Em:H06330.1 Em:H44905.1 Em:R38624.1 Em:T65242.1 FT Em:T75175.1" FT /note="match: cDNAs: Em:AF418980.1 Em:AK096290.1 FT Em:G43098.1" FT mRNA join(24126439..24126568,24128356..24128428, FT 24129533..24129925) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-005" FT /product="neurensin 1" FT /note="match: ESTs: Em:AA363698.1 Em:BG715502.1" FT mRNA join(24126459..24126568,24128356..24128428, FT 24128945..24129540) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-006" FT /product="neurensin 1" FT /note="match: ESTs: Em:BI752670.1" FT mRNA join(24126468..24126568,24128356..24128428, FT AL591343.1:3874..4071,AL591343.1:15103..15431, FT AL591343.1:15758..15873) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-004" FT /product="neurensin 1" FT /note="match: ESTs: Em:BI598562.1" FT mRNA join(24128371..24128428,AL591343.1:3874..4071, FT AL139388.5:8367..8496,AL139388.5:9648..9792) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-003" FT /product="neurensin 1" FT /note="match: ESTs: Em:N98796.1" FT misc_feature 24130673 FT /note="Clone_right_end: RP11-31K13" FT misc_feature 24130774..24146732 FT /note="annotated region of clone" FT mRNA join(24134545..24134744,24141152..24141751) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-002" FT /product="neurensin 1" FT /note="match: ESTs: Em:BE795384.1" FT CDS join(24134556..24134744,24141152..24141403) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-002" FT /standard_name="OTTHUMP00000018029" FT /product="neurensin 1" FT /protein_id="CAH71785.1" FT /translation="MSSCSNVCGSRQAQAAAEGGYQRYGVRSYLHQFYEDCTASIWEYE FT DDFQIQRSPNRWSSVFWKQELGFHTSSHSQEWNRKLQHKNCPRCCFGSLSPPGEALLCR FT HWDWPYHPKAPGCSAEPGGGPFQSIPTLLCGPKRGCFASSEL" FT CDS join(24134556..24134744,24145776..24146174) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-001" FT /standard_name="OTTHUMP00000018028" FT /product="neurensin 1" FT /note="match: proteins: Sw:Q9GZP1 Tr:P97799" FT /protein_id="CAH71786.1" FT /translation="MSSCSNVCGSRQAQAAAEGGYQRYGVRSYLHQFYEDCTASIWEYE FT DDFQIQRSPNRWSSVFWKVGLISGTVFVILGLTVLAVGFLVPPKIEAFGEADFVVVDTH FT AVQFNSALDMYKLAGAVLFCIGGTSMAGCLLMSVFVKSYSKEEKFLQQKFKERIADIKA FT HTQPVTKAPGPGETKIPVTLSRVQNVQPLLAT" FT CDS join(24134556..24134744,24145776..24146104, FT 24146431..24146446) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-004" FT /standard_name="OTTHUMP00000018030" FT /product="neurensin 1" FT /protein_id="CAH71787.1" FT /translation="MSSCSNVCGSRQAQAAAEGGYQRYGVRSYLHQFYEDCTASIWEYE FT DDFQIQRSPNRWSSVFWKVGLISGTVFVILGLTVLAVGFLVPPKIEAFGEADFVVVDTH FT AVQFNSALDMYKLAGAVLFCIGGTSMAGCLLMSVFVKSYSKEEKFLQQKFKERIADIKA FT HTQPVTKAPGTPLS" FT misc_feature 24146533 FT /note="Clone_left_end: RP11-176J5" FT mRNA join(AL445196.7:124748..124966,AL445196.7:126754..126826, FT 24134547..24134744,24145776..24146732,AL139388.5:101..1007) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-001" FT /product="neurensin 1" FT /note="match: ESTs: Em:AA081557.1 Em:AA084405.1 FT Em:AA926732.1 Em:AI854135.1 Em:AU051392.1 Em:AU080228.1 FT Em:AU080229.1 Em:AU080650.1 Em:AU080958.1 Em:AW336021.1 FT Em:BE702006.1 Em:BE702022.1 Em:BE702074.1 Em:BE702131.1 FT Em:BE863933.1 Em:BF315408.1 Em:BF712782.1 Em:BG700406.1 FT Em:BG702152.1 Em:BG709210.1 Em:BG715178.1 Em:BI547310.1 FT Em:BI552229.1 Em:BI596570.1 Em:BI596739.1 Em:BI669994.1 FT Em:BI820373.1 Em:BM545497.1 Em:BM545530.1 Em:BM665813.1 FT Em:BM715096.1 Em:BQ228197.1 Em:BQ268039.1 Em:BQ443297.1 FT Em:BQ597482.1 Em:F10481.1 Em:F12079.1 Em:F12878.1 FT Em:H06330.1 Em:H44905.1 Em:R38624.1 Em:T65242.1 FT Em:T75175.1" FT /note="match: cDNAs: Em:AF418980.1 Em:AK096290.1 FT Em:G43098.1" FT mRNA join(AL445196.7:124866..124966,AL445196.7:126754..126826, FT 24134547..24134744,24145776..24146104,24146431..24146546) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-004" FT /product="neurensin 1" FT /note="match: ESTs: Em:BI598562.1" FT mRNA join(AL445196.7:126769..126826,24134547..24134744, FT AL139388.5:8367..8496,AL139388.5:9648..9792) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-003" FT /product="neurensin 1" FT /note="match: ESTs: Em:N98796.1" FT misc_feature 24146733..24159722 FT /note="annotated region of clone" FT polyA_signal 24147610..24147615 FT polyA_site 24147633 FT polyA_site 24147639 FT misc_feature 24159622 FT /note="bA176J5 is deleted at this point" FT mRNA join(AL445196.7:124748..124966,AL445196.7:126754..126826, FT AL591343.1:3874..4071,AL591343.1:15103..16059, FT 24146733..24147639) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-001" FT /product="neurensin 1" FT /note="match: ESTs: Em:AA081557.1 Em:AA084405.1 FT Em:AA926732.1 Em:AI854135.1 Em:AU051392.1 Em:AU080228.1 FT Em:AU080229.1 Em:AU080650.1 Em:AU080958.1 Em:AW336021.1 FT Em:BE702006.1 Em:BE702022.1 Em:BE702074.1 Em:BE702131.1 FT Em:BE863933.1 Em:BF315408.1 Em:BF712782.1 Em:BG700406.1 FT Em:BG702152.1 Em:BG709210.1 Em:BG715178.1 Em:BI547310.1 FT Em:BI552229.1 Em:BI596570.1 Em:BI596739.1 Em:BI669994.1 FT Em:BI820373.1 Em:BM545497.1 Em:BM545530.1 Em:BM665813.1 FT Em:BM715096.1 Em:BQ228197.1 Em:BQ268039.1 Em:BQ443297.1 FT Em:BQ597482.1 Em:F10481.1 Em:F12079.1 Em:F12878.1 FT Em:H06330.1 Em:H44905.1 Em:R38624.1 Em:T65242.1 FT Em:T75175.1" FT /note="match: cDNAs: Em:AF418980.1 Em:AK096290.1 FT Em:G43098.1" FT mRNA join(AL445196.7:126769..126826,AL591343.1:3874..4071, FT 24154999..24155128,24156280..24156424) FT /gene="NRSN1" FT /locus_tag="RP11-176J5.1-003" FT /product="neurensin 1" FT /note="match: ESTs: Em:N98796.1" FT misc_feature 24159723..24223298 FT /note="annotated region of clone" FT misc_feature 24170239 FT /note="Clone_left_end: RP11-40E20" FT polyA_site complement(24171983) FT polyA_signal complement(24172003..24172008) FT polyA_site complement(24173732) FT polyA_signal complement(24173752..24173758) FT polyA_site complement(24174523) FT polyA_signal complement(24174534..24174539) FT mRNA complement(join(24171984..24175062,24178558..24178860, FT 24205230..24205531)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-002" FT /product="doublecortin domain containing 2" FT /note="match: ESTs: Em:AA127741 Em:AA127805 Em:AA342691 FT Em:AI219704 Em:AI766982 Em:AL532219 Em:AL564319 Em:AW150317 FT Em:AW444617 Em:AW965006 Em:BF109922 Em:BF112141 Em:BI760196 FT Em:BI761691 Em:BM468677" FT /note="match: cDNAs: Em:AL133043.1" FT CDS complement(join(24174958..24175062,24178558..24178860, FT 24205230..24205511)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-002" FT /standard_name="OTTHUMP00000017888" FT /product="doublecortin domain containing 2" FT /note="match: proteins: Sw:Q9UHG0 Sw:Q9UHG0" FT /protein_id="CAH71788.1" FT /translation="MKMWNNWGWCGGRRRGCTKILSTKKGIQMSIKNKHLIVIPAFSHT FT MSQLDFDFHCVFVSIDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEE FT DGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQARPARVNGGTDE FT ENGEELQQVNNELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKITSPEENENNQQN FT KDYAAVA" FT mRNA complement(join(24171984..24175062,24178558..24178860, FT 24205230..24205330,AL359389.15:56979..57141, FT AL359389.15:67782..67836,AL359389.15:69862..70008, FT AL359389.15:80645..80776,AL359389.15:80898..80974, FT AL359713.25:50088..50142,AL359713.25:53977..54571)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-001" FT /product="doublecortin domain containing 2" FT /note="match: ESTs: Em:AA004587 Em:AA004717 Em:AI889161 FT Em:AL564319 Em:AV750645 Em:BF593580 Em:BF876266 Em:BI760196 FT Em:BM468677" FT /note="match: cDNAs: Em:AF181721.1 Em:AK027036.1 FT Em:BC014954.1" FT CDS complement(join(24174958..24175062,24178558..24178860, FT 24205230..24205330,AL359389.15:56979..57141, FT AL359389.15:67782..67836,AL359389.15:69862..70008, FT AL359389.15:80645..80776,AL359389.15:80898..80974, FT AL359713.25:50088..50142,AL359713.25:53977..54269)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-001" FT /standard_name="OTTHUMP00000017887" FT /product="doublecortin domain containing 2" FT /note="match: proteins: Sw:Q9UHG0 Tr:Q9UHG1" FT /protein_id="CAH71789.1" FT /translation="MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFE FT VFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGE FT IKKRPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTL FT NQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSE FT LLFDKSTMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKE FT DVNSEKLTKLKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVD FT QRPAEIVDEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQA FT RPARVNGGTDEENGEELQQVNNELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKIT FT SPEENENNQQNKDYAAVA" FT misc_feature 24223198 FT /note="Clone_right_end: RP11-260H5" FT misc_feature 24223299..24305709 FT /note="annotated region of clone" FT misc_feature 24236371 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 50bp by restriction digest data" FT misc_feature 24275041..24275068 FT /note="Sequence from overlapping clone RP11-176J5 FT (AL139388). Assembly confirmed by restriction digest" FT misc_feature 24275111..24275298 FT /note="Sequence from overlapping clone RP11-176J5 FT (AL139388). Assembly confirmed by restriction digest" FT mRNA complement(join(AL591344.1:12362..15440, FT AL591344.1:18936..19238,AL591344.1:45608..45708, FT 24278277..24278439,24289080..24289134,24291160..24291306, FT 24301943..24302074,24302196..24302272, FT AL359713.25:50088..50142,AL359713.25:53977..54571)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-001" FT /product="doublecortin domain containing 2" FT /note="match: ESTs: Em:AA004587 Em:AA004717 Em:AI889161 FT Em:AL564319 Em:AV750645 Em:BF593580 Em:BF876266 Em:BI760196 FT Em:BM468677" FT /note="match: cDNAs: Em:AF181721.1 Em:AK027036.1 FT Em:BC014954.1" FT CDS complement(join(AL591344.1:15336..15440, FT AL591344.1:18936..19238,AL591344.1:45608..45708, FT 24278277..24278439,24289080..24289134,24291160..24291306, FT 24301943..24302074,24302196..24302272, FT AL359713.25:50088..50142,AL359713.25:53977..54269)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-001" FT /standard_name="OTTHUMP00000017887" FT /product="doublecortin domain containing 2" FT /note="match: proteins: Sw:Q9UHG0 Tr:Q9UHG1" FT /protein_id="CAH73546.1" FT /translation="MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFE FT VFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGE FT IKKRPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTL FT NQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSE FT LLFDKSTMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKE FT DVNSEKLTKLKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVD FT QRPAEIVDEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQA FT RPARVNGGTDEENGEELQQVNNELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKIT FT SPEENENNQQNKDYAAVA" FT misc_feature 24298952..24298994 FT /note="Sequence from overlapping clone RP11-176J5 FT (AL139388). Assembly confirmed by restriction digest" FT misc_feature 24300581..24300611 FT /note="Sequence from overlapping clone RP11-176J5 FT (AL139388). Assembly confirmed by restriction digest" FT misc_feature 24301710 FT /note="Clone_left_end: RP11-95P3" FT misc_feature 24305710..24456675 FT /note="annotated region of clone" FT misc_feature 24319409 FT /note="Clone_right_end: RP11-40E20" FT mRNA complement(join(24428405..24429346,24433415..24433465, FT 24433591..24433617,24436804..24436964,24437341..24437517, FT 24445774..24445867,24445954..24446059,24447066..24447207, FT 24448105..24448261,24448362..24448436,24450017..24450127, FT 24454243..24454429,AL031230.1:151..290, FT AL031230.1:3932..4052,AL031230.1:6383..6448, FT AL031230.1:10333..10472,AL031230.1:10565..10592, FT AL031230.1:10820..10927,AL031230.1:16235..16289, FT AL031230.1:17272..17320,AL031230.1:18774..18884, FT AL031230.1:19834..19931,AL031230.1:23534..23612, FT AL031230.1:29728..29783,AL031230.1:33068..33275)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-001" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: ESTs: Em:AA001730.1 Em:AA109910.1 FT Em:AA211064.1 Em:AA214590.1 Em:AA389338.1 Em:AI048613.1 FT Em:AI097839.1 Em:AI122028.1 Em:AI224937.1 Em:AI243214.1 FT Em:AI324398.1 Em:AI324946.1 Em:AI527199.1 Em:AI658809.1 FT Em:AI670096.1 Em:AV683666.1 Em:AV683732.1 Em:AV694216.1 FT Em:AW418568.1 Em:BB579855.1 Em:BE252265.1 Em:BE252628.1 FT Em:BE259107.1 Em:BE618539.1 Em:BF110141.1 Em:BF234608.1 FT Em:BF235360.1 Em:BF236124.1 Em:BF384400.1 Em:BF550985.1 FT Em:BF660153.1 Em:BG085375.1 Em:BG182770.1 Em:BG184337.1 FT Em:BG186964.1 Em:BG192178.1 Em:BG196735.1 Em:BG198788.1 FT Em:BG199312.1 Em:BG545290.1 Em:BG709751.1 Em:BI146756.1 FT Em:BI149176.1 Em:BI219614.1 Em:BI328132.1 Em:BI554399.1 FT Em:BM458510.1 Em:N69672.1 Em:N94280.1 Em:R10588.1 FT Em:R10589.1 Em:R10590.1 Em:R86028.1 Em:T55751.1" FT /note="match: cDNAs: Em:AF050666.1 Em:AJ308108.1 FT Em:AJ308109.1 Em:AK004957.1 Em:AY007546.2 Em:AY081194.1 FT Em:BC007614.1 Em:BC019146.1 Em:L11701.1 Em:L11702.1 FT Em:M60804.1" FT CDS complement(join(24429260..24429346,24433415..24433465, FT 24433591..24433617,24436804..24436964,24437341..24437517, FT 24445774..24445867,24445954..24446059,24447066..24447207, FT 24448105..24448261,24448362..24448436,24450017..24450127, FT 24454243..24454429,AL031230.1:151..290, FT AL031230.1:3932..4052,AL031230.1:6383..6448, FT AL031230.1:10333..10472,AL031230.1:10565..10592, FT AL031230.1:10820..10927,AL031230.1:16235..16289, FT AL031230.1:17272..17320,AL031230.1:18774..18884, FT AL031230.1:19834..19931,AL031230.1:23534..23612, FT AL031230.1:29728..29783,AL031230.1:33068..33164)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-001" FT /standard_name="OTTHUMP00000017721" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: proteins: Sw:O70362 Sw:P80108 Sw:P80109 FT Sw:Q15127 Tr:Q8VCU2 Tr:Q9H7R2" FT /protein_id="CAI17103.1" FT /translation="MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNG FT RVNYRELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENY FT PLPWEKDTEKLVAFLFGITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDF FT GGDVLSQFEFNFNYLARRWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEM FT LAVSKLYPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPEN FT PLFIACGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMS FT FIYKALERNIRTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLV FT VGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLD FT FNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTL FT LAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEED FT FSWFGYSLHGVTVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSW FT FTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRM FT YALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGG FT EDGRVYVYNGKETTLGDMTGKCKSWITPCPEEKAQYVLISPEASSRFGSSLITVRSKAK FT NQVVIAAGRSSLGARLSGALHVYSLGSD" FT polyA_site complement(24353459) FT polyA_signal complement(24353474..24353479) FT misc_feature 24357067..24357660 FT /note="Tandem repeat. Sequence from overlapping clone FT dJ282H10 (AL132672). Assembly confirmed by restriction FT digest" FT mRNA 24357131..24358512 FT /gene="KAAG1" FT /locus_tag="RP11-95P3.2-001" FT /product="kidney associated antigen 1" FT /note="match: cDNAs: Em:AF181722.1" FT mRNA complement(join(AL591344.1:12362..15440, FT AL591344.1:18936..19238,AL591344.1:45608..45708, FT AL359389.15:56979..57141,AL359389.15:67782..67836, FT AL359389.15:69862..70008,AL359389.15:80645..80776, FT AL359389.15:80898..80974,24353797..24353851, FT 24357686..24358280)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-001" FT /product="doublecortin domain containing 2" FT /note="match: ESTs: Em:AA004587 Em:AA004717 Em:AI889161 FT Em:AL564319 Em:AV750645 Em:BF593580 Em:BF876266 Em:BI760196 FT Em:BM468677" FT /note="match: cDNAs: Em:AF181721.1 Em:AK027036.1 FT Em:BC014954.1" FT CDS complement(join(AL591344.1:15336..15440, FT AL591344.1:18936..19238,AL591344.1:45608..45708, FT AL359389.15:56979..57141,AL359389.15:67782..67836, FT AL359389.15:69862..70008,AL359389.15:80645..80776, FT AL359389.15:80898..80974,24353797..24353851, FT 24357686..24357978)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-001" FT /standard_name="OTTHUMP00000017887" FT /product="doublecortin domain containing 2" FT /note="match: proteins: Sw:Q9UHG0 Tr:Q9UHG1" FT /protein_id="CAI17104.1" FT /translation="MSGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHEKKVSSFE FT VFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFKKLNYLDIGE FT IKKRPMEVVNTEVKPVIHSRINVSARFRKPLQEPCTIFLIANGDLINPASRLLIPRKTL FT NQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYSE FT LLFDKSTMRRPFGQKASSLPPIVGSRKSKGSGNDRHSKSTVGSSDNSSPQPLKRKGKKE FT DVNSEKLTKLKQNVKLKNSQETIPNSDEGIFKAGAERSETRGAAEVQEDEDTQVEVPVD FT QRPAEIVDEEEDGEKANKDAEQKEDFSGMNGDLEEEGGREATDAPEQVEEILDHSEQQA FT RPARVNGGTDEENGEELQQVNNELQLVLDKERKSQGAGSGQDEADVDPQRPPRPEVKIT FT SPEENENNQQNKDYAAVA" FT mRNA complement(join(24353460..24353547,24353797..24353851, FT 24357686..>24357881)) FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-003" FT /product="doublecortin domain containing 2" FT /note="match: ESTs: Em:AW293816" FT CDS complement(join(24353533..24353547,24353797..24353851, FT 24357686..>24357881)) FT /codon_start=3 FT /gene="DCDC2" FT /locus_tag="RP11-260H5__B.1-003" FT /standard_name="OTTHUMP00000017889" FT /product="doublecortin domain containing 2" FT /protein_id="CAI17105.1" FT /translation="VVIHEKKVSSFEVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLD FT QIQSGGNYVAGGQEAFKKLNYLDIGEIKKRPMEVVNTELHVL" FT CDS 24357868..24358122 FT /gene="KAAG1" FT /locus_tag="RP11-95P3.2-001" FT /standard_name="OTTHUMP00000016084" FT /product="kidney associated antigen 1" FT /note="match: proteins: Tr:Q9UBP8" FT /protein_id="CAI17106.1" FT /translation="MDDDAAPRVEGVPVAVHKHALHDGLRQVAGPGAAAAHLPRWPPPQ FT LAASRREAPPLSQRPHRTQGAGSPPETNEKLTNPQVKEK" FT polyA_signal 24358491..24358496 FT polyA_site 24358513 FT mRNA join(24403182..24403464,24405396..24405469, FT 24408636..24408652,24415276..24415391,24416625..24416741, FT 24418312..24418395,24418689..24418791) FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-008" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: ESTs: Em:AA514376 Em:AW614041 Em:AW970179 FT Em:BF223071" FT mRNA join(24403182..24403464,24405396..24405469, FT 24408636..24408672,24412450..24412623,24415261..24415391, FT 24416625..24416741,24418312..24418464,24418689..24419469) FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-010" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: ESTs: Em:BE268189" FT /note="match: cDNAs: Em:BC001028.1" FT mRNA join(24403182..24403464,24405396..24405469, FT 24408636..24408672,24409689..24409801,24412450..24412623, FT 24415261..24415391,24416625..24416741,24418312..24418464, FT 24418689..24418806,24423165..24423704) FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-011" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: ESTs: Em:AI188501 Em:AI206137 Em:AI307274 FT Em:AI624310 Em:AI628970 Em:AI631209 Em:AI954726 Em:AV714708 FT Em:AW025708 Em:AW131633 Em:AW291833 Em:AW295997 Em:AW450227 FT Em:AW979119 Em:BE219330 Em:BE798677 Em:BF033983 Em:BF116203 FT Em:BF124942 Em:BM018867" FT /note="match: cDNAs: Em:AK054587.1" FT mRNA join(24403182..24403464,24405396..24405469, FT 24408636..24408672,24409689..24409801,24412450..24412623, FT 24415261..24415391,24416625..24416741,24418312..24418464, FT 24418689..24418806,24423165..24423278,24423812..24425810) FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-009" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: ESTs: Em:AA280673 Em:AA781573 Em:AA782213 FT Em:AA890448 Em:AA933950 Em:AA994525 Em:AI027389 Em:AI342569 FT Em:AI522078 Em:AI525690 Em:AI628970 Em:AI954726 Em:AV712957 FT Em:AW131633 Em:AW295997 Em:AW632241 Em:AW974621 Em:BE168047 FT Em:BE219330 Em:BE463602 Em:BE798677 Em:BF116203 Em:BF216698 FT Em:BF218387 Em:BF245307 Em:BF245875 Em:BG421926 Em:BG740291 FT Em:BM018867" FT /note="match: cDNAs: Em:AF288288.1 Em:AF288289.1 FT Em:AF288290.1 Em:AF288291.1 Em:AF293076.1" FT CDS join(24403275..24403464,24405396..24405469, FT 24408636..24408672,24409689..24409801,24412450..24412623, FT 24415261..24415391,24416625..24416741,24418312..24418464, FT 24418689..24418806,24423165..24423284) FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-011" FT /standard_name="OTTHUMP00000016086" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: proteins: Sw:P87149 Sw:Q01926 Sw:Q02783 FT Tr:Q9LXD2 Tr:Q9LYT9 Tr:Q9S9N4 Tr:Q9SAH0 Tr:Q9ZPR4" FT /protein_id="CAI17107.1" FT /translation="MECLRSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRANL FT IGRSRAAQLCGPDRLRVAGEVHRFRTSDVSQATLASVAPVFTVTKFDKQGNVTSFERKK FT TELYQELGLQARDLRFQHVMSITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWL FT FRELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPK FT HSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEK FT SSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNL FT QLTMGTFSLSLFGLMGVAFGMNLESSLEEDHRIFWLITGIMFMGSGLIWRRLLSFLGRQ FT LEAPLPPMV" FT CDS join(24403275..24403464,24405396..24405469, FT 24408636..24408672,24409689..24409801,24412450..24412623, FT 24415261..24415391,24416625..24416741,24418312..24418464, FT 24418689..24418806,24423165..24423278,24423812..24423922) FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-009" FT /standard_name="OTTHUMP00000016085" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: proteins: Sw:P87149 Sw:Q02783 Tr:Q9LJN2 FT Tr:Q9LXD2 Tr:Q9LYT9 Tr:Q9S9N4 Tr:Q9SAH0 Tr:Q9ZPR4" FT /protein_id="CAI17108.1" FT /translation="MECLRSLPCLLPRAMRLPRRTLCALALDVTSVGPPVAACGRRANL FT IGRSRAAQLCGPDRLRVAGEVHRFRTSDVSQATLASVAPVFTVTKFDKQGNVTSFERKK FT TELYQELGLQARDLRFQHVMSITVRNNRIIMRMEYLKAVITPECLLILDYRNLNLEQWL FT FRELPSQLSGEGQLVTYPLPFEFRAIEALLQYWINTLQGKLSILQPLILETLDALVDPK FT HSSVDRSKLHILLQNGKSLSELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEK FT SSAGIDHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNL FT QLTMGTFSLSLFGLMGVAFGMNLESSLEEDHRIFWLITGIMFMGSGLIWRRLLSFLGRQ FT LEAPLPPMMASLPKKTLLADRSMELKNSLRLDGLGSGRSILTNR" FT mRNA join(<24403420..24403464,24405396..24405469, FT 24408636..24408672,24409689..24409721,24416639..24416741, FT 24418312..24418464,24418689..>24418789) FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-007" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: ESTs: Em:AW002479" FT CDS join(<24403420..24403464,24405396..24405469, FT 24408636..24408672,24409689..24409721,24416639..24416741, FT 24418312..24418464,24418689..>24418789) FT /codon_start=3 FT /gene="MRS2L" FT /locus_tag="RP11-95P3.1-007" FT /standard_name="OTTHUMP00000016087" FT /product="MRS2-like, magnesium homeostasis factor (S. FT cerevisiae)" FT /note="match: proteins: Sw:P87149 Tr:Q9LXD2 Tr:Q9LYT9 FT Tr:Q9S9N4 Tr:Q9SAH0 Tr:Q9ZPR4" FT /protein_id="CAI17109.1" FT /translation="RAAQLCGPDRLRVAGEVHRFRTSDVSQATLASVAPVFTVTKFDKQ FT GNVTSFERKKTELYQELETDIKIFKESILEILDEEELLEELCVSKWSDPQVFEKSSAGI FT DHAEEMELLLENYYRLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMG FT TFSLSLFGLMGVAFGMNL" FT polyA_signal 24423685..24423690 FT polyA_site 24423705 FT polyA_signal 24424467..24424472 FT polyA_site 24424491 FT polyA_signal 24425792..24425797 FT polyA_site 24425810 FT polyA_site complement(24429061) FT polyA_signal complement(24429074..24429079) FT mRNA complement(join(24424793..24425210,24429203..24429346, FT 24433415..24433465,24433591..24433774,24436040..24436108)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-002" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: ESTs: Em:AL531638.1" FT misc_feature 24439530..24439904 FT /note="Sequence from overlapping clone dJ282H10 (AL132672). FT Assembly confirmed by restriction digest" FT misc_feature 24440053..24440376 FT /note="Sequence from overlapping clone dJ282H10 (AL132672). FT Assembly confirmed by restriction digest" FT misc_feature 24454576 FT /note="Clone_left_end: RP1-73M23" FT misc_feature 24456676..24583565 FT /note="annotated region of clone" FT polyA_site complement(24473472) FT polyA_signal complement(24473489..24473494) FT CDS complement(join(24547393..24547571,24551662..24551753, FT 24554769..24554859,24556835..24556957,24559241..24559383, FT 24563587..24563746,24564430..24564568,24566825..24566976, FT 24569009..24569157,24570131..24570263,24572803..24572926, FT 24576596..24576824,24578338..24578470,24580086..24580178, FT 24581154..24581241,24582477..24582574,AL512385.10:367..465, FT AL512385.10:5356..5548,AL512385.10:12636..13381, FT AL512385.10:17812..17866)) FT /gene="KIAA0319" FT /locus_tag="RP1-73M23.3-001" FT /standard_name="OTTHUMP00000016089" FT /product="KIAA0319" FT /protein_id="CAI22601.1" FT /translation="MAPPTGVLSSLLLLVTIAGCARKQCSEGRTYSNAVISPNLETTRI FT MRVSHTFPVVDCTAACCDLSSCDLAWWFEGRCYLVSCPHKENCEPKKMGPIRSYLTFVL FT RPVQRPAQLLDYGDMMLNRGSPSGIWGDSPEDIRKDLTFLGKDWGLEEMSEYSDDYREL FT EKDLLQPSGKQEPRGSAEYTDWGLLPGSEGAFNSSVGDSPAVPAETQQDPELHYLNESA FT STPAPKLPERSVLLPLPTTPSSGEVLEKEKASQLQEQSSNSSGKEVLMPSHSLPPASLE FT LSSVTVEKSPVLTVTPGSTEHSIPTPPTSAAPSESTPSELPISPTTAPRTVKELTVSAG FT DNLIITLPDNEVELKAFVAPAPPVETTYNYEWNLISHPTDYQGEIKQGHKQTLNLSQLS FT VGLYVFKVTVSSENAFGEGFVNVTVKPARRVNLPPVAVVSPQLQELTLPLTSALIDGSQ FT STDDTEIVSYHWEEINGPFIEEKTSVDSPVLRLSNLDPGNYSFRLTVTDSDGATNSTTA FT ALIVNNAVDYPPVANAGPNHTITLPQNSITLNGNQSSDDHQIVLYEWSLGPGSEGKHVV FT MQGVQTPYLHLSAMQEGDYTFQLKVTDSSRQQSTAVVTVIVQPENNRPPVAVAGPDKEL FT IFPVESATLDGSSSSDDHGIVFYHWEHVRGPSAVEMENIDKAIATVTGLQVGTYHFRLT FT VKDQQGLSSTSTLTVAVKKENNSPPRARAGGRHVLVLPNNSITLDGSRSTDDQRIVSYL FT WIRDGQSPAAGDVIDGSDHSVALQLTNLVEGVYTFHLRVTDSQGASDTDTATVEVQPDP FT RKSGLVELTLQVGVGQLTEQRKDTLVRQLAVLLNVLDSDIKVQKIRAHSDLSTVIVFYV FT QSRPPFKVLKAAEVARNLHMRLSKEKADFLLFKVLRVDTAGCLLKCSGHGHCDPLTKRC FT ICSHLWMENLIQRYIWDGESNCEWSIFYVTVLAFTLIVLTGGFTWLCICCCKRQKRTKI FT RKKTKYTILDNMDEQERMELRPKYGIKHRSTEHNSSLMVSESEFDSDQDTIFSREKMER FT GNPKVSMNGSIRNGASFSYCSKDR" FT mRNA complement(join(24473307..24473895,24475349..24475459, FT 24476409..24476506,24480109..24480187,24486303..24486358, FT 24489643..24489799)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-003" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: ESTs: Em:AA001930.1 Em:AI040379.1 FT Em:AV699478.1 Em:AV699786.1 Em:BG565942.1" FT /note="match: cDNAs: Em:BC020748.1" FT CDS complement(join(24473806..24473895,24475349..24475459, FT 24476409..24476506,24480109..24480187,24486303..24486358, FT 24489643..24489739)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-003" FT /standard_name="OTTHUMP00000017722" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: proteins: Tr:Q8WW82" FT /protein_id="CAD92520.1" FT /translation="MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNG FT RVNYRELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENY FT PLPWEKDTEKLVAFLFGITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDF FT GTVYLHLLNFLVV" FT mRNA complement(join(24473653..24473895,24475349..24475459, FT 24476409..24476506,24480109..24480187,24489643..24489807)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-004" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: ESTs: Em:BG562713.1" FT mRNA complement(join(AL359713.25:124696..125637, FT AL359713.25:129706..129756,AL359713.25:129882..129908, FT AL359713.25:133095..133255,AL359713.25:133632..133808, FT AL359713.25:142065..142158,AL359713.25:142245..142350, FT AL359713.25:143357..143498,AL359713.25:144396..144552, FT AL359713.25:144653..144727,AL359713.25:146308..146418, FT AL359713.25:150534..150720,24456726..24456865, FT 24460507..24460627,24462958..24463023,24466908..24467047, FT 24467140..24467167,24467395..24467502,24472810..24472864, FT 24473847..24473895,24475349..24475459,24476409..24476506, FT 24480109..24480187,24486303..24486358,24489643..24489850)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-001" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: ESTs: Em:AA001730.1 Em:AA109910.1 FT Em:AA211064.1 Em:AA214590.1 Em:AA389338.1 Em:AI048613.1 FT Em:AI097839.1 Em:AI122028.1 Em:AI224937.1 Em:AI243214.1 FT Em:AI324398.1 Em:AI324946.1 Em:AI527199.1 Em:AI658809.1 FT Em:AI670096.1 Em:AV683666.1 Em:AV683732.1 Em:AV694216.1 FT Em:AW418568.1 Em:BB579855.1 Em:BE252265.1 Em:BE252628.1 FT Em:BE259107.1 Em:BE618539.1 Em:BF110141.1 Em:BF234608.1 FT Em:BF235360.1 Em:BF236124.1 Em:BF384400.1 Em:BF550985.1 FT Em:BF660153.1 Em:BG085375.1 Em:BG182770.1 Em:BG184337.1 FT Em:BG186964.1 Em:BG192178.1 Em:BG196735.1 Em:BG198788.1 FT Em:BG199312.1 Em:BG545290.1 Em:BG709751.1 Em:BI146756.1 FT Em:BI149176.1 Em:BI219614.1 Em:BI328132.1 Em:BI554399.1 FT Em:BM458510.1 Em:N69672.1 Em:N94280.1 Em:R10588.1 FT Em:R10589.1 Em:R10590.1 Em:R86028.1 Em:T55751.1" FT /note="match: cDNAs: Em:AF050666.1 Em:AJ308108.1 FT Em:AJ308109.1 Em:AK004957.1 Em:AY007546.2 Em:AY081194.1 FT Em:BC007614.1 Em:BC019146.1 Em:L11701.1 Em:L11702.1 FT Em:M60804.1" FT CDS complement(join(AL359713.25:125551..125637, FT AL359713.25:129706..129756,AL359713.25:129882..129908, FT AL359713.25:133095..133255,AL359713.25:133632..133808, FT AL359713.25:142065..142158,AL359713.25:142245..142350, FT AL359713.25:143357..143498,AL359713.25:144396..144552, FT AL359713.25:144653..144727,AL359713.25:146308..146418, FT AL359713.25:150534..150720,24456726..24456865, FT 24460507..24460627,24462958..24463023,24466908..24467047, FT 24467140..24467167,24467395..24467502,24472810..24472864, FT 24473847..24473895,24475349..24475459,24476409..24476506, FT 24480109..24480187,24486303..24486358,24489643..24489739)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-001" FT /standard_name="OTTHUMP00000017721" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: proteins: Sw:O70362 Sw:P80108 Sw:P80109 FT Sw:Q15127 Tr:Q8VCU2 Tr:Q9H7R2" FT /protein_id="CAI22602.1" FT /translation="MSAFRLWPGLLIMLGSLCHRGSPCGLSTHVEIGHRALEFLQLHNG FT RVNYRELLLEHQDAYQAGIVFPDCFYPSICKGGKFHDVSESTHWTPFLNASVHYIRENY FT PLPWEKDTEKLVAFLFGITSHMAADVSWHSLGLEQGFLRTMGAIDFHGSYSEAHSAGDF FT GGDVLSQFEFNFNYLARRWYVPVKDLLGIYEKLYGRKVITENVIVDCSHIQFLEMYGEM FT LAVSKLYPTYSTKSPFLVEQFQEYFLGGLDDMAFWSTNIYHLTSFMLENGTSDCNLPEN FT PLFIACGGQQNHTQGSKMQKNDFHRNLTTSLTESVDRNINYTERGVFFSVNSWTPDSMS FT FIYKALERNIRTMFIGGSQLSQKHVSSPLASYFLSFPYARLGWAMTSADLNQDGHGDLV FT VGAPGYSRPGHIHIGRVYLIYGNDLGLPPVDLDLDKEAHRILEGFQPSGRFGSALAVLD FT FNVDGVPDLAVGAPSVGSEQLTYKGAVYVYFGSKQGGMSSSPNITISCQDIYCNLGWTL FT LAADVNGDSEPDLVIGSPFAPGGGKQKGIVAAFYSGPSLSDKEKLNVEAANWTVRGEED FT FSWFGYSLHGVTVDNRTLLLVGSPTWKNASRLGHLLHIRDEKKSLGRVYGYFPPNGQSW FT FTISGDKAMGKLGTSLSSGHVLMNGTLKQVLLVGAPTYDDVSKVAFLTVTLHQGGATRM FT YALTSDAQPLLLSTFSGDRRFSRFGGVLHLSDLDDDGLDEIIMAAPLRIADVTSGLIGG FT EDGRVYVYNGKETTLGDMTGKCKSWITPCPEEKAQYVLISPEASSRFGSSLITVRSKAK FT NQVVIAAGRSSLGARLSGALHVYSLGSD" FT mRNA complement(join(24466924..24467047,24467140..24467167, FT 24467395..24467502,24472810..24472864,24473847..24473895, FT 24475349..24475459,24476409..24476506,24480109..24480187, FT 24486303..24486358,24489643..24489725,24495195..24495433)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-006" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: ESTs: Em:AA768702.1 Em:AI364711.1 FT Em:AI802084.1 Em:AW272400.1 Em:AW977530.1 Em:BE222410.1 FT Em:BE468248.1 Em:BM909421.1 Em:BQ059617.1 Em:BQ062450.1 FT Em:BQ066223.1" FT mRNA complement(join(24475349..24475459,24476409..24476506, FT 24480109..24480187,24489643..24489725,24495195..24495427)) FT /gene="GPLD1" FT /locus_tag="RP11-95P3.3-005" FT /product="glycosylphosphatidylinositol specific FT phospholipase D1" FT /note="match: ESTs: Em:AW139551.1 Em:BE674158.1" FT mRNA join(24495197..24495578,24502751..24502834, FT 24503491..24503661,24505097..24505213,24515395..24515538, FT 24520629..24520772,24522995..24523153,24528225..24528394, FT 24532347..24532405,24533735..24537435) FT /gene="ALDH5A1" FT /locus_tag="RP1-73M23.1-001" FT /product="aldehyde dehydrogenase 5 family, member A1" FT /note="match: ESTs: Em:AA135160 Em:AA135256 Em:AA166709 FT Em:AA167067 Em:AA169518 Em:AA262077 Em:AA278493 Em:AA279027 FT Em:AA455344 Em:AA455381 Em:AA486410 Em:AA563986 Em:AA592943 FT Em:AA602143 Em:AA628133 Em:AA648510 Em:AA693393 Em:AA693408 FT Em:AA707229 Em:AA725259 Em:AA765566 Em:AA838425 Em:AA854404 FT Em:AA884035 Em:AA907243 Em:AA913787 Em:AI028465 Em:AI028467 FT Em:AI078515 Em:AI096495 Em:AI150629 Em:AI203436 Em:C20982 FT Em:D25573 Em:H06675 Em:H06676 Em:H46643 Em:N52177 Em:R00281 FT Em:R11674 Em:R12281 Em:R96351 Em:R98061 Em:R98302 Em:T09071 FT Em:T30846 Em:T99931" FT /note="match: cDNAs: Em:L34821 Em:Y11192" FT CDS join(24495225..24495578,24502751..24502834, FT 24503491..24503661,24505097..24505213,24515395..24515538, FT 24520629..24520772,24522995..24523153,24528225..24528394, FT 24532347..24532405,24533735..24533940) FT /gene="ALDH5A1" FT /locus_tag="RP1-73M23.1-001" FT /standard_name="OTTHUMP00000016088" FT /product="aldehyde dehydrogenase 5 family, member A1" FT /note="match: proteins: Sw:P25526 Sw:P51649 Sw:P51650 FT Tr:Q7D3U2 Tr:Q8VPD7" FT /protein_id="CAA20248.1" FT /translation="MATCIWLRSCGARRLGSTFPGCRLRPRAGGLVPASGPAPGPAQLR FT CYAGRLAGLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRA FT AYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFF FT LEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAG FT CTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKIS FT FTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTC FT VCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDA FT VSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAI FT ANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGS FT KYGIDEYLELKYVCYGGL" FT mRNA join(AL031775.1:67875..68294, FT complement(AL512385.10:17812..17971), FT complement(AL512385.10:12636..13381), FT complement(AL512385.10:5356..5548), FT complement(AL512385.10:367..465), FT complement(24582477..24582574), FT complement(24581154..24581241), FT complement(24580086..24580178), FT complement(24578338..24578470), FT complement(24576596..24576824), FT complement(24572803..24572926), FT complement(24570131..24570263), FT complement(24569009..24569157), FT complement(24566825..24566976), FT complement(24564430..24564568), FT complement(24563587..24563746), FT complement(24559241..24559383), FT complement(24556835..24556957), FT complement(24554769..24554859), FT complement(24551662..24551753), FT complement(24544335..24547571)) FT /gene="KIAA0319" FT /locus_tag="RP1-73M23.3-001" FT /product="KIAA0319" FT /note="match: ESTs: Em:AA192473 Em:AA907928 Em:AI369208 FT Em:AI479408 Em:AI683434 Em:AL044313 Em:AL589494 Em:AU130115 FT Em:AU152136 Em:BF930670 Em:N50160 Em:R55692 Em:R55693 FT Em:R61546 Em:R61600 Em:Z44817" FT /note="match: cDNAs: Em:AB002317.1" FT polyA_signal 24534015..24534020 FT polyA_site 24534040 FT polyA_signal 24534843..24534848 FT polyA_site 24534859 FT polyA_signal 24537399..24537404 FT polyA_site 24537435 FT polyA_site complement(24544335) FT polyA_signal complement(24544351..24544356) FT polyA_site complement(24544587) FT polyA_signal complement(24544603..24544608) FT polyA_site complement(24547153) FT polyA_signal complement(24547183..24547188) FT misc_feature 24583566..24612157 FT /note="annotated region of clone" FT CDS join(24598240..24598819,24599141..24600012) FT /pseudo FT /locus_tag="RP11-252E3.2-001" FT /product="keratin 8 (KRT8) pseudogene" FT /note="match: proteins: Sw:O93532 Sw:P02538 Sw:P05786 FT Sw:P05787 Sw:P08729 Sw:P08729 Sw:P08729 Sw:P08776 Sw:P11679 FT Sw:P11679 Sw:P16878 Sw:P18520 Sw:P50446 Sw:Q10758 Sw:Q28810 FT Tr:O42434 Tr:Q91219 Tr:Q9I9P5 Tr:Q9PV92" FT CDS complement(join(AL031230.1:90818..90996, FT AL031230.1:95087..95178,AL031230.1:98194..98284, FT AL031230.1:100260..100382,AL031230.1:102666..102808, FT AL031230.1:107012..107171,AL031230.1:107855..107993, FT AL031230.1:110250..110401,AL031230.1:112434..112582, FT AL031230.1:113556..113688,AL031230.1:116228..116351, FT AL031230.1:120021..120249,AL031230.1:121763..121895, FT AL031230.1:123511..123603,AL031230.1:124579..124666, FT AL031230.1:125902..125999,24583832..24583930, FT 24588821..24589013,24596101..24596846,24601277..24601331)) FT /gene="KIAA0319" FT /locus_tag="RP1-73M23.3-001" FT /standard_name="OTTHUMP00000016089" FT /product="KIAA0319" FT /protein_id="CAH71730.1" FT /translation="MAPPTGVLSSLLLLVTIAGCARKQCSEGRTYSNAVISPNLETTRI FT MRVSHTFPVVDCTAACCDLSSCDLAWWFEGRCYLVSCPHKENCEPKKMGPIRSYLTFVL FT RPVQRPAQLLDYGDMMLNRGSPSGIWGDSPEDIRKDLTFLGKDWGLEEMSEYSDDYREL FT EKDLLQPSGKQEPRGSAEYTDWGLLPGSEGAFNSSVGDSPAVPAETQQDPELHYLNESA FT STPAPKLPERSVLLPLPTTPSSGEVLEKEKASQLQEQSSNSSGKEVLMPSHSLPPASLE FT LSSVTVEKSPVLTVTPGSTEHSIPTPPTSAAPSESTPSELPISPTTAPRTVKELTVSAG FT DNLIITLPDNEVELKAFVAPAPPVETTYNYEWNLISHPTDYQGEIKQGHKQTLNLSQLS FT VGLYVFKVTVSSENAFGEGFVNVTVKPARRVNLPPVAVVSPQLQELTLPLTSALIDGSQ FT STDDTEIVSYHWEEINGPFIEEKTSVDSPVLRLSNLDPGNYSFRLTVTDSDGATNSTTA FT ALIVNNAVDYPPVANAGPNHTITLPQNSITLNGNQSSDDHQIVLYEWSLGPGSEGKHVV FT MQGVQTPYLHLSAMQEGDYTFQLKVTDSSRQQSTAVVTVIVQPENNRPPVAVAGPDKEL FT IFPVESATLDGSSSSDDHGIVFYHWEHVRGPSAVEMENIDKAIATVTGLQVGTYHFRLT FT VKDQQGLSSTSTLTVAVKKENNSPPRARAGGRHVLVLPNNSITLDGSRSTDDQRIVSYL FT WIRDGQSPAAGDVIDGSDHSVALQLTNLVEGVYTFHLRVTDSQGASDTDTATVEVQPDP FT RKSGLVELTLQVGVGQLTEQRKDTLVRQLAVLLNVLDSDIKVQKIRAHSDLSTVIVFYV FT QSRPPFKVLKAAEVARNLHMRLSKEKADFLLFKVLRVDTAGCLLKCSGHGHCDPLTKRC FT ICSHLWMENLIQRYIWDGESNCEWSIFYVTVLAFTLIVLTGGFTWLCICCCKRQKRTKI FT RKKTKYTILDNMDEQERMELRPKYGIKHRSTEHNSSLMVSESEFDSDQDTIFSREKMER FT GNPKVSMNGSIRNGASFSYCSKDR" FT misc_feature 24611958 FT /note="Clone_left_end: RP1-30M3" FT mRNA join(AL031775.1:67875..68294, FT complement(24601277..24601436), FT complement(24596101..24596846), FT complement(24588821..24589013), FT complement(24583832..24583930), FT complement(AL031230.1:125902..125999), FT complement(AL031230.1:124579..124666), FT complement(AL031230.1:123511..123603), FT complement(AL031230.1:121763..121895), FT complement(AL031230.1:120021..120249), FT complement(AL031230.1:116228..116351), FT complement(AL031230.1:113556..113688), FT complement(AL031230.1:112434..112582), FT complement(AL031230.1:110250..110401), FT complement(AL031230.1:107855..107993), FT complement(AL031230.1:107012..107171), FT complement(AL031230.1:102666..102808), FT complement(AL031230.1:100260..100382), FT complement(AL031230.1:98194..98284), FT complement(AL031230.1:95087..95178), FT complement(AL031230.1:87760..90996)) FT /gene="KIAA0319" FT /locus_tag="RP1-73M23.3-001" FT /product="KIAA0319" FT /note="match: ESTs: Em:AA192473 Em:AA907928 Em:AI369208 FT Em:AI479408 Em:AI683434 Em:AL044313 Em:AL589494 Em:AU130115 FT Em:AU152136 Em:BF930670 Em:N50160 Em:R55692 Em:R55693 FT Em:R61546 Em:R61600 Em:Z44817" FT /note="match: cDNAs: Em:AB002317.1" FT misc_feature complement(24612158..24714257) FT /note="annotated region of clone" FT mRNA complement(join(24706064..24706490,24709005..24709139, FT AL133264.10:101..211)) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-002" FT /product="chromosome 6 open reading frame 62" FT /note="match: ESTs: Em:BG772628 Em:BG772628.1" FT CDS complement(join(24706365..24706490,24709005..24709139, FT AL133264.10:389..511,AL133264.10:2219..2395, FT AL133264.10:4611..4739)) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-001" FT /standard_name="OTTHUMP00000016093" FT /product="chromosome 6 open reading frame 62" FT /note="match: proteins: Sw:Q99LU8 Sw:Q9GZU0 Tr:Q961D0 FT Tr:Q99K03 Tr:Q9N0B2 Tr:Q9QEJ3 Tr:Q9W384 Tr:Q9XWI7" FT /protein_id="CAI20135.1" FT /translation="MGDPNSRKKQALNRLRAQLRKKKESLADQFDFKMYIAFVFKEKKK FT KSALFEVSEVIPVMTNNYEENILKGVRDSSYSLESSLELLQKDVVQLHAPRYQSMRRDV FT IGCTQEMDFILWPRNDIEKIVCLLFSRWKESDEPFRPVQAKFEFHHGDYEKQFLHVLSR FT KDKTGIVVNNPNQSVFLFIDRQHLQTPKNKATIFKLCSICLYLPQEQLTHWAVGTIEDH FT LRPYMPE" FT mRNA complement(join(24705089..24706490,24709005..24709139, FT AL133264.10:389..511,AL133264.10:2219..2395, FT AL133264.10:4611..6907)) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-001" FT /product="chromosome 6 open reading frame 62" FT /note="match: ESTs: Em:AA084220 Em:AA093151 Em:AA168907 FT Em:AA197971 Em:AA200765 Em:AA237701 Em:AA292313 Em:AA295166 FT Em:AA402388 Em:AA478637 Em:AA591228 Em:AA612170 Em:AA638148 FT Em:AA647423 Em:AA647435 Em:AA647742 Em:AA672357 Em:AA798123 FT Em:AA798467 Em:AA815944 Em:AA833812 Em:AA863774 Em:AI053561 FT Em:AI054330 Em:AI122327 Em:AI156738 Em:AI191279 Em:AI194277 FT Em:AI284633 Em:AI316639 Em:AI390324 Em:AI458673 Em:AI688647 FT Em:AI694146 Em:AI694199 Em:AI788240 Em:AI802319 Em:AI807413 FT Em:AI831412 Em:AI932363 Em:AI935446 Em:AI982078 Em:AJ396992 FT Em:AJ398211 Em:AL529211 Em:AL563388.1 Em:AL601897.1 FT Em:AU051650 Em:AU125496 Em:AU135776 Em:AU137791 Em:AU138464 FT Em:AV656408 Em:AV686324 Em:AV698092 Em:AV703346 Em:AV708342 FT Em:AV708873 Em:AV709145 Em:AV709526 Em:AV739602 Em:AV742411 FT Em:AV743612 Em:AV744587 Em:AV745018 Em:AW050065 Em:AW063931 FT Em:AW270998 Em:AW300107 Em:AW300121 Em:AW301984 Em:AW302318 FT Em:AW302718 Em:AW302841 Em:AW302861 Em:AW303029 Em:AW355281 FT Em:AW822881 Em:AW859606 Em:AW959243 Em:BB067326 Em:BB123906 FT Em:BB609972 Em:BB624305 Em:BB628344 Em:BB654156 Em:BB823708 FT Em:BE007675 Em:BE049029 Em:BE049182 Em:BE120619 Em:BE178692 FT Em:BE178693 Em:BE244058 Em:BE246922 Em:BE287246 Em:BE289710 FT Em:BE311050 Em:BE369398 Em:BE377181 Em:BE386264 Em:BE465032 FT Em:BE484573 Em:BE554360 Em:BE571717 Em:BE625094 Em:BE766876 FT Em:BE766886 Em:BE770856 Em:BE785982.1 Em:BE813002 FT Em:BE817780 Em:BE829341 Em:BE829344 Em:BE829355 Em:BE829359 FT Em:BE893564 Em:BE895461 Em:BE896141 Em:BE908143 Em:BE913030 FT Em:BE945891 Em:BE991271 Em:BE992722 Em:BF015474 Em:BF021751 FT Em:BF022025 Em:BF029248 Em:BF037603 Em:BF060909 Em:BF064161 FT Em:BF109576 Em:BF111215 Em:BF122334 Em:BF137583 Em:BF139381 FT Em:BF140373 Em:BF145038 Em:BF148549 Em:BF150174 Em:BF165619 FT Em:BF207643 Em:BF326037 Em:BF326041 Em:BF326042 Em:BF326045 FT Em:BF334390 Em:BF341149 Em:BF376614 Em:BF378829 Em:BF380539 FT Em:BF380550 Em:BF465841 Em:BF535383 Em:BF578793 Em:BF582307 FT Em:BF748822 Em:BF748938 Em:BF748963 Em:BF765346 Em:BF766403 FT Em:BF784199 Em:BF789335 Em:BF789696 Em:BF885392 Em:BF896088 FT Em:BF940327 Em:BF984391 Em:BG030354 Em:BG035327 Em:BG088552 FT Em:BG116557 Em:BG148023 Em:BG167018 Em:BG168325 Em:BG247693 FT Em:BG252842 Em:BG295272 Em:BG295445 Em:BG342500 Em:BG610013 FT Em:BG655426 Em:BG667600 Em:BG677384.1 Em:BG678705 FT Em:BG692520 Em:BG717389 Em:BG801183 Em:BG802707 Em:BG803992 FT Em:BG863302 Em:BG914583 Em:BG917993 Em:BG940215 Em:BG943615 FT Em:BG975946 Em:BI080618 Em:BI092275 Em:BI106992 Em:BI107793 FT Em:BI108344 Em:BI222784 Em:BI258149 Em:BI326830 Em:BI651746 FT Em:BI659175 Em:BI666111 Em:BI688353 Em:BI689042 Em:BI694119 FT Em:BI696541 Em:BI696575 Em:BI696638 Em:BI733610 Em:BI753721 FT Em:BI754669 Em:BI851772 Em:BI856689.1 Em:BI872006 FT Em:BI872428 Em:BI903238 Em:BI903250 Em:BI960823 Em:BI986171 FT Em:BM016286 Em:BM069622 Em:BM069876 Em:BM147734 Em:BM237580 FT Em:BM238719 Em:BM238848 Em:BM423047 Em:BM423107 Em:F11344 FT Em:F20959 Em:H17162 Em:H98057 Em:N56057 Em:R25494 Em:T11219 FT Em:T51727 Em:W47233" FT /note="match: cDNAs: Em:AB046018.1 Em:AJ420475.1 FT Em:AK022681.1 Em:AL136632.1 Em:BC002217.1 Em:BC005537.1" FT CDS complement(join(24706365..24706490,24709005..24709139, FT AL133264.10:389..511,AL133264.10:2219..2395, FT AL133264.10:5931..5972)) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-003" FT /standard_name="OTTHUMP00000016094" FT /product="chromosome 6 open reading frame 62" FT /protein_id="CAI20136.1" FT /translation="MSENLSDPVSPVVRKKKSALFEVSEVIPVMTNNYEENILKGVRDS FT SYSLESSLELLQKDVVQLHAPRYQSMRRDVIGCTQEMDFILWPRNDIEKIVCLLFSRWK FT ESDEPFRPVQAKFEFHHGDYEKQFLHVLSRKDKTGIVVNNPNQSVFLFIDRQHLQTPKN FT KATIFKLCSICLYLPQEQLTHWAVGTIEDHLRPYMPE" FT mRNA complement(join(24706324..24706490,24709005..24709139, FT AL133264.10:389..511,AL133264.10:2219..2395, FT AL133264.10:5931..6069)) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-003" FT /product="chromosome 6 open reading frame 62" FT /note="match: ESTs: Em:BG342500.1 Em:BG692520.1 FT Em:BG803992.1" FT polyA_signal complement(24705129..24705134) FT polyA_site complement(24701940) FT polyA_signal complement(24701917..24701922) FT mRNA join(24687630..24687921,24698111..24698295, FT 24701687..24701942) FT /gene="THEM2" FT /locus_tag="RP1-30M3.2-002" FT /product="thioesterase superfamily member 2" FT /note="match: ESTs: Em:BG219890 Em:BG256069" FT mRNA join(24667299..24667572,24698111..24698295, FT 24701687..24701942) FT /gene="THEM2" FT /locus_tag="RP1-30M3.2-001" FT /product="thioesterase superfamily member 2" FT /note="match: ESTs: Em:AA614605 Em:AA928745 Em:AI017897 FT Em:AI052396 Em:BF407527 Em:BF475709 Em:BF594161" FT /note="match: cDNAs: Em:AF155649.1 Em:AF220186.1 FT Em:AF274952.1 Em:AK000508.1 Em:AK002261.1 Em:AK008624.1 FT Em:BC000894.1" FT CDS join(24667492..24667572,24698111..24698295, FT 24701687..24701843) FT /gene="THEM2" FT /locus_tag="RP1-30M3.2-001" FT /standard_name="OTTHUMP00000016090" FT /product="thioesterase superfamily member 2" FT /note="match: proteins: Sw:P34419 Sw:P87304 Sw:P95914 FT Sw:Q9CQR4 Sw:Q9NPJ3 Tr:P93828 Tr:Q18187 Tr:Q9ASQ1 Tr:Q9VZZ5 FT Tr:Q9VZZ6" FT /protein_id="CAD92509.1" FT /translation="MTSMTQSLREVIKAMTKARNFERVLGKITLVSAAPGKVICEMKVE FT EEHTNAIGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITA FT HVLKQGKTLAFTSVDLTNKATGKLIAQGRHTKHLGN" FT mRNA complement(join(24650205..24651297,24653211..24653381, FT 24654640..24654758,24658040..24658131,24658789..24658962, FT 24666754..24666839,24666926..24667261)) FT /gene="RP1-30M3.3" FT /locus_tag="RP1-30M3.3-001" FT /product="TRAF and TNF receptor-associated protein FT (TTRAP)(EAP2, AD022, MGC9099)" FT /note="match: ESTs: Em:BG719977.1 Em:BM554324.1" FT /note="match: cDNAs: Em:AF201687.1 Em:AF223469.1 FT Em:AJ251328.1 Em:AJ269473.1 Em:AK002168.1 Em:AK009089.1 FT Em:BC017553.1" FT mRNA complement(join(24651215..24651297,24653211..24653381, FT 24666754..24666839,24666926..24667158)) FT /gene="RP1-30M3.3" FT /locus_tag="RP1-30M3.3-005" FT /product="TRAF and TNF receptor-associated protein FT (TTRAP)(EAP2, AD022, MGC9099)" FT /note="match: ESTs: Em:BI345352.1" FT CDS complement(join(24651016..24651297,24653211..24653381, FT 24654640..24654758,24658040..24658131,24658789..24658962, FT 24666754..24666839,24666926..24667090)) FT /gene="RP1-30M3.3" FT /locus_tag="RP1-30M3.3-001" FT /standard_name="OTTHUMP00000016091" FT /product="TRAF and TNF receptor-associated protein FT (TTRAP)(EAP2, AD022, MGC9099)" FT /note="match: proteins: Sw:O95551" FT /protein_id="CAA21141.1" FT /translation="MELGSCLEGGREAAEEEGEPEVKKRRLLCVEFASVASCDAAVAQC FT FLAENDWEMERALNSYFEPPVEESALERRPETISEPKTYVDLTNEETTDSTTSKISPSE FT DTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYSPDVIFLQEVIPPYYSYLKK FT RSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGNELCL FT MTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNIV FT DVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDRIFFRAAAEEGHIIPRSLDLLGLE FT KLDCGRFPSDHWGLLCNLDIIL" FT mRNA complement(join(24666215..24666839,24666926..24667014)) FT /gene="RP1-30M3.3" FT /locus_tag="RP1-30M3.3-003" FT /product="TRAF and TNF receptor-associated protein FT (TTRAP)(EAP2, AD022, MGC9099)" FT /note="match: ESTs: Em:BE619103.1 Em:BF679649.1 FT Em:BM153209.1" FT mRNA complement(join(24650207..24651297,24653211..24653381, FT 24654640..24654758,24658040..24658131,24658789..24658962, FT 24666347..24666819)) FT /gene="RP1-30M3.3" FT /locus_tag="RP1-30M3.3-002" FT /product="TRAF and TNF receptor-associated protein FT (TTRAP)(EAP2, AD022, MGC9099)" FT /note="match: cDNAs: Em:AJ420495.1" FT CDS complement(join(24651016..24651297,24653211..24653381, FT 24654640..24654758,24658040..24658131,24658789..24658962, FT 24666347..24666423)) FT /gene="RP1-30M3.3" FT /locus_tag="RP1-30M3.3-002" FT /standard_name="OTTHUMP00000016092" FT /product="TRAF and TNF receptor-associated protein FT (TTRAP)(EAP2, AD022, MGC9099)" FT /protein_id="CAD92510.1" FT /translation="MATWKSPCFLYCLFILGPRLTGQNNSVDLTNEETTDSTTSKISPS FT EDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYSPDVIFLQEVIPPYYSYLK FT KRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGNELC FT LMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGLPNNI FT VDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDRIFFRAAAEEGHIIPRSLDLLGL FT EKLDCGRFPSDHWGLLCNLDIIL" FT mRNA complement(join(24654606..24654758,24658040..24658131, FT 24658789..24659400)) FT /gene="RP1-30M3.3" FT /locus_tag="RP1-30M3.3-004" FT /product="TRAF and TNF receptor-associated protein FT (TTRAP)(EAP2, AD022, MGC9099)" FT /note="match: ESTs: Em:BG623866.1" FT polyA_signal complement(24650221..24650226) FT polyA_site complement(24650207) FT mRNA complement(join(AL031230.1:87760..90996, FT AL031230.1:95087..95178,AL031230.1:98194..98284, FT AL031230.1:100260..100382,AL031230.1:102666..102808, FT AL031230.1:107012..107171,AL031230.1:107855..107993, FT AL031230.1:110250..110401,AL031230.1:112434..112582, FT AL031230.1:113556..113688,AL031230.1:116228..116351, FT AL031230.1:120021..120249,AL031230.1:121763..121895, FT AL031230.1:123511..123603,AL031230.1:124579..124666, FT AL031230.1:125902..125999,AL512385.10:367..465, FT AL512385.10:5356..5548,AL512385.10:12636..13381, FT AL512385.10:17812..17971,24645964..24646383)) FT /gene="KIAA0319" FT /locus_tag="RP1-73M23.3-001" FT /product="KIAA0319" FT /note="match: ESTs: Em:AA192473 Em:AA907928 Em:AI369208 FT Em:AI479408 Em:AI683434 Em:AL044313 Em:AL589494 Em:AU130115 FT Em:AU152136 Em:BF930670 Em:N50160 Em:R55692 Em:R55693 FT Em:R61546 Em:R61600 Em:Z44817" FT /note="match: cDNAs: Em:AB002317.1" FT misc_feature 24714258..24797977 FT /note="annotated region of clone" FT mRNA join(complement(24714258..24714368),AL031775.1:5119..5253, FT AL031775.1:7768..8194) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-002" FT /product="chromosome 6 open reading frame 62" FT /note="match: ESTs: Em:BG772628 Em:BG772628.1" FT CDS join(complement(24718768..24718896), FT complement(24716376..24716552), FT complement(24714546..24714668),AL031775.1:5119..5253, FT AL031775.1:7768..7893) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-001" FT /standard_name="OTTHUMP00000016093" FT /product="chromosome 6 open reading frame 62" FT /note="match: proteins: Sw:Q99LU8 Sw:Q9GZU0 Tr:Q961D0 FT Tr:Q99K03 Tr:Q9N0B2 Tr:Q9QEJ3 Tr:Q9W384 Tr:Q9XWI7" FT /protein_id="CAI20341.1" FT /translation="MGDPNSRKKQALNRLRAQLRKKKESLADQFDFKMYIAFVFKEKKK FT KSALFEVSEVIPVMTNNYEENILKGVRDSSYSLESSLELLQKDVVQLHAPRYQSMRRDV FT IGCTQEMDFILWPRNDIEKIVCLLFSRWKESDEPFRPVQAKFEFHHGDYEKQFLHVLSR FT KDKTGIVVNNPNQSVFLFIDRQHLQTPKNKATIFKLCSICLYLPQEQLTHWAVGTIEDH FT LRPYMPE" FT mRNA join(complement(24718768..24721064), FT complement(24716376..24716552), FT complement(24714546..24714668),AL031775.1:5119..5253, FT AL031775.1:7768..9169) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-001" FT /product="chromosome 6 open reading frame 62" FT /note="match: ESTs: Em:AA084220 Em:AA093151 Em:AA168907 FT Em:AA197971 Em:AA200765 Em:AA237701 Em:AA292313 Em:AA295166 FT Em:AA402388 Em:AA478637 Em:AA591228 Em:AA612170 Em:AA638148 FT Em:AA647423 Em:AA647435 Em:AA647742 Em:AA672357 Em:AA798123 FT Em:AA798467 Em:AA815944 Em:AA833812 Em:AA863774 Em:AI053561 FT Em:AI054330 Em:AI122327 Em:AI156738 Em:AI191279 Em:AI194277 FT Em:AI284633 Em:AI316639 Em:AI390324 Em:AI458673 Em:AI688647 FT Em:AI694146 Em:AI694199 Em:AI788240 Em:AI802319 Em:AI807413 FT Em:AI831412 Em:AI932363 Em:AI935446 Em:AI982078 Em:AJ396992 FT Em:AJ398211 Em:AL529211 Em:AL563388.1 Em:AL601897.1 FT Em:AU051650 Em:AU125496 Em:AU135776 Em:AU137791 Em:AU138464 FT Em:AV656408 Em:AV686324 Em:AV698092 Em:AV703346 Em:AV708342 FT Em:AV708873 Em:AV709145 Em:AV709526 Em:AV739602 Em:AV742411 FT Em:AV743612 Em:AV744587 Em:AV745018 Em:AW050065 Em:AW063931 FT Em:AW270998 Em:AW300107 Em:AW300121 Em:AW301984 Em:AW302318 FT Em:AW302718 Em:AW302841 Em:AW302861 Em:AW303029 Em:AW355281 FT Em:AW822881 Em:AW859606 Em:AW959243 Em:BB067326 Em:BB123906 FT Em:BB609972 Em:BB624305 Em:BB628344 Em:BB654156 Em:BB823708 FT Em:BE007675 Em:BE049029 Em:BE049182 Em:BE120619 Em:BE178692 FT Em:BE178693 Em:BE244058 Em:BE246922 Em:BE287246 Em:BE289710 FT Em:BE311050 Em:BE369398 Em:BE377181 Em:BE386264 Em:BE465032 FT Em:BE484573 Em:BE554360 Em:BE571717 Em:BE625094 Em:BE766876 FT Em:BE766886 Em:BE770856 Em:BE785982.1 Em:BE813002 FT Em:BE817780 Em:BE829341 Em:BE829344 Em:BE829355 Em:BE829359 FT Em:BE893564 Em:BE895461 Em:BE896141 Em:BE908143 Em:BE913030 FT Em:BE945891 Em:BE991271 Em:BE992722 Em:BF015474 Em:BF021751 FT Em:BF022025 Em:BF029248 Em:BF037603 Em:BF060909 Em:BF064161 FT Em:BF109576 Em:BF111215 Em:BF122334 Em:BF137583 Em:BF139381 FT Em:BF140373 Em:BF145038 Em:BF148549 Em:BF150174 Em:BF165619 FT Em:BF207643 Em:BF326037 Em:BF326041 Em:BF326042 Em:BF326045 FT Em:BF334390 Em:BF341149 Em:BF376614 Em:BF378829 Em:BF380539 FT Em:BF380550 Em:BF465841 Em:BF535383 Em:BF578793 Em:BF582307 FT Em:BF748822 Em:BF748938 Em:BF748963 Em:BF765346 Em:BF766403 FT Em:BF784199 Em:BF789335 Em:BF789696 Em:BF885392 Em:BF896088 FT Em:BF940327 Em:BF984391 Em:BG030354 Em:BG035327 Em:BG088552 FT Em:BG116557 Em:BG148023 Em:BG167018 Em:BG168325 Em:BG247693 FT Em:BG252842 Em:BG295272 Em:BG295445 Em:BG342500 Em:BG610013 FT Em:BG655426 Em:BG667600 Em:BG677384.1 Em:BG678705 FT Em:BG692520 Em:BG717389 Em:BG801183 Em:BG802707 Em:BG803992 FT Em:BG863302 Em:BG914583 Em:BG917993 Em:BG940215 Em:BG943615 FT Em:BG975946 Em:BI080618 Em:BI092275 Em:BI106992 Em:BI107793 FT Em:BI108344 Em:BI222784 Em:BI258149 Em:BI326830 Em:BI651746 FT Em:BI659175 Em:BI666111 Em:BI688353 Em:BI689042 Em:BI694119 FT Em:BI696541 Em:BI696575 Em:BI696638 Em:BI733610 Em:BI753721 FT Em:BI754669 Em:BI851772 Em:BI856689.1 Em:BI872006 FT Em:BI872428 Em:BI903238 Em:BI903250 Em:BI960823 Em:BI986171 FT Em:BM016286 Em:BM069622 Em:BM069876 Em:BM147734 Em:BM237580 FT Em:BM238719 Em:BM238848 Em:BM423047 Em:BM423107 Em:F11344 FT Em:F20959 Em:H17162 Em:H98057 Em:N56057 Em:R25494 Em:T11219 FT Em:T51727 Em:W47233" FT /note="match: cDNAs: Em:AB046018.1 Em:AJ420475.1 FT Em:AK022681.1 Em:AL136632.1 Em:BC002217.1 Em:BC005537.1" FT CDS join(complement(24720088..24720129), FT complement(24716376..24716552), FT complement(24714546..24714668),AL031775.1:5119..5253, FT AL031775.1:7768..7893) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-003" FT /standard_name="OTTHUMP00000016094" FT /product="chromosome 6 open reading frame 62" FT /protein_id="CAI20342.1" FT /translation="MSENLSDPVSPVVRKKKSALFEVSEVIPVMTNNYEENILKGVRDS FT SYSLESSLELLQKDVVQLHAPRYQSMRRDVIGCTQEMDFILWPRNDIEKIVCLLFSRWK FT ESDEPFRPVQAKFEFHHGDYEKQFLHVLSRKDKTGIVVNNPNQSVFLFIDRQHLQTPKN FT KATIFKLCSICLYLPQEQLTHWAVGTIEDHLRPYMPE" FT mRNA join(complement(24720088..24720226), FT complement(24716376..24716552), FT complement(24714546..24714668),AL031775.1:5119..5253, FT AL031775.1:7768..7934) FT /gene="C6orf62" FT /locus_tag="RP1-30M3.4-003" FT /product="chromosome 6 open reading frame 62" FT /note="match: ESTs: Em:BG342500.1 Em:BG692520.1 FT Em:BG803992.1" FT mRNA join(24742530..24742574,24749224..24749376, FT 24751793..24752149) FT /locus_tag="RP3-369A17.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:DA142060.1" FT mRNA join(24749295..24749376,24751791..24751917) FT /locus_tag="RP3-369A17.4-002" FT /product="novel transcript" FT /note="match: ESTs: Em:EG327501.1" FT CDS complement(join(24750900..24751093,24751487..24751852)) FT /pseudo FT /locus_tag="RP3-369A17.2-001" FT /product="adaptor-related protein complex 3, sigma 1 FT subunit (AP3S1) pseudogene" FT /note="match: proteins: Sw:P47064 Sw:P61967 Sw:P81294 FT Sw:Q09905 Sw:Q62523 Sw:Q8BSZ2 Sw:Q92572 Sw:Q9DCR2 Sw:Q9Y7L6 FT Tr:O23685 Tr:O82201 Tr:Q29216" FT mRNA join(24775168..24775472,24777450..24777525, FT 24780891..24780968,24781705..24781849,24784315..24784397, FT 24784672..24784782,24785866..24786327) FT /gene="GMNN" FT /locus_tag="RP3-369A17.3-001" FT /product="geminin, DNA replication inhibitor" FT /note="match: ESTs: Em:AA295726 Em:AL518006 Em:AL525229 FT Em:AL558330 Em:AV734302 Em:BE730477 Em:BF027791 Em:BF132781 FT Em:BF215019 Em:BF700297 Em:BF701234 Em:BF921728 Em:BF967209 FT Em:BF977182 Em:BG180421 Em:BG495533 Em:BG505022 Em:BG530534 FT Em:BG678947 Em:BG687171 Em:BG776218 Em:BG778341 Em:BG825264 FT Em:BI093913 Em:BI459527 Em:BI667507 Em:BI830428 FT Em:BI857913" FT /note="match: cDNAs: Em:BC005185.1 Em:BC005389.1" FT mRNA join(24775168..24775340,24777450..24777525, FT 24780891..24780968,24781705..24781849,24784315..24784397, FT 24784672..24784782,24785866..24786327) FT /gene="GMNN" FT /locus_tag="RP3-369A17.3-002" FT /product="geminin, DNA replication inhibitor" FT /note="match: ESTs: Em:AA311594 Em:AL522354 Em:AU118695 FT Em:AV689368 Em:AV734242 Em:AV756510 Em:BE564333 Em:BE565866 FT Em:BE893489 Em:BE910343 Em:BF029154 Em:BF240393 Em:BF248391 FT Em:BF570966 Em:BF666338 Em:BF666672 Em:BF667576 Em:BF696555 FT Em:BF699912 Em:BG117581 Em:BG612435 Em:BG612964 Em:BG776051 FT Em:BG776192 Em:BG777305 Em:BI759810" FT /note="match: cDNAs: Em:AK021685.1" FT mRNA join(24775641..24775730,24777450..24777525, FT 24780891..24780968,24781705..24781849,24784315..24784397, FT 24784672..24784782,24785866..24786327) FT /gene="GMNN" FT /locus_tag="RP3-369A17.3-003" FT /product="geminin, DNA replication inhibitor" FT /note="match: ESTs: Em:AA393139 Em:BG777134" FT CDS join(24777487..24777525,24780891..24780968, FT 24781705..24781849,24784315..24784397,24784672..24784782, FT 24785866..24786027) FT /gene="GMNN" FT /locus_tag="RP3-369A17.3-001" FT /standard_name="OTTHUMP00000016095" FT /product="geminin, DNA replication inhibitor" FT /note="match: proteins: Sw:O75496 Sw:O88513 Tr:O93352 FT Tr:O93355" FT /protein_id="CAC21511.1" FT /translation="MKQKQEEIKENIKNSSVPRRTLKMIQPSASGSLVGRENELSAGLS FT KRKHRNDHLTSTTSSPGVIVPESSENKNLGGVTQESFDLMIKENPSSQYWKEVAEKRRK FT ALYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQYMAELIERLNGEPLDNFE FT SLDNQEFDSEEETVEDSLVEDSEIGTCAEGTVSSSTDAKPCI" FT polyA_signal 24786255..24786260 FT polyA_site 24786278 FT polyA_site 24786327 FT misc_feature 24797877 FT /note="Clone_right_end: RP3-369A17" FT misc_feature 24797978..24868677 FT /note="annotated region of clone" FT polyA_signal complement(24804534..24804539) FT mRNA complement(join(24828367..24828523,24830737..24830898, FT 24832484..24832619,24835931..24836278)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-004" FT /product="family with sequence similarity 65, member B" FT /note="match: ESTs: Em:BF348132" FT mRNA complement(join(24840500..24841003,24843090..24843364)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-003" FT /product="family with sequence similarity 65, member B" FT /note="match: ESTs: Em:AW854279 Em:BF574262 Em:BG768049" FT mRNA join(AL078584.17:62153..62302,AL078584.17:97303..97429, FT AL078584.17:99321..99476,AL078584.17:100161..100239, FT AL078584.17:102231..102254,AL078584.17:103973..104026, FT complement(24865529..24865678), FT complement(24861201..24861264), FT complement(24852803..24852846), FT complement(24850825..24850950), FT complement(24850030..24850178), FT complement(24848253..24848382), FT complement(24847770..24847919), FT complement(24843090..24843782), FT complement(24839319..24839500), FT complement(24835931..24836099), FT complement(24832484..24832619), FT complement(24830737..24830898), FT complement(24828365..24828523), FT complement(24825454..24825656), FT complement(24818770..24818853), FT complement(24809945..24810035), FT complement(24804513..24806701)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-001" FT /product="family with sequence similarity 65, member B" FT /note="match: cDNAs: Em:AB002384.1" FT /note="match: ESTs: Em:BB633088 Em:BB641110 Em:BE247350 FT Em:BG699523 Em:BG898167" FT misc_feature 24868478 FT /note="Clone_left_end: RP1-245M18" FT mRNA join(AL078584.17:95765..96169,AL078584.17:97303..97429, FT AL078584.17:99321..99476,AL078584.17:100161..100239, FT AL078584.17:102231..102254,AL078584.17:103973..104026, FT complement(24865529..24865678), FT complement(24861201..24861264), FT complement(24852803..24852846), FT complement(24850825..24850950), FT complement(24850030..24850178), FT complement(24848253..24848382), FT complement(24843090..24843782), FT complement(24839587..24839827)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-002" FT /product="family with sequence similarity 65, member B" FT /note="match: cDNAs: Em:BC000930.1 Em:BC000930.2 FT Em:BC001232.1 Em:U49187.1" FT /note="match: ESTs: Em:AL544377 Em:AW429771 Em:AW435673 FT Em:BE031066 Em:BE542803 Em:BG623356" FT CDS join(AL078584.17:97329..97429,AL078584.17:99321..99476, FT AL078584.17:100161..100239,AL078584.17:102231..102254, FT AL078584.17:103973..104026,complement(24865529..24865678), FT complement(24861201..24861264), FT complement(24852803..24852846), FT complement(24850825..24850950), FT complement(24850030..24850178), FT complement(24848253..24848382), FT complement(24847770..24847919), FT complement(24843090..24843782), FT complement(24839319..24839500), FT complement(24835931..24836099), FT complement(24832484..24832619), FT complement(24830737..24830898), FT complement(24828365..24828523), FT complement(24825454..24825656), FT complement(24818770..24818853), FT complement(24809945..24810035), FT complement(24806601..24806701)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-001" FT /standard_name="OTTHUMP00000016104" FT /product="family with sequence similarity 65, member B" FT /note="match: proteins: Tr:Q9BQ28 Tr:Q9Y4F9" FT /protein_id="CAH73086.2" FT /translation="MLVGSQSFSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIENSSAL FT KKPQAKLKKMHNLGHKNNNPPKEPQPKRVEEVYRALKNGLDEYLEVHQTELDKLTAQLK FT DMKRNSRLGVLYDLDKQIKTIERYMRRLEFHISKVDELYEAYCIQRRLQDGASKMKQAF FT ATSPASKAARESLTEINRSFKEYTENMCTIEVELENLLGEFSIKMKGLAGFARLCPGDQ FT YEIFMKYGRQRWKLKGKIEVNGKQSWDGEETVFLPLIVGFISIKVTELKGLATHILVGS FT VTCETKELFAARPQVVAVDINDLGTIKLNLEITWYPFDVEDMTASSGAGNKAAALQRRM FT SMYSQGTPETPTFKDHSFFRWLHPSPDKPRRLSVLSALQDTFFAKLHRSRSFSDLPSLR FT PSPKAVLELYSNLPDDIFENGKAAEEKMPLSLSFSDLPNGDCALTSHSTGSPSNSTNPE FT ITITPAEFNLSSLASQNEGMDDTSSASSRNSLGEGQEPKSHLKEEDPEEPRKPASAPSE FT ACRRQSSGAGAEHLFLENDVAEALLQESEEASELKPVELDTSEGNITKQLVKRLTSAEV FT PMATDRLLSEGSVGGESEGCRSFLDGSLEDAFNGLLLALEPHKEQYKEFQDLNQEVMNL FT DDILKCKPAVSRSRSSSLSLTVESALESFDFLNTSDFDEEEDGDEVCNVGGGADSVFSD FT TETEKHSYRSVHPEARGHLSEALTEDTGVGTSVAGSPLPLTTGNESLDITIVRHLQYCT FT QLVQQIVFSSKTPFVARSLLEKLSRQIQVMEKLAAVSDENIGNISSVVEAIPEFHKKLS FT LLSFWTKCCSPVGVYHSPADRVMKQLEASFARTVNKEYPGLADPVFRTLVSQILDRAEP FT LLSSSLSSEVVTVFQYYSYFTSHGVSDLESYLSQLARQVSMVQTLQSLRDEKLLQTMSD FT LAPSNLLAQQEVLRTLALLLTREDNEVSEAVTLYLAAASKNQHFREKALLYYCEALTKT FT NLQLQKAACLALKILEATESIKMLVTLCQSDTEEIRNVASETLLSLGEDGRLAYEQLDK FT FPRDCVKVGGRHGTEVATAF" FT CDS join(AL078584.17:97329..97429,AL078584.17:99321..99476, FT AL078584.17:100161..100239,AL078584.17:102231..102254, FT AL078584.17:103973..104026,complement(24865529..24865678), FT complement(24861201..24861264), FT complement(24852803..24852846), FT complement(24850825..24850950), FT complement(24850030..24850178), FT complement(24848253..24848382), FT complement(24843090..24843782), FT complement(24839822..24839827)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-002" FT /standard_name="OTTHUMP00000016105" FT /product="family with sequence similarity 65, member B" FT /note="match: proteins: Sw:Q96MK2 Tr:Q13529" FT /protein_id="CAH73087.2" FT /translation="MLVGSQSFSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIENSSAL FT KKPQAKLKKMHNLGHKNNNPPKEPQPKRVEEVYRALKNGLDEYLEVHQTELDKLTAQLK FT DMKRNSRLGVLYDLDKQIKTIERYMRRLEFHISKVDELYEAYCIQRRLQDGASKMKQAF FT ATSPASKAARESLTEINRSFKEYTENMCTIEVELENLLGEFSIKMKGLAGFARLCPGDQ FT YEIFMKYGRQRWKLKGKIEVNGKQSWDGEETVFLPLIVGFISIKVTELKGLATHILVGS FT VTCETKELFAARPQVVAVDINDLGTIKLNLEITWYPFDVEDMTASSGAGNKAAALQRRM FT SMYSQGTPETPTFKDHSFFSNLPDDIFENGKAAEEKMPLSLSFSDLPNGDCALTSHSTG FT SPSNSTNPEITITPAEFNLSSLASQNEGMDDTSSASSRNSLGEGQEPKSHLKEEDPEEP FT RKPASAPSEACRRQSSGAGAEHLFLENDVAEALLQESEEASELKPVELDTSEGNITKQL FT VKRLTSAEVPMATDRLLSEGSVGGESEGCRSFLDGSLEDAFNGLLLALEPHKEQYKEFQ FT DLNQEVMNLDDILKK" FT misc_feature complement(24868678..24973347) FT /note="annotated region of clone" FT CDS <24948108..>24948572 FT /pseudo FT /locus_tag="RP1-245M18.2-001" FT /product="cytochrome c oxidase polypeptide II pseudogene" FT /note="match: proteins: Sw:O03851 Sw:P24986 Sw:P24988 FT Sw:P29875 Sw:P41294 Sw:P50673 Sw:P98043 Sw:P98046 Sw:P98049 FT Sw:Q37684 Sw:Q96190 Tr:Q37754 Tr:Q94NT6 Tr:Q94RN4 Tr:Q958G3 FT Tr:Q958G6 Tr:Q958G9 Tr:Q958H1 Tr:Q9GA27 Tr:Q9GAG7 Tr:Q9GAH1 FT Tr:Q9MJB3 Tr:Q9MNZ0 Tr:Q9MNZ2 Tr:Q9MNZ4 Tr:Q9MP18 Tr:Q9TDR9 FT Tr:Q9XMI8 Tr:Q9ZZM1" FT misc_feature complement(24914066..24914973) FT /note="Tandem repeat. Region contains forced join and FT single clone. Restriction digest data suggests there is FT approximately 200bp missing" FT mRNA complement(join(AL512428.13:6636..8824, FT AL512428.13:12068..12158,AL512428.13:20893..20976, FT AL512428.13:27577..27779,AL512428.13:30488..30646, FT AL512428.13:32860..33021,AL512428.13:34607..34742, FT AL512428.13:38054..38222,AL512428.13:41442..41623, FT AL512428.13:45213..45905,AL512428.13:49893..50042, FT AL512428.13:50376..50505,AL512428.13:52153..52301, FT AL512428.13:52948..53073,AL512428.13:54926..54969, FT AL512428.13:63324..63387,AL512428.13:67652..67801, FT 24869322..24869375,24871094..24871117,24873109..24873187, FT 24873872..24874027,24875919..24876045,24911046..24911195)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-001" FT /product="family with sequence similarity 65, member B" FT /note="match: cDNAs: Em:AB002384.1" FT /note="match: ESTs: Em:BB633088 Em:BB641110 Em:BE247350 FT Em:BG699523 Em:BG898167" FT mRNA complement(join(AL512428.13:41710..41950, FT AL512428.13:45213..45905,AL512428.13:50376..50505, FT AL512428.13:52153..52301,AL512428.13:52948..53073, FT AL512428.13:54926..54969,AL512428.13:63324..63387, FT AL512428.13:67652..67801,24869322..24869375, FT 24871094..24871117,24873109..24873187,24873872..24874027, FT 24875919..24876045,24877179..24877583)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-002" FT /product="family with sequence similarity 65, member B" FT /note="match: cDNAs: Em:BC000930.1 Em:BC000930.2 FT Em:BC001232.1 Em:U49187.1" FT /note="match: ESTs: Em:AL544377 Em:AW429771 Em:AW435673 FT Em:BE031066 Em:BE542803 Em:BG623356" FT CDS complement(join(AL512428.13:8724..8824, FT AL512428.13:12068..12158,AL512428.13:20893..20976, FT AL512428.13:27577..27779,AL512428.13:30488..30646, FT AL512428.13:32860..33021,AL512428.13:34607..34742, FT AL512428.13:38054..38222,AL512428.13:41442..41623, FT AL512428.13:45213..45905,AL512428.13:49893..50042, FT AL512428.13:50376..50505,AL512428.13:52153..52301, FT AL512428.13:52948..53073,AL512428.13:54926..54969, FT AL512428.13:63324..63387,AL512428.13:67652..67801, FT 24869322..24869375,24871094..24871117,24873109..24873187, FT 24873872..24874027,24875919..24876019)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-001" FT /standard_name="OTTHUMP00000016104" FT /product="family with sequence similarity 65, member B" FT /note="match: proteins: Tr:Q9BQ28 Tr:Q9Y4F9" FT /protein_id="CAI19934.2" FT /translation="MLVGSQSFSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIENSSAL FT KKPQAKLKKMHNLGHKNNNPPKEPQPKRVEEVYRALKNGLDEYLEVHQTELDKLTAQLK FT DMKRNSRLGVLYDLDKQIKTIERYMRRLEFHISKVDELYEAYCIQRRLQDGASKMKQAF FT ATSPASKAARESLTEINRSFKEYTENMCTIEVELENLLGEFSIKMKGLAGFARLCPGDQ FT YEIFMKYGRQRWKLKGKIEVNGKQSWDGEETVFLPLIVGFISIKVTELKGLATHILVGS FT VTCETKELFAARPQVVAVDINDLGTIKLNLEITWYPFDVEDMTASSGAGNKAAALQRRM FT SMYSQGTPETPTFKDHSFFRWLHPSPDKPRRLSVLSALQDTFFAKLHRSRSFSDLPSLR FT PSPKAVLELYSNLPDDIFENGKAAEEKMPLSLSFSDLPNGDCALTSHSTGSPSNSTNPE FT ITITPAEFNLSSLASQNEGMDDTSSASSRNSLGEGQEPKSHLKEEDPEEPRKPASAPSE FT ACRRQSSGAGAEHLFLENDVAEALLQESEEASELKPVELDTSEGNITKQLVKRLTSAEV FT PMATDRLLSEGSVGGESEGCRSFLDGSLEDAFNGLLLALEPHKEQYKEFQDLNQEVMNL FT DDILKCKPAVSRSRSSSLSLTVESALESFDFLNTSDFDEEEDGDEVCNVGGGADSVFSD FT TETEKHSYRSVHPEARGHLSEALTEDTGVGTSVAGSPLPLTTGNESLDITIVRHLQYCT FT QLVQQIVFSSKTPFVARSLLEKLSRQIQVMEKLAAVSDENIGNISSVVEAIPEFHKKLS FT LLSFWTKCCSPVGVYHSPADRVMKQLEASFARTVNKEYPGLADPVFRTLVSQILDRAEP FT LLSSSLSSEVVTVFQYYSYFTSHGVSDLESYLSQLARQVSMVQTLQSLRDEKLLQTMSD FT LAPSNLLAQQEVLRTLALLLTREDNEVSEAVTLYLAAASKNQHFREKALLYYCEALTKT FT NLQLQKAACLALKILEATESIKMLVTLCQSDTEEIRNVASETLLSLGEDGRLAYEQLDK FT FPRDCVKVGGRHGTEVATAF" FT CDS complement(join(AL512428.13:41945..41950, FT AL512428.13:45213..45905,AL512428.13:50376..50505, FT AL512428.13:52153..52301,AL512428.13:52948..53073, FT AL512428.13:54926..54969,AL512428.13:63324..63387, FT AL512428.13:67652..67801,24869322..24869375, FT 24871094..24871117,24873109..24873187,24873872..24874027, FT 24875919..24876019)) FT /gene="FAM65B" FT /locus_tag="RP11-373L11.1-002" FT /standard_name="OTTHUMP00000016105" FT /product="family with sequence similarity 65, member B" FT /note="match: proteins: Sw:Q96MK2 Tr:Q13529" FT /protein_id="CAI19935.2" FT /translation="MLVGSQSFSPGGPNGIIRSQSFAGFSGLQERRSRCNSFIENSSAL FT KKPQAKLKKMHNLGHKNNNPPKEPQPKRVEEVYRALKNGLDEYLEVHQTELDKLTAQLK FT DMKRNSRLGVLYDLDKQIKTIERYMRRLEFHISKVDELYEAYCIQRRLQDGASKMKQAF FT ATSPASKAARESLTEINRSFKEYTENMCTIEVELENLLGEFSIKMKGLAGFARLCPGDQ FT YEIFMKYGRQRWKLKGKIEVNGKQSWDGEETVFLPLIVGFISIKVTELKGLATHILVGS FT VTCETKELFAARPQVVAVDINDLGTIKLNLEITWYPFDVEDMTASSGAGNKAAALQRRM FT SMYSQGTPETPTFKDHSFFSNLPDDIFENGKAAEEKMPLSLSFSDLPNGDCALTSHSTG FT SPSNSTNPEITITPAEFNLSSLASQNEGMDDTSSASSRNSLGEGQEPKSHLKEEDPEEP FT RKPASAPSEACRRQSSGAGAEHLFLENDVAEALLQESEEASELKPVELDTSEGNITKQL FT VKRLTSAEVPMATDRLLSEGSVGGESEGCRSFLDGSLEDAFNGLLLALEPHKEQYKEFQ FT DLNQEVMNLDDILKK" FT misc_feature complement(24868678) FT /note="Clone_left_end: RP1-245M18" FT misc_feature 24973348..25031655 FT /note="annotated region of clone" FT CDS 24976646..24977204 FT /pseudo FT /locus_tag="RP11-367G6.1-001" FT /product="peptidylprolyl isomerase A (cyclophilin A) (PPIA) FT pseudogene" FT /note="match: proteins: Sw:P14851 Sw:P17742 Sw:P29117 FT Sw:P52009 Sw:P54985 Sw:P62936 Sw:P62941 Sw:P62941 Sw:P62941 FT Sw:P91791 Sw:Q38867 Sw:Q39613 Sw:Q99KR7 Sw:Q9TTC6 Tr:O44098 FT Tr:O93970 Tr:Q41119 Tr:Q9CZK9 Tr:Q9MZD3 Tr:Q9VUD6 Tr:Q9XZZ5 FT Tr:Q9Y536" FT CDS complement(25023520..25024688) FT /pseudo FT /locus_tag="RP11-367G6.2-001" FT /product="argininosuccinate synthetase (ASS) pseudogene" FT /note="match: proteins: Sw:O94354 Sw:O97069 Sw:P00966 FT Sw:P09034 Sw:P14568 Sw:P16460 Sw:P16460 Sw:P22768 Sw:Q8UC31 FT Sw:Q8UC31 Sw:Q8XMJ7 Sw:Q8YEK8 Sw:Q8YMX6 Sw:Q92L73 Sw:Q97KE6 FT Sw:Q98E81 Sw:Q9ABU1 Sw:Q9HY84 Sw:Q9K820 Sw:Q9RWJ4 Sw:Q9SZX3 FT Sw:Q9X2A1" FT misc_feature 25031456 FT /note="Clone_left_end: RP3-425P12" FT misc_feature 25031656..25142349 FT /note="annotated region of clone" FT mRNA join(25042067..25042144,25055191..25055343, FT 25056547..25056892) FT /locus_tag="RP3-425P12.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI342503" FT polyA_site complement(25053855) FT polyA_signal complement(25053869..25053874) FT mRNA complement(join(<25109730..25109809,25110184..25110331, FT 25113820..25114010,25115219..25115328,25137848..25138051, FT AL590084.9:24269..24534)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-007" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:AL558196 Em:AL558196.1 Em:AV757536 FT Em:AV757536.1 Em:BM926468.1" FT polyA_signal 25056861..25056866 FT mRNA complement(join(25053855..25054082,25054228..25054273, FT 25054684..25054777,25057240..25057301)) FT /locus_tag="RP3-425P12.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI217897" FT polyA_site complement(25061854) FT mRNA complement(join(25061853..25062108,25062701..25062888, FT 25063708..25063735)) FT /locus_tag="RP3-425P12.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA922143 Em:AW779148" FT misc_feature 25070659 FT /note="Tandem repeat. Forced join. Gap size estimates FT inconsistent due to deletions in subclones and differences FT between restriction digest data from this clone and the FT overlapping clone bA367G6 (AL160400). Restriction digest FT data suggest the gap is in the region of 1.3kb to 2.7kb" FT polyA_site complement(25081296) FT polyA_signal complement(25081315..25081320) FT polyA_site complement(25081354) FT polyA_signal complement(25081368..25081373) FT mRNA complement(join(25081640..25082107,25084708..25085013)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-009" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:BG535836" FT misc_feature 25086577 FT /note="Clone_right_end: RP11-367G6" FT mRNA complement(join(25082031..25082107,25084708..25084804, FT 25084881..25085060,25087012..25087127,25093742..25093916, FT 25097289..25097429,25106587..25106678)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-004" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:BI753737" FT mRNA complement(join(25081295..25082107,25084708..25084804, FT 25087012..25087127,25092124..25092240,25093742..25093916, FT 25097289..25097429,25106587..25106722,25108804..25108941, FT 25109728..25109809,25110184..25110331,25113820..25114010, FT 25115219..25115328,25137848..25138051, FT AL590084.9:24269..24328,AL590084.9:76330..76449)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-001" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:AL044205 Em:AL558196 Em:AV757536 FT Em:BB635730 Em:BE541781 Em:BG536615 Em:BG563437 Em:BI537553 FT Em:BI537590 Em:BM446188 Em:R21160" FT /note="match: cDNAs: Em:AK000716.1 Em:BC003406.1 FT Em:D86324.1" FT mRNA complement(join(25086845..25087127,25092124..25092240, FT 25093742..25093916,25097289..25097429,25106587..25106722, FT 25108804..25108910)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-008" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:AL564559" FT mRNA complement(join(25106040..25106757,25108804..25108941, FT 25109728..25109754)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-003" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:AA287310 Em:AL583054" FT CDS complement(join(25081824..25081886,25084708..25084804, FT 25087012..25087127,25092124..25092240,25093742..25093916, FT 25097289..25097429,25106587..25106722,25108804..25108941, FT 25109728..25109809,25110184..25110331,25113820..25114010, FT 25115219..25115320)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-002" FT /standard_name="OTTHUMP00000017711" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /protein_id="CAI20561.1" FT /translation="MDENNGLLLLELNPPNPWDLQPRSPEELAFGEVQITYLTHACMDL FT KLGDKRMVFDPWLIGPAFARGWWLLHEPPSDWLERLCQADLIYISHLHSDHLSYPTLKK FT LAGRRPDIPIYVGNTERPVFWNLNQSGVQLTNINVVPFGIWQQVDKNLRFMILMDGVHP FT EMDTCIIVEYKGHKILNIVDCTRPNGGRLPMKVALMMSDFAGGASGFPMTFSGGKFTEE FT WKAQFIKTERKKLLNYKARLVKNLQPRIYCPFAGYFVESHPSDKYIKETNTKNDPNELN FT NLIKKNSDVITWTPRPGATLDLGRMLKDRTDSKGIIEPPEGTKIYKDSWDFEPYLEILN FT AALGDEIFLHSSWIKEYFTWAGFKDYNLVVRMIETDEDFNPFPGGYDYLVDFLDLSFPK FT ERPQREHPYEEIHSRVDVIRHVVKNGLLWDELYIGFQTRLQRDPDIYHHLFWNHFQIKL FT PLTPPNWKSFLMCCEQNGPVILQFSTERTNEPNRNKFSVENKA" FT CDS complement(join(25082090..25082107,25084708..25084804, FT 25087012..25087127,25092124..25092240,25093742..25093916, FT 25097289..25097429,25106587..25106722,25108804..25108941, FT 25109728..25109809,25110184..25110331,25113820..25114010, FT 25115219..25115320)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-001" FT /standard_name="OTTHUMP00000017710" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: proteins: Sw:O97598 Sw:Q9TUJ2 Sw:Q9Y471" FT /protein_id="CAI20562.1" FT /translation="MDENNGLLLLELNPPNPWDLQPRSPEELAFGEVQITYLTHACMDL FT KLGDKRMVFDPWLIGPAFARGWWLLHEPPSDWLERLCQADLIYISHLHSDHLSYPTLKK FT LAGRRPDIPIYVGNTERPVFWNLNQSGVQLTNINVVPFGIWQQVDKNLRFMILMDGVHP FT EMDTCIIVEYKGHKILNIVDCTRPNGGRLPMKVALMMSDFAGGASGFPMTFSGGKFTEE FT WKAQFIKTERKKLLNYKARLVKNLQPRIYCPFAGYFVESHPSDKYIKETNTKNDPNELN FT NLIKKNSDVITWTPRPGATLDLGRMLKDRTDSKGIIEPPEGTKIYKDSWDFEPYLEILN FT AALGDEIFLHSSWIKEYFTWAGFKDYNLVVRMIETDEDFNPFPGGYDYLVDFLDLSFPK FT ERPQREHPYEEIHSRVDVIRHVVKNGLLWDELYIGFQTRLQRDPDIYHHLFWNHFQIKL FT PLTPPNWKSFLMCCEQNGPVILQECKTT" FT CDS complement(join(<25108804..25108941,25109728..25109809, FT 25110184..25110331,25113820..25114010,25115219..25115320)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-006" FT /standard_name="OTTHUMP00000017712" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /protein_id="CAI20563.1" FT /translation="MDENNGLLLLELNPPNPWDLQPRSPEELAFGEVQITYLTHACMDL FT KLGDKRMVFDPWLIGPAFARGWWLLHEPPSDWLERLCQADLIYISHLHSDHLSYPTLKK FT LAGRRPDIPIYVGNTERPVFWNLNQSGVQLTNINVVPFGIWQQVDKNLRFMILMDGVHP FT EMDTCIIVEYKGHKILNIVDCTRPNGGRLPMKVALMMSDFAGGASGFPMTFSGGKFT" FT CDS complement(join(<25109730..25109809,25110184..25110331, FT 25113820..25114010,25115219..25115320)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-007" FT /standard_name="OTTHUMP00000017713" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /protein_id="CAI20564.1" FT /translation="MDENNGLLLLELNPPNPWDLQPRSPEELAFGEVQITYLTHACMDL FT KLGDKRMVFDPWLIGPAFARGWWLLHEPPSDWLERLCQADLIYISHLHSDHLSYPTLKK FT LAGRRPDIPIYVGNTERPVFWNLNQSGVQLTNINVVPFGIWQQVDKNLRFMILMDGVHP FT EMDTCIIVEY" FT mRNA complement(join(25081634..25081886,25084708..25084804, FT 25087012..25087127,25092124..25092240,25093742..25093916, FT 25097289..25097429,25106587..25106722,25108804..25108941, FT 25109728..25109809,25110184..25110331,25113820..25114010, FT 25115219..25115328,25137848..25138051,25138302..25138821)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-002" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:BF243571 Em:BM455523" FT /note="match: cDNAs: Em:AF074480.1" FT mRNA complement(join(25127774..25128085,25137848..25138051, FT 25138302..25138557)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-005" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:BG539938" FT mRNA complement(join(<25108804..25108941,25109728..25109809, FT 25110184..25110331,25113820..25114010,25115219..25115328, FT 25137848..25138051,25138754..25138801)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-006" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:BF243571 Em:BM455523" FT CDS 25140231..25141631 FT /pseudo FT /locus_tag="RP3-425P12.4-001" FT /product="nucleoporin 50kD (NUP50) pseudogene" FT /note="match: proteins: Sw:O08587.2 Sw:Q9JIH2.1 Sw:Q9UKX7.2 FT Tr:Q4R414.1 Tr:Q8N6V5.1" FT misc_feature 25142249 FT /note="Clone_right_end: RP3-425P12" FT misc_feature 25142350..25236788 FT /note="annotated region of clone" FT CDS 25152774..25153746 FT /pseudo FT /locus_tag="RP11-191A15.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q8VCF1 Sw:Q8VCF1 Sw:Q8VCF1 FT Sw:Q8WVQ1" FT CDS 25152775..25153747 FT /pseudo FT /locus_tag="RP11-191A15.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:O96559 Sw:Q8VCF1 Sw:Q8VCF1 FT Sw:Q8VCF1 Sw:Q8WVQ1 Tr:Q9VGN8" FT mRNA complement(join(AL133268.15:<78175..78254, FT AL133268.15:78629..78776,AL133268.15:82265..82455, FT AL133268.15:83664..83773,AL133268.15:106293..106496, FT 25166518..25166783)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-007" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:AL558196 Em:AL558196.1 Em:AV757536 FT Em:AV757536.1 Em:BM926468.1" FT CDS 25181532..25181952 FT /pseudo FT /locus_tag="RP11-191A15.2-001" FT /product="ubiquitin-conjugating enzyme E2D 3 (UBC4/5 FT homolog, yeast) (UBE2D3) pseudogene" FT /note="match: proteins: Sw:O74196 Sw:P25867 Sw:P25867 FT Sw:P35129 Sw:P61077 Sw:P61078 Sw:P62840 Sw:P70711 Sw:Q9UVR2 FT Tr:P61078 Tr:P61079 Tr:P62838 Tr:Q42897 Tr:Q94F47 Tr:Q9D1S1 FT Tr:Q9D7F5 Tr:Q9FKT3 Tr:Q9NTT1 Tr:Q9SPF9 Tr:Q9Y2X8 FT Tr:Q9ZTZ8" FT mRNA complement(join(AL133268.15:49740..50552, FT AL133268.15:53153..53249,AL133268.15:55457..55572, FT AL133268.15:60569..60685,AL133268.15:62187..62361, FT AL133268.15:65734..65874,AL133268.15:75032..75167, FT AL133268.15:77249..77386,AL133268.15:78173..78254, FT AL133268.15:78629..78776,AL133268.15:82265..82455, FT AL133268.15:83664..83773,AL133268.15:106293..106496, FT 25166518..25166577,25218579..25218698)) FT /gene="CMAH" FT /locus_tag="RP3-425P12.3-001" FT /product="cytidine monophosphate-N-acetylneuraminic acid FT hydroxylase (CMP-N-acetylneuraminate monooxygenase) FT pseudogene" FT /note="match: ESTs: Em:AL044205 Em:AL558196 Em:AV757536 FT Em:BB635730 Em:BE541781 Em:BG536615 Em:BG563437 Em:BI537553 FT Em:BI537590 Em:BM446188 Em:R21160" FT /note="match: cDNAs: Em:AK000716.1 Em:BC003406.1 FT Em:D86324.1" FT CDS join(25218916..25219260,25219576..25219712, FT 25219904..25220104,25220203..25220759,25220920..25221299) FT /pseudo FT /locus_tag="RP11-191A15.4-001" FT /product="aryl hydrocarbon receptor (AHR) pseudogene" FT /note="match: proteins: Sw:O02747 Sw:P30561 Sw:P30561 FT Sw:P30561 Sw:P35869 Sw:P35869 Sw:P41738 Sw:P41738 Sw:P41738 FT Sw:Q95LD9 Tr:Q923K8 Tr:Q95M15 Tr:Q9JHY9 Tr:Q9JJK7 FT Tr:Q9PTI7" FT misc_feature 25236589 FT /note="Clone_left_end: RP3-522P13" FT misc_feature 25236789..25386712 FT /note="annotated region of clone" FT mRNA complement(join(25245583..25245692,25255416..25255533, FT 25260575..25260803,25261351..25261639)) FT /locus_tag="RP3-522P13.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI562348" FT CDS 25261467..25261948 FT /pseudo FT /locus_tag="RP3-522P13.1-001" FT /product="60S Ribosomal Protein L21 (RPL21) pseudogene" FT /note="match: proteins: Em:16 Em:BAB29696 Sw:O09167 FT Sw:P46778 Sw:P49667 Sw:Q9UUC1 Tr:O75868 Tr:Q9I9W4 FT Tr:Q9SEN0" FT CDS complement(join(25272429..25272934,25273241..25273327, FT 25273654..25273976)) FT /pseudo FT /locus_tag="RP3-522P13.2-001" FT /product="heterogeneous nuclear ribonucleoprotein A3 FT (HNRPA3) pseudogene" FT /note="match: proteins: PH-20 Sw:P17130 Sw:P49312 Sw:P51968 FT Sw:P51991 Sw:P51992 Sw:Q28521 Tr:P09651 Tr:P49312 FT Tr:Q9JHW3" FT mRNA join(25279306..25279467,25285040..25285137, FT AL160037.17:33730..33780,AL160037.17:40117..40176, FT AL160037.17:49099..49220,AL160037.17:63514..63611, FT AL160037.17:63955..64025,AL160037.17:64254..64327, FT AL160037.17:65660..66213) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-005" FT /product="leucine rich repeat containing 16" FT /note="match: cDNAs: Em:BC040903.1" FT mRNA join(25279467..25279964,25285040..25285139) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-004" FT /product="leucine rich repeat containing 16" FT /note="match: ESTs: Em:BM563448" FT mRNA join(25279656..25280063,25285040..25285137, FT AL160037.17:33730..33780,AL160037.17:40117..40176, FT AL160037.17:49099..49220,AL160037.17:63514..63611, FT AL160037.17:63955..64025,AL160037.17:64254..64327, FT AL160037.17:79489..79564,AL160037.17:84785..84873, FT AL160037.17:86043..86137,AL160037.17:95873..95959, FT AL160037.17:102098..102201,AL160037.17:105348..105425, FT AL160037.17:105564..105640,AL160037.17:108727..108831, FT AL160037.17:113782..113851,AL160037.17:123272..123353, FT AL160037.17:124123..124222,AL160037.17:124324..124378, FT AL160037.17:129291..129463,AL160037.17:130963..131031, FT AL160037.17:133860..133953,AL022170.1:6797..6895, FT AL022170.1:15857..15985,AL022170.1:17949..18080, FT AL022170.1:28912..29087,AL022170.1:32011..32098, FT AL022170.1:34703..34852,AL022170.1:58926..58992, FT AL022170.1:59245..59441,AL022170.1:72417..72529, FT AL022170.1:78316..78748,AL022170.1:82814..82895, FT AL022170.1:84063..84275,AL022170.1:88052..88183, FT AL022170.1:97449..98532) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-001" FT /product="leucine rich repeat containing 16" FT /note="match: ESTs: Em:BM978535.1 Em:BM979059.1 FT Em:BM998880.1 Em:BP222923.1 Em:BQ423885.1 Em:CA313722.1 FT Em:CV330537.1" FT /note="match: cDNAs: Em:AK000055.1 Em:AK049059.1 FT Em:AK125696.1" FT CDS join(25280024..25280063,25285040..25285137, FT AL160037.17:33730..33780,AL160037.17:40117..40176, FT AL160037.17:49099..49220,AL160037.17:63514..63611, FT AL160037.17:63955..64025,AL160037.17:64254..64327, FT AL160037.17:79489..79564,AL160037.17:84785..84873, FT AL160037.17:86043..86137,AL160037.17:95873..95959, FT AL160037.17:102098..102201,AL160037.17:105348..105425, FT AL160037.17:105564..105640,AL160037.17:108727..108831, FT AL160037.17:113782..113851,AL160037.17:123272..123353, FT AL160037.17:124123..124222,AL160037.17:124324..124378, FT AL160037.17:129291..129463,AL160037.17:130963..131031, FT AL160037.17:133860..133953,AL022170.1:6797..6895, FT AL022170.1:15857..15985,AL022170.1:17949..18080, FT AL022170.1:28912..29087,AL022170.1:32011..32098, FT AL022170.1:34703..34852,AL022170.1:58926..58992, FT AL022170.1:59245..59441,AL022170.1:72417..72529, FT AL022170.1:78316..78748,AL022170.1:82814..82895, FT AL022170.1:84063..84275,AL022170.1:88052..88183, FT AL022170.1:97449..97585) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-001" FT /standard_name="OTTHUMP00000016106" FT /product="leucine rich repeat containing 16" FT /note="match: proteins: Tr:Q5VZK9.1" FT /protein_id="CAI21665.1" FT /translation="MTEESSDVPRELIESIKDVIGRKIKISVKKKVKLEVKGDKVENKV FT LVLTSCRAFLVTARIPTKLELTFSYLEIHGVVCSKSAQMIVETEKCSISMKMASPEDVS FT EVLAHIGTCLRKIFPGLSPVRIMKKVSMEPSERLASLQALWDSQTVAEQGPCGGFSQMY FT ACVCDWLGFSYREEVQWDVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTK FT LSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTI FT NLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLV FT HLDLSGNVLRGDDLSHMYNFLAQPNAIVHLDLSNTECSLDMVCGALLRGCLQYLAVLNL FT SRTVFSHRKGKEVPPSFKQFFSSSLALMHINLSGTKLSPEPLKALLLGLACNHNLKGVS FT LDLSNCELRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALG FT KNFNNMKSKNLTPVLDNLVQMIQDEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKV FT DISGNGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIP FT MYDASQALKTNPEKTEDALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRI FT CVKVQDHLNSLRNCGGDAIQEDLKSAERLMRDAKNSKTLLPNLYHVGGASWAGASGLLS FT SPIQETLESMAGEVTRVVDEQLKALLESMVDAAENLCPNVMKKAHIRQDLIHASTEKIS FT IPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDRIVDEILDALSHCHHKLADHFSRR FT GKTLPQQESLEIELAEEKPVKRSIITVEELTEIERLEDLDTCMMTPKSKRKSIHSRMLR FT PVSRAFEMEFDLDKALEEVPIHIEDPPFPSLRQEKRSSGFISELPSEEGKKLEHFTKLR FT PKRNKKQQPTQAAVCAANIVSQDGEQNGLMGRVDEGVDEFFTKKVTKMDSKKWSTRGSE FT SHELNEGGDEKKKRDSRKSSGFLNLIKSRSKSERPPTILMTEEPSSPKGAVRSPPVDCP FT RKDTKAAEHNGNSERIEEIKTPDSFEESQGEEIGKVERSDSKSSPQAGRRYGVQVMGSG FT LLAEMKAKQEKRAACAQKKLGNDAVSQDSSSPALSGVERSDGGGAVPKLHPGLPENRFG FT LGTPEKNTKAEPKAEAGSRSRSSSSTPTSPKPLLQSPKPSLAARPVIPQKPRTASRPDD FT IPDSPSSPKVALLPPVLKKVPSDKERDGQSSPQPSPRTFSQEVSRRSWGQQAQEYQEQK FT QRSSSKDGHQGSKSNDSGEEAEKEFIFV" FT misc_feature 25386713..25522326 FT /note="annotated region of clone" FT mRNA join(AL024509.1:42618..42779,AL024509.1:48352..48449, FT 25420342..25420392,25426729..25426788,25435711..25435832, FT 25450126..25450223,25450567..25450637,25450866..25450939, FT 25452272..25452825) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-005" FT /product="leucine rich repeat containing 16" FT /note="match: cDNAs: Em:BC040903.1" FT mRNA join(AL024509.1:42968..43375,AL024509.1:48352..48449, FT 25420342..25420392,25426729..25426788,25435711..25435832, FT 25450126..25450223,25450567..25450637,25450866..25450939, FT 25466101..25466176,25471397..25471485,25472655..25472749, FT 25482485..25482571,25488710..25488813,25491960..25492037, FT 25492176..25492252,25495339..25495443,25500394..25500463, FT 25509884..25509965,25510735..25510834,25510936..25510990, FT 25515903..25516075,25517575..25517643,25520472..25520565, FT AL022170.1:6797..6895,AL022170.1:15857..15985, FT AL022170.1:17949..18080,AL022170.1:28912..29087, FT AL022170.1:32011..32098,AL022170.1:34703..34852, FT AL022170.1:58926..58992,AL022170.1:59245..59441, FT AL022170.1:72417..72529,AL022170.1:78316..78748, FT AL022170.1:82814..82895,AL022170.1:84063..84275, FT AL022170.1:88052..88183,AL022170.1:97449..98532) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-001" FT /product="leucine rich repeat containing 16" FT /note="match: ESTs: Em:BM978535.1 Em:BM979059.1 FT Em:BM998880.1 Em:BP222923.1 Em:BQ423885.1 Em:CA313722.1 FT Em:CV330537.1" FT /note="match: cDNAs: Em:AK000055.1 Em:AK049059.1 FT Em:AK125696.1" FT CDS join(AL024509.1:43336..43375,AL024509.1:48352..48449, FT 25420342..25420392,25426729..25426788,25435711..25435832, FT 25450126..25450223,25450567..25450637,25450866..25450939, FT 25466101..25466176,25471397..25471485,25472655..25472749, FT 25482485..25482571,25488710..25488813,25491960..25492037, FT 25492176..25492252,25495339..25495443,25500394..25500463, FT 25509884..25509965,25510735..25510834,25510936..25510990, FT 25515903..25516075,25517575..25517643,25520472..25520565, FT AL022170.1:6797..6895,AL022170.1:15857..15985, FT AL022170.1:17949..18080,AL022170.1:28912..29087, FT AL022170.1:32011..32098,AL022170.1:34703..34852, FT AL022170.1:58926..58992,AL022170.1:59245..59441, FT AL022170.1:72417..72529,AL022170.1:78316..78748, FT AL022170.1:82814..82895,AL022170.1:84063..84275, FT AL022170.1:88052..88183,AL022170.1:97449..97585) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-001" FT /standard_name="OTTHUMP00000016106" FT /product="leucine rich repeat containing 16" FT /note="match: proteins: Tr:Q5VZK9.1" FT /protein_id="CAH72024.1" FT /translation="MTEESSDVPRELIESIKDVIGRKIKISVKKKVKLEVKGDKVENKV FT LVLTSCRAFLVTARIPTKLELTFSYLEIHGVVCSKSAQMIVETEKCSISMKMASPEDVS FT EVLAHIGTCLRKIFPGLSPVRIMKKVSMEPSERLASLQALWDSQTVAEQGPCGGFSQMY FT ACVCDWLGFSYREEVQWDVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTK FT LSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTI FT NLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLV FT HLDLSGNVLRGDDLSHMYNFLAQPNAIVHLDLSNTECSLDMVCGALLRGCLQYLAVLNL FT SRTVFSHRKGKEVPPSFKQFFSSSLALMHINLSGTKLSPEPLKALLLGLACNHNLKGVS FT LDLSNCELRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALG FT KNFNNMKSKNLTPVLDNLVQMIQDEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKV FT DISGNGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIP FT MYDASQALKTNPEKTEDALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRI FT CVKVQDHLNSLRNCGGDAIQEDLKSAERLMRDAKNSKTLLPNLYHVGGASWAGASGLLS FT SPIQETLESMAGEVTRVVDEQLKALLESMVDAAENLCPNVMKKAHIRQDLIHASTEKIS FT IPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDRIVDEILDALSHCHHKLADHFSRR FT GKTLPQQESLEIELAEEKPVKRSIITVEELTEIERLEDLDTCMMTPKSKRKSIHSRMLR FT PVSRAFEMEFDLDKALEEVPIHIEDPPFPSLRQEKRSSGFISELPSEEGKKLEHFTKLR FT PKRNKKQQPTQAAVCAANIVSQDGEQNGLMGRVDEGVDEFFTKKVTKMDSKKWSTRGSE FT SHELNEGGDEKKKRDSRKSSGFLNLIKSRSKSERPPTILMTEEPSSPKGAVRSPPVDCP FT RKDTKAAEHNGNSERIEEIKTPDSFEESQGEEIGKVERSDSKSSPQAGRRYGVQVMGSG FT LLAEMKAKQEKRAACAQKKLGNDAVSQDSSSPALSGVERSDGGGAVPKLHPGLPENRFG FT LGTPEKNTKAEPKAEAGSRSRSSSSTPTSPKPLLQSPKPSLAARPVIPQKPRTASRPDD FT IPDSPSSPKVALLPPVLKKVPSDKERDGQSSPQPSPRTFSQEVSRRSWGQQAQEYQEQK FT QRSSSKDGHQGSKSNDSGEEAEKEFIFV" FT misc_feature 25450906 FT /note="Forced join. Gap size estimated to be approximately FT 50bp by restriction digest data" FT misc_feature 25450907..25451041 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 25463948..25464157 FT /note="Sequence from overlapping clone AL138730. Assembly FT confirmed by restriction digest data" FT misc_feature 25464159..25464195 FT /note="Sequence from overlapping clone AL138730. Assembly FT confirmed by restriction digest data" FT misc_feature 25464197..25464212 FT /note="Sequence from overlapping clone AL138730. Assembly FT confirmed by restriction digest data" FT misc_feature 25464214..25464218 FT /note="Sequence from overlapping clone AL138730. Assembly FT confirmed by restriction digest data" FT mRNA join(25465764..25466176,25471397..25471485, FT 25472655..25472859) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-002" FT /product="leucine rich repeat containing 16" FT /note="match: ESTs: Em:BE173626" FT misc_feature 25472829..25473034 FT /note="Sequence from overlapping clone AL138730. Assembly FT confirmed by restriction digest data" FT misc_feature 25473036..25473063 FT /note="Sequence from overlapping clone AL138730. Assembly FT confirmed by restriction digest data" FT misc_feature 25522127 FT /note="Clone_left_end: RP3-501N12" FT misc_feature 25522327..25693178 FT /note="annotated region of clone" FT mRNA join(AL024509.1:42968..43375,AL024509.1:48352..48449, FT AL160037.17:33730..33780,AL160037.17:40117..40176, FT AL160037.17:49099..49220,AL160037.17:63514..63611, FT AL160037.17:63955..64025,AL160037.17:64254..64327, FT AL160037.17:79489..79564,AL160037.17:84785..84873, FT AL160037.17:86043..86137,AL160037.17:95873..95959, FT AL160037.17:102098..102201,AL160037.17:105348..105425, FT AL160037.17:105564..105640,AL160037.17:108727..108831, FT AL160037.17:113782..113851,AL160037.17:123272..123353, FT AL160037.17:124123..124222,AL160037.17:124324..124378, FT AL160037.17:129291..129463,AL160037.17:130963..131031, FT AL160037.17:133860..133953,25529023..25529121, FT 25538083..25538211,25540175..25540306,25551138..25551313, FT 25554237..25554324,25556929..25557078,25581152..25581218, FT 25581471..25581667,25594643..25594755,25600542..25600974, FT 25605040..25605121,25606289..25606501,25610278..25610409, FT 25619675..25620758) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-001" FT /product="leucine rich repeat containing 16" FT /note="match: ESTs: Em:BM978535.1 Em:BM979059.1 FT Em:BM998880.1 Em:BP222923.1 Em:BQ423885.1 Em:CA313722.1 FT Em:CV330537.1" FT /note="match: cDNAs: Em:AK000055.1 Em:AK049059.1 FT Em:AK125696.1" FT CDS join(AL024509.1:43336..43375,AL024509.1:48352..48449, FT AL160037.17:33730..33780,AL160037.17:40117..40176, FT AL160037.17:49099..49220,AL160037.17:63514..63611, FT AL160037.17:63955..64025,AL160037.17:64254..64327, FT AL160037.17:79489..79564,AL160037.17:84785..84873, FT AL160037.17:86043..86137,AL160037.17:95873..95959, FT AL160037.17:102098..102201,AL160037.17:105348..105425, FT AL160037.17:105564..105640,AL160037.17:108727..108831, FT AL160037.17:113782..113851,AL160037.17:123272..123353, FT AL160037.17:124123..124222,AL160037.17:124324..124378, FT AL160037.17:129291..129463,AL160037.17:130963..131031, FT AL160037.17:133860..133953,25529023..25529121, FT 25538083..25538211,25540175..25540306,25551138..25551313, FT 25554237..25554324,25556929..25557078,25581152..25581218, FT 25581471..25581667,25594643..25594755,25600542..25600974, FT 25605040..25605121,25606289..25606501,25610278..25610409, FT 25619675..25619811) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-001" FT /standard_name="OTTHUMP00000016106" FT /product="leucine rich repeat containing 16" FT /note="match: proteins: Tr:Q5VZK9.1" FT /protein_id="CAI21583.1" FT /translation="MTEESSDVPRELIESIKDVIGRKIKISVKKKVKLEVKGDKVENKV FT LVLTSCRAFLVTARIPTKLELTFSYLEIHGVVCSKSAQMIVETEKCSISMKMASPEDVS FT EVLAHIGTCLRKIFPGLSPVRIMKKVSMEPSERLASLQALWDSQTVAEQGPCGGFSQMY FT ACVCDWLGFSYREEVQWDVDTIYLTQDTRELNLQDFSHLDHRDLIPIIAALEYNQWFTK FT LSSKDLKLSTDVCEQILRVVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTI FT NLAGNPLEDRGVSSLSIQFAKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANPLTASTLV FT HLDLSGNVLRGDDLSHMYNFLAQPNAIVHLDLSNTECSLDMVCGALLRGCLQYLAVLNL FT SRTVFSHRKGKEVPPSFKQFFSSSLALMHINLSGTKLSPEPLKALLLGLACNHNLKGVS FT LDLSNCELRSGGAQVLEGCIAEIHNITSLDISDNGLESDLSTLIVWLSKNRSIQHLALG FT KNFNNMKSKNLTPVLDNLVQMIQDEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKV FT DISGNGMGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIP FT MYDASQALKTNPEKTEDALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRI FT CVKVQDHLNSLRNCGGDAIQEDLKSAERLMRDAKNSKTLLPNLYHVGGASWAGASGLLS FT SPIQETLESMAGEVTRVVDEQLKALLESMVDAAENLCPNVMKKAHIRQDLIHASTEKIS FT IPRTFVKNVLLEQSGIDILNKISEVKLTVASFLSDRIVDEILDALSHCHHKLADHFSRR FT GKTLPQQESLEIELAEEKPVKRSIITVEELTEIERLEDLDTCMMTPKSKRKSIHSRMLR FT PVSRAFEMEFDLDKALEEVPIHIEDPPFPSLRQEKRSSGFISELPSEEGKKLEHFTKLR FT PKRNKKQQPTQAAVCAANIVSQDGEQNGLMGRVDEGVDEFFTKKVTKMDSKKWSTRGSE FT SHELNEGGDEKKKRDSRKSSGFLNLIKSRSKSERPPTILMTEEPSSPKGAVRSPPVDCP FT RKDTKAAEHNGNSERIEEIKTPDSFEESQGEEIGKVERSDSKSSPQAGRRYGVQVMGSG FT LLAEMKAKQEKRAACAQKKLGNDAVSQDSSSPALSGVERSDGGGAVPKLHPGLPENRFG FT LGTPEKNTKAEPKAEAGSRSRSSSSTPTSPKPLLQSPKPSLAARPVIPQKPRTASRPDD FT IPDSPSSPKVALLPPVLKKVPSDKERDGQSSPQPSPRTFSQEVSRRSWGQQAQEYQEQK FT QRSSSKDGHQGSKSNDSGEEAEKEFIFV" FT mRNA join(25610350..25610409,25612968..25613114, FT 25619675..25620758) FT /gene="LRRC16" FT /locus_tag="RP3-501N12.1-003" FT /product="leucine rich repeat containing 16" FT /note="match: cDNAs: Em:AK004138.1" FT polyA_signal 25620735..25620740 FT polyA_site 25620758 FT mRNA join(25652464..25652713,25653610..25653680, FT 25661780..25661872,25665171..25665260,25669739..25669795, FT 25670227..25670304,25682179..25682234,25689400..25689445, FT 25689701..25689760,25691284..25691352, FT AL512384.9:8357..8933) FT /gene="SCGN" FT /locus_tag="RP11-317E16.2-001" FT /product="secretagogin, EF-hand calcium binding protein" FT /note="match: ESTs: Em:AA327046 Em:AA498357 Em:AA644563 FT Em:AA814724 Em:AA902701 Em:AA975248 Em:AI269341 Em:AI299119 FT Em:AI300986 Em:AI350276 Em:AI918085 Em:AV750739 Em:AW204207 FT Em:AW247029 Em:AW247740 Em:AW250230 Em:AW295180 Em:AW478543 FT Em:AW962172 Em:BE222120 Em:BE551132 Em:BE645448 Em:BE654583 FT Em:BE670017 Em:BE674153 Em:BE674164 Em:BF001337 Em:BF196140 FT Em:BF220304 Em:BG142179 Em:R14422 Em:W31906 Em:W39269" FT /note="match: cDNAs: Em:BC000336 Em:BC000336.1 Em:BC003036 FT Em:BC003036.1 Em:Y16752" FT CDS join(25652632..25652713,25653610..25653680, FT 25661780..25661872,25665171..25665260,25669739..25669795, FT 25670227..25670304,25682179..25682234,25689400..25689445, FT 25689701..25689760,25691284..25691352, FT AL512384.9:8357..8485) FT /gene="SCGN" FT /locus_tag="RP11-317E16.2-001" FT /standard_name="OTTHUMP00000016124" FT /product="secretagogin, EF-hand calcium binding protein" FT /note="match: proteins: Sw:O76038" FT /protein_id="CAI21585.1" FT /translation="MDSSREPTLGRLDAAGFWQVWQRFDADEKGYIEEKELDAFFLHML FT MKLGTDDTVMKANLHKVKQQFMTTQDASKDGRIRMKELAGMFLSEDENFLLLFRRENPL FT DSSVEFMQIWRKYDADSSGFISAAELRNFLRDLFLHHKKAISEAKLEEYTGTMMKIFDR FT NKDGRLDLNDLARILALQENFLLQFKMDACSTEERKRDFEKIFAYYDVSKTGALEGPEV FT DGFVKDMMELVQPSISGVDLDKFREILLRHCDVNKDGKIQKSELALCLGLKINP" FT CDS complement(25679028..25679640) FT /pseudo FT /locus_tag="RP3-501N12.3-001" FT /product="PRELI domain containing 1 (PRELID1) pseudogene" FT /note="match: proteins: Sw:Q90673 Sw:Q9Y255" FT misc_feature 25693179..25743041 FT /note="annotated region of clone" FT polyA_signal 25701986..25701991 FT polyA_site 25702011 FT mRNA complement(25726360..25726755) FT /gene="HIST1H2AA" FT /locus_tag="RP11-317E16.5-001" FT /product="histone cluster 1, H2aa" FT CDS complement(25726360..25726755) FT /gene="HIST1H2AA" FT /locus_tag="RP11-317E16.5-001" FT /standard_name="OTTHUMP00000016122" FT /product="histone cluster 1, H2aa" FT /note="match: proteins: Sw:P02262 Sw:P02263 Sw:P02273 FT Sw:P02276 Sw:P02277 Sw:P0C0S9 Sw:P13912 Sw:P20671 Sw:P22752 FT Sw:P25469 Sw:P28001 Sw:P35061 Sw:P35062 Sw:P35064 Sw:P40280 FT Sw:P40282 Sw:P69140 Sw:Q43214 Sw:Q64522 Sw:Q6GSS7 Tr:P91960 FT Tr:Q9NV63 Tr:Q9STD8" FT /protein_id="CAC44614.1" FT /translation="MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIG FT AGAPVYLAAVLEYLTAEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIA FT QGGVLPNIQAVLLPKKTESHHHKAQSK" FT mRNA 25727137..25727520 FT /gene="HIST1H2BA" FT /locus_tag="RP11-317E16.4-001" FT /product="histone cluster 1, H2ba" FT CDS 25727137..25727520 FT /gene="HIST1H2BA" FT /locus_tag="RP11-317E16.4-001" FT /standard_name="OTTHUMP00000016123" FT /product="histone cluster 1, H2ba" FT /note="match: proteins: Sw:P10853 Sw:P10854 Sw:P33778 FT Sw:P62807 Sw:P62808 Sw:P70696 Sw:Q00729 Sw:Q16778 Sw:Q99877 FT Sw:Q99880 Sw:Q9SGE3 Tr:P91961 Tr:Q9M3H6" FT /protein_id="CAC44615.1" FT /translation="MPEVSSKGATISKKGFKKAVVKTQKKEGKKRKRTRKESYSIYIYK FT VLKQVHPDTGISSKAMSIMNSFVTDIFERIASEASRLAHYSKRSTISSREIQTAVRLLL FT PGELAKHAVSEGTKAVTKYTSSK" FT CDS complement(25732011..25732390) FT /pseudo FT /locus_tag="RP11-317E16.1-001" FT /product="histone 1, H2b, pseudogene 1" FT /note="match: proteins: Sw:P02283 Sw:P02293 Sw:P07795 FT Sw:P10853 Sw:P10854 Sw:P16867 Sw:P17271 Sw:P23754 Sw:P33778 FT Sw:P35068 Sw:P35069 Sw:P54345 Sw:P62807 Sw:P62808 Sw:P70696 FT Sw:Q00729 Sw:Q16778 Sw:Q99877 Sw:Q99880 Tr:Q9U5I0" FT CDS 25732693..25733039 FT /pseudo FT /locus_tag="RP11-317E16.3-001" FT /product="histone 1, H2a, pseudogene 1" FT /note="match: proteins: Sw:P02262 Sw:P02263 Sw:P0C0S9 FT Sw:P13912 Sw:P20671 Sw:P22752 Sw:P28001 Sw:P35062 Sw:Q64522 FT Sw:Q6GSS7" FT misc_feature 25742842 FT /note="Clone_left_end: RP11-352G14" FT mRNA join(AL022170.1:130238..130487,AL022170.1:131384..131454, FT AL022170.1:139554..139646,AL022170.1:142945..143034, FT AL022170.1:147513..147569,AL022170.1:148001..148078, FT AL022170.1:159953..160008,AL022170.1:167174..167219, FT AL022170.1:167475..167534,AL022170.1:169058..169126, FT 25701435..25702011) FT /gene="SCGN" FT /locus_tag="RP11-317E16.2-001" FT /product="secretagogin, EF-hand calcium binding protein" FT /note="match: ESTs: Em:AA327046 Em:AA498357 Em:AA644563 FT Em:AA814724 Em:AA902701 Em:AA975248 Em:AI269341 Em:AI299119 FT Em:AI300986 Em:AI350276 Em:AI918085 Em:AV750739 Em:AW204207 FT Em:AW247029 Em:AW247740 Em:AW250230 Em:AW295180 Em:AW478543 FT Em:AW962172 Em:BE222120 Em:BE551132 Em:BE645448 Em:BE654583 FT Em:BE670017 Em:BE674153 Em:BE674164 Em:BF001337 Em:BF196140 FT Em:BF220304 Em:BG142179 Em:R14422 Em:W31906 Em:W39269" FT /note="match: cDNAs: Em:BC000336 Em:BC000336.1 Em:BC003036 FT Em:BC003036.1 Em:Y16752" FT CDS join(AL022170.1:130406..130487,AL022170.1:131384..131454, FT AL022170.1:139554..139646,AL022170.1:142945..143034, FT AL022170.1:147513..147569,AL022170.1:148001..148078, FT AL022170.1:159953..160008,AL022170.1:167174..167219, FT AL022170.1:167475..167534,AL022170.1:169058..169126, FT 25701435..25701563) FT /gene="SCGN" FT /locus_tag="RP11-317E16.2-001" FT /standard_name="OTTHUMP00000016124" FT /product="secretagogin, EF-hand calcium binding protein" FT /note="match: proteins: Sw:O76038" FT /protein_id="CAH72415.1" FT /translation="MDSSREPTLGRLDAAGFWQVWQRFDADEKGYIEEKELDAFFLHML FT MKLGTDDTVMKANLHKVKQQFMTTQDASKDGRIRMKELAGMFLSEDENFLLLFRRENPL FT DSSVEFMQIWRKYDADSSGFISAAELRNFLRDLFLHHKKAISEAKLEEYTGTMMKIFDR FT NKDGRLDLNDLARILALQENFLLQFKMDACSTEERKRDFEKIFAYYDVSKTGALEGPEV FT DGFVKDMMELVQPSISGVDLDKFREILLRHCDVNKDGKIQKSELALCLGLKINP" FT misc_feature 25743042..25791184 FT /note="annotated region of clone" FT mRNA join(25754927..25755009,25762155..25762281, FT 25769213..25769418,25770295..25770528,25770612..25770699, FT 25771154..25771240,25773503..25773621,25773741..25773902, FT 25776823..25776955,25777040..25777187,25778154..25778244, FT 25779282..25781419) FT /gene="SLC17A4" FT /locus_tag="RP11-352G14.2-001" FT /product="solute carrier family 17 (sodium phosphate), FT member 4" FT /note="match: ESTs: Em:AW662505" FT /note="match: cDNAs: Em:AB020527 Em:AK024903" FT CDS join(25762191..25762281,25769213..25769418, FT 25770295..25770528,25770612..25770699,25771154..25771240, FT 25773503..25773621,25773741..25773902,25776823..25776955, FT 25777040..25777187,25778154..25778244,25779282..25779416) FT /gene="SLC17A4" FT /locus_tag="RP11-352G14.2-001" FT /standard_name="OTTHUMP00000016125" FT /product="solute carrier family 17 (sodium phosphate), FT member 4" FT /note="match: proteins: Sw:O00476 Sw:O00624 Sw:Q14916 FT Sw:Q28722 Sw:Q62795 Sw:Q9MZD1 Sw:Q9NRA2 Tr:Q9Y2C5" FT /protein_id="CAD20154.1" FT /translation="MSTGPDVKATVGDISSDGNLNVAQEECSRKGFCSVRHGLALILQL FT CNFSIYTQQMNLSIAIPAMVNNTAPPSQPNASTERPSTDSQGYWNETLKEFKAMAPAYD FT WSPEIQGIILSSLNYGSFLAPIPSGYVAGIFGAKYVVGAGLFISSFLTLFIPLAANAGV FT ALLIVLRIVQGIAQVMVLTGQYSIWVKWAPPLERSQLTTIAGSGSMLGSFIVLLAGGLL FT CQTIGWPYVFYIFGGIGCACCPLWFPLIYDDPVNHPFISAGEKRYIVCSLAQQDCSPGW FT SLPIRAMIKSLPLWAILVSYFCEYWLFYTIMAYTPTYISSVLQANLRDSGILSALPFVV FT GCICIILGGLLADFLLSRKILRLITIRKLFTAIGVLFPSVILVSLPWVRSSHSMTMTFL FT VLSSAISSFCESGALVNFLDIAPRYTGFLKGLLQVFAHIAGAISPTAAGFFISQDSEFG FT WRNVFLLSAAVNISGLVFYLIFGRADVQDWAKEQTFTHL" FT polyA_site 25781419 FT misc_feature 25790985 FT /note="Clone_left_end: RP1-139G21" FT mRNA join(AL138726.12:96934..96979,AL138726.12:100870..101042, FT AL138726.12:107588..107821,AL138726.12:107905..107992, FT AL138726.12:108349..108435,AL138726.12:114290..114408, FT AL138726.12:114511..114672,AL138726.12:115733..115865, FT AL138726.12:115958..116105,AL138726.12:126523..126613, FT AL138726.12:128584..128720,complement(25783125..25783446)) FT /gene="SLC17A1" FT /locus_tag="RP11-352G14.1-001" FT /product="solute carrier family 17 (sodium phosphate), FT member 1" FT /note="match: ESTs: Em:AA004450 Em:AA004989 Em:AA004990 FT Em:AA707208 Em:AI262144 Em:AI269193 Em:AI433406 Em:AI522108 FT Em:AI640281 Em:AI700812 Em:AI768648 Em:H47319 Em:H47403 FT Em:H52710 Em:H52987 Em:N53056 Em:N73241 Em:R11332 Em:R11333 FT Em:T24014" FT /note="match: cDNAs: Em:D28532 Em:M76466 Em:U28504 FT Em:X71355 Em:X77241 Em:Y10513" FT misc_feature complement(25791185..25927730) FT /note="annotated region of clone" FT mRNA complement(join(25913545..25913679,25914773..25914898, FT 25915727..25915874,25915964..25916096,25916913..25917074, FT 25917197..25917315,25918715..25918801,25921234..25921321, FT 25921407..25921640,25923923..25924134,25925997..25926045)) FT /gene="SLC17A2" FT /locus_tag="RP1-139G21.2-002" FT /product="solute carrier family 17 (sodium phosphate), FT member 2" FT /note="match: ESTs: Em:AA273532.1 Em:AI606736.1 FT Em:AV653531.1 Em:BI247804.1 Em:BI331428.1" FT /note="match: cDNAs: Em:BC018306.1" FT CDS complement(join(25914790..25914898,25915727..25915874, FT 25915964..25916096,25916913..25917074,25917197..25917315, FT 25918715..25918801,25921234..25921321,25921407..25921640, FT 25923923..25924134,25925997..25926024)) FT /gene="SLC17A2" FT /locus_tag="RP1-139G21.2-002" FT /standard_name="OTTHUMP00000016130" FT /product="solute carrier family 17 (sodium phosphate), FT member 2" FT /note="match: proteins: Tr:Q8VCX8" FT /protein_id="CAI19542.1" FT /translation="MDGKPATRKGPDFCSLRYGLALIMHFSNFTMITQRVSLSIAIIAM FT VNTTQQQGLSNASTEGPVADAFNNSSISIKEFDTKASVYQWSPETQGIIFSSINYGIIL FT TLIPSGYLAGIFGAKKMLGAGLLISSLLTLFTPLAADFGVILVIMVRTVQGMAQGMAWT FT GQFTIWAKWAPPLERSKLTTIAGSGSAFGSFIILCVGGLISQALSWPFIFYIFGSTGCV FT CCLLWFTVIYDDPMHHPCISVREKEHILSSLAQQPSSPGRAVPIKAMVTCLPLWAIFLG FT FFSHFWLCTIILTYLPTYISTLLHVNIRDSGVLSSLPFIAAASCTILGGQLADFLLSRN FT LLRLITVRKLFSSLGLLLPSICAVALPFVASSYVITIILLILIPGTSNLCDSGFIINTL FT DIAPRYASFLMGISRGFGLIAGIISSTATGFLISQVGPVY" FT CDS complement(join(25913523..25913679,25914808..25914898, FT 25915964..25916096,25916913..25917074,25917197..25917315, FT 25918715..25918801,25921234..25921321,25921407..25921640, FT 25923923..25924134,25925997..25926024)) FT /gene="SLC17A2" FT /locus_tag="RP1-139G21.2-001" FT /standard_name="OTTHUMP00000016129" FT /product="solute carrier family 17 (sodium phosphate), FT member 2" FT /note="match: proteins: Sw:O00624" FT /protein_id="CAC69101.1" FT /translation="MDGKPATRKGPDFCSLRYGLALIMHFSNFTMITQRVSLSIAIIAM FT VNTTQQQGLSNASTEGPVADAFNNSSISIKEFDTKASVYQWSPETQGIIFSSINYGIIL FT TLIPSGYLAGIFGAKKMLGAGLLISSLLTLFTPLAADFGVILVIMVRTVQGMAQGMAWT FT GQFTIWAKWAPPLERSKLTTIAGSGSAFGSFIILCVGGLISQALSWPFIFYIFGSTGCV FT CCLLWFTVIYDDPMHHPCISVREKEHILSSLAQQPSSPGRAVPIKAMVTCLPLWAIFLG FT FFSHFWLCTIILTYLPTYISTLLHVNIRDSGVLSSLPFIAAASCTILGGQLADFLLSRN FT LLRLITVRKLFSSLDMQVSSWESQGDLGSSQESSLPLPLDSSSVRILSLVGGMSFSCLL FT QSTCLAWSFTSRLDKQNFKTGPKRGPLPASEDIKLQT" FT polyA_signal complement(25912983..25912988) FT polyA_site complement(25912982) FT CDS complement(25882254..25882623) FT /pseudo FT /locus_tag="RP1-139G21.1-001" FT /product="histone 1, H2a, pseudogene 2" FT /note="match: proteins: Sw:P02262 Sw:P04908 Sw:P08844 FT Sw:P0C0S9 Sw:P20671 Sw:P22752 Sw:P28001 Sw:P35062 Sw:P81294 FT Sw:Q00728 Sw:Q62523 Sw:Q64522 Sw:Q6GSS7" FT mRNA complement(join(25845328..25845526,25845608..25845744, FT 25849602..25849692,25850033..25850180,25850276..25850405, FT 25850687..25850848,25850987..25851105,25855372..25855458, FT 25861852..25861939,25862461..25862672,25868525..25868644, FT 25882258..25882514)) FT /gene="SLC17A3" FT /locus_tag="RP1-139G21.3-001" FT /product="solute carrier family 17 (sodium phosphate), FT member 3" FT /note="match: cDNAs: Em:U90545" FT /note="match: ESTs: Em:AA023168 Em:AA051307 Em:AA105250 FT Em:AA116763 Em:AA407651 Em:AA416963 Em:AA492640 Em:AA528953 FT Em:AA596369 Em:AA632084 Em:Aa674867 Em:AA706766 Em:AA858296 FT Em:AI152907 Em:AI222455 Em:AI244777 Em:AI247271 Em:AI268551 FT Em:AI733707 Em:AI792430 Em:AV110929 Em:AV689458 Em:BE278606 FT Em:BE570653 Em:BE782896 Em:BE885942 Em:BE893194 Em:F24112 FT Em:H15373 Em:W10474 Em:W40792 Em:W53415" FT mRNA complement(join(<25862461..25862672,25868525..25868615, FT 25874395..25874439)) FT /gene="SLC17A3" FT /locus_tag="RP1-139G21.3-003" FT /product="solute carrier family 17 (sodium phosphate), FT member 3" FT /note="match: ESTs: Em:AV689458" FT CDS complement(join(<25862461..25862672,25868525..25868615)) FT /gene="SLC17A3" FT /locus_tag="RP1-139G21.3-003" FT /standard_name="OTTHUMP00000016128" FT /product="solute carrier family 17 (sodium phosphate), FT member 3" FT /note="match: proteins: Sw:O00476 Tr:Q9Y2C5" FT /protein_id="CAC16542.1" FT /translation="MATKTELSPTARESKNAQDMQVDETLIPRKVPSLCSARYGIALVL FT HFCNFTTIAQNVIMNITMVAMVNSTSPQSQLNDSSEVLPVDSFGGLSKAPKSLPAK" FT CDS complement(join(25845610..25845744,25849602..25849692, FT 25850033..25850180,25850276..25850405,25850687..25850848, FT 25850987..25851105,25855372..25855458,25861852..25861939, FT 25862461..25862672,25868525..25868615)) FT /gene="SLC17A3" FT /locus_tag="RP1-139G21.3-001" FT /standard_name="OTTHUMP00000016126" FT /product="solute carrier family 17 (sodium phosphate), FT member 3" FT /note="match: proteins: Sw:O00476 Tr:Q9Y2C5" FT /protein_id="CAC16543.1" FT /translation="MATKTELSPTARESKNAQDMQVDETLIPRKVPSLCSARYGIALVL FT HFCNFTTIAQNVIMNITMVAMVNSTSPQSQLNDSSEVLPVDSFGGLSKAPKSLPAKSSI FT LGGQFAIWEKWGPPQERSRLCSIALSGMLLGCFTAILIGGFISETLGWPFVFYIFGGVG FT CVCCLLWFVVIYDDPVSYPWISTSEKEYIISSLKQQVGSSKQPLPIKAMLRSLPIWSIC FT LGCFSHQWLVSTMVVYIPTYISSVYHVNIRDNGLLSALPFIVAWVIGMVGGYLADFLLT FT KKFRLITVRKIATILGSLPSSALIVSLPYLNSGYITATALLTLSCGLSTLCQSGIYINV FT LDIAPRYSSFLMGASRGFSSIAPVIVPTVSGFLLSQDPEFGWRNVFFLLFAVNLLGLLF FT YLIFGEADVQEWAKERKLTRL" FT mRNA complement(join(<25850687..25850848,25850987..25851105, FT 25855372..25855458,25861852..25861939,25862024..>25862235)) FT /gene="SLC17A3" FT /locus_tag="RP1-139G21.3-002" FT /product="solute carrier family 17 (sodium phosphate), FT member 3" FT /note="match: cDNAs: Em:Z83953" FT CDS complement(join(<25850687..25850848,25850987..25851105, FT 25855372..25855458,25861852..25861939,25862024..>25862235)) FT /codon_start=3 FT /gene="SLC17A3" FT /locus_tag="RP1-139G21.3-002" FT /standard_name="OTTHUMP00000016127" FT /product="solute carrier family 17 (sodium phosphate), FT member 3" FT /note="match: proteins: Sw:O00476" FT /protein_id="CAC16544.1" FT /translation="QIQGIIFGAVGYGGILTMAPSGYLAGRVGTKRVVGISLFATSFLT FT LCIPLATDFGIVLLIVTRIVQGLSQSSILGGQFAIWEKWGPPQERSRLCSIALSGMLLG FT CFTAILIGGFISETLGWPFVFYIFGGVGCVCCLLWFVVIYDDPVSYPWISTSEKEYIIS FT SLKQQVGSSKQPLPIKAMLRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRD FT " FT mRNA complement(join(<25833294..25833591,25845608..25845744, FT 25849602..25849692,25850033..25850180)) FT /gene="SLC17A3" FT /locus_tag="RP1-139G21.3-004" FT /product="solute carrier family 17 (sodium phosphate), FT member 3" FT /note="match: ESTs: Em:AA116763 Em:AA706766 Em:AA858296 FT Em:AI222455 Em:AI244777 Em:AI247271 Em:AI311320 Em:AI733707 FT Em:AI792430 Em:AI821963" FT polyA_signal complement(25845342..25845347) FT polyA_site complement(25845328) FT polyA_signal complement(25833314..25833319) FT polyA_site complement(25833294) FT mRNA complement(join(AL391194.13:40184..40505, FT 25799011..25799147,25801118..25801208,25811626..25811773, FT 25811866..25811998,25813059..25813220,25813323..25813441, FT 25819296..25819382,25819739..25819826,25819910..25820143, FT 25826689..25826861,25830752..25830797)) FT /gene="SLC17A1" FT /locus_tag="RP11-352G14.1-001" FT /product="solute carrier family 17 (sodium phosphate), FT member 1" FT /note="match: ESTs: Em:AA004450 Em:AA004989 Em:AA004990 FT Em:AA707208 Em:AI262144 Em:AI269193 Em:AI433406 Em:AI522108 FT Em:AI640281 Em:AI700812 Em:AI768648 Em:H47319 Em:H47403 FT Em:H52710 Em:H52987 Em:N53056 Em:N73241 Em:R11332 Em:R11333 FT Em:T24014" FT /note="match: cDNAs: Em:D28532 Em:M76466 Em:U28504 FT Em:X71355 Em:X77241 Em:Y10513" FT CDS complement(join(25799013..25799147,25801118..25801208, FT 25811626..25811773,25811866..25811998,25813059..25813220, FT 25813323..25813441,25819296..25819382,25819739..25819826, FT 25819910..25820143,25826689..25826861,25830752..25830779)) FT /gene="SLC17A1" FT /locus_tag="RP11-352G14.1-001" FT /standard_name="OTTHUMP00000017909" FT /product="solute carrier family 17 (sodium phosphate), FT member 1" FT /note="match: proteins: Sw:Q14916 Sw:Q28722 Sw:Q61983 FT Sw:Q62795 Tr:Q9Y2C5" FT /protein_id="CAI19543.1" FT /translation="MDNRLPPKKVPGFCSFRYGLSFLVHCCNVIITAQRACLNLTMVVM FT VNSTDPHGLPNTSTKKLLDNIKNPMYNWSPDIQGIILSSTSYGVIIIQVPVGYFSGIYS FT TKKMIGFALCLSSVLSLLIPPAAGIGVAWVVVCRAVQGAAQGIVATAQFEIYVKWAPPL FT ERGRLTSMSTSGFLLGPFIVLLVTGVICESLGWPMVFYIFGACGCAVCLLWFVLFYDDP FT KDHPCISISEKEYITSSLVQQVSSSRQSLPIKAILKSLPVWAISTGSFTFFWSHNIMTL FT YTPMFINSMLHVNIKENGFLSSLPYLFAWICGNLAGQLSDFFLTRNILSVIAVRKLFTA FT AGFLLPAIFGVCLPYLSSTFYSIVIFLILAGATGSFCLGGVFINGLDIAPRYFGFIKAC FT STLTGMIGGLIASTLTGLILKQDPESAWFKTFILMAAINVTGLIFYLIVATAEIQDWAK FT EKQHTRL" FT misc_feature complement(25810664) FT /note="Clone_left_end: RP11-352G14" FT misc_feature complement(25791185) FT /note="Clone_left_end: RP1-139G21" FT mRNA join(U91328.1:210448..210782, FT complement(25925997..25926107), FT complement(25923923..25924134), FT complement(25921407..25921640), FT complement(25921234..25921321), FT complement(25918715..25918801), FT complement(25917197..25917315), FT complement(25916913..25917074), FT complement(25915964..25916096), FT complement(25914808..25914898), FT complement(25912982..25913679)) FT /gene="SLC17A2" FT /locus_tag="RP1-139G21.2-001" FT /product="solute carrier family 17 (sodium phosphate), FT member 2" FT /note="match: cDNAs: Em:U90544.1" FT repeat_region 26139786..26140056 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26137611..26137759) FT /rpt_family="MER3" FT /rpt_type=DISPERSED FT repeat_region complement(26136983..26137231) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26135507..26135791 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26134826..26135255) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26132824..26133084) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26132671..26132780) FT /rpt_family="MSTAR" FT /rpt_type=DISPERSED FT repeat_region 26132093..26132399 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26131495..26131764 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26130912..26131178) FT /rpt_family="MSTAR" FT /rpt_type=DISPERSED FT repeat_region 26130607..26130903 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26129545..26129805) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26127961..26128388 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26125978..26126266) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26125573..26125837 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT CDS 26124461..26124853 FT /codon_start=1 FT /product="histone 2A-like protein" FT /protein_id="AAB82086.1" FT /translation="MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT repeat_region 26122005..26122299 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26120418..26120690 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26116663..26116944 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26115482..26115633) FT /rpt_family="MIR" FT /rpt_type=DISPERSED FT repeat_region complement(26111349..26111445) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26110418..26110695 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26109780..26110064) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26109276..26109468 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26107137..26107477) FT /rpt_family="MER1" FT /rpt_type=DISPERSED FT repeat_region complement(26106973..26107052) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26105225..26105519 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26104739..26105020 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26102035..26102155) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26100642..26101242 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26100041..26100327) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26099113..26099706) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26098746..26098855) FT /rpt_family="MIR" FT /rpt_type=DISPERSED FT repeat_region complement(26096376..26096651) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26095436..26095755 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT CDS join(26087669..26087744,26091069..26091332, FT 26091542..26091817,26092913..26093188,26093347..26093460, FT 26094414..26094454) FT /codon_start=1 FT /gene="HLA-H" FT /product="hereditary hemochromatosis" FT /protein_id="AAB82083.1" FT /translation="MGPRARPALLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLS FT LFEALGYVDDQLFVFYDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWT FT IMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAW FT PTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTT FT LRCRALNYYPQNITMKWLKDKQPMDAKEFEPKDVLPNGDGTYQGWITLAVPPGEEQRYT FT CQVEHPGLDQPLIVIWEPSPSGTLVIGVISGIAVFVVILFIGILFIILRKRQGSRGAMG FT HYVLAERE" FT repeat_region 26092105..26092419 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26090399..26090688 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26089915..26090142 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26089353..26089467) FT /rpt_family="MER20" FT /rpt_type=DISPERSED FT repeat_region complement(26085568..26086011) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26084826..26085202 FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region 26084486..26084766 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26083472..26083627) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26082804..26083169) FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region complement(26082387..26082615) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26081550..26081988 FT /rpt_family="LTR2" FT /rpt_type=DISPERSED FT repeat_region 26075274..26075622 FT /rpt_family="LTR2" FT /rpt_type=DISPERSED FT repeat_region complement(26074234..26074523) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26073271..26073544) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26072850..26073137) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26071447..26072179 FT /rpt_family="LTR1" FT /rpt_type=DISPERSED FT repeat_region complement(26071050..26071108) FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region complement(26070586..26070865) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26070331..26070557) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26070062..26070141) FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region complement(26069754..26069813) FT /rpt_family="MER3" FT /rpt_type=DISPERSED FT repeat_region complement(26068205..26068276) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26067748..26067896 FT /rpt_family="MER39" FT /rpt_type=DISPERSED FT repeat_region 26067750..26067827 FT /rpt_family="MER21" FT /rpt_type=DISPERSED FT repeat_region complement(26067311..26067572) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26066726..26067026 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26065003..26065205) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26064223..26064360 FT /rpt_family="MIR" FT /rpt_type=DISPERSED FT repeat_region 26061891..26062011 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26061255..26061338) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26060560..26060849 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26059648..26059940) FT /rpt_family="MER33" FT /rpt_type=DISPERSED FT repeat_region 26058789..26059138 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26058495..26058745 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26053886..26054152 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26053696..26053729 FT /rpt_family="MER44C" FT /rpt_type=DISPERSED FT repeat_region complement(26052899..26053463) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26051253..26051538 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26050330..26050627 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26049710..26049971 FT /rpt_family="MER33" FT /rpt_type=DISPERSED FT repeat_region 26049710..26049764 FT /rpt_family="MER3" FT /rpt_type=DISPERSED FT repeat_region 26048856..26049564 FT /rpt_family="LTR8" FT /rpt_type=DISPERSED FT repeat_region complement(26047412..26047708) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26044713..26044988) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26043028..26043321) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26042716..26042825) FT /rpt_family="MER41" FT /rpt_type=DISPERSED FT repeat_region 26041931..26042132 FT /rpt_family="MER39" FT /rpt_type=DISPERSED FT repeat_region 26041935..26042016 FT /rpt_family="MER34" FT /rpt_type=DISPERSED FT repeat_region 26041644..26041928 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26040550..26040849 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26040215..26040278 FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region 26039063..26039353 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26037946..26038115 FT /rpt_family="MER33" FT /rpt_type=DISPERSED FT repeat_region 26035833..26036123 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26035235..26035502) FT /rpt_family="MER39" FT /rpt_type=DISPERSED FT repeat_region complement(26035244..26035323) FT /rpt_family="MER21" FT /rpt_type=DISPERSED FT repeat_region 26034222..26034533 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26032734..26032871 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26029046..26029437) FT /rpt_family="LTR7" FT /rpt_type=DISPERSED FT repeat_region complement(26025311..26025563) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26021294..26021575 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26020355..26020421 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26015703..26015953 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26015340..26015620) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26014816..26015028 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26013207..26013393 FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region 26012029..26012303 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26011680..26011929 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26010660..26010743) FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region complement(26010478..26010545) FT /rpt_family="MER44C" FT /rpt_type=DISPERSED FT repeat_region complement(26010277..26010345) FT /rpt_family="MER44C" FT /rpt_type=DISPERSED FT repeat_region complement(26009104..26009379) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26004052..26004169) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26002918..26003180 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 26002100..26002394 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(26001330..26001580) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25999459..26000425 FT /rpt_family="LTR5" FT /rpt_type=DISPERSED FT repeat_region complement(25998928..25999219) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25996951..25997253) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25996191..25996290) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25995913..25996129) FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region complement(25995298..25995567) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25993618..25993904) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25990568..25990847) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25989745..25989875) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25989319..25989488) FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region complement(25988725..25988967) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25987500..25987551) FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region 25986483..25986759 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25984815..25985019 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT CDS join(25966751..25967161,25969553..25969648, FT 25972097..25972327,25973282..25973304,25973401..25973513, FT 25983392..25983915) FT /codon_start=1 FT /gene="RoRet" FT /product="unknown" FT /note="similar to the 52kd Ro/SSA protein and RFP" FT /protein_id="AAB82084.1" FT /translation="MASTTSTKKMMEEATCSICLSLMTNPVSINCGHSYCHLCITDFFK FT NPSQKQLRQETFCCPQCRAPFHMDSLRPNKQLGSLIEALKETDQEMSCEEHGEQFHLFC FT EDEGQLICWRCERAPQHKGHTTALVEDVCQGYKEKLQKAVTKLKQLEDRCTEQKLSTAM FT RITKWKEKVQIQRQKIRSDFKNLQCFLHEEEKSYLWRLEKEEQQTLSRLRDYEAGLGLK FT SNELKSHILELEEKCQGSAQKLLQNVNDTLSRSWAVKLETSEAVSLELHTMCNVSKLYF FT DVKKMLRSHQVSVTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVLGCE FT GFTSGRRYFEVDVGEGTGWDLGVCMENVQRGTGMKQEPQSGFWTLRLCKKKGYVALTSP FT PTSLHLHEQPLLVGIFLDYEAGVVSFYNGNTGCHIFTFPKASFSDTLRPYFQVYQYSPL FT FLPPPGD" FT repeat_region 25983042..25983323 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25980652..25980938) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25978842..25979175) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25978401..25978543) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25977461..25977905 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25976528..25976778) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25975264..25975706) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25974236..25974711) FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region complement(25970572..25970652) FT /rpt_family="MARINER1" FT /rpt_type=DISPERSED FT repeat_region complement(25970172..25970443) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25968581..25968661 FT /rpt_family="MIR" FT /rpt_type=DISPERSED FT repeat_region complement(25967764..25968032) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25965881..25966166 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25965711..25965845 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25965460..25965625 FT /rpt_family="MER3" FT /rpt_type=DISPERSED FT repeat_region complement(25965044..25965331) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25961234..25961635 FT /rpt_family="MER41" FT /rpt_type=DISPERSED FT repeat_region 25960859..25961223 FT /rpt_family="THE1" FT /rpt_type=DISPERSED FT repeat_region 25960709..25960868 FT /rpt_family="MER41" FT /rpt_type=DISPERSED FT repeat_region complement(25958208..25958335) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25957861..25958145 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25956747..25956892) FT /rpt_family="MER4" FT /rpt_type=DISPERSED FT repeat_region complement(25955477..25956308) FT /rpt_family="MER41" FT /rpt_type=DISPERSED FT repeat_region 25955642..25955911 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25955280..25955435) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25954636..25955205 FT /rpt_family="MER41" FT /rpt_type=DISPERSED FT repeat_region 25951538..25952007 FT /rpt_family="MER41" FT /rpt_type=DISPERSED FT repeat_region 25951250..25951507 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25950927..25951210 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25950829..25950898 FT /rpt_family="MER41" FT /rpt_type=DISPERSED FT repeat_region complement(25949442..25949729) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25948488..25948756) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25947640..25947898 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25947132..25947413 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25946432..25946562 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25946320..25946408) FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region 25945954..25946320 FT /rpt_family="THE1" FT /rpt_type=DISPERSED FT repeat_region complement(25945840..25945944) FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region 25943851..25944080 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25943629..25943838 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25941324..25941738) FT /rpt_family=">MER42" FT /rpt_type=DISPERSED FT repeat_region 25941008..25941309 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25940693..25940931 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25939552..25939640) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25938762..25939033) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25938053..25938128 FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region 25937594..25937837 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25935393..25935693 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25934011..25934310) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region 25933659..25933937 FT /rpt_family="L1" FT /rpt_type=DISPERSED FT repeat_region 25933285..25933357 FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region 25932331..25932564 FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT repeat_region complement(25931740..25932193) FT /rpt_family="MLT1" FT /rpt_type=DISPERSED FT repeat_region complement(25930040..25930345) FT /rpt_family="Alu" FT /rpt_type=DISPERSED FT misc_feature 26141287..26194946 FT /note="annotated region of clone" FT misc_feature 26147408 FT /note="Clone_left_end: RP1-34B20" FT mRNA 26156619..26157278 FT /gene="HIST1H1E" FT /locus_tag="RP1-221C16.1-001" FT /product="histone cluster 1, H1e" FT CDS 26156619..26157278 FT /gene="HIST1H1E" FT /locus_tag="RP1-221C16.1-001" FT /standard_name="OTTHUMP00000016139" FT /product="histone cluster 1, H1e" FT /note="match: proteins: Sw:P10412 Sw:P15865 Sw:P43274" FT /protein_id="CAC04132.1" FT /translation="MSETAPAAPAAPAPAEKTPVKKKARKSAGAAKRKASGPPVSELIT FT KAVAASKERSGVSLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASGS FT FKLNKKAASGEAKPKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKAKKPAA FT AAGAKKAKSPKKAKAAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKKAAAKKK" FT mRNA 26158374..26158869 FT /gene="HIST1H2BD" FT /locus_tag="RP1-221C16.2-002" FT /product="histone cluster 1, H2bd" FT /note="match: ESTs: Em:AA169623.1 Em:AA557199.1 FT Em:AA654491.1 Em:AA828449.1 Em:AA873858.1 Em:AA885643.1 FT Em:AI125923.1 Em:AI183311.1 Em:AI201415.1 Em:AI244237.1 FT Em:AI340351.1 Em:AI621027.1 Em:AI670128.1 Em:AI685612.1 FT Em:AI830305.1 Em:AI904196.1 Em:AW009762.1 Em:AW058149.1 FT Em:AW059277.1 Em:AW541512.1 Em:AW543877.1 Em:T27838.1" FT /note="match: cDNAs: Em:L19779" FT mRNA join(26158374..26158787,26171203..26171577) FT /gene="HIST1H2BD" FT /locus_tag="RP1-221C16.2-001" FT /product="histone cluster 1, H2bd" FT /note="match: ESTs: Em:AA169623.1 Em:AA654491.1 FT Em:AI183311.1 Em:AI244237.1 Em:AI703148.1 Em:AI830305.1 FT Em:AW058149.1" FT /note="match: cDNAs: Em:AJ223353" FT CDS 26158398..26158778 FT /gene="HIST1H2BD" FT /locus_tag="RP1-221C16.2-001" FT /standard_name="OTTHUMP00000016142" FT /product="histone cluster 1, H2bd" FT /note="match: proteins: Sw:P10854" FT /protein_id="CAC04133.1" FT /translation="MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT polyA_signal 26158843..26158848 FT polyA_site 26158862 FT polyA_site 26158866 FT polyA_site 26158869 FT CDS 26164265..26164551 FT /pseudo FT /locus_tag="RP1-221C16.7-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q6PKG0 Tr:O70797" FT polyA_signal 26171553..26171558 FT polyA_site 26171574 FT polyA_site 26171577 FT mRNA 26184023..>26184408 FT /gene="HIST1H2BE" FT /locus_tag="RP1-221C16.3-001" FT /product="histone 1, H2be" FT /note="match: ESTs: Em:AA080125.1 Em:AA217829.1 FT Em:AA237851.1 Em:AA255154.1 Em:AA271225.1 Em:AA280257.1 FT Em:AA286932.1 Em:AA286933.1 Em:AA315768.1 Em:AA380653.1 FT Em:AA385278.1 Em:AA396588.1 Em:AA493023.1 Em:AA493453.1 FT Em:AA964055.1 Em:AI016731.1 Em:AI195956.1 Em:AI510308.1 FT Em:AW012454.1 Em:AW404382.1 Em:N42055.1 Em:R34169.1 FT Em:R76836.1 Em:R76859.1 Em:R78849.1 Em:W41523.1 Em:W41584.1 FT Em:W49399.1 Em:W71872.1" FT /note="match: cDNAs: Em:AJ223352" FT CDS 26184024..26184404 FT /gene="HIST1H2BE" FT /locus_tag="RP1-221C16.3-001" FT /standard_name="OTTHUMP00000016144" FT /product="histone 1, H2be" FT /note="match: proteins: Sw:P10853 Sw:P23527 Sw:P33778 FT Sw:P62807 Sw:P62808 Sw:Q16778 Sw:Q93079 Sw:Q99877" FT /protein_id="CAC04130.1" FT /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT mRNA complement(26188993..26189304) FT /gene="HIST1H4D" FT /locus_tag="RP1-221C16.4-001" FT /product="histone 1, H4d" FT CDS complement(26188993..26189304) FT /gene="HIST1H4D" FT /locus_tag="RP1-221C16.4-001" FT /standard_name="OTTHUMP00000016140" FT /product="histone 1, H4d" FT /note="match: proteins: Sw:P04915 Sw:P27996 Sw:P35057 FT Sw:P35059 Sw:P50566 Sw:P62783 Sw:P62788 Sw:P62799 Sw:P84045 FT Sw:Q27443 Tr:P91878" FT /protein_id="CAC04128.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT misc_feature 26194947..26284147 FT /note="annotated region of clone" FT CDS 26195794..26195999 FT /pseudo FT /locus_tag="RP1-34B20.15-001" FT /product="histone 1, H1, pseudogene 1" FT /note="match: proteins: Sw:P10412 Sw:P15865 Sw:P43274 FT Sw:P43277" FT mRNA complement(26197068..26197478) FT /gene="HIST1H3D" FT /locus_tag="RP1-34B20.10-001" FT /product="histone 1, H3d" FT /note="match: cDNAs: Em:L19778 Em:Y00392 Em:Z30939" FT CDS complement(26197068..26197478) FT /gene="HIST1H3D" FT /locus_tag="RP1-34B20.10-001" FT /standard_name="OTTHUMP00000016149" FT /product="histone 1, H3d" FT /note="match: proteins: Sw:P02299 Sw:P08898 Sw:P08903 FT Sw:P22843 Sw:P68428 Sw:P68433 Sw:P69079 Sw:P69248 Sw:P84232 FT Sw:P90543 Sw:Q16695 Tr:Q27532 Tr:Q27718 Tr:Q27719 Tr:Q42782 FT Tr:Q42832 Tr:Q43203 Tr:Q92132 Tr:Q9U5H8" FT /protein_id="CAC03412.1" FT /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG FT TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGL FT FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" FT mRNA complement(26199079..26199471) FT /gene="HIST1H2AD" FT /locus_tag="RP1-34B20.7-001" FT /product="histone cluster 1, H2ad" FT /note="match: cDNAs: Em:AF081192 Em:AF171080 Em:AK001765 FT Em:AL133626 Em:D17015 Em:L19779 Em:M99065 Em:U70133 FT Em:U79139 Em:U90545 Em:X14850 Em:X58069" FT CDS complement(26199079..26199471) FT /gene="HIST1H2AD" FT /locus_tag="RP1-34B20.7-001" FT /standard_name="OTTHUMP00000016153" FT /product="histone cluster 1, H2ad" FT /note="match: proteins: Sw:O23628 Sw:P02262 Sw:P02263 FT Sw:P04908 Sw:P0C0S9 Sw:P20671 Sw:P22752 Sw:P22752 Sw:P25470 FT Sw:P28001 Sw:P40280 Sw:P40281 Sw:P40282 Sw:Q00728 Sw:Q64522 FT Sw:Q6GSS7 Sw:Q9M531 Tr:P91960 Tr:Q29579 Tr:Q92064 FT Tr:Q9NV63" FT /protein_id="CAB39197.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT mRNA 26199787..26200167 FT /gene="HIST1H2BF" FT /locus_tag="RP1-34B20.9-001" FT /product="histone 1, H2bf" FT /note="match: cDNAs: Em:AJ223353 Em:AL050291 Em:M60756" FT CDS 26199787..26200167 FT /gene="HIST1H2BF" FT /locus_tag="RP1-34B20.9-001" FT /standard_name="OTTHUMP00000016159" FT /product="histone 1, H2bf" FT /protein_id="CAC03411.1" FT /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT CDS 26202384..26202881 FT /pseudo FT /locus_tag="RP1-34B20.4-001" FT /product="ribosomal protein S10 pseudogene 1" FT /note="match: proteins: Sw:O77302 Sw:P46783 Sw:P63326 FT Sw:Q07254 Sw:Q08745 Sw:Q9LTF2 Sw:Q9SW09 Sw:Q9VB14 Tr:Q14489 FT Tr:Q9NQ39" FT mRNA 26204873..26205184 FT /gene="HIST1H4E" FT /locus_tag="RP1-34B20.6-001" FT /product="histone 1, H4e" FT /note="match: cDNAs: Em:J00986 Em:J00988" FT CDS 26204873..26205184 FT /gene="HIST1H4E" FT /locus_tag="RP1-34B20.6-001" FT /standard_name="OTTHUMP00000016156" FT /product="histone 1, H4e" FT /note="match: proteins: Tr:Q9N3Y8" FT /protein_id="CAC03414.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT mRNA complement(26216491..26216871) FT /gene="HIST1H2BG" FT /locus_tag="RP1-34B20.17-001" FT /product="histone 1, H2bg" FT CDS complement(26216491..26216871) FT /gene="HIST1H2BG" FT /locus_tag="RP1-34B20.17-001" FT /standard_name="OTTHUMP00000016160" FT /product="histone 1, H2bg" FT /note="match: proteins: Sw:P02294 Sw:P06899 Sw:P10853 FT Sw:P10854 Sw:P23527 Sw:P30755 Sw:P33778 Sw:P49120 Sw:P62807 FT Sw:P62808 Sw:Q16778 Sw:Q93079 Sw:Q99877 Sw:Q9LZ45 Tr:Q90859 FT Tr:Q90860 Tr:Q9Z2Q9 Tr:Q9Z2R0" FT /protein_id="CAC03417.1" FT /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT mRNA 26217203..26217595 FT /gene="HIST1H2AE" FT /locus_tag="RP1-34B20.12-001" FT /product="histone cluster 1, H2ae" FT /note="match: cDNAs: Em:AF041483 Em:AF044286 Em:AF054174 FT Em:AF058444 Em:AF151534 Em:S79038 Em:X98536" FT CDS 26217203..26217595 FT /gene="HIST1H2AE" FT /locus_tag="RP1-34B20.12-001" FT /standard_name="OTTHUMP00000016155" FT /product="histone cluster 1, H2ae" FT /note="match: proteins: Sw:P02262 Sw:P02263 Sw:P04908 FT Sw:P0C0S9 Sw:P20671 Sw:P22752 Sw:P22752 Sw:P28001 Sw:P40282 FT Sw:Q00728 Sw:Q64522 Sw:Q6GSS7 Tr:P91960 Tr:Q29579 Tr:Q92064 FT Tr:Q9NV63" FT /protein_id="CAB39192.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT mRNA 26225383..26225793 FT /gene="HIST1H3E" FT /locus_tag="RP1-34B20.8-001" FT /product="histone 1, H3e" FT /note="match: cDNAs: Em:AF112370 Em:X91866 Em:Z85979" FT CDS 26225383..26225793 FT /gene="HIST1H3E" FT /locus_tag="RP1-34B20.8-001" FT /standard_name="OTTHUMP00000016150" FT /product="histone 1, H3e" FT /note="match: proteins: Sw:P02299 Sw:P08898 Sw:P08903 FT Sw:P22843 Sw:P68428 Sw:P68433 Sw:P69079 Sw:P69248 Sw:P84232 FT Sw:P90543 Sw:Q16695 Tr:Q27532 Tr:Q27718 Tr:Q27719 Tr:Q42782 FT Tr:Q42832 Tr:Q43203 Tr:Q92132 Tr:Q9U5H8" FT /protein_id="CAC03413.1" FT /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG FT TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGL FT FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" FT CDS 26233350..26233483 FT /pseudo FT /locus_tag="RP1-34B20.2-001" FT /product="histone 1, H2a, pseudogene 3" FT /note="match: proteins: Sw:P04909 Sw:P04910 Sw:P08844" FT mRNA complement(26234496..26235161) FT /gene="HIST1H1D" FT /locus_tag="RP1-34B20.3-001" FT /product="histone cluster 1, H1d" FT CDS complement(26234496..26235161) FT /gene="HIST1H1D" FT /locus_tag="RP1-34B20.3-001" FT /standard_name="OTTHUMP00000016148" FT /product="histone cluster 1, H1d" FT /note="match: proteins: Sw:P02252 Sw:P06349 Sw:P08284 FT Sw:P08285 Sw:P08286 Sw:P08287 Sw:P08288 Sw:P10412 Sw:P15864 FT Sw:P15865 Sw:P15866 Sw:P15867 Sw:P16402 Sw:P16403 Sw:P43274 FT Sw:P43275 Sw:P43277 Sw:Q07133 Tr:Q98979 Tr:Q9QVB4 FT Tr:Q9QVB5" FT /protein_id="CAB39189.1" FT /translation="MSETAPLAPTIPAPAEKTPVKKKAKKAGATAGKRKASGPPVSELI FT TKAVAASKERSGVSLAALKKALAAAGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGASG FT SFKLNKKAASGEGKPKAKKAGAAKPRKPAGAAKKPKKVAGAATPKKSIKKTPKKVKKPA FT TAAGTKKVAKSAKKVKTPQPKKAAKSPAKAKAPKPKAAKPKSGKPKVTKAKKAAPKKK" FT mRNA 26240654..26240965 FT /gene="HIST1H4F" FT /locus_tag="RP1-34B20.18-001" FT /product="histone 1, H4f" FT /note="match: cDNAs: Em:AF008301 Em:J00989" FT CDS 26240654..26240965 FT /gene="HIST1H4F" FT /locus_tag="RP1-34B20.18-001" FT /standard_name="OTTHUMP00000016157" FT /product="histone 1, H4f" FT /note="match: proteins: Sw:P04915 Sw:P27996 Sw:P35057 FT Sw:P35059 Sw:P50566 Sw:P62783 Sw:P62788 Sw:P62799 Sw:P84045 FT Sw:Q27443 Tr:O61175 Tr:O61178 Tr:P90677 Tr:P91878 Tr:P91880 FT Tr:Q27637 Tr:Q27821 Tr:Q27875 Tr:Q27898 Tr:Q99525" FT /protein_id="CAC03418.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT mRNA complement(26246909..26247205) FT /gene="HIST1H4G" FT /locus_tag="RP1-34B20.14-001" FT /product="histone cluster 1, H4g" FT CDS complement(26246909..26247205) FT /gene="HIST1H4G" FT /locus_tag="RP1-34B20.14-001" FT /standard_name="OTTHUMP00000016158" FT /product="histone cluster 1, H4g" FT /note="match: proteins: Tr:Q27875 Tr:Q99525" FT /protein_id="CAB39187.1" FT /translation="MSVRGKAGKGLGKGGAKCHRKVLSDNIQGITKCTIRRLARHGGVK FT RILGLIYEETRRVFKVFLENVIWYAVTNTEHAKRKTVTAMAVVYVLKRQGRTL" FT mRNA complement(26250423..26250833) FT /gene="HIST1H3F" FT /locus_tag="RP1-34B20.13-001" FT /product="histone 1, H3f" FT /note="match: cDNAs: Em:M11353 Em:M11354" FT CDS complement(26250423..26250833) FT /gene="HIST1H3F" FT /locus_tag="RP1-34B20.13-001" FT /standard_name="OTTHUMP00000016151" FT /product="histone 1, H3f" FT /note="match: proteins: Tr:Q9XG57" FT /protein_id="CAC03416.1" FT /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG FT TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGL FT FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" FT mRNA 26251879..26252259 FT /gene="HIST1H2BH" FT /locus_tag="RP1-34B20.11-001" FT /product="histone cluster 1, H2bh" FT CDS 26251879..26252259 FT /gene="HIST1H2BH" FT /locus_tag="RP1-34B20.11-001" FT /standard_name="OTTHUMP00000016161" FT /product="histone cluster 1, H2bh" FT /note="match: proteins: Sw:P23527 Sw:Q93079" FT /protein_id="CAB39185.1" FT /translation="MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT mRNA complement(26271202..26271612) FT /gene="HIST1H3G" FT /locus_tag="RP1-34B20.1-001" FT /product="histone 1, H3g" FT /note="match: cDNAs: Em:D16963 Em:D17021 Em:X13605 FT Em:X73683" FT CDS complement(26271202..26271612) FT /gene="HIST1H3G" FT /locus_tag="RP1-34B20.1-001" FT /standard_name="OTTHUMP00000016152" FT /product="histone 1, H3g" FT /protein_id="CAC03421.1" FT /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG FT TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGL FT FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" FT CDS complement(26272421..26272768) FT /pseudo FT /locus_tag="RP1-34B20.16-001" FT /product="histone 1, H2a, pseudogene 4" FT /note="match: proteins: Sw:O23628 Sw:P02272 Sw:P04911 FT Sw:P04912 Sw:P08985 Sw:P08991 Sw:P09588 Sw:P0C0S7 Sw:Q27511 FT Sw:Q9SII0 Tr:O97320 Tr:Q92646 Tr:Q9STD8" FT /db_xref="PSEUDO:CAB39183.1" FT mRNA 26273204..26273584 FT /gene="HIST1H2BI" FT /locus_tag="RP1-34B20.5-001" FT /product="histone 1, H2bi" FT /note="match: cDNAs: Em:M25487" FT CDS 26273204..26273584 FT /gene="HIST1H2BI" FT /locus_tag="RP1-34B20.5-001" FT /standard_name="OTTHUMP00000016162" FT /product="histone 1, H2bi" FT /protein_id="CAC03420.1" FT /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT misc_feature 26283948 FT /note="Clone_left_end: RP1-45P21" FT misc_feature 26284148..26454048 FT /note="annotated region of clone" FT mRNA complement(<26285341..26285737) FT /gene="HIST1H4H" FT /locus_tag="RP1-45P21.5-001" FT /product="histone 1, H4h" FT /note="match: ESTs: Em:BF824201 Em:N41747 Em:T29496" FT /note="match: cDNAs: Em:AF001288 Em:J00985 Em:J00986" FT CDS complement(26285416..26285727) FT /gene="HIST1H4H" FT /locus_tag="RP1-45P21.5-001" FT /standard_name="OTTHUMP00000016169" FT /product="histone 1, H4h" FT /note="match: proteins: Sw:P04915 Sw:P27996 Sw:P35057 FT Sw:P35059 Sw:P40287 Sw:P50566 Sw:P62783 Sw:P62788 Sw:P62799 FT Sw:P84045 Sw:Q27443 Tr:O61175 Tr:O61178 Tr:P90677 Tr:P91878 FT Tr:P91880 Tr:Q27821 Tr:Q27875 Tr:Q27898 Tr:Q99525 FT Tr:Q9N3Y8" FT /protein_id="CAC69642.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT CDS complement(26322104..26322520) FT /pseudo FT /locus_tag="RP1-45P21.7-001" FT /product="H3 histone, family 3A, pseudogene 1" FT /note="match: proteins: Sw:P02299 Sw:P02302 Sw:P08903 FT Sw:P17319 Sw:P22843 Sw:P68433 Sw:P69079 Sw:P69245 Sw:P84232 FT Sw:P84247 Sw:Q10453 Tr:P90540" FT mRNA join(26365459..26365580,26368218..26368278, FT 26368406..26368495,26368793..26369140,26370550..26370831, FT 26373125..26373325,26373504..26373524,26373615..26373641, FT 26374555..26374601,26374999..26375026,26376757..26378546) FT /gene="BTN3A2" FT /locus_tag="RP1-45P21.6-001" FT /product="butyrophilin, subfamily 3, member A2" FT /note="match: cDNAs: Em:AF257505" FT mRNA join(26365492..26365580,26368218..26368278, FT 26368406..26368495,26368793..26369140,26370550..26370831, FT 26373125..26373325,26373504..26373524,26373615..26373641, FT 26374555..26374601,26374999..26375026,26376025..26376464) FT /gene="BTN3A2" FT /locus_tag="RP1-45P21.6-002" FT /product="butyrophilin, subfamily 3, member A2" FT /note="match: ESTs: Em:AI039995 Em:AI269452 Em:AI538590 FT Em:AI811836 Em:AL135445 Em:AW363565 Em:AW474467 Em:AW474512 FT Em:AW802823 Em:AW802828 Em:BE208673 Em:BF435519 Em:BG057291 FT Em:BG324070 Em:BG324159" FT /note="match: cDNAs: Em:BC002832 Em:U90144 Em:U90546" FT mRNA join(26365494..26365580,26368218..26368278, FT 26368406..26368495,26368793..26369140,26370550..26370831, FT 26373125..26373325,26373504..26373524,26373615..26373641, FT 26374555..26374601,26374999..26375026,26375743..26376044) FT /gene="BTN3A2" FT /locus_tag="RP1-45P21.6-003" FT /product="butyrophilin, subfamily 3, member A2" FT /note="match: ESTs: Em:AW028256 Em:BF591580" FT /note="match: cDNAs: Em:CR626326.1" FT CDS join(26368411..26368495,26368793..26369140, FT 26370550..26370831,26373125..26373325,26373504..26373524, FT 26373615..26373641,26374555..26374595) FT /gene="BTN3A2" FT /locus_tag="RP1-45P21.6-001" FT /standard_name="OTTHUMP00000016164" FT /product="butyrophilin, subfamily 3, member A2" FT /note="match: proteins: Sw:P78410" FT /protein_id="CAA17277.2" FT /translation="MKMASSLAFLLLNFHVSLLLVQLLTPCSAQFSVLGPSGPILAMVG FT EDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGI FT TAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSNLHVEVKGYEDGGIH FT LECRSTGWYPQPQIQWSNAKGENIPAVEAPVVADGVGLYEVAASVIMRGGSGEGVSCII FT RNSLLGLEKTASISIADPFFRSAQPWIAALAGTLPILLLLLAGASYFLWRQQKEITALS FT SEIESEQEMKEMGYAATEREISLRESLQEELKRKKIQYLTRGEESSSDTNKSA" FT misc_feature 26371291..26371388 FT /note="Single clone region" FT polyA_signal 26376061..26376066 FT polyA_site 26376085 FT polyA_signal 26378518..26378523 FT polyA_site 26378546 FT mRNA join(26383354..26383409,26384020..26384143, FT 26385243..26385590,26388241..26388522,26390233..26390439, FT 26390915..26390935,26391031..26391057,26392603..26395102) FT /gene="BTN2A2" FT /locus_tag="RP1-45P21.2-001" FT /product="butyrophilin, subfamily 2, member A2" FT /note="match: ESTs: Em:AA341547 Em:AI885174 Em:AU128832 FT Em:BE247480 Em:BF310656 Em:BF929834 Em:BG474367 Em:R94042" FT /note="match: cDNAs: Em:U90142 Em:U90550" FT CDS join(26384050..26384143,26385243..26385590, FT 26388241..26388522,26390233..26390439,26390915..26390935, FT 26391031..26391057,26392603..26393195) FT /gene="BTN2A2" FT /locus_tag="RP1-45P21.2-001" FT /standard_name="OTTHUMP00000016167" FT /product="butyrophilin, subfamily 2, member A2" FT /note="match: proteins: Sw:P18892 Sw:Q7KYR7 Sw:Q8WVV5 FT Tr:O35441 Tr:O70359 Tr:Q9JK39" FT /protein_id="CAC03425.1" FT /translation="MEPAAALHFSLPASLLLLLLLLLLSLCALVSAQFTVVGPANPILA FT MVGENTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRITFVS FT KDINRGSVALVIHNVTAQENGIYRCYFQEGRSYDEAILRLVVAGLGSKPLIEIKAQEDG FT SIWLECISGGWYPEPLTVWRDPYGEVVPALKEVSIADADGLFMVTTAVIIRDKYVRNVS FT CSVNNTLLGQEKETVIFIPESFMPSASPWMVALAVILTASPWMVSMTVILAVFIIFMAV FT SICCIKKLQREKKILSGEKKVEQEEKEIAQQLQEELRWRRTFLHAADVVLDPDTAHPEL FT FLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVC FT RHSVERKGEVLLIPQNGFWTLEMFGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVS FT FYNMRDRSHIYTCPRSAFTVPVRPFFRLGSDDSPIFICPALTGASGVMVPEEGLKLHRV FT GTHQSL" FT polyA_signal 26395082..26395087 FT polyA_site 26395102 FT misc_feature 26398461..26398503 FT /note="Single clone region" FT mRNA join(26402478..26402640,26404363..26404733) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-004" FT /product="butyrophilin, subfamily 3, member A1" FT /note="match: ESTs: Em:DA959980.1 Em:DB288271.1" FT mRNA join(26402486..26402640,26404363..26404455, FT 26405600..26405876,26406137..>26406181) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-005" FT /product="butyrophilin, subfamily 3, member A1" FT /note="match: ESTs: Em:DC342430.1" FT mRNA join(26402536..26402640,26405600..26405876, FT 26406137..26406484,26407899..26408180,26409761..26409961, FT 26410122..26410260,26411337..26411363,26411783..26411809, FT 26413397..26415432) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-003" FT /product="butyrophilin, subfamily 3, member A1" FT /note="match: cDNAs: Em:BC065567.1" FT /note="match: ESTs: Em:CT001600.1 Em:DC408468.1" FT mRNA join(26402536..26402640,26405600..26405876, FT 26406137..26406484,26407899..26408180,26409761..26409961, FT 26410122..26410142,26410234..26410260,26411337..26411363, FT 26411783..26411809,26413397..26415436) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-001" FT /product="butyrophilin, subfamily 3, member A1" FT /note="match: cDNAs: Em:U90552.2 Em:Y07827" FT /note="match: ESTs: Em:AI417615 Em:AU121796 Em:AW163334 FT Em:AW747872 Em:AW747879 Em:AW960793 Em:BF769905 Em:BG400807 FT Em:BG426058 Em:T86754 Em:T92609 Em:T93286 Em:T94392 FT Em:T98055" FT mRNA join(26402582..26402640,26405770..26405876, FT 26406137..26406484,26407899..26408180,26409761..26409961, FT 26410122..26410142,26410234..26410260,26411337..26411363, FT 26411783..26411809,26412933..26412995) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-002" FT /product="butyrophilin, subfamily 3, member A1" FT /note="match: ESTs: Em:T86577.1 Em:T89056.1 Em:T92609.1 FT Em:T92875.1 Em:T94934.1 Em:T98146.1" FT /note="match: cDNAs: Em:Y07827.1" FT CDS join(26405792..26405876,26406137..>26406181) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-005" FT /standard_name="OTTHUMP00000197084" FT /product="butyrophilin, subfamily 3, member A1" FT /protein_id="CAO03580.1" FT /translation="MKMASFLAFLLLNFRVCLLLLQLLMPHSAQFSVLGPSGPILAM" FT CDS join(26405792..26405876,26406137..26406484, FT 26407899..26408180,26409761..26409961,26410122..26410142, FT 26410234..26410260,26411337..26411363,26411783..26411809, FT 26412933..26412973) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-002" FT /standard_name="OTTHUMP00000164619" FT /product="butyrophilin, subfamily 3, member A1" FT /note="match: proteins: Sw:O00481-2.3 Sw:O00481.3" FT /protein_id="CAM28245.1" FT /translation="MKMASFLAFLLLNFRVCLLLLQLLMPHSAQFSVLGPSGPILAMVG FT EDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGI FT TAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIH FT LECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTI FT RSSLLGLEKTASISIADPFFRSAQRWIAALAGTLPVLLLLLGGAGYFLWQQQEEKKTQF FT RKKKREQELREMAWSTMKQEQSTRVKLLEELRWRSIQYASRGERHSAYNEWKKALFKPG FT EEMLQMRLHFVK" FT CDS join(26405792..26405876,26406137..26406484, FT 26407899..26408180,26409761..26409961,26410122..26410142, FT 26410234..26410260,26411337..26411363,26411783..26411809, FT 26413397..26413920) FT /gene="BTN3A1" FT /locus_tag="RP1-45P21.1-001" FT /standard_name="OTTHUMP00000016163" FT /product="butyrophilin, subfamily 3, member A1" FT /note="match: proteins: Sw:O00481 Sw:P78410 Sw:Q63345" FT /protein_id="CAC03424.3" FT /translation="MKMASFLAFLLLNFRVCLLLLQLLMPHSAQFSVLGPSGPILAMVG FT EDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGI FT TAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIH FT LECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTI FT RSSLLGLEKTASISIADPFFRSAQRWIAALAGTLPVLLLLLGGAGYFLWQQQEEKKTQF FT RKKKREQELREMAWSTMKQEQSTRVKLLEELRWRSIQYASRGERHSAYNEWKKALFKPA FT DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEV FT EVGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPK FT KVGVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTLEPTALTICPA" FT polyA_signal 26412969..26412974 FT polyA_site 26412991 FT polyA_signal 26415414..26415419 FT polyA_site 26415436 FT CDS join(26422347..26422425,26423161..26423505, FT 26426470..26426751,26428099..26428217,26429013..26429027) FT /gene="BTN2A3" FT /locus_tag="RP1-45P21.3-001" FT /standard_name="OTTHUMP00000016168" FT /product="butyrophilin, subfamily 2, member A3" FT /note="match: proteins: Sw:Q7KYR7 Sw:Q9UIR0" FT /protein_id="CAC69644.2" FT /translation="MEPAAALHFSRPASLLLLLSLCALVSAQVTVVGPTDPILAMVGEN FT TTLRCCLSPEENAEDMEVRWFQSQFSPAVFVYKGGRERTEEQKEEYRGRTTFVSKDSRG FT SVALIIHNVTAEDNGIYQCYFQEGRSCNEAILHLVVAGLDSEPVIEMRDHEDGGIQLEC FT ISGGWYPKPLTVWRDPYGEVVPALKEVSTPDADSLFMVTTAVIIRDKSVRNVSCSINDT FT LLGQKKESVIFIPESFMPSRSPCVVILPVIMIILMIPIAICIYWINNLQKEKKGECL" FT mRNA join(26422347..26422425,26423161..26423505, FT 26426470..26426751,26428099..26428217,26429013..26432342) FT /gene="BTN2A3" FT /locus_tag="RP1-45P21.3-001" FT /product="butyrophilin, subfamily 2, member A3" FT /note="match: ESTs: Em:AA010960 Em:AA476679 Em:AW601788 FT Em:BE245857 Em:BF797339 Em:CNSLT0MDM Em:CNSLT0YGF FT Em:CNSLT10K9 Em:R84338 Em:R93883" FT /note="match: cDNAs: Em:U90543" FT polyA_signal 26432234..26432239 FT polyA_site 26432342 FT mRNA join(26443610..26443887,26444185..26444532, FT 26445932..26446213,26448476..26448676,26448845..26448865, FT 26448956..26448982,26449890..26449916,26450335..26450361, FT 26451903..26453650) FT /gene="BTN3A3" FT /locus_tag="RP1-45P21.4-001" FT /product="butyrophilin, subfamily 3, member A3" FT /note="match: ESTs: Em:AI003024 Em:AV696193 Em:AW179224 FT Em:AW179227 Em:BE003080 Em:BE397188 Em:BE561410 Em:BF973195 FT Em:BG282498 Em:CNSLT01HW" FT /note="match: cDNAs: Em:U90548" FT CDS join(26443803..26443887,26444185..26444532, FT 26445932..26446213,26448476..26448676,26448845..26448865, FT 26448956..26448982,26449890..26449916,26450335..26450361, FT 26451903..26452639) FT /gene="BTN3A3" FT /locus_tag="RP1-45P21.4-001" FT /standard_name="OTTHUMP00000016166" FT /product="butyrophilin, subfamily 3, member A3" FT /note="match: proteins: Sw:O00478 Tr:O35441 Tr:P78409" FT /protein_id="CAA17273.1" FT /translation="MKMASSLAFLLLNFHVSLFLVQLLTPCSAQFSVLGPSGPILAMVG FT EDADLPCHLFPTMSAETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGI FT TAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHIEVKGYEDGGIH FT LECRSTGWYPQPQIKWSDTKGENIPAVEAPVVADGVGLYAVAASVIMRGSSGGGVSCII FT RNSLLGLEKTASISIADPFFRSAQPWIAALAGTLPISLLLLAGASYFLWRQQKEKIALS FT RETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWKMALFKPA FT DVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSGRHYWEV FT EVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNLKLPEPP FT RKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTLEPTALTICPIPKE FT VESSPDPDLVPDHSLETPLTPGLANESGEPQAEVTSLLLPAHPGAEVSPSATTNQNHKL FT QARTEALY" FT polyA_signal 26453621..26453626 FT polyA_site 26453650 FT misc_feature 26453948 FT /note="Clone_right_end: RP1-45P21" FT misc_feature complement(26454049..26462963) FT /note="annotated region of clone" FT CDS join(26458865..26458946,26459709..26460056, FT AL121936.17:609..890,AL121936.17:2583..2771, FT AL121936.17:3318..3338,AL121936.17:3427..3453, FT AL121936.17:5313..5914) FT /gene="BTN2A1" FT /locus_tag="CTA-14H9.1-001" FT /standard_name="OTTHUMP00000016170" FT /product="butyrophilin, subfamily 2, member A1" FT /note="match: proteins: Sw:O00478 Sw:P18892 Sw:P18892 FT Sw:P78410 Sw:Q7KYR7 Sw:Q7KYR7 Sw:Q7TST0 Sw:Q8WVV5" FT /protein_id="CAB71221.2" FT /translation="MESAAALHFSRPASLLLLLLSLCALVSAQFIVVGPTDPILATVGE FT NTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRTTFVSKDIS FT RGSVALVIHNITAQENGTYRCYFQEGRSYDEAILHLVVAGLGSKPLISMRGHEDGGIRL FT ECISRGWYPKPLTVWRDPYGGVAPALKEVSMPDADGLFMVTTAVIIRDKSVRNMSCSIN FT NTLLGQKKESVIFIPVALPIIVVILMIPIAVCIYWINKLQKEKKILSGEKEFERETREI FT ALKELEKERVQKEEELQVKEKLQEELRWRRTFLHAVDVVLDPDTAHPDLFLSEDRRSVR FT RCPFRHLGESVPDNPERFDSQPCVLGRESFASGKHYWEVEVENVIEWTVGVCRDSVERK FT GEVLLIPQNGFWTLEMHKGQYRAVSSPDRILPLKESLCRVGVFLDYEAGDVSFYNMRDR FT SHIYTCPRSAFSVPVRPFFRLGCEDSPIFICPALTGANGVTVPEEGLTLHRVGTHQSL" FT mRNA join(26458202..26458370,26458835..26458946, FT 26459709..26460056,AL121936.17:609..890, FT AL121936.17:2583..2771,AL121936.17:3318..3338, FT AL121936.17:3427..3453,AL121936.17:5313..6877) FT /gene="BTN2A1" FT /locus_tag="CTA-14H9.1-001" FT /product="butyrophilin, subfamily 2, member A1" FT /note="match: ESTs: Em:AA341547 Em:AA476679 Em:R84338 FT Em:R93883 Em:R94042" FT /note="match: cDNAs: Em:U90142 Em:U90543 Em:U90550" FT misc_feature complement(26454049) FT /note="Clone_left_end: RP1-3E1" FT misc_feature 26462964..26585842 FT /note="annotated region of clone" FT CDS join(complement(AL050330.11:4018..4099), FT complement(AL050330.11:2908..3255),26463472..26463753, FT 26465446..26465634,26466181..26466201,26466290..26466316, FT 26468176..26468777) FT /gene="BTN2A1" FT /locus_tag="CTA-14H9.1-001" FT /standard_name="OTTHUMP00000016170" FT /product="butyrophilin, subfamily 2, member A1" FT /note="match: proteins: Sw:O00478 Sw:P18892 Sw:P18892 FT Sw:P78410 Sw:Q7KYR7 Sw:Q7KYR7 Sw:Q7TST0 Sw:Q8WVV5" FT /protein_id="CAC16801.2" FT /translation="MESAAALHFSRPASLLLLLLSLCALVSAQFIVVGPTDPILATVGE FT NTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRTTFVSKDIS FT RGSVALVIHNITAQENGTYRCYFQEGRSYDEAILHLVVAGLGSKPLISMRGHEDGGIRL FT ECISRGWYPKPLTVWRDPYGGVAPALKEVSMPDADGLFMVTTAVIIRDKSVRNMSCSIN FT NTLLGQKKESVIFIPVALPIIVVILMIPIAVCIYWINKLQKEKKILSGEKEFERETREI FT ALKELEKERVQKEEELQVKEKLQEELRWRRTFLHAVDVVLDPDTAHPDLFLSEDRRSVR FT RCPFRHLGESVPDNPERFDSQPCVLGRESFASGKHYWEVEVENVIEWTVGVCRDSVERK FT GEVLLIPQNGFWTLEMHKGQYRAVSSPDRILPLKESLCRVGVFLDYEAGDVSFYNMRDR FT SHIYTCPRSAFSVPVRPFFRLGCEDSPIFICPALTGANGVTVPEEGLTLHRVGTHQSL" FT mRNA join(complement(AL050330.11:4594..4762), FT complement(AL050330.11:4018..4129), FT complement(AL050330.11:2908..3255),26463472..26463753, FT 26465446..26465634,26466181..26466201,26466290..26466316, FT 26468176..26469740) FT /gene="BTN2A1" FT /locus_tag="CTA-14H9.1-001" FT /product="butyrophilin, subfamily 2, member A1" FT /note="match: ESTs: Em:AA341547 Em:AA476679 Em:R84338 FT Em:R93883 Em:R94042" FT /note="match: cDNAs: Em:U90142 Em:U90543 Em:U90550" FT mRNA join(26501449..26501593,26501818..26502165, FT 26505153..26505434,26506911..26507060,26508178..26508198, FT 26508289..26508315,26508729..26510650) FT /gene="BTN1A1" FT /locus_tag="CTA-14H9.2-001" FT /product="butyrophilin, subfamily 1, member A1" FT /note="match: cDNAs: Em:M35551 Em:U39576" FT CDS join(26501515..26501593,26501818..26502165, FT 26505153..26505434,26506911..26507060,26508178..26508198, FT 26508289..26508315,26508729..26509402) FT /gene="BTN1A1" FT /locus_tag="CTA-14H9.2-001" FT /standard_name="OTTHUMP00000017981" FT /product="butyrophilin, subfamily 1, member A1" FT /note="match: proteins: Sw:P18892 Sw:Q13410 Sw:Q62556" FT /protein_id="CAC16802.1" FT /translation="MAVFPSSGLPRCLLTLILLQLPKLDSAPFDVIGPPEPILAVVGED FT AELPCRLSPNASAEHLELRWFRKKVSPAVLVHRDGREQEAEQMPEYRGRATLVQDGIAK FT GRVALRIRGVRVSDDGEYTCFFREDGSYEEALVHLKVAALGSDPHISMQVQENGEICLE FT CTSVGWYPEPQVQWRTSKGEKFPSTSESRNPDEEGLFTVAASVIIRDTSAKNVSCYIQN FT LLLGQEKKVEISIPASSLPRLTPWIVAVAVILMVLGLLTIGSIFFTWRLYNERPRERRN FT EFSSKERLLEELKWKKATLHAVDVTLDPDTAHPHLFLYEDSKSVRLEDSRQKLPEKTER FT FDSWPCVLGRETFTSGRHYWEVEVGDRTDWAIGVCRENVMKKGFDPMTPENGFWAVELY FT GNGYWALTPLRTPLPLAGPPRRVGIFLDYESGDISFYNMNDGSDIYTFSNVTFSGPLRP FT FFCLWSSGKKPLTICPIADGPERVTVIANAQDLSKEIPLSPMGEDSAPRDADTLHSKLI FT PTQPSQGAP" FT polyA_signal 26510626..26510631 FT polyA_site 26510651 FT mRNA 26522076..26526807 FT /locus_tag="CTA-14H9.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA010153 Em:AA237071 Em:AA242913 FT Em:AA243338 Em:AA280341 Em:AA292800 Em:AA384378 Em:AA476666 FT Em:AA598509 Em:AA603412 Em:AA634946 Em:AA643828 Em:AA837657 FT Em:AA947819 Em:AA968512 Em:AA987568 Em:AF075304 Em:AI065144 FT Em:AI075935 Em:AI110805 Em:AI250884 Em:AI252657 Em:AI267686 FT Em:AI370669 Em:AI572844 Em:AI694583 Em:AI798375 Em:AI915170 FT Em:AV599549 Em:AV686080 Em:AV687194 Em:AV688306 Em:AV690156 FT Em:AV691659 Em:AV692398 Em:AV695042 Em:AW181892 Em:AW261082 FT Em:AW270335 Em:AW293265 Em:AW369780 Em:AW517792 Em:AW524670 FT Em:AW660653 Em:AW762521 Em:AW771253 Em:AW771325 Em:AW780434 FT Em:AW800856 Em:AW841865 Em:AW879991 Em:AW883384 Em:AW885383 FT Em:AW885540 Em:AW885736 Em:AW885772 Em:AW888854 Em:AW889619 FT Em:AW892807 Em:AW892817 Em:AW900587 Em:AW900704 Em:AW945338 FT Em:AW993831 Em:BE002630 Em:BE005114 Em:BE018659 Em:BE149229 FT Em:BE163571 Em:BE170628 Em:BE171589 Em:BE174649 Em:BE175078 FT Em:BE178770 Em:BE180722 Em:BE270146 Em:BE465085 Em:BE480955 FT Em:BE564606 Em:BE564899 Em:BE567917 Em:BE569031 Em:BE569882 FT Em:BE613917 Em:BE614168 Em:BE673395 Em:BE707336 Em:BE709135 FT Em:BE728948 Em:BE770557 Em:BE778290 Em:BE781553 Em:BE825373 FT Em:BE825486 Em:BE827473 Em:BE827475 Em:BE881716 Em:BE895787 FT Em:BE915168 Em:BE916748 Em:BE926061 Em:C76063 Em:H17605 FT Em:N36515 Em:N47764 Em:R14833 Em:R19847 Em:R53708 Em:R57609 FT Em:R61585 Em:T06923 Em:T30742 Em:T64831 Em:T74089 Em:T93542 FT Em:W02300 Em:W30762 Em:W31490 Em:W37307 Em:W56397 FT Em:Z45548" FT /note="match: cDNAs: Em:AK001535 Em:AK007344 Em:AK021459 FT Em:AK024111 Em:AK054919 Em:AL050030 Em:J03802" FT mRNA join(26538639..26538702,26545355..26546482) FT /gene="HMGN4" FT /locus_tag="CTA-14H9.4-001" FT /product="high mobility group nucleosomal binding domain 4" FT /note="match: ESTs: Em:AA167647 Em:AA332859 Em:AA333731 FT Em:AA374619 Em:AI188394 Em:BE395083 Em:BE561698 Em:BE695844 FT Em:BE868838 Em:BE886387 Em:R17124 Em:R59853 Em:W47070 FT Em:W81623" FT /note="match: cDNAs: Em:AB037814 Em:M12623 Em:U88573 FT Em:U90549 Em:X12944" FT mRNA join(26538666..26538729,26540129..26540177) FT /gene="HMGN4" FT /locus_tag="CTA-14H9.4-002" FT /product="high mobility group nucleosomal binding domain 4" FT /note="match: ESTs: Em:AW673277 Em:BE886387" FT CDS 26545435..26545707 FT /gene="HMGN4" FT /locus_tag="CTA-14H9.4-001" FT /standard_name="OTTHUMP00000016171" FT /product="high mobility group nucleosomal binding domain 4" FT /note="match: proteins: Sw:O00479 Sw:P05204 Sw:P09602 FT Sw:P18437 Sw:P80272" FT /protein_id="CAC16803.1" FT /translation="MPKRKAKGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPRPKKAS FT AKKGEKLPKGRKGKADAGKDGNNPAKNRDASTLQSQKAEGTGDAK" FT polyA_site 26546482 FT misc_feature 26585843..26695218 FT /note="annotated region of clone" FT mRNA join(26597180..26597451,26598142..26598338, FT 26598493..26600278) FT /gene="ABT1" FT /locus_tag="RP11-457M11.1-001" FT /product="activator of basal transcription 1" FT /note="match: ESTs: Em:AA251245 Em:AA291877 Em:AA374416 FT Em:AA456757 Em:AA480934 Em:AA545504 Em:AA598460 Em:AA665706 FT Em:AA704343 Em:AA766622 Em:AA768535 Em:AA779853 Em:AA781979 FT Em:AA788983 Em:AA894779 Em:AA897258 Em:AA907132 Em:AI024581 FT Em:AI039229 Em:AI052615 Em:AI140797 Em:AI161070 Em:AI207160 FT Em:AI216468 Em:AI218606 Em:AI240992 Em:AI284982 Em:AI291612 FT Em:AI342532 Em:AI348057 Em:AI468953 Em:AI546876 Em:AI583692 FT Em:AI652353 Em:AI659897 Em:AI680079 Em:AV683724 Em:AV684914 FT Em:AV688095 Em:AV694214 Em:AV695335 Em:AV706212 Em:AV709157 FT Em:AV709188 Em:AW105661 Em:AW105717 Em:AW176573 Em:AW188691 FT Em:AW192909 Em:AW197408 Em:AW273179 Em:AW274148 Em:AW297681 FT Em:AW404226 Em:AW511977 Em:AW571475 Em:AW872764 Em:AW956006 FT Em:BE047077 Em:BE205848 Em:BE253452 Em:BE328097 Em:BE480604 FT Em:BE535577 Em:BE539978 Em:BE549695 Em:BE791940 Em:BE855807 FT Em:BE883880 Em:BE886015 Em:BE902788 Em:BE903383 Em:BF082753 FT Em:BF111304 Em:BF339268 Em:BF508295 Em:BF653943 Em:BF732358 FT Em:BF752293 Em:BF907052 Em:BF997452 Em:BG106466 Em:BG116237 FT Em:CNSLT0A82 Em:CNSLT0A8Y Em:CNSLT0C1F Em:CNSLT0CTR FT Em:CNSLT0CTS Em:CNSLT0CZP Em:CNSLT0OLS Em:CNSLT10FK FT Em:CNSLT10H1 Em:CNSLT12FI Em:CNSLT12PX Em:CNSLT18GA FT Em:CNSLT18L2 Em:CNSLT18LT Em:CNSLT1GY4 Em:CNSLT1H14 FT Em:CNSLT1HRJ Em:CNSLT1HXB Em:H38465 Em:N42098 Em:N62099 FT Em:N64689 Em:N64730 Em:N78331 Em:N80123 Em:N89957 Em:T87120 FT Em:W67571 Em:W67619" FT /note="match: cDNAs: Em:AB021860 Em:AB027258 Em:AK009557" FT CDS join(26597211..26597451,26598142..26598338, FT 26598493..26598873) FT /gene="ABT1" FT /locus_tag="RP11-457M11.1-001" FT /standard_name="OTTHUMP00000017935" FT /product="activator of basal transcription 1" FT /note="match: proteins: Sw:Q9QYL7 Sw:Q9ULW3" FT /protein_id="CAC40824.1" FT /translation="MEAEESEKAATEQEPLEGTEQTLDAEEEQEESEEAACGSKKRVVP FT GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYTKD FT YTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHLAFE FT RQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQELRA FT RKAARPGGRERARLATAQDKARSNKGLLARIFGAPPPSESMEGPSLVRDS" FT polyA_signal 26599350..26599355 FT polyA_site 26599370 FT polyA_site 26599375 FT polyA_site 26599377 FT polyA_signal 26600256..26600261 FT polyA_site 26600278 FT CDS complement(join(26630782..26631023,26631321..26632007)) FT /pseudo FT /locus_tag="RP11-457M11.4-001" FT /product="vomeronasal olfactory 1 receptor, chromosome 6-5 FT pseudogene (hs6V1-5p)" FT /note="match: proteins: Sw:Q5J3F6 Sw:Q5J3L7 Sw:Q5J3L7 FT Sw:Q9WUF1" FT polyA_site complement(26634611) FT polyA_signal complement(26634633..26634637) FT mRNA complement(join(26634611..26634855,26635794..26635859, FT 26636790..26637008)) FT /locus_tag="RP11-457M11.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:N45114 Em:N51465" FT polyA_site complement(26637541) FT polyA_signal complement(26637542..26637547) FT mRNA complement(join(26637541..26638956,26643887..26643956, FT 26658786..26658874,26659669..26659758)) FT /locus_tag="RP11-457M11.3-001" FT /product="novel zinc finger protein" FT /note="match: ESTs: Em:AA731303 Em:AA830009 Em:AA912418 FT Em:AI216113 Em:AI261903 Em:AI478526 Em:AI583141 Em:AI672442 FT Em:AI680871 Em:AI762003 Em:AW136380 Em:AW136919 Em:AW299852 FT Em:AW300401 Em:AW303418 Em:AW594691 Em:AW978401 FT Em:BF438267" FT mRNA complement(join(26637541..26638956,26643887..26643956, FT 26658786..26658874,26659005..26659079,26659669..26659758)) FT /locus_tag="RP11-457M11.3-002" FT /product="novel zinc finger protein" FT /note="match: ESTs: Em:AA731303" FT misc_feature 26695118 FT /note="Clone_right_end: RP11-457M11" FT misc_feature 26826750..26827028 FT /note="match: GSS: Em:AQ333735" FT misc_feature 26826775..26827028 FT /note="match: GSS: Em:AQ545930" FT misc_feature 26826780..26979555 FT /note="annotated region of clone" FT CDS complement(join(26846351..26846618,26851126..26851296, FT 26853140..26853224,26855744..26855828,26856790..26856977)) FT /pseudo FT /gene="GUSBL1" FT /locus_tag="RP11-239L20.1-001" FT /product="glucuronidase, beta-like 1" FT /note="match: proteins: Sw:O18835.1 Sw:O97524.1 Sw:P06760.1 FT Sw:P08236.1 Sw:Q4FAT7.1" FT CDS 26864126..26865739 FT /pseudo FT /locus_tag="RP11-239L20.2-001" FT /product="POM121 membrane glycoprotein-like 1 (rat) FT (POM121L1) pseudogene" FT /note="match: proteins: Sw:P52591 Tr:Q6UW61.1 Tr:Q9NTU6.1" FT CDS 26865674..26866556 FT /pseudo FT /locus_tag="RP11-239L20.3-001" FT /product="POM121 membrane glycoprotein-like 1 (rat) FT (POM121L1) pseudogene" FT /note="match: proteins: Sw:P52591.1 Tr:Q6UW61.1 FT Tr:Q9NTU6.1" FT CDS 26866490..26867376 FT /pseudo FT /locus_tag="RP11-239L20.4-001" FT /product="POM121 membrane glycoprotein-like 1 (rat) FT (POM121L1) pseudogene" FT /note="match: proteins: Sw:P52591.1 Tr:Q6UW61.1 FT Tr:Q9NTU6.1" FT CDS 26867311..26867986 FT /pseudo FT /locus_tag="RP11-239L20.5-001" FT /product="POM121 membrane glycoprotein-like 1 (rat) FT (POM121L1) pseudogene" FT /note="match: proteins: Sw:P52591.1 Tr:Q6UW61.1 FT Tr:Q9NTU6.1" FT CDS complement(join(26845700..26846614,26851122..26851296, FT 26853138..26853222,26856789..26856976,26892899..26892992)) FT /pseudo FT /gene="GUSBL1" FT /locus_tag="RP11-239L20.1-003" FT /product="glucuronidase, beta-like 1" FT CDS complement(join(26839263..26839358,26839903..26840029, FT 26846479..26846614,26851122..26851296,26853138..26853222, FT 26856789..26856976,26892899..26893054,26918865..26918938, FT 26924168..26924333)) FT /pseudo FT /gene="GUSBL1" FT /locus_tag="RP11-239L20.1-002" FT /product="glucuronidase, beta-like 1" FT CDS complement(join(26846102..26846194,26846479..26846614, FT 26851122..26851296,26853138..26853222,26856789..26856976, FT 26892899..26893054,26894517..26894550,26924168..26924270)) FT /pseudo FT /gene="GUSBL1" FT /locus_tag="RP11-239L20.1-004" FT /product="glucuronidase, beta-like 1" FT CDS complement(join(26851121..26851296,26853138..26853222, FT 26856789..26856976,26892899..26893054,26894517..26894550, FT 26918865..26918938,26924168..26924271)) FT /pseudo FT /gene="GUSBL1" FT /locus_tag="RP11-239L20.1-005" FT /product="glucuronidase, beta-like 1" FT misc_feature 26979549 FT /note="Clone_right_end: RP11-239L20" FT misc_feature 26979556..27044574 FT /note="annotated region of clone" FT mRNA join(26988232..26988434,26991033..26991176, FT 26991544..26991703) FT /locus_tag="RP11-373D17.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI208304 Em:AI640588 Em:BE673560" FT mRNA join(26988415..26988434,26991033..26991176, FT 26991529..26991703) FT /locus_tag="RP11-373D17.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AW013982 Em:AW182240" FT polyA_signal 26991682..26991687 FT polyA_site 26991703 FT CDS complement(27001214..27002089) FT /pseudo FT /locus_tag="RP11-373D17.2-001" FT /product="vomeronasal olfactory 1 receptor, chromosome 6-3 FT pseudogene (hs6V1-3p)" FT /note="match: proteins: Sw:Q5J3F6 Sw:Q5J3K5 Sw:Q5J3L6 FT Sw:Q5J3L7 Sw:Q5J3M3 Sw:Q5J3M9 Sw:Q5J3N1 Sw:Q62850 Sw:Q8VIC6 FT Sw:Q8VIC7" FT CDS complement(27028144..27029028) FT /pseudo FT /locus_tag="RP11-373D17.3-001" FT /product="vomeronasal olfactory 1 receptor, chromosome 6-4 FT pseudogene (hs6V1-4p)" FT /note="match: proteins: Sw:Q5J3F6 Sw:Q5J3K5 Sw:Q5J3L6 FT Sw:Q5J3L7 Sw:Q5J3M3 Sw:Q5J3N1 Sw:Q62850 Sw:Q8VIC6 Sw:Q8VIC7 FT Sw:Q9WUF1" FT misc_feature 27044375 FT /note="Clone_left_end: RP1-86C11" FT misc_feature 27044575..27133490 FT /note="annotated region of clone" FT CDS 27051059..27051926 FT /pseudo FT /locus_tag="RP1-86C11.1-001" FT /product="vomeronasal olfactory 1 receptor, chromosome 6-2 FT pseudogene (hs6V1-2p)" FT /note="match: proteins: Sw:Q5J3F6 Sw:Q5J3K5 Sw:Q5J3L6 FT Sw:Q5J3L7 Sw:Q5J3M3 Sw:Q5J3M9 Sw:Q5J3N1 Sw:Q62850 Sw:Q8VIC6 FT Sw:Q8VIC7 Sw:Q9WUF1" FT misc_feature 27068228..27068446 FT /note="Tandem repeat . Single clone region" FT misc_feature 27068351..27068353 FT /note="Forced join . EcoRI digest + PCR analysis suggest FT gap is approx. 150BP" FT mRNA complement(27100149..27100529) FT /gene="HIST1H2BJ" FT /locus_tag="RP1-86C11.3-001" FT /product="histone cluster 1, H2bj" FT /note="match: ESTs: Em:R11289" FT /note="match: cDNAs: Em:AL050291" FT CDS complement(27100149..27100529) FT /gene="HIST1H2BJ" FT /locus_tag="RP1-86C11.3-001" FT /standard_name="OTTHUMP00000016175" FT /product="histone cluster 1, H2bj" FT /note="match: proteins: Sw:O65818 Sw:P02281 Sw:P02293 FT Sw:P02294 Sw:P06899 Sw:P06900 Sw:P0C1H5 Sw:P14001 Sw:P21897 FT Sw:P23527 Sw:P33778 Sw:P69070 Sw:Q00729 Sw:Q16778 Sw:Q43216 FT Tr:Q43371 Tr:Q90860" FT /protein_id="CAA16949.1" FT /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSAK" FT mRNA 27100821..27103070 FT /gene="RP1-86C11.5" FT /locus_tag="RP1-86C11.5-001" FT /product="H2A histone family, member A" FT /note="match: cDNAs: Em:AF151534 Em:AK001765 Em:AL080138 FT Em:AL133626 Em:D17015 Em:L19778 Em:L19779 Em:M86381 FT Em:U70133 Em:U90545 Em:U90551 Em:V00414 Em:X58069 Em:Y00392 FT Em:Z30940" FT /note="match: ESTs: Em:AA008265 Em:AA035804 Em:AA041629 FT Em:AA049971 Em:AA051307 Em:AA061971 Em:AA072065 Em:AA073767 FT Em:AA097283 Em:AA231513 Em:AA245376 Em:AA271048 Em:AA407651 FT Em:AA407898 Em:AA409282 Em:AA412229 Em:AA412942 Em:AA419197 FT Em:AA426351 Em:AA492640 Em:AA528953 Em:AA554661 Em:AA596369 FT Em:Aa674867 Em:AA756304 Em:AA770688 Em:AA801164 Em:AA874213 FT Em:AA924653 Em:AA939581 Em:AA966962 Em:AA981742 Em:AA996479 FT Em:AI045749 Em:AI048001 Em:AI059542 Em:AI137846 Em:AI154977 FT Em:AI427758 Em:AI661606 Em:AW024809 Em:AW371540 Em:H15508 FT Em:H15876 Em:W11262 Em:W41535 Em:W54514 Em:W61749 Em:W62557 FT Em:W62644 Em:W64007 Em:W88216 Em:W91024" FT CDS 27100851..27101243 FT /gene="RP1-86C11.5" FT /locus_tag="RP1-86C11.5-001" FT /standard_name="OTTHUMP00000016174" FT /product="H2A histone family, member A" FT /note="match: proteins: Sw:P02262 Sw:P02263 Sw:P04908 FT Sw:P0C0S9 Sw:P13912 Sw:P20671 Sw:P22752 Sw:P28001 Sw:P40282 FT Sw:Q00728 Sw:Q16777 Sw:Q64522 Sw:Q6GSS7 Sw:Q9QY14 Tr:P91960 FT Tr:Q29579 Tr:Q92064 Tr:Q9NV63" FT /protein_id="CAA16948.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT polyA_signal 27103048..27103053 FT polyA_site 27103070 FT mRNA 27106367..27107660 FT /gene="HIST1H4I" FT /locus_tag="RP1-86C11.2-001" FT /product="histone 1, H4i" FT /note="match: ESTs: Em:AA010078 Em:AA022289 Em:AA028777 FT Em:AA031551 Em:AA097998 Em:AA280257 Em:AA281599 Em:AA286932 FT Em:AA286933 Em:AA405358 Em:AA507431 Em:AA527987 Em:AA541589 FT Em:AA627212 Em:AA642479 Em:AA702915 Em:AA724505 Em:AA754064 FT Em:AA810155 Em:AA848573 Em:AA872647 Em:AA956968 Em:AA973821 FT Em:AI012138 Em:AI034336 Em:AI138510 Em:AI161091 Em:AI193203 FT Em:AI302266 Em:AI326860 Em:AI340351 Em:AI346420 Em:AI395924 FT Em:AI560438 Em:AI668477 Em:AI697405 Em:AI720740 Em:AI904196 FT Em:AI937062 Em:AI961342 Em:AU019031 Em:AU030231 Em:AU031493 FT Em:AU082910 Em:AU092635 Em:AU093170 Em:AU093175 Em:AU095021 FT Em:AU095547 Em:AU108352 Em:AU108737 Em:AU163098 Em:AU164785 FT Em:AU166172 Em:AW022049 Em:AW076452 Em:AW179364 Em:AW288541 FT Em:AW404382 Em:AW468243 Em:AW506659 Em:AW519968 Em:AW520490 FT Em:AW600436 Em:AW673052 Em:AW675286 Em:AW798170 Em:AW879006 FT Em:AW881301 Em:AW883541 Em:AW923771 Em:BE001465 Em:BE039917 FT Em:BE040015 Em:BE071541 Em:BE186768 Em:BE344782 Em:BE358874 FT Em:BE415832 Em:BE415858 Em:BE416188 Em:BE416307 Em:BE416319 FT Em:BE416357 Em:BE416451 Em:BE417097 Em:BE417161 Em:BE417198 FT Em:BE417888 Em:BE424657 Em:BE510938 Em:BE512406 Em:BE518708 FT Em:BE518834 Em:BE548766 Em:BE622317 Em:BE638720 Em:BE639451 FT Em:BE640337 Em:BE774855 Em:BE826302 Em:BE856413 Em:BE887761 FT Em:BE892691 Em:BE897728 Em:BE898451 Em:BE907618 Em:BE973853 FT Em:BF002473 Em:BF025823 Em:BF030735 Em:BF036118 Em:BF038937 FT Em:BF095824 Em:BF095894 Em:BF095943 Em:BF175931 Em:BF189512 FT Em:BF189522 Em:BF209659 Em:BF210352 Em:BF259003 Em:BF344622 FT Em:BF438572 Em:BF573931 Em:BF680112 Em:BF686467 Em:BF817098 FT Em:BF939701 Em:BG027654 Em:BG069452 Em:BG112051 Em:BG113317 FT Em:BG115789 Em:BG122977 Em:BG266126 Em:BG266531 Em:BG330304 FT Em:C26941 Em:C97029 Em:C98155 Em:C98314 Em:C98353 FT Em:CNSLT07CI Em:CNSLT07CJ Em:H99769 Em:N21314 Em:N22907 FT Em:N31296 Em:N42055 Em:R01621 Em:R01622 Em:W19956 FT Em:W65951" FT /note="match: cDNAs: Em:AF001288 Em:AF008301 Em:AF086564 FT Em:AJ223352 Em:AK007642 Em:AK010085 Em:AK011560 Em:AK016178 FT Em:AK016310 Em:BC000893 Em:J00985 Em:J00986 Em:J00988 FT Em:J00989" FT CDS 27107088..27107399 FT /gene="HIST1H4I" FT /locus_tag="RP1-86C11.2-001" FT /standard_name="OTTHUMP00000016176" FT /product="histone 1, H4i" FT /note="match: proteins: Sw:P04915 Sw:P27996 Sw:P35057 FT Sw:P35059 Sw:P50566 Sw:P62783 Sw:P62788 Sw:P62799 Sw:P84045 FT Sw:Q27443 Tr:P91878" FT /protein_id="CAA16946.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT mRNA complement(27114197..27114577) FT /gene="HIST1H2BK" FT /locus_tag="RP1-86C11.6-001" FT /product="histone cluster 1, H2bk" FT /note="match: ESTs: Em:AA217829 Em:AA327803 Em:AA396588 FT Em:AA493023 Em:AA822287 Em:AI016731 Em:AI033793 Em:AI326278 FT Em:AI688098" FT /note="match: cDNAs: Em:M25487 Em:M60756" FT CDS complement(27114197..27114577) FT /gene="HIST1H2BK" FT /locus_tag="RP1-86C11.6-001" FT /standard_name="OTTHUMP00000016177" FT /product="histone cluster 1, H2bk" FT /note="match: proteins: Sw:P10853 Sw:P10854 Sw:P57053 FT Sw:P62807 Sw:P62808 Sw:Q93079 Sw:Q99877 Sw:Q99879 Sw:Q99880 FT Tr:Q90859 Tr:Q9Z2Q9 Tr:Q9Z2R0" FT /protein_id="CAA16945.1" FT /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSAK" FT mRNA 27114908..27115294 FT /locus_tag="RP1-86C11.4-001" FT /product="novel protein identical to H2A histone family, FT member I (H2AFI)" FT /note="match: cDNAs: Em:AF044286 Em:AF054174 Em:AF171080 FT Em:M99065 Em:U79139 Em:X14850" FT /note="match: ESTs: Em:AA027719 Em:AA028489 Em:Aa402261 FT Em:AA404737 Em:AA425209 Em:AA448350 Em:AA481173 Em:AA896466 FT Em:AI749820 Em:AI836520" FT CDS 27114908..27115294 FT /locus_tag="RP1-86C11.4-001" FT /standard_name="OTTHUMP00000016173" FT /product="novel protein identical to H2A histone family, FT member I (H2AFI)" FT /note="match: proteins: Sw:O74268 Sw:P02273 Sw:P02274 FT Sw:P25470 Sw:P35063 Sw:P35064 Sw:P35065 Tr:Q9S994" FT /protein_id="CAA16944.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKAK" FT misc_feature 27133390 FT /note="Clone_right_end: RP1-86C11" FT misc_feature 27133491..27182651 FT /note="annotated region of clone" FT CDS 27179023..27179663 FT /pseudo FT /locus_tag="RP11-209A2.1-001" FT /product="60S ribosomal protein L10 (RPL10) pseudogene" FT /note="match: proteins: Sw:O22431 Sw:O61231 Sw:O96647 FT Sw:P27635 Sw:P41805 Sw:P45633 Sw:P45635 Sw:P45635 Sw:P45636 FT Sw:P93847 Sw:Q08200 Sw:Q08770 Sw:Q08770 Sw:Q09127 Sw:Q09533 FT Sw:Q29195 Sw:Q39724 Sw:Q6PDV7 Tr:Q08018" FT misc_feature 27182452 FT /note="Clone_left_end: XXbac-24O18" FT misc_feature 27182652..27336617 FT /note="annotated region of clone" FT unsure 27200581 FT /note="G or GT" FT unsure 27200583 FT /note="A or T" FT unsure 27203283 FT /note="reads C or A" FT mRNA join(27215508..27215586,27215661..27215827, FT 27216626..27216725,27216879..27217008,27218399..27218603, FT 27218821..27218898,27218996..27219043,27219529..27219819, FT 27220587..27220728,27222472..27222651,27222765..27222910, FT 27223026..27224348) FT /gene="PRSS16" FT /locus_tag="XXbac-BPG24O18.5-001" FT /product="protease, serine, 16 (thymus)" FT /note="match: ESTs: Em:AA442198 Em:N91380 Em:W20042" FT /note="match: cDNAs: Em:AF052514" FT CDS join(27215517..27215586,27215661..27215827, FT 27216626..27216725,27216879..27217008,27218399..27218603, FT 27218821..27218898,27218996..27219043,27219529..27219819, FT 27220587..27220728,27222472..27222651,27222765..27222910, FT 27223026..27223094) FT /gene="PRSS16" FT /locus_tag="XXbac-BPG24O18.5-001" FT /standard_name="OTTHUMP00000017777" FT /product="protease, serine, 16 (thymus)" FT /note="match: proteins: Em:CE00272 Em:CE00464 Sw:P42785 FT Sw:Q9NQE7 Tr:O65511" FT /protein_id="CAB94769.1" FT /translation="MAVWLAQWLGPLLLVSLWGLLAPASLLRRLGEHIQQFQESSAQGL FT GLSLGPGAAALPKVGWLEQLLDPFNVSDRRSFLQRYWVNDQHWVGQDGPIFLHLGGEGS FT LGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQLRFLSSRLAMGKSSGI FT PSDEDRPSPPFDPRLADVVSARLALSRLFNISSSSPWICFGGSYAGSLAAWARLKVLRL FT LRFPHLIFASVASSAPVRAVLDFSEYNDVVSRSLMSTAIGGSLECRAAVSVAFAEVERR FT LRSGGAAQAALRTELSACGPLGRAENQAELLGALQALVGGVVQYDGQTGAPLSVRQLCG FT LLLGGGGNRSHSTPYCGLRRAVQIVLHSLGQKCLSFSRAETVAQLRSTEPQLSGVGDRQ FT WLYQTCTEFGFYVTCENPRCPFSQLPALPSQLDLCEQVFGLSALSVAQAVAQTNSYYGG FT QTPGANKVLFVNGDTDPWHVLSVTQALGSSESTLLIRTGSHCLDMAPERPSDSPSLRLG FT RQNIFQQLQTWLKLAKESQIKGEV" FT misc_feature 27230138..27230211 FT /note="Single clone region" FT mRNA complement(join(27276832..27278683,27278876..27280001)) FT /gene="POM121L2" FT /locus_tag="XXbac-BPG24O18.2-001" FT /product="POM121 membrane glycoprotein-like 2 (rat)" FT /note="match: ESTs: Em:AI017213" FT /note="match: cDNAs: Em:AB014518 Em:L40517 Em:L77571 FT Em:M24895 Em:U10099 Em:U21556 Em:Z21513 Em:Z70703 FT Em:Z70717" FT CDS complement(join(27276842..27278683,27278876..27279949)) FT /gene="POM121L2" FT /locus_tag="XXbac-BPG24O18.2-001" FT /standard_name="OTTHUMP00000016178" FT /product="POM121 membrane glycoprotein-like 2 (rat)" FT /note="match: proteins: Sw:P52591 Sw:Q9Y2N3" FT /protein_id="CAB36861.1" FT /translation="MGSFLSKLELSPSSPAQVRTDLPERPTKRRPPQPLHQVHRVQFVH FT RAHPAPRYRPVRRRPNLDPANPTTWLANEAWRRFPMKKSQNSPLGPLPSDWWESYLKRT FT IWSLRHPRPIWSPVTIRITPPDQRVPPSTSPEDVIALAGLPPSEELADPCSKETVLRAL FT RECRKGKGRLEEPLFPESLDSKRRSPETRPSAFKPLMKNGTLTSFVPRPGPLKRSLHSW FT GSDHSLTKRPNCSSMSSLASIYRGGTLSSKRNAIGSSYSSCRNFSDPWKRSVPSVSFET FT PEWPIKKEKSCHRPSSPVPLVSDFESLGGSESSGQQNQKIPQLPSSPENLVSEIPPPQL FT GYAVSDENLTLGKKAELQSTGEATSVAHSPLKTPSLPTPPGCSQSELLPGTSPDSKPTA FT TFILLTPTSPTLPVTDTTWPPSTSQADRSPMPPDPPAPPTIQSTLLGMVSSPTSHLSAS FT APPDATSAHLMLKPILGPLHNSEIGSSSYSRISVTAAASSISSLSTIQGTLTPTFKPIF FT GSIDPLKTTPMIAPFSSKQTPPPFTHASTHHFHGLVKATSVVMSTTLASTSKDSVFKPP FT LDFGVVNVTSAVGNTYSVPSTCDTFLLGTAQAFRADFTPATGFIFPPHHHPTIPTVHTV FT TMFTQVLSSVVQISPRSSTANFRGMGSPLPASALVSTNWLASTPSISNLTPAITSPLGS FT SSRPPFPLSQGANPQPAFGATNGQKQGPSQPALMPSVSSSFLFGSSAVALPTPMPTPAQ FT PAFISTTQSALGCLTPSASTSQTPASTWSGIGGIPAGFPISQASTTGFRIVIQTHQSGA FT FGSVFGSRAPQPFTFGGFVTPMDCDESGIIMTGPDMSPTSGAFSIGALPSGTTNTMIPF FT GKGWSQNTEGLPSHRTAFSLGRGSISARKTMAPIAQNTPVPGQAKAGSSVGFGMPFPPA FT QGSVGRGPFRSSASSFSIGAKSKTPKNREKGHSRRHHAYKK" FT CDS 27292673..27293547 FT /pseudo FT /locus_tag="XXbac-BPG24O18.3-001" FT /product="vomeronasal olfactory 1 receptor, chromosome 6-1 FT pseudogene (hs6V1-1p)" FT /note="match: proteins: Sw:Q5J3F6 Sw:Q5J3K5 Sw:Q5J3L6 FT Sw:Q5J3L7 Sw:Q5J3M3 Sw:Q5J3M9 Sw:Q62850" FT CDS complement(<27325604..>27328000) FT /pseudo FT /locus_tag="XXbac-BPG24O18.1-001" FT /product="zinc finger protein pseudogene" FT /note="match: proteins: Em:CE16599 Sw:O43167 Sw:O43345 FT Sw:O43830 Sw:O60765 Sw:O75123 Sw:O75820 Sw:O75820 Sw:P08045 FT Sw:P10076 Sw:P13682 Sw:P15822 Sw:P18739 Sw:P18751 Sw:P18753 FT Sw:P21506 Sw:P51508 Sw:P51522 Sw:P51523 Sw:P51786 Sw:P51814 FT Sw:P52738 Sw:P52742 Sw:Q02975 Sw:Q03923 Sw:Q07230 Sw:Q13398 FT Sw:Q14585 Sw:Q14586 Sw:Q14587 Sw:Q14929 Sw:Q15776 Sw:Q16587 FT Sw:Q16600 Sw:Q61116 Sw:Q61751 Sw:Q62513 Sw:Q62981 Sw:Q99676 FT Sw:Q99676 Tr:O14845 Tr:O43339 Tr:P70591 Tr:Q62512 FT Tr:Q62886" FT misc_feature 27336517 FT /note="Clone_right_end: XXbac-24O18" FT misc_feature 27336618..27418972 FT /note="annotated region of clone" FT mRNA complement(join(27418599..27418972,AL021918.1:102..2168, FT AL021918.1:5734..5829,AL021918.1:6191..6317, FT AL021918.1:16761..16828,AL021918.1:21196..21341, FT AL021918.1:21569..21589)) FT /gene="ZNF184" FT /locus_tag="XXbac-BPG34I8.4-001" FT /product="zinc finger protein 184" FT /note="match: cDNAs: Em:AF033199 Em:AF116030 Em:AK000580 FT Em:AK010575 Em:AL137241 Em:BC005068 Em:D89928 Em:M29581 FT Em:U66561 Em:X52332 Em:X52533 Em:X60152 Em:X60154 Em:X60155 FT Em:X64413 Em:X79828 Em:X89264" FT /note="match: ESTs: Em:AA160473 Em:Aa160639 Em:AA355479 FT Em:AA455657 Em:AA723097 Em:AA732097 Em:AA830689 Em:AA832398 FT Em:AI139121 Em:AI139471 Em:AI275409 Em:AI335776 Em:AI554833 FT Em:AI587600 Em:AI718928 Em:AU130244 Em:BE268775 Em:BF727461 FT Em:D19825 Em:H89600 Em:N39140 Em:N59184 Em:N78795 Em:R39073 FT Em:W05057" FT mRNA <27368231..27369226 FT /locus_tag="RP1-153G14.3-001" FT /product="novel C2H2 type Zinc Finger protein" FT /note="match: ESTs: Em:AA905889" FT /note="match: cDNAs: Em:AB011414 Em:AB014528 Em:AB018341 FT Em:AB023178 Em:AB023189 Em:AB023232 Em:AB024004 Em:AB024005 FT Em:AF011573 Em:AF022158 Em:AF024693 Em:AF025770 Em:AF033199 FT Em:AF067164 Em:AF067165 Em:AF086368 Em:AF116030 Em:AF149093 FT Em:AF153201 Em:D70831 Em:D88827 Em:D89928 Em:M27878 FT Em:M29580 Em:U09411 Em:U09848 Em:U35376 Em:U65897 Em:U65898 FT Em:U75454 Em:U80232 Em:U95991 Em:U95992 Em:X06021 Em:X07289 FT Em:X52533 Em:X64413 Em:X78925 Em:X78926 Em:X78932 Em:X78933 FT Em:X89264 Em:Y00850" FT CDS <27368231..27369226 FT /codon_start=1 FT /locus_tag="RP1-153G14.3-001" FT /standard_name="OTTHUMP00000016180" FT /product="novel C2H2 type Zinc Finger protein" FT /note="match: proteins: Sw:P08043 Sw:P10078 Sw:P15620 FT Sw:P17141 Sw:P18753 Sw:P51523 Sw:P52740 Sw:P52742 Sw:Q02975 FT Sw:Q03309 Sw:Q06730 Sw:Q07230 Sw:Q13398 Sw:Q14587 Sw:Q61116 FT Sw:Q61751 Sw:Q61967 Sw:Q8C827 Sw:Q99676 Tr:O43340 Tr:Q62512 FT Tr:Q62886" FT /protein_id="CAB51755.1" FT /translation="TKCPAQKKSSFENTVVRKVSVTLKEIFTGEEGPESSEFSLSPNLD FT AQQKIPKGHGSPISRKNSKDNSDLIKHQRLFSQRKPCKCNECEKAFSYQSDLLVHSRIH FT GGEKPFECNKCGKSFSRSTHLIEHQRTHTGEKPYECNECGKAFSRSTHLSLHQRIHTGE FT KPYECSECGKAFSRSTNLSQHQRTHTQERPYKCNECGKAFGDRSTIIQHQRIHTGENPY FT ECSKCGKAFSWISSLTEHQRTHTGENPYECSECGKVFSRSSSLTEHQRIHSGEKPHECR FT VCGKGFSRSSSLIIHQRTHTGEKPYKCNDCGKAFCQSSTLIRHQHLHTKE" FT CDS 27375476..27375775 FT /pseudo FT /locus_tag="RP1-153G14.2-001" FT /product="pseudogene similar to part of multiple FT coagulation factor deficiency 2 (MCFD2)" FT /note="match: proteins: Sw:Q5R8Z6.1 Sw:Q8K5B2.1 Sw:Q8K5B3.1 FT Sw:Q8NI22.1" FT misc_feature 27418772 FT /note="Clone_left_end: XXbac-34I8" FT misc_feature 27418973..27578377 FT /note="annotated region of clone" FT CDS complement(join(27419082..27421039,27424605..27424700, FT 27425062..27425188,27435632..27435699,27440067..27440073)) FT /gene="ZNF184" FT /locus_tag="XXbac-BPG34I8.4-001" FT /standard_name="OTTHUMP00000016181" FT /product="zinc finger protein 184" FT /note="match: proteins: Sw:P51814 Sw:Q61967 Sw:Q99676 FT Sw:Q99676 Tr:O75261 Tr:Q9Y2N9" FT /protein_id="CAA17278.1" FT /translation="MEDLSSPDSTLLQGGHNLLSSASFQEAVTFKDVIVDFTQEEWKQL FT DPGQRDLFRDVTLENYTHLVSIGLQVSKPDVISQLEQGTEPWIMEPSIPVGTCADWETR FT LENSVSAPEPDISEEELSPEVIVEKHKRDDSWSSNLLESWEYEGSLERQQANQQTLPKE FT IKVTEKTIPSWEKGPVNNEFGKSVNVSSNLVTQEPSPEETSTKRSIKQNSNPVKKEKSC FT KCNECGKAFSYCSALIRHQRTHTGEKPYKCNECEKAFSRSENLINHQRIHTGDKPYKCD FT QCGKGFIEGPSLTQHQRIHTGEKPYKCDECGKAFSQRTHLVQHQRIHTGEKPYTCNECG FT KAFSQRGHFMEHQKIHTGEKPFKCDECDKTFTRSTHLTQHQKIHTGEKTYKCNECGKAF FT NGPSTFIRHHMIHTGEKPYECNECGKAFSQHSNLTQHQKTHTGEKPYDCAECGKSFSYW FT SSLAQHLKIHTGEKPYKCNECGKAFSYCSSLTQHRRIHTREKPFECSECGKAFSYLSNL FT NQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTGEKPYQCHECGKTFSYGSSLIQH FT RKIHTGERPYKCNECGRAFNQNIHLTQHKRIHTGAKPYECAECGKAFRHCSSLAQHQKT FT HTEEKPYQCNKCEKTFSQSSHLTQHQRIHTGEKPYKCNECDKAFSRSTHLTEHQNTHTG FT EKPYNCNECRKTFSQSTYLIQHQRIHSGEKPFGCNDCGKSFRYRSALNKHQRLHPGI" FT mRNA complement(join(AL031118.22:82083..82456, FT 27418973..27421039,27424605..27424700,27425062..27425188, FT 27435632..27435699,27440067..27440212,27440440..27440460)) FT /gene="ZNF184" FT /locus_tag="XXbac-BPG34I8.4-001" FT /product="zinc finger protein 184" FT /note="match: cDNAs: Em:AF033199 Em:AF116030 Em:AK000580 FT Em:AK010575 Em:AL137241 Em:BC005068 Em:D89928 Em:M29581 FT Em:U66561 Em:X52332 Em:X52533 Em:X60152 Em:X60154 Em:X60155 FT Em:X64413 Em:X79828 Em:X89264" FT /note="match: ESTs: Em:AA160473 Em:Aa160639 Em:AA355479 FT Em:AA455657 Em:AA723097 Em:AA732097 Em:AA830689 Em:AA832398 FT Em:AI139121 Em:AI139471 Em:AI275409 Em:AI335776 Em:AI554833 FT Em:AI587600 Em:AI718928 Em:AU130244 Em:BE268775 Em:BF727461 FT Em:D19825 Em:H89600 Em:N39140 Em:N59184 Em:N78795 Em:R39073 FT Em:W05057" FT CDS join(27490855..27490905,27491227..27492118) FT /pseudo FT /locus_tag="XXbac-BPG34I8.2-001" FT /product="heterogeneous nuclear ribonucleoprotein A1 FT (HNRPA1) pseudogene" FT /note="match: proteins: Em:CE17059 Sw:P04256 Sw:P09651 FT Sw:P09867 Sw:P17130 Sw:P21522 Sw:P22626 Sw:P49312 Sw:P51968 FT Sw:P51989 Sw:P51990 Sw:P51991 Sw:P51992 Sw:Q13151 FT Sw:Q28521" FT CDS complement(join(27528602..27528788,27529140..27529523)) FT /pseudo FT /locus_tag="XXbac-BPG34I8.3-001" FT /product="CD83 antigen (activated B lymphocytes, FT immunoglobulin superfamily) pseudogene" FT /note="match: proteins: Sw:Q01151 Tr:O88324 Tr:Q9JJA6" FT misc_feature 27578378..27639727 FT /note="annotated region of clone" FT misc_feature 27583711..27583715 FT /note="Is2 transposon deleted from here" FT CDS complement(27620379..27620604) FT /pseudo FT /locus_tag="RP1-15D7.1-001" FT /product="60S ribosomal protein L8 (RPL8) pseudogene" FT /note="match: proteins: Sw:O26113 Sw:O28357 Sw:P05736 FT Sw:P08093 Sw:P08093 Sw:P20276 Sw:P21479 Sw:P25998 Sw:P29766 FT Sw:P41116 Sw:P41569 Sw:P46286 Sw:P54017 Sw:P62919 Sw:Q42064 FT Sw:Q9U9L2 Sw:Q9UXA5 Sw:Q9V3G1 Sw:Q9XVF7 Sw:Q9YFN1 Tr:O61666 FT Tr:Q95299 Tr:Q9LLS6 Tr:Q9XFV0 Tr:Q9YFN2" FT misc_feature 27639531 FT /note="Clone_right_end: RP1-97D16" FT misc_feature 27639728..27779531 FT /note="annotated region of clone" FT CDS complement(27704354..27706273) FT /pseudo FT /locus_tag="RP1-97D16.1-002" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q9Y302 Tr:Q17912 Tr:Q9T087 FT Tr:Q9U1S3 Tr:Q9V792 Tr:Q9XIP7" FT CDS complement(27748399..27748890) FT /pseudo FT /locus_tag="RP1-97D16.4-001" FT /product="60S Ribosomal protein L30 (RPL30) pseudogene" FT /note="match: proteins: Sw:O22165 Sw:O26357 Sw:O29492 FT Sw:P04449 Sw:P14116 Sw:P24000 Sw:P38665 Sw:P38666 Sw:P50888 FT Sw:P54064 Sw:P83732 Sw:Q07915 Sw:Q10353 Sw:Q92354" FT CDS 27774836..27775114 FT /pseudo FT /locus_tag="RP1-97D16.6-001" FT /product="histone 1, H4, pseudogene 1" FT /note="match: proteins: Em:CE03252 Sw:P08436 Sw:P35057 FT Sw:P35059 Sw:P62788 Sw:P62792 Sw:P62799 Sw:P84045" FT mRNA complement(27775222..27775709) FT /gene="HIST1H2BL" FT /locus_tag="RP1-97D16.2-001" FT /product="histone cluster 1, H2bl" FT /note="match: ESTs: Em:AA031551 Em:AA053984 Em:AA064568 FT Em:AA080125 Em:AA089022 Em:AA169623 Em:AA217829 Em:AA256738 FT Em:AA280257 Em:AA286932 Em:AA286933 Em:AA315768 Em:AA389204 FT Em:AA396588 Em:AA493023 Em:AA493453 Em:AA507431 Em:AA527987 FT Em:AA555857 Em:AA557199 Em:AA557205 Em:AA562098 Em:AA654491 FT Em:AA724505 Em:AA812462 Em:AA822287 Em:AA828449 Em:AA873858 FT Em:AA963974 Em:AA964055 Em:H70774 Em:N29733 Em:N31249 FT Em:N42055 Em:R11289 Em:T27838 Em:W41523 Em:W49399 Em:W71872 FT Em:W81985" FT /note="match: cDNAs: Em:M18045 Em:M18046 Em:M25487 FT Em:M60756" FT CDS complement(27775304..27775684) FT /gene="HIST1H2BL" FT /locus_tag="RP1-97D16.2-001" FT /standard_name="OTTHUMP00000016184" FT /product="histone cluster 1, H2bl" FT /note="match: proteins: Sw:P02281 Sw:P06900 Sw:P0C1H5 FT Sw:P10853 Sw:P10854 Sw:P14001 Sw:P23527 Sw:P33778 Sw:P62808 FT Sw:Q64524 Sw:Q8CGP2" FT /protein_id="CAA15668.1" FT /translation="MPELAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT mRNA 27775977..27776479 FT /gene="HIST1H2AI" FT /locus_tag="RP1-97D16.3-001" FT /product="histone 1, H2ai" FT /note="match: ESTs: Em:AA061654 Em:AA072068 Em:AA073767 FT Em:AA197824 Em:AA562397 Em:W91024" FT /note="match: cDNAs: Em:BC001193 Em:L19779 Em:U70133 FT Em:U90551 Em:X58069" FT CDS 27775988..27776380 FT /gene="HIST1H2AI" FT /locus_tag="RP1-97D16.3-001" FT /standard_name="OTTHUMP00000016183" FT /product="histone 1, H2ai" FT /note="match: proteins: Sw:P02263 Sw:P04908 Sw:P0C0S9 FT Sw:P20671 Sw:P22752 Sw:P22752 Sw:P28001 Sw:Q00728 Sw:Q64522 FT Sw:Q6GSS7" FT /protein_id="CAA15669.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT mRNA 27777842..27779078 FT /gene="HIST1H3H" FT /locus_tag="RP1-97D16.5-001" FT /product="histone 1, H3h" FT /note="match: ESTs: Em:AA126508 Em:AA271048 Em:AA309059 FT Em:AA513788 Em:AA626536 Em:AA779995 Em:C27226 Em:T01428 FT Em:U81560 Em:W48290" FT /note="match: cDNAs: Em:D17021 Em:L19778 Em:M11353 FT Em:M11354 Em:X13605 Em:X51897 Em:X73683 Em:X91866 Em:Y00392 FT Em:Z85979" FT CDS 27777852..27778262 FT /gene="HIST1H3H" FT /locus_tag="RP1-97D16.5-001" FT /standard_name="OTTHUMP00000016182" FT /product="histone 1, H3h" FT /note="match: proteins: Em:CE03253 Em:CE10540 Sw:P68433 FT Sw:P69079 Sw:P84232 Sw:Q16695" FT /protein_id="CAA15670.1" FT /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG FT TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGL FT FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" FT misc_feature 27779532..27804137 FT /note="annotated region of clone" FT mRNA complement(27782132..27782518) FT /gene="HIST1H2AJ" FT /locus_tag="RP1-160A22.3-001" FT /product="histone cluster 1, H2aj" FT /note="match: ESTs: Em:AA008265 Em:AA027719 Em:AA035804 FT Em:AA060372 Em:AA072068 Em:AA073767 Em:AA106230 Em:AA125160 FT Em:AA136886 Em:AA188780 Em:AA197824 Em:AA245376 Em:AA407651 FT Em:AA407898 Em:AA409282 Em:AA412942 Em:AA416963 Em:AA492640 FT Em:AA632084 Em:AA638318 Em:AA732974 Em:AA756304 Em:AA798932 FT Em:AA801164 Em:AA810905 Em:AA895993 Em:AA904029 Em:AA924653 FT Em:AA947684 Em:AA966962 Em:AA980724 Em:AI024179 Em:AI045749 FT Em:AI070981 Em:AI323883 Em:AI427758 Em:AI661442.1 FT Em:AI661606.1 Em:W11262 Em:W40792 Em:W62644 Em:W65215 FT Em:W78633 Em:W89373 Em:W91024" FT /note="match: cDNAs: Em:AF030235 Em:AF044286 Em:AF054174 FT Em:AF171080 Em:AL133626 Em:D17015 Em:L19778 Em:L19779 FT Em:M99065 Em:U70133 Em:U79139 Em:U90545 Em:U90551 Em:X14850 FT Em:X58069 Em:Z30940" FT CDS complement(27782132..27782518) FT /gene="HIST1H2AJ" FT /locus_tag="RP1-160A22.3-001" FT /standard_name="OTTHUMP00000016185" FT /product="histone cluster 1, H2aj" FT /note="match: proteins: Sw:P02262 Sw:P02263 Sw:P04908 FT Sw:P0C0S9 Sw:P13912 Sw:P19177 Sw:P20671 Sw:P22752 Sw:P22752 FT Sw:P28001 Sw:P40282 Sw:Q00728 Sw:Q16777 Sw:Q64522 Sw:Q6GSS7 FT Tr:P91960 Tr:Q29579 Tr:Q92064 Tr:Q9Z2R1" FT /protein_id="CAB81656.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKTK" FT mRNA 27782822..27783202 FT /gene="HIST1H2BM" FT /locus_tag="RP1-160A22.1-001" FT /product="histone cluster 1, H2bm" FT /note="match: cDNAs: Em:AJ223352 Em:AJ223353 Em:AL050291 FT Em:M18045 Em:M18046 Em:M25487 Em:M60756" FT /note="match: ESTs: Em:AA064568 Em:AA080125 Em:Aa166240 FT Em:AA217829 Em:AA218213 Em:AA255154 Em:AA256738 Em:AA286933 FT Em:AA315768 Em:AA389204 Em:AA396588 Em:AA493023 Em:AA493453 FT Em:AA507431 Em:AA557205 Em:AA654491 Em:AA724505 Em:AA822287 FT Em:AA873858 Em:AA885642 Em:AA995300 Em:AI016731 Em:AI022008 FT Em:AI138510 Em:AI183311 Em:AI195956 Em:AI201415 Em:AI340654 FT Em:AI349624 Em:AI462334 Em:AI843822.1 Em:AI850531.1 FT Em:AI937062.1 Em:AW012454.1 Em:AW260336.1 Em:AW296870.1 FT Em:N42055 Em:R34169 Em:W19956 Em:W41523 Em:W41584 Em:W49399 FT Em:W81985 Em:W92285" FT CDS 27782822..27783202 FT /gene="HIST1H2BM" FT /locus_tag="RP1-160A22.1-001" FT /standard_name="OTTHUMP00000016188" FT /product="histone cluster 1, H2bm" FT /note="match: proteins: Sw:P02281 Sw:P02293 Sw:P02294 FT Sw:P06900 Sw:P0C1H5 Sw:P10853 Sw:P10854 Sw:P14001 Sw:P23527 FT Sw:P33778 Sw:P62808 Sw:P78567 Sw:Q64524 Sw:Q8CGP2 Tr:O61214 FT Tr:O86571 Tr:Q90859 Tr:Q90860 Tr:Q9Z2Q9 Tr:Q9Z2R0" FT /protein_id="CAB81655.1" FT /translation="MPEPVKSAPVPKKGSKKAINKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT mRNA 27791886..27792258 FT /gene="HIST1H4J" FT /locus_tag="RP1-160A22.4-001" FT /product="histone 1, H4j" FT /note="match: ESTs: Em:AA010078 Em:AA022289 Em:AA028777 FT Em:AA702915 Em:AA848573 Em:AI116069 Em:AI420192.1 FT Em:AI438510 Em:AI494175.1 Em:AI653010.1 Em:AI987314.1 FT Em:AU019031 Em:C26941 Em:C98314 Em:R01621 Em:T88846" FT /note="match: cDNAs: Em:AF001288 Em:AF008301 Em:AF086564 FT Em:J00985 Em:J00986 Em:J00988 Em:J00989" FT CDS 27791903..27792214 FT /gene="HIST1H4J" FT /locus_tag="RP1-160A22.4-001" FT /standard_name="OTTHUMP00000016186" FT /product="histone 1, H4j" FT /note="match: proteins: Em:Y40C5A Sw:P04915 Sw:P27996 FT Sw:P35057 Sw:P35059 Sw:P40287 Sw:P50566 Sw:P62783 Sw:P62799 FT Sw:P84045 Sw:Q27443 Tr:O61175 Tr:O61178 Tr:P90677 Tr:P91878 FT Tr:P91880 Tr:Q27754 Tr:Q27875 Tr:Q27898 Tr:Q99525" FT /protein_id="CAC03426.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT misc_feature 27795010..27795220 FT /note="Single clone region. short insert library of pUC FT clone" FT mRNA complement(27798994..27799305) FT /gene="HIST1H4K" FT /locus_tag="RP1-160A22.2-001" FT /product="histone 1, H4k" FT CDS complement(27798994..27799305) FT /gene="HIST1H4K" FT /locus_tag="RP1-160A22.2-001" FT /standard_name="OTTHUMP00000016187" FT /product="histone 1, H4k" FT /note="match: proteins: Sw:P04915 Sw:P27996 Sw:P35057 FT Sw:P35059 Sw:P50566 Sw:P62783 Sw:P62788 Sw:P62799 Sw:P84045 FT Sw:Q27443 Tr:P91878" FT /protein_id="CAC03427.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT misc_feature 27803938 FT /note="Clone_left_end: RP1-193B12" FT misc_feature 27804138..27904411 FT /note="annotated region of clone" FT mRNA complement(27805725..27806117) FT /gene="HIST1H2AK" FT /locus_tag="RP1-193B12.12-001" FT /product="histone 1, H2ak" FT /note="match: ESTs: Em:AA027719 Em:AA060372 Em:AA073767 FT Em:AA231513 Em:AA272868 Em:AA492640 Em:AA528953 Em:AA980176 FT Em:AI152663 Em:AI153100 Em:AI882304 Em:AW673673 Em:AW821149 FT Em:W10474 Em:W40792 Em:W65215" FT /note="match: cDNAs: Em:AF041483 Em:AF151534 Em:AK022475 FT Em:AK022776 Em:S79038 Em:X98535" FT CDS complement(27805725..27806117) FT /gene="HIST1H2AK" FT /locus_tag="RP1-193B12.12-001" FT /standard_name="OTTHUMP00000018006" FT /product="histone 1, H2ak" FT /note="match: proteins: Tr:Q9XBQ1" FT /protein_id="CAB11417.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT mRNA 27806440..27806820 FT /gene="HIST1H2BN" FT /locus_tag="RP1-193B12.10-001" FT /product="histone 1, H2bn" FT /note="match: ESTs: Em:AA066051 Em:AA217829 Em:AA256738 FT Em:AA396588 Em:AA493023 Em:AA493453 Em:AA754716 Em:AA822287 FT Em:AA867278 Em:AA985784 Em:AI037531 Em:AI157783 Em:AI688098 FT Em:AI703148 Em:AI790082 Em:AV648706 Em:AV761592 Em:AW956132 FT Em:BE395993 Em:BE880791 Em:BF184255 Em:BF210626 Em:BF684122 FT Em:BF765751 Em:BG283093 Em:BG338027 Em:W73546" FT /note="match: cDNAs: Em:AJ223353 Em:BC002842" FT CDS 27806440..27806820 FT /gene="HIST1H2BN" FT /locus_tag="RP1-193B12.10-001" FT /standard_name="OTTHUMP00000018018" FT /product="histone 1, H2bn" FT /note="match: proteins: Em:CE07075 Em:CE16386 Sw:P02294 FT Sw:P10853 Sw:P10854 Sw:P33778 Sw:P57053 Sw:P62807 Sw:P62808 FT Sw:Q00715 Sw:Q8CGP2 Sw:Q99877 Sw:Q99879 Sw:Q99880" FT /protein_id="CAB11418.1" FT /translation="MPEPSKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT misc_feature 27808964 FT /note="Clone_right_end: RP1-160A22" FT CDS complement(27831840..27832179) FT /pseudo FT /locus_tag="RP1-193B12.2-001" FT /product="histone 1, H2b, pseudogene 2" FT /note="match: proteins: Sw:P02281 Sw:P06899 Sw:P06900 FT Sw:P0C1H5 Sw:P10853 Sw:P10854 Sw:P23527 Sw:P33778 Sw:P62808 FT Sw:Q64524 Sw:Q8CGP2 Tr:Q90859" FT mRNA 27833133..27833525 FT /gene="HIST1H2AL" FT /locus_tag="RP1-193B12.11-001" FT /product="histone 1, H2al" FT /note="match: ESTs: Em:AA138954 Em:AA407651 Em:AA412229 FT Em:AA683671 Em:AA947684 Em:BE543504 Em:BE973793 Em:BF011502 FT Em:BF192479 Em:BG331432 Em:BG386566 Em:H98035" FT /note="match: cDNAs: Em:BC003602 Em:U70133" FT CDS 27833133..27833525 FT /gene="HIST1H2AL" FT /locus_tag="RP1-193B12.11-001" FT /standard_name="OTTHUMP00000016189" FT /product="histone 1, H2al" FT /note="match: proteins: Sw:P02262 Sw:P02263 Sw:P04908 FT Sw:P0C0S9 Sw:P13912 Sw:P20671 Sw:P22752 Sw:P28001 Sw:Q00728 FT Sw:Q64522 Sw:Q6GSS7 Tr:P91960" FT /protein_id="CAD24073.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT mRNA complement(27834627..27835307) FT /gene="HIST1H1B" FT /locus_tag="RP1-193B12.9-001" FT /product="histone cluster 1, H1b" FT CDS complement(27834627..27835307) FT /gene="HIST1H1B" FT /locus_tag="RP1-193B12.9-001" FT /standard_name="OTTHUMP00000017748" FT /product="histone cluster 1, H1b" FT /note="match: proteins: Sw:P02251 Sw:P02252 Sw:P02253 FT Sw:P16401 Sw:P43276 Tr:Q14463 Tr:Q99282" FT /protein_id="CAB11421.1" FT /translation="MSETAPAETATPAPVEKSPAKKKATKKAAGAGAAKRKATGPPVSE FT LITKAVAASKERNGLSLAALKKALAAGGYDVEKNNSRIKLGLKSLVSKGTLVQTKGTGA FT SGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPKKAKKPA FT AAGVKKVAKSPKKAKAAAKPKKATKSPAKPKAVKPKAAKPKAAKPKAAKPKAAKAKKAA FT AKKK" FT mRNA complement(27839683..27840093) FT /gene="HIST1H3I" FT /locus_tag="RP1-193B12.1-001" FT /product="histone 1, H3i" FT /note="match: ESTs: Em:AL510576 Em:BE265074 Em:BE414460 FT Em:BE414720 Em:BE563417 Em:BE571287 Em:BE736346 Em:BF806456 FT Em:BF806457 Em:BF810547" FT /note="match: cDNAs: Em:AF218029 Em:BC001124 Em:BC002052 FT Em:X13605 Em:X73683" FT CDS complement(27839683..27840093) FT /gene="HIST1H3I" FT /locus_tag="RP1-193B12.1-001" FT /standard_name="OTTHUMP00000017803" FT /product="histone 1, H3i" FT /note="match: proteins: Em:CE03253 Em:CE10540 Sw:P02299 FT Sw:P08898 Sw:P08903 Sw:P22843 Sw:P68428 Sw:P68433 Sw:P69079 FT Sw:P69248 Sw:P84232 Sw:P90543 Sw:Q16695 Tr:Q27532 Tr:Q27718 FT Tr:Q27719 Tr:Q42782 Tr:Q43203 Tr:Q92132 Tr:Q9U5H8" FT /protein_id="CAB11424.1" FT /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG FT TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGL FT FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" FT mRNA complement(27840977..27841288) FT /gene="HIST1H4L" FT /locus_tag="RP1-193B12.7-001" FT /product="histone 1, H4l" FT /note="match: ESTs: Em:AA004159 Em:AA403096 Em:AA578323 FT Em:AA592363 Em:AA642479 Em:AA754064 Em:AU093175 Em:AU108352 FT Em:AU163098 Em:AW506659 Em:AW519968 Em:BE416925 Em:BE416926 FT Em:BE424657 Em:BE510938 Em:BE518709 Em:BE518834 Em:BE575240 FT Em:BE575274 Em:BE640337 Em:BF573931 Em:C98155 Em:C98314" FT /note="match: cDNAs: Em:AF001288 Em:AF008301 Em:J00988 FT Em:J00989" FT CDS complement(27840977..27841288) FT /gene="HIST1H4L" FT /locus_tag="RP1-193B12.7-001" FT /standard_name="OTTHUMP00000017840" FT /product="histone 1, H4l" FT /note="match: proteins: Em:CE03252 Em:CE07287 Em:CE10522 FT Sw:P04915 Sw:P27996 Sw:P35057 Sw:P35059 Sw:P50566 Sw:P62783 FT Sw:P62788 Sw:P62799 Sw:P84045 Sw:Q27443 Tr:O61175 Tr:O61178 FT Tr:P90677 Tr:P91878 Tr:P91880 Tr:Q27637 Tr:Q27821 Tr:Q27875 FT Tr:Q27898 Tr:Q99525" FT /protein_id="CAD24074.1" FT /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVK FT RISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG" FT CDS complement(27846372..27846596) FT /pseudo FT /locus_tag="RP1-193B12.5-001" FT /product="hypothetical protein pseudogene" FT /note="match: proteins: Tr:Q99809" FT mRNA complement(27858160..27858570) FT /gene="HIST1H3J" FT /locus_tag="RP1-193B12.4-001" FT /product="histone 1, H3j" FT /note="match: ESTs: Em:AA130796 Em:AV743665 Em:AW863329 FT Em:BE258551 Em:BF125099 Em:BF695249 Em:BG024990 FT Em:CNSLT06MR Em:W67859" FT /note="match: cDNAs: Em:AF112370 Em:D16963 Em:D17021 FT Em:J00983 Em:M11353 Em:M11354 Em:X51897 Em:Y00392" FT CDS complement(27858160..27858570) FT /gene="HIST1H3J" FT /locus_tag="RP1-193B12.4-001" FT /standard_name="OTTHUMP00000017804" FT /product="histone 1, H3j" FT /protein_id="CAD24076.1" FT /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPG FT TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGL FT FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" FT mRNA complement(27860535..27860927) FT /gene="HIST1H2AM" FT /locus_tag="RP1-193B12.6-001" FT /product="histone 1, H2am" FT /note="match: ESTs: Em:AA896466 Em:BF478293" FT /note="match: cDNAs: Em:AF030235 Em:BC004274 Em:D17015" FT CDS complement(27860535..27860927) FT /gene="HIST1H2AM" FT /locus_tag="RP1-193B12.6-001" FT /standard_name="OTTHUMP00000016191" FT /product="histone 1, H2am" FT /note="match: proteins: Sw:O65759 Sw:P02262 Sw:P02263 FT Sw:P02273 Sw:P02274 Sw:P04908 Sw:P0C0S9 Sw:P13912 Sw:P20671 FT Sw:P22752 Sw:P25469 Sw:P28001 Sw:P35064 Sw:P35065 Sw:P40282 FT Sw:Q00728 Sw:Q64522 Sw:Q6GSS7 Tr:P91960 Tr:Q00487 Tr:Q29579 FT Tr:Q92064 Tr:Q9NV63 Tr:Q9S994" FT /protein_id="CAD24077.1" FT /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVG FT AGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIA FT QGGVLPNIQAVLLPKKTESHHKAKGK" FT mRNA complement(join(27858413..27858588,27860539..27860884)) FT /gene="HIST1H3J" FT /locus_tag="RP1-193B12.4-002" FT /product="histone 1, H3j" FT /note="match: ESTs: Em:DT932719.1 Em:DT932720.1" FT mRNA 27861241..27861621 FT /gene="HIST1H2BO" FT /locus_tag="RP1-193B12.8-001" FT /product="histone cluster 1, H2bo" FT /note="match: ESTs: Em:AA053984 Em:AI510308" FT CDS 27861241..27861621 FT /gene="HIST1H2BO" FT /locus_tag="RP1-193B12.8-001" FT /standard_name="OTTHUMP00000016190" FT /product="histone cluster 1, H2bo" FT /note="match: proteins: Em:CE05470 Sw:P02281 Sw:P06899 FT Sw:P06900 Sw:P0C1H5 Sw:P14001 Sw:P23527 Sw:P49120 Sw:P69070 FT Sw:P70696 Sw:Q00715 Sw:Q00729 Sw:Q16778 Sw:Q64524 FT Sw:Q93079" FT /protein_id="CAD24078.1" FT /translation="MPDPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKV FT LKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP FT GELAKHAVSEGTKAVTKYTSSK" FT mRNA complement(27879024..27880097) FT /gene="OR2B2" FT /locus_tag="RP1-193B12.3-001" FT /product="olfactory receptor, family 2, subfamily B, member FT 2" FT /note="match: ESTs: Em:N68399" FT /note="match: cDNAs: Em:AF010293 Em:AF034896 Em:AF042016 FT Em:AF042017 Em:AF042023 Em:AF044033 Em:AF044035 Em:AF044036 FT Em:AF091567 Em:AF091568 Em:AF102521 Em:AF102533 Em:AF102534 FT Em:AF102535 Em:AF102537 Em:AF102538 Em:AF102541 Em:AJ003145 FT Em:AJ250755 Em:D12820 Em:M64377 Em:M64381 Em:M64385 FT Em:M64388 Em:M64391 Em:M64392 Em:X80671 Em:X89706 Em:Y07557 FT Em:Y10529 Em:Y14442" FT CDS complement(27879024..27880097) FT /gene="OR2B2" FT /locus_tag="RP1-193B12.3-001" FT /standard_name="OTTHUMP00000016192" FT /product="olfactory receptor, family 2, subfamily B, member FT 2" FT /note="match: proteins: Sw:O43749 Sw:O60412 Sw:O76000 FT Sw:O76001 Sw:O76002 Sw:O76100 Sw:O95013 Sw:O95371 Sw:O95918 FT Sw:P23265 Sw:P23266 Sw:P23271 Sw:P23275 Sw:P30954 Sw:P34982 FT Sw:P37068 Sw:P37070 Sw:P37071 Sw:P37072 Sw:P58173 Sw:Q13607 FT Sw:Q95155 Sw:Q95156 Sw:Q9GZK3 Sw:Q9TU86 Sw:Q9UGF5 Sw:Q9UGF6 FT Sw:Q9Y3N9 Tr:O13036 Tr:O35434 Tr:O57597 Tr:O70269 Tr:O70270 FT Tr:O70271 Tr:O93549 Tr:O95499 Tr:Q62943 Tr:Q62944 Tr:Q63394 FT Tr:Q63395 Tr:Q90806 Tr:Q90807 Tr:Q90808 Tr:Q94736 Tr:Q9I835 FT Tr:Q9I8Z6 Tr:Q9I8Z7 Tr:Q9JKA6 Tr:Q9PSJ3 Tr:Q9QW36 Tr:Q9QW38 FT Tr:Q9QZ17 Tr:Q9QZ20 Tr:Q9QZ21 Tr:Q9QZ22 Tr:Q9Z1K0" FT /protein_id="CAD24079.1" FT /translation="MNWVNKSVPQEFILLVFSDQPWLEIPPFVMFLFSYILTIFGNLTI FT ILVSHVDFKLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNICNTRKVISYGGCVAQLFIF FT LALGSTECLLLAVMCFDRFVAICRPLHYSIIMHQRLCFQLAAASWISGFSNSVLQSTWT FT LKMPLCGHKEVDHFFCEVPALLKLSCVDTTANEAELFFISVLFLLIPVTLILISYAFIV FT QAVLRIQSAEGQRKAFGTCGSHLIVVSLFYGTAISMYLQPPSPSSKDRGKMVSLFCGII FT APMLNPLIYTLRNKEVKEAFKRLVAKSLLNQEIRNMQMISFAKDTVLTYLTNFSASCPI FT FVITIENYCNLPQRKFP" FT misc_feature 27891412 FT /note="Clone_left_end: RP3-408B20" FT misc_feature 27904311 FT /note="Clone_right_end: RP1-193B12" FT misc_feature 27904412..27949099 FT /note="annotated region of clone" FT CDS 27905243..27906181 FT /pseudo FT /locus_tag="RP3-408B20.1-001" FT /product="7 transmembrane receptor (rhodopsin family) FT (olfactory receptor like) pseudogene (hs6M1-33P)" FT /note="match: proteins: Sw:O76000 Sw:O76001 Sw:O76002 FT Sw:O95006 Sw:O95371 Sw:O95918 Sw:P23275 Sw:P70526 Sw:Q13607 FT Sw:Q95156 Sw:Q95157 Sw:Q9GZK3 Sw:Q9UGF6 Sw:Q9Y3N9 Tr:O35434 FT Tr:Q62007 Tr:Q63394 Tr:Q90806 Tr:Q9PSJ3 Tr:Q9QZ18 Tr:Q9QZ19 FT Tr:Q9QZ21 Tr:Q9QZ22 Tr:Q9TU84 Tr:Q9WVD9" FT mRNA 27925019..27925960 FT /locus_tag="RP3-408B20.2-001" FT /product="novel 7 transmembrane receptor (rhodopsin family) FT (olfactory receptor like) protein (hs6M1-32)" FT /note="match: ESTs: Em:N68399" FT /note="match: cDNAs: Em:AF010293 Em:AF034896 Em:AF042023 FT Em:AF044034 Em:AF091573 Em:AF091574 Em:AF102540 Em:D12820 FT Em:M64388 Em:M64391 Em:X89670 Em:X89700 Em:Y07557 FT Em:Y14442" FT CDS 27925019..27925960 FT /locus_tag="RP3-408B20.2-001" FT /standard_name="OTTHUMP00000016193" FT /product="novel 7 transmembrane receptor (rhodopsin family) FT (olfactory receptor like) protein (hs6M1-32)" FT /note="match: proteins: Sw:O60403 Sw:O60412 Sw:O76000 FT Sw:O95918 Sw:P23266 Sw:P23270 Sw:P37069 Sw:P37070 Sw:P37071 FT Sw:P37072 Sw:P58173 Sw:Q95156 Sw:Q9GZK3 Sw:Q9QY00 Tr:O77758 FT Tr:O95499 Tr:Q62943 Tr:Q63394 Tr:Q63395 Tr:Q90807 Tr:Q90808 FT Tr:Q9QW36 Tr:Q9QW38 Tr:Q9QZ17 Tr:Q9QZ19 Tr:Q9QZ20 Tr:Q9QZ21 FT Tr:Q9QZ22 Tr:Q9R0K3 Tr:Q9R0K4 Tr:Q9WU86 Tr:Q9Z1K0" FT /protein_id="CAC14158.1" FT /translation="MNWVNDSIIQEFILLGFSDRPWLEFPLLVVFLISYTVTIFGNLTI FT ILVSRLDTKLHTPMYFFLTNLSLLDLCYTTCTVPQMLVNLCSIRKVISYRGCVAQLFIF FT LALGATEYLLLAVMSFDRFVAICRPLHYSVIMHQRLCLQLAAASWVTGFSNSVWLSTLT FT LQLPLCDPYVIDHFLCEVPALLKLSCVETTANEAELFLVSELFHLIPLTLILISYAFIV FT RAVLRIQSAEGRQKAFGTCGSHLIVVSLFYSTAVSVYLQPPSPSSKDQGKMVSLFYGII FT APMLNPLIYTLRNKEVKEGFKRLVARVFLIKK" FT CDS 27932953..27933292 FT /pseudo FT /locus_tag="RP3-408B20.3-001" FT /product="60S acidic ribosomal protein P2 (RPLP2) FT pseudogene." FT /note="match: proteins: Sw:O00806 Sw:O01725 Sw:O61463 FT Sw:P02399 Sw:P02401 Sw:P05387 Sw:P41099 Sw:P42037 Sw:P42039 FT Sw:P42899 Sw:Q29315 Sw:Q9UUZ6 Tr:Q9SM25 Tr:Q9SMI4 Tr:Q9U553 FT Tr:Q9ZRF5" FT CDS 27944928..27945853 FT /pseudo FT /locus_tag="RP3-408B20.4-001" FT /product="7 transmembrane receptor (rhodopsin family) FT (olfactory receptor like) pseudogene (hs6M1-34P)" FT /note="match: proteins: Sw:O76000 Sw:O76001 Sw:O76002 FT Sw:O76100 Sw:O95007 Sw:O95371 Sw:O95918 Sw:P30955 Sw:P37068 FT Sw:P37070 Sw:P37071 Sw:P37072 Sw:Q13607 Sw:Q95155 Sw:Q95156 FT Sw:Q9QY00 Sw:Q9TU90 Sw:Q9TU95 Sw:Q9UGF5 Sw:Q9UGF7 Tr:O35184 FT Tr:O35434 Tr:Q62942 Tr:Q63395 Tr:Q90807 Tr:Q90808 Tr:Q9QW38 FT Tr:Q9QZ20 Tr:Q9R0K2 Tr:Q9TS22 Tr:Q9TU85 Tr:Q9TU98 FT Tr:Q9Z1V0" FT misc_feature 27948900 FT /note="Clone_left_end: RP1-313I6" FT misc_feature 27949100..28079278 FT /note="annotated region of clone" FT CDS 27978501..27980122 FT /pseudo FT /locus_tag="RP1-313I6.1-001" FT /product="KIAA0036 pseudogene" FT /note="match: proteins: Sw:O74805 Sw:Q15051 Sw:Q23979 FT Sw:Q8CJ27" FT CDS 28001725..28002633 FT /pseudo FT /locus_tag="RP1-313I6.2-001" FT /product="olfactory receptor, family 2, subfamily W, member FT 2 pseudogene" FT /note="match: proteins: Sw:O15974 Sw:O43749 Sw:O60412 FT Sw:O76000 Sw:O95013 Sw:O95221 Sw:O95222 Sw:O95918 Sw:O97504 FT Sw:P23266 Sw:P23267 Sw:P23270 Sw:P23272 Sw:P23273 Sw:P23274 FT Sw:P30953 Sw:P30955 Sw:P32244 Sw:P32245 Sw:P35358 Sw:P51473 FT Sw:P55167 Sw:P70596 Sw:Q09388 Sw:Q13606 Sw:Q26418 Sw:Q26419 FT Sw:Q95154 Sw:Q95155 Sw:Q9GZK3 Sw:Q9Y3N9 Sw:Q9Y585 Tr:O13036 FT Tr:O19089 Tr:O57597 Tr:O70266 Tr:O70268 Tr:O73667 Tr:O77543 FT Tr:O77544 Tr:O77545 Tr:O77551 Tr:O93549 Tr:O95220 Tr:O95499 FT Tr:Q62331 Tr:Q62942 Tr:Q63394 Tr:Q63395 Tr:Q90806 Tr:Q9Z1U4 FT Tr:Q9Z229 Tr:Q9Z234" FT CDS 28014212..28015145 FT /pseudo FT /locus_tag="RP1-313I6.3-001" FT /product="olfactory receptor, family 2, subfamily B, member FT 7 pseudogene" FT /note="match: proteins: Sw:O43749 Sw:O60431 Sw:O76000 FT Sw:O76001 Sw:O76002 Sw:O95371 Sw:O95918 Sw:P23265 Sw:P23275 FT Sw:P30953 Sw:P37071 Sw:P47887 Sw:Q8NGS0 Sw:Q8VEZ0 Sw:Q95156 FT Sw:Q9Y3N9 Tr:O35184 Tr:O43874 Tr:O77756 Tr:O77757 Tr:O77758 FT Tr:O95499 Tr:Q62007 Tr:Q62944 Tr:Q63395 Tr:Q90807 Tr:Q90808 FT Tr:Q9Z1V0" FT misc_feature 28015987 FT /note="Clone_left_end: RP3-408B20" FT CDS complement(28021006..28021943) FT /pseudo FT /locus_tag="RP1-313I6.9-001" FT /product="olfactory receptor, family 2, subfamily B, member FT 8 pseudogene" FT /note="match: proteins: Sw:O43749 Sw:O76000 Sw:O76001 FT Sw:O76002 Sw:O95371 Sw:O95918 Sw:P23266 Sw:P23268 Sw:P23272 FT Sw:P23274 Sw:P23275 Sw:P30953 Sw:P34982 Sw:Q13606 Sw:Q8VEZ0 FT Sw:Q95154 Sw:Q95155 Sw:Q9GZK3 Sw:Q9Y3N9 Sw:Q9Y585 Tr:O35434 FT Tr:Q62942 Tr:Q63394 Tr:Q9Z1K0" FT CDS 28041094..>28042011 FT /pseudo FT /locus_tag="RP1-313I6.11-001" FT /product="olfactory receptor, family 1, subfamily F, member FT 12 pseudogene" FT /note="match: proteins: Sw:O43749 Sw:O76001 Sw:O76002 FT Sw:O95371 Sw:P23266 Sw:P23272 Sw:P23274 Sw:P23275 Sw:P30953 FT Sw:P30954 Sw:P47881 Sw:Q8VEZ0 Sw:Q9GZK3 Sw:Q9Y3N9 Sw:Q9Y585 FT Tr:O13036 Tr:O35434 Tr:O57597 Tr:O70269 Tr:O70270 Tr:O70271 FT Tr:O77756 Tr:O77757 Tr:O77758 Tr:Q62942 Tr:Q63394 Tr:Q90806 FT Tr:Q94736" FT /db_xref="PSEUDO:CAB92079.1" FT mRNA join(28048753..28049308,28053259..28053669, FT 28053950..28054088,28056341..28057341) FT /gene="ZNF165" FT /locus_tag="RP1-313I6.10-001" FT /product="zinc finger protein 165" FT /note="match: ESTs: Em:AI559497.1 Em:AI798474.1 Em:C05700 FT Em:W31899.1 Em:W39262.1" FT /note="match: cDNAs: Em:U78722 Em:X84801" FT CDS join(28053259..28053669,28053950..28054088, FT 28056341..28057248) FT /gene="ZNF165" FT /locus_tag="RP1-313I6.10-001" FT /standard_name="OTTHUMP00000016195" FT /product="zinc finger protein 165" FT /note="match: proteins: Sw:O43309 Sw:P49910" FT /protein_id="CAB92080.1" FT /translation="MATEPKKAAAQNSPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQ FT ELCRQLFRQFCYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGD FT LQAWVHEHYPESGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKL FT QPVETKAHFDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGE FT SQDICKSAGRVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNL FT NSNEFTHQKSCKHGTCDQSFKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSG FT DKTHQCNECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERP FT FGCKECGRAFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYEC FT SECGRAFSQSSNLSQHQRIHMRENLLM" FT polyA_signal 28057300..28057305 FT polyA_signal 28057304..28057309 FT polyA_signal 28057311..28057316 FT polyA_site 28057341 FT CDS 28060326..28060619 FT /pseudo FT /locus_tag="RP1-313I6.7-001" FT /product="zinc finger protein pseudogene" FT /note="match: proteins: Sw:O15535 Sw:O43309 Sw:Q15697 FT Sw:Q9Z1D7 Sw:Q9Z1D8 Tr:Q15636 Tr:Q16670" FT CDS complement(28064889..28065147) FT /pseudo FT /locus_tag="RP1-313I6.8-001" FT /product="zinc finger protein pseudogene" FT /note="match: proteins: Sw:O15535 Sw:O43309 Sw:O75123 FT Sw:P08043 Sw:P10078 Sw:P15620 Sw:P17026 Sw:P17032 Sw:P17036 FT Sw:P18734 Sw:P49910 Sw:P51508 Sw:P51522 Sw:P51523 Sw:P52740 FT Sw:Q02975 Sw:Q03309 Sw:Q07230 Sw:Q13398 Sw:Q14585 Sw:Q15776 FT Sw:Q61751 Sw:Q61967 Sw:Q9Y2P7 Sw:Q9Y6Q3 Tr:O43693 Tr:Q92967 FT Tr:Q9Y2N9" FT misc_feature 28079178 FT /note="Clone_right_end: RP1-313I6" FT misc_feature 28079279..28134658 FT /note="annotated region of clone" FT CDS 28083406..28084329 FT /pseudo FT /locus_tag="RP1-265C24.5-001" FT /product="C2H2 type zinc finger protein pseudogene" FT /note="match: proteins: Sw:O43309 Sw:O75467 Sw:P10075 FT Sw:P15620 Sw:P17040 Sw:P17097 Sw:P18730 Sw:P52742 Sw:Q06730 FT Sw:Q62513 Sw:Q8N720 Sw:Q969J2 Sw:Q96K75 Sw:Q96N95 Sw:Q9BRR0 FT Sw:Q9HBT8 Sw:Q9UC06 Tr:Q91VW9 Tr:Q921K6 Tr:Q9CV15 Tr:Q9H4Z7 FT Tr:Q9Y2P0" FT mRNA join(28092338..28092455,28093191..28093608, FT 28094561..28094699,28097208..28097860) FT /gene="ZNF435" FT /locus_tag="RP1-265C24.6-001" FT /product="zinc finger protein 435" FT /note="match: ESTs: Em:BE244328 Em:BE379209" FT /note="match: cDNAs: Em:AK025844 Em:BC004255" FT CDS join(28093222..28093608,28094561..28094699, FT 28097208..28097728) FT /gene="ZNF435" FT /locus_tag="RP1-265C24.6-001" FT /standard_name="OTTHUMP00000016197" FT /product="zinc finger protein 435" FT /note="match: proteins: Sw:O15535 Sw:O43309 Sw:O60304 FT Sw:O95125 Sw:P17028 Sw:P49910 Sw:Q07231 Sw:Q91VN1 Sw:Q9UNY5 FT Sw:Q9Y2L8 Sw:Q9Z1D7 Sw:Q9Z1D9 Sw:Q9Z2K3" FT /protein_id="CAC15900.2" FT /translation="MTTALEPEDQKGLLIIKAEDHYWGQDSSSQKCSPHRRELYRQHFR FT KLCYQDAPGPREALTQLWELCRQWLRPECHTKEQILDLLVLEQFLSILPKDLQAWVRAH FT HPETGEEAVTVLEDLERELDEPGKQVPGNSERRDILMDKLAPLGRPYESLTVQLHPKKT FT QLEQEAGKPQRNGDKTRTKNEELFQKEDMPKDKEFLGEINDRLNKDTPQHPKSKDIIEN FT EGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG FT HHRVHTGVKPYKCKECGKDFSGRTGLIQHQRIHTGEKPYECDECGRPFRVSSALIRHQR FT IHTANKLY" FT polyA_signal 28097837..28097842 FT polyA_site 28097860 FT mRNA join(28109716..28109807,28116094..28116602, FT 28117261..28117402,28119623..28119714,28120039..28120162, FT 28120834..28124089) FT /gene="ZNF192" FT /locus_tag="RP1-265C24.7-001" FT /product="zinc finger protein 192" FT /note="match: cDNAs: Em:U57796" FT /note="match: ESTs: Em:Aa443452 Em:Aa453245 Em:AI904099 FT Em:AU051574 Em:AW369642 Em:AW369666 Em:AW369679" FT CDS join(28116186..28116602,28117261..28117402, FT 28119623..28119714,28120039..28120162,28120834..28121795) FT /gene="ZNF192" FT /locus_tag="RP1-265C24.7-001" FT /standard_name="OTTHUMP00000016198" FT /product="zinc finger protein 192" FT /note="match: proteins: Sw:O14978 Sw:O15535 Sw:O43309 FT Sw:O95125 Sw:P28698 Sw:P49910 Sw:Q15776 Sw:Q9BRR0 FT Tr:O70162" FT /protein_id="CAC15901.1" FT /translation="MAEESRKPSAPSPPDQTPEEDLVIVKVEEDHGWDQESSLHESNPL FT GQEVFRLRFRQLRYQETLGPREALIQLRALCHQWLRPDLNTKEQILELLVLEQFLTILP FT EELQTLVKEHQLENGEEVVTLLEDLERQIDILGRPVSARVHGHRVLWEEVVHSASAPEP FT PNTQLQSEATQHKSPVPQESQERAMSTSQSPTRSQKGSSGDQEMTATLLTAGFQTLEKI FT EDMAVSLIREEWLLDPSQKDLCRDNRPENFRNMFSLGGETRSENRELASKQVISTGIQP FT HGETAAKCNGDVIRGLEHEEARDLLGRLERQRGNPTQERRHKCDECGKSFAQSSGLVRH FT WRIHTGEKPYQCNVCGKAFSYRSALLSHQDIHNKVKRYHCKECGKAFSQNTGLILHQRI FT HTGEKPYQCNQCGKAFSQSAGLILHQRIHSGERPYECNECGKAFSHSSHLIGHQRIHTG FT EKPYECDECGKTFRRSSHLIGHQRSHTGEKPYKCNECGRAFSQKSGLIEHQRIHTGERP FT YKCKECGKAFNGNTGLIQHLRIHTGEKPYQCNECGKAFIQRSSLIRHQRIHSGEKSESI FT SV" FT polyA_signal 28124007..28124012 FT mRNA join(28129559..28129599,28130358..28130544, FT 28132527..28132679,28134279..28134658, FT complement(AL022393.1:84881..85554), FT complement(AL022393.1:82841..83033)) FT /locus_tag="AL022393.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI524812 Em:CNSLT03S0" FT /note="match: cDNAs: Em:AI807384 Em:CNSLT03RZ" FT misc_feature 28134459 FT /note="Clone_left_end: XX-P373C6" FT misc_feature complement(28134659..28220212) FT /note="annotated region of clone" FT mRNA complement(join(28212401..28213753,28214747..28214870, FT 28215845..28215927,28217465..28217612,28219336..28220002)) FT /locus_tag="AL022393.1-001" FT /product="novel C2H2 type zinc finger protein" FT /note="match: ESTs: Em:AA333377 Em:AA580929 Em:AI634553 FT Em:AI638854 Em:AI758230 Em:AI807577 Em:AI830652 Em:AW594039 FT Em:BE549809 Em:M86009 Em:N35344 Em:N67634" FT /note="match: cDNAs: Em:AF291722 Em:U71601" FT CDS complement(join(28212894..28213753,28214747..28214870, FT 28215845..28215927,28217465..28217612,28219336..28219758)) FT /locus_tag="AL022393.1-001" FT /standard_name="OTTHUMP00000016199" FT /product="novel C2H2 type zinc finger protein" FT /note="match: proteins: Sw:Q9BRR0" FT /protein_id="CAC69823.1" FT /translation="MAREPRKNAALDAQSAEDQTGLLTVKVEKEEASALTAEVRAPCSP FT ARGPERSRQRFRGFRYPEAAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFLTI FT LPGNLQSWVREQHPESGEEVVVLLEYLERQLDEPAPQVPVGDQGQELLCCKMALLTQTQ FT GSQSSQCQPMKALFKHESLGSQPLHDRVLQVPGLAQGGCCREDAMVASRLTPGSQGLLK FT MEDVALTLTPGWTQLDSSQVNLYRDEKQENHSSLVSLGGEIQTKSRDLPPVKKLPEKEH FT GKICHLREDIAQIPTHAEAGEQEGRLQRKQKNAIGSRRHYCHECGKSFAQSSGLTKHRR FT IHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVFSHSSNLIKHQRTHT FT GEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRHQRIHGDKN FT VQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIEHQKIHTGEKPYQC FT DTCGKGFTRTSYLVQHQRSHVGKKTLSQ" FT polyA_signal complement(28212446..28212451) FT polyA_signal complement(28212435..28212440) FT polyA_site complement(28212418) FT polyA_site complement(28212401) FT polyA_site 28201254 FT polyA_signal 28201231..28201236 FT CDS join(28194863..28195282,28195468..28195615, FT 28200340..28200956) FT /gene="ZNF193" FT /locus_tag="AL022393.8-001" FT /standard_name="OTTHUMP00000016200" FT /product="zinc finger protein 193" FT /note="match: proteins: Sw:O15535" FT /protein_id="CAA18533.1" FT /translation="MNTNSKEVLSLGVQVPEAWEELLTMKVEAKSHLQWQESRLKRSNP FT LAREIFRRHFRQLCYQETPGPREALTRLQELCYQWLRPHVSTKEQILDLLVLEQFLSIL FT PKELQGWVREHCPESGEEAVILLEDLERELDEPQHEMVAHRHRQEVLCKEMVPLAEQTP FT LTLQSQPKEPQLTCDSAQKCHSIGETDEVTKTEDRELVLRKDCPKIVEPHGKMFNEQTW FT EVSQQDPSHGEVGEHKDRIERQWGNLLGEGQHKCDECGKSFTQSSGLIRHQRIHTGERP FT YECNECGKAFSRSSGLFNHRGIHNIQKRYHCKECGKVFSQSAGLIQHQRIHKGEKPYQC FT SQCSKSYSRRSFLIEHQRSHTGERPHQCIECGKSFNRHCNLIRHQKIHTVAELV" FT mRNA join(28193117..28193144,28194790..28195282, FT 28195468..28195615,28200340..28201254) FT /gene="ZNF193" FT /locus_tag="AL022393.8-001" FT /product="zinc finger protein 193" FT /note="match: ESTs: Em:AI080663 Em:AI141853 Em:AI222951 FT Em:AI809798 Em:AI863236 Em:AI971878 Em:AW152506" FT /note="match: cDNAs: Em:U62392" FT CDS complement(28185421..28186412) FT /pseudo FT /locus_tag="AL022393.3-001" FT /product="transducer of ERBB2 (TOB) pseudogene" FT /note="match: proteins: Sw:P50616 Sw:P53348 Sw:P62325 FT Sw:Q14106 Sw:Q61471 Sw:Q63073 Sw:Q9JM55 Tr:O01675 Tr:O94807 FT Tr:Q9VXJ9" FT mRNA join(AL358933.15:50381..50421,AL358933.15:51180..51366, FT AL358933.15:53349..53501,AL358933.15:55101..55480, FT 28134659..28135332,28137180..28137372) FT /locus_tag="AL022393.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI524812 Em:CNSLT03S0" FT /note="match: cDNAs: Em:AI807384 Em:CNSLT03RZ" FT CDS join(28155828..28156193,28156425..28157210) FT /pseudo FT /locus_tag="AL022393.6-001" FT /product="zinc finger protein pseudogene" FT /note="match: proteins: Sw:O60765 Sw:O95201 Sw:P08042 FT Sw:P15620 Sw:P51523 Sw:P52737 Sw:Q03924 Sw:Q14585 Sw:Q96RE9 FT Sw:Q9P255 Sw:Q9Y2H8 Tr:Q96IR2 Tr:Q96LW1 Tr:Q96PN3 Tr:Q9ESY5 FT Tr:Q9H9R7 Tr:Q9R162" FT CDS 28143966..28144452 FT /pseudo FT /locus_tag="AL022393.7-001" FT /product="zinc finger protein pseudogene" FT /note="match: proteins: Sw:P10078 Sw:P30373 Sw:Q96K75 FT Sw:Q9GZX5 Sw:Q9Y473 Tr:O43361 Tr:Q96G73" FT polyA_signal 28137332..28137337 FT misc_feature 28220213..28234106 FT /note="annotated region of clone" FT mRNA 28227098..28228736 FT /locus_tag="RP11-424I5.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA136210 Em:AA136382 Em:AA193476 FT Em:AA193522 Em:AA319387 Em:AA364992 Em:AA426031 Em:AA609686 FT Em:AA719187 Em:AA757516 Em:AA868841 Em:AA889640 Em:AA902654 FT Em:AA913827 Em:AA922047 Em:AA953780 Em:AA993479 Em:AI015029 FT Em:AI129164 Em:AI183972 Em:AI206638 Em:AI240405 Em:AI243942 FT Em:AI479329 Em:AI633740 Em:AI671525 Em:AI825371 Em:AI825424 FT Em:AI873206 Em:AI970107 Em:AI989981 Em:AI990897 Em:AW003978 FT Em:AW072534 Em:AW172402 Em:AW196436 Em:AW207887 Em:AW515746 FT Em:BE042106 Em:BF061938 Em:BF222720 Em:BF592882 Em:H40878 FT Em:H86863 Em:H86864 Em:N35502 Em:N67617 Em:W70126 FT Em:W78197" FT /note="match: cDNAs: Em:AF085870 Em:AK011492 Em:AK012826 FT Em:AK014812 Em:AK015912 Em:AK026279 Em:BC000940" FT CDS 28227150..28228358 FT /locus_tag="RP11-424I5.1-001" FT /standard_name="OTTHUMP00000016201" FT /product="novel protein" FT /note="match: proteins: Em:E01A2 Sw:P25962 Sw:P26255 FT Sw:Q95252 Tr:O15793 Tr:O22758 Tr:O86718 Tr:Q9VB74" FT /protein_id="CAC69824.1" FT /translation="MPPVSRSSYSEDIVGSRRRRRSSSGSPPSPQSRCSSWDGCSRSHS FT RGREGLRPPWSELDVGALYPFSRSGSRGRLPRFRNYAFASSWSTSYSGYRYHRHCYAEE FT RQSAEDYEKEESHRQRRLKERERIGELGAPEVWGPSPKFPQLDSDEHTPVEDEEEVTHQ FT KSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDSDSNSESDTNSDSDDDKKR FT VKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKDSEEDLSEATWMEQPNVADTMDLIGPE FT APIIHTSQDEKPLKYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIGSFECSGYV FT MSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRESKILASFREMVHKKTKEK FT DDK" FT polyA_signal 28228713..28228718 FT polyA_site 28228736 FT misc_feature 28233907 FT /note="Clone_left_end: RP5-874C20" FT misc_feature complement(28234107..28331853) FT /note="annotated region of clone" FT CDS join(28327364..28327765,28329101..28329248, FT 28331080..28331162,28331469..28331592, FT AL358785.10:1450..2309) FT /locus_tag="RP11-245E14.1-001" FT /standard_name="OTTHUMP00000016204" FT /product="novel protein similar to zinc finger protein 306 FT ZNF306" FT /note="match: proteins: Sw:O14771 Sw:O15535 Sw:P17028 FT Sw:Q01968 Sw:Q07231 Sw:Q15697 Sw:Q9BRR0 Tr:Q07644 FT Tr:Q15636" FT /protein_id="CAI23088.1" FT /translation="MARELSESTALDAQSTEDQMELLVIKVEEEEAGFPSSPDLGSEGS FT RERFRGFRYPEAAGPREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQS FT WVREQHPESGEEVVVLLEYLERQLDEPAPQVSGVDQGQELLCCKMALLTPAPGSQSSQF FT QLMKALLKHESVGSQPLQDRVLQVPVLAHGGCCREDKVVASRLTPESQGLLKVEDVALT FT LTPEWTQQDSSQGNLCRDEKQENHGSLVSLGDEKQTKSRDLPPAEELPEKEHGKISCHL FT REDIAQIPTCAEAGEQEGRLQRKQKNATGGRRHICHECGKSFAQSSGLSKHRRIHTGEK FT PYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTGEKPYE FT CDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIHTGDKNVQEPE FT QGEAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPYQCNACGKGF FT TRISYLVQHQRSHVGKNILSQ" FT mRNA join(28327110..28327765,28329101..28329248, FT 28331080..28331162,28331469..28331592, FT AL358785.10:1450..2751) FT /locus_tag="RP11-245E14.1-001" FT /product="novel protein similar to zinc finger protein 306 FT ZNF306" FT /note="match: ESTs: Em:AA092331 Em:AA304455 Em:AA333377 FT Em:AA333377.1 Em:AA580382 Em:AA916559 Em:AI124541 FT Em:AI678222 Em:AL040316 Em:AL555537.1 Em:BG431384.1 FT Em:BM554180.1 Em:BM918366.1 Em:M86009 Em:N87412" FT /note="match: cDNAs: Em:BC006118.1 Em:BC014031.1 Em:U62392 FT Em:U71601 Em:U71601.1" FT mRNA complement(join(28292514..28294631,28295160..28295310, FT 28297080..28297555)) FT /gene="ZNF323" FT /locus_tag="RP5-874C20.5-001" FT /product="zinc finger protein 323" FT /note="match: ESTs: Em:AA877229 Em:AA927917 Em:AI221423 FT Em:AI440219 Em:AI680637 Em:BF676393" FT /note="match: cDNAs: Em:AB007886 Em:AK025844 Em:AK027060 FT Em:BC004255 Em:U62392" FT CDS complement(join(28293943..28294631,28295160..28295310, FT 28297080..28297460)) FT /gene="ZNF323" FT /locus_tag="RP5-874C20.5-001" FT /standard_name="OTTHUMP00000016202" FT /product="zinc finger protein 323" FT /note="match: proteins: Sw:O14709 Sw:O43309 Sw:P51523 FT Sw:P52742 Sw:Q07230 Sw:Q14586 Sw:Q9P0L1 Sw:Q9Y2L8 Sw:Q9Z1D7 FT Tr:Q16670" FT /protein_id="CAA17574.2" FT /translation="MASTEEQYDLKIVKVEEDPIWDQETHLRGNNFSGQEASRQLFRQF FT CYQETPGPREALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHP FT ESGEEAVAVVEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQ FT LRYESFCLHQFQEQDGESIPENQELASKQEILKEMEHLGDSKLQRDVSLDSKYRETCKR FT DSKAEKQQAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSS FT LNEHRRSHTGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQ FT HQRIHTGEKRYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQK FT IHTGERP" FT polyA_signal complement(28292543..28292548) FT polyA_site complement(28292514) FT polyA_site 28270326 FT polyA_site 28269243 FT polyA_signal 28269219..28269224 FT CDS join(28251591..28251986,28253328..28253484, FT 28254857..28254945,28264593..28264722,28265672..28265768, FT 28268501..28270061) FT /gene="PGBD1" FT /locus_tag="RP5-874C20.4-001" FT /standard_name="OTTHUMP00000016203" FT /product="piggyBac transposable element derived 1" FT /note="match: proteins: Sw:Q96JS3.1 Tr:Q53F43.1" FT /protein_id="CAD21704.2" FT /translation="MYEALPGPAPENEDGLVKVKEEDPTWEQVCNSQEGSSHTQEICRL FT RFRHFCYQEAHGPQEALAQLRELCHQWLRPEMHTKEQIMELLVLEQFLTILPKELQPCV FT KTYPLESGEEAVTVLENLETGSGDTGQQASVYIQGQDMHPMVAEYQGVSLECQSLQLLP FT GITTLKCEPPQRPQGNPQEVSGPVPHGSAHLQEKNPRDKAVVPVFNPVRSQTLVKTEEE FT TAQAVAAEKWSHLSLTRRNLCGNSAQETVMSLSPMTEEIVTKDRLFKAKQETSEEMEQS FT GEASGKPNRECAPQIPCSTPIATERTVAHLNTLKDRHPGDLWARMHISSLEYAAGDITR FT KGRKKDKARVSELLQGLSFSGDSDVEKDNEPEIQPAQKKLKVSCFPEKSWTKRDIKPNF FT PSWSALDSGLLNLKSEKLNPVELFELFFDDETFNLIVNETNNYASQKNVSLEVTVQEMR FT CVFGVLLLSGFMRHPRREMYWEVSDTDQNLVRDAIRRDRFELIFSNLHFADNGHLDQKD FT KFTKLRPLIKQMNKNFLLYAPLEEYYCFDKSMCECFDSDQFLNGKPIRIGYKIWCGTTT FT QGYLVWFEPYQEESTMKVDEDPDLGLGGNLVMNFADVLLERGQYPYHLCFDSFFTSVKL FT LSALKKKGVRATGTIRENRTEKCPLMNVEHMKKMKRGYFDFRIEENNEIILCRWYGDGI FT ISLCSNAVGIEPVNEVSCCDADNEEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRI FT RSKKWYSILVSYMIDVAMNNAWQLHRACNPGASLDPLDFRRFVAHFYLEHNAHLSD" FT mRNA join(28249349..28249695,28251533..28251986, FT 28253328..28253484,28254857..28254945,28264593..28264722, FT 28265672..28265768,28268501..28270326) FT /gene="PGBD1" FT /locus_tag="RP5-874C20.4-001" FT /product="piggyBac transposable element derived 1" FT /note="match: ESTs: Em:BM674715.1 Em:BQ185356.1" FT /note="match: cDNAs: Em:AK223446.1 Em:BC040117.1 FT Em:BC069033.1" FT CDS join(28239857..28240113,28240447..28240564, FT 28243972..28244873) FT /pseudo FT /locus_tag="RP5-874C20.3-001" FT /product="zinc finger protein SRE-ZBP pseudogene" FT /note="match: proteins: Tr:Q16670" FT misc_feature 28331854..28349217 FT /note="annotated region of clone" FT polyA_signal 28334504..28334509 FT polyA_site 28334524 FT CDS join(complement(AL021997.1:4089..4490), FT complement(AL021997.1:2606..2753), FT complement(AL021997.1:692..774), FT complement(AL021997.1:262..385),28333203..28334062) FT /locus_tag="RP11-245E14.1-001" FT /standard_name="OTTHUMP00000016204" FT /product="novel protein similar to zinc finger protein 306 FT ZNF306" FT /note="match: proteins: Sw:O14771 Sw:O15535 Sw:P17028 FT Sw:Q01968 Sw:Q07231 Sw:Q15697 Sw:Q9BRR0 Tr:Q07644 FT Tr:Q15636" FT /protein_id="CAH71668.1" FT /translation="MARELSESTALDAQSTEDQMELLVIKVEEEEAGFPSSPDLGSEGS FT RERFRGFRYPEAAGPREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQS FT WVREQHPESGEEVVVLLEYLERQLDEPAPQVSGVDQGQELLCCKMALLTPAPGSQSSQF FT QLMKALLKHESVGSQPLQDRVLQVPVLAHGGCCREDKVVASRLTPESQGLLKVEDVALT FT LTPEWTQQDSSQGNLCRDEKQENHGSLVSLGDEKQTKSRDLPPAEELPEKEHGKISCHL FT REDIAQIPTCAEAGEQEGRLQRKQKNATGGRRHICHECGKSFAQSSGLSKHRRIHTGEK FT PYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTGEKPYE FT CDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIHTGDKNVQEPE FT QGEAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPYQCNACGKGF FT TRISYLVQHQRSHVGKNILSQ" FT mRNA join(complement(AL021997.1:4089..4744), FT complement(AL021997.1:2606..2753), FT complement(AL021997.1:692..774), FT complement(AL021997.1:262..385),28333203..28334504) FT /locus_tag="RP11-245E14.1-001" FT /product="novel protein similar to zinc finger protein 306 FT ZNF306" FT /note="match: ESTs: Em:AA092331 Em:AA304455 Em:AA333377 FT Em:AA333377.1 Em:AA580382 Em:AA916559 Em:AI124541 FT Em:AI678222 Em:AL040316 Em:AL555537.1 Em:BG431384.1 FT Em:BM554180.1 Em:BM918366.1 Em:M86009 Em:N87412" FT /note="match: cDNAs: Em:BC006118.1 Em:BC014031.1 Em:U62392 FT Em:U71601 Em:U71601.1" FT polyA_site complement(28346732) FT polyA_signal complement(28346752..28346757) FT misc_feature 28349018 FT /note="Clone_left_end: RP1-29K1" FT mRNA complement(join(28346732..28349217,Z98745.1:101..1269, FT Z98745.1:9256..10402,Z98745.1:11562..11706, FT Z98745.1:16664..17133,Z98745.1:18317..18394)) FT /gene="ZSCAN12" FT /locus_tag="RP1-29K1.5-001" FT /product="zinc finger and SCAN domain containing 12" FT /note="match: cDNAs: Em:AB007886" FT CDS complement(join(28350266..28350386,28358373..28359519, FT 28360679..28360823,28365781..28366182)) FT /gene="dJ29K1.2" FT /product="dJ29K1.2 (KIAA0426 (C2H2 type zinc finger FT protein))" FT /note="match: proteins: Tr:O43309" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAB11428.2" FT /translation="MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVF FT RQYFRQFCYQETSGPREALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQA FT WVQEQHPESGEEVVTVLEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQ FT SMKAQPKYESPELESQQEQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSAR FT CGETREPEEITEEPSACSREDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGK FT AFSQHSHLIEHQRIHTGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFG FT RWSALNQHQRLHTGEKHYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRS FT ILTQHQGVHTGAKPYECNECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQ FT HQRIHTGEKPYKCDVCEKAFIQRTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQR FT IHTGERPYKCDECGNAFRGITSLIQHQRIHTGEKPYQCDECGKAFRQRKKTSYKEILLK FT NHSEPQAGVNLLLSSLIPEWQSCFRRDL" FT misc_feature 28367125..28367651 FT /note="CpG island" FT /inference="non-experimental evidence, no additional FT details recorded" FT mRNA complement(join(<28349118..28350386,28358373..28359519, FT 28360679..28360823,28365781..28366250,28367434..28367511)) FT /gene="dJ29K1.2" FT /product="dJ29K1.2 (KIAA0426 (C2H2 type zinc finger FT protein))" FT /note="match: cDNAs: Em:AB007886" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(join(<28402815..28402855,28403237..28403384, FT 28403723..28404010)) FT /gene="dJ29K1.3" FT /product="dJ29K1.3.1 (novel C2H2 type zinc finger protein FT (isoform 1))" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAC44640.1" FT /translation="MQEGLLAVKVKEEEEEHSCGPESGLSRNNPHTREIFRRRFRQFCY FT QESPGPREALQRLQELCHQWLRPEMHTKEQILELLVLEQFLTILPEELQAWVLSHAHEQ FT EEFVKEKATPGAAQESSNDQFQTLEEQLGYNLREVCPVQEIDGKAGTWNVELAPK" FT CDS complement(<28403636..28404010) FT /gene="dJ29K1.3" FT /product="dJ29K1.3.2 (novel C2H2 type zinc finger protein FT (isoform 2))" FT /note="match: proteins: Tr:O15535 Sw:P49910 Sw:O14754 FT Sw:P17028 Tr:Q9WUQ0 Tr:Q15776 Tr:Q9Z2K3" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAC44641.1" FT /translation="MQEGLLAVKVKEEEEEHSCGPESGLSRNNPHTREIFRRRFRQFCY FT QESPGPREALQRLQELCHQWLRPEMHTKEQILELLVLEQFLTILPEELQAWVRQHRPVS FT GEEAVTVLEDLERELDDPGEQ" FT mRNA complement(join(<28402815..28402855,28403237..28403384, FT 28403723..28404054)) FT /gene="dJ29K1.3" FT /product="dJ29K1.3.1 (novel C2H2 type zinc finger protein FT (isoform 1))" FT /note="match: ESTs: Em:BF079982" FT /inference="non-experimental evidence, no additional FT details recorded" FT mRNA complement(join(<28402668..28402855,28403237..28403384, FT 28411176..>28411279)) FT /gene="dJ29K1.3" FT /product="dJ29K1.3.3 (novel transcript (isoform 3))" FT /note="match: ESTs: Em:BF698315" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS 28414750..28415584 FT /pseudo FT /gene="dJ29K1.4" FT /note="dJ29K1.4 (COX11 (COX11 (yeast) homolog, cytochrome c FT oxidase assembly protein) pseudogene)" FT /note="match: proteins: Sw:Q9Y6N1" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(28423425..28423918) FT /pseudo FT /gene="OR2E1P" FT /note="dJ29K1.5 (olfactory receptor, family 2, subfamily E, FT member 1 pseudogene (hs6M1-9p))" FT /note="match: proteins: Tr:O76100 Tr:Q9Y299 Tr:O95918 FT Tr:Q9WV13 Sw:O95371 Sw:P23265 Tr:Q63394 Sw:Q95156 Tr:O76002 FT Tr:O35434 Tr:O76000 Tr:Q9Z1K0 Sw:P23268 Sw:P23275" FT /inference="non-experimental evidence, no additional FT details recorded" FT misc_feature 28437115..28437656 FT /note="CpG island" FT /inference="non-experimental evidence, no additional FT details recorded" FT misc_feature 28469477..28470382 FT /note="CpG island" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(join(28472069..28472275,28473480..28473579, FT 28474089..28474206)) FT /pseudo FT /gene="dJ29K1.1" FT /note="dJ29K1.1 (glutathion peroxidase pseudogene)" FT /note="continued from dJ1186N24.4 in Em:AL049543" FT /note="match: proteins: Tr:O18994 Sw:P28714 Sw:P21765 FT Tr:O43725 Sw:P30710 Tr:Q64625 Sw:Q64625 Sw:O75715 Sw:O18994 FT Sw:P37141 Sw:P23764 Tr:O46607" FT /inference="non-experimental evidence, no additional FT details recorded" FT misc_feature complement(28356908..28357144) FT /note="match: STS: Em:HSU50880 Em:U50880" FT misc_feature complement(28356902..28357146) FT /note="match: STS: Em:G31275" FT misc_feature complement(28357659..28358008) FT /note="match: STS: Em:HSU50881" FT misc_feature complement(28357659..28358105) FT /note="match: STS: Em:U50881" FT misc_feature 28359679..28359896 FT /note="match: STS: Em:G31315" FT misc_feature 28359679..28359950 FT /note="match: STS: Em:G31315" FT misc_feature complement(28364150..28364202) FT /note="match: GSS: Em:AQ026917" FT misc_feature complement(28367848..28367988) FT /note="match: GSS: Em:HSU94425" FT misc_feature 28384394..28384547 FT /note="match: GSS: Em:AQ320394" FT misc_feature 28387731..28387764 FT /note="match: GSS: Em:AQ217406" FT misc_feature 28387732..28387764 FT /note="match: GSS: Em:AQ077518 Em:B16228" FT misc_feature 28387732..28387975 FT /note="match: STS: Em:G57135" FT misc_feature complement(28387731..28387764) FT /note="match: GSS: Em:AQ196687" FT misc_feature complement(28387732..28387764) FT /note="match: GSS: Em:AQ260134" FT misc_feature 28408573..28408909 FT /note="match: GSS: Em:B78858" FT misc_feature complement(28416928..28417085) FT /note="match: STS: Em:G13197" FT misc_feature complement(28416687..28417116) FT /note="match: STS: Em:G13197" FT misc_feature 28419900..28419939 FT /note="match: GSS: Em:B40028" FT /note="match: STS: Em:BOVILS35" FT misc_feature 28419902..28419936 FT /note="match: GSS: Em:AQ052865" FT misc_feature 28419902..28419939 FT /note="match: GSS: Em:AQ061904" FT misc_feature 28419902..28419945 FT /note="match: GSS: Em:AQ076379" FT misc_feature 28419904..28419938 FT /note="match: GSS: Em:B88807" FT misc_feature 28419904..28419939 FT /note="match: GSS: Em:AQ115448 Em:AQ319571 Em:AQ326274" FT /note="match: STS: Em:G18709 Em:G41767" FT misc_feature 28419904..28419940 FT /note="match: STS: Em:AF019949 Em:HUMUT577" FT /note="match: GSS: Em:B49451 Em:B49487 Em:B50415" FT misc_feature 28419904..28419941 FT /note="match: STS: Em:G18390" FT misc_feature 28419904..28419943 FT /note="match: STS: Em:BTU95704" FT misc_feature 28419904..28419944 FT /note="match: STS: Em:AF002036 Em:BT9591 Em:G39308" FT misc_feature 28419905..28419942 FT /note="match: GSS: Em:FR0002343" FT misc_feature 28419905..28419943 FT /note="match: GSS: Em:AQ241502" FT misc_feature complement(28419898..28419930) FT /note="match: STS: Em:G31994" FT misc_feature complement(28419903..28419935) FT /note="match: GSS: Em:AQ358915" FT misc_feature complement(28419903..28419936) FT /note="match: STS: Em:HUMUT2121" FT misc_feature complement(28419902..28419939) FT /note="match: GSS: Em:AQ038546 Em:AQ108129 Em:AQ221120 FT Em:AQ284154 Em:AQ322164" FT misc_feature complement(28419903..28419939) FT /note="match: GSS: Em:AQ006114 Em:AQ353883" FT misc_feature complement(28419904..28419939) FT /note="match: GSS: Em:AQ022330 Em:AQ265433" FT /note="match: STS: Em:AF003650 Em:G34094 Em:HUM4STS439" FT misc_feature complement(28419904..28419940) FT /note="match: GSS: Em:AQ269737 Em:B60345" FT /note="match: STS: Em:HS286XF5 Em:HSA090ZD5 Em:HSB022XB1 FT Em:HSB060XC5" FT misc_feature complement(28419905..28419940) FT /note="match: GSS: Em:AQ081992 Em:AQ299562 Em:B44698" FT misc_feature complement(28419904..28419941) FT /note="match: STS: Em:BOVILS42" FT misc_feature complement(28419905..28419941) FT /note="match: GSS: Em:AQ081075" FT misc_feature complement(28419904..28419942) FT /note="match: STS: Em:HUM4STS317" FT misc_feature complement(28419904..28419943) FT /note="match: GSS: Em:AQ347257" FT /note="match: STS: Em:G34561 Em:HS046XH4 Em:HS114YA9 FT Em:HS179YF6 Em:HSB001VE9 Em:HSB024YH5" FT misc_feature complement(28419904..28419944) FT /note="match: GSS: Em:AQ063477" FT /note="match: STS: Em:G40703 Em:HSA041WC1 Em:HSA064YC1" FT misc_feature complement(28424092..28424125) FT /note="match: STS: Em:G08850" FT misc_feature complement(28433026..28433409) FT /note="match: GSS: Em:B52085" FT misc_feature 28433524..28433919 FT /note="match: GSS: Em:AQ043604" FT misc_feature complement(join(28430337..28430391,28439368..28439435, FT 28443428..28443635)) FT /note="match: STS: Em:L18335" FT misc_feature 28452190..28452229 FT /note="match: STS: Em:HSA189XH9" FT misc_feature 28452190..28452230 FT /note="match: STS: Em:HUMUT7805" FT misc_feature 28452191..28452231 FT /note="match: GSS: Em:AQ208189" FT misc_feature 28452191..28452255 FT /note="match: GSS: Em:AQ174342" FT misc_feature 28452192..28452229 FT /note="match: STS: Em:HS114YA9" FT misc_feature 28452193..28452229 FT /note="match: STS: Em:HSB316ZD5" FT misc_feature 28452194..28452227 FT /note="match: GSS: Em:AQ288035" FT misc_feature 28452194..28452229 FT /note="match: STS: Em:AF003650 Em:AF009210 Em:G18799 FT Em:HS196XB4 Em:HS248WC5 Em:HS289ZG9 Em:HSA060XH5 FT Em:HUMVTR14K" FT /note="match: GSS: Em:AQ022330 Em:AQ218032 Em:AQ264186 FT Em:AQ289974 Em:B63764 Em:B74942" FT misc_feature 28452194..28452230 FT /note="match: GSS: Em:AQ078307 Em:AQ345246" FT misc_feature 28452194..28452233 FT /note="match: GSS: Em:AQ126650" FT misc_feature 28452195..28452229 FT /note="match: STS: Em:G02105 Em:G18912" FT misc_feature 28452195..28452230 FT /note="match: STS: Em:HSA351ZD5" FT misc_feature 28452196..28452230 FT /note="match: GSS: Em:AQ014122" FT misc_feature 28452197..28452229 FT /note="match: STS: Em:HS107YB6" FT misc_feature 28452198..28452230 FT /note="match: GSS: Em:AQ308019 Em:AQ308813" FT /note="match: STS: Em:G31524" FT misc_feature 28452199..28452229 FT /note="match: GSS: Em:AQ344923" FT misc_feature 28452199..28452230 FT /note="match: GSS: Em:AQ081992 Em:AQ261946 Em:AQ266005" FT /note="match: STS: Em:HS168YB4 Em:HSA051TB5" FT misc_feature 28452200..28452229 FT /note="match: STS: Em:HUMRPT50A" FT misc_feature complement(join(28419905..28419938,28452196..28452229)) FT /note="match: GSS: Em:B88807" FT misc_feature complement(28452194..28452229) FT /note="match: STS: Em:BOVILSTS05 Em:BT9591 Em:G09077 FT Em:G18729 Em:G18750 Em:G18963 Em:HRU92278 Em:HUMCHR8F" FT /note="match: GSS: Em:AQ115448 Em:AQ341248 Em:B44807 FT Em:B47960 Em:B87472" FT misc_feature complement(28452198..28452229) FT /note="match: STS: Em:HUMUT577" FT misc_feature complement(28452199..28452229) FT /note="match: STS: Em:AF019949" FT misc_feature complement(28452194..28452230) FT /note="match: GSS: Em:AQ064770 Em:AQ271958 Em:B41348 FT Em:B52154" FT misc_feature complement(28452195..28452230) FT /note="match: STS: Em:HUMUT5371" FT misc_feature complement(28452196..28452230) FT /note="match: GSS: Em:AQ179532" FT misc_feature complement(28452198..28452230) FT /note="match: GSS: Em:AQ339102" FT misc_feature 28452237..28452468 FT /note="match: STS: Em:HS168YB4" FT misc_feature complement(28452199..28452258) FT /note="match: GSS: Em:AQ070409" FT misc_feature complement(28452217..28452458) FT /note="match: STS: Em:AF009210" FT misc_feature complement(28457529..28457684) FT /note="match: GSS: Em:HSU94427" FT misc_feature 28473952..28474478 FT /note="match: STS: Em:AQ286620" FT /note="match: GSS: Em:AQ286620" FT misc_feature 28476834..28477014 FT /note="match: GSS: Em:HSU94430" FT misc_feature complement(join(28476774..28476998,28477323..28477392)) FT /note="match: STS: Em:R33050" FT repeat_region 28350046..28350165 FT /note="2 copies 60 mer 92% conserved" FT repeat_region 28350633..28350804 FT /note="2 copies 86 mer 95% conserved" FT repeat_region 28358266..28358685 FT /note="5 copies 84 mer 81% conserved" FT repeat_region 28358625..28358786 FT /note="2 copies 81 mer 81% conserved" FT repeat_region 28358706..28359293 FT /note="7 copies 84 mer 75% conserved" FT repeat_region 28361097..28361266 FT /note="85 copies 2 mer aa 59% conserved" FT repeat_region 28377965..28378040 FT /note="38 copies 2 mer at 68% conserved" FT repeat_region 28402251..28402670 FT /note="5 copies 84 mer 76% conserved" FT repeat_region 28417086..28417119 FT /note="17 copies 2 mer aa 82% conserved" FT repeat_region 28430339..28430380 FT /note="21 copies 2 mer ac 92% conserved" FT repeat_region 28432731..28432778 FT /note="24 copies 2 mer aa 72% conserved" FT repeat_region 28457444..28457527 FT /note="42 copies 2 mer tt 66% conserved" FT repeat_region 28467698..28467754 FT /note="19 copies 3 mer att 75% conserved" FT repeat_region 28471797..28471826 FT /note="15 copies 2 mer ca 96% conserved" FT repeat_region 28471828..28471913 FT /note="43 copies 2 mer ca 72% conserved" FT repeat_region 28474482..28474513 FT /note="16 copies 2 mer ac 96% conserved" FT repeat_region 28350813..28350904 FT /note="MIR repeat: matches 70..164 of consensus" FT repeat_region 28351698..28351924 FT /note="MIR repeat: matches 11..262 of consensus" FT repeat_region 28353332..28353534 FT /note="MIR repeat: matches 3..261 of consensus" FT repeat_region 28354598..28354901 FT /note="AluSc repeat: matches 1..303 of consensus" FT repeat_region 28355457..28355819 FT /note="MER87 repeat: matches 174..541 of consensus" FT repeat_region 28357272..28357436 FT /note="MER5A repeat: matches 1..188 of consensus" FT repeat_region 28358010..28358125 FT /note="L2 repeat: matches 2577..2696 of consensus" FT repeat_region 28359897..28359947 FT /note="L1MC4 repeat: matches 7858..7911 of consensus" FT repeat_region 28359948..28360252 FT /note="AluSg repeat: matches 1..307 of consensus" FT repeat_region 28360253..28360327 FT /note="L1MC4 repeat: matches 7795..7858 of consensus" FT repeat_region 28360905..28360999 FT /note="L2 repeat: matches 2395..2489 of consensus" FT repeat_region 28361272..28361531 FT /note="AluJo repeat: matches 37..301 of consensus" FT repeat_region 28362016..28362056 FT /note="MIR repeat: matches 75..115 of consensus" FT repeat_region 28362486..28362713 FT /note="L2 repeat: matches 1577..1816 of consensus" FT repeat_region 28362714..28363011 FT /note="AluSx repeat: matches 1..298 of consensus" FT repeat_region 28363012..28363501 FT /note="L2 repeat: matches 1816..2255 of consensus" FT repeat_region 28363581..28363784 FT /note="L2 repeat: matches 2388..2592 of consensus" FT repeat_region 28363797..28364008 FT /note="AluJo repeat: matches 82..300 of consensus" FT repeat_region 28364010..28364149 FT /note="L2 repeat: matches 2601..2742 of consensus" FT repeat_region 28364370..28364680 FT /note="AluSx repeat: matches 1..312 of consensus" FT repeat_region 28364806..28365062 FT /note="MER20 repeat: matches 1..218 of consensus" FT repeat_region 28366413..28366724 FT /note="AluY repeat: matches 1..296 of consensus" FT repeat_region 28367991..28368467 FT /note="L1MC/D repeat: matches 4205..4715 of consensus" FT repeat_region 28368526..28368901 FT /note="L1MC/D repeat: matches 4810..5203 of consensus" FT repeat_region 28368932..28369311 FT /note="L1MC/D repeat: matches 5260..5657 of consensus" FT repeat_region 28369507..28369808 FT /note="L2 repeat: matches 1564..1870 of consensus" FT repeat_region 28370729..28370945 FT /note="MLT1G repeat: matches 12..228 of consensus" FT repeat_region 28371234..28371313 FT /note="MLT1F repeat: matches 458..540 of consensus" FT repeat_region 28371597..28372860 FT /note="L1PA6 repeat: matches 4876..6143 of consensus" FT repeat_region 28373107..28373418 FT /note="AluSx repeat: matches 1..312 of consensus" FT repeat_region 28374387..28374539 FT /note="FRAM repeat: matches 8..159 of consensus" FT repeat_region 28375374..28375428 FT /note="MER74A repeat: matches 237..292 of consensus" FT repeat_region 28378047..28378081 FT /note="U2 repeat: matches 1..35 of consensus" FT repeat_region 28378144..28378276 FT /note="AluJo/FLAM repeat: matches 1..168 of consensus" FT repeat_region 28378277..28378311 FT /note="AluSp repeat: matches 132..166 of consensus" FT repeat_region 28378315..28379058 FT /note="L1M1 repeat: matches 5037..5792 of consensus" FT repeat_region 28379060..28379173 FT /note="AluY repeat: matches 191..304 of consensus" FT repeat_region 28379179..28379821 FT /note="L1M1 repeat: matches 4376..5034 of consensus" FT repeat_region 28379908..28380220 FT /note="AluJo repeat: matches 1..304 of consensus" FT repeat_region 28380230..28380567 FT /note="MLT1A1 repeat: matches 1..365 of consensus" FT repeat_region 28380681..28380969 FT /note="AluSg repeat: matches 1..310 of consensus" FT repeat_region 28381232..28381537 FT /note="AluJb repeat: matches 2..312 of consensus" FT repeat_region 28381866..28382041 FT /note="L2 repeat: matches 2469..2658 of consensus" FT repeat_region 28382169..28382336 FT /note="L1ME repeat: matches 968..1130 of consensus" FT repeat_region 28382337..28382635 FT /note="AluSq repeat: matches 1..312 of consensus" FT repeat_region 28382636..28382960 FT /note="L1ME repeat: matches 623..968 of consensus" FT repeat_region 28384123..28384216 FT /note="MER5A repeat: matches 62..189 of consensus" FT repeat_region 28384548..28384846 FT /note="AluY repeat: matches 1..301 of consensus" FT repeat_region 28385011..28385099 FT /note="MIR repeat: matches 116..206 of consensus" FT repeat_region 28385132..28385169 FT /note="MIR repeat: matches 7..44 of consensus" FT repeat_region 28385408..28385517 FT /note="FLAM_C repeat: matches 1..111 of consensus" FT repeat_region 28385575..28385685 FT /note="L1MA1 repeat: matches 6194..6304 of consensus" FT repeat_region 28385688..28385991 FT /note="AluY repeat: matches 1..304 of consensus" FT repeat_region 28385994..28386156 FT /note="FRAM repeat: matches 2..164 of consensus" FT repeat_region 28386618..28386927 FT /note="AluJo repeat: matches 1..309 of consensus" FT repeat_region 28388469..28390011 FT /note="L1MC5 repeat: matches 6422..7931 of consensus" FT repeat_region 28391868..28393094 FT /note="TIGGER1 repeat: matches 1141..2418 of consensus" FT repeat_region 28393095..28393382 FT /note="AluJb repeat: matches 23..310 of consensus" FT repeat_region 28393383..28394539 FT /note="TIGGER1 repeat: matches 1..1141 of consensus" FT repeat_region 28394597..28394869 FT /note="AluSq repeat: matches 1..290 of consensus" FT repeat_region 28394955..28395061 FT /note="L2 repeat: matches 1344..1447 of consensus" FT repeat_region 28395134..28395481 FT /note="MER7A repeat: matches 1..346 of consensus" FT repeat_region 28395575..28395860 FT /note="AluSp repeat: matches 1..292 of consensus" FT repeat_region 28396755..28396781 FT /note="Alu repeat: matches 245..271 of consensus" FT repeat_region 28399129..28399225 FT /note="MER94 repeat: matches 1..99 of consensus" FT repeat_region 28399253..28399358 FT /note="MER5A repeat: matches 31..138 of consensus" FT repeat_region 28401065..28401155 FT /note="MIR repeat: matches 50..149 of consensus" FT repeat_region 28403037..28403191 FT /note="L2 repeat: matches 2554..2710 of consensus" FT repeat_region 28405140..28405386 FT /note="AluSx repeat: matches 64..309 of consensus" FT repeat_region 28405866..28406172 FT /note="AluSx repeat: matches 2..308 of consensus" FT repeat_region 28406239..28406614 FT /note="THE1C repeat: matches 1..369 of consensus" FT repeat_region 28406880..28407163 FT /note="AluSg repeat: matches 1..293 of consensus" FT repeat_region 28407279..28407387 FT /note="L2 repeat: matches 2627..2739 of consensus" FT repeat_region 28407397..28407651 FT /note="MIR repeat: matches 12..262 of consensus" FT repeat_region 28407709..28408259 FT /note="L2 repeat: matches 2019..2606 of consensus" FT repeat_region 28409652..28409953 FT /note="AluSq repeat: matches 1..302 of consensus" FT repeat_region 28409973..28410112 FT /note="MIR repeat: matches 85..232 of consensus" FT repeat_region 28410453..28410713 FT /note="MIR repeat: matches 3..241 of consensus" FT repeat_region 28411449..28411543 FT /note="MIR repeat: matches 114..211 of consensus" FT repeat_region 28411603..28411715 FT /note="L1MC4 repeat: matches 6886..6996 of consensus" FT repeat_region 28411716..28411958 FT /note="AluSg repeat: matches 1..296 of consensus" FT repeat_region 28411959..28412182 FT /note="L1MC4 repeat: matches 6654..6886 of consensus" FT repeat_region 28412195..28412939 FT /note="LTR12 repeat: matches 16..671 of consensus" FT repeat_region 28413284..28413531 FT /note="L1MC4 repeat: matches 6347..6594 of consensus" FT repeat_region 28413986..28414115 FT /note="L1PA8 repeat: matches 5696..5825 of consensus" FT repeat_region 28414314..28414669 FT /note="L1ME3A repeat: matches 5493..5890 of consensus" FT repeat_region 28417125..28417378 FT /note="L1ME3A repeat: matches 5896..6156 of consensus" FT repeat_region 28417550..28417855 FT /note="AluSq repeat: matches 1..307 of consensus" FT repeat_region 28418023..28418253 FT /note="AluY repeat: matches 58..293 of consensus" FT repeat_region 28418471..28418742 FT /note="L2 repeat: matches 1658..1978 of consensus" FT repeat_region 28418751..28419632 FT /note="L1MA4A repeat: matches 5395..6300 of consensus" FT repeat_region 28419633..28419800 FT /note="AluJb repeat: matches 146..309 of consensus" FT repeat_region 28419985..28420293 FT /note="AluSg repeat: matches 1..305 of consensus" FT repeat_region 28420295..28420428 FT /note="L1ME repeat: matches 5665..5818 of consensus" FT repeat_region 28421381..28421437 FT /note="Alu repeat: matches 239..298 of consensus" FT repeat_region 28421663..28421809 FT /note="MER69A repeat: matches 39..177 of consensus" FT repeat_region 28421813..28422151 FT /note="L1MA4A repeat: matches 4881..5219 of consensus" FT repeat_region 28422240..28422335 FT /note="HERV16 repeat: matches 4588..4686 of consensus" FT repeat_region 28422568..28422949 FT /note="HERV16 repeat: matches 4064..4448 of consensus" FT repeat_region 28423203..28423414 FT /note="LTR16B repeat: matches 25..234 of consensus" FT repeat_region 28424963..28425950 FT /note="L1MC1 repeat: matches 5263..6259 of consensus" FT repeat_region 28426772..28426897 FT /note="FLAM_C repeat: matches 5..127 of consensus" FT repeat_region 28427464..28427866 FT /note="L2 repeat: matches 2326..2748 of consensus" FT repeat_region 28428638..28428931 FT /note="AluSc repeat: matches 1..294 of consensus" FT repeat_region 28429916..28430093 FT /note="HAL1 repeat: matches 175..363 of consensus" FT repeat_region 28430688..28431120 FT /note="HAL1 repeat: matches 404..875 of consensus" FT repeat_region 28431890..28432191 FT /note="AluJb repeat: matches 1..301 of consensus" FT repeat_region 28432399..28432729 FT /note="AluSx repeat: matches 1..309 of consensus" FT repeat_region 28434649..28434771 FT /note="MIR repeat: matches 88..218 of consensus" FT repeat_region 28434932..28435225 FT /note="AluSx repeat: matches 1..300 of consensus" FT repeat_region 28435905..28435962 FT /note="AluJ/FLAM repeat: matches 11..73 of consensus" FT repeat_region 28436286..28437693 FT /note="pTR5 repeat: matches 743..2425 of consensus" FT repeat_region 28438432..28438722 FT /note="AluSx repeat: matches 1..293 of consensus" FT repeat_region 28438922..28439062 FT /note="L1MEc repeat: matches 496..643 of consensus" FT repeat_region 28439062..28439356 FT /note="L1MD3 repeat: matches 6609..6902 of consensus" FT repeat_region 28439431..28439830 FT /note="L1MC3 repeat: matches 6212..6609 of consensus" FT repeat_region 28440067..28440198 FT /note="AluY repeat: matches 1..132 of consensus" FT repeat_region 28441431..28441676 FT /note="L2 repeat: matches 2531..2747 of consensus" FT repeat_region 28442329..28442402 FT /note="tRNA-Thr-ACT repeat: matches 1..74 of consensus" FT repeat_region 28443382..28443697 FT /note="AluSx repeat: matches 1..311 of consensus" FT repeat_region 28444907..28445395 FT /note="MLT1D repeat: matches 1..505 of consensus" FT repeat_region 28445405..28445613 FT /note="MIR repeat: matches 58..262 of consensus" FT repeat_region 28446400..28446481 FT /note="tRNA-Leu-CTT repeat: matches 1..82 of consensus" FT repeat_region 28447258..28447389 FT /note="MIR repeat: matches 53..146 of consensus" FT repeat_region 28447390..28447573 FT /note="L1PB1 repeat: matches 5964..6155 of consensus" FT repeat_region 28447574..28447676 FT /note="MIR repeat: matches 146..260 of consensus" FT repeat_region 28448504..28448575 FT /note="tRNA-Met-e repeat: matches 1..72 of consensus" FT repeat_region 28448805..28448987 FT /note="MLT1D repeat: matches 321..505 of consensus" FT repeat_region 28449990..28450221 FT /note="L1M4 repeat: matches 4480..4718 of consensus" FT repeat_region 28450268..28450354 FT /note="HERVL repeat: matches 4479..4567 of consensus" FT repeat_region 28450626..28450729 FT /note="AluJb repeat: matches 209..312 of consensus" FT repeat_region 28451009..28451553 FT /note="L1M4 repeat: matches 3292..3841 of consensus" FT repeat_region 28451583..28451630 FT /note="Alu repeat: matches 130..172 of consensus" FT repeat_region 28451665..28452189 FT /note="L1M4 repeat: matches 2759..3296 of consensus" FT repeat_region 28452334..28452634 FT /note="AluYa5 repeat: matches 1..301 of consensus" FT repeat_region 28452672..28452815 FT /note="AluSg/x repeat: matches 132..274 of consensus" FT repeat_region 28453153..28453831 FT /note="LTR8 repeat: matches 1..691 of consensus" FT repeat_region 28454049..28454250 FT /note="MLT1C repeat: matches 273..466 of consensus" FT repeat_region 28454251..28454948 FT /note="LTR8 repeat: matches 1..691 of consensus" FT repeat_region 28454949..28455133 FT /note="MLT1C repeat: matches 86..273 of consensus" FT repeat_region 28455133..28455487 FT /note="MER83 repeat: matches 1..372 of consensus" FT repeat_region 28455488..28455611 FT /note="LTR8 repeat: matches 1..119 of consensus" FT repeat_region 28456041..28456239 FT /note="AluSx repeat: matches 1..300 of consensus" FT repeat_region 28456240..28456297 FT /note="AluSx repeat: matches 241..298 of consensus" FT repeat_region 28456770..28456843 FT /note="tRNA-Thr-ACT repeat: matches 1..74 of consensus" FT repeat_region 28458604..28458668 FT /note="tRNA-Leu-CTT repeat: matches 1..65 of consensus" FT repeat_region 28458824..28459188 FT /note="LTR13 repeat: matches 1..362 of consensus" FT repeat_region 28459191..28459826 FT /note="LTR13 repeat: matches 311..945 of consensus" FT repeat_region 28460197..28460279 FT /note="MIR repeat: matches 178..262 of consensus" FT repeat_region 28461837..28461956 FT /note="L2 repeat: matches 1663..1790 of consensus" FT repeat_region 28462995..28463291 FT /note="AluSx repeat: matches 1..298 of consensus" FT repeat_region 28464121..28464403 FT /note="AluJb repeat: matches 1..311 of consensus" FT repeat_region 28464718..28465050 FT /note="MER31A repeat: matches 84..466 of consensus" FT repeat_region 28465095..28465860 FT /note="MER21B repeat: matches 7..790 of consensus" FT repeat_region 28465837..28465950 FT /note="MER21B repeat: matches 591..789 of consensus" FT repeat_region 28465974..28466024 FT /note="MER31A repeat: matches 1..51 of consensus" FT repeat_region 28466269..28466445 FT /note="MER5A repeat: matches 4..189 of consensus" FT repeat_region 28466673..28466804 FT /note="LTR16A repeat: matches 89..211 of consensus" FT repeat_region 28466884..28467011 FT /note="LTR16C repeat: matches 260..385 of consensus" FT repeat_region 28468561..28468873 FT /note="AluSq repeat: matches 1..313 of consensus" FT repeat_region 28469292..28470912 FT /note="SVA repeat: matches 3..1385 of consensus" FT repeat_region 28475345..28475621 FT /note="AluSx repeat: matches 25..299 of consensus" FT repeat_region 28475622..28475672 FT /note="AluS repeat: matches 1..52 of consensus" FT repeat_region 28476301..28476588 FT /note="AluSx repeat: matches 1..287 of consensus" FT repeat_region 28477015..28477322 FT /note="AluSx repeat: matches 1..296 of consensus" FT repeat_region 28477762..28477883 FT /note="MER90 repeat: matches 1..121 of consensus" FT CDS complement(<28554075..>28554500) FT /codon_start=1 FT /gene="dJ1186N24.3" FT /product="dJ1186N24.3 (novel zinc finger protein)" FT /note="match: cDNAs: Em:AF011573 Em:U62392 Em:X84801 FT Em:D10630 Em:U68536 Em:U31248 Em:D88827 Em:AB007407 FT Em:AB023232 Em:U41671 Em:U62908 Em:AB007886 Em:AF149093 FT Em:X63747" FT /note="match: proteins: Tr:Q9Z1D8 Tr:Q9Z1D7 Tr:O15535 FT Tr:O60388 Sw:O14754 Sw:P49910 Tr:Q15776 Sw:Q07231 Tr:O43309 FT Tr:O43724 Tr:O60817 Sw:P17028 Tr:O43387 Tr:O60893 FT Tr:Q39346" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAB71122.1" FT /translation="LGMEAVSRVFPALAGQAPEEQGEIIKVKVKEEDHTWDQESALRRN FT LSYTRELSRQRFRQFCYQETPGPREALSQLRELCRQWLNPEIHTKEQILELLVLEQFLT FT ILPEELQSWVREHNPESGEEVVTLLEDLERELDEPRQQ" FT mRNA join(28493702..28493877,28497228..28497381, FT 28499555..28499672,28500098..28500197,28501738..28502727) FT /gene="GPX5" FT /product="dJ1186N24.2 (glutathione peroxidase 5 (epididymal FT androgen-related protein))" FT /note="match: cDNAs: Em:X62404 Em:D37916 Em:X62403 FT Em:AJ005277 Em:X58295 Em:D00632 Em:AF045185 Em:U13705 FT Em:X53780 Em:L10325 Em:D00680 Em:M76733 Em:X12367" FT /note="match: ESTs: Em:AI099227 Em:AA108593 Em:AA105239 FT Em:W18909 Em:AI207120" FT /inference="non-experimental evidence, no additional FT details recorded" FT polyA_site 28502727 FT polyA_signal 28502705..28502710 FT CDS join(28493791..28493877,28497228..28497381, FT 28499555..28499672,28500098..28500197,28501738..28501944) FT /gene="GPX5" FT /product="dJ1186N24.2 (glutathione peroxidase 5 (epididymal FT androgen-related protein))" FT /note="match: proteins: Sw:P28714 Sw:O75715 Sw:P21765 FT Sw:P30710 Sw:O18994 Sw:O46607 Sw:P23764 Sw:P46412 Sw:P37141 FT Sw:P22352" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="CAB71121.1" FT /translation="MTTQLRVVHLLPLLLACFVQTSPKQEKMKMDCHKDEKGTIYDYEA FT IALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQF FT GKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEIL FT GTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQFKTK" FT misc_feature complement(28479476..28479997) FT /note="CpG island" FT /inference="non-experimental evidence, no additional FT details recorded" FT CDS complement(<28478528..28478681) FT /pseudo FT /gene="dJ1186N24.1" FT /note="dJ1186N24.1 (glutathion peroxidase pseudogene)" FT /note="continues in Em:Z98745 as dJ29K1.1" FT /note="match: proteins: Sw:P22352 Tr:Q9MZE1 Sw:P37141 FT Sw:P21765 Sw:Q64625 Sw:P23764 Sw:P46412 Sw:P28714 Sw:O18994 FT Sw:O75715 Sw:P30710 Sw:O46607" FT /inference="non-experimental evidence, no additional FT details recorded" FT misc_feature 28559319..28560174 FT /note="match: GSS: Em:AQ788005" FT misc_feature 28557321..28557809 FT /note="match: GSS: Em:AQ726102" FT misc_feature complement(28554039..28554224) FT /note="match: GSS: Em:AZ735697" FT misc_feature 28553850..28554301 FT /note="match: GSS: Em:AQ225623" FT misc_feature 28552996..28553448 FT /note="match: GSS: Em:B33098" FT misc_feature complement(28541312..28541595) FT /note="match: GSS: Em:B78859" FT misc_feature complement(28540730..28541281) FT /note="match: GSS: Em:AQ373495" FT misc_feature complement(28540886..28541267) FT /note="match: GSS: Em:AQ413649" FT misc_feature complement(28538809..28539295) FT /note="match: GSS: Em:AQ375107" FT misc_feature complement(28538659..28539293) FT /note="match: GSS: Em:AQ542165" FT misc_feature complement(28538775..28539291) FT /note="match: GSS: Em:AQ353856" FT misc_feature 28539275..28539679 FT /note="match: GSS: Em:AQ776190" FT misc_feature complement(28534431..28534847) FT /note="match: GSS: Em:AQ734804" FT misc_feature 28528642..28529259 FT /note="match: GSS: Em:AQ115078" FT misc_feature complement(28527955..28528639) FT /note="match: GSS: Em:AQ043605" FT misc_feature complement(28525496..28525869) FT /note="match: STS: Em:AF192016" FT misc_feature complement(28525650..28525866) FT /note="match: GSS: Em:AQ478796" FT misc_feature complement(28525730..28525861) FT /note="match: GSS: Em:B63757" FT misc_feature complement(28525727..28525861) FT /note="match: GSS: Em:AQ427873" FT misc_feature complement(28525671..28525846) FT /note="match: GSS: Em:AQ742341" FT misc_feature 28525719..28525844 FT /note="match: GSS: Em:AQ235880" FT misc_feature 28525671..28525829 FT /note="match: GSS: Em:AQ198110" FT misc_feature 28525664..28525856 FT /note="match: GSS: Em:AQ345494" FT misc_feature 28525517..28525854 FT /note="match: GSS: Em:AQ542779" FT misc_feature 28525511..28525829 FT /note="match: GSS: Em:AQ198116" FT misc_feature 28525208..28525497 FT /note="match: STS: Em:HS179M20S" FT misc_feature complement(28519837..28520352) FT /note="match: GSS: Em:AQ775092" FT misc_feature 28505368..28505458 FT /note="match: GSS: Em:AZ176119" FT misc_feature 28500065..28500285 FT /note="match: STS: Em:G66705" FT misc_feature 28499480..28499734 FT /note="match: STS: Em:G66704" FT misc_feature 28491623..28491959 FT /note="match: GSS: Em:AQ803507" FT misc_feature complement(28491144..28491614) FT /note="match: GSS: Em:AQ709271" FT misc_feature complement(28487457..28488051) FT /note="match: GSS: Em:AQ893999" FT misc_feature 28486990..28487392 FT /note="match: GSS: Em:AQ172399" FT misc_feature complement(28486687..28486986) FT /note="match: GSS: Em:AQ830845" FT misc_feature 28485546..28485968 FT /note="match: GSS: Em:AQ468381" FT misc_feature 28482200..28482589 FT /note="match: GSS: Em:AQ139613" FT misc_feature complement(28481780..28482185) FT /note="match: GSS: Em:AQ723422" FT repeat_region complement(28569888..28569931) FT /note="22 copies 2 mer aa 77% conserved" FT repeat_region complement(28557609..28557650) FT /note="21 copies 2 mer aa 88% conserved" FT repeat_region complement(28521257..28521464) FT /note="8 copies 26 mer 62% conserved" FT repeat_region complement(28521257..28521406) FT /note="75 copies 2 mer ct 64% conserved" FT repeat_region complement(28519828..28519855) FT /note="14 copies 2 mer gt 89% conserved" FT repeat_region complement(28512335..28512386) FT /note="2 copies 26 mer 94% conserved" FT repeat_region complement(28512321..28512380) FT /note="30 copies 2 mer cc 70% conserved" FT repeat_region complement(28510034..28510093) FT /note="30 copies 2 mer aa 68% conserved" FT repeat_region complement(28496552..28496629) FT /note="3 copies 26 mer 88% conserved" FT repeat_region complement(28494063..28494114) FT /note="2 copies 26 mer 100% conserved" FT repeat_region complement(28487002..28487039) FT /note="19 copies 2 mer aa 78% conserved" FT repeat_region complement(28486675..28486714) FT /note="20 copies 2 mer tg 97% conserved" FT repeat_region complement(28573330..28573390) FT /note="Alu repeat: matches 2..62 of consensus" FT repeat_region complement(28573219..28573310) FT /note="L1MC4 repeat: matches 7364..7463 of consensus" FT repeat_region complement(28572112..28572410) FT /note="AluSx repeat: matches 1..300 of consensus" FT repeat_region complement(28571708..28571970) FT /note="MLT1H repeat: matches 13..317 of consensus" FT repeat_region complement(28571505..28571589) FT /note="MLT1H repeat: matches 391..502 of consensus" FT repeat_region complement(28571084..28571502) FT /note="HAL1 repeat: matches 352..779 of consensus" FT repeat_region complement(28571056..28571455) FT /note="L1M4c repeat: matches 1503..1913 of consensus" FT repeat_region complement(28570734..28571034) FT /note="AluY repeat: matches 1..305 of consensus" FT repeat_region complement(28569990..28570284) FT /note="AluSx repeat: matches 1..297 of consensus" FT repeat_region complement(28569317..28569593) FT /note="AluSg repeat: matches 3..278 of consensus" FT repeat_region complement(28568999..28569200) FT /note="L1MC4 repeat: matches 7742..7960 of consensus" FT repeat_region complement(28568677..28568981) FT /note="AluY repeat: matches 1..301 of consensus" FT repeat_region complement(28568639..28568676) FT /note="MER4B repeat: matches 499..538 of consensus" FT repeat_region complement(28568132..28568424) FT /note="AluSx repeat: matches 5..300 of consensus" FT repeat_region complement(28567553..28568127) FT /note="L1MC/D repeat: matches 4914..5436 of consensus" FT repeat_region complement(28567212..28567552) FT /note="THE1B repeat: matches 1..364 of consensus" FT repeat_region complement(28566685..28567211) FT /note="L1MC/D repeat: matches 4275..4914 of consensus" FT repeat_region complement(28566386..28566683) FT /note="AluYb8 repeat: matches 47..318 of consensus" FT repeat_region complement(28565913..28566004) FT /note="MIR repeat: matches 35..136 of consensus" FT repeat_region complement(28565117..28565198) FT /note="tRNA-Ser-AGC repeat: matches 1..82 of consensus" FT repeat_region complement(28563733..28564075) FT /note="L1PA7 repeat: matches 5491..5830 of consensus" FT repeat_region complement(28563218..28563525) FT /note="AluSq repeat: matches 1..309 of consensus" FT repeat_region complement(28562856..28563127) FT /note="AluJb repeat: matches 1..302 of consensus" FT repeat_region complement(28562442..28562775) FT /note="L1MA7 repeat: matches 5783..6098 of consensus" FT repeat_region complement(28562150..28562441) FT /note="AluSq repeat: matches 1..297 of consensus" FT repeat_region complement(28561843..28562149) FT /note="L1MA7 repeat: matches 5471..5783 of consensus" FT repeat_region complement(28561468..28561793) FT /note="AluJo repeat: matches 4..312 of consensus" FT repeat_region complement(28561171..28561466) FT /note="AluSx repeat: matches 2..296 of consensus" FT repeat_region complement(28559871..28561154) FT /note="L1MA7 repeat: matches 4134..5466 of consensus" FT repeat_region complement(28559731..28559871) FT /note="L1MA7 repeat: matches 3840..3977 of consensus" FT repeat_region complement(28559166..28559554) FT /note="MER31A repeat: matches 3..466 of consensus" FT repeat_region complement(28557156..28557227) FT /note="tRNA-Gln-CAA repeat: matches 1..72 of consensus" FT repeat_region complement(28556823..28556922) FT /note="MER69 repeat: matches 2407..2510 of consensus" FT repeat_region complement(28556628..28556816) FT /note="MER69 repeat: matches 1..203 of consensus" FT repeat_region complement(28555524..28555634) FT /note="MIR repeat: matches 32..150 of consensus" FT repeat_region complement(28553602..28553770) FT /note="MIR repeat: matches 43..217 of consensus" FT repeat_region complement(28552443..28552660) FT /note="TIGGER1 repeat: matches 863..1021 of consensus" FT repeat_region complement(28551946..28552366) FT /note="TIGGER1 repeat: matches 1055..1476 of consensus" FT repeat_region complement(28550888..28551178) FT /note="AluY repeat: matches 1..301 of consensus" FT repeat_region complement(28550417..28550725) FT /note="AluSc repeat: matches 1..307 of consensus" FT repeat_region complement(28549926..28550143) FT /note="MER30 repeat: matches 2..230 of consensus" FT repeat_region complement(28549228..28549697) FT /note="MLT1J repeat: matches 3..466 of consensus" FT repeat_region complement(28548832..28549131) FT /note="AluJb repeat: matches 1..299 of consensus" FT repeat_region complement(28547938..28548234) FT /note="AluSx repeat: matches 2..298 of consensus" FT repeat_region complement(28547542..28547662) FT /note="AluSq/x repeat: matches 1..121 of consensus" FT repeat_region complement(28545160..28545911) FT /note="LTR39 repeat: matches 1..794 of consensus" FT repeat_region complement(28544555..28544686) FT /note="AluYb8 repeat: matches 1..132 of consensus" FT repeat_region complement(28544040..28544340) FT /note="AluSx repeat: matches 1..297 of consensus" FT repeat_region complement(28539701..28541066) FT /note="Charlie1 repeat: matches 1140..2513 of consensus" FT repeat_region complement(28538809..28539099) FT /note="AluSx repeat: matches 1..291 of consensus" FT repeat_region complement(28535682..28535987) FT /note="AluSg repeat: matches 1..307 of consensus" FT repeat_region complement(28534723..28535182) FT /note="LTR2 repeat: matches 1..449 of consensus" FT repeat_region complement(28534511..28534655) FT /note="FRAM repeat: matches 1..145 of consensus" FT repeat_region complement(28534017..28534462) FT /note="LTR2 repeat: matches 18..449 of consensus" FT repeat_region complement(28533781..28533911) FT /note="L1M4 repeat: matches 4690..4830 of consensus" FT repeat_region complement(28533290..28533665) FT /note="L1M4 repeat: matches 4999..5403 of consensus" FT repeat_region complement(28533027..28533289) FT /note="AluSq repeat: matches 1..295 of consensus" FT repeat_region complement(28532471..28532643) FT /note="L1ME2 repeat: matches 6162..6313 of consensus" FT repeat_region complement(28530517..28530812) FT /note="AluSg repeat: matches 1..305 of consensus" FT repeat_region complement(28529306..28529629) FT /note="AluSg1 repeat: matches 1..309 of consensus" FT repeat_region complement(28528204..28528340) FT /note="L2 repeat: matches 1226..1362 of consensus" FT repeat_region complement(28528156..28528196) FT /note="L2 repeat: matches 2709..2749 of consensus" FT repeat_region complement(28527128..28527269) FT /note="MER5A repeat: matches 4..169 of consensus" FT repeat_region complement(28526776..28527127) FT /note="MLT1A1 repeat: matches 1..365 of consensus" FT repeat_region complement(28526752..28526775) FT /note="MER5A repeat: matches 169..189 of consensus" FT repeat_region complement(28526592..28526743) FT /note="MER5A repeat: matches 9..189 of consensus" FT repeat_region complement(28525508..28525835) FT /note="AluY repeat: matches 3..305 of consensus" FT repeat_region complement(28525210..28525496) FT /note="AluSg repeat: matches 1..285 of consensus" FT repeat_region complement(28524421..28524951) FT /note="L2 repeat: matches 2241..2750 of consensus" FT repeat_region complement(28523971..28524116) FT /note="AluJb repeat: matches 1..132 of consensus" FT repeat_region complement(28523680..28523970) FT /note="AluSx repeat: matches 24..312 of consensus" FT repeat_region complement(28523550..28523679) FT /note="AluJb repeat: matches 132..302 of consensus" FT repeat_region complement(28523365..28523459) FT /note="L1MA4 repeat: matches 6204..6296 of consensus" FT repeat_region complement(28522491..28522646) FT /note="LTR41 repeat: matches 585..762 of consensus" FT repeat_region complement(28521705..28522261) FT /note="LTR31 repeat: matches 1..619 of consensus" FT repeat_region complement(28521469..28521626) FT /note="LTR41 repeat: matches 1..167 of consensus" FT repeat_region complement(28520762..28521170) FT /note="L1MC3 repeat: matches 5639..6033 of consensus" FT repeat_region complement(28520547..28520758) FT /note="L1M4 repeat: matches 4684..4902 of consensus" FT repeat_region complement(28519589..28519649) FT /note="L1M4 repeat: matches 4696..4756 of consensus" FT repeat_region complement(28519195..28519590) FT /note="L1M4 repeat: matches 2673..3071 of consensus" FT repeat_region complement(28518717..28519179) FT /note="L1M3c repeat: matches 968..1434 of consensus" FT repeat_region complement(28518303..28518715) FT /note="MSTD repeat: matches 1..394 of consensus" FT repeat_region complement(28517516..28518302) FT /note="MSTD-internal repeat: matches 805..1651 of FT consensus" FT repeat_region complement(28516868..28517382) FT /note="MER21B repeat: matches 1..477 of consensus" FT repeat_region complement(28515986..28516859) FT /note="L1 repeat: matches 3326..4227 of consensus" FT repeat_region complement(28514772..28515976) FT /note="L1PB2 repeat: matches 4975..6155 of consensus" FT repeat_region complement(28514434..28514772) FT /note="L1 repeat: matches 4217..4596 of consensus" FT repeat_region complement(28513919..28514333) FT /note="L1ME3A repeat: matches 5647..6055 of consensus" FT repeat_region complement(28512626..28512922) FT /note="L1M4 repeat: matches 3473..3786 of consensus" FT repeat_region complement(28512387..28512483) FT /note="FLAM_A repeat: matches 39..128 of consensus" FT repeat_region complement(28512244..28512318) FT /note="AluS repeat: matches 1..59 of consensus" FT repeat_region complement(28510892..28510963) FT /note="tRNA-Arg-CGA repeat: matches 1..72 of consensus" FT repeat_region complement(28510119..28510151) FT /note="MER21B repeat: matches 317..349 of consensus" FT repeat_region complement(28509596..28509847) FT /note="AluSc repeat: matches 58..304 of consensus" FT repeat_region complement(28509209..28509474) FT /note="L1ME2 repeat: matches 5896..6155 of consensus" FT repeat_region complement(28509175..28509212) FT /note="L1M4b repeat: matches -153..-118 of consensus" FT repeat_region complement(28508973..28509174) FT /note="AluSg repeat: matches 2..204 of consensus" FT repeat_region complement(28508863..28508972) FT /note="L1M4b repeat: matches -274..-153 of consensus" FT repeat_region complement(28508399..28508778) FT /note="HAL1 repeat: matches 932..1348 of consensus" FT repeat_region complement(28508229..28508354) FT /note="HAL1 repeat: matches 706..838 of consensus" FT repeat_region complement(28506943..28507457) FT /note="MLT1H repeat: matches 60..547 of consensus" FT repeat_region complement(28506635..28506942) FT /note="AluSx repeat: matches 1..303 of consensus" FT repeat_region complement(28505725..28505927) FT /note="AluJb repeat: matches 1..293 of consensus" FT repeat_region complement(28504137..28504497) FT /note="HERV16 repeat: matches 913..1288 of consensus" FT repeat_region complement(28503707..28503938) FT /note="AluJo repeat: matches 8..237 of consensus" FT repeat_region complement(28503315..28503700) FT /note="HERV16 repeat: matches 102..491 of consensus" FT repeat_region complement(28502856..28503226) FT /note="LTR16A repeat: matches 66..448 of consensus" FT repeat_region complement(28501109..28501186) FT /note="AluJ/FRAM repeat: matches 227..303 of consensus" FT repeat_region complement(28500610..28500918) FT /note="AluJo repeat: matches 1..303 of consensus" FT repeat_region complement(28500468..28500594) FT /note="L2 repeat: matches 2575..2710 of consensus" FT repeat_region complement(28499364..28499481) FT /note="MIR repeat: matches 28..144 of consensus" FT repeat_region complement(28499203..28499351) FT /note="MER5B repeat: matches 29..178 of consensus" FT repeat_region complement(28498952..28499175) FT /note="AluSg/x repeat: matches 87..308 of consensus" FT repeat_region complement(28497521..28497750) FT /note="MER58A repeat: matches 1..222 of consensus" FT repeat_region complement(28496633..28497041) FT /note="L1MA2 repeat: matches 5881..6292 of consensus" FT repeat_region complement(28496101..28496203) FT /note="MIR repeat: matches 43..148 of consensus" FT repeat_region complement(28492429..28492871) FT /note="L1PA13 repeat: matches 5710..6156 of consensus" FT repeat_region complement(28490918..28491011) FT /note="MIR repeat: matches 79..182 of consensus" FT repeat_region complement(28489704..28490001) FT /note="AluSq repeat: matches 1..297 of consensus" FT repeat_region complement(28489418..28489462) FT /note="MIR repeat: matches 67..111 of consensus" FT repeat_region complement(28487098..28487298) FT /note="MIR repeat: matches 20..255 of consensus" FT repeat_region complement(28486039..28486325) FT /note="AluJb repeat: matches 1..286 of consensus" FT repeat_region complement(28484231..28484344) FT /note="MIR repeat: matches 21..140 of consensus" FT repeat_region complement(28484022..28484208) FT /note="MIR repeat: matches 49..238 of consensus" FT repeat_region complement(28482389..28482533) FT /note="MER5A repeat: matches 35..189 of consensus" FT repeat_region complement(28480824..28481293) FT /note="LTR1 repeat: matches 314..784 of consensus" FT repeat_region complement(28480179..28480823) FT /note="LTR12 repeat: matches 1..1523 of consensus" FT repeat_region complement(28479435..28480178) FT /note="pTR5 repeat: matches 743..1523 of consensus" FT repeat_region complement(28479202..28479397) FT /note="LTR1 repeat: matches 17..253 of consensus" FT repeat_region complement(28477798..28478318) FT /note="MER90 repeat: matches 77..597 of consensus" FT misc_feature 28573391..28659242 FT /note="annotated region of clone" FT polyA_site complement(28616063) FT polyA_signal complement(28616082..28616087) FT mRNA complement(join(28616063..28616428,28616673..28616843)) FT /locus_tag="RP11-373N24.1-001" FT /product="chromosome 6 open reading frame 38" FT /note="match: ESTs: Em:AA913908.1 Em:AI187831.1 FT Em:AI688709.1" FT misc_feature 28659142 FT /note="Clone_right_end: RP11-373N24" FT misc_feature 28659243..28702184 FT /note="annotated region of clone" FT misc_feature 28680556 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1200bp by restriction digest data" FT CDS 28699794..28700681 FT /pseudo FT /locus_tag="XXbac-BPG308K3.7-001" FT /product="ribosomal protein SA pseudogene 2" FT /note="match: proteins: Sw:P08865.3 Sw:P08865.4 Sw:P14206.4 FT Sw:P26452.4 Sw:P38982.3 Sw:Q2L9X0.3 Sw:Q4GWZ2.3 Tr:Q6NSD1.1 FT Tr:Q6NXQ8.1 Tr:Q86VC0.1" FT misc_feature 28701985 FT /note="Clone_left_end: RP1-207F6" FT misc_feature 33460448..33582450 FT /note="annotated region of clone" FT misc_feature 33475679..33475826 FT /note="ET primer reads only" FT misc_feature 33488675..33488694 FT /note="weak data" FT misc_feature 33493160..33493207 FT /note="weak data" FT polyA_site complement(33540328) FT polyA_signal complement(33540345..33540350) FT CDS complement(join(33541580..33541684,33541811..33541991, FT 33543075..33543218,33543570..33543705,33545312..33545381)) FT /gene="BAK1" FT /locus_tag="RP1-291J10.1-002" FT /standard_name="OTTHUMP00000016211" FT /product="BCL2-antagonist/killer 1" FT /note="match: proteins: Sw:O08734 Sw:Q13014 Sw:Q16611 FT Tr:O77738" FT /protein_id="CAB65626.1" FT /translation="MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYRHQQ FT EQEAEGVAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTA FT ENAYEYFTKIATSLFESGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFML FT HHCIARWIAQRGGWVAALNLGNGPILNVLVVLGVVLLGQFVVRRFFKS" FT mRNA complement(join(33540329..33541684,33541811..33541991, FT 33543075..33543218,33543570..33543705,33545312..33545412, FT 33547802..33548019)) FT /gene="BAK1" FT /locus_tag="RP1-291J10.1-002" FT /product="BCL2-antagonist/killer 1" FT /note="match: ESTs: Em:AI472027 Em:H56462" FT /note="match: cDNAs: Em:AJ001204 Em:U16811 Em:U23765 FT Em:X84213 Em:Y13231" FT misc_feature 33582350 FT /note="Clone_right_end: RP1-291J10" FT misc_feature 33582451..33716600 FT /note="annotated region of clone" FT mRNA join(33588522..33589468,33608261..33608331, FT 33623543..33623664,33625709..33625795,33626447..33626605, FT 33626798..33626896,33627243..33627326,33630305..33630451, FT 33630688..33630783,33631277..33631327,33631515..33631657, FT 33632647..33632746,33632830..33632990,33633612..33633753, FT 33634906..33635067,33635569..33635741,33636292..33636411, FT 33636751..33636933,33638102..33638353,33638448..33638592, FT 33638942..33639083,33639806..33640005,33641368..33641497, FT 33641985..33642042,33643468..33643633,33644545..33644709, FT 33644792..33644866,33645281..33645406,33646198..33646320, FT 33646416..33646616,33647659..33647910,33648106..33648231, FT 33648332..33648457,33650301..33650421,33650984..33651174, FT 33651797..33651945,33652134..33652242,33652375..33652465, FT 33652551..33652720,33653136..33653310,33653420..33653604, FT 33653830..33654030,33654186..33654296,33654786..33654881, FT 33655003..33655104,33655255..33655341,33655834..33655944, FT 33656016..33656208,33656433..33656558,33657015..33657187, FT 33657811..33657975,33658694..33658886,33659392..33659496, FT 33659578..33659705,33660505..33660670,33661322..33661482, FT 33662701..33662862,33663489..33664351) FT /gene="ITPR3" FT /locus_tag="RP11-6B20.4-001" FT /product="inositol 1,4,5-triphosphate receptor, type 3" FT /note="match: ESTs: Em:AA190513 Em:AA232828 Em:AA233882 FT Em:AA236405 Em:AA534586 Em:AA554063 Em:AA604884 Em:AA713975 FT Em:AA723394 Em:AA731847 Em:AA748498 Em:AA811668 Em:AA828192 FT Em:AA857916 Em:AA865825 Em:AA968631 Em:AA970656 Em:AI074265 FT Em:AI318409 Em:AI375551 Em:AI446193 Em:AI523951 Em:AI688635 FT Em:AI812043 Em:AI816596 Em:AI817028 Em:AI863043 Em:AI874281 FT Em:AI983795 Em:AL040194 Em:AL556908 Em:AL597137 Em:AW003310 FT Em:AW058210 Em:AW084536 Em:AW167976 Em:AW192713 Em:AW248924 FT Em:AW295772 Em:AW300753 Em:AW301655 Em:AW338418 Em:AW444665 FT Em:AW504788 Em:AW665501 Em:AW779243 Em:AW950370 Em:BB864096 FT Em:BB865650 Em:BB865795 Em:BB865853 Em:BB865865 Em:BB865887 FT Em:BB865905 Em:BB866045 Em:BB866126 Em:BB866201 Em:BB866237 FT Em:BB866307 Em:BB866438 Em:BE253709 Em:BE410421 Em:BE467435 FT Em:BE563476 Em:BE646064 Em:BE674050 Em:BE674161 Em:BE675024 FT Em:BE685577 Em:BE697124 Em:BE720004 Em:BE868572 Em:BF000662 FT Em:BF001241 Em:BF056120 Em:BF057710 Em:BF109280 Em:BF437325 FT Em:BF510441 Em:BF690011 Em:BF756748 Em:BF817519 Em:BF849638 FT Em:BF850983 Em:BF851272 Em:BF877447 Em:BF915080 Em:BG057979 FT Em:BG149233 Em:BG231612 Em:BG242544 Em:BG249972 Em:BG334571 FT Em:BG334572 Em:BG396905 Em:BG756053 Em:BG756759 Em:BG763562 FT Em:BG952787 Em:BI006952 Em:BI457756 Em:BI652946 Em:BI655401 FT Em:BI663144 Em:BI691131 Em:BI856425 Em:BM145240 Em:BM150738 FT Em:BM151556 Em:BM193088 Em:BM288101 Em:D51848 Em:D51996 FT Em:R72168" FT /note="match: cDNAs: Em:AA161941 Em:AA191032 Em:AA236404 FT Em:AA335804 Em:AA501268 Em:AA554063 Em:AA701976 FT Em:AB012393.1 Em:AB012610.1 Em:AF157625.1 Em:AF329470.2 FT Em:AF402600.1 Em:AF402601.1 Em:AI150753 Em:AI173657 FT Em:AI287918 Em:AI318409 Em:AI375551 Em:AI688635 Em:AI812043 FT Em:AI863043 Em:AI892117 Em:AL121187 Em:AL555482 Em:AW003310 FT Em:AW058210 Em:AW073821 Em:AW177765 Em:AW190245 Em:AW248924 FT Em:AW249340 Em:AW300753 Em:AW361745 Em:AW753341 Em:AW849174 FT Em:AW911297 Em:AW993432 Em:BB612343 Em:BE079748 Em:BE252643 FT Em:BE255490 Em:BE304706 Em:BE370543 Em:BE380528 Em:BE386922 FT Em:BE396480 Em:BE397068 Em:BE534482 Em:BE548826 Em:BE572936 FT Em:BE573276 Em:BE614725 Em:BE615488 Em:BE646039 Em:BE672064 FT Em:BE675024 Em:BE727748 Em:BE798932 Em:BE799322 Em:BE814873 FT Em:BE869716 Em:BE875293 Em:BE890182 Em:BE916164 Em:BF026138 FT Em:BF026802 Em:BF183155 Em:BF219014 Em:BF582957 Em:BF799435 FT Em:BG034531 Em:BG175064 Em:BG231612 Em:BG253044 Em:BG326018 FT Em:BG385502 Em:BG422550 Em:BG425313 Em:BG468210 Em:BG468569 FT Em:BG475539 Em:BG661262 Em:BG821478 Em:BG824518 Em:BG939119 FT Em:BG960555 Em:BG961194 Em:BG979306 Em:BG987643 Em:BG993199 FT Em:BI003247 Em:BI077520 Em:BI115719 Em:BI160238 Em:BI649872 FT Em:BI655794 Em:BI657759 Em:BI665718 Em:BI685339 Em:BI825723 FT Em:BI850577 Em:BM020210 Em:BM146264 Em:BM152802 Em:BM153659 FT Em:BM464737 Em:D14400.1 Em:D26070.1 Em:D26350.1 Em:D26351.1 FT Em:E03036.1 Em:J05510.1 Em:L06096.1 Em:L38019.1 Em:R72206 FT Em:U01062.1 Em:U23850.1 Em:X15373.1" FT CDS join(33589380..33589468,33608261..33608331, FT 33623543..33623664,33625709..33625795,33626447..33626605, FT 33626798..33626896,33627243..33627326,33630305..33630451, FT 33630688..33630783,33631277..33631327,33631515..33631657, FT 33632647..33632746,33632830..33632990,33633612..33633753, FT 33634906..33635067,33635569..33635741,33636292..33636411, FT 33636751..33636933,33638102..33638353,33638448..33638592, FT 33638942..33639083,33639806..33640005,33641368..33641497, FT 33641985..33642042,33643468..33643633,33644545..33644709, FT 33644792..33644866,33645281..33645406,33646198..33646320, FT 33646416..33646616,33647659..33647910,33648106..33648231, FT 33648332..33648457,33650301..33650421,33650984..33651174, FT 33651797..33651945,33652134..33652242,33652375..33652465, FT 33652551..33652720,33653136..33653310,33653420..33653604, FT 33653830..33654030,33654186..33654296,33654786..33654881, FT 33655003..33655104,33655255..33655341,33655834..33655944, FT 33656016..33656208,33656433..33656558,33657015..33657187, FT 33657811..33657975,33658694..33658886,33659392..33659496, FT 33659578..33659705,33660505..33660670,33661322..33661482, FT 33662701..33662862,33663489..33663557) FT /gene="ITPR3" FT /locus_tag="RP11-6B20.4-001" FT /standard_name="OTTHUMP00000016213" FT /product="inositol 1,4,5-triphosphate receptor, type 3" FT /note="match: proteins: Sw:P11881 Sw:P29994 Sw:P29995 FT Sw:Q14571 Sw:Q14573 Sw:Q14573 Sw:Q14643 Sw:Q14643 Sw:Q63269 FT Tr:Q91908" FT /protein_id="CAI16455.1" FT /translation="MSEMSSFLHIGDIVSLYAEGSVNGFISTLGLVDDRCVVEPAAGDL FT DNPPKKFRDCLFKVCPMNRYSAQKQYWKAKQTKQDKEKIADVVLLQKLQHAAQMEQKQN FT DTENKKVHGDVVKYGSVIQLLHMKSNKYLTVNKRLPALLEKNAMRVTLDATGNEGSWLF FT IQPFWKLRSNGDNVVVGDKVILNPVNAGQPLHASNYELSDNAGCKEVNSVNCNTSWKIN FT LFMQFRDHLEEVLKGGDVVRLFHAEQEKFLTCDEYKGKLQVFLRTTLRQSATSATSSNA FT LWEVEVVHHDPCRGGAGHWNGLYRFKHLATGNYLAAEENPSYKGDASDPKAAGMGAQGR FT TGRRNAGEKIKYCLVAVPHGNDIASLFELDPTTLQKTDSFVPRNSYVRLRHLCTNTWIQ FT STNVPIDIEEERPIRLMLGTCPTKEDKEAFAIVSVPVSEIRDLDFANDASSMLASAVEK FT LNEGFISQNDRRFVIQLLEDLVFFVSDVPNNGQNVLDIMVTKPNRERQKLMREQNILKQ FT VFGILKAPFREKGGEGPLVRLEELSDQKNAPYQHMFRLCYRVLRHSQEDYRKNQEHIAK FT QFGMMQSQIGYDILAEDTITALLHNNRKLLEKHITKTEVETFVSLVRKNREPRFLDYLS FT DLCVSNHIAIPVTQELICKCVLDPKNSDILIRTELRPVKEMAQSHEYLSIEYSEEEVWL FT TWTDKNNEHHEKSVRQLAQEARAGNAHDENVLSYYRYQLKLFARMCLDRQYLAIDEISQ FT QLGVDLIFLCMADEMLPFDLRASFCHLMLHVHVDRDPQELVTPVKFARLWTEIPTAITI FT KDYDSNLNASRDDKKNKFANTMEFVEDYLNNVVSEAVPFANEEKNKLTFEVVSLAHNLI FT YFGFYSFSELLRLTRTLLGIIDCVQGPPAMLQAYEDPGGKNVRRSIQGVGHMMSTMVLS FT RKQSVFSAPSLSAGASAAEPLDRSKFEENEDIVVMETKLKILEILQFILNVRLDYRISY FT LLSVFKKEFVEVFPMQDSGADGTAPAFDSTTANMNLDRIGEQAEAMFGVGKTSSMLEVD FT DEGGRMFLRVLIHLTMHDYAPLVSGALQLLFKHFSQRQEAMHTFKQVQLLISAQDVENY FT KVIKSELDRLRTMVEKSELWVDKKGSGKGEEVEAGAAKDKKERPTDEEGFLHPPGEKSS FT ENYQIVKGILERLNKMCGVGEQMRKKQQRLLKNMDAHKVMLDLLQIPYDKGDAKMMEIL FT RYTHQFLQKFCAGNPGNQALLHKHLHLFLTPGLLEAETMQHIFLNNYQLCSEISEPVLQ FT HFVHLLATHGRHVQYLDFLHTVIKAEGKYVKKCQDMIMTELTNAGDDVVVFYNDKASLA FT HLLDMMKAARDGVEDHSPLMYHISLVDLLAACAEGKNVYTEIKCTSLLPLEDVVSVVTH FT EDCITEVKMAYVNFVNHCYVDTEVEMKEIYTSNHIWTLFENFTLDMARVCSKREKRVAD FT PTLEKYVLSVVLDTINAFFSSPFSENSTSLQTHQTIVVQLLQSTTRLLECPWLQQQHKG FT SVEACIRTLAMVAKGRAILLPMDLDAHISSMLSSGASCAAAAQRNASSYKATTRAFPRV FT TPTANQWDYKNIIEKLQDIITALEERLKPLVQAELSVLVDVLHWPELLFLEGSEAYQRC FT ESGGFLSKLIQHTKDLMESEEKLCIKVLRTLQQMLLKKTKYGDRGNQLRKMLLQNYLQN FT RKSTSRGDLPDPIGTGLDPDWSAIAATQCRLDKEGATKLVCDLITSTKNEKIFQESIGL FT AIHLLDGGNTEIQKSFHNLMMSDKKSERFFKVLHDRMKRAQQETKSTVAVNMNDLGSQP FT HEDREPVDPTTKGRVASFSIPGSSSRYSLGPSLRRGHEVSERVQSSEMGTSVLIMQPIL FT RFLQLLCENHNRDLQNFLRCQNNKTNYNLVCETLQFLDIMCGSTTGGLGLLGLYINEDN FT VGLVIQTLETLTEYCQGPCHENQTCIVTHESNGIDIITALILNDISPLCKYRMDLVLQL FT KDNASKLLLALMESRHDSENAERILISLRPQELVDVIKKAYLQEEERENSEVSPREVGH FT NIYILALQLSRHNKQLQHLLKPVKRIQEEEAEGISSMLSLNNKQLSQMLKSSAPAQEEE FT EDPLAYYENHTSQIEIVRQDRSMEQIVFPVPGICQFLTEETKHRLFTTTEQDEQGSKVS FT DFFDQSSFLHNEMEWQRKLRSMPLIYWFSRRMTLWGSISFNLAVFINIIIAFFYPYMEG FT ASTGVLDSPLISLLFWILICFSIAALFTKRYSIRPLIVALILRSIYYLGIGPTLNILGA FT LNLTNKIVFVVSFVGNRGTFIRGYKAMVMDMEFLYHVGYILTSVLGLFAHELFYSILLF FT DLIYREETLFNVIKSVTRNGRSILLTALLALILVYLFSIVGFLFLKDDFILEVDRLPNN FT HSTASPLGMPHGAAAFVDTCSGDKMDCVSGLSVPEVLEEDRELDSTERACDTLLMCIVT FT VMNHGLRNGGGVGDILRKPSKDESLFPARVVYDLLFFFIVIIIVLNLIFGVIIDTFADL FT RSEKQKKEEILKTTCFICGLERDKFDNKTVSFEEHIKLEHNMWNYLYFIVLVRVKNKTD FT YTGPESYVAQMIKNKNLDWFPRMRAMSLVSNEGEGEQNEIRILQDKLNSTMKLVSHLTA FT QLNELKEQMTEQRKRRQRLGFVDVQNCISR" FT misc_feature 33601416..33601539 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 33653657 FT /note="Clone_left_end: RP3-482C21" FT polyA_signal 33664320..33664325 FT polyA_site 33664339 FT polyA_site 33664351 FT polyA_site complement(33665345) FT polyA_signal complement(33665366..33665371) FT mRNA complement(join(33665345..33665527,33668221..33668290, FT 33669123..33669197,33679326..33679504)) FT /locus_tag="RP11-6B20.2-001" FT /note="match: ESTs: Em:AA033149 Em:AA052663 Em:AA056029 FT Em:AA090265 Em:AA142858 Em:AA163482 Em:AA230683 Em:AA238366 FT Em:AA245946 Em:AA254706 Em:AA270705 Em:AA304316 Em:AA314199 FT Em:AA372713 Em:AA372977 Em:AA448666 Em:AA448763 Em:AA452900 FT Em:AA469104 Em:AA575663 Em:AA615853 Em:AA630401 Em:AA708925 FT Em:AA728846 Em:AA868287 Em:AA891134 Em:AA933045 Em:AA975000 FT Em:AI015250 Em:AI155321 Em:AI241216 Em:AI430253 Em:AI500207 FT Em:AI563924 Em:AI583241 Em:AI734878 Em:AI788365 Em:AI790199 FT Em:AI871374 Em:AL035034 Em:AL117767 Em:AV040505 Em:AV045779 FT Em:AV051082 Em:AV108956 Em:AV154088 Em:AV204651 Em:AV204952 FT Em:AV205458 Em:AV215015 Em:AV738023 Em:AV743202 Em:AV743451 FT Em:AV743920 Em:AW007218 Em:AW051788 Em:AW148299 Em:AW554892 FT Em:AW918775 Em:AW963655 Em:BE100657 Em:BE196806 Em:BE623901 FT Em:BE812155 Em:BE812410 Em:BE812413 Em:BE907725 Em:BE908540 FT Em:BE936758 Em:BE940199 Em:BE940209 Em:BF011871 Em:BF016715 FT Em:BF129970 Em:BF148736 Em:BF219051 Em:BF339173 Em:BF406723 FT Em:BF407759 Em:BF458251 Em:BF580473 Em:BF607934 Em:BF700172 FT Em:BG087670 Em:BG181737 Em:BG211808 Em:BG212328 Em:BG219192 FT Em:BG219193 Em:BG461182 Em:BG461356 Em:BG760132 Em:BG768926 FT Em:BG898560 Em:BG943847 Em:BI134837 Em:BI294200 Em:BI340687 FT Em:BI342447 Em:BI440458 Em:BI522811 Em:BI538791 Em:BI604191 FT Em:BI684576 Em:BI916063 Em:BM450320 Em:F22165 Em:F27183 FT Em:F32178 Em:F33453 Em:F36633 Em:H60157 Em:W11030 Em:W12849 FT Em:W34523 Em:W48129 Em:W57916 Em:W57917 Em:W78582" FT CDS complement(join(33665430..33665527,33668221..33668290, FT 33669123..33669197,33679326..33679463)) FT /locus_tag="RP11-6B20.2-001" FT /standard_name="OTTHUMP00000016216" FT /protein_id="CAI16458.1" FT /translation="MAASRYRRFLKLCEEWPVDETKRGRDLGAYLRQRVAQAFREGENT FT QVAEPEACDQMYESLARLHSNYYKHKYPRPRDTSFSGLSLEEYKLILSTDTLEELKEID FT KGMWKKLQEKFAPKGPEEDHKA" FT mRNA complement(join(33665345..33665527,33668221..33668290, FT 33679326..33679504)) FT /locus_tag="RP11-6B20.2-002" FT /note="match: ESTs: Em:BE935038 Em:BF208421 Em:F23448 FT Em:W33996" FT CDS complement(join(33665430..33665527,33668221..33668290, FT 33679326..33679463)) FT /locus_tag="RP11-6B20.2-002" FT /standard_name="OTTHUMP00000016217" FT /protein_id="CAI16457.1" FT /translation="MAASRYRRFLKLCEEWPVDETKRGRDLGAYLRQRVAQAFREGENT FT QYPRPRDTSFSGLSLEEYKLILSTDTLEELKEIDKGMWKKLQEKFAPKGPEEDHKA" FT polyA_site complement(33689447) FT polyA_signal complement(33689471..33689476) FT CDS complement(join(33690497..33690964,33693218..33693393, FT 33694508..33694683,33695864..33696077,33703055..33703253)) FT /gene="IHPK3" FT /locus_tag="RP11-6B20.3-002" FT /standard_name="OTTHUMP00000016212" FT /product="inositol hexaphosphate kinase 3" FT /note="match: proteins: Sw:Q6PD10 Sw:Q92551 Sw:Q9R0U1 FT Tr:O74561 Tr:Q9W2E9" FT /protein_id="CAI16459.1" FT /translation="MVVQNSADAGDMRAGVQLEPFLHQVGGHMSVMKYDEHTVCKPLVS FT REQRFYESLPLAMKRFTPQYKGTVTVHLWKDSTGHLSLVANPVKESQEPFKVSTESAAV FT AIWQTLQQTTGSNGSDCTLAQWPHAQLARSPKESPAKALLRSEPHLNTPAFSLVEDTNG FT NQVERKSFNPWGLQCHQAHLTRLCSEYPENKRHRFLLLENVVSQYTHPCVLDLKMGTRQ FT HGDDASEEKKARHMRKCAQSTSACLGVRICGMQVYQTDKKYFLCKDKYYGRKLSVEGFR FT QALYQFLHNGSHLRRELLEPILHQLRALLSVIRSQSSYRFYSSSLLVIYDGQEPPERAP FT GSPHPHEAPQAAHGSSPGGLTKVDIRMIDFAHTTYKGYWNEHTTYDGPDPGYIFGLENL FT IRILQDIQEGE" FT mRNA complement(join(33689447..33690964,33693218..33693393, FT 33694508..33694683,33695864..33696077,33703055..33703432, FT 33714535..33714682)) FT /gene="IHPK3" FT /locus_tag="RP11-6B20.3-002" FT /product="inositol hexaphosphate kinase 3" FT /note="match: ESTs: Em:AA732430 Em:BI756662 Em:H48857" FT /note="match: cDNAs: Em:AF393812.1 Em:AK056586.1" FT misc_feature 33716500 FT /note="Clone_right_end: RP11-6B20" FT misc_feature 33716601..33768381 FT /note="annotated region of clone" FT CDS complement(join(33762602..33762612,33763280..33763382, FT 33766882..33766998,AL138889.9:543..659)) FT /gene="MLN" FT /locus_tag="RP3-482C21.1-001" FT /standard_name="OTTHUMP00000016220" FT /product="motilin" FT /note="match: proteins: Sw:O18811.1 Sw:O18845.1 Sw:O62820.1 FT Sw:P12872.1 Tr:Q2M1L2.1" FT /protein_id="CAI21526.2" FT /translation="MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNK FT GQKKSLSVWQRSGEEGPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGL FT LSEMLPQHAAK" FT mRNA complement(join(33762461..33762612,33763280..33763382, FT 33766882..33766998,AL138889.9:543..666, FT AL138889.9:3449..3507)) FT /gene="MLN" FT /locus_tag="RP3-482C21.1-001" FT /product="motilin" FT /note="match: ESTs: Em:AW014210.1" FT /note="match: cDNAs: Em:AF016372.1 Em:BC069675.1 FT Em:Y00695.1" FT polyA_site complement(33738990) FT polyA_signal complement(33739008..33739013) FT mRNA complement(join(33738991..33740555,33744731..33744833, FT 33744915..33745016,33746019..33746164,33747877..33747956, FT 33748854..33748930,33752129..33752204,33754511..33754551, FT 33756158..33756912)) FT /gene="LEMD2" FT /locus_tag="RP3-482C21.2-001" FT /product="LEM domain containing 2" FT /note="match: ESTs: Em:BM669207.1 Em:CB242417.1" FT /note="match: cDNAs: Em:AK074959.1 Em:BC039864.1 FT Em:BC051803.1" FT CDS complement(join(33740405..33740555,33744731..33744833, FT 33744915..33745016,33746019..33746164,33747877..33747956, FT 33748854..33748930,33752129..33752204,33754511..33754551, FT 33756158..33756893)) FT /gene="LEMD2" FT /locus_tag="RP3-482C21.2-001" FT /standard_name="OTTHUMP00000016218" FT /product="LEM domain containing 2" FT /note="match: proteins: Sw:Q8NC56.1" FT /protein_id="CAI21527.2" FT /translation="MAGLSDLELRRELQALGFQPGPITDTTRDVYRNKLRRLRGEARLR FT DEERLREEARPRGEERLREEARLREDAPLRARPAAASPRAEPWLSQPASGSAYATPGAY FT GDIRPSAASWVGSRGLAYPARPAQLRRRASVRGSSEEDEDARTPDRATQGPGLAARRWW FT AASPAPARLPSSLLGPDPRPGLRATRAGPAGAARARPEVGRRLERWLSRLLLWASLGLL FT LVFLGILWVKMGKPSAPQEAEDNMKLLPVDCERKTDEFCQAKQKAALLELLHELYNFLA FT IQAGNFECGNPENLKSKCIPVMEAQEYIANVTSSSSAKFEAALTWILSSNKDVGIWLKG FT EDQSELVTTVDKVVCLESAHPRMGVGCRLSRALLTAVTNVLIFFWCLAFLWGLLILLKY FT RWRKLEEEEQAMYEMVKKIIDVVQDHYVDWEQDMERYPYVGILHVRDSLIPPQSRRRMK FT RVWDRAVEFLASNESRIQTESHRVAGEDMLVWRWTKPSSFSDSER" FT mRNA complement(join(<33744915..33745016,33746019..33746164, FT 33747877..33747956,33748854..33748930,33756158..>33756603)) FT /gene="LEMD2" FT /locus_tag="RP3-482C21.2-002" FT /product="LEM domain containing 2" FT /note="match: ESTs: Em:BG717004" FT CDS complement(join(<33744915..33745016,33746019..33746164, FT 33747877..33747956,33748854..33748930,33756158..>33756603)) FT /codon_start=2 FT /gene="LEMD2" FT /locus_tag="RP3-482C21.2-002" FT /standard_name="OTTHUMP00000016219" FT /product="LEM domain containing 2" FT /protein_id="CAI21529.1" FT /translation="YATPGAYGDIRPSAASWVGSRGLAYPARPAQLRRRASVRGSSEED FT EDARTPDRATQGPGLAARRWWAASPAPARLPSSLLGPDPRPGLRATRAGPAGAARARPE FT VGRRLERWLSRLLLWASLGLLLVFLGILWVKMGKPSAPQEAEDNSNFECGNPENLKSKC FT IPVMEAQEYIANVTSSSSAKFEAALTWILSSNKDVGIWLKGEDQSELVTTVDKVVCLES FT AHPRMGVGCRLSRALLTAVTNVLIFFWCLAFLWGLLILLKYRWRKLEEEEQAMYEMVKK FT II" FT polyA_site complement(33762446) FT polyA_signal complement(33762464..33762469) FT misc_feature 33768182 FT /note="Clone_left_end: RP3-468B3" FT misc_feature 33768382..33905167 FT /note="annotated region of clone" FT CDS complement(join(AL158049.11:46102..46112, FT AL158049.11:46780..46882,AL158049.11:50382..50498, FT 33768824..33768940)) FT /gene="MLN" FT /locus_tag="RP3-482C21.1-001" FT /standard_name="OTTHUMP00000016220" FT /product="motilin" FT /note="match: proteins: Sw:O18811.1 Sw:O18845.1 Sw:O62820.1 FT Sw:P12872.1 Tr:Q2M1L2.1" FT /protein_id="CAI21441.2" FT /translation="MVSRKAVAALLVVHVAAMLASQTEAFVPIFTYGELQRMQEKERNK FT GQKKSLSVWQRSGEEGPVDPAEPIREEENEMIKLTAPLEIGMRMNSRQLEKYPATLEGL FT LSEMLPQHAAK" FT mRNA complement(join(AL158049.11:45961..46112, FT AL158049.11:46780..46882,AL158049.11:50382..50498, FT 33768824..33768947,33771730..33771788)) FT /gene="MLN" FT /locus_tag="RP3-482C21.1-001" FT /product="motilin" FT /note="match: cDNAs: Em:AF016372.1 Em:BC069675.1 FT Em:Y00695.1" FT /note="match: ESTs: Em:AW014210.1" FT misc_feature 33778896 FT /note="Clone_right_end: RP3-482C21" FT misc_feature 33803031..33803059 FT /note="Single clone region. Assembly confirmed by FT restriction digests" FT misc_feature 33803189..33803240 FT /note="Single clone region. Sequence derived from PCR FT product only" FT mRNA join(33881861..33881988,33888703..33888791, FT 33892111..33892460) FT /locus_tag="RP3-468B3.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG717283" FT misc_feature 33905067 FT /note="Clone_right_end: RP3-468B3" FT misc_feature 33985567 FT /note="Clone_right_end: RP13-377P8" FT misc_feature 33985668..34102438 FT /note="annotated region of clone" FT polyA_site complement(33989628) FT polyA_signal complement(33989642..33989647) FT misc_feature 34009720..34009888 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 34033206..34033218 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 34039043 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 960bp by restriction digest data" FT misc_feature 34098439 FT /note="Clone_left_end: RP11-513I15" FT mRNA complement(join(33989628..33990647,33995897..33996143, FT 34003445..34004380,34007955..34008091,34008325..34008525, FT 34024321..34024461,34026751..34026905,34029670..34029805, FT 34059660..34059876,34100755..34101443)) FT /gene="GRM4" FT /locus_tag="RP13-459B11.1-001" FT /product="glutamate receptor, metabotropic 4" FT /note="match: ESTs: Em:AA297070 Em:AA297088 Em:AA416557 FT Em:AA583221 Em:AW247497 Em:BE207131 Em:BF887878 Em:BG609579 FT Em:T09090" FT /note="match: cDNAs: Em:M90518.1 Em:M92077.1 Em:U47331.1 FT Em:U92457.1" FT CDS complement(join(33990598..33990647,33995897..33996143, FT 34003445..34004380,34007955..34008091,34008325..34008525, FT 34024321..34024461,34026751..34026905,34029670..34029805, FT 34059660..34059876,34100755..34101273)) FT /gene="GRM4" FT /locus_tag="RP13-459B11.1-001" FT /standard_name="OTTHUMP00000016221" FT /product="glutamate receptor, metabotropic 4" FT /note="match: proteins: Sw:P31423 Sw:Q14833 Tr:Q62916" FT /protein_id="CAI17348.1" FT /translation="MPGKRGLGWWWARLPLCLLLSLYGPWMPSSLGKPKGHPHMNSIRI FT DGDITLGGLFPVHGRGSEGKPCGELKKEKGIHRLEAMLFALDRINNDPDLLPNITLGAR FT ILDTCSRDTHALEQSLTFVQALIEKDGTEVRCGSGGPPIITKPERVVGVIGASGSSVSI FT MVANILRLFKIPQISYASTAPDLSDNSRYDFFSRVVPSDTYQAQAMVDIVRALKWNYVS FT TVASEGSYGESGVEAFIQKSREDGGVCIAQSVKIPREPKAGEFDKIIRRLLETSNARAV FT IIFANEDDIRRVLEAARRANQTGHFFWMGSDSWGSKIAPVLHLEEVAEGAVTILPKRMS FT VRGFDRYFSSRTLDNNRRNIWFAEFWEDNFHCKLSRHALKKGSHVKKCTNRERIGQDSA FT YEQEGKVQFVIDAVYAMGHALHAMHRDLCPGRVGLCPRMDPVDGTQLLKYIRNVNFSGI FT AGNPVTFNENGDAPGRYDIYQYQLRNDSAEYKVIGSWTDHLHLRIERMHWPGSGQQLPR FT SICSLPCQPGERKKTVKGMPCCWHCEPCTGYQYQVDRYTCKTCPYDMRPTENRTGCRPI FT PIIKLEWGSPWAVLPLFLAVVGIAATLFVVITFVRYNDTPIVKASGRELSYVLLAGIFL FT CYATTFLMIAEPDLGTCSLRRIFLGLGMSISYAALLTKTNRIYRIFEQGKRSVSAPRFI FT SPASQLAITFSLISLQLLGICVWFVVDPSHSVVDFQDQRTLDPRFARGVLKCDISDLSL FT ICLLGYSMLLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIVWLAFIPIFFGTSQSA FT DKLYIQTTTLTVSVSLSASVSLGMLYMPKVYIILFHPEQNVPKRKRSLKAVVTAATMSN FT KFTQKGNFRPNGEAKSELCENLEAPALATKQTYVTYTNHAI" FT misc_feature 34102439..34252266 FT /note="annotated region of clone" FT misc_feature 34121362 FT /note="Clone_right_end: RP13-459B11" FT misc_feature 34186869..34186884 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS join(34187216..34187482,34187800..34187843) FT /pseudo FT /locus_tag="RP11-513I15.3-001" FT /product="cytochrome c, somatic (CYCS) pseudogene" FT /note="match: proteins: Sw:P00007 Sw:P00008 Sw:P00011 FT Sw:P00070 Sw:P00077 Sw:P15451 Sw:P62896 Sw:P68096 Sw:P99998 FT Tr:O96573 Tr:Q9ZSL2" FT mRNA join(34204650..34204740,34208514..34208659, FT 34210489..34210572,34211245..34211295,34212608..34214008) FT /gene="HMGA1" FT /locus_tag="RP11-513I15.2-001" FT /product="high mobility group AT-hook 1" FT /note="match: ESTs: Em:AU076481 Em:AU122578 Em:AU124619 FT Em:AU124770 Em:AU124986 Em:AU125127 Em:AU125431 Em:AU125673 FT Em:AU128038 Em:AU131305 Em:AU133838 Em:AU139288 Em:BE243841 FT Em:BE244431 Em:BE513637 Em:BG330266 Em:BG331323 Em:BG489707 FT Em:BI224704" FT /note="match: cDNAs: Em:AK010617.1 Em:BC008125.1 FT Em:BC008963.1 Em:BC013455.1 Em:M23617.1" FT mRNA join(34204650..34204740,34205393..34205567, FT 34208514..34208659,34210489..34210572,34211245..34211295, FT 34212608..34214008) FT /gene="HMGA1" FT /locus_tag="RP11-513I15.2-002" FT /product="high mobility group AT-hook 1" FT /note="match: ESTs: Em:AU076481 Em:AU099375 Em:AU122578 FT Em:AU124619 Em:AU124770 Em:AU124986 Em:AU125127 Em:AU125431 FT Em:AU125673 Em:AU125787 Em:AU128038 Em:AU129165 Em:AU131305 FT Em:AU133838 Em:AU139288 Em:BE243841 Em:BE244431 Em:BE269062 FT Em:BE281283 Em:BE410484 Em:BE513637 Em:BE560784 Em:BE903462 FT Em:BG330266 Em:BG330904 Em:BG331323 Em:BG335160 Em:BG386013 FT Em:BG394630 Em:BG396618 Em:BG475235 Em:BG489155 Em:BG489707 FT Em:BG746602 Em:BG751843 Em:BG752527 Em:BG827986 Em:BI114389 FT Em:BI116864 Em:BI224704 Em:BI226550 Em:BI226938 FT Em:BM049788" FT /note="match: cDNAs: Em:BC004924.1 Em:M23616.1 Em:X14958.1" FT mRNA join(34204650..34204740,34205393..34205567, FT 34208514..34208692,34210489..34210572,34211245..34211295, FT 34212608..34214008) FT /gene="HMGA1" FT /locus_tag="RP11-513I15.2-004" FT /product="high mobility group AT-hook 1" FT /note="match: cDNAs: Em:BC005833.1 Em:BC008832.1" FT mRNA join(34204981..34205094,34208514..34208659, FT 34210489..34210572,34211245..34211295,34212608..34212928) FT /gene="HMGA1" FT /locus_tag="RP11-513I15.2-003" FT /product="high mobility group AT-hook 1" FT /note="match: ESTs: Em:BM927606" FT CDS join(34208558..34208659,34210489..34210572, FT 34211245..34211295,34212608..34212661) FT /gene="HMGA1" FT /locus_tag="RP11-513I15.2-001" FT /standard_name="OTTHUMP00000016222" FT /product="high mobility group AT-hook 1" FT /note="match: proteins: Sw:P17096 Sw:Q9QXP3" FT /protein_id="CAI14992.1" FT /translation="MSESSSKSSQPLASKQEKDGTEKRGRGRPRKQPPKEPSEVPTPKR FT PRGRPKGSKNKGAAKTRKTTTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ" FT CDS join(34208558..34208692,34210489..34210572, FT 34211245..34211295,34212608..34212661) FT /gene="HMGA1" FT /locus_tag="RP11-513I15.2-004" FT /standard_name="OTTHUMP00000016224" FT /product="high mobility group AT-hook 1" FT /protein_id="CAI14991.1" FT /translation="MSESSSKSSQPLASKQEKDGTEKRGRGRPRKQPPVSPGTALVGSQ FT KEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTPGRKPRGRPKKLEKEEEEGISQESSE FT EEQ" FT misc_feature 34217831..34217834 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS complement(34231088..34231450) FT /pseudo FT /locus_tag="RP11-513I15.5-001" FT /product="ribosomal protein L35 (RPL35) pseudogene" FT /note="match: proteins: Sw:O80626 Sw:P17078 Sw:P39741 FT Sw:P42766 Sw:Q29361 Sw:Q9LZ41 Sw:Q9SF53 Tr:Q9W499" FT misc_feature 34236807..34236899 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA 34247482..34252266 FT /locus_tag="RP11-513I15.6-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AF034176.1" FT misc_feature 34248267 FT /note="Clone_left_end: RP1-187N21" FT misc_feature 34252267..34353412 FT /note="annotated region of clone" FT mRNA 34252267..34254545 FT /locus_tag="RP1-187N21.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AF034176.1" FT polyA_site complement(34255997) FT polyA_signal complement(34256012..34256017) FT mRNA complement(join(34255997..34256708,34261228..34261312, FT 34263418..34263462,34309639..34309749, FT AL355855.23:6892..7302)) FT /gene="NUDT3" FT /locus_tag="RP1-187N21.3-001" FT /product="nudix (nucleoside diphosphate linked moiety FT X)-type motif 3" FT /note="match: ESTs: Em:AA047824 Em:AA284655 Em:AA479820 FT Em:AA589442 Em:AA985740 Em:AI338632 Em:AI743587 Em:AI767342 FT Em:AI806605 Em:AI923211 Em:AV593762 Em:AW028284 Em:AW073161 FT Em:AW320902 Em:AW511124 Em:AW573076 Em:AW665402 Em:AW674595 FT Em:AW764047 Em:BB859317 Em:BE044238 Em:BE674245 Em:BE674712 FT Em:BE796938 Em:BE858825 Em:BF017791 Em:BF114743 Em:BF115981 FT Em:BF119551 Em:BF223528 Em:BF590694 Em:BF685616 Em:BF967294 FT Em:BG706163 Em:BG706541 Em:BG709416 Em:BG714472 Em:BG743935 FT Em:BG748989 Em:BG777952 Em:BG861461 Em:BI080596 Em:BI196454 FT Em:BI196979 Em:BI219308 Em:BI402774 Em:BI545032 Em:BI596774 FT Em:BI600405 Em:BI667873 Em:BI682251 Em:BI913450 Em:BM288245 FT Em:BM362701 Em:BM458243 Em:BM541810" FT /note="match: cDNAs: Em:AA029904 Em:AF062529.1 FT Em:AF062530.1 Em:AF067803.1 Em:AF191649.1 Em:AF191650.1 FT Em:AF191651.1 Em:AF191652.2 Em:AF191653.1 Em:AF264064.1 FT Em:AF311215.1 Em:AF311216.1 Em:AI092577 Em:AI184633 FT Em:AI359701 Em:AI368462 Em:AI379220 Em:AI418448 Em:AI425059 FT Em:AI498623 Em:AI507118 Em:AI523894 Em:AI743587 Em:AI835232 FT Em:AK001490.1 Em:AK017075.1 Em:AW028284 Em:AW046139 FT Em:AW073161 Em:AW237770 Em:AW511124 Em:AW593328 Em:AW612099 FT Em:AW612243 Em:AW665402 Em:AW674506 Em:BC007727.1 FT Em:BC009942.1 Em:BC012069.1 Em:BC016534.1 Em:BE044238 FT Em:BE348402 Em:BE549561 Em:BE670327 Em:BE674245 Em:BE674712 FT Em:BE676570 Em:BE858073 Em:BE858825 Em:BF114743 Em:BF115981 FT Em:BF223528 Em:BF447851 Em:BF475448 Em:BF590694 Em:BF732762 FT Em:BI398791 Em:BM083912 Em:BM272198 Em:N75398" FT CDS complement(join(34256530..34256708,34261228..34261312, FT 34263418..34263462,34309639..34309749, FT AL355855.23:6892..6990)) FT /gene="NUDT3" FT /locus_tag="RP1-187N21.3-001" FT /standard_name="OTTHUMP00000016227" FT /product="nudix (nucleoside diphosphate linked moiety FT X)-type motif 3" FT /note="match: proteins: Sw:O95989 Sw:P0C028 Sw:Q8R2U6 FT Sw:Q96G61 Sw:Q96G61 Sw:Q99MY2 Sw:Q9JI46 Sw:Q9NZJ9 Sw:Q9NZJ9 FT Sw:Q9NZJ9 Tr:Q9VTC9" FT /protein_id="CAI19715.1" FT /translation="MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDR FT WIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVL FT EDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVS FT AQSSMSGIR" FT misc_feature 34353413..34382591 FT /note="annotated region of clone" FT mRNA complement(join(Z98036.1:5731..6442,Z98036.1:10962..11046, FT Z98036.1:13152..13196,Z98036.1:59373..59483, FT 34360041..34360451)) FT /gene="NUDT3" FT /locus_tag="RP1-187N21.3-001" FT /product="nudix (nucleoside diphosphate linked moiety FT X)-type motif 3" FT /note="match: ESTs: Em:AA047824 Em:AA284655 Em:AA479820 FT Em:AA589442 Em:AA985740 Em:AI338632 Em:AI743587 Em:AI767342 FT Em:AI806605 Em:AI923211 Em:AV593762 Em:AW028284 Em:AW073161 FT Em:AW320902 Em:AW511124 Em:AW573076 Em:AW665402 Em:AW674595 FT Em:AW764047 Em:BB859317 Em:BE044238 Em:BE674245 Em:BE674712 FT Em:BE796938 Em:BE858825 Em:BF017791 Em:BF114743 Em:BF115981 FT Em:BF119551 Em:BF223528 Em:BF590694 Em:BF685616 Em:BF967294 FT Em:BG706163 Em:BG706541 Em:BG709416 Em:BG714472 Em:BG743935 FT Em:BG748989 Em:BG777952 Em:BG861461 Em:BI080596 Em:BI196454 FT Em:BI196979 Em:BI219308 Em:BI402774 Em:BI545032 Em:BI596774 FT Em:BI600405 Em:BI667873 Em:BI682251 Em:BI913450 Em:BM288245 FT Em:BM362701 Em:BM458243 Em:BM541810" FT /note="match: cDNAs: Em:AA029904 Em:AF062529.1 FT Em:AF062530.1 Em:AF067803.1 Em:AF191649.1 Em:AF191650.1 FT Em:AF191651.1 Em:AF191652.2 Em:AF191653.1 Em:AF264064.1 FT Em:AF311215.1 Em:AF311216.1 Em:AI092577 Em:AI184633 FT Em:AI359701 Em:AI368462 Em:AI379220 Em:AI418448 Em:AI425059 FT Em:AI498623 Em:AI507118 Em:AI523894 Em:AI743587 Em:AI835232 FT Em:AK001490.1 Em:AK017075.1 Em:AW028284 Em:AW046139 FT Em:AW073161 Em:AW237770 Em:AW511124 Em:AW593328 Em:AW612099 FT Em:AW612243 Em:AW665402 Em:AW674506 Em:BC007727.1 FT Em:BC009942.1 Em:BC012069.1 Em:BC016534.1 Em:BE044238 FT Em:BE348402 Em:BE549561 Em:BE670327 Em:BE674245 Em:BE674712 FT Em:BE676570 Em:BE858073 Em:BE858825 Em:BF114743 Em:BF115981 FT Em:BF223528 Em:BF447851 Em:BF475448 Em:BF590694 Em:BF732762 FT Em:BI398791 Em:BM083912 Em:BM272198 Em:N75398" FT CDS complement(join(Z98036.1:6264..6442,Z98036.1:10962..11046, FT Z98036.1:13152..13196,Z98036.1:59373..59483, FT 34360041..34360139)) FT /gene="NUDT3" FT /locus_tag="RP1-187N21.3-001" FT /standard_name="OTTHUMP00000016227" FT /product="nudix (nucleoside diphosphate linked moiety FT X)-type motif 3" FT /note="match: proteins: Sw:O95989 Sw:P0C028 Sw:Q8R2U6 FT Sw:Q96G61 Sw:Q96G61 Sw:Q99MY2 Sw:Q9JI46 Sw:Q9NZJ9 Sw:Q9NZJ9 FT Sw:Q9NZJ9 Tr:Q9VTC9" FT /protein_id="CAH72222.1" FT /translation="MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDR FT WIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVL FT EDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVS FT AQSSMSGIR" FT misc_feature 34365702 FT /note="Forced join. Gap size estimated to be approximately FT 200bp by restriction digest data" FT misc_feature 34368362..34368461 FT /note="Sequence from uni-directional dGTP reads only" FT misc_feature 34382229 FT /note="Clone_left_end: RP11-375E1" FT misc_feature 34382592..34507015 FT /note="annotated region of clone" FT polyA_site complement(34385231) FT polyA_signal complement(34385252..34385257) FT CDS complement(join(34506051..34506229,BX255971.1:112..258, FT BX255971.1:377..401,BX255973.1:115..137, FT BX255973.1:1559..1756,BX255973.1:4595..5030)) FT /gene="RP11-375E1__A.3" FT /locus_tag="RP11-375E1__A.3-001" FT /standard_name="OTTHUMP00000016234" FT /product="prostrate epithelium specific Ets transcription FT factor (PDEF) (PSE)" FT /note="match: proteins: Sw:O95238 Sw:Q9WTP3" FT /protein_id="CAH73099.1" FT /translation="MGSASPGLSSVSPSHLLLPPDTVSRTGLEKAAAGAVGLERRDWSP FT SPPATPEQGLSAFYLSYFDMLYPEDSSWAAKAPGASSREEPPEEPEQCPVIDSQAPAGS FT LDLVPGGLTLEEHSLEQVQSMVVGEVLKDIETACKLLNITADPMDWSPSNVQKWLLWTE FT HQYRLPPMGKAFQELAGKELCAMSEEQFRQRSPLGGDVLHAHLDIWKSAAWMKERTSPG FT AIHYCASTSEESWTDSEVDSSCSGQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKI FT EDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKKGIIRKPDISQRLVYQFVHPI" FT CDS complement(join(34385283..34385324,34386146..34386201, FT 34389507..34389584,34392446..34392617,34392849..34392998)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-001" FT /standard_name="OTTHUMP00000016229" FT /product="ribosomal protein S10" FT /note="match: proteins: Sw:P46783 Sw:P63326 Sw:Q07254 FT Tr:Q9NQ39" FT /protein_id="CAH73100.1" FT /translation="MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHV FT MKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRP FT RPKGLEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGAGSATEFQFRGGFGRGRGQP FT PQ" FT mRNA complement(join(34385231..34385324,34385575..34385674, FT 34386146..34386201,34389507..34389584,34392446..34392617, FT 34392849..34392998)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-005" FT /product="ribosomal protein S10" FT /note="match: ESTs: Em:BF036105.1 Em:BG940990.1 FT Em:BQ928917.1" FT CDS complement(join(34385612..34385674,34386146..34386201, FT 34389507..34389584,34392446..34392617,34392849..34392998)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-005" FT /standard_name="OTTHUMP00000016230" FT /product="ribosomal protein S10" FT /protein_id="CAH73101.1" FT /translation="MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHV FT MKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRP FT RPKGLEGERPARLTRGEADRDTYRRSAVPPGADKKAEAGAGSATEFQFVLIAHDCSQIM FT SFVKRKHVQ" FT mRNA complement(join(34385231..34385324,34386146..34386201, FT 34389507..34389584,34392446..34392617,34392849..34392998, FT 34393293..34393357)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-004" FT /product="ribosomal protein S10" FT /note="match: ESTs: Em:BG773303" FT mRNA complement(join(34385231..34385324,34386146..34386201, FT 34389507..34389584,34392446..34392617,34392849..34392998, FT 34393335..34393561)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-003" FT /product="ribosomal protein S10" FT /note="match: ESTs: Em:BF663295 Em:BG755652 Em:BG756952" FT mRNA complement(join(34385231..34385324,34386146..34386201, FT 34389507..34389584,34392446..34392617,34392849..34392998, FT 34393573..34393803)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-002" FT /product="ribosomal protein S10" FT /note="match: ESTs: Em:BE276791 Em:BE302825 Em:BE385833 FT Em:BF686649 Em:BF686785 Em:BF967143 Em:BG255603 Em:BG255710 FT Em:BG280866 Em:BG476338 Em:BG532491 Em:BI602786 Em:BM011401 FT Em:BM018562" FT /note="match: cDNAs: Em:AK025353.1" FT mRNA complement(join(34385231..34385324,34386146..34386201, FT 34389507..34389584,34392446..34392617,34392849..34392998, FT 34393809..34393902)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-001" FT /product="ribosomal protein S10" FT /note="match: ESTs: Em:AA665269 Em:AI795821 Em:AU099810 FT Em:AW867812 Em:BF176156 Em:BF699766 Em:BF814380 Em:BF975074 FT Em:BF976124 Em:BG028896 Em:BG113498 Em:BG332855 Em:BG496483 FT Em:BG749004 Em:BG940847 Em:BG941060 Em:BG941319 Em:BI549182 FT Em:BI602500" FT /note="match: cDNAs: Em:AK002558.1 Em:AK008797.1 FT Em:AK020219.1 Em:AK055590.1 Em:BC001955.1 Em:BC005012.1" FT mRNA complement(join(34392053..34392617,34392849..34392998, FT 34393809..34393827)) FT /gene="RPS10" FT /locus_tag="RP11-375E1__A.4-006" FT /product="ribosomal protein S10" FT /note="match: ESTs: Em:BM007985 Em:BM008133" FT mRNA complement(join(34505579..34506229,BX255971.1:112..258, FT BX255971.1:377..401,BX255973.1:115..137, FT BX255973.1:1559..1756,BX255973.1:4595..5059, FT BX255973.1:16504..16889)) FT /gene="RP11-375E1__A.3" FT /locus_tag="RP11-375E1__A.3-001" FT /product="prostrate epithelium specific Ets transcription FT factor (PDEF) (PSE)" FT /note="match: ESTs: Em:AI685592 Em:AW971121 Em:BE563288 FT Em:BE757615 Em:BG179568 Em:BG179568.1 Em:BG328411 FT Em:BG967992 Em:BI770453 Em:BI772270 Em:BU150353.1 FT Em:CA489478.1 Em:CA489702.1 Em:CA489714.1" FT /note="match: cDNAs: Em:AB031549.1 Em:AF071538.1 FT Em:BC021299.1" FT mRNA join(34433916..34434047,34494020..34494145, FT 34495109..34495265,34496419..34496654,34497174..34497329, FT 34497443..34497618,34498020..34498140,34498237..34498364, FT 34499377..34499564,34500198..34503006) FT /gene="PACSIN1" FT /locus_tag="RP11-375E1__A.1-001" FT /product="protein kinase C and casein kinase substrate in FT neurons 1" FT /note="match: cDNAs: Em:AB037800.1 Em:AF104402.1 FT Em:BC014698.1" FT mRNA join(34433916..34434047,34495109..34495265, FT 34496419..34496654,34497174..34497329,34497443..34497618, FT 34498020..34498140,34498237..34498364,34499377..34499564, FT 34500198..34503006) FT /gene="PACSIN1" FT /locus_tag="RP11-375E1__A.1-003" FT /product="protein kinase C and casein kinase substrate in FT neurons 1" FT /note="match: cDNAs: Em:AF242529" FT mRNA join(34452847..34452921,34494020..34494145, FT 34495109..34495491) FT /gene="PACSIN1" FT /locus_tag="RP11-375E1__A.1-002" FT /product="protein kinase C and casein kinase substrate in FT neurons 1" FT /note="match: ESTs: Em:AI822046 Em:AI822097 Em:BX094526.1 FT Em:W04660.1" FT mRNA join(34482666..34482845,34494020..34494145, FT 34495109..34495265,34496419..34496654,34497174..34497329) FT /gene="PACSIN1" FT /locus_tag="RP11-375E1__A.1-005" FT /product="protein kinase C and casein kinase substrate in FT neurons 1" FT /note="match: ESTs: Em:BB641866.1 Em:BF471140.1 FT Em:BI489567.1" FT mRNA join(34482667..34482845,34494020..34494145, FT 34495109..34495471) FT /gene="PACSIN1" FT /locus_tag="RP11-375E1__A.1-004" FT /product="protein kinase C and casein kinase substrate in FT neurons 1" FT /note="match: ESTs: Em:BM548244.1" FT CDS join(34494083..34494145,34495109..34495265, FT 34496419..34496654,34497174..34497329,34497443..34497618, FT 34498020..34498140,34498237..34498364,34499377..34499564, FT 34500198..34500307) FT /gene="PACSIN1" FT /locus_tag="RP11-375E1__A.1-001" FT /standard_name="OTTHUMP00000016231" FT /product="protein kinase C and casein kinase substrate in FT neurons 1" FT /note="match: proteins: Sw:O13154 Sw:Q61644 Sw:Q9BY11 FT Sw:Q9WVE8 Sw:Q9Z0W5" FT /protein_id="CAH73102.1" FT /translation="MSSSYDEASLAPEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMNC FT VQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSLERAWGAIMTEADKVSELHQEVKNN FT LLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLA FT CKEEKLAMTREMNSKTEQSVTPEQQKKLQDKVDKCKQDVQKTQEKYEKVLEDVGKTTPQ FT YMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIRGADAQ FT EDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTTTKKEKQPKKAEGVALTNATGAVESTSQ FT AGDRGSVSSYDRGQPYATEWSDDESGNPFGGSETNGGANPFEDDSKGVRVRALYDYDGQ FT EQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI" FT CDS join(34495172..34495265,34496419..34496654, FT 34497174..34497329,34497443..34497618,34498020..34498140, FT 34498237..34498364,34499377..34499564,34500198..34500307) FT /gene="PACSIN1" FT /locus_tag="RP11-375E1__A.1-003" FT /standard_name="OTTHUMP00000016232" FT /product="protein kinase C and casein kinase substrate in FT neurons 1" FT /protein_id="CAH73103.1" FT /translation="MNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSLERAWGAI FT MTEADKVSELHQEVKNNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPW FT AKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPEQQKKLQDKVDKCKQDVQKT FT QEKYEKVLEDVGKTTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSY FT IHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTTTKKEKQPKKA FT EGVALTNATGAVESTSQAGDRGSVSSYDRGQPYATEWSDDESGNPFGGSETNGGANPFE FT DDSKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYV FT EAI" FT misc_feature 34495435 FT /note="Clone_right_end: RP11-302L10" FT polyA_signal 34502931..34502936 FT polyA_site 34503000 FT polyA_site 34503004 FT polyA_site 34503006 FT polyA_site 34503008 FT polyA_site complement(34505579) FT polyA_signal complement(34505595..34505600) FT misc_feature 34506816 FT /note="Clone_left_end: XX-M24PDR_PCR" FT misc_feature 34507016..34507316 FT /note="annotated region of clone" FT misc_feature 34507216 FT /note="Clone_right_end: XX-M24PDR_PCR" FT CDS complement(join(BX255972.1:123560..123738, FT 34507027..34507173,34507292..34507316,BX255973.1:115..137, FT BX255973.1:1559..1756,BX255973.1:4595..5030)) FT /gene="RP11-375E1__A.3" FT /locus_tag="RP11-375E1__A.3-001" FT /standard_name="OTTHUMP00000016234" FT /product="prostrate epithelium specific Ets transcription FT factor (PDEF) (PSE)" FT /note="match: proteins: Sw:O95238 Sw:Q9WTP3" FT /protein_id="CAI23605.1" FT /translation="MGSASPGLSSVSPSHLLLPPDTVSRTGLEKAAAGAVGLERRDWSP FT SPPATPEQGLSAFYLSYFDMLYPEDSSWAAKAPGASSREEPPEEPEQCPVIDSQAPAGS FT LDLVPGGLTLEEHSLEQVQSMVVGEVLKDIETACKLLNITADPMDWSPSNVQKWLLWTE FT HQYRLPPMGKAFQELAGKELCAMSEEQFRQRSPLGGDVLHAHLDIWKSAAWMKERTSPG FT AIHYCASTSEESWTDSEVDSSCSGQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKI FT EDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKKGIIRKPDISQRLVYQFVHPI" FT mRNA complement(join(BX255972.1:123088..123738, FT 34507027..34507173,34507292..34507316,BX255973.1:115..137, FT BX255973.1:1559..1756,BX255973.1:4595..5059, FT BX255973.1:16504..16889)) FT /gene="RP11-375E1__A.3" FT /locus_tag="RP11-375E1__A.3-001" FT /product="prostrate epithelium specific Ets transcription FT factor (PDEF) (PSE)" FT /note="match: ESTs: Em:AI685592 Em:AW971121 Em:BE563288 FT Em:BE757615 Em:BG179568 Em:BG179568.1 Em:BG328411 FT Em:BG967992 Em:BI770453 Em:BI772270 Em:BU150353.1 FT Em:CA489478.1 Em:CA489702.1 Em:CA489714.1" FT /note="match: cDNAs: Em:AB031549.1 Em:AF071538.1 FT Em:BC021299.1" FT misc_feature 34507317..34533152 FT /note="annotated region of clone" FT CDS complement(join(BX255972.1:123560..123738, FT BX255971.1:112..258,BX255971.1:377..401,34507317..34507339, FT 34508761..34508958,34511797..34512232)) FT /gene="RP11-375E1__A.3" FT /locus_tag="RP11-375E1__A.3-001" FT /standard_name="OTTHUMP00000016234" FT /product="prostrate epithelium specific Ets transcription FT factor (PDEF) (PSE)" FT /note="match: proteins: Sw:O95238 Sw:Q9WTP3" FT /protein_id="CAH73104.1" FT /translation="MGSASPGLSSVSPSHLLLPPDTVSRTGLEKAAAGAVGLERRDWSP FT SPPATPEQGLSAFYLSYFDMLYPEDSSWAAKAPGASSREEPPEEPEQCPVIDSQAPAGS FT LDLVPGGLTLEEHSLEQVQSMVVGEVLKDIETACKLLNITADPMDWSPSNVQKWLLWTE FT HQYRLPPMGKAFQELAGKELCAMSEEQFRQRSPLGGDVLHAHLDIWKSAAWMKERTSPG FT AIHYCASTSEESWTDSEVDSSCSGQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKI FT EDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKKGIIRKPDISQRLVYQFVHPI" FT mRNA complement(join(BX255972.1:123088..123738, FT BX255971.1:112..258,BX255971.1:377..401,34507317..34507339, FT 34508761..34508958,34511797..34512261,34523706..34524091)) FT /gene="RP11-375E1__A.3" FT /locus_tag="RP11-375E1__A.3-001" FT /product="prostrate epithelium specific Ets transcription FT factor (PDEF) (PSE)" FT /note="match: ESTs: Em:AI685592 Em:AW971121 Em:BE563288 FT Em:BE757615 Em:BG179568 Em:BG179568.1 Em:BG328411 FT Em:BG967992 Em:BI770453 Em:BI772270 Em:BU150353.1 FT Em:CA489478.1 Em:CA489702.1 Em:CA489714.1" FT /note="match: cDNAs: Em:AB031549.1 Em:AF071538.1 FT Em:BC021299.1" FT misc_feature 34532939 FT /note="Clone_left_end: RP3-391O22" FT misc_feature complement(34533153..34657847) FT /note="annotated region of clone" FT CDS join(34654379..34654460,34654686..34654883) FT /pseudo FT /locus_tag="RP3-391O22.1-001" FT /product="ribosomal protein L44 (RPL44) pseudogene" FT /note="match: proteins: Sw:P61487 Sw:P83881 Sw:P83882 FT Sw:P83882 Sw:P83882 Sw:P83882 Sw:P83882 Sw:P83883 Sw:Q969Q0 FT Sw:Q9NB33 Tr:Q962S1 Tr:Q9VLT7" FT CDS complement(join(34558342..34558377,34574332..34574681, FT 34614378..34614575,34622402..34622556, FT AL451165.19:6376..6533)) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-001" FT /standard_name="OTTHUMP00000016235" FT /product="novel protein" FT /note="match: proteins: Sw:Q9H6K1" FT /protein_id="CAI20393.1" FT /translation="MEGMDVDLDPELMQKFSCLGTTDKDVLISEFQRLLGFQLNPAGCA FT FFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPPDTQFVKTWRIQNS FT GAEAWPPGVCLKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPSRAGMYQGQWRMCT FT ATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPFASPQKNRQS FT DENNLKDPGGSEFDSISKNTWAPAPDTWAPAPDQTEQDQNRLSQNSVNLSPSSHANNLS FT VVTYSKGLHGPYPFGQS" FT CDS complement(join(34558342..34558377,34574332..34574681, FT 34622402..34622556,AL451165.19:6376..6533)) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-003" FT /standard_name="OTTHUMP00000016237" FT /product="novel protein" FT /note="match: proteins: Sw:Q9H6K1" FT /protein_id="CAI20394.1" FT /translation="MEGMDVDLDPELMQKFSCLGTTDKDVLISEFQRLLGFQLNPAGCA FT FFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPPDTQFVKTWRIQNS FT DVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPFASPQKNRQSDENNLKD FT PGGSEFDSISKNTWAPAPDTWAPAPDQTEQDQNRLSQNSVNLSPSSHANNLSVVTYSKG FT LHGPYPFGQS" FT mRNA complement(join(34555065..34558377,34574332..34574681, FT 34614378..34614575,34622402..34622556, FT AL451165.19:6376..6777)) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:AL559797.1 Em:BE903156.1 FT Em:BE903580.1 Em:BF141975.1 Em:BF560969.1 Em:BF979344.1 FT Em:BG029909.1 Em:BG181468.1 Em:BI158729.1 Em:BI656950.1 FT Em:BI755372.1 Em:BM386977.1 Em:BM461984.1 Em:BM464361.1" FT /note="match: cDNAs: Em:BC002328.1 Em:BC010184.1" FT mRNA complement(join(34555065..34558377,34574332..34574681, FT 34622402..34622556,AL451165.19:6376..6789)) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-003" FT /product="novel protein" FT /note="match: ESTs: Em:AA318315.1 Em:AA383685.1 FT Em:AL558549.1 Em:AW960709.1 Em:BE898102.1" FT /note="match: cDNAs: Em:AK056964.1" FT mRNA complement(join(34558286..34558377,34574332..34574681, FT 34614378..34614575,34622402..34622556,34639613..34639733)) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-002" FT /product="novel protein" FT /note="match: ESTs: Em:AL559797.1" FT CDS complement(join(34558342..34558377,34574332..34574681, FT 34614378..34614575,34622402..34622492)) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-002" FT /standard_name="OTTHUMP00000016236" FT /product="novel protein" FT /protein_id="CAI20395.1" FT /translation="MSFVEDVTIGEGESIPPDTQFVKTWRIQNSGAEAWPPGVCLKYVG FT GDQFGHVNMVMVRSLEPQEIADVSVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILS FT VEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPFASPQKNRQSDENNLKDPGGSEFDS FT ISKNTWAPAPDTWAPAPDQTEQDQNRLSQNSVNLSPSSHANNLSVVTYSKGLHGPYPFG FT QS" FT CDS 34584315..34585035 FT /pseudo FT /locus_tag="RP3-391O22.2-001" FT /product="ribosomal protein L7 (RPL7) pseudogene" FT /note="match: proteins: Sw:P05426 Sw:P14148 Sw:P18124 FT Sw:P18124 Sw:P18124 Sw:P18124 Tr:O95036 Tr:Q15289 Tr:Q90YW3 FT Tr:Q9DG69" FT polyA_signal complement(34555086..34555091) FT polyA_site complement(34555065) FT CDS complement(34544035..34544433) FT /pseudo FT /locus_tag="RP3-391O22.3-001" FT /product="interferon induced transmembrane protein (IFITM) FT pseudogene" FT /note="match: proteins: Sw:P26376 Sw:Q01628 Sw:Q01628 FT Sw:Q01628 Sw:Q01628 Sw:Q01629 Sw:Q01629 Tr:Q95MQ2 Tr:Q9CQW9 FT Tr:Q9D8L6 Tr:Q9R175" FT misc_feature 34657848..34694680 FT /note="annotated region of clone" FT misc_feature 34659847 FT /note="Clone_right_end: RP3-391O22" FT CDS join(complement(34664223..34664380), FT AL031577.1:37297..37451,AL031577.1:45278..45475, FT AL031577.1:85172..85521,AL031577.1:101476..101511) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-001" FT /standard_name="OTTHUMP00000016235" FT /product="novel protein" FT /note="match: proteins: Sw:Q9H6K1" FT /protein_id="CAH70507.1" FT /translation="MEGMDVDLDPELMQKFSCLGTTDKDVLISEFQRLLGFQLNPAGCA FT FFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPPDTQFVKTWRIQNS FT GAEAWPPGVCLKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPSRAGMYQGQWRMCT FT ATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPFASPQKNRQS FT DENNLKDPGGSEFDSISKNTWAPAPDTWAPAPDQTEQDQNRLSQNSVNLSPSSHANNLS FT VVTYSKGLHGPYPFGQS" FT CDS join(complement(34664223..34664380), FT AL031577.1:37297..37451,AL031577.1:85172..85521, FT AL031577.1:101476..101511) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-003" FT /standard_name="OTTHUMP00000016237" FT /product="novel protein" FT /note="match: proteins: Sw:Q9H6K1" FT /protein_id="CAH70508.1" FT /translation="MEGMDVDLDPELMQKFSCLGTTDKDVLISEFQRLLGFQLNPAGCA FT FFLDMTNWNLQAAIGAYYDFESPNISVPSMSFVEDVTIGEGESIPPDTQFVKTWRIQNS FT DVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPFASPQKNRQSDENNLKD FT PGGSEFDSISKNTWAPAPDTWAPAPDQTEQDQNRLSQNSVNLSPSSHANNLSVVTYSKG FT LHGPYPFGQS" FT mRNA join(complement(34664223..34664624), FT AL031577.1:37297..37451,AL031577.1:45278..45475, FT AL031577.1:85172..85521,AL031577.1:101476..104788) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:AL559797.1 Em:BE903156.1 FT Em:BE903580.1 Em:BF141975.1 Em:BF560969.1 Em:BF979344.1 FT Em:BG029909.1 Em:BG181468.1 Em:BI158729.1 Em:BI656950.1 FT Em:BI755372.1 Em:BM386977.1 Em:BM461984.1 Em:BM464361.1" FT /note="match: cDNAs: Em:BC002328.1 Em:BC010184.1" FT mRNA join(complement(34664223..34664636), FT AL031577.1:37297..37451,AL031577.1:85172..85521, FT AL031577.1:101476..104788) FT /gene="RP3-391O22.4" FT /locus_tag="RP3-391O22.4-003" FT /product="novel protein" FT /note="match: ESTs: Em:AA318315.1 Em:AA383685.1 FT Em:AL558549.1 Em:AW960709.1 Em:BE898102.1" FT /note="match: cDNAs: Em:AK056964.1" FT CDS 34683390..34683717 FT /pseudo FT /locus_tag="RP11-140K17.2-001" FT /product="ATPase, H+ transporting, lysosomal (vacuolar FT proton pump) 14kD (ATP6S14) pseudogene" FT /note="match: proteins: Sw:O44091 Sw:P31478 Sw:P50408 FT Sw:Q16864 Sw:Q17029 Sw:Q23680 Sw:Q24583 Sw:Q28029 Sw:Q9I8H3 FT Sw:Q9VNL3 Sw:Q9ZQX4" FT misc_feature 34694681..34810648 FT /note="annotated region of clone" FT misc_feature 34694681 FT /note="Clone_left_end: RP3-375P9" FT CDS 34711953..34712450 FT /pseudo FT /locus_tag="RP3-375P9.2-001" FT /product="ribosomal protein S10 (RPS10) pseudogene" FT /note="match: proteins: Sw:O77302 Sw:P46783 Sw:P63326 FT Sw:Q9VWG3 Tr:Q9NQ39" FT mRNA join(34725183..34725328,34725689..34725731, FT 34730372..34730480,34735685..34735774,34738068..34738172, FT 34741223..34741571) FT /gene="SNRPC" FT /locus_tag="RP3-375P9.1-001" FT /product="small nuclear ribonucleoprotein polypeptide C" FT /note="match: ESTs: Em:AA315500 Em:BE392846 Em:BF185916 FT Em:BG036525 Em:BG170917 Em:BG621217 Em:BI549319 Em:BI831168 FT Em:BM459917" FT /note="match: cDNAs: Em:BC008243.1 Em:U70315.1 Em:X12517.1 FT Em:X63892.1 Em:X96767.1" FT mRNA join(34725302..34725328,34730372..34730480, FT 34735685..34735774,34738068..34738172,34741223..34741491) FT /gene="SNRPC" FT /locus_tag="RP3-375P9.1-003" FT /product="small nuclear ribonucleoprotein polypeptide C" FT /note="match: ESTs: Em:AW961333 Em:T27802" FT CDS join(34725321..34725328,34725689..34725731, FT 34730372..34730480,34735685..34735774,34738068..34738172, FT 34741223..34741347) FT /gene="SNRPC" FT /locus_tag="RP3-375P9.1-001" FT /standard_name="OTTHUMP00000016238" FT /product="small nuclear ribonucleoprotein polypeptide C" FT /note="match: proteins: Sw:Q03369 Sw:Q62241 Tr:P90815 FT Tr:Q9VE17 Tr:Q9ZR19" FT /protein_id="CAI20350.1" FT /translation="MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQ FT AQSLIDKTTAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGGPPMMP FT MMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPPARPMMVPTRPGMTRPDR" FT mRNA join(34725331..34725731,34730372..34730480, FT 34735685..34735774,34738068..34738172,34741223..34741571) FT /gene="SNRPC" FT /locus_tag="RP3-375P9.1-002" FT /product="small nuclear ribonucleoprotein polypeptide C" FT /note="match: ESTs: Em:AA411107 Em:AA454480 Em:BF382572" FT CDS join(34725618..34725731,34730372..34730480, FT 34735685..34735774,34738068..34738172,34741223..34741347) FT /gene="SNRPC" FT /locus_tag="RP3-375P9.1-002" FT /standard_name="OTTHUMP00000016239" FT /product="small nuclear ribonucleoprotein polypeptide C" FT /protein_id="CAI20351.1" FT /translation="MNSASVDGHLSGCRLFLFLSPLFRFYCDYCDTYLTHDSPSVRKTH FT CSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKIPPTPFSAPPPAGAMIPPPPSL FT PGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPP FT ARPMMVPTRPGMTRPDR" FT mRNA join(34725689..34725731,34730372..34730480, FT 34735685..34735774,34738068..34738172,34740708..34740784, FT 34741223..>34741309) FT /gene="SNRPC" FT /locus_tag="RP3-375P9.1-004" FT /product="small nuclear ribonucleoprotein polypeptide C" FT /note="match: ESTs: Em:AV590779" FT CDS join(34730444..34730480,34735685..34735774, FT 34738068..34738172,34741223..34741347) FT /gene="SNRPC" FT /locus_tag="RP3-375P9.1-003" FT /standard_name="OTTHUMP00000016240" FT /product="small nuclear ribonucleoprotein polypeptide C" FT /protein_id="CAI20352.1" FT /translation="MEEQAQSLIDKTTAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGP FT PRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPPARP FT MMVPTRPGMTRPDR" FT polyA_signal 34741543..34741548 FT polyA_site 34741571 FT mRNA join(34759857..34760071,34789430..34789592, FT 34789694..34789732,34791034..34791125,34801994..34802183, FT 34802498..34802638,34803071..34803241,34803933..34804125, FT AL033520.16:12846..12932,AL033520.16:13468..13638, FT AL033520.16:14019..14158,AL033520.16:14558..14699, FT AL033520.16:14953..15146,AL033520.16:15353..16800, FT AL033520.16:21231..21427,AL033520.16:24454..24608, FT AL033520.16:24695..24845,AL033520.16:28083..28345, FT AL033520.16:28813..28921,AL033520.16:29048..29154, FT AL033520.16:29542..34743) FT /gene="RP3-349A12.1" FT /locus_tag="RP3-349A12.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA399609 Em:AA400551 Em:AA731013 FT Em:AI220005 Em:AI244177 Em:AI409427 Em:AW749297 Em:AW749298 FT Em:BE257936 Em:BE378602 Em:BE858400 Em:BF291156 Em:BF590961 FT Em:BI031220 Em:BI339261 Em:BI461302 Em:BM449691 Em:R71867 FT Em:R72920" FT /note="match: cDNAs: Em:AB052142.1 Em:AK000309.1 FT Em:AK001228.1 Em:BC014891.1" FT CDS join(34760028..34760071,34789430..34789592, FT 34789694..34789732,34791034..34791125,34801994..34802183, FT 34802498..34802638,34803071..34803241,34803933..34804125, FT AL033520.16:12846..12932,AL033520.16:13468..13638, FT AL033520.16:14019..14158,AL033520.16:14558..14699, FT AL033520.16:14953..15146,AL033520.16:15353..16800, FT AL033520.16:21231..21427,AL033520.16:24454..24608, FT AL033520.16:24695..24845,AL033520.16:28083..28345, FT AL033520.16:28813..28921,AL033520.16:29048..29154, FT AL033520.16:29542..29667) FT /gene="RP3-349A12.1" FT /locus_tag="RP3-349A12.1-001" FT /standard_name="OTTHUMP00000016242" FT /product="novel protein" FT /note="match: proteins: Sw:Q6BDS2 Tr:O75183 Tr:Q93376 FT Tr:Q9H0F1" FT /protein_id="CAI20353.1" FT /translation="MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEV FT LQNVLELPTWLAITRVYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQS FT PIALASGQSEYGFAEKVVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSD FT LRLTRITDPCRGEVLTFKEITWQTLRIEADATDNGDQDPVTTPLRLITNQGRIQIALKR FT RTKDCNVISSKLMFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAHQRKSLAPEPVQI FT TPPAPSAQQSWAQAFGGSQGNSNSSSSRLSQYFEKFDVKESSYHLLISRLDLHICDDSQ FT SREPGVSANRLMGGAMQLTFRKMAFDYYPFHWAGDSCKHWVRHCEAMETRGQWAQKLVM FT EFQSKMEKWHEETGLKPPWHLGVDSLFRRKADSLSSPRKNPLERSPSQGRQPAFQPPAW FT NRLRSSCMVVRVDDLDIHQVSTAGQPSKKPSTLLSCSRKLHNLPTQVSAIHIEFTEYYF FT PDNQELPVPCPNLYIQLNGLTFTMDPVSLLWGNLFCLDLYRSLEQFKAIYKLEDSSQKD FT EHLDIRLDAFWLKVSFPLEKRERAELHRPQALVFSASGMIATNTRHAPHCSCSDLQSLF FT RGFAAAEFFHSNYDHFPKVPGGFSLLHMLFLHHAFQMDSCLPQPNTLPPQRPKASWDLW FT SVHFTQISLDFEGTENFKGHTLNFVAPFPLSIWACLPLRWQQAQARKLLLASEGRLKPS FT ASFGSPVQSEALAPDSMSHPRSKTEHDLKSLSGLTEVMEILKEGSSGMDNKGPLTELED FT VADVHMLVHSPAHVRVRLDHYQYLALLRLKEVLQRLQEQLTKDTESMTGSPLQNQTACI FT GVLFPSAEVALLMHPAPGAVDADSAGSDSTSLVDSELSPSEDRELKSDASSDQGPASPE FT KVLEESSIENQDVSQERPHSNGELQDSGPLAQQLAGKGHEAVESLQAKKLSRTQASSSP FT AALKPPAGRETAVNGQGELIPLKNIEGELSSAIHMTKDATKEALHATMDLTKEAVSLTK FT DAFSLGRDRMTSTMHKMLSLPPAKEPMAKTDEGVAAPVSGGAARLRFFSMKRTVSQQSF FT DGVSLDSSGPEDRISVDSDGSDSFVMLLESESGPESVPPGSLSNVSDNAGVQGSPLVNN FT YGQGSPAANSSVSPSGEDLIFHPVSVLVLKVNEVSFGIEVRGEDLTVALQAEELTLQQL FT GTVGLWQFLHGQCPGTCFQESSTLKTGHIRPAVGLRFEVGPGAAVHSPLASQNGFLHLL FT LHGCDLELLTSVLSGLGPFLEDEEIPVVVPMQIELLNSSITLKDDIPPIYPTSPGPIPI FT TLAMEHVVLKRSDDGVFHIGAAAQDKPSAEVLKSEKRQPPKEQVFLVPTGEVFEQQVKE FT LPILQKELIETKQALANANQDKEKLLQEIRKYNPFFEL" FT misc_feature 34810549 FT /note="Clone_left_end: RP3-349A12" FT misc_feature 34810649..34942219 FT /note="annotated region of clone" FT misc_feature 34816419 FT /note="Clone_right_end: RP3-375P9" FT polyA_signal 34845271..34845276 FT polyA_signal 34845280..34845285 FT polyA_site 34845291 FT polyA_site complement(34845555) FT polyA_signal complement(34845571..34845576) FT mRNA complement(join(34845555..34846497,34847744..34847840, FT 34848066..34848153,34850709..34850857,34855564..34855866)) FT /gene="TAF11" FT /locus_tag="RP3-349A12.2-001" FT /product="TAF11 RNA polymerase II, TATA box binding protein FT (TBP)-associated factor, 28kDa" FT /note="match: ESTs: Em:AI133520 Em:AU129734 Em:AW239132 FT Em:AW390144 Em:AW990281 Em:BE254026 Em:BE276707 Em:BE793133 FT Em:BE797026 Em:BE884914 Em:BG477491 Em:BG679652 Em:BG751723 FT Em:BI118047 Em:BI458190 Em:BI650695 Em:BI760214" FT /note="match: cDNAs: Em:AF118094.1 Em:BC005603.1 FT Em:D63705.1 Em:X83928.1" FT CDS complement(join(34846367..34846497,34847744..34847840, FT 34848066..34848153,34850709..34850857,34855564..34855734)) FT /gene="TAF11" FT /locus_tag="RP3-349A12.2-001" FT /standard_name="OTTHUMP00000016241" FT /product="TAF11 RNA polymerase II, TATA box binding protein FT (TBP)-associated factor, 28kDa" FT /note="match: proteins: Sw:Q15544 Sw:Q15544 Sw:Q99JX1" FT /protein_id="CAB96725.1" FT /translation="MDDAHESPSDKGGETGESDETAAVPGDPGATDTDGIPEETDGDAD FT VDLKEAAAEEGELESQDVSDLTTVEREDSSLLNPAAKKLKIDTKEKKEKKQKVDEDEIQ FT KMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVG FT EVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQIPNSKHKKIIFF" FT mRNA join(34857042..34857376,34935016..34935096, FT 34937787..34937943,AL591002.9:7248..7544, FT AL591002.9:8310..8385,AL591002.9:8671..8772, FT AL591002.9:8882..8983,AL591002.9:10640..10836, FT AL591002.9:14782..14874,AL591002.9:19860..19980, FT AL591002.9:43031..43617,AL138721.16:4872..4938, FT AL138721.16:10920..11026,AL138721.16:29331..29429, FT AL138721.16:30289..30441,AL138721.16:30594..30701, FT AL138721.16:31767..31931,AL138721.16:33464..33589, FT AL138721.16:33928..33999,AL138721.16:34190..34276, FT AL138721.16:34894..35031,AL138721.16:36539..36709, FT AL138721.16:37725..37822,AL138721.16:39379..42175) FT /gene="ANKS1A" FT /locus_tag="RP11-174N3.1-001" FT /product="ankyrin repeat and sterile alpha motif domain FT containing 1A" FT /note="match: ESTs: Em:AW763115 Em:BE233715 Em:BE755354 FT Em:BI335524 Em:BI690486 Em:BI909164 Em:BM450048" FT /note="match: cDNAs: Em:AF145204.1 Em:AF164792.1 FT Em:BC010633.1 Em:D86982.1" FT CDS join(34857180..34857376,34935016..34935096, FT 34937787..34937943,AL591002.9:7248..7544, FT AL591002.9:8310..8385,AL591002.9:8671..8772, FT AL591002.9:8882..8983,AL591002.9:10640..10836, FT AL591002.9:14782..14874,AL591002.9:19860..19980, FT AL591002.9:43031..43617,AL138721.16:4872..4938, FT AL138721.16:10920..11026,AL138721.16:29331..29429, FT AL138721.16:30289..30441,AL138721.16:30594..30701, FT AL138721.16:31767..31931,AL138721.16:33464..33589, FT AL138721.16:33928..33999,AL138721.16:34190..34276, FT AL138721.16:34894..35031,AL138721.16:36539..36709, FT AL138721.16:37725..37822,AL138721.16:39379..39382) FT /gene="ANKS1A" FT /locus_tag="RP11-174N3.1-001" FT /standard_name="OTTHUMP00000016243" FT /product="ankyrin repeat and sterile alpha motif domain FT containing 1A" FT /note="match: proteins: Sw:Q8WXE0 Sw:Q92625 Tr:Q91VR4 FT Tr:Q9VC09 Tr:Q9VCM6" FT /protein_id="CAI20281.1" FT /translation="MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGGGGG FT GSGGGGGGLGSSSHPLSSLLSMWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDA FT LTNVADSKGCYPLHLAAWKGDAQIVRLLIHQGPSHTRVNEQNNDNETALHCAAQYGHTE FT VVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLA FT ARNGHKAVVQVLLDAGMDSNYQTEMGSALHEAALFGKTDVVQILLAAGTDVNIKDNHGL FT TALDTVRELPSQKSQQIAALIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQKSQGDV FT EKAVTELIIDFDANAEEEGPYEALYNAISCHSLDSMASGRSSDQDSTNKEAEAAGVKPA FT GVRPRERPPPPAKPPPDEEEEDHIDKKYFPLTASEVLSMRPRIHGSAAREEDEHPYELL FT LTAETKKVVLVDGKTKDHRRSSSSRSQDSAEGQDGQVPEQFSGLLHGSSPVCEVGQDPF FT QLLCTAGQSHPDGSPQQGACHKASMQLEETGVHAPGASQPSALDQSKRVGYLTGLPTTN FT SRSHPETLTHTASPHPGGAEEGDRSGARSRAPPTSKPKAELKLSRSLSKSDSDLLTCSP FT TEDATMGSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQERQKISGL FT RTLEQSVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLL FT QAARSLPKVKALGYDGNSPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVN FT VLKVQLLGHRKRIIASLADRPYEEPPQKPPRFSQLRCQDLLSQTSSPLSQNDSCTGRSA FT DLLLPPGDTGRRRHDSLHDPAAPSRAERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQH FT QPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKG FT VKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTY FT EIILTLGQAFEVAYQLALQAQKSRATGASAAEMIETKSSKPVPKPRVGVRKSALEPPDM FT DQDAQSHASVSWVVDPKPDSKRSLSTN" FT mRNA join(AL139100.9:65177..65391,AL139100.9:94750..94912, FT AL139100.9:95014..95052,AL139100.9:96354..96445, FT AL139100.9:107314..107503,AL139100.9:107818..107958, FT AL139100.9:108391..108561,AL139100.9:109253..109445, FT 34823394..34823480,34824016..34824186,34824567..34824706, FT 34825106..34825247,34825501..34825694,34825901..34827348, FT 34831779..34831975,34835002..34835156,34835243..34835393, FT 34838631..34838893,34839361..34839469,34839596..34839702, FT 34840090..34845291) FT /gene="RP3-349A12.1" FT /locus_tag="RP3-349A12.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA399609 Em:AA400551 Em:AA731013 FT Em:AI220005 Em:AI244177 Em:AI409427 Em:AW749297 Em:AW749298 FT Em:BE257936 Em:BE378602 Em:BE858400 Em:BF291156 Em:BF590961 FT Em:BI031220 Em:BI339261 Em:BI461302 Em:BM449691 Em:R71867 FT Em:R72920" FT /note="match: cDNAs: Em:AB052142.1 Em:AK000309.1 FT Em:AK001228.1 Em:BC014891.1" FT CDS join(AL139100.9:65348..65391,AL139100.9:94750..94912, FT AL139100.9:95014..95052,AL139100.9:96354..96445, FT AL139100.9:107314..107503,AL139100.9:107818..107958, FT AL139100.9:108391..108561,AL139100.9:109253..109445, FT 34823394..34823480,34824016..34824186,34824567..34824706, FT 34825106..34825247,34825501..34825694,34825901..34827348, FT 34831779..34831975,34835002..34835156,34835243..34835393, FT 34838631..34838893,34839361..34839469,34839596..34839702, FT 34840090..34840215) FT /gene="RP3-349A12.1" FT /locus_tag="RP3-349A12.1-001" FT /standard_name="OTTHUMP00000016242" FT /product="novel protein" FT /note="match: proteins: Sw:Q6BDS2 Tr:O75183 Tr:Q93376 FT Tr:Q9H0F1" FT /protein_id="CAI20282.1" FT /translation="MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLTNLELDEEV FT LQNVLELPTWLAITRVYCNRASIRIQWTKLKTHPICLCLDKVEVEMKTCEDPRPPNGQS FT PIALASGQSEYGFAEKVVEGMFIIVNSITIKIHSKAFHASFELWQLQGYSVNPNWQQSD FT LRLTRITDPCRGEVLTFKEITWQTLRIEADATDNGDQDPVTTPLRLITNQGRIQIALKR FT RTKDCNVISSKLMFLLDDLLWVLTDSQLKAMMKYAESLSEAMEKSAHQRKSLAPEPVQI FT TPPAPSAQQSWAQAFGGSQGNSNSSSSRLSQYFEKFDVKESSYHLLISRLDLHICDDSQ FT SREPGVSANRLMGGAMQLTFRKMAFDYYPFHWAGDSCKHWVRHCEAMETRGQWAQKLVM FT EFQSKMEKWHEETGLKPPWHLGVDSLFRRKADSLSSPRKNPLERSPSQGRQPAFQPPAW FT NRLRSSCMVVRVDDLDIHQVSTAGQPSKKPSTLLSCSRKLHNLPTQVSAIHIEFTEYYF FT PDNQELPVPCPNLYIQLNGLTFTMDPVSLLWGNLFCLDLYRSLEQFKAIYKLEDSSQKD FT EHLDIRLDAFWLKVSFPLEKRERAELHRPQALVFSASGMIATNTRHAPHCSCSDLQSLF FT RGFAAAEFFHSNYDHFPKVPGGFSLLHMLFLHHAFQMDSCLPQPNTLPPQRPKASWDLW FT SVHFTQISLDFEGTENFKGHTLNFVAPFPLSIWACLPLRWQQAQARKLLLASEGRLKPS FT ASFGSPVQSEALAPDSMSHPRSKTEHDLKSLSGLTEVMEILKEGSSGMDNKGPLTELED FT VADVHMLVHSPAHVRVRLDHYQYLALLRLKEVLQRLQEQLTKDTESMTGSPLQNQTACI FT GVLFPSAEVALLMHPAPGAVDADSAGSDSTSLVDSELSPSEDRELKSDASSDQGPASPE FT KVLEESSIENQDVSQERPHSNGELQDSGPLAQQLAGKGHEAVESLQAKKLSRTQASSSP FT AALKPPAGRETAVNGQGELIPLKNIEGELSSAIHMTKDATKEALHATMDLTKEAVSLTK FT DAFSLGRDRMTSTMHKMLSLPPAKEPMAKTDEGVAAPVSGGAARLRFFSMKRTVSQQSF FT DGVSLDSSGPEDRISVDSDGSDSFVMLLESESGPESVPPGSLSNVSDNAGVQGSPLVNN FT YGQGSPAANSSVSPSGEDLIFHPVSVLVLKVNEVSFGIEVRGEDLTVALQAEELTLQQL FT GTVGLWQFLHGQCPGTCFQESSTLKTGHIRPAVGLRFEVGPGAAVHSPLASQNGFLHLL FT LHGCDLELLTSVLSGLGPFLEDEEIPVVVPMQIELLNSSITLKDDIPPIYPTSPGPIPI FT TLAMEHVVLKRSDDGVFHIGAAAQDKPSAEVLKSEKRQPPKEQVFLVPTGEVFEQQVKE FT LPILQKELIETKQALANANQDKEKLLQEIRKYNPFFEL" FT misc_feature 34941585..34942029 FT /note="Tandem repeat. Single clone region. Short insert FT library of a single pUC clone" FT misc_feature 34942220..35019004 FT /note="annotated region of clone" FT misc_feature 34943495 FT /note="Clone_right_end: RP3-349A12" FT misc_feature 34976504..34976596 FT /note="Sequence from clone PCR only" FT misc_feature 34983207..34983309 FT /note="Sequence from overlapping clone RP1-112I13 FT (AL513214). Assembly confirmed by restriction digest" FT mRNA join(AL033520.16:46494..46828,AL033520.16:124468..124548, FT AL033520.16:127239..127395,34949467..34949763, FT 34950529..34950604,34950890..34950991,34951101..34951202, FT 34952859..34953055,34957001..34957093,34962079..34962199, FT 34985250..34985836,AL138721.16:4872..4938, FT AL138721.16:10920..11026,AL138721.16:29331..29429, FT AL138721.16:30289..30441,AL138721.16:30594..30701, FT AL138721.16:31767..31931,AL138721.16:33464..33589, FT AL138721.16:33928..33999,AL138721.16:34190..34276, FT AL138721.16:34894..35031,AL138721.16:36539..36709, FT AL138721.16:37725..37822,AL138721.16:39379..42175) FT /gene="ANKS1A" FT /locus_tag="RP11-174N3.1-001" FT /product="ankyrin repeat and sterile alpha motif domain FT containing 1A" FT /note="match: ESTs: Em:AW763115 Em:BE233715 Em:BE755354 FT Em:BI335524 Em:BI690486 Em:BI909164 Em:BM450048" FT /note="match: cDNAs: Em:AF145204.1 Em:AF164792.1 FT Em:BC010633.1 Em:D86982.1" FT CDS join(AL033520.16:46632..46828,AL033520.16:124468..124548, FT AL033520.16:127239..127395,34949467..34949763, FT 34950529..34950604,34950890..34950991,34951101..34951202, FT 34952859..34953055,34957001..34957093,34962079..34962199, FT 34985250..34985836,AL138721.16:4872..4938, FT AL138721.16:10920..11026,AL138721.16:29331..29429, FT AL138721.16:30289..30441,AL138721.16:30594..30701, FT AL138721.16:31767..31931,AL138721.16:33464..33589, FT AL138721.16:33928..33999,AL138721.16:34190..34276, FT AL138721.16:34894..35031,AL138721.16:36539..36709, FT AL138721.16:37725..37822,AL138721.16:39379..39382) FT /gene="ANKS1A" FT /locus_tag="RP11-174N3.1-001" FT /standard_name="OTTHUMP00000016243" FT /product="ankyrin repeat and sterile alpha motif domain FT containing 1A" FT /note="match: proteins: Sw:Q8WXE0 Sw:Q92625 Tr:Q91VR4 FT Tr:Q9VC09 Tr:Q9VCM6" FT /protein_id="CAI15138.1" FT /translation="MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGGGGG FT GSGGGGGGLGSSSHPLSSLLSMWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDA FT LTNVADSKGCYPLHLAAWKGDAQIVRLLIHQGPSHTRVNEQNNDNETALHCAAQYGHTE FT VVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLA FT ARNGHKAVVQVLLDAGMDSNYQTEMGSALHEAALFGKTDVVQILLAAGTDVNIKDNHGL FT TALDTVRELPSQKSQQIAALIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQKSQGDV FT EKAVTELIIDFDANAEEEGPYEALYNAISCHSLDSMASGRSSDQDSTNKEAEAAGVKPA FT GVRPRERPPPPAKPPPDEEEEDHIDKKYFPLTASEVLSMRPRIHGSAAREEDEHPYELL FT LTAETKKVVLVDGKTKDHRRSSSSRSQDSAEGQDGQVPEQFSGLLHGSSPVCEVGQDPF FT QLLCTAGQSHPDGSPQQGACHKASMQLEETGVHAPGASQPSALDQSKRVGYLTGLPTTN FT SRSHPETLTHTASPHPGGAEEGDRSGARSRAPPTSKPKAELKLSRSLSKSDSDLLTCSP FT TEDATMGSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQERQKISGL FT RTLEQSVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLL FT QAARSLPKVKALGYDGNSPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVN FT VLKVQLLGHRKRIIASLADRPYEEPPQKPPRFSQLRCQDLLSQTSSPLSQNDSCTGRSA FT DLLLPPGDTGRRRHDSLHDPAAPSRAERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQH FT QPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKG FT VKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTY FT EIILTLGQAFEVAYQLALQAQKSRATGASAAEMIETKSSKPVPKPRVGVRKSALEPPDM FT DQDAQSHASVSWVVDPKPDSKRSLSTN" FT CDS 34991297..34991592 FT /pseudo FT /locus_tag="RP11-527B17.2-001" FT /product="heat shock 10kD protein 1 (chaperonin 10) (HSPE1) FT pseudogene" FT /note="match: proteins: Sw:P26772 Sw:P61603 Sw:Q64433 FT Sw:Q64433 Sw:Q9W6X3 Tr:O42283 Tr:P97601 Tr:Q965Q1 FT Tr:Q9UNM1" FT misc_feature 35017005 FT /note="Clone_left_end: RP11-174N3" FT misc_feature 35019005..35172543 FT /note="annotated region of clone" FT mRNA join(35026025..35026454,35027924..35028030, FT 35046335..35046433,35047293..35047445,35047598..35047705, FT 35048771..>35048830) FT /gene="ANKS1A" FT /locus_tag="RP11-174N3.1-002" FT /product="ankyrin repeat and sterile alpha motif domain FT containing 1A" FT /note="match: ESTs: Em:AL551749" FT polyA_signal 35059158..35059163 FT polyA_site 35059183 FT polyA_site 35059190 FT mRNA join(AL033520.16:46494..46828,AL033520.16:124468..124548, FT AL033520.16:127239..127395,AL591002.9:7248..7544, FT AL591002.9:8310..8385,AL591002.9:8671..8772, FT AL591002.9:8882..8983,AL591002.9:10640..10836, FT AL591002.9:14782..14874,AL591002.9:19860..19980, FT AL591002.9:43031..43617,35021876..35021942, FT 35027924..35028030,35046335..35046433,35047293..35047445, FT 35047598..35047705,35048771..35048935,35050468..35050593, FT 35050932..35051003,35051194..35051280,35051898..35052035, FT 35053543..35053713,35054729..35054826,35056383..35059179) FT /gene="ANKS1A" FT /locus_tag="RP11-174N3.1-001" FT /product="ankyrin repeat and sterile alpha motif domain FT containing 1A" FT /note="match: ESTs: Em:AW763115 Em:BE233715 Em:BE755354 FT Em:BI335524 Em:BI690486 Em:BI909164 Em:BM450048" FT /note="match: cDNAs: Em:AF145204.1 Em:AF164792.1 FT Em:BC010633.1 Em:D86982.1" FT CDS join(AL033520.16:46632..46828,AL033520.16:124468..124548, FT AL033520.16:127239..127395,AL591002.9:7248..7544, FT AL591002.9:8310..8385,AL591002.9:8671..8772, FT AL591002.9:8882..8983,AL591002.9:10640..10836, FT AL591002.9:14782..14874,AL591002.9:19860..19980, FT AL591002.9:43031..43617,35021876..35021942, FT 35027924..35028030,35046335..35046433,35047293..35047445, FT 35047598..35047705,35048771..35048935,35050468..35050593, FT 35050932..35051003,35051194..35051280,35051898..35052035, FT 35053543..35053713,35054729..35054826,35056383..35056386) FT /gene="ANKS1A" FT /locus_tag="RP11-174N3.1-001" FT /standard_name="OTTHUMP00000016243" FT /product="ankyrin repeat and sterile alpha motif domain FT containing 1A" FT /note="match: proteins: Sw:Q8WXE0 Sw:Q92625 Tr:Q91VR4 FT Tr:Q9VC09 Tr:Q9VCM6" FT /protein_id="CAI12437.1" FT /translation="MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGGGGG FT GSGGGGGGLGSSSHPLSSLLSMWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDA FT LTNVADSKGCYPLHLAAWKGDAQIVRLLIHQGPSHTRVNEQNNDNETALHCAAQYGHTE FT VVKVLLEELTDPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLA FT ARNGHKAVVQVLLDAGMDSNYQTEMGSALHEAALFGKTDVVQILLAAGTDVNIKDNHGL FT TALDTVRELPSQKSQQIAALIEDHMTGKRSTKEVDKTPPPQPPLISSMDSISQKSQGDV FT EKAVTELIIDFDANAEEEGPYEALYNAISCHSLDSMASGRSSDQDSTNKEAEAAGVKPA FT GVRPRERPPPPAKPPPDEEEEDHIDKKYFPLTASEVLSMRPRIHGSAAREEDEHPYELL FT LTAETKKVVLVDGKTKDHRRSSSSRSQDSAEGQDGQVPEQFSGLLHGSSPVCEVGQDPF FT QLLCTAGQSHPDGSPQQGACHKASMQLEETGVHAPGASQPSALDQSKRVGYLTGLPTTN FT SRSHPETLTHTASPHPGGAEEGDRSGARSRAPPTSKPKAELKLSRSLSKSDSDLLTCSP FT TEDATMGSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQERQKISGL FT RTLEQSVGEWLESIGLQQYESKLLLNGFDDVHFLGSNVMEEQDLRDIGISDPQHRRKLL FT QAARSLPKVKALGYDGNSPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVN FT VLKVQLLGHRKRIIASLADRPYEEPPQKPPRFSQLRCQDLLSQTSSPLSQNDSCTGRSA FT DLLLPPGDTGRRRHDSLHDPAAPSRAERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQH FT QPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKG FT VKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTY FT EIILTLGQAFEVAYQLALQAQKSRATGASAAEMIETKSSKPVPKPRVGVRKSALEPPDM FT DQDAQSHASVSWVVDPKPDSKRSLSTN" FT misc_feature 35075461..35075496 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirms the assembly" FT polyA_site complement(35085848) FT polyA_signal complement(35085866..35085871) FT misc_feature 35102249..35102970 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirms the assembly" FT CDS complement(join(35086046..35086278,35087005..35087168, FT 35087936..35088117,35088206..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35107797..35107846)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-001" FT /standard_name="OTTHUMP00000016244" FT /product="t-complex 11 homolog (mouse)" FT /protein_id="CAI12438.1" FT /translation="MAPKGILGSFPTAMNLSLEGKVKETVHNAFWDHLKEQLSATPPDF FT SCALELLKEIKEILLSLLLPRQNRLRIEIEEALDMDLLKQEAEHGALKVLYLSKYVLNM FT MALLCAPVRDEAVQKLENITDPVWLLRGIFQVLGRMKMDMVNYTIQSLQPHLQEHSIQY FT ERAKFQELLNKQPSLLNHTTKWLTQAAGDLTMSPPTCPDTSDSSSVAGPSPNEAANNPE FT PLSPTMVLCQGFLNLLLWDLENEEFPETLLMDRTRLQELKSQLHQLTVMASVLLVASSF FT SGSVLFGSPQFVDKLKRITKSLLEDFHSRPEEAILTVSEQVSQEIHQSLKNMGLVALSS FT DNTASLMGQLQNIAKKENCVCSVIDQRIHLFLKCCLVLGVQRSLLDLPGGLTLIEAELA FT ELGQKFVNLTHHNQQVFGPYYTEILKTLISPAQALETKVESV" FT mRNA complement(join(35085851..35086278,35087005..35087168, FT 35087936..35088117,35088206..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35107797..35108002, FT 35108592..35108619)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-001" FT /product="t-complex 11 homolog (mouse)" FT /note="match: cDNAs: Em:AF269223.1" FT mRNA complement(join(35085851..35086278,35087005..35087168, FT 35087936..35088117,35088206..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35103884..35103995, FT 35108524..35108661,35108982..>35109187)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-009" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BG037192 Em:BG700615 Em:BG702631 FT Em:BG716925 Em:BG716975 Em:BG717556 Em:BG718758 Em:BG719247 FT Em:BG719379 Em:BG719695 Em:BG720005 Em:BG721134 Em:BG722302 FT Em:BG722871 Em:BG723171 Em:BG723303 Em:BG723907 Em:BG771813 FT Em:BG772277 Em:BG772567 Em:BG773446 Em:BI458969 Em:BI459596 FT Em:BI460540 Em:BI464795 Em:BI545219 Em:BI559429 Em:BI560575 FT Em:BI560880 Em:BI561278 Em:BI825666 Em:BI828681 Em:BI828696 FT Em:BI829267 Em:BI831565" FT /note="match: cDNAs: Em:AK057234.1" FT CDS complement(join(35086046..35086278,35087005..35087168, FT 35087936..35088117,35088206..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35103884..35103995, FT 35108524..35108661,35108982..>35109187)) FT /codon_start=2 FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-009" FT /standard_name="OTTHUMP00000016249" FT /product="t-complex 11 homolog (mouse)" FT /note="match: proteins: Tr:Q8WWU5 Tr:Q9NQZ9 Tr:Q9NR39" FT /protein_id="CAI12439.1" FT /translation="ACRFRLWRGGHVPRPVAPATAAVCSQAPAFLTVRRPNPPLRRGGT FT LQAARPRGPPSGRQWMTRGGGGGDTISKMPDVKESVPPKYPGDSEGRSCKPETSGPPQE FT DKSGSEDPPPFLSVTGLTETVNEVSKLSNKIGMNCDYYMEEKVLPPSSLEGKVKETVHN FT AFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEIEEALDMDLLKQEA FT EHGALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWLLRGIFQVLGRMKMDMVN FT YTIQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTKWLTQAAGDLTMSPPTCPDTSD FT SSSVAGPSPNEAANNPEPLSPTMVLCQGFLNLLLWDLENEEFPETLLMDRTRLQELKSQ FT LHQLTVMASVLLVASSFSGSVLFGSPQFVDKLKRITKSLLEDFHSRPEEAILTVSEQVS FT QEIHQSLKNMGLVALSSDNTASLMGQLQNIAKKENCVCSVIDQRIHLFLKCCLVLGVQR FT SLLDLPGGLTLIEAELAELGQKFVNLTHHNQQVFGPYYTEILKTLISPAQALETKVESV FT " FT mRNA complement(join(35087963..35088117,35088206..35088423, FT 35088686..35088822,35089894..35090114,35108982..35109087)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-010" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BI825320" FT mRNA complement(join(<35088399..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35103884..35103980, FT 35108524..35108661,35108982..>35109025)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-005" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BG717759" FT CDS complement(join(<35088399..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35103884..35103980, FT 35108524..35108661,35108982..>35109025)) FT /codon_start=2 FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-005" FT /standard_name="OTTHUMP00000016246" FT /product="t-complex 11 homolog (mouse)" FT /protein_id="CAI12440.1" FT /translation="PSGRQWMTRGGGGGDTISKMPDVKESVPPKYPGDSEGRSCKPETS FT GPPQEDKSGSEDPPPCLTETVNEVSKLSNKIGMNCDYYMEEKVLPPSSLEGKVKETVHN FT AFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEIEEALDMDLLKQEA FT EHGALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWLLRGIFQVLGRMKMDMVN FT YTIQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTK" FT mRNA complement(join(<35088206..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35108982..>35109103)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-006" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BG719382 Em:BG723480 Em:BI461356 FT Em:BI520004 Em:BI561414 Em:BI825964 Em:BI829801 Em:BI829920 FT Em:BI831002 Em:BI831280 Em:BI831585" FT CDS complement(join(<35088206..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35108982..>35109103)) FT /codon_start=1 FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-006" FT /standard_name="OTTHUMP00000016247" FT /product="t-complex 11 homolog (mouse)" FT /protein_id="CAI12442.1" FT /translation="GLSHRATPQPAAPPRWYAPGRQAARPTERTPVDDPRRGRRSLEGK FT VKETVHNAFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEIEEALDM FT DLLKQEAEHGALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWLLRGIFQVLGR FT MKMDMVNYTIQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTKWLTQAAGDLTMSPP FT TCPDTSDSSSVAGPSPNEAANNPEPLSPTMVLCQGFLNLLLWDLENEEFPE" FT mRNA complement(join(35088206..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35108524..35108661, FT 35108982..35109116)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-007" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BG700908 Em:BI462052" FT mRNA complement(join(<35088229..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35103884..35103995, FT 35108982..>35109011)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-008" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BG723480" FT CDS complement(join(<35088229..35088423,35088686..35088822, FT 35089894..35090114,35096839..35096959,35103884..35103995, FT 35108982..>35109011)) FT /codon_start=3 FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-008" FT /standard_name="OTTHUMP00000016248" FT /product="t-complex 11 homolog (mouse)" FT /protein_id="CAI12441.1" FT /translation="WMTRGGGGGVLSVTGLTETVNEVSKLSNKIGMNCDYYMEEKVLPP FT SSLEGKVKETVHNAFWDHLKEQLSATPPDFSCALELLKEIKEILLSLLLPRQNRLRIEI FT EEALDMDLLKQEAEHGALKVLYLSKYVLNMMALLCAPVRDEAVQKLENITDPVWLLRGI FT FQVLGRMKMDMVNYTIQSLQPHLQEHSIQYERAKFQELLNKQPSLLNHTTKWLTQAAGD FT LTMSPPTCPDTSDSSSVAGPSPNEAANNPEPLSPTMVLCQGFLNLLLWD" FT mRNA complement(join(<35088686..35088822,35089894..35090114, FT 35096839..35096959,35103884..35103980,35108982..>35109100)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-004" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BI830546" FT CDS complement(join(<35088686..35088822,35089894..35090114, FT 35096839..35096959,35103884..35103980,35108982..>35109100)) FT /codon_start=2 FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-004" FT /standard_name="OTTHUMP00000016245" FT /product="t-complex 11 homolog (mouse)" FT /protein_id="CAI12443.1" FT /translation="FLTVRRPNPPLRRGGTLQAARPRGPPSGRQWMTRGGGGGGLTETV FT NEVSKLSNKIGMNCDYYMEEKVLPPSSLEGKVKETVHNAFWDHLKEQLSATPPDFSCAL FT ELLKEIKEILLSLLLPRQNRLRIEIEEALDMDLLKQEAEHGALKVLYLSKYVLNMMALL FT CAPVRDEAVQKLENITDPVWLLRGIFQVLGRMKMDMVNYTIQSLQPHLQEHSIQYERAK FT FQELLNKQP" FT mRNA complement(join(<35090059..35090114,35096060..35096196, FT 35096839..35096959,35103884..35103995,35107797..35108002, FT 35108592..35108661,35108982..35109041)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-002" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BI459523" FT mRNA complement(join(<35089970..35090114,35096839..35096959, FT 35107797..35108002,35108524..35108661,35108982..35109126)) FT /gene="TCP11" FT /locus_tag="RP11-174N3.3-003" FT /product="t-complex 11 homolog (mouse)" FT /note="match: ESTs: Em:BG721937 Em:BI561882 Em:BI830665" FT misc_feature 35135404 FT /note="Forced join. Gap size estimated to be approximately FT 500bp by restriction digest data" FT misc_feature 35170543 FT /note="Clone_right_end: RP11-174N3" FT misc_feature 35176570 FT /note="Clone_left_end: RP3-329A5" FT misc_feature 35176770..35293695 FT /note="annotated region of clone" FT CDS join(35182196..35182280,35195357..35195479, FT 35196391..35196516,35199502..35199636,35200627..35200752, FT 35200962..35201078,35205679..35205795,35207529..35207651, FT 35208151..35208267,35208918..35209043,35209320..35209436, FT 35209583..35209687,35209981..35210097,35210399..35210557, FT 35210798..35211013,35211371..35211532,35211740..35211907, FT 35212427..35212588,35213005..35213202,35213721..35213873, FT 35213983..35214062,35216333..35216482) FT /locus_tag="RP3-329A5.4-001" FT /standard_name="OTTHUMP00000016250" FT /product="novel EGF-like and CUB domain protein similar to FT mouse signal peptide, CUB domain, EGF-like 1 (Scube1) and FT mouse and human CEGP1" FT /note="match: proteins: Sw:P35555 Sw:P98133 Sw:Q61554 FT Sw:Q9TV36 Tr:O88840 Tr:Q9EQC6 Tr:Q9JJS0 Tr:Q9NQ36 FT Tr:Q9WUH8" FT /protein_id="CAI20187.1" FT /translation="MGSGRVPGLCLLVLLVHARAAQYSKAAQDVDECVEGTDNCHIDAI FT CQNTPRSYKCICKSGYTGDGKHCKDVDECEREDNAGCVHDCVNIPGNYRCTCYDGFHLA FT HDGHNCLDVDECAEGNGGCQQSCVNMMGSYECHCREGFFLSDNQHTCIQRPEEGMNCMN FT KNHGCAHICRETPKGGIACECRPGFELTKNQRDCKLTCNYGNGGCQHTCDDTEQGPRCG FT CHIKFVLHTDGKTCIETCAVNNGGCDSKCHDAATGVHCTCPVGFMLQPDRKTCKDIDEC FT RLNNGGCDHICRNTVGSFECSCKKGYKLLINERNCQDIDECSFDRTCDHICVNTPGSFQ FT CLCHRGYLLYGITHCGDVDECSINRGGCRFGCINTPGSYQCTCPAGQGRLHWNGKDCTE FT PLKCQGSPGASKAMLSCNRSGKKDTCALTCPSRARFLPESENGFTVSCGTPSPRAAPAR FT AGHNGNSTNSNHCHEAAVLSIKQRASFKIKDAKCRLHLRNKGKTEEAGRITGPGGAPCS FT ECQVTFIHLKCDSSRKGKGRRARTPPGKEVTRLTLELEAEVRAEETTASCGLPCLRQRM FT ERRLKGSLKMLRKSINQDRFLLRLAGLDYELAHKPGLVAGERAEPMESCRPGQHRAGTK FT CVSCPQGTYYHGQTEQCVPCPAGTFQEREGQLSCDLCPGSDAHGPLGATNVTTCAGQCP FT PGQHSVDGFKPCQPCPRGTYQPEAGRTLCFPCGGGLTTKHEGAISFQDCDTKVQCSPGH FT YYNTSIHRCIRCAMGSYQPDFRQNFCSRCPGNTSTDFDGSTSVAQCKNRQCGGELGEFT FT GYIESPNYPGNYPAGVECIWNINPPPKRKILIVVPEIFLPSEDECGDVLVMRKNSSPSS FT ITTYETCQTYERPIAFTARSRKLWINFKTSEANSARGFQIPYVTYDEDYEQLVEDIVRD FT GRLYASENHQEILKDKKLIKAFFEVLAHPQNYFKYTEKHKEMLPKSFIKLLRSKVSSFL FT RPYK" FT mRNA join(35182196..35182280,35195357..35195479, FT 35196391..35196516,35199502..35199636,35200627..35200752, FT 35200962..35201078,35205679..35205795,35207529..35207651, FT 35208151..35208267,35208918..35209043,35209320..35209436, FT 35209583..35209687,35209981..35210097,35210399..35210557, FT 35210798..35211013,35211371..35211532,35211740..35211907, FT 35212427..35212588,35213005..35213202,35213721..35213873, FT 35213983..35214062,35216333..35220856) FT /locus_tag="RP3-329A5.4-001" FT /product="novel EGF-like and CUB domain protein similar to FT mouse signal peptide, CUB domain, EGF-like 1 (Scube1) and FT mouse and human CEGP1" FT /note="match: ESTs: Em:AA425778 Em:AI215040 Em:AI252688 FT Em:AI252700 Em:AV704511 Em:AW013830 Em:AW347210 Em:AW347281 FT Em:AW493202 Em:BB569837 Em:BB655147 Em:BE044299 Em:BE943828 FT Em:BF321800 Em:BF321801 Em:BF741459 Em:BM031613 Em:N30265" FT /note="match: cDNAs: Em:AF276425.1 Em:AK016571.1" FT polyA_signal 35220831..35220836 FT polyA_site 35220849 FT polyA_site 35220856 FT mRNA join(35227298..35227504,35248833..35249001, FT 35253905..35253985,35255423..35255622,35258043..35258159, FT 35258418..>35258493) FT /gene="ZNF76" FT /locus_tag="RP3-329A5.7-003" FT /product="zinc finger protein 76 (expressed in testis)" FT /note="match: ESTs: Em:AA326272 Em:AL546322 Em:BF990467 FT Em:BI917097 Em:T49896" FT mRNA join(35227381..35227504,35248833..35249001, FT 35253905..35254176,35255423..>35255554) FT /gene="ZNF76" FT /locus_tag="RP3-329A5.7-002" FT /product="zinc finger protein 76 (expressed in testis)" FT /note="match: ESTs: Em:BI912913" FT mRNA join(35227449..35227618,35248833..35249001, FT 35253905..35253985,35255423..35255622,35258043..35258159, FT 35258418..35258493,35259055..35259180,35259335..35259514, FT 35260331..35260564,35260658..35260821,35261528..35261692, FT 35262233..35262346,35262921..35263762) FT /gene="ZNF76" FT /locus_tag="RP3-329A5.7-001" FT /product="zinc finger protein 76 (expressed in testis)" FT /note="match: ESTs: Em:AA970061 Em:AL546322 Em:AW435939 FT Em:AW949589 Em:BE664503 Em:BE742328 Em:BF062738 Em:BF706006 FT Em:BF921057 Em:BG469612 Em:BG674420 Em:BG755252 Em:BG758274 FT Em:BG759177 Em:BG831654 Em:BI090041 Em:BI711558 Em:BI732060 FT Em:BI754993 Em:BI772253 Em:BI870145 Em:R71951" FT /note="match: cDNAs: Em:BC000133.1 Em:BC002549.1 FT Em:M91592.1" FT misc_feature 35240909..35241167 FT /note="Single clone region. Small insert library of pUC FT clone" FT CDS complement(join(35246954..35247193,35247509..35247596)) FT /pseudo FT /locus_tag="RP3-329A5.1-001" FT /product="ribosomal protein L35A (RPL35A) pseudogene" FT /note="match: proteins: Em:CE04362 Sw:O55142 Sw:P02434 FT Sw:P04646 Sw:P18077" FT CDS join(35248929..35249001,35253905..35253985, FT 35255423..35255622,35258043..35258159,35258418..35258493, FT 35259055..35259180,35259335..35259514,35260331..35260564, FT 35260658..35260821,35261528..35261692,35262233..35262346, FT 35262921..35263025) FT /gene="ZNF76" FT /locus_tag="RP3-329A5.7-001" FT /standard_name="OTTHUMP00000016253" FT /product="zinc finger protein 76 (expressed in testis)" FT /note="match: proteins: Sw:P36508" FT /protein_id="CAI20189.1" FT /translation="MESLGLHTVTLSDGTTAYVQQAVKGEKLLEGQVIQLEDGTTAYIH FT QVTVQKEGYDPSTLEAVQLEDGSTAYIHHPVAVPSESTILAVQTEVGLEDLAAEDDEGF FT SADAVVALEQYASKVLHDSQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAH FT TGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRT FT HTGERPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVR FT IHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRS FT AHGELEATEESEQALYEQQQLEAASAAEESPPPKRPRIAYLSEVKEERDDIPAQVAMVT FT EEDGAPQVALITQDGAQQVSLSPEDLQALGSAISMVTQHGSTTLTIPSPDADLATSGTH FT TVTMVSADGTQTQPVTIITSGAVVAEDSSVASLRHQQVALLATANGTHIAVQLEEQQTL FT EEAINVATAAMQQGAVTLETTVSESGC" FT polyA_signal 35263742..35263747 FT polyA_site 35263763 FT mRNA join(35265629..35265729,35277447..35277587, FT 35278236..35278421,35280079..35280315,35280403..35280549, FT 35285668..35285776,35285950..35286248,35287301..35287467, FT 35287596..35287794,35288661..35288751,35288964..35289548) FT /gene="DEF6" FT /locus_tag="RP3-329A5.5-001" FT /product="differentially expressed in FDCP 6 homolog FT (mouse)" FT /note="match: ESTs: Em:AI571616 Em:AI650482 Em:AI694076 FT Em:AL520761 Em:AL540247 Em:AL561283 Em:AL568296 Em:AW102834 FT Em:AW241501 Em:AW317051 Em:AW593052 Em:BE280697 Em:BE732479 FT Em:BE901024 Em:BG821282 Em:BM144767" FT /note="match: cDNAs: Em:AJ276095.1 Em:BC007702.1 FT Em:BC017504.1" FT CDS join(35265634..35265729,35277447..35277587, FT 35278236..35278421,35280079..35280315,35280403..35280549, FT 35285668..35285776,35285950..35286248,35287301..35287467, FT 35287596..35287794,35288661..35288751,35288964..35289187) FT /gene="DEF6" FT /locus_tag="RP3-329A5.5-001" FT /standard_name="OTTHUMP00000016251" FT /product="differentially expressed in FDCP 6 homolog FT (mouse)" FT /note="match: proteins: Sw:Q6A028 Sw:Q9UH65 Tr:Q9H4E7" FT /protein_id="CAI20190.1" FT /translation="MALRKELLKSIWYAFTALDVEKSGKVSKSQLKVLSHNLYTVLHIP FT HDPVALEEHFRDDDDGPVSSQGYMPYLNKYILDKVEEGAFVKEHFDELCWTLTAKKNYR FT ADSNGNSMLSNQDAFRLWCLFNFLSEDKYPLIMVPDEVEYLLKKVLSSMSLEVSLGELE FT ELLAQEAQVAQTTGGLSVWQFLELFNSGRCLRGVGRDTLSMAIHEVYQELIQDVLKQGY FT LWKRGHLRRNWAERWFQLQPSCLCYFGSEECKEKRGIIPLDAHCCVEVLPDRDGKRCMF FT CVKTANRTYEMSASDTRQRQEWTAAIQMAIRLQAEGKTSLHKDLKQKRREQREQRERRR FT AAKEEELLRLQQLQEEKERKLQELELLQEAQRQAERLLQEEEERRRSQHRELQQALEGQ FT LREAEQARASMQAEMELKEEEAARQRQRIKELEEMQQRLQEALQLEVKARRDEESVRIA FT QTRLLEEEEEKLKQLMQLKEEQERYIERAQQEKEELQQEMAQQSRSLQQAQQQLEEVRQ FT NRQRADEDVEAAQRKLRQASTNVKHWNVQMNRLMHPIEPGDKRPVTSSSFSGFQPPLLA FT HRDSSLKRLTRWGSQGNRTPSPNSNEQQKSLNGGDEAPAPASTPQEDKLDPAPEN" FT mRNA join(<35277515..35277587,35278347..35278421, FT 35280079..35280315,35280403..>35280404) FT /gene="DEF6" FT /locus_tag="RP3-329A5.5-002" FT /product="differentially expressed in FDCP 6 homolog FT (mouse)" FT /note="match: ESTs: Em:AA306449" FT CDS join(<35277515..35277587,35278347..35278421, FT 35280079..35280315,35280403..>35280404) FT /codon_start=2 FT /gene="DEF6" FT /locus_tag="RP3-329A5.5-002" FT /standard_name="OTTHUMP00000016252" FT /product="differentially expressed in FDCP 6 homolog FT (mouse)" FT /protein_id="CAI20191.1" FT /translation="RDDDDGPVSSQGYMPYLNKYILDKDAFRLWCLFNFLSEDKYPLIM FT VPDEVEYLLKKVLSSMSLEVSLGELEELLAQEAQVAQTTGGLSVWQFLELFNSGRCLRG FT VGRDTLSMAIHEVYQELIQDVLKQG" FT mRNA join(35285385..35285776,35285950..>35286007) FT /gene="DEF6" FT /locus_tag="RP3-329A5.5-003" FT /product="differentially expressed in FDCP 6 homolog FT (mouse)" FT /note="match: ESTs: Em:AV618603 Em:BF374715" FT polyA_signal 35289525..35289530 FT polyA_site 35289549 FT misc_feature 35293496 FT /note="Clone_left_end: RP1-109F14" FT CDS complement(join(35442821..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447082..35447093,35447837..35447899,35448089..35448151, FT 35452337..35452401,35454238..>35454488)) FT /codon_start=2 FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-004" FT /standard_name="OTTHUMP00000016264" FT /product="TEA domain family member 3" FT /note="match: proteins: Tr:Q9Z0P8" FT /protein_id="CAD92503.1" FT /translation="LSRPVGSGPEPRATSTIASNSWNASSSPGEAREDGPEGLDKGLDN FT DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRK FT QVSSHIQVLARKKVREYQVGIKVSSHLQVLARRKSREIQSKLKAMNLDQVSKDKALQSM FT ASMSSAQIVSASVLQNKFSPPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPA FT YPIQPPLPPTLSSYEPLAPLPSAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDPDTYS FT KHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADL FT NSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRI FT HRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTS FT EHGAQHHVYKLVKD" FT CDS complement(join(35442821..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447082..35447093,35447837..35447899,35452337..35452401, FT 35454238..>35454488)) FT /codon_start=2 FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-002" FT /standard_name="OTTHUMP00000016262" FT /product="TEA domain family member 3" FT /note="match: proteins: Sw:Q90701" FT /protein_id="CAD92501.1" FT /translation="LSRPVGSGPEPRATSTIASNSWNASSSPGEAREDGPEGLDKGLDN FT DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRK FT QVSSHLQVLARRKSREIQSKLKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKFSPP FT SPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLP FT SAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDPDTYSKHLFVHIGQTNPAFSDPPLEA FT VDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEGPGAFYGVSSQYSSA FT DSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPE FT KYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSEHGAQHHVYKLVKD" FT CDS complement(join(35442821..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447082..35447093,35448089..35448151,35452337..35452401, FT 35454238..>35454488)) FT /codon_start=2 FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-001" FT /standard_name="OTTHUMP00000016261" FT /product="TEA domain family member 3" FT /note="match: proteins: Sw:P70210 Sw:Q99594 Tr:Q71U35 FT Tr:Q8VCA7 Tr:Q96G15" FT /protein_id="CAD92500.1" FT /translation="LSRPVGSGPEPRATSTIASNSWNASSSPGEAREDGPEGLDKGLDN FT DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRK FT QVSSHIQVLARKKVREYQVGIKAMNLDQVSKDKALQSMASMSSAQIVSASVLQNKFSPP FT SPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLP FT SAAASVPVWQDRTIASSRLRLLEYSAFMEVQRDPDTYSKHLFVHIGQTNPAFSDPPLEA FT VDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEGPGAFYGVSSQYSSA FT DSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPE FT KYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSEHGAQHHVYKLVKD" FT CDS complement(join(35442821..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447837..35447899,35452337..35452401,35454238..>35454488)) FT /codon_start=2 FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-003" FT /standard_name="OTTHUMP00000016263" FT /product="TEA domain family member 3" FT /note="match: proteins: Sw:P28347 Sw:P30051 Sw:P48301 FT Sw:Q15561 Sw:Q15562 Sw:Q62296 Sw:Q99594 Tr:Q96BK2" FT /protein_id="CAD92502.1" FT /translation="LSRPVGSGPEPRATSTIASNSWNASSSPGEAREDGPEGLDKGLDN FT DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRK FT QVSSHLQVLARRKSREIQSKLKDQVSKDKALQSMASMSSAQIVSASVLQNKFSPPSPLP FT QAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQPAYPIQPPLPPTLSSYEPLAPLPSAAA FT SVPVWQDRTIASSRLRLLEYSAFMEVQRDPDTYSKHLFVHIGQTNPAFSDPPLEAVDVR FT QIYDKFPEKKGGLKELYEKGPPNAFFLVKFWADLNSTIQEGPGAFYGVSSQYSSADSMT FT ISVSTKVCSFGKQVVEKVETEYARLENGRFVYRIHRSPMCEYMINFIHKLKHLPEKYMM FT NSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSEHGAQHHVYKLVKD" FT mRNA complement(join(35441374..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447837..35447899,35452337..35452401,35454238..>35454488)) FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-003" FT /product="TEA domain family member 3" FT /note="match: ESTs: Em:BF608266 Em:BG470452 Em:BI193781" FT mRNA complement(join(35441374..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447082..35447093,35447837..35447899,35448089..35448151, FT 35452337..35452401,35454238..>35454488)) FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-004" FT /product="TEA domain family member 3" FT mRNA complement(join(35441374..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447082..35447093,35448089..35448151,35452337..35452401, FT 35454238..>35454488)) FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-001" FT /product="TEA domain family member 3" FT /note="match: ESTs: Em:BE730870 Em:BE731877 Em:BF799624 FT Em:BG823047 Em:BI052405 Em:BI052417 Em:BI053153 Em:BI055491 FT Em:BI110073 Em:BI689100 Em:BM010721 Em:BM018550 Em:BM020198 FT Em:W53780 Em:W54739" FT /note="match: cDNAs: Em:AF142482.1" FT mRNA complement(join(35441374..35442934,35443113..35443265, FT 35443343..35443483,35443696..35443869,35444079..35444212, FT 35445088..35445149,35446052..35446101,35446211..35446348, FT 35447082..35447093,35447837..35447899,35452337..35452401, FT 35454238..>35454488)) FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-002" FT /product="TEA domain family member 3" FT polyA_signal complement(35441402..35441407) FT polyA_site complement(35441374) FT polyA_site 35438562 FT polyA_signal 35438538..35438543 FT mRNA join(35436197..35436650,35436724..35436804, FT 35437158..35437306,35437956..35438128,35438357..35438562) FT /gene="RPL10A" FT /locus_tag="RP1-109F14.3-002" FT /product="ribosomal protein L10a" FT /note="match: ESTs: Em:BE391680 Em:BG282547 Em:BG282548 FT Em:BG480029 Em:BG773645 Em:BM010793 Em:BM047320 Em:BM423646 FT Em:BM424233" FT mRNA join(35436197..35436216,35436576..35436804, FT 35437158..35437306,35437956..35438128,35438357..>35438417) FT /gene="RPL10A" FT /locus_tag="RP1-109F14.3-003" FT /product="ribosomal protein L10a" FT /note="match: ESTs: Em:BG747638" FT mRNA join(35436197..35436216,35436576..35436650, FT 35436724..35437062,35437158..35437306,35437956..35438128, FT 35438357..35438562) FT /gene="RPL10A" FT /locus_tag="RP1-109F14.3-004" FT /product="ribosomal protein L10a" FT /note="match: ESTs: Em:AA104457 Em:AA154924 Em:AW583622 FT Em:AW957966 Em:BE254061 Em:BE255801 Em:BE901848 Em:BF141510 FT Em:BF160961 Em:BG172936 Em:BG341456 Em:BG491046 Em:BG964401 FT Em:BI114018 Em:BI557193 Em:BI907825 Em:BI915408 Em:BM456802 FT Em:BM470701" FT mRNA join(35436185..35436216,35436576..35436650, FT 35436724..35437306,35437956..35438128,35438357..35438562) FT /gene="RPL10A" FT /locus_tag="RP1-109F14.3-005" FT /product="ribosomal protein L10a" FT /note="match: ESTs: Em:BE781060 Em:BG679256" FT /note="match: cDNAs: Em:BC013864.1" FT mRNA join(35436185..35436216,35436576..35436650, FT 35436724..35436804,35437158..35437306,35437956..35438128, FT 35438357..35438562) FT /gene="RPL10A" FT /locus_tag="RP1-109F14.3-001" FT /product="ribosomal protein L10a" FT /note="match: ESTs: Em:AV735543 Em:AV762332 Em:BF995152 FT Em:BG530428 Em:BG684287 Em:BI596586 Em:BM017950" FT /note="match: cDNAs: Em:AF401564.1 Em:BC006791.1 FT Em:BC011366.1 Em:U12404.1 Em:X93352.1 Em:Z23090.1" FT CDS join(35436212..35436216,35436576..35436650, FT 35436724..35436804,35437158..35437306,35437956..35438128, FT 35438357..35438527) FT /gene="RPL10A" FT /locus_tag="RP1-109F14.3-001" FT /standard_name="OTTHUMP00000016255" FT /product="ribosomal protein L10a" FT /note="match: proteins: Sw:O14363 Sw:P53026 Sw:P53027 FT Sw:P53028 Sw:P53030 Sw:P62907" FT /protein_id="CAB38627.1" FT /translation="MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQK FT DKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLA FT KKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVL FT CLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY" FT polyA_site 35434881 FT polyA_signal 35434860..35434865 FT mRNA join(35420138..35420570,35423524..35424130, FT 35425333..35425377,35425693..35425761,35426074..35426217, FT 35427108..35427231,35427459..35427537,35428329..35428395, FT 35430566..35430691,35434021..35434880) FT /gene="FANCE" FT /locus_tag="RP1-109F14.1-001" FT /product="Fanconi anemia, complementation group E" FT /note="match: ESTs: Em:AW430967 Em:BG254606 Em:BI051647 FT Em:BI222328 Em:BI774814 Em:BI912628" FT /note="match: cDNAs: Em:AF265210.1 Em:AK013325.1" FT CDS join(35420323..35420570,35423524..35424130, FT 35425333..35425377,35425693..35425761,35426074..35426217, FT 35427108..35427231,35427459..35427537,35428329..35428395, FT 35430566..35430691,35434021..35434122) FT /gene="FANCE" FT /locus_tag="RP1-109F14.1-001" FT /standard_name="OTTHUMP00000016254" FT /product="Fanconi anemia, complementation group E" FT /note="match: proteins: Sw:Q9HB96" FT /protein_id="CAD92504.1" FT /translation="MATPDAGLPGAEGVEPAPWAQLEAPARLLLQALQAGPEGARRGLG FT VLRALGSRGWEPFDWGRLLEALCREEPVVQGPDGRLELKPLLLRLPRICQRNLMSLLMA FT VRPSLPESGLLSVLQIAQQDLAPDPDAWLRALGELLRRDLGVGTSMEGASPLSERCQRQ FT LQSLCRGLGLGGRRLKSPQAPDPEEEENRDSQQPGKRRKDSEEEAASPEGKRVPKRLRC FT WEEEEDHEKERPEHKSLESLADGGSASPIKDQPVMAVKTGEDGSNLDDAKGLAESLELP FT KAIQDQLPRLQQLLKTLEEGLEGLEDAPPVELQLLHECSPSQMDLLCAQLQLPQLSDLG FT LLRLCTWLLALSPDLSLSNATVLTRSLFLGRILSLTSSASRLLTTALTSFCAKYTYPVC FT SALLDPVLQAPGTGPAQTELLCCLVKMESLEPDAQVLMLGQILELPWKEETFLVLQSLL FT ERQVEMTPEKFSVLMEKLCKKGLAATTSMAYAKLMLTVMTKYQANITETQRLGLAMALE FT PNTTFLRKSLKAALKHLGP" FT CDS join(<35410821..35410949,35413988..35414151, FT 35414244..35414354,35417543..>35417643) FT /pseudo FT /locus_tag="RP1-109F14.5-001" FT /product="makorin, ring finger protein, pseudogene 2" FT /note="match: proteins: Sw:Q13064 Sw:Q13434 Sw:Q60764 FT Sw:Q9DD48 Sw:Q9DFG8 Sw:Q9ERV1 Sw:Q9H000 Sw:Q9QXP6 Sw:Q9TT91 FT Sw:Q9UHC7 Tr:Q54A73 Tr:Q8UWH3 Tr:Q9D776 Tr:Q9DFG7 Tr:Q9PTI4 FT Tr:Q9TVX6 Tr:Q9VP20 Tr:Q9VVS2 Tr:Q9VY21" FT polyA_site 35395955 FT polyA_signal 35395943..35395948 FT polyA_signal 35395932..35395937 FT polyA_site 35393170 FT polyA_signal 35393148..35393153 FT CDS join(35378865..35378994,35387904..35388058, FT 35389597..35389735,35391723..35391925,35392106..35392556, FT 35393609..35393856) FT /gene="PPARD" FT /locus_tag="RP1-109F14.2-002" FT /standard_name="OTTHUMP00000016256" FT /product="peroxisome proliferative activated receptor, FT delta" FT /note="match: proteins: Sw:O18924 Sw:O19052 Sw:O35507 FT Sw:P23204 Sw:P35396 Sw:P37230 Sw:P37231 Sw:P37232 Sw:P37233 FT Sw:P37238 Sw:Q03181 Sw:Q07869 Tr:O46478 Tr:Q62879 Tr:Q90Z66 FT Tr:Q9PU75 Tr:Q9QWI0" FT /protein_id="CAB38629.1" FT /translation="MEQPQEEAPEVREEEEKEEVAEAEGAPELNGGPQHALPSSSYTDL FT SRSSSPPSLLDQLQMGCDGASCGSLNMECRVCGDKASGFHYGVHACEGCKGFFRRTIRM FT KLEYEKCERSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTAN FT EGSQYNPQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQA FT EKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVRELTEFAKSIPSFSSLFLNDQVTL FT LKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEFAVKFNA FT LELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLFPKL FT LQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKDMY" FT CDS join(35378865..35378994,35387904..35388058, FT 35389597..35389735,35391723..35391925,35392106..35392564) FT /gene="PPARD" FT /locus_tag="RP1-109F14.2-003" FT /standard_name="OTTHUMP00000016257" FT /product="peroxisome proliferative activated receptor, FT delta" FT /note="match: proteins: Sw:Q03181" FT /protein_id="CAD92505.1" FT /translation="MEQPQEEAPEVREEEEKEEVAEAEGAPELNGGPQHALPSSSYTDL FT SRSSSPPSLLDQLQMGCDGASCGSLNMECRVCGDKASGFHYGVHACEGCKGFFRRTIRM FT KLEYEKCERSCKIQKKNRNKCQYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGLTAN FT EGSQYNPQVADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQA FT EKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVRELTEFAKSIPSFSSLFLNDQVTL FT LKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEFAVKFNA FT LELDDSDLALFIAAIILCGGE" FT mRNA join(35310391..35310458,35314844..35314927, FT 35365275..35365370,35378764..35378994,35387904..35388058, FT 35389597..35389735,35391723..35391925,35392106..35392556, FT 35393609..35395955) FT /gene="PPARD" FT /locus_tag="RP1-109F14.2-002" FT /product="peroxisome proliferative activated receptor, FT delta" FT /note="match: ESTs: Em:AA555207 Em:AI799447 Em:AI860550 FT Em:AL134655 Em:AU131142 Em:AW837037 Em:BE503383 Em:BF369820 FT Em:BF822712 Em:BF954763 Em:BG482262 Em:BG829064 Em:BI343295 FT Em:H41910" FT /note="match: cDNAs: Em:L07592.1" FT mRNA join(35310391..35310458,35314844..35314927, FT 35365275..35365370,35378764..35378994,35387904..35388058, FT 35389597..35389735,35391723..35391925,35392106..35393170) FT /gene="PPARD" FT /locus_tag="RP1-109F14.2-003" FT /product="peroxisome proliferative activated receptor, FT delta" FT /note="match: cDNAs: Em:BC002715.1 Em:BC007578.1" FT misc_feature 35463841..35642725 FT /note="annotated region of clone" FT mRNA join(complement(35464675..35464717),AL022721.1:9353..9603, FT AL022721.1:11440..11504,AL022721.1:15690..15752, FT AL022721.1:16748..16759,AL022721.1:17493..17630, FT AL022721.1:17740..17789,AL022721.1:18692..18753, FT AL022721.1:19629..19762,AL022721.1:19972..20145, FT AL022721.1:20358..20498,AL022721.1:20576..20677, FT AL022721.1:21774..22467) FT /locus_tag="RP1-109F14.6-001" FT /product="Artifact" FT mRNA join(complement(35464675..35464853),AL022721.1:9353..9603, FT AL022721.1:11440..11504,AL022721.1:15690..15752, FT AL022721.1:16748..16759,AL022721.1:17493..17630, FT AL022721.1:17740..17789,AL022721.1:18692..18753, FT AL022721.1:19629..19762,AL022721.1:19972..20145, FT AL022721.1:20358..20498,AL022721.1:20576..20728, FT AL022721.1:20907..22467) FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-001" FT /product="TEA domain family member 3" FT /note="match: cDNAs: Em:AF142482.1 Em:BC091488.1 FT Em:X94439.1" FT /note="match: ESTs: Em:AW204947.1 Em:CN367789.1 FT Em:DA865074.1 Em:DB094289.1 Em:DB155665.1" FT mRNA join(complement(35464675..35464727),AL022721.1:9353..9603, FT AL022721.1:16748..16759,AL022721.1:17493..17630, FT AL022721.1:17740..17789,AL022721.1:18692..18753, FT AL022721.1:19629..19762,AL022721.1:19972..20145, FT AL022721.1:20358..20498,AL022721.1:20576..20728, FT AL022721.1:20907..22467) FT /gene="TEAD3" FT /locus_tag="RP1-109F14.4-005" FT /product="TEA domain family member 3" FT /note="match: cDNAs: Em:BC027877.1" FT misc_feature 35464973 FT /note="Weak data" FT polyA_signal complement(35465668..35465673) FT mRNA complement(join(<35473518..35473630,35473780..35473950, FT 35476986..35477089,35479425..35479744)) FT /gene="TULP1" FT /locus_tag="RP3-340B19.1-002" FT /product="tubby like protein 1" FT /note="match: ESTs: Em:BM467184" FT mRNA complement(join(35465654..35466237,35467758..35467929, FT 35471336..35471434,35471514..35471625,35473518..35473630, FT 35473780..35473950,35476986..35477089,35477411..35477527, FT 35477604..35477705,35478638..35478787,35479425..35479583, FT 35479957..35480047,35480416..35480467,35480589..35480665)) FT /gene="TULP1" FT /locus_tag="RP3-340B19.1-003" FT /product="tubby like protein 1" FT /note="match: ESTs: Em:AA625355 Em:AI344222 Em:AI380477 FT Em:AW824064 Em:BE133515 Em:BE258348 Em:BE780807 Em:BG396153 FT Em:BI737434 Em:BI737806" FT /note="match: cDNAs: Em:AF085681.1 Em:AF105711.1 FT Em:BC014820.1 Em:U82468.1" FT CDS complement(join(35466104..35466237,35467758..35467929, FT 35471336..35471434,35471514..35471625,35473518..35473630, FT 35473780..35473950,35476986..35477089,35477411..35477527, FT 35477604..35477705,35478638..35478787,35479425..35479583, FT 35479957..35480047,35480416..35480467,35480589..35480635)) FT /gene="TULP1" FT /locus_tag="RP3-340B19.1-003" FT /standard_name="OTTHUMP00000016266" FT /product="tubby like protein 1" FT /note="match: proteins: Sw:O00294 Sw:O75386 Sw:P46686 FT Sw:P50586 Sw:P50607 Tr:Q9W2L5" FT /protein_id="CAI20251.1" FT /translation="MPLRDETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKKR FT TEAPESPCPTGSKPRKPGAGRTGRPREEPSPDPAQARAPQTVYARFLRDPEAKKRDPRE FT TFLVARAPDAEDEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSADLKERRAKAQ FT GPRGDLGSPDPPPKPLRVRNKEAPAGEGTKMRKTKKKGSGEADKDPSGSPASARKSPAA FT MFLVGEGSPDKKALKKKGTPKGARKEEEEEEEAATVIKKSNQKGKAKGKGKKKEERAPS FT PPVEVDEPREFVLRPAPQGRTVRCRLTRDKKGMDRGMYPSYFLHLDTEKKVFLLAGRKR FT KRSKTANYLISIDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQNPQRGYSTNVASLRQ FT ELAAVIYETNVLGFRGPRRMTVIIPGMSAENERVPIRPRNASDGLLVRWQNKTLESLIE FT LHNKPPVWNDDSGSYTLNFQGRVTQASVKNFQIVHADDPDYIVLQFGRVAEDAFTLDYR FT YPLCALQAFAIALSSFDGKLACE" FT mRNA complement(join(<35477501..35477527,35477604..35477705, FT 35478638..35478802,35479957..35480047,35480416..35480467, FT 35480589..35480643)) FT /gene="TULP1" FT /locus_tag="RP3-340B19.1-001" FT /product="tubby like protein 1" FT /note="match: ESTs: Em:BE783133" FT CDS complement(join(<35477501..35477527,35477604..35477705, FT 35478638..35478802,35479957..35480047,35480416..35480467, FT 35480589..35480635)) FT /gene="TULP1" FT /locus_tag="RP3-340B19.1-001" FT /standard_name="OTTHUMP00000016265" FT /product="tubby like protein 1" FT /protein_id="CAI20253.1" FT /translation="MPLRDETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKKR FT TEAPESPCPTGSKPRKPGEFLPAEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSS FT ADLKERRAKAQGPRGDLGSPDPPPKPLRVRNKEAPAGEGTKMRKTKKKGSGEADKDP" FT mRNA complement(join(<35477411..35477527,35477604..35477705, FT 35478638..35478787,35479957..35480047,35480416..35480467, FT 35480589..35480652)) FT /gene="TULP1" FT /locus_tag="RP3-340B19.1-004" FT /product="tubby like protein 1" FT /note="match: ESTs: Em:BM451164" FT CDS complement(join(<35477411..35477527,35477604..35477705, FT 35478638..35478787,35479957..35480047,35480416..35480467, FT 35480589..35480635)) FT /gene="TULP1" FT /locus_tag="RP3-340B19.1-004" FT /standard_name="OTTHUMP00000016267" FT /product="tubby like protein 1" FT /protein_id="CAI20252.1" FT /translation="MPLRDETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKKR FT TEAPESPCPTGSKPRKPGEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSADLKE FT RRAKAQGPRGDLGSPDPPPKPLRVRNKEAPAGEGTKMRKTKKKGSGEADKDPSGSPASA FT RKSPAAMFLVGEGSPDKKALKKK" FT mRNA complement(join(35541367..35543719,35544771..35545010, FT 35547813..35547998,35554811..35554894,35558907..35558997, FT 35565025..35565181,35586873..35586987,35587909..35588051, FT 35604791..35604935,35610497..35610620, FT AL590400.5:13956..14115,AL157823.9:21220..21440, FT AL157823.9:29400..29473)) FT /gene="FKBP5" FT /locus_tag="RP3-340B19.6-001" FT /product="FK506 binding protein 5" FT /note="match: ESTs: Em:AA382675 Em:AL039381 Em:AL042081 FT Em:AL046952 Em:AL557335 Em:AU127202 Em:AU132060 Em:AW500704 FT Em:BF035609 Em:BG392941 Em:BG537869 Em:BG899577 Em:BI341219 FT Em:BI711668 Em:BI908305 Em:BI911271 Em:N57686 Em:N63715 FT Em:Z17357" FT /note="match: cDNAs: Em:AF141937.2 Em:AF143809.2 FT Em:AY044168.1 Em:U42031.1 Em:U71321.1" FT misc_feature 35510179..35510184 FT /note="Weak data" FT mRNA join(35512409..35512482,35512645..35512710, FT 35512992..35513446) FT /locus_tag="RP3-340B19.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF573853" FT misc_feature 35516408 FT /note="Clone_left_end: RP3-368C2" FT CDS 35523650..35524041 FT /pseudo FT /locus_tag="RP3-340B19.2-001" FT /product="ribosomal protein S15A (RPS15A) pseudogene" FT /note="match: proteins: Sw:O59432 Sw:P33095 Sw:P33953 FT Sw:P42798 Sw:P48149 Sw:P50891 Sw:P62246 Sw:Q3E7Y3 Tr:O17218 FT Tr:Q9SBL9" FT polyA_site complement(35541367) FT polyA_signal complement(35541383..35541388) FT CDS 35575405..35575711 FT /pseudo FT /locus_tag="RP3-340B19.5-001" FT /product="ribosomal protein L36 (RPL36) pseudogene" FT /note="match: proteins: Em:F37C12 Sw:O80929 Sw:P39032 FT Sw:P47834 Sw:P47964 Sw:P49181 Sw:Q92365 Sw:Q9LRB8 Sw:Q9LZ57 FT Sw:Q9M352 Sw:Q9Y3U8" FT misc_feature 35585355..35585363 FT /note="1329 bases of Tn10 transposon (J01829) removed from FT here. This sequence represents the duplicated flanking FT sequence" FT CDS complement(join(35543612..35543719,35544771..35545010, FT 35547813..35547998,35554811..35554894,35558907..35558997, FT 35565025..35565181,35586873..35586987,35587909..35588051, FT 35604791..35604935,35610497..35610601)) FT /gene="FKBP5" FT /locus_tag="RP3-340B19.6-001" FT /standard_name="OTTHUMP00000016268" FT /product="FK506 binding protein 5" FT /note="match: proteins: Sw:Q13451 Sw:Q64378 Sw:Q9XSH5 FT Sw:Q9XSI2 Sw:Q9XT11" FT /protein_id="CAI20256.1" FT /translation="MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEE FT TPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICH FT LLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPN FT EGATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPR FT YGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKG FT GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC FT DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAK FT EHNERDRRIYANMFKKFAEQDAKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV" FT misc_feature 35634347 FT /note="Clone_right_end: RP3-368C2" FT misc_feature 35642625 FT /note="Clone_right_end: RP3-340B19" FT misc_feature 35642726..35666985 FT /note="annotated region of clone" FT misc_feature 35666786 FT /note="Clone_left_end: RP3-510O8" FT mRNA complement(join(AL033519.42:77627..79979, FT AL033519.42:81031..81270,AL033519.42:84073..84258, FT AL033519.42:91071..91154,AL033519.42:95167..95257, FT AL033519.42:101285..101441,AL033519.42:123133..123247, FT AL033519.42:124169..124311,AL033519.42:141051..141195, FT AL033519.42:146757..146880,35656581..35656740, FT AL157823.9:21220..21440,AL157823.9:29400..29473)) FT /gene="FKBP5" FT /locus_tag="RP3-340B19.6-001" FT /product="FK506 binding protein 5" FT /note="match: ESTs: Em:AA382675 Em:AL039381 Em:AL042081 FT Em:AL046952 Em:AL557335 Em:AU127202 Em:AU132060 Em:AW500704 FT Em:BF035609 Em:BG392941 Em:BG537869 Em:BG899577 Em:BI341219 FT Em:BI711668 Em:BI908305 Em:BI911271 Em:N57686 Em:N63715 FT Em:Z17357" FT /note="match: cDNAs: Em:AF141937.2 Em:AF143809.2 FT Em:AY044168.1 Em:U42031.1 Em:U71321.1" FT misc_feature 35666986..35794269 FT /note="annotated region of clone" FT misc_feature 35673189 FT /note="Weak data in alu" FT mRNA complement(join(AL033519.42:77627..79979, FT AL033519.42:81031..81270,AL033519.42:84073..84258, FT AL033519.42:91071..91154,AL033519.42:95167..95257, FT AL033519.42:101285..101441,AL033519.42:123133..123247, FT AL033519.42:124169..124311,AL033519.42:141051..141195, FT AL033519.42:146757..146880,AL590400.5:13956..14115, FT 35688105..35688325,35696285..35696358)) FT /gene="FKBP5" FT /locus_tag="RP3-340B19.6-001" FT /product="FK506 binding protein 5" FT /note="match: ESTs: Em:AA382675 Em:AL039381 Em:AL042081 FT Em:AL046952 Em:AL557335 Em:AU127202 Em:AU132060 Em:AW500704 FT Em:BF035609 Em:BG392941 Em:BG537869 Em:BG899577 Em:BI341219 FT Em:BI711668 Em:BI908305 Em:BI911271 Em:N57686 Em:N63715 FT Em:Z17357" FT /note="match: cDNAs: Em:AF141937.2 Em:AF143809.2 FT Em:AY044168.1 Em:U42031.1 Em:U71321.1" FT mRNA complement(join(35701644..35701804,35702857..35703141, FT 35703540..35703655,35704618..35704724)) FT /locus_tag="RP3-510O8.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI829873" FT mRNA join(35704855..35705048,35705804..35705949, FT 35706161..35706295,35715038..35715211,35715353..35715424, FT 35716345..35716690) FT /gene="C6orf81" FT /locus_tag="RP3-510O8.7-001" FT /product="chromosome 6 open reading frame 81" FT /note="match: cDNAs: Em:AK058119.1" FT mRNA join(35704855..35705048,35705804..35705949, FT 35706161..35706295,35715038..35715211,35715353..35715424, FT 35716315..35716690) FT /gene="C6orf81" FT /locus_tag="RP3-510O8.7-002" FT /product="chromosome 6 open reading frame 81" FT /note="match: ESTs: Em:AA436106 Em:AA625684 Em:AI125558 FT Em:AI961926 Em:BG181593 Em:BG191121 Em:BG193601 Em:BG203798 FT Em:BG204823 Em:BG205393 Em:BG213272 Em:BG215399 Em:BG215978 FT Em:BG217047 Em:BG219076 Em:BG219568 Em:BG220057 FT Em:BI826655" FT /note="match: cDNAs: Em:AK005672.1 Em:AK015756.1" FT CDS join(35704886..35705048,35705804..35705949, FT 35706161..35706295,35715038..35715211,35715353..35715424, FT 35716345..35716647) FT /gene="C6orf81" FT /locus_tag="RP3-510O8.7-001" FT /standard_name="OTTHUMP00000016269" FT /product="chromosome 6 open reading frame 81" FT /note="match: proteins: Sw:Q5T9G4" FT /protein_id="CAI21635.1" FT /translation="MGKSIPQYLGQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPPL FT CSNSPICIARLAVERERHGRDSGELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEA FT SACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGIRKFRLKIQEHSIKVLELISTIWD FT TELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDL FT LYDILNCQPTQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLA FT DRLLALVIHPEEDVQIQACKVIVSLQYPQDLRARPSSCQPSRSYFKNTE" FT CDS join(35704886..35705048,35705804..35705949, FT 35706161..35706295,35715038..35715211,35715353..35715424, FT 35716315..35716647) FT /gene="C6orf81" FT /locus_tag="RP3-510O8.7-002" FT /standard_name="OTTHUMP00000016270" FT /product="chromosome 6 open reading frame 81" FT /note="match: proteins: Sw:Q80X86" FT /protein_id="CAI21636.1" FT /translation="MGKSIPQYLGQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPPL FT CSNSPICIARLAVERERHGRDSGELRRLLNSLECKQDEYAKSMILHSITRCVYLLEAEA FT SACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGIRKFRLKIQEHSIKVLELISTIWD FT TELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQSDYILAQVQAVRLLSYLAQKNDL FT LYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHE FT SLFGEESRLADRLLALVIHPEEDVQIQACKVIVSLQYPQDLRARPSSCQPSRSYFKNTE FT " FT polyA_signal 35716643..35716648 FT polyA_site 35716684 FT polyA_site 35716690 FT CDS join(35733685..35734083,35734476..35734704) FT /pseudo FT /locus_tag="RP3-510O8.3-001" FT /product="cytidylate kinase (CMPK) pseudogene" FT /note="match: proteins: Sw:P15700 Sw:P30085 Sw:Q29561 FT Sw:Q9DBP5 Tr:Q8VD05 Tr:Q9DCS7 Tr:Q9TW62" FT mRNA join(35744371..35744581,35745236..35745358, FT 35747132..35747329) FT /gene="C6orf126" FT /locus_tag="RP3-510O8.5-003" FT /product="chromosome 6 open reading frame 126" FT /note="match: ESTs: Em:CD513822.1" FT mRNA join(35744392..35744479,35745236..35745358, FT 35745628..35745706,35747132..35747329) FT /gene="C6orf126" FT /locus_tag="RP3-510O8.5-001" FT /product="chromosome 6 open reading frame 126" FT /note="match: cDNAs: Em:AY358823.1" FT CDS join(35744396..35744479,35745236..35745358, FT 35747132..35747227) FT /gene="C6orf126" FT /locus_tag="RP3-510O8.5-004" FT /standard_name="OTTHUMP00000198205" FT /product="chromosome 6 open reading frame 126" FT /note="match: proteins: Tr:Q3UW21.1" FT /protein_id="CAQ08848.1" FT /translation="MAAALALVAGVLSGAVLPLWSALPQYKKKITDRCFHHSECYSGCC FT LMDLDSGGAFCAPRARITMICLPQTKGATNIICPCRMGLTCISKDLMCSRRCHMI" FT CDS join(35744396..35744479,35745236..35745358, FT 35745628..35745706,35747132..35747307) FT /gene="C6orf126" FT /locus_tag="RP3-510O8.5-001" FT /standard_name="OTTHUMP00000016272" FT /product="chromosome 6 open reading frame 126" FT /note="match: proteins: Sw:Q6UWE3.1" FT /protein_id="CAI21638.2" FT /translation="MAAALALVAGVLSGAVLPLWSALPQYKKKITDRCFHHSECYSGCC FT LMDLDSGGAFCAPRARITMICLPQWLELFKGRDRIIFIYEAPTPSLVSAHNQGSYQHHL FT PLPDGLDVHIQGLDVFPPVPYDLEEDAGWSLLPWGHRPWLPPTCSKSSS" FT mRNA join(35744396..35744479,35745236..35745358, FT 35747132..35747329) FT /gene="C6orf126" FT /locus_tag="RP3-510O8.5-004" FT /product="chromosome 6 open reading frame 126" FT /note="match: ESTs: Em:AW665167.1" FT mRNA join(35744467..35744581,35747132..35747329) FT /gene="C6orf126" FT /locus_tag="RP3-510O8.5-002" FT /product="chromosome 6 open reading frame 126" FT /note="match: ESTs: Em:AA861820" FT polyA_signal 35747311..35747316 FT polyA_site 35747329 FT CDS join(<35748910..35748986,35754775..35754897, FT 35755644..35755787) FT /codon_start=3 FT /gene="C6orf127" FT /locus_tag="RP3-510O8.6-001" FT /standard_name="OTTHUMP00000016273" FT /product="chromosome 6 open reading frame 127" FT /protein_id="CAI21640.1" FT /translation="LLFLLFFFLFLLTRGSLSPTKYNLLELKESCIRNQDCETGCCQRA FT PDNCESHCAEKGSEGSLCQTQVFFGQYRACPCLRNLTCIYSKNEKWLSIAYGRCQKIGR FT QKLAKKMFF" FT mRNA join(<35748910..35748986,35754775..35754897, FT 35755644..35755929) FT /gene="C6orf127" FT /locus_tag="RP3-510O8.6-001" FT /product="chromosome 6 open reading frame 127" FT /note="match: ESTs: Em:AI018488" FT CDS join(<35754817..35754897,35761265..35761312) FT /codon_start=1 FT /gene="C6orf127" FT /locus_tag="RP3-510O8.6-002" FT /standard_name="OTTHUMP00000016274" FT /product="chromosome 6 open reading frame 127" FT /protein_id="CAI21641.1" FT /translation="GCCQRAPDNCESHCAEKGSEGSLCQTQLPATPCFLPSNTVRT" FT mRNA join(<35754817..35754897,35761265..35761452) FT /gene="C6orf127" FT /locus_tag="RP3-510O8.6-002" FT /product="chromosome 6 open reading frame 127" FT /note="match: ESTs: Em:BF509739" FT polyA_signal 35755908..35755913 FT polyA_site 35755929 FT polyA_site 35761452 FT polyA_site complement(35762759) FT polyA_signal complement(35762777..35762782) FT mRNA complement(join(35762759..35763054,35763508..35763630, FT 35764982..35765088)) FT /gene="CLPS" FT /locus_tag="RP3-510O8.1-001" FT /product="colipase, pancreatic" FT /note="match: ESTs: Em:AA835124 Em:AA835140 Em:AA835316 FT Em:AA835318 Em:AA844967 Em:AI366744 Em:AW584008 Em:BE047055 FT Em:BE047063 Em:BF507781 Em:BM090963 Em:BM091318 Em:BM091451 FT Em:BM314252" FT /note="match: cDNAs: Em:AK008874.1 Em:AK019005.1 FT Em:BC007061.1 Em:J02883.1 Em:L06329.1" FT CDS complement(join(35762923..35763054,35763508..35763630, FT 35764982..35765065)) FT /gene="CLPS" FT /locus_tag="RP3-510O8.1-001" FT /standard_name="OTTHUMP00000016271" FT /product="colipase, pancreatic" FT /note="match: proteins: Sw:P04118 Sw:P19090 Sw:Q91XL7" FT /protein_id="CAI21642.1" FT /translation="MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCC FT QHSSALGLARCTSMASENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGIC FT HDAGRSKQ" FT mRNA join(35773070..35773859,35782323..35782559, FT 35787214..35787224) FT /locus_tag="RP3-422H11.8-002" FT /product="novel protein" FT /note="match: ESTs: Em:BI553922" FT CDS join(35773448..35773859,35782323..35782559, FT 35787214..35787224) FT /locus_tag="RP3-422H11.8-002" FT /standard_name="OTTHUMP00000016278" FT /product="novel protein" FT /note="match: proteins: Sw:Q9CTN8" FT /protein_id="CAI21643.1" FT /translation="MVKLLPAQEAAKIYHTNYVRNSRAVGVMWGTLTICFSVLVMALFI FT QPYWIGDSVNTPQAGYFGLFSYCVGNVLSSELICKGGPLDFSSIPSRAFKTAMFFVALG FT MFLIIGSIICFSLFFICNTATVYKICAWMQLAAATGLMIGCLVYPDGWDSSEVRRMCGE FT QTGKYTLGHCTIRWAFMLAILSIGDALILSFLAFVLGYRQDKLLPDDYKADGTEEV" FT mRNA join(35779022..35779212,35782323..35782559, FT 35787214..35787597,Z99128.1:7218..7482) FT /locus_tag="RP3-422H11.8-001" FT /product="novel protein" FT /note="match: ESTs: Em:BG826698" FT misc_feature 35794070 FT /note="Clone_left_end: RP3-422H11" FT misc_feature 35794270..35907153 FT /note="annotated region of clone" FT polyA_site complement(35800811) FT polyA_signal complement(35800830..35800835) FT CDS complement(join(35803081..35803265,35806483..35806575, FT 35810312..35810381,35825038..35825145,35836790..35836887, FT 35837259..35837678,35838058..35838271,35838711..35838736, FT 35840340..35840505,35842010..35842116,35854501..35854588, FT 35855801..35855869)) FT /gene="SRPK1" FT /locus_tag="RP3-422H11.1-003" FT /standard_name="OTTHUMP00000016277" FT /product="SFRS protein kinase 1" FT /note="match: proteins: Sw:Q96SB4" FT /protein_id="CAI20543.1" FT /translation="MKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK FT ISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIH FT TDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKK FT LKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQEK FT LEESSTIGQDQTLMERDTEGGAAEINCNGVIEVINYTQNSNNETLRHKEDLHNANDCDV FT QNLNQESSFLSSQNGDSSTSQETDSCTPITSEVSDTMVCQSSSTVGQSFSEQHISQLQE FT SIRAEIPCEDEQEQEHNGPLDNKGKSTAGNFLVNPLEPKNAEKLKVKIADLGNACWHKH FT FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI FT VHIIELIGRIPRRFSLSGKYSQDFFSHRGDLKHITKLKPWGLFEVLVEKYEWSQEEAAG FT FTDFLLPMLELIPEKRATAAECLRHPWLNS" FT mRNA complement(join(35800811..35803265,35806483..35806575, FT 35810312..35810381,35825038..35825145,35836790..35836887, FT 35837259..35837678,35838058..35838271,35838711..35838736, FT 35840340..35840505,35842010..35842116,35854501..35854588, FT 35855801..35855888,35856592..35856700,35858672..35858790, FT 35888245..35888842)) FT /gene="SRPK1" FT /locus_tag="RP3-422H11.1-003" FT /product="SFRS protein kinase 1" FT /note="match: cDNAs: Em:AJ318054.1" FT mRNA complement(join(35800811..35803265,35806114..35806206, FT 35810312..35810381,35825038..35825145,35836790..35836887, FT 35837259..35837678,35838058..35838271,35838711..35838736, FT 35840340..35840505,35842010..35842116,35854501..35854588, FT 35855801..35855888,35856592..35856700,35858672..35858790, FT 35888245..35888305,35888821..35888964)) FT /gene="SRPK1" FT /locus_tag="RP3-422H11.1-001" FT /product="SFRS protein kinase 1" FT /note="match: ESTs: Em:AA309978 Em:AI194422 Em:AL048784 FT Em:AL361124 Em:AL361125 Em:AL522974 Em:AU051027 Em:AU099067 FT Em:AU127190 Em:AU130093 Em:AU131223 Em:AU137616 Em:AV597256 FT Em:AV709216 Em:AW275479 Em:BB839439 Em:BE785466 Em:BE808965 FT Em:BE808980 Em:BG106486 Em:BG400445 Em:BG720853 Em:BG742480 FT Em:BG772464 Em:BI460359 Em:BM147118 Em:BM194212 Em:BM451871 FT Em:BM465520 Em:BM466799" FT /note="match: cDNAs: Em:AB012290.1 Em:AJ224115.1 FT Em:AJ318054.1 Em:AK015754.1 Em:BC005707.1 Em:U09564.1" FT CDS complement(join(35803081..35803265,35806114..35806206, FT 35810312..35810381,35825038..35825145,35836790..35836887, FT 35837259..35837678,35838058..35838271,35838711..35838736, FT 35840340..35840505,35842010..35842116,35854501..35854588, FT 35855801..35855888,35856592..35856700,35858672..35858790, FT 35888245..35888305,35888821..35888833)) FT /gene="SRPK1" FT /locus_tag="RP3-422H11.1-001" FT /standard_name="OTTHUMP00000016275" FT /product="SFRS protein kinase 1" FT /note="match: proteins: Sw:O70551 Sw:O70551 Sw:P78362 FT Sw:Q96SB4 Sw:Q96SB4 Tr:Q8VHL3" FT /protein_id="CAI20544.1" FT /translation="MERKVLALQARKKRTKAKKDKAQRKSETQHRGSAPHSESDLPEQE FT EEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKK FT FVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICM FT VFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS FT VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKKLKKKQKRQAEL FT LEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQEKLEESSTIGQDQ FT TLMERDTEGGAAEINCNGVIEVINYTQNSNNETLRHKEDLHNANDCDVQNLNQESSFLS FT SQNGDSSTSQETDSCTPITSEVSDTMVCQSSSTVGQSFSEQHISQLQESIRAEIPCEDE FT QEQEHNGPLDNKGKSTAGNFLVNPLEPKNAEKLKVKIADLGNACWHKHFTEDIQTRQYR FT SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP FT RKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLEL FT IPEKRATAAECLRHPWLNS" FT mRNA complement(join(35800811..35803265,35806483..35806575, FT 35810312..35810381,35825038..35825145,35836790..35836887, FT 35837259..35837678,35838058..35838271,35838711..35838736, FT 35840340..35840505,35842010..35842116,35854501..35854588, FT 35855801..35855888,35856592..35856700,35858672..35858790, FT 35888245..35888305,35888821..35888964)) FT /gene="SRPK1" FT /locus_tag="RP3-422H11.1-002" FT /product="SFRS protein kinase 1" FT /note="match: cDNAs: Em:AB006036.1 Em:AF043288.1 FT Em:AF102149.1 Em:AK004696.1 Em:U82808.1 Em:U88666.1" FT CDS complement(join(35803081..35803265,35806483..35806575, FT 35810312..35810381,35825038..35825145,35836790..35836887, FT 35837259..35837678,35838058..35838271,35838711..35838736, FT 35840340..35840505,35842010..35842116,35854501..35854588, FT 35855801..35855888,35856592..35856700,35858672..35858790, FT 35888245..35888305,35888821..35888833)) FT /gene="SRPK1" FT /locus_tag="RP3-422H11.1-002" FT /standard_name="OTTHUMP00000016276" FT /product="SFRS protein kinase 1" FT /note="match: proteins: Sw:O54781 Sw:O54781 Sw:P78362 FT Sw:P78362 Sw:Q9UPE1" FT /protein_id="CAI20545.1" FT /translation="MERKVLALQARKKRTKAKKDKAQRKSETQHRGSAPHSESDLPEQE FT EEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKK FT FVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICM FT VFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS FT VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKKLKKKQKRQAEL FT LEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQEKLEESSTIGQDQ FT TLMERDTEGGAAEINCNGVIEVINYTQNSNNETLRHKEDLHNANDCDVQNLNQESSFLS FT SQNGDSSTSQETDSCTPITSEVSDTMVCQSSSTVGQSFSEQHISQLQESIRAEIPCEDE FT QEQEHNGPLDNKGKSTAGNFLVNPLEPKNAEKLKVKIADLGNACWHKHFTEDIQTRQYR FT SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIVHIIELIGRIP FT RRFSLSGKYSQDFFSHRGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLEL FT IPEKRATAAECLRHPWLNS" FT mRNA join(AL157823.9:112137..112327,AL157823.9:115438..115674, FT AL157823.9:120329..120712,35801387..35801651) FT /locus_tag="RP3-422H11.8-001" FT /product="novel protein" FT /note="match: ESTs: Em:BG826698" FT misc_feature 35907154..35962054 FT /note="annotated region of clone" FT polyA_site complement(35911297) FT polyA_signal complement(35911310..35911315) FT mRNA complement(join(35911472..35912117,35918940..35919124, FT 35919222..35919276,35922597..35923297,35927237..35927368, FT 35927491..35927583,35928620..35928689,35928770..35928876, FT 35930303..35930398,35936654..>35936672)) FT /gene="SLC26A8" FT /locus_tag="RP11-482O9.1-002" FT /product="solute carrier family 26, member 8" FT /note="match: cDNAs: Em:AK057276.1" FT mRNA complement(join(35911295..35912117,35918940..35919124, FT 35919222..35919276,35922929..35923297,35927237..35927368, FT 35927491..35927583,35928620..35928689,35928770..35928876, FT 35930303..35930398,35936654..35937599)) FT /gene="SLC26A8" FT /locus_tag="RP11-482O9.1-003" FT /product="solute carrier family 26, member 8" FT /note="match: cDNAs: Em:AK055314.1" FT CDS complement(join(35911677..35912117,35918940..35919124, FT 35919222..35919276,35922929..35923297,35927237..35927368, FT 35927491..35927583,35928620..35928689,35928770..35928876, FT 35930303..35930398,35936654..35936764)) FT /gene="SLC26A8" FT /locus_tag="RP11-482O9.1-003" FT /standard_name="OTTHUMP00000016281" FT /product="solute carrier family 26, member 8" FT /protein_id="CAI40882.1" FT /translation="MVSLQLALSPQFASLVGAGVMLLLMVKMGHFFYTLPNAVLAGIIL FT SNVIPYLETISNLPSLWRQDQYDCALWMMTFSSSIFLGLDIGLIISVVSAFFITTVRSH FT RAKILLLGQIPNTNIYRSINDYREIITIPGVKIFQCCSSITFVNVYYLKHKLLKEVDMV FT KVPLKEEEIFSLFNSSDTNLQGGKICRCFCNCDDLEPLPRILYTERFENKLDPEASSIN FT LIHCSHFESMNTSQTASEDQVPYTVSSVSQKNQGQQYEEVEEVWLPNNSSRNSSPGLPD FT VAESQGRRSLIPYSDASLLPSVHTIILDFSMVHYVDSRGLVVLRQICNAFQNANILILI FT AGCHSSIVRAFERNDFFDAGITKTQLFLSVHDAVLFALSRKVIGSSELSIDESETVIRE FT TYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLELESEQEAGLGLDL FT DLDRELEPEMEPKAETETKTQTEMEPQPETEPEMEPNPKSRPRAHTFPQQRYWPMYHPS FT MASTQSQTQTRTWSVERRRHPMDSYSPEGNSNEDV" FT misc_feature 35961855 FT /note="Clone_left_end: RP1-179N16" FT mRNA join(Z95152.1:141646..141722,Z95152.1:146517..146706, FT Z95152.1:153854..153993,Z95152.1:166118..166234, FT Z95152.1:168307..168488,complement(35960287..35960451), FT complement(35959436..35959585), FT complement(35949898..35949980), FT complement(35944981..35945128), FT complement(35943152..35943265), FT complement(35936654..35936731), FT complement(35930303..35930398), FT complement(35928770..35928876), FT complement(35928620..35928689), FT complement(35927491..35927583), FT complement(35927237..35927368), FT complement(35922929..35923297), FT complement(35919222..35919276), FT complement(35918940..35919124), FT complement(35911297..35912117)) FT /gene="SLC26A8" FT /locus_tag="RP11-482O9.1-001" FT /product="solute carrier family 26, member 8" FT /note="match: ESTs: Em:AA393555 Em:AI015633 Em:BE551631 FT Em:BG723309 Em:BI464675 Em:BI829859 Em:H20613 Em:R11988" FT /note="match: cDNAs: Em:AF314959.1 Em:AF331522.1" FT CDS join(Z95152.1:146519..146706,Z95152.1:153854..153993, FT Z95152.1:166118..166234,Z95152.1:168307..168488, FT complement(35960287..35960451), FT complement(35959436..35959585), FT complement(35949898..35949980), FT complement(35944981..35945128), FT complement(35943152..35943265), FT complement(35936654..35936731), FT complement(35930303..35930398), FT complement(35928770..35928876), FT complement(35928620..35928689), FT complement(35927491..35927583), FT complement(35927237..35927368), FT complement(35922929..35923297), FT complement(35919222..35919276), FT complement(35918940..35919124), FT complement(35911677..35912117)) FT /gene="SLC26A8" FT /locus_tag="RP11-482O9.1-001" FT /standard_name="OTTHUMP00000016279" FT /product="solute carrier family 26, member 8" FT /note="match: proteins: Sw:O70531 Sw:O74377 Sw:P40879 FT Sw:P50443 Tr:Q96PK8 Tr:Q96RN1" FT /protein_id="CAI40884.1" FT /translation="MAQLERSAISGFSSKSRRNSFAYDVKREVYNEETFQQEHKRKASS FT SGNMNINITTFRHHVQCRCSWHRFLRCVLTIFPFLEWMCMYRLKDWLLGDLLAGISVGL FT VQVPQGLTLSLLARQLIPPLNIAYAAFCSSVIYVIFGSCHQMSIGSFFLVSALLINVLK FT VSPFNNGQLVMGSFVKNEFSAPSYLMGYNKSLSVVATTTFLTGIIQLIMGVLGLGFIAT FT YLPESAMSAYLAAVALHIMLSQLTFIFGIMISFHAGPISFFYDIINYCVALPKANSTSI FT LVFLTVVVALRINKCIRISFNQYPIEFPMELFLIIGFTVIANKISMATETSQTLIDMIP FT YSFLLPVTPDFSLLPKIILQAFSLSLVSSFLLIFLGKKIASLHNYSVNSNQDLIAIGLC FT NVVSSFFRSCVFTGAIARTIIQDKSGGRQQFASLVGAGVMLLLMVKMGHFFYTLPNAVL FT AGIILSNVIPYLETISNLPSLWRQDQYDCALWMMTFSSSIFLGLDIGLIISVVSAFFIT FT TVRSHRAKILLLGQIPNTNIYRSINDYREIITIPGVKIFQCCSSITFVNVYYLKHKLLK FT EVDMVKVPLKEEEIFSLFNSSDTNLQGGKICRCFCNCDDLEPLPRILYTERFENKLDPE FT ASSINLIHCSHFESMNTSQTASEDQVPYTVSSVSQKNQGQQYEEVEEVWLPNNSSRNSS FT PGLPDVAESQGRRSLIPYSDASLLPSVHTIILDFSMVHYVDSRGLVVLRQICNAFQNAN FT ILILIAGCHSSIVRAFERNDFFDAGITKTQLFLSVHDAVLFALSRKVIGSSELSIDESE FT TVIRETYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLELESEQEAG FT LGLDLDLDRELEPEMEPKAETETKTQTEMEPQPETEPEMEPNPKSRPRAHTFPQQRYWP FT MYHPSMASTQSQTQTRTWSVERRRHPMDSYSPEGNSNEDV" FT misc_feature complement(35962055..36134002) FT /note="annotated region of clone" FT polyA_site 36107842 FT polyA_site 36107827 FT polyA_site 36107812 FT polyA_signal 36107807..36107812 FT CDS join(36099163..36099177,36100398..36100456, FT 36103530..36103638,36103796..36103825,36104261..36104308, FT 36104433..36104547,36106479..36106561) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-004" FT /standard_name="OTTHUMP00000016284" FT /product="mitogen-activated protein kinase 13" FT /protein_id="CAI19689.1" FT /translation="MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFS FT EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY FT VVTRWYRAPEVILSWMHYNQTGQILHPVPATDPQEGFHSAVPTGQPPG" FT mRNA join(36098646..36098934,36099048..36099177, FT 36100398..36100456,36103530..36103638,36103796..36103825, FT 36104261..36104292) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-002" FT /product="mitogen-activated protein kinase 13" FT /note="match: ESTs: Em:BI837453" FT mRNA join(36098098..36098478,36099048..36099177, FT 36100398..36100456,36103530..36103638,36103796..36103825, FT 36104261..36104308,36104433..36104547,36104656..36104727, FT 36106142..36106221,36106479..36106557,36106656..36106832, FT 36107071..36107842) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-001" FT /product="mitogen-activated protein kinase 13" FT /note="match: ESTs: Em:W38643" FT /note="match: cDNAs: Em:AF004709 Em:AF015256 Em:AF092535 FT Em:BC000433 Em:BC004428 Em:U66243 Em:U93232 Em:Y10487 FT Em:Y10488" FT CDS join(36098360..36098478,36099048..36099177, FT 36100398..36100456,36103530..36103638,36103796..36103825, FT 36104261..36104308,36104433..36104547,36104656..36104727, FT 36106142..36106221,36106479..36106557,36106656..36106832, FT 36107071..36107150) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-001" FT /standard_name="OTTHUMP00000016282" FT /product="mitogen-activated protein kinase 13" FT /note="match: proteins: Sw:O15264" FT /protein_id="CAB08438.1" FT /translation="MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDK FT RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY FT LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE FT LKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL FT FKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQA FT ADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQ FT HIYKEIVNFSPIARKDSRRRSGMKL" FT mRNA join(36098098..36098478,36099048..36099177, FT 36100398..36100456,36103530..36103638,36104261..36104308, FT 36104433..36104547,36104656..36104727,36106142..36106221, FT 36106479..36106557,36106656..36106832,36107071..36107457) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-003" FT /product="mitogen-activated protein kinase 13" FT /note="match: ESTs: Em:BE904841" FT CDS join(36098360..36098478,36099048..36099177, FT 36100398..36100456,36103530..36103638,36104261..36104308, FT 36104433..36104547,36104656..36104727,36106142..36106221, FT 36106479..36106557,36106656..36106832,36107071..36107150) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-003" FT /standard_name="OTTHUMP00000016283" FT /product="mitogen-activated protein kinase 13" FT /protein_id="CAI19690.1" FT /translation="MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDK FT RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY FT LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKDLKPGNLAVNEDCELKILDFGLAR FT HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL FT TQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLEL FT DVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFS FT PIARKDSRRRSGMKL" FT mRNA join(36098440..36098478,36099048..36099177, FT 36100398..36100456,36103530..36103638,36103796..36103825, FT 36104261..36104308,36104433..36104547,36106479..36106984) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-004" FT /product="mitogen-activated protein kinase 13" FT /note="match: ESTs: Em:BM548075" FT mRNA join(36095586..36095732,36098396..36098478, FT 36099048..36099177,36100398..36100456,36103530..36103609) FT /gene="MAPK13" FT /locus_tag="RP1-179N16.4-005" FT /product="mitogen-activated protein kinase 13" FT /note="match: ESTs: Em:BE789116" FT CDS complement(36059768..>36060423) FT /pseudo FT /locus_tag="RP1-179N16.3-001" FT /product="nudix (nucleoside diphosphate linked moiety X) FT type 5 motif (NUDT5) pseudogene" FT /note="match: proteins: Sw:Q9JKX6 Sw:Q9UKK9" FT mRNA complement(join(AL133507.8:4244..5064, FT AL133507.8:11887..12071,AL133507.8:12169..12223, FT AL133507.8:15876..16244,AL133507.8:20184..20315, FT AL133507.8:20438..20530,AL133507.8:21567..21636, FT AL133507.8:21717..21823,AL133507.8:23250..23345, FT AL133507.8:29601..29678,AL133507.8:36099..36212, FT AL133507.8:37928..38075,AL133507.8:42845..42927, FT AL133507.8:52383..52532,AL133507.8:53234..53398, FT 35965515..35965696,35967769..35967885,35980010..35980149, FT 35987297..35987486,35992281..35992357)) FT /gene="SLC26A8" FT /locus_tag="RP11-482O9.1-001" FT /product="solute carrier family 26, member 8" FT /note="match: ESTs: Em:AA393555 Em:AI015633 Em:BE551631 FT Em:BG723309 Em:BI464675 Em:BI829859 Em:H20613 Em:R11988" FT /note="match: cDNAs: Em:AF314959.1 Em:AF331522.1" FT CDS complement(join(AL133507.8:4624..5064, FT AL133507.8:11887..12071,AL133507.8:12169..12223, FT AL133507.8:15876..16244,AL133507.8:20184..20315, FT AL133507.8:20438..20530,AL133507.8:21567..21636, FT AL133507.8:21717..21823,AL133507.8:23250..23345, FT AL133507.8:29601..29678,AL133507.8:36099..36212, FT AL133507.8:37928..38075,AL133507.8:42845..42927, FT AL133507.8:52383..52532,AL133507.8:53234..53398, FT 35965515..35965696,35967769..35967885,35980010..35980149, FT 35987297..35987484)) FT /gene="SLC26A8" FT /locus_tag="RP11-482O9.1-001" FT /standard_name="OTTHUMP00000016279" FT /product="solute carrier family 26, member 8" FT /note="match: proteins: Sw:O70531 Sw:O74377 Sw:P40879 FT Sw:P50443 Tr:Q96PK8 Tr:Q96RN1" FT /protein_id="CAI19692.1" FT /translation="MAQLERSAISGFSSKSRRNSFAYDVKREVYNEETFQQEHKRKASS FT SGNMNINITTFRHHVQCRCSWHRFLRCVLTIFPFLEWMCMYRLKDWLLGDLLAGISVGL FT VQVPQGLTLSLLARQLIPPLNIAYAAFCSSVIYVIFGSCHQMSIGSFFLVSALLINVLK FT VSPFNNGQLVMGSFVKNEFSAPSYLMGYNKSLSVVATTTFLTGIIQLIMGVLGLGFIAT FT YLPESAMSAYLAAVALHIMLSQLTFIFGIMISFHAGPISFFYDIINYCVALPKANSTSI FT LVFLTVVVALRINKCIRISFNQYPIEFPMELFLIIGFTVIANKISMATETSQTLIDMIP FT YSFLLPVTPDFSLLPKIILQAFSLSLVSSFLLIFLGKKIASLHNYSVNSNQDLIAIGLC FT NVVSSFFRSCVFTGAIARTIIQDKSGGRQQFASLVGAGVMLLLMVKMGHFFYTLPNAVL FT AGIILSNVIPYLETISNLPSLWRQDQYDCALWMMTFSSSIFLGLDIGLIISVVSAFFIT FT TVRSHRAKILLLGQIPNTNIYRSINDYREIITIPGVKIFQCCSSITFVNVYYLKHKLLK FT EVDMVKVPLKEEEIFSLFNSSDTNLQGGKICRCFCNCDDLEPLPRILYTERFENKLDPE FT ASSINLIHCSHFESMNTSQTASEDQVPYTVSSVSQKNQGQQYEEVEEVWLPNNSSRNSS FT PGLPDVAESQGRRSLIPYSDASLLPSVHTIILDFSMVHYVDSRGLVVLRQICNAFQNAN FT ILILIAGCHSSIVRAFERNDFFDAGITKTQLFLSVHDAVLFALSRKVIGSSELSIDESE FT TVIRETYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLELESEQEAG FT LGLDLDLDRELEPEMEPKAETETKTQTEMEPQPETEPEMEPNPKSRPRAHTFPQQRYWP FT MYHPSMASTQSQTQTRTWSVERRRHPMDSYSPEGNSNEDV" FT misc_feature complement(36134003..36214220) FT /note="annotated region of clone" FT mRNA join(36210980..36211038,Z84484.1:40097..40329, FT Z84484.1:41838..41903,Z84484.1:42940..43176, FT Z84484.1:44141..44201,Z84484.1:50638..51246, FT Z84484.1:55069..55153,Z84484.1:56364..56531) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-003" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: cDNAs: Em:BC103905.1" FT mRNA join(36210980..36211038,Z84484.1:40097..40329, FT Z84484.1:41838..41903,Z84484.1:42967..43176, FT Z84484.1:44141..44201,Z84484.1:50638..51246, FT Z84484.1:55069..55153,Z84484.1:56364..57372) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-002" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: cDNAs: Em:AK096074.1 Em:BC103906.1 FT Em:BC103907.1" FT polyA_site 36200567 FT polyA_signal 36200545..36200550 FT mRNA join(<36185747..36185787,36193044..36193141, FT 36196679..36196833,36198203..36200567) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-005" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: cDNAs: Em:AK172787.1" FT CDS join(<36185747..36185787,36193044..36193141, FT 36196679..36196833,36198203..36198386) FT /codon_start=2 FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-005" FT /standard_name="OTTHUMP00000197591" FT /product="bromodomain and PHD finger containing, 3" FT /protein_id="CAP19137.1" FT /translation="VWVSVVDWHLKLAGRSLLLPFEDRGDLEPLELVWAKCRGYPSYPA FT LIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQWLPRD FT KVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAMIHLSRVRGPHSFVTSSYL" FT mRNA join(36178275..36178305,36179035..36179337, FT 36181657..36181862,36198408..36200563) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-002" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: cDNAs: Em:AK000751.1" FT CDS join(36168100..36169547,36172435..36172591, FT 36175090..36175221,36177564..36177692,36177993..36178305, FT 36179035..36179337,36181657..36182163,36185694..36185787, FT 36189945..36190042,36193044..36193141,36196679..36196833, FT 36198203..36198386) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-001" FT /standard_name="OTTHUMP00000016287" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: proteins: Sw:Q9ULD4.2" FT /protein_id="CAI21669.1" FT /translation="MRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDI FT DGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPQFPGKSKKPSSKGKKKESCS FT KHASGTSFHLPQPSFRMVDSGIQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAW FT LDMVNEKRRVDGHSLVSADTFELLVDRLEKESYLESRSSGAQQSLIDEDAFCCVCLDDE FT CHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCILCPNKGGAFKQ FT TSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAAIQCH FT KVNCYTAFHVTCAQRAGLFMKIEPMRETSLNGTIFTVRKTAYCEAHSPPGAATARRKGD FT SPRSISETGDEEGLKEGDGEEEEEEEVEEEEQEAQGGVSGSLKGVPKKSKMSLKQKIKK FT EPEEAGQDTPSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGV FT PLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLK FT REQVKVQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMD FT FSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHAR FT RQAENIGYDPERGTHLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLD FT LVSAMRSSGARTRRVRLLRREINALRQKLAQPPPPQPPSLNKTVSNGELPAGPQGDAAV FT LEQALQEEPEDDGDRDDSKLPPPPTLEPTGPAPSLSEQESPPEPPTLKPINDSKPPSRF FT LKPRKVEEDELLEKSPLQLGNEPLQRLLSDNGINRLSLMAPDTPAGTPLSGVGRRTSVL FT FKKAKNGVKLQRSPDRVLENGEDHGVAGSPASPASIEEERHSRKRPRSRSCSESEGERS FT PQQEEETGMTNGFGKHTESGSDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFL FT EGVNGDSDYNGSGRSLLLPFEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHN FT GVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLK FT MLEGRKTSIRKSVQVAYDRAMIHLSRVRGPHSFVTSSYL" FT CDS join(36168100..36169547,36172435..36172591, FT 36175090..36175221,36177564..36177692,36177993..36178305, FT 36185694..36185787,36189945..36190042,36193044..36193141, FT 36196679..36196833,36198203..36198386) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-003" FT /standard_name="OTTHUMP00000197589" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: proteins: Tr:Q17RB6.1" FT /protein_id="CAP19138.1" FT /translation="MRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDI FT DGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPQFPGKSKKPSSKGKKKESCS FT KHASGTSFHLPQPSFRMVDSGIQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAW FT LDMVNEKRRVDGHSLVSADTFELLVDRLEKESYLESRSSGAQQSLIDEDAFCCVCLDDE FT CHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCILCPNKGGAFKQ FT TSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAAIQCH FT KVNCYTAFHVTCAQRAGLFMKIEPMRETSLNGTIFTVRKTAYCEAHSPPGAATARRKGD FT SPRSISETGDEEGLKEGDGEEEEEEEVEEEEQEAQGGVSGSLKGVPKKSKMSLKQKIKK FT EPEEAGQDTPSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGV FT PLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLK FT REQVKVQQAAMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMD FT FSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHAR FT RQAENIGYDPERGTHLPESPKLEDFYRFSWEDGMTNGFGKHTESGSDSECSLGLSGGLA FT FEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYNGSGRSLLLPFEDRGDLEPLELVWA FT KCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDN FT KRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAMIHLSRVRGPHSFV FT TSSYL" FT mRNA join(<36168183..36169547,36172435..36172591, FT 36175090..36175221,36177564..36177692,36177978..36178305, FT 36179035..36179337,36181657..36182163,36185694..36185787, FT 36198203..36200567) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-004" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: cDNAs: Em:BC033652.2" FT /note="match: ESTs: Em:BX501824.1" FT CDS 36168100..>36168486 FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-007" FT /standard_name="OTTHUMP00000197593" FT /product="bromodomain and PHD finger containing, 3" FT /protein_id="CAP19139.1" FT /translation="MRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDI FT DGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPQFPGKSKKPSSKGKKKESCS FT KHASGTSFHLPQPSFRMVDSGIQPE" FT CDS 36168100..>36168385 FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-006" FT /standard_name="OTTHUMP00000197592" FT /product="bromodomain and PHD finger containing, 3" FT /protein_id="CAP19140.1" FT /translation="MRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDI FT DGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPQFPGKSKKPSS" FT mRNA join(36165229..36165397,36168074..>36168486) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-007" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: ESTs: Em:BP873496.1" FT mRNA join(36165173..36165274,36168074..>36168385) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-006" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: ESTs: Em:AL704502.1" FT mRNA join(36164550..36164747,36168074..36169547, FT 36172435..36172591,36175090..36175221,36177564..36177692, FT 36177993..36178305,36179035..36179337,36181657..36182163, FT 36185694..36185787,36189945..36190042,36193044..36193141, FT 36196679..36196833,36198203..36200567) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-001" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: cDNAs: Em:AB033112.1 Em:AK025134.1 FT Em:AK074362.1" FT /note="match: ESTs: Em:AI218482.1 Em:AI693323.1 FT Em:CA945247.1 Em:CR976671.1" FT mRNA join(36164743..36164747,36168074..36169547, FT 36172435..36172591,36175090..36175221,36177564..36177692, FT 36177993..36178305,36185694..36185787,36189945..36190042, FT 36193044..36193141,36196679..36196833,36198203..36200567) FT /gene="BRPF3" FT /locus_tag="RP3-524E15.1-003" FT /product="bromodomain and PHD finger containing, 3" FT /note="match: cDNAs: Em:BC117387.1" FT misc_feature 36214221..36219100 FT /note="annotated region of clone" FT misc_feature 36218901 FT /note="Clone_left_end: RP1-50J22" FT misc_feature 36219101..36365746 FT /note="annotated region of clone" FT mRNA join(complement(Z84485.1:3183..3241),36259097..36259329, FT 36260838..36260903,36261940..36262176,36263141..36263201, FT 36269638..36270246,36274069..36274153,36275364..36275531) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-003" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: cDNAs: Em:BC103905.1" FT mRNA join(complement(Z84485.1:3183..3241),36259097..36259329, FT 36260838..36260903,36261967..36262176,36263141..36263201, FT 36269638..36270246,36274069..36274153,36275364..36276372) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-002" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: cDNAs: Em:AK096074.1 Em:BC103906.1 FT Em:BC103907.1" FT mRNA join(<36238237..36238441,36259097..36259332, FT 36260838..36260903,36261967..36262176,36263141..36263201, FT 36269638..36270246,36274069..36274153,36275364..>36275493) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-001" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: cDNAs: Em:AM182887.1" FT CDS join(36238237..36238441,36259097..36259332, FT 36260838..36260903,36261967..36262176,36263141..36263201, FT 36269638..36270246,36274069..36274153,36275364..36275493) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-001" FT /standard_name="OTTHUMP00000016289" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: proteins: Tr:Q2A6N1.1" FT /protein_id="CAI21612.2" FT /translation="MEEQVFKGDPDTPHSISFSGSGFLSFYQAGAVDALRDLAPRMLET FT AHRFAGTSAGAVIAALAICGIEMDEYLRVLNVGVAEVKKSFLGPLSPSCKMVQMMRQFL FT YRVLPEDSYKVTTGKLHVSLTRLTDGENVVVSEFTSKEELIEAALYCSCFVPVYCGLIP FT PTYRGVRYIDGGFTGMQPCAFWTDAITISTFSGQQDICPRDCPAIFHDFRMFNCSFQFS FT LENIARMTHALFPPDLVILHDYYYRGYEDAVLYLRRLNAVYLNSSSKRVIFPRVEVYCQ FT IELALGNECPERSQPSLRARQASLEGATQPHKEWVPKGDGRGSHGPPVSQPVQTLEFTC FT ESPVSAPVSPLEQPPAQPLASSTPLSLSGMPPVSFPAVHKPPSSTPGSSLPTPPPGLSP FT LSPQQQVQPSGSPARSLHSQAPTSPRPSLGPSTVGAPQTLPRSSLSAFPAQPPVEELGQ FT EQPQAVALLVSSKPKSAVPLVHVKETVSKPYVTESPAEDSNWVNKVFKKNKQKTSGTRK FT GFPRHSGSKKPSSKVQ" FT CDS join(36259177..36259329,36260838..36260903, FT 36261967..36262176,36263141..36263201,36269638..36270246, FT 36274069..36274153,36275364..36275493) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-002" FT /standard_name="OTTHUMP00000180648" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: proteins: Tr:Q3SY95.1 Tr:Q8N8W4.1" FT /protein_id="CAI21613.1" FT /translation="MVQMMRQFLYRVLPEDSYKVTTGKLHVSLTRLTDGENVVVSEFTS FT KEELIEALYCSCFVPVYCGLIPPTYRGVRYIDGGFTGMQPCAFWTDAITISTFSGQQDI FT CPRDCPAIFHDFRMFNCSFQFSLENIARMTHALFPPDLVILHDYYYRGYEDAVLYLRRL FT NAVYLNSSSKRVIFPRVEVYCQIELALGNECPERSQPSLRARQASLEGATQPHKEWVPK FT GDGRGSHGPPVSQPVQTLEFTCESPVSAPVSPLEQPPAQPLASSTPLSLSGMPPVSFPA FT VHKPPSSTPGSSLPTPPPGLSPLSPQQQVQPSGSPARSLHSQAPTSPRPSLGPSTVGAP FT QTLPRSSLSAFPAQPPVEELGQEQPQAVALLVSSKPKSAVPLVHVKETVSKPYVTESPA FT EDSNWVNKVFKKNKQKTSGTRKGFPRHSGSKKPSSKVQ" FT CDS join(36259177..36259329,36260838..36260903, FT 36261940..36262176,36263141..36263201,36269638..36270246, FT 36274069..36274153,36275364..36275493) FT /gene="PNPLA1" FT /locus_tag="RP1-50J22.1-003" FT /standard_name="OTTHUMP00000180660" FT /product="patatin-like phospholipase domain containing 1" FT /note="match: proteins: Tr:Q3SY96.1" FT /protein_id="CAM45844.1" FT /translation="MVQMMRQFLYRVLPEDSYKVTTGKLHVSLTRLTDGENVVVSEFTS FT KEELIEALYCSCFVPVYCGLIPPTYRGVWAFLTLPPQRYIDGGFTGMQPCAFWTDAITI FT STFSGQQDICPRDCPAIFHDFRMFNCSFQFSLENIARMTHALFPPDLVILHDYYYRGYE FT DAVLYLRRLNAVYLNSSSKRVIFPRVEVYCQIELALGNECPERSQPSLRARQASLEGAT FT QPHKEWVPKGDGRGSHGPPVSQPVQTLEFTCESPVSAPVSPLEQPPAQPLASSTPLSLS FT GMPPVSFPAVHKPPSSTPGSSLPTPPPGLSPLSPQQQVQPSGSPARSLHSQAPTSPRPS FT LGPSTVGAPQTLPRSSLSAFPAQPPVEELGQEQPQAVALLVSSKPKSAVPLVHVKETVS FT KPYVTESPAEDSNWVNKVFKKNKQKTSGTRKGFPRHSGSKKPSSKVQ" FT mRNA complement(join(36284950..36285168,36287133..36287211)) FT /locus_tag="RP1-50J22.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG954240" FT polyA_site complement(36333971) FT polyA_signal complement(36333986..36333991) FT mRNA join(36354608..36354707,36359553..36359771) FT /locus_tag="RP1-50J22.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI831895" FT mRNA complement(join(36333971..36334539,36334652..36334752, FT 36336706..36336848,36339107..36339337,36341230..36341355, FT 36343648..36343812,36353311..36353446,36355313..36355560)) FT /gene="ETV7" FT /locus_tag="RP1-50J22.6-001" FT /product="ets variant gene 7 (TEL2 oncogene)" FT /note="match: cDNAs: Em:AJ276205.1 Em:AK026144.1" FT /note="match: ESTs: Em:AI347001" FT CDS complement(join(36334422..36334539,36334652..36334752, FT 36336706..36336848,36339107..36339337,36341230..36341355, FT 36343648..36343812,36353311..36353446,36355313..36355318)) FT /gene="ETV7" FT /locus_tag="RP1-50J22.6-001" FT /standard_name="OTTHUMP00000016290" FT /product="ets variant gene 7 (TEL2 oncogene)" FT /note="match: proteins: Sw:Q9Y603" FT /protein_id="CAI21615.1" FT /translation="MQEGELAISPISPVAAMPPLGTHVQARCEAQINLLGEGGICKLPG FT RLRIQPALWSREDVLHWLRWAEQEYSLPCTAEHGFEMNGRALCILTKDDFRHRAPSSGD FT VLYELLQYIKTQRRALVCGPFFGGIFRLKTPTQHSPVPPEEVTGPSQMDTRRGHLLQPP FT DPGLTSNFGHLDDPGLARWTPGKEESLNLCHCAELGCRTQGVCSFPAMPQAPIDGRIAD FT CRLLWDYVYQLLLDTRYEPYIKWEDKDAKIFRVVDPNGLARLWGNHKNRVNMTYEKMSR FT ALRHYYKLNIIKKEPGQKLLFRFLKTPGKMVQDKHSHLEPLESQEQDRIEFKDKRPEIS FT P" FT mRNA complement(join(36333971..36334539,36334652..36334752, FT 36336706..36336848,36341230..36341355,36343648..36343812, FT 36353311..36353446,36355313..36355560)) FT /gene="ETV7" FT /locus_tag="RP1-50J22.6-002" FT /product="ets variant gene 7 (TEL2 oncogene)" FT /note="match: cDNAs: Em:AF147782.1" FT CDS complement(join(36334422..36334539,36334652..36334752, FT 36336706..36336848,36341230..36341355,36343648..36343812, FT 36353311..36353446,36355313..36355318)) FT /gene="ETV7" FT /locus_tag="RP1-50J22.6-002" FT /standard_name="OTTHUMP00000016291" FT /product="ets variant gene 7 (TEL2 oncogene)" FT /note="match: proteins: Tr:Q90ZS8" FT /protein_id="CAI21616.1" FT /translation="MQEGELAISPISPVAAMPPLGTHVQARCEAQINLLGEGGICKLPG FT RLRIQPALWSREDVLHWLRWAEQEYSLPCTAEHGFEMNGRALCILTKDDFRHRAPSSGD FT VLYELLQYIKTQRRALVCGPFFGGIFRLKTPTQHSPVPPEDCRLLWDYVYQLLLDTRYE FT PYIKWEDKDAKIFRVVDPNGLARLWGNHKNRVNMTYEKMSRALRHYYKLNIIKKEPGQK FT LLFRFLKTPGKMVQDKHSHLEPLESQEQDRIEFKDKRPEISP" FT misc_feature 36365646 FT /note="Clone_right_end: RP1-50J22" FT misc_feature 36365747..36399000 FT /note="annotated region of clone" FT misc_feature 36376118..36376189 FT /note="Single clone region" FT mRNA complement(join(36368240..36368361,36393691..36393868, FT AL136135.19:7637..7763,AL136135.19:11412..11766)) FT /locus_tag="RP3-347L7.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI562222" FT misc_feature 36381240 FT /note="Clone_left_end: RP11-301C18" FT misc_feature 36398900 FT /note="Clone_right_end: RP3-347L7" FT misc_feature 36399001..36445599 FT /note="annotated region of clone" FT mRNA complement(join(AL133263.8:2594..2715, FT AL133263.8:28045..28222,36406537..36406663, FT 36410312..36410666)) FT /locus_tag="RP3-347L7.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI562222" FT mRNA join(36410764..36410888,36437829..36438034, FT 36442566..36442839,complement(Z85986.1:144116..144218), FT complement(Z85986.1:143628..143748), FT complement(Z85986.1:141580..141777), FT complement(Z85986.1:138515..138625), FT complement(Z85986.1:132196..136456)) FT /gene="KCTD20" FT /locus_tag="RP1-108K11.1-001" FT /product="potassium channel tetramerisation domain FT containing 20" FT /note="match: ESTs: Em:BI546837 Em:BM459015" FT mRNA join(36410850..36410888,36411195..36411497) FT /locus_tag="RP11-301C18.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW236115 Em:AW270844" FT CDS join(36442619..36442839, FT complement(Z85986.1:144116..144218), FT complement(Z85986.1:143628..143748), FT complement(Z85986.1:141580..141777), FT complement(Z85986.1:138515..138625), FT complement(Z85986.1:136164..136456)) FT /gene="KCTD20" FT /locus_tag="RP1-108K11.1-001" FT /standard_name="OTTHUMP00000016292" FT /product="potassium channel tetramerisation domain FT containing 20" FT /note="match: proteins: Tr:Q9CWT1" FT /protein_id="CAH72192.1" FT /translation="MPLAEDIKGSCFQSGNKRNHEPFIAPERFGNSSVGFGSNSHSQAP FT EKVTLLVDGTRFVVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISATVF FT RTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIRCQDLSALLHELSNDGAHKQ FT FDHYLEELILPIMVGCAKKGERECHIVVLTDEDSVDWDEDHPPPMGEEYSQILYSSKLY FT RFFKYIENRDVAKTVLKERGLKNIRIGIEGYPTCKEKIKRRPGGRSEVIYNYVQRPFIQ FT MSWEKEEGKSRHVDFQCVRSKSLTNLVAAGDDVLEDQEILMHHPPQVDELDRLNAPLSQ FT MASNDFQD" FT misc_feature 36445400 FT /note="Clone_left_end: RP1-108K11" FT misc_feature complement(36445600..36591115) FT /note="annotated region of clone" FT mRNA join(AL136135.19:11864..11988,AL136135.19:38929..39134, FT AL136135.19:43666..43939,36446898..36447000, FT 36447368..36447488,36449339..36449536,36452491..36452601, FT 36454660..36458920) FT /gene="KCTD20" FT /locus_tag="RP1-108K11.1-001" FT /product="potassium channel tetramerisation domain FT containing 20" FT /note="match: ESTs: Em:BI546837 Em:BM459015" FT polyA_signal 36571188..36571193 FT CDS join(36564540..36564745,36566626..36566760, FT 36568929..36568967,36569485..36569571,36569739..36569766) FT /gene="SFRS3" FT /locus_tag="RP1-108K11.3-001" FT /standard_name="OTTHUMP00000016294" FT /product="splicing factor, arginine/serine-rich 3" FT /note="match: proteins: Sw:P84103 Sw:P84104 Tr:Q9D6W4" FT /protein_id="CAI19115.1" FT /translation="MHRDSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNP FT PGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEKRSRNRGPPPSWGRRPRDDY FT RRRSPPPRRRSPRRRSFSRSRSRSLSRDRRRERSLSRERNHKPSRSFSRSRSRSRSNER FT K" FT mRNA join(36562145..36562258,36564538..36564745, FT 36566626..36566760,36568929..36568967,36569485..36569571, FT 36569739..36571209) FT /gene="SFRS3" FT /locus_tag="RP1-108K11.3-001" FT /product="splicing factor, arginine/serine-rich 3" FT /note="match: cDNAs: Em:AF107405.1 Em:BC000914.1 FT Em:D28423.1" FT mRNA join(36562168..36562258,36564538..36564745, FT 36566626..36566760,36567598..36568053,36568929..36568967, FT 36569485..36569570,36569739..36569817) FT /gene="SFRS3" FT /locus_tag="RP1-108K11.3-002" FT /product="splicing factor, arginine/serine-rich 3" FT /note="match: ESTs: Em:BI683913 Em:C17993" FT CDS join(AL136135.19:43719..43939,36446898..36447000, FT 36447368..36447488,36449339..36449536,36452491..36452601, FT 36454660..36454952) FT /gene="KCTD20" FT /locus_tag="RP1-108K11.1-001" FT /standard_name="OTTHUMP00000016292" FT /product="potassium channel tetramerisation domain FT containing 20" FT /note="match: proteins: Tr:Q9CWT1" FT /protein_id="CAI19118.1" FT /translation="MPLAEDIKGSCFQSGNKRNHEPFIAPERFGNSSVGFGSNSHSQAP FT EKVTLLVDGTRFVVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISATVF FT RTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIRCQDLSALLHELSNDGAHKQ FT FDHYLEELILPIMVGCAKKGERECHIVVLTDEDSVDWDEDHPPPMGEEYSQILYSSKLY FT RFFKYIENRDVAKTVLKERGLKNIRIGIEGYPTCKEKIKRRPGGRSEVIYNYVQRPFIQ FT MSWEKEEGKSRHVDFQCVRSKSLTNLVAAGDDVLEDQEILMHHPPQVDELDRLNAPLSQ FT MASNDFQD" FT mRNA complement(join(36461669..36463691,36464488..36464582, FT 36465557..36465652,36466140..36466263,36467650..36467767, FT 36474360..36474421,36475277..36475379,36483115..36483269, FT 36485494..36485617,36489511..36489594,36492118..36492240, FT 36493368..36493419,36507849..36507984,36514967..36515247)) FT /gene="STK38" FT /locus_tag="RP1-108K11.2-001" FT /product="serine/threonine kinase 38" FT /note="match: cDNAs: Em:BC012085.1" FT CDS complement(join(36463561..36463691,36464488..36464582, FT 36465557..36465652,36466140..36466263,36467650..36467767, FT 36474360..36474421,36475277..36475379,36483115..36483269, FT 36485494..36485617,36489511..36489594,36492118..36492240, FT 36493368..36493419,36507849..36507979)) FT /gene="STK38" FT /locus_tag="RP1-108K11.2-001" FT /standard_name="OTTHUMP00000016293" FT /product="serine/threonine kinase 38" FT /note="match: proteins: Sw:Q15208 Sw:Q91VJ4 Tr:Q9UPD3" FT /protein_id="CAB39180.1" FT /translation="MAMTGSTPCSSMSNHTKERVTMTKVTLENFYSNLIAQHEEREMRQ FT KKLEKVMEEEGLKDEEKRLRRSAHARKETEFLRLKRTRLGLEDFESLKVIGRGAFGEVR FT LVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLY FT LIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS FT KGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFS FT TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKET FT LTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRERPAAISI FT EIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEGLTARGAIP FT SYMKAAK" FT polyA_signal complement(36461682..36461687) FT polyA_site complement(36461671) FT polyA_signal 36458900..36458905 FT misc_feature 36591116..36643378 FT /note="annotated region of clone" FT CDS 36641594..36643047 FT /pseudo FT /locus_tag="RP1-193M11.1-001" FT /product="leucine aminopeptidase pseudogene" FT /note="match: proteins: Sw:O32106 Sw:O67868 Sw:O68822 FT Sw:O84049 Sw:O86436 Sw:P00727 Sw:P27888 Sw:P28838 Sw:P28838 FT Sw:P28839 Sw:P38019 Sw:P68767 Sw:P73971 Sw:Q09735 Sw:Q9S2Q7 FT Tr:Q29571 Tr:Q9V6S5 Tr:Q9V6T4 Tr:Q9V7Q5 Tr:Q9V7Q8 Tr:Q9VSM6 FT Tr:Q9VSM7 Tr:Q9VT96 Tr:Q9Y934" FT misc_feature 36643179 FT /note="Clone_left_end: RP3-431A14" FT misc_feature 36643379..36836641 FT /note="annotated region of clone" FT mRNA join(36644305..36644347,36645565..36645710, FT 36651874..36652288) FT /gene="CDKN1A" FT /locus_tag="RP3-431A14.2-005" FT /product="cyclin-dependent kinase inhibitor 1A (p21, Cip1)" FT /note="match: ESTs: Em:BE252435" FT mRNA join(36646435..36646575,36651874..36652323, FT 36653528..36655116) FT /gene="CDKN1A" FT /locus_tag="RP3-431A14.2-001" FT /product="cyclin-dependent kinase inhibitor 1A (p21, Cip1)" FT /note="match: ESTs: Em:AL542205 Em:AL542973 Em:AL549864 FT Em:BI545096 Em:BI768604 Em:BM451769" FT /note="match: cDNAs: Em:BC001935.1 Em:BC013967.1" FT mRNA join(36646498..36646575,36650444..36650507, FT 36651874..36652323,36653528..36653701) FT /gene="CDKN1A" FT /locus_tag="RP3-431A14.2-002" FT /product="cyclin-dependent kinase inhibitor 1A (p21, Cip1)" FT /note="match: ESTs: Em:BE798351" FT mRNA join(36646503..36646716,36651874..36652275) FT /gene="CDKN1A" FT /locus_tag="RP3-431A14.2-004" FT /product="cyclin-dependent kinase inhibitor 1A (p21, Cip1)" FT /note="match: cDNAs: Em:AW249092 Em:BF219722" FT mRNA join(36646548..36646761,36648251..36648457) FT /gene="CDKN1A" FT /locus_tag="RP3-431A14.2-003" FT /product="cyclin-dependent kinase inhibitor 1A (p21, Cip1)" FT /note="match: cDNAs: Em:AW135122" FT mRNA complement(join(36822603..36823809,36824362..36824430, FT AL122034.29:2853..3007,AL122034.29:5852..6159)) FT /gene="PPIL1" FT /locus_tag="RP3-431A14.1-001" FT /product="peptidylprolyl isomerase (cyclophilin)-like 1" FT /note="match: ESTs: Em:AA570191 Em:AA579237 Em:AL522960 FT Em:AL559725 Em:AV716079 Em:AV760248 Em:BE268289 Em:BE270486 FT Em:BE396634 Em:BE514402 Em:BE514489 Em:BE537293 Em:BE562316 FT Em:BE565937 Em:BE568262 Em:BE908798 Em:BF184561 Em:BG168581 FT Em:BG492753 Em:BG504024 Em:BG611660 Em:BG707327 Em:BG716767 FT Em:BG822807 Em:BG824810 Em:BI117058 Em:BI199841 Em:BI667386 FT Em:BI668156 Em:BI669884 Em:BI819948 Em:BI907647 Em:BI918079 FT Em:BM051881 Em:BM051898 Em:C15927 Em:Z44938" FT /note="match: cDNAs: Em:AF151882.1 Em:AK004331.1 FT Em:AK026636.1 Em:BC003048.1" FT CDS complement(join(36823589..36823809,36824362..36824430, FT AL122034.29:2853..3007,AL122034.29:5852..5907)) FT /gene="PPIL1" FT /locus_tag="RP3-431A14.1-001" FT /standard_name="OTTHUMP00000016310" FT /product="peptidylprolyl isomerase (cyclophilin)-like 1" FT /note="match: proteins: Sw:Q9D0W5 Sw:Q9Y3C6" FT /protein_id="CAI20894.1" FT /translation="MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR FT GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAG FT PDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAY FT PSG" FT CDS join(36651879..36652323,36653528..36653577) FT /gene="CDKN1A" FT /locus_tag="RP3-431A14.2-001" FT /standard_name="OTTHUMP00000016297" FT /product="cyclin-dependent kinase inhibitor 1A (p21, Cip1)" FT /note="match: proteins: Sw:O19002 Sw:P38936 Sw:P38936 FT Sw:P38936" FT /protein_id="CAB06656.1" FT /translation="MSEPAGDVRQNPCGSKACRRLFGPVDSEQLSRDCDALMAGCIQEA FT RERWNFDFVTETPLEGDFAWERVRGLGLPKLYLPTGPRRGRDELGGGRRPGTSPALLQG FT TAEEDHVDLSLSCTLVPRSGEQAEGSPGGPGDSQGRKRRQTSMTDFYHSKRRLIFSKRK FT P" FT polyA_signal 36655086..36655091 FT polyA_site 36655116 FT mRNA join(36690372..36690509,36693614..36693720, FT 36695354..36695468,36696477..>36696578) FT /gene="RAB44" FT /locus_tag="RP3-431A14.3-001" FT /product="RAB44, member RAS oncogene family" FT CDS join(36690372..36690509,36693614..36693720, FT 36695354..36695468,36696477..>36696578) FT /gene="RAB44" FT /locus_tag="RP3-431A14.3-001" FT /standard_name="OTTHUMP00000017920" FT /product="RAB44, member RAS oncogene family" FT /note="match: proteins: Sw:O95716 Sw:P20336 Sw:Q9NRW1" FT /protein_id="CAD92808.1" FT /translation="MAGGGPQANPDYLFHVIFLGDSNVGKTSFLHLLHQNSFATGLTAT FT VLHPSLCVLGVDFRVKTLLVDNKCFVLQLWDTAGQERYHSMTRQLLRKADGVVLMYDIT FT SQESFAHVRYWLDCLQDAGSDGVVILLLGNKMDCEEERQVSVEAGQQLAQ" FT CDS 36704827..36705763 FT /pseudo FT /locus_tag="RP3-431A14.4-001" FT /product="galanin receptor pseudogene" FT /note="match: proteins: Sw:O08726 Sw:O43603 Sw:O88854 FT Tr:Q98U14 Tr:Q9NFV0 Tr:Q9NFV1 Tr:Q9U721" FT polyA_site complement(36708555) FT polyA_signal complement(36708570..36708575) FT mRNA complement(join(36708552..36710263,36711466..36711539, FT 36712045..36712102,36712825..36712927,36713165..36713292, FT 36714173..36714354,36715998..36716044,36724022..36724075, FT 36725062..36725158)) FT /gene="RP3-431A14.5" FT /locus_tag="RP3-431A14.5-002" FT /product="novel copine-like protein" FT /note="match: ESTs: Em:BI226439 Em:BM455558 Em:BM458330" FT /note="match: cDNAs: Em:BC012765.1" FT mRNA complement(join(36713164..36713292,36714173..36714354, FT 36715998..36716044,36720357..36720397,36720811..36720872, FT 36724022..36724075,36725062..36725158)) FT /gene="RP3-431A14.5" FT /locus_tag="RP3-431A14.5-003" FT /product="novel copine-like protein" FT /note="match: cDNAs: Em:BI907324" FT mRNA complement(join(36708555..36710263,36711466..36711539, FT 36712045..36712102,36712825..36712927,36713165..36713292, FT 36714173..36714354,36715998..36716044,36720811..36720872, FT 36724022..36724075,36730694..36730769,36733112..36733153, FT 36742738..36742842,36746631..36746734,36759810..36759873, FT 36762367..36762426,36765942..36766018,36766232..36766271, FT 36767744..36767847,36789890..36789936,36790834..36790874, FT 36807059..36807778)) FT /gene="RP3-431A14.5" FT /locus_tag="RP3-431A14.5-001" FT /product="novel copine-like protein" FT /note="match: ESTs: Em:AA249411 Em:AI550018" FT /note="match: cDNAs: Em:AB046819.1" FT CDS complement(join(36710045..36710263,36711466..36711539, FT 36712045..36712102,36712825..36712927,36713165..36713292, FT 36714173..36714354,36715998..36716044,36720811..36720872, FT 36724022..36724075,36730694..36730769,36733112..36733153, FT 36742738..36742842,36746631..36746734,36759810..36759873, FT 36762367..36762426,36765942..36766018,36766232..36766271, FT 36767744..36767847,36789890..36789936,36790834..36790874, FT 36807059..36807153)) FT /gene="RP3-431A14.5" FT /locus_tag="RP3-431A14.5-001" FT /standard_name="OTTHUMP00000016296" FT /product="novel copine-like protein" FT /note="match: proteins: Sw:Q9HCH3" FT /protein_id="CAD92810.1" FT /translation="MEQPEDMASLSEFDSLAGSIPATKVEITVSCRNLLDKDMFSKSDP FT LCVMYTQGMENKQWREFGRTEVIDNTLNPDFVRKFIVDYFFEEKQNLRFDLYDVDSKSP FT DLSKHDFLGQAFCTLGEIVGSPGSRLEKPLTIGAFSLNSRTGKPMPAVSNGGVPGKKCG FT TIILSAEELSNCRDVATMQFCANKLDKKDFFGKSDPFLVFYRSNEDGTFTICHKTEVMK FT NTLNPVWQTFSIPVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELARGQSQF FT NIYEVVNPKKKMKKKKYVNSGTVTLLSFAVESECTFLDYIKGGTQINFTVAIDFTASNG FT NPSQSTSLHYMSPYQLNAYALALTAVGEIIQHYDSDKMFPALGFGAKLPPDGRVSHEFP FT LNGNQENPSCCGIDGILEAYHRSLRTVQLYGPTNFAPVVTHVARNAAAVQDGSQYSVLL FT IITDGVISDMAQTKEAIVNAAKLPMSIIIVGVGQAEFDAMVELDGDDVRISSRGKLAER FT DIVQFVPFRDYVDRTGNHVLSMARLARDVLAEIPDQLVSYMKAQGIRPRPPPAAPTHSP FT SQSPARTPPASPLHTHI" FT polyA_site 36822607 FT polyA_signal complement(36822624..36822629) FT mRNA complement(join(36822603..36823809,36824362..36824430, FT 36826341..36826411)) FT /gene="PPIL1" FT /locus_tag="RP3-431A14.1-002" FT /product="peptidylprolyl isomerase (cyclophilin)-like 1" FT /note="match: ESTs: Em:BG569851" FT misc_feature 36836642..36969795 FT /note="annotated region of clone" FT misc_feature 36836642..36836763 FT /note="Sequence from overlapping clone RP3-431A14(Z85996). FT Assembly confirmed by restriction digest" FT misc_feature 36838641 FT /note="Clone_right_end: RP3-431A14" FT mRNA join(36839646..36839743,36846784..36846908, FT 36850964..36851128,36867202..36867409,36869997..36870210, FT 36882060..36882211,36882330..36882469,36884221..36884350, FT 36887354..36887477,36891123..36892331) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-001" FT /product="chromosome 6 open reading frame 89" FT /note="match: cDNAs: Em:AK058086.1 Em:BC009380.1" FT mRNA complement(join(Z85996.1:179325..180531, FT Z85996.1:181084..181152,36839494..36839648, FT 36842493..36842800)) FT /gene="PPIL1" FT /locus_tag="RP3-431A14.1-001" FT /product="peptidylprolyl isomerase (cyclophilin)-like 1" FT /note="match: ESTs: Em:AA570191 Em:AA579237 Em:AL522960 FT Em:AL559725 Em:AV716079 Em:AV760248 Em:BE268289 Em:BE270486 FT Em:BE396634 Em:BE514402 Em:BE514489 Em:BE537293 Em:BE562316 FT Em:BE565937 Em:BE568262 Em:BE908798 Em:BF184561 Em:BG168581 FT Em:BG492753 Em:BG504024 Em:BG611660 Em:BG707327 Em:BG716767 FT Em:BG822807 Em:BG824810 Em:BI117058 Em:BI199841 Em:BI667386 FT Em:BI668156 Em:BI669884 Em:BI819948 Em:BI907647 Em:BI918079 FT Em:BM051881 Em:BM051898 Em:C15927 Em:Z44938" FT /note="match: cDNAs: Em:AF151882.1 Em:AK004331.1 FT Em:AK026636.1 Em:BC003048.1" FT CDS complement(join(Z85996.1:180311..180531, FT Z85996.1:181084..181152,36839494..36839648, FT 36842493..36842548)) FT /gene="PPIL1" FT /locus_tag="RP3-431A14.1-001" FT /standard_name="OTTHUMP00000016310" FT /product="peptidylprolyl isomerase (cyclophilin)-like 1" FT /note="match: proteins: Sw:Q9D0W5 Sw:Q9Y3C6" FT /protein_id="CAI23296.1" FT /translation="MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR FT GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAG FT PDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAY FT PSG" FT mRNA join(36853630..36853804,36862280..36862379, FT 36867202..36867409,36869997..36870210,36882060..36882211, FT 36882330..36882469,36884221..>36884284) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-004" FT /product="chromosome 6 open reading frame 89" FT /note="match: ESTs: Em:AL520781 Em:AL530383 Em:AL549353 FT Em:AW732760 Em:BE296727 Em:BF667093 Em:BI226005 Em:BI457776 FT Em:BI462907 Em:BI549342 Em:BI760586 Em:BM051756" FT mRNA join(36853640..36853804,36867202..36867409, FT 36869997..36870210,36882060..36882211,36882330..36882469, FT 36884221..36884350,36887354..36887477,36891123..36891298) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-002" FT /product="chromosome 6 open reading frame 89" FT /note="match: cDNAs: Em:AJ420498.1" FT mRNA join(36853640..36853804,36860542..36860632, FT 36867202..36867409,36869997..36870210,36882060..36882211, FT 36882330..36882469,36884221..36884350,36887354..36887477, FT 36891123..36891298) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-003" FT /product="chromosome 6 open reading frame 89" FT /note="match: ESTs: Em:AA759754 Em:BB846046 Em:BB847703 FT Em:BF538240 Em:BG895132 Em:BG921703 Em:BG968125 FT Em:BI414042" FT /note="match: cDNAs: Em:BC004004.1" FT mRNA join(36853689..36853804,36867202..36867409, FT 36869997..36870210,36882060..36882211,36891218..>36891348) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-005" FT /product="chromosome 6 open reading frame 89" FT /note="match: ESTs: Em:BI602584" FT CDS join(36853803..36853804,36867202..36867409, FT 36869997..36870210,36882060..36882211,36882330..36882469, FT 36884221..36884350,36887354..36887477,36891123..36891217) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-002" FT /standard_name="OTTHUMP00000016312" FT /product="chromosome 6 open reading frame 89" FT /protein_id="CAI23297.1" FT /translation="MDFILEDMDLAANEISIYDKLSETVDLVRQTGHQCGMSEKAIEKF FT IRQLLEKNEPQRPPPQYPLLIVVYKVLATLGLILLTAYFVIQPFSPLAPEPVLSGAHTW FT RSLIHHIRLMSLPIAKKYMSENKGVPLHGGDEDRPFPDFDPWWTNDCEQNESEPIPANC FT TGCAQKHLKVMLLEDAPRKFERLHPLVIKTGKPLLEEEIQHFLCQYPEATEGFSEGFFA FT KWWRCFPERWFPFPYPWRRPLNRSQMLRELFPVFTHLPFPKDASLNKCSFLHPEPVVGS FT KMHKMPDLFIIGSGEAMLQLIPPFQCRRHCQSVAMPIEPGDIGYVDTTHWKVYVIARGV FT QPLVICDGTAFSEL" FT CDS join(36853803..36853804,36867202..36867409, FT 36869997..36870210,36882060..36882211,36891218..>36891348) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-005" FT /standard_name="OTTHUMP00000016314" FT /product="chromosome 6 open reading frame 89" FT /protein_id="CAI23298.1" FT /translation="MDFILEDMDLAANEISIYDKLSETVDLVRQTGHQCGMSEKAIEKF FT IRQLLEKNEPQRPPPQYPLLIVVYKVLATLGLILLTAYFVIQPFSPLAPEPVLSGAHTW FT RSLIHHIRLMSLPIAKKYMSENKGVPLHGGDEDRPFPDFDPWWTNDCEQNESEPIPANC FT TGCAQKHLKVMLLEDAPRKFERLHPLVIKEIELCTGTASRAENQVERGKIKTKTMKLLS FT GGWLLSYLPFACM" FT misc_feature 36853885..36853891 FT /note="Weak data" FT misc_feature 36861296..36861435 FT /note="Sequence confirmed by AC011191 sequenced by WIBR and FT AC073394 sequenced by SDSTDC" FT CDS join(36867221..36867409,36869997..36870210, FT 36882060..36882211,36882330..36882469,36884221..36884350, FT 36887354..36887477,36891123..36891217) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-003" FT /standard_name="OTTHUMP00000016313" FT /product="chromosome 6 open reading frame 89" FT /note="match: proteins: Sw:Q99KU6" FT /protein_id="CAI23299.1" FT /translation="MDLAANEISIYDKLSETVDLVRQTGHQCGMSEKAIEKFIRQLLEK FT NEPQRPPPQYPLLIVVYKVLATLGLILLTAYFVIQPFSPLAPEPVLSGAHTWRSLIHHI FT RLMSLPIAKKYMSENKGVPLHGGDEDRPFPDFDPWWTNDCEQNESEPIPANCTGCAQKH FT LKVMLLEDAPRKFERLHPLVIKTGKPLLEEEIQHFLCQYPEATEGFSEGFFAKWWRCFP FT ERWFPFPYPWRRPLNRSQMLRELFPVFTHLPFPKDASLNKCSFLHPEPVVGSKMHKMPD FT LFIIGSGEAMLQLIPPFQCRRHCQSVAMPIEPGDIGYVDTTHWKVYVIARGVQPLVICD FT GTAFSEL" FT CDS join(36870126..36870210,36882060..36882211, FT 36882330..36882469,36884221..36884350,36887354..36887477, FT 36891123..36891217) FT /gene="C6orf89" FT /locus_tag="RP1-90K10.6-001" FT /standard_name="OTTHUMP00000016311" FT /product="chromosome 6 open reading frame 89" FT /note="match: proteins: Tr:Q96LN2" FT /protein_id="CAI23300.1" FT /translation="MSLPIAKKYMSENKGVPLHGGDEDRPFPDFDPWWTNDCEQNESEP FT IPANCTGCAQKHLKVMLLEDAPRKFERLHPLVIKTGKPLLEEEIQHFLCQYPEATEGFS FT EGFFAKWWRCFPERWFPFPYPWRRPLNRSQMLRELFPVFTHLPFPKDASLNKCSFLHPE FT PVVGSKMHKMPDLFIIGSGEAMLQLIPPFQCRRHCQSVAMPIEPGDIGYVDTTHWKVYV FT IARGVQPLVICDGTAFSEL" FT polyA_signal 36891277..36891282 FT polyA_site 36891296 FT polyA_signal 36892312..36892317 FT polyA_site 36892332 FT misc_feature 36894085 FT /note="Clone_left_end: RP3-405J24" FT CDS 36896355..36896644 FT /pseudo FT /locus_tag="RP1-90K10.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q9N005" FT mRNA join(36907863..36908141,36912252..36912451) FT /locus_tag="RP1-90K10.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI215044 Em:AI806721" FT misc_feature 36916452 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 180bp by restriction digest data" FT misc_feature 36919497 FT /note="Sequence from overlapping clone RP3-405J24 FT (AL160264). Assembly confirmed by restriction digest" FT mRNA join(36922209..36922707,36926921..36927142, FT 36929227..36929336,36929662..36929750,36930711..36931388, FT 36931599..36931738,36932162..36932613) FT /locus_tag="RP1-90K10.5-001" FT /product="novel SCP-like extracellular protein" FT /note="match: ESTs: Em:AA035063 Em:AA309447 Em:AA318394 FT Em:AA354610 Em:AA355188 Em:AW954909 Em:BF074630 Em:BG256552 FT Em:BG536782 Em:BG742796 Em:BI767252 Em:BI818191 Em:BI822132 FT Em:BI909997 Em:C04268 Em:C04744" FT /note="match: cDNAs: Em:AB046537.1 Em:AK004672.1 FT Em:AL050088.1" FT CDS join(36922537..36922707,36926921..36927142, FT 36929227..36929336,36929662..36929750,36930711..36931388, FT 36931599..36931720) FT /locus_tag="RP1-90K10.5-001" FT /standard_name="OTTHUMP00000016309" FT /product="novel SCP-like extracellular protein" FT /note="match: proteins: Tr:Q8TCB8 Tr:Q9ET66 Tr:Q9JJ56" FT /protein_id="CAI23302.1" FT /translation="MHGSCSFLMLLLPLLLLLVATTGPVGALTDEEKRLMVELHNLYRA FT QVSPTASDMLHMRWDEELAAFAKAYARQCVWGHNKERGRRGENLFAITDEGMDVPLAME FT EWHHEREHYNLSAATCSPGQMCGHYTQVVWAKTERIGCGSHFCEKLQGVEETNIELLVC FT NYEPPGNVKGKRPYQEGTPCSQCPSGYHCKNSLCEPIGSPEDAQDLPYLVTEAPSFRAT FT EASDSRKMGTPSSLATGIPAFLVTEVSGSLATKALPAVETQAPTSLATKDPPSMATEAP FT PCVTTEVPSILAAHSLPSLDEEPVTFPKSTHVPIPKSADKVTDKTKVPSRSPENSLDPK FT MSLTGARELLPHAQEEAEAEAELPPSSEVLASVFPAQDKPGELQATLDHTGHTSSKSLP FT NFPNTSATANATGGRALALQSSLPGAEGPDKPSVVSGLNSGPGHVWGPLLGLLLLPPLV FT LAGIF" FT mRNA join(36930766..36930809,36931599..36931738, FT 36932162..36932443) FT /locus_tag="RP1-90K10.5-002" FT /product="novel SCP-like extracellular protein" FT /note="match: ESTs: Em:AA054477" FT polyA_signal 36932587..36932592 FT polyA_site 36932612 FT polyA_site 36935919 FT polyA_signal complement(36935934..36935939) FT mRNA complement(join(36936536..36936750,36937815..36937890, FT 36938182..36938249,36938423..36938692)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-004" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: ESTs: Em:AW390286" FT mRNA complement(join(36937832..36937890,36938182..36938470, FT 36940428..36940452)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-006" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: ESTs: Em:D78915" FT mRNA complement(join(36937242..36937890,36938182..36938249, FT 36938423..36938470,36940479..36940530)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-005" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: ESTs: Em:AA102711 Em:AL545684 Em:BF982929" FT mRNA complement(join(36935917..36936300,36937858..36937890, FT 36938182..36938249,36938423..36938470,36940428..36940572, FT 36943434..36943493,36944975..36945008)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-002" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: ESTs: Em:BE798645" FT mRNA complement(join(<36936688..36936750,36937858..36937890, FT 36938182..36938249,36938423..36938470,36940479..36940572, FT 36943434..36943493,36944274..36944374,36944975..36945026, FT 36945410..>36945449)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-003" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: ESTs: Em:BG328595" FT CDS complement(join(<36936688..36936750,36937858..36937890, FT 36938182..36938249,36938423..36938470,36940479..36940572, FT 36943434..36943493,36944274..36944374,36944975..36945026, FT 36945410..>36945449)) FT /codon_start=3 FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-003" FT /standard_name="OTTHUMP00000016316" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /protein_id="CAI23303.1" FT /translation="AVCVPHVGPPPACHLNALHGPVCGTGGQVQLSCGATIPGSSAAMV FT PHFGVINGKLAHSPRLIMSGVLSSIGKIFKEEGLLGFFVGLIPHLLGDVVFLWGCNLLA FT HFINAYLVDDSFSQALAIRSYTKFVMGIAVSMLTYPFLLVGDLMAVNNCGLQAGLPPYS FT PVASSSEAPACFSAGCHQDHALP" FT mRNA complement(join(36936513..36936727,36937815..36937890, FT 36938182..36938249,36938423..36938470,36940475..36940572, FT 36943434..36943493,36944975..36945026,36945410..36945467, FT 36945854..36945931,36946281..36946387,36949364..36949448, FT 36953629..36953757)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-007" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT CDS complement(join(36936513..36936727,36937815..36937890, FT 36938182..36938249,36938423..36938470,36940475..36940572, FT 36943434..36943493,36944975..36945026,36945410..36945467, FT 36945854..36945931,36946281..36946387,36949364..36949448, FT 36953629..36953757)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-007" FT /standard_name="OTTHUMP00000016317" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: proteins: Tr:Q9Y374" FT /protein_id="CAI23304.1" FT /translation="MDGGSGGLGSGDNAPTTEALFVALGAGVTALSHPLLYVKLLIQVG FT HEPMPPTLGTNVLGRKVLYLPSFFTYAKYIVQVDGKIGLFRGLSPRLMSNALSTVTRGS FT MKKVFPPDEIEQVSNKDDMKTSLKKVVKETSYEMMMQCVSRMLAHPLHVISMRCMVQFV FT GREAKYSGVLSSIGKIFKEEGLLGFFVGLIPHLLGDVVFLWGCNLLAHFINAYLVDDSV FT IQPGPGHPELYQVRDGDCSEHADLPLPASWRPHGCEQLRAASWAPPLLPSVQILDSLLE FT VPECAACFSAGCHQDHALPWSNLNHLKNTVSTWPPWVRPDHLGTPARRLQPNNNQMCSS FT PAGLQFHICHVSVQMWG" FT mRNA complement(join(36935917..36936750,36937815..36937890, FT 36938182..36938249,36938423..36938470,36940479..36940572, FT 36943434..36943493,36944975..36945026,36945410..36945467, FT 36945854..36945931,36946281..36946387,36949364..36949448, FT 36953629..36954074)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-001" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: ESTs: Em:AA130797 Em:AL521084 Em:AL523125 FT Em:AL545684 Em:AL545736 Em:AL550120 Em:AL561426 Em:AL580439 FT Em:BB869568 Em:BE315275 Em:BE617062 Em:BE731085 Em:BE742386 FT Em:BF118685 Em:BF204198 Em:BF231260 Em:BF384357 Em:BF532038 FT Em:BF765773 Em:BG250732 Em:BG328595 Em:BG825920 Em:BI985605 FT Em:BM423948" FT /note="match: cDNAs: Em:AF151822.1 Em:AF176006.3 FT Em:AF176007.2 Em:AK022783.1 Em:BC000702.1 Em:BC006507.1 FT Em:BC009962.1" FT CDS complement(join(36936679..36936750,36937815..36937890, FT 36938182..36938249,36938423..36938470,36940479..36940572, FT 36943434..36943493,36944975..36945026,36945410..36945467, FT 36945854..36945931,36946281..36946387,36949364..36949448, FT 36953629..36953949)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-001" FT /standard_name="OTTHUMP00000016315" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: proteins: Sw:Q791T5 Sw:Q9NZJ7 Sw:Q9NZJ7 FT Tr:Q9PUL9 Tr:Q9Y374" FT /protein_id="CAI23306.1" FT /translation="MGASDPEVAPWARGGAAGMAGAGAGAGARGGAAAGVEARARDPPP FT AHRAHPRHPRPAAQPSARRMDGGSGGLGSGDNAPTTEALFVALGAGVTALSHPLLYVKL FT LIQVGHEPMPPTLGTNVLGRKVLYLPSFFTYAKYIVQVDGKIGLFRGLSPRLMSNALST FT VTRGSMKKVFPPDEIEQVSNKDDMKTSLKKVVKETSYEMMMQCVSRMLAHPLHVISMRC FT MVQFVGREAKYSGVLSSIGKIFKEEGLLGFFVGLIPHLLGDVVFLWGCNLLAHFINAYL FT VDDSFSQALAIRSYTKFVMGIAVSMLTYPFLLVGDLMAVNNCGLQAGLPPYSPVFKSWI FT HCWKYLSVQGQLFRGSSLLFRRVSSGSCFALE" FT mRNA complement(join(36935917..36936750,36937815..36937890, FT 36938182..36938249,36938423..36938470,36940428..36940572, FT 36943434..36943493,36944975..36945026,36945410..36945467, FT 36945854..36945931,36946281..36946387,36949364..36949448, FT 36953629..36954074)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-008" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: ESTs: Em:AL524249 Em:AL527097 Em:AL528592 FT Em:AL533388 Em:AL545052 Em:AL554083 Em:AL582935 Em:AU080797 FT Em:BE226847 Em:BE299829 Em:BE780791 Em:BE884989 Em:BF346674 FT Em:BF688362 Em:BF973295 Em:BF973329 Em:BG001371 Em:BG035331 FT Em:BG422630 Em:BG826792 Em:BI331311 Em:BI861663 Em:BM047597 FT Em:BM452355 Em:W48020" FT /note="match: cDNAs: Em:AF189289.1 Em:AF192558.2 FT Em:AF192559.3 Em:AK009623.1" FT CDS complement(join(36936679..36936750,36937815..36937890, FT 36938182..36938249,36938423..36938470,36940428..36940572, FT 36943434..36943493,36944975..36945026,36945410..36945467, FT 36945854..36945931,36946281..36946387,36949364..36949448, FT 36953629..36953949)) FT /gene="MTCH1" FT /locus_tag="RP1-90K10.1-008" FT /standard_name="OTTHUMP00000016318" FT /product="mitochondrial carrier homolog 1 (C. elegans)" FT /note="match: proteins: Sw:Q791T5 Sw:Q791T5 Sw:Q9NZJ7 FT Sw:Q9NZJ7" FT /protein_id="CAI23305.1" FT /translation="MGASDPEVAPWARGGAAGMAGAGAGAGARGGAAAGVEARARDPPP FT AHRAHPRHPRPAAQPSARRMDGGSGGLGSGDNAPTTEALFVALGAGVTALSHPLLYVKL FT LIQVGHEPMPPTLGTNVLGRKVLYLPSFFTYAKYIVQVDGKIGLFRGLSPRLMSNALST FT VTRGSMKKVFPPDEIEQVSNKDDMKTSLKKVVKETSYEMMMQCVSRMLAHPLHVISMRC FT MVQFVGREAKYSGVLSSIGKIFKEEGLLGFFVGLIPHLLGDVVFLWGCNLLAHFINAYL FT VDDSVSDTPGGLGNDQNPGSQFSQALAIRSYTKFVMGIAVSMLTYPFLLVGDLMAVNNC FT GLQAGLPPYSPVFKSWIHCWKYLSVQGQLFRGSSLLFRRVSSGSCFALE" FT misc_feature 36969795 FT /note="Clone_right_end: RP1-90K10" FT misc_feature 36969796..37059576 FT /note="annotated region of clone" FT mRNA join(36973422..36973661,36976610..36976841, FT 36978749..36978830,36979456..36979630,36981385..36981541, FT 36981738..36981876,36982422..36982480,36982668..36982814, FT 36983544..36983636,36984983..36985078,36988317..36988396, FT 36988485..36988515,36989288..36989380,36990015..36990146, FT 36993568..36993714,36995205..36995351,36995724..36996074) FT /gene="FGD2" FT /locus_tag="RP3-405J24.2-001" FT /product="FYVE, RhoGEF and PH domain containing 2" FT /note="match: ESTs: Em:AA178666 Em:AA447328 Em:AI379193 FT Em:AI524250 Em:AI592281 Em:AW353595 Em:AW357949 Em:BE483615 FT Em:BE570423 Em:BF076041 Em:BF079846 Em:BF162589 Em:BG398458 FT Em:BG686784 Em:BI261399 Em:BI775782 Em:BI852936 Em:BM007617 FT Em:BM257497 Em:BM480457" FT /note="match: cDNAs: Em:AF017368.1 Em:AF017369.1 FT Em:AF017370.1 Em:AF038388.1 Em:AF402611.1 Em:AF402612.1 FT Em:AF402613.1 Em:AK000004.1 Em:AK057294.1 Em:BC011462.1 FT Em:U11690.1 Em:U22325.1" FT CDS join(36973594..36973661,36976610..36976841, FT 36978749..36978830,36979456..36979630,36981385..36981541, FT 36981738..36981876,36982422..36982480,36982668..36982814, FT 36983544..36983636,36984983..36985078,36988317..36988396, FT 36988485..36988515,36989288..36989380,36990015..36990146, FT 36993568..36993714,36995205..36995351,36995724..36995939) FT /gene="FGD2" FT /locus_tag="RP3-405J24.2-001" FT /standard_name="OTTHUMP00000016320" FT /product="FYVE, RhoGEF and PH domain containing 2" FT /note="match: proteins: Sw:O88387 Sw:O88842 Sw:P52734 FT Sw:P98174 Sw:Q8BY35 Tr:O93504 Tr:Q9JIF1 Tr:Q9JIF2 Tr:Q9JIH3 FT Tr:Q9NXY1" FT /protein_id="CAI20471.1" FT /translation="MKGASEEKLASVSNLVTVFENSRTPEAAPRGQRLEDVHHRPECRP FT PESPGPREKTNVGEAVGSEPRTVSRRYLNSLKNKLSSEAWRKSCQPVTLSGSGTQEPEK FT KIVQELLETEQAYVARLHLLDQAMSDLSWRLQVFFQELLKTARSSKAFPEDVVRVIFSN FT ISSIYQFHSQFFLPELQRRLDDWTANPRIGDVIQKLAPFLKMYSEYVKNFERAAELLAT FT WTDKSPLFQEVLTRIQSSEASGSLTLQHHMLEPVQRIPRYELLLKEYIQKLPAQAPDQA FT DAQKALDMIFSAAQHSNAAITEMERLQDLWEVYQRLGLEDDIVDPSNTLLREGPVLKIS FT FRRNDPMERYLFLFNNMLLYCVPRVIQVGAQFQVRTRIDVAGMKMHRNFFNQSSAERHL FT DCFQLSAAANEAAVNSLVRELMDAEFPHSFLVSGKQRTLELQARSQEEMISWMQAFQAA FT IDQIEKRNETFKAAAQGPEGDIQEQELQSEELGLRAPQWVRDKMVTMCMRCQEPFNALT FT RRRHHCRACGYVVCARCSDYRAELKYDDNRPNRVCLHCYAFLTGNVLPEAKEDKRRGIL FT EKGSSATPDQSLMCSFLQLIGDKWGKSGPRGWCVIPRDDPLVLYVYAAPQDMRAHTSIP FT LLGYQVTVGPQGDPRVFQLQQSGQLYTFKAETEELKGRWVKAMERAASGWSPSWPNDGD FT LSD" FT mRNA 37012607..37013177 FT /locus_tag="RP3-405J24.3-001" FT /product="novel protein similar to cytochrome c oxidase FT subunit VIa polypeptide 1 COX6A1" FT /note="match: ESTs: Em:AA843229 Em:AA890433 Em:AI220514 FT Em:AI370268 Em:AV763893 Em:BG567148 Em:BG618222 Em:BG705963 FT Em:BG709333 Em:BM477794" FT /note="match: cDNAs: Em:AF020589.1 Em:AF198089.1 FT Em:BC007723.1 Em:L06465.1 Em:X12553.1 Em:X15341.1" FT CDS 37012636..37012965 FT /locus_tag="RP3-405J24.3-001" FT /standard_name="OTTHUMP00000016319" FT /product="novel protein similar to cytochrome c oxidase FT subunit VIa polypeptide 1 COX6A1" FT /note="match: proteins: Sw:O13082 Sw:P07471 Sw:P10818 FT Sw:P12074 Sw:P13182 Sw:P43023 Sw:P43024 Sw:Q02221 Sw:Q9TTT7 FT Tr:O95101 Tr:Q9IAT5 Tr:Q9UEG9 Tr:Q9W1N3" FT /protein_id="CAI20472.1" FT /translation="MAAVGVFSVSRLLGRSRPQLGRPMSSGAHGEEGSARMWKTLTFFV FT ALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFHNPHVNPLPT FT GYEDE" FT polyA_signal 37013140..37013145 FT polyA_site 37013158 FT CDS join(37059088..37059576,AL356983.33:101..105) FT /pseudo FT /locus_tag="RP3-405J24.1-001" FT /product="Ribosomal protein L12 (RPL12) pseudogene" FT /note="match: proteins: Sw:O50003 Sw:O75000 Sw:P17079 FT Sw:P23358 Sw:P30050 Sw:P35979 Sw:P35979 Sw:P61865 Sw:P61866 FT Tr:Q90YV6 Tr:Q9NFW1 Tr:Q9W1B9" FT misc_feature 37059377 FT /note="Clone_left_end: RP3-441G21" FT misc_feature 37059577..37111399 FT /note="annotated region of clone" FT polyA_signal 37059602..37059607 FT polyA_site 37059625 FT misc_feature 37077774 FT /note="Clone_right_end: RP3-405J24" FT misc_feature 37111200 FT /note="Clone_left_end: RP3-355M6" FT CDS join(AL160264.22:89393..89881,37059577..37059581) FT /pseudo FT /locus_tag="RP3-405J24.1-001" FT /product="Ribosomal protein L12 (RPL12) pseudogene" FT /note="match: proteins: Sw:O50003 Sw:O75000 Sw:P17079 FT Sw:P23358 Sw:P30050 Sw:P35979 Sw:P35979 Sw:P61865 Sw:P61866 FT Tr:Q90YV6 Tr:Q9NFW1 Tr:Q9W1B9" FT misc_feature 37111400..37245208 FT /note="annotated region of clone" FT misc_feature 37114552 FT /note="Clone_left_end: RP11-200O9" FT mRNA join(37137979..37138433,37138549..37138655, FT 37138757..37138807,37138901..37139267,37140772..37140948, FT 37141710..37143202) FT /gene="PIM1" FT /locus_tag="RP3-355M6.1-003" FT /product="pim-1 oncogene" FT /note="match: ESTs: Em:AA108991 Em:AL528149 Em:AL556936 FT Em:AU137820 Em:AU142969 Em:BG744312 Em:BG775125 FT Em:BM465329" FT /note="match: cDNAs: Em:AB073748.1 Em:AF259078.1 FT Em:M16750.1 Em:M24779.1 Em:M54915.1 Em:X63675.1" FT CDS join(37138352..37138433,37138549..37138655, FT 37138757..37138807,37138901..37139267,37140772..37140948, FT 37141710..37141867) FT /gene="PIM1" FT /locus_tag="RP3-355M6.1-003" FT /standard_name="OTTHUMP00000018046" FT /product="pim-1 oncogene" FT /note="match: proteins: Sw:O70444 Sw:P06803 Sw:P11309 FT Sw:P26794 Sw:Q62070 Sw:Q91822 Sw:Q9P1W9 Sw:Q9P1W9 Sw:Q9PU85 FT Sw:Q9YHZ5" FT /protein_id="CAI20316.1" FT /translation="MLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLG FT SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI FT RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV FT LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS FT AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTF FT EEIQNHPWMQDVLLPQETAEIHLHSLSPGPSK" FT mRNA join(37140244..37140570,37140772..37140948, FT 37141710..37142023) FT /gene="PIM1" FT /locus_tag="RP3-355M6.1-004" FT /product="pim-1 oncogene" FT /note="match: ESTs: Em:BI771951 Em:BI837896" FT mRNA join(37140270..37140388,37140772..37140948, FT 37141710..37142088) FT /gene="PIM1" FT /locus_tag="RP3-355M6.1-001" FT /product="pim-1 oncogene" FT /note="match: ESTs: Em:BI907578" FT mRNA join(37140772..37140826,37143046..37143202) FT /gene="PIM1" FT /locus_tag="RP3-355M6.1-002" FT /product="pim-1 oncogene" FT /note="match: ESTs: Em:AW919408 Em:BF286922" FT polyA_signal 37143184..37143189 FT polyA_site 37143203 FT CDS complement(join(37180742..37180772,37186202..37186806)) FT /gene="TMEM217" FT /locus_tag="RP3-355M6.2-001" FT /standard_name="OTTHUMP00000016321" FT /product="transmembrane protein 217" FT /protein_id="CAI20317.1" FT /translation="MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEI FT TPKYRGASNIINNFIICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFY FT ETANVVIQILTNNDFDIKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNII FT SYKRRISTAEILHSRNKRLSISSGFSGSHLESQYFERQRRCSGKTSIK" FT misc_feature 37200990..37201005 FT /note="Sequence from overlapping clones bA200O9(AC022752) FT and dJ441G21 (AL356983). Assembly confirmed by restriction FT digest" FT misc_feature 37202663 FT /note="Clone_right_end: RP3-441G21" FT misc_feature 37208524..37208907 FT /note="Sequence from overlapping clone bA200O9 (AL589667). FT Sequence confirmed by AC022752 sequenced by WIBR. Assembly FT confirmed by restriction digest" FT misc_feature 37209380..37210352 FT /note="Sequence from overlapping clone bA200O9 (AL589667). FT Sequence confirmed by AC022752 sequenced by WIBR. Assembly FT confirmed by restriction digest" FT misc_feature 37217149..37217582 FT /note="Sequence from overlapping clone bA200O9 (AC022752). FT Assembly confirmed by restriction digest data" FT mRNA complement(join(37179956..37180772,37186202..37186817, FT 37225339..37225931)) FT /gene="TMEM217" FT /locus_tag="RP3-355M6.2-001" FT /product="transmembrane protein 217" FT /note="match: ESTs: Em:BE905397 Em:BG285024 Em:BI462473 FT Em:BI464413" FT /note="match: cDNAs: Em:BC026012" FT mRNA complement(join(37180212..37180772,37225344..37225412)) FT /gene="TMEM217" FT /locus_tag="RP3-355M6.2-002" FT /product="transmembrane protein 217" FT /note="match: ESTs: Em:BI826996" FT mRNA join(37225548..37225749,37237370..37237426, FT AL589667.3:1872..2179,AL589667.3:4753..4844, FT complement(AL096712.20:120328..120415), FT complement(AL096712.20:119740..119810), FT complement(AL096712.20:118228..118356), FT complement(AL096712.20:115620..115685), FT complement(AL096712.20:111335..111449), FT complement(AL096712.20:89668..89774), FT complement(AL096712.20:88801..88876), FT complement(AL096712.20:85862..85989), FT complement(AL096712.20:85486..85581), FT complement(AL096712.20:69722..71648)) FT /gene="TBC1D22B" FT /locus_tag="RP4-744I24.2-001" FT /product="TBC1 domain family, member 22B" FT /note="match: ESTs: Em:AA236607 Em:AA432211 Em:AA524572 FT Em:AL521025 Em:AW997389 Em:BB842570 Em:BF461988 Em:BF797844 FT Em:BF850959 Em:BG109248 Em:BG719838 Em:BG823087 Em:BG975908 FT Em:BI002935 Em:BI160792 Em:BI458722 Em:BI560586 Em:BI755922 FT Em:BI757302 Em:BM153710 Em:BM464607 Em:BM465584 FT Em:BM474177" FT /note="match: cDNAs: Em:AB072775.1 Em:AL096779" FT CDS join(37225694..37225749,37237370..37237426, FT AL589667.3:1872..2179,AL589667.3:4753..4844, FT complement(AL096712.20:120328..120415), FT complement(AL096712.20:119740..119810), FT complement(AL096712.20:118228..118356), FT complement(AL096712.20:115620..115685), FT complement(AL096712.20:111335..111449), FT complement(AL096712.20:89668..89774), FT complement(AL096712.20:88801..88876), FT complement(AL096712.20:85862..85989), FT complement(AL096712.20:85486..85581), FT complement(AL096712.20:71520..71648)) FT /gene="TBC1D22B" FT /locus_tag="RP4-744I24.2-001" FT /standard_name="OTTHUMP00000016322" FT /product="TBC1 domain family, member 22B" FT /note="match: proteins: Em:CE09863 Sw:Q08484 Sw:Q8WUA7" FT /protein_id="CAI20318.1" FT /translation="MAAENSKQFWKRSAKLPGSIQPVYGAQHPPLDPRLTKNFIKERSK FT VNTVPLKNKKASSFHEFARNTSDAWDIGDDEEEDFSSPSFQTLNSKVALATAAQVLENH FT SKLRVKPERSQSTTSDVPANYKVIKSSSDAQLSRNSSDTCLRNPLHKQQSLPLRPIIPL FT VARISDQNASGAPPMTVREKTRLEKFRQLLSSQNTDLDELRKCSWPGVPREVRPITWRL FT LSGYLPANTERRKLTLQRKREEYFGFIEQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPL FT FQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLS FT QDMLRSIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYE FT VEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILD FT EEDFQGLLMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFADAPNHYRR" FT misc_feature 37227636..37228351 FT /note="Sequence from overlapping clone bA200O9 (AC022752). FT Assembly confirmed by restriction digest" FT misc_feature 37229029..37229140 FT /note="Sequence from overlapping clone bA200O9 (AC022752). FT Assembly confirmed by restriction digest" FT misc_feature 37245209..37250052 FT /note="annotated region of clone" FT misc_feature 37245308 FT /note="Clone_right_end: RP3-355M6" FT misc_feature 37249953 FT /note="Clone_left_end: RP4-744I24" FT mRNA join(AL353579.17:114249..114450,AL353579.17:126071..126127, FT 37247080..37247387,37249961..37250052, FT complement(AL096712.20:120328..120415), FT complement(AL096712.20:119740..119810), FT complement(AL096712.20:118228..118356), FT complement(AL096712.20:115620..115685), FT complement(AL096712.20:111335..111449), FT complement(AL096712.20:89668..89774), FT complement(AL096712.20:88801..88876), FT complement(AL096712.20:85862..85989), FT complement(AL096712.20:85486..85581), FT complement(AL096712.20:69722..71648)) FT /gene="TBC1D22B" FT /locus_tag="RP4-744I24.2-001" FT /product="TBC1 domain family, member 22B" FT /note="match: ESTs: Em:AA236607 Em:AA432211 Em:AA524572 FT Em:AL521025 Em:AW997389 Em:BB842570 Em:BF461988 Em:BF797844 FT Em:BF850959 Em:BG109248 Em:BG719838 Em:BG823087 Em:BG975908 FT Em:BI002935 Em:BI160792 Em:BI458722 Em:BI560586 Em:BI755922 FT Em:BI757302 Em:BM153710 Em:BM464607 Em:BM465584 FT Em:BM474177" FT /note="match: cDNAs: Em:AB072775.1 Em:AL096779" FT CDS join(AL353579.17:114395..114450,AL353579.17:126071..126127, FT 37247080..37247387,37249961..37250052, FT complement(AL096712.20:120328..120415), FT complement(AL096712.20:119740..119810), FT complement(AL096712.20:118228..118356), FT complement(AL096712.20:115620..115685), FT complement(AL096712.20:111335..111449), FT complement(AL096712.20:89668..89774), FT complement(AL096712.20:88801..88876), FT complement(AL096712.20:85862..85989), FT complement(AL096712.20:85486..85581), FT complement(AL096712.20:71520..71648)) FT /gene="TBC1D22B" FT /locus_tag="RP4-744I24.2-001" FT /standard_name="OTTHUMP00000016322" FT /product="TBC1 domain family, member 22B" FT /note="match: proteins: Em:CE09863 Sw:Q08484 Sw:Q8WUA7" FT /protein_id="CAH71194.1" FT /translation="MAAENSKQFWKRSAKLPGSIQPVYGAQHPPLDPRLTKNFIKERSK FT VNTVPLKNKKASSFHEFARNTSDAWDIGDDEEEDFSSPSFQTLNSKVALATAAQVLENH FT SKLRVKPERSQSTTSDVPANYKVIKSSSDAQLSRNSSDTCLRNPLHKQQSLPLRPIIPL FT VARISDQNASGAPPMTVREKTRLEKFRQLLSSQNTDLDELRKCSWPGVPREVRPITWRL FT LSGYLPANTERRKLTLQRKREEYFGFIEQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPL FT FQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLS FT QDMLRSIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYE FT VEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILD FT EEDFQGLLMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFADAPNHYRR" FT misc_feature complement(37250053..37368469) FT /note="annotated region of clone" FT polyA_signal 37362490..37362495 FT polyA_site 37359018 FT polyA_signal 37358990..37358995 FT mRNA join(37336665..37336994,37339288..37339350, FT 37344702..37344792) FT /gene="RNF8" FT /locus_tag="RP4-744I24.3-002" FT /product="ring finger protein 8" FT /note="match: ESTs: Em:AW880846" FT mRNA join(37321829..37322051,37328222..37328350, FT 37336260..37336994,37339288..37339350,37342396..37342485, FT 37344702..37344809,37348926..37349130,37358518..37362509) FT /gene="RNF8" FT /locus_tag="RP4-744I24.3-001" FT /product="ring finger protein 8" FT CDS join(37321941..37322051,37328222..37328350, FT 37336260..37336994,37339288..37339350,37342396..37342485, FT 37344702..37344809,37348926..37349130,37358518..37358534) FT /gene="RNF8" FT /locus_tag="RP4-744I24.3-001" FT /standard_name="OTTHUMP00000016323" FT /product="ring finger protein 8" FT /protein_id="CAB75689.1" FT /translation="MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFG FT VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGD FT YIQLGVPLENKENAEYEYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAG FT PGAEGPSNLKSKINKVSCESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYP FT GFPKVTEVHHEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGN FT SKKVVQMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQL FT AQALQEHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLEN FT ELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCIN FT KMVNNLSSEVKERRIVLIRERKAKRLF" FT polyA_site 37300746 FT polyA_signal 37300722..37300727 FT mRNA join(AL353579.17:114249..114450,AL353579.17:126071..126127, FT AL589667.3:1872..2179,AL589667.3:4753..4844, FT 37250053..37250140,37250658..37250728,37252112..37252240, FT 37254783..37254848,37259019..37259133,37280694..37280800, FT 37281592..37281667,37284479..37284606,37284887..37284982, FT 37298820..37300746) FT /gene="TBC1D22B" FT /locus_tag="RP4-744I24.2-001" FT /product="TBC1 domain family, member 22B" FT /note="match: ESTs: Em:AA236607 Em:AA432211 Em:AA524572 FT Em:AL521025 Em:AW997389 Em:BB842570 Em:BF461988 Em:BF797844 FT Em:BF850959 Em:BG109248 Em:BG719838 Em:BG823087 Em:BG975908 FT Em:BI002935 Em:BI160792 Em:BI458722 Em:BI560586 Em:BI755922 FT Em:BI757302 Em:BM153710 Em:BM464607 Em:BM465584 FT Em:BM474177" FT /note="match: cDNAs: Em:AB072775.1 Em:AL096779" FT CDS join(AL353579.17:114395..114450,AL353579.17:126071..126127, FT AL589667.3:1872..2179,AL589667.3:4753..4844, FT 37250053..37250140,37250658..37250728,37252112..37252240, FT 37254783..37254848,37259019..37259133,37280694..37280800, FT 37281592..37281667,37284479..37284606,37284887..37284982, FT 37298820..37298948) FT /gene="TBC1D22B" FT /locus_tag="RP4-744I24.2-001" FT /standard_name="OTTHUMP00000016322" FT /product="TBC1 domain family, member 22B" FT /note="match: proteins: Em:CE09863 Sw:Q08484 Sw:Q8WUA7" FT /protein_id="CAI22620.1" FT /translation="MAAENSKQFWKRSAKLPGSIQPVYGAQHPPLDPRLTKNFIKERSK FT VNTVPLKNKKASSFHEFARNTSDAWDIGDDEEEDFSSPSFQTLNSKVALATAAQVLENH FT SKLRVKPERSQSTTSDVPANYKVIKSSSDAQLSRNSSDTCLRNPLHKQQSLPLRPIIPL FT VARISDQNASGAPPMTVREKTRLEKFRQLLSSQNTDLDELRKCSWPGVPREVRPITWRL FT LSGYLPANTERRKLTLQRKREEYFGFIEQYYDSRNEEHHQDTYRQIHIDIPRTNPLIPL FT FQQPLVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEYVEEDVENFDVTNLS FT QDMLRSIEADSFWCMSKLLDGIQDNYTFAQPGIQKKVKALEELVSRIDEQVHNHFRRYE FT VEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQSEPEGFSHFHLYVCAAFLIKWRKEILD FT EEDFQGLLMLLQNLPTIHWGNEEIGLLLAEAYRLKYMFADAPNHYRR" FT misc_feature 37370469 FT /note="Clone_right_end: RP4-744I24" FT misc_feature 37381489..37543939 FT /note="annotated region of clone" FT misc_feature 37381489 FT /note="Clone_left_end: RP1-153P14" FT misc_feature 37387907..37388392 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(37400995..37401153,37403400..37403538, FT 37404085..37404158,37411775..37411859) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-009" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:AL703731" FT mRNA join(37400996..37401153,37403400..37403538, FT 37411775..37411926,37414067..37414225,37418027..37418119, FT 37419582..37419653,37426388..37426586,37427342..37427460, FT 37429325..37429421,37429746..>37429837) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-002" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: cDNAs: Em:AK000348.1" FT mRNA join(37400996..37401153,37403400..37403538, FT 37411775..37411926,37414067..37414225,37418027..37418119, FT 37419582..37419653,37420823..37420917,37421016..37421088, FT 37426388..37426586,37427342..37427460,37429325..37429421, FT 37429746..37429878,37430605..37430784,37438797..37438853, FT 37439623..37439680,37440195..37440263,37441246..37441377, FT 37442300..37442422,37443097..37443188,37443902..37443970, FT 37445368..37445415,37446185..37446297,37446923..37447031, FT 37447789..37449282) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-001" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:AL043565 Em:AL120070 Em:AL518782 FT Em:AL559198 Em:BB646139 Em:BE250682 Em:BE275695 Em:BE314899 FT Em:BE482762 Em:BE734990 Em:BE862136 Em:BE878673 Em:BF451543 FT Em:BG720283 Em:BG753730 Em:BG771914 Em:BG861763 Em:BI091913 FT Em:BI261660 Em:BI692326 Em:BI988306" FT /note="match: cDNAs: Em:AB056750.1 Em:AK005044.1 FT Em:AK025809.1 Em:BC010731.1 Em:D43949.1" FT CDS join(37403406..37403538,37411775..37411926, FT 37414067..37414225,37418027..37418119,37419582..37419653, FT 37426388..37426586,37427342..37427460,37429325..37429421, FT 37429746..>37429837) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-002" FT /standard_name="OTTHUMP00000016325" FT /product="FtsJ methyltransferase domain containing 2" FT /protein_id="CAI19602.1" FT /translation="MKRRTDPECTAPIKKQKKRVAELALSLSSTSDDEPPSSVSHGAKA FT STTSLSGSDSETEGKQHSSDSFDDAFKADSLVEGTSSRYSMYNSVSQKLMAKMGFREGE FT GLGKYSQGRKDIVEASSQKGRRGLGLTLRGFDQELNVDWRDEPEPSACEQVSWFPECTT FT EIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKKPLVKDREAELLYFADVCA FT GPGGFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDGDIT FT RPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVR FT TGGHFICKTFDLFTPFSVGLVYLLYCCFERVC" FT CDS join(37403406..37403538,37411775..37411926, FT 37414067..37414225,37418027..37418119,37419582..37419653, FT 37420823..37420917,37421016..37421088,37426388..37426586, FT 37427342..37427460,37429325..37429421,37429746..37429878, FT 37430605..37430784,37438797..37438853,37439623..37439680, FT 37440195..37440263,37441246..37441377,37442300..37442422, FT 37443097..37443188,37443902..37443970,37445368..37445415, FT 37446185..37446297,37446923..37447031,37447789..37447921) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-001" FT /standard_name="OTTHUMP00000016324" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: proteins: Sw:P41469 Sw:Q96BK5 Tr:Q14670 FT Tr:Q9NAA5 Tr:Q9VPY6 Tr:Q9W4N2" FT /protein_id="CAI19603.1" FT /translation="MKRRTDPECTAPIKKQKKRVAELALSLSSTSDDEPPSSVSHGAKA FT STTSLSGSDSETEGKQHSSDSFDDAFKADSLVEGTSSRYSMYNSVSQKLMAKMGFREGE FT GLGKYSQGRKDIVEASSQKGRRGLGLTLRGFDQELNVDWRDEPEPSACEQVSWFPECTT FT EIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKSVFDVLDGEEMRRARTRAN FT PYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVKDREAELLYFADVCAGPG FT GFSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRPE FT NISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGG FT HFICKTFDLFTPFSVGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRD FT YLFAVNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYMIRSNESHCSLQIKALAKIHAF FT VQDTTLSEPRQAEIRKECLRLWGIPDQARVAPSSSDPKSKFFELIQGTEIDIFSYKPTL FT LTSKTLEKIRPVFDYRCMVSGSEQKFLIGLGKSQIYTWDGRQSDRWIKLDLKTELPRDT FT LLSVEIVHELKGEGKAQRKISAIHILDVLVLNGTDVREQHFNQRIQLAEKFVKAVSKPS FT RPDMNPIRVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDDRHFVPMGLYIVRT FT VNEPWTMGFSKSFKKKFFYNKKTKDSTFDLPADSIAPFHICYYGRLFWEWGDGIRVHDS FT QKPQDQDKLSKEDVLSFIQMHRA" FT mRNA join(37420254..37420363,37420823..37420917, FT 37421016..37421088,37426388..37426465) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-008" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:BB842657" FT mRNA join(37427435..37427460,37429325..>37429848) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-003" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:BF754617" FT mRNA join(37430647..37430784,37438797..37438853, FT 37439623..37439680,37448856..37449048) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-005" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:AA086837" FT mRNA join(<37441344..37441377,37442300..37442422, FT 37443097..37443692,37443902..37443970,37445368..37445415, FT 37446185..37446297,37446923..37446971) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-004" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:AL046807 Em:BE156292 Em:BE302639 FT Em:BE410418 Em:BI918506" FT CDS join(<37443095..37443188,37443902..37443970, FT 37445368..37445415,37446185..37446297,37446923..37447031, FT 37450268..37450304) FT /codon_start=3 FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-007" FT /standard_name="OTTHUMP00000016328" FT /product="FtsJ methyltransferase domain containing 2" FT /protein_id="CAI19605.1" FT /translation="GKAQRKISAIHILDVLVLNGTDVREQHFNQRIQLAEKFVKAVSKP FT SRPDMNPIRVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDDRHFVPMGLYIVR FT TVNEPWTMGFSKSFKKKFFYNKKTKDSTFDLPADSIAPFHLPSLACLSKMD" FT mRNA join(<37443095..37443188,37443902..37443970, FT 37445368..37445415,37446185..37446297,37446923..37447031, FT 37450268..37450603) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-007" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:AI096883" FT mRNA join(<37443121..37443188,37443902..37443970, FT 37445368..37445415,37446185..37446297,37446923..37447002, FT 37448856..>37448922) FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-006" FT /product="FtsJ methyltransferase domain containing 2" FT /note="match: ESTs: Em:AA476998" FT CDS join(<37443121..37443188,37443902..37443970, FT 37445368..37445415,37446185..37446297,37446923..37447002, FT 37448856..>37448922) FT /codon_start=1 FT /gene="FTSJD2" FT /locus_tag="RP1-153P14.6-006" FT /standard_name="OTTHUMP00000016327" FT /product="FtsJ methyltransferase domain containing 2" FT /protein_id="CAI19606.1" FT /translation="AIHILDVLVLNGTDVREQHFNQRIQLAEKFVKAVSKPSRPDMNPI FT RVKEVYRLEEMEKIFVRLEMKIIKGSSGTPKLSYTGRDDRHFVPMGLYIVRTVNEPWTM FT GFSKSFKKKFFYNKKTKDSTFDLPYYPFPSFFFPNRRYNLLLFV" FT polyA_signal 37449262..37449267 FT polyA_site 37449283 FT polyA_site complement(37450714) FT polyA_signal complement(37450728..37450733) FT mRNA complement(join(37450696..37451065,37452586..37452638, FT 37452876..37452970,37467598..37467698)) FT /locus_tag="RP1-153P14.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA534724 Em:AI199608 Em:AI377555 FT Em:AI697063 Em:AI889226 Em:AV710403 Em:AV743943 Em:AW137082 FT Em:AW250853 Em:BE907609 Em:BF526092 Em:BG166392 Em:BG777412 FT Em:N80942" FT /note="match: cDNAs: Em:AF161383.1 Em:AK003900.1 FT Em:BC003515.1 Em:G36751.1" FT CDS complement(join(37450962..37451065,37452586..37452638, FT 37452876..37452970,37467598..37467639)) FT /locus_tag="RP1-153P14.2-001" FT /standard_name="OTTHUMP00000016329" FT /product="novel protein" FT /note="match: proteins: Tr:Q9P0B6" FT /protein_id="CAI19607.1" FT /translation="MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEA FT RRSLEKEKNSLMNKASNYEKELKFLRQENRKNMLLSVAIFILLTLVYAYWTM" FT mRNA complement(join(<37450861..37451065,37452876..37452970, FT 37467598..37467698)) FT /locus_tag="RP1-153P14.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:AV702002" FT CDS complement(join(<37450861..37451065,37452876..37452970, FT 37467598..37467639)) FT /locus_tag="RP1-153P14.2-002" FT /standard_name="OTTHUMP00000016330" FT /product="novel protein" FT /protein_id="CAI19608.1" FT /translation="MTKKKRENLGVALEIDGLEEKLSQCRRDLEAVNSRLHSRELSPEA FT REGTEVSSAREPEEHAALCGHLYPPDARLCLLDHVSLALPHNQHRLPLGPLIRIKQALQ FT ASIGPRCWGV" FT misc_feature 37475705 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 200bp by restriction digest data" FT mRNA complement(join(37511329..37511682,37513523..37513574, FT 37514203..37514531)) FT /locus_tag="RP1-153P14.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA253455 Em:AA465130 Em:AA465725 FT Em:AA760759 Em:AW966934 Em:AW967557" FT mRNA join(37514328..37514531,37514867..37515062, FT 37515377..37515490) FT /locus_tag="RP1-153P14.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA179987 Em:AA254362 Em:AA524885 FT Em:AA983762 Em:AI031959 Em:AV761505 Em:BG496039 FT Em:BG759917" FT /note="match: cDNAs: Em:AF113008.1 Em:BC007507.1 FT Em:BC011323.1 Em:L06498.1" FT mRNA join(37517780..37517928,37518344..37518636) FT /locus_tag="RP1-153P14.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA789234 Em:AW182685" FT polyA_signal 37518609..37518614 FT polyA_site 37518636 FT misc_feature 37543840 FT /note="Clone_left_end: RP3-402N21" FT misc_feature 37543940..37714141 FT /note="annotated region of clone" FT polyA_site complement(37600293) FT polyA_signal complement(37600309..37600314) FT polyA_site complement(37604879) FT polyA_site complement(37604880) FT polyA_signal complement(37604897..37604902) FT mRNA complement(join(37605736..37606089,37606313..37606443, FT 37611585..37611719,37612273..>37612406)) FT /gene="MDGA1" FT /locus_tag="RP3-402N21.1-003" FT /product="MAM domain containing FT glycosylphosphatidylinositol anchor 1" FT /note="match: ESTs: Em:BG031503.1" FT CDS complement(join(37605835..37606089,37606313..37606443, FT 37611585..37611719,37612273..>37612406)) FT /codon_start=2 FT /gene="MDGA1" FT /locus_tag="RP3-402N21.1-003" FT /standard_name="OTTHUMP00000016332" FT /product="MAM domain containing FT glycosylphosphatidylinositol anchor 1" FT /protein_id="CAI20460.1" FT /translation="DEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTDISGTPEG FT YYMFIETSRPRELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNKGAL FT DTHAWSLSGNKGNVWQQAHVPISPSGPFQIIFEGVRGPGYLGDIAIDDVTLKKGECPRK FT QTDPNKGARREGGGGAESGGSCAWRGFLSVEGGCLGLNRGSECLSDGNHVALTV" FT mRNA complement(join(37617647..37618181,37619787..37619926)) FT /gene="MDGA1" FT /locus_tag="RP3-402N21.1-002" FT /product="MAM domain containing FT glycosylphosphatidylinositol anchor 1" FT /note="match: ESTs: Em:BM673820.1" FT mRNA complement(join(37600287..37605235,37605981..37606089, FT 37606313..37606443,37611585..37611719,37612273..37612425, FT 37613709..37613732,37613974..37614151,37614949..37615100, FT 37616758..37617048,37617885..37618181,37619787..37620116, FT 37622050..37622319,37622576..37622708,37623476..37623672, FT 37626021..37626195,37631743..37631882,37664521..37665766)) FT /gene="MDGA1" FT /locus_tag="RP3-402N21.1-001" FT /product="MAM domain containing FT glycosylphosphatidylinositol anchor 1" FT /note="match: ESTs: Em:AI924653.1 Em:AI935159.1 FT Em:AW003899.1 Em:BE864980.1 Em:BF195188.1" FT /note="match: cDNAs: Em:AF478693" FT CDS complement(join(37605144..37605235,37605981..37606089, FT 37606313..37606443,37611585..37611719,37612273..37612425, FT 37613709..37613732,37613974..37614151,37614949..37615100, FT 37616758..37617048,37617885..37618181,37619787..37620116, FT 37622050..37622319,37622576..37622708,37623476..37623672, FT 37626021..37626195,37631743..37631882,37664521..37664587)) FT /gene="MDGA1" FT /locus_tag="RP3-402N21.1-001" FT /standard_name="OTTHUMP00000016331" FT /product="MAM domain containing FT glycosylphosphatidylinositol anchor 1" FT /note="match: proteins: Sw:Q8NFP4" FT /protein_id="CAI20461.1" FT /translation="MEVTCLLLLALIPFHCRGQGVYAPAQAQIVHAGQACVVKEDNISE FT RVYTIREGDTLMLQCLVTGHPRPQVRWTKTAGSASDKFQETSVFNETLRIERIARTQGG FT RYYCKAENGVGVPAIKSIRVDVQYLDEPMLTVHQTVSDVRGNFYQEKTVFLRCTVNSNP FT PARFIWKRGSDTLSHSQDNGVDIYEPLYTQGETKVLKLKNLRPQDYASYTCQVSVRNVC FT GIPDKAITFRLTNTTAPPALKLSVNETLVVNPGENVTVQCLLTGGDPLPQLQWSHGPGP FT LPLGALAQGGTLSIPSVQARDSGYYNCTATNNVGNPAKKTVNLLVRSMKNATFQITPDV FT IKESENIQLGQDLKLSCHVDAVPQEKVTYQWFKNGKPARMSKRLLVTRNDPELPAVTSS FT LELIDLHFSDYGTYLCMASFPGAPVPDLSVEVNISSETVPPTISVPKGRAVVTVREGSP FT AELQCEVRGKPRPPVLWSRVDKEAALLPSGLPLEETPDGKLRLERVSRDMSGTYRCQTA FT RYNGFNVRPREAQVQLNVQSPVPPEVEPSSQDVRQALGRPVLLRCSLLRGSPQRIASAV FT WRFKGQLLPPPPVVPAAAEAPDHAELRLDAVTRDSSGSYECSVSNDVGSAACLFQVSAK FT AYSPEFYFDTPNPTRSHKLSKNYSYVLQWTQREPDAVDPVLNYRLSIRQLNQHNAVVKA FT IPVRRVEKGQLLEYILTDLRVPHSYEVRLTPYTTFGAGDMASRIIHYTEPINSPNLSDN FT TCHFEDEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPTDISGTPEGYYMFIETSR FT PRELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNKGALDTHAWSLSG FT NKGNVWQQAHVPISPSGPFQIIFEGVRGPGYLGDIAIDDVTLKKGECPRKQTDPNKVVV FT MPGSGAPCQSSPQLWGPMAIFLLALQR" FT misc_feature 37714041 FT /note="Clone_right_end: RP3-402N21" FT misc_feature 37781214 FT /note="Clone_left_end: RP3-441A12" FT misc_feature 37781414..37901648 FT /note="annotated region of clone" FT polyA_site complement(37783553) FT mRNA complement(join(37783553..37783657,37786354..37786594, FT 37786922..37786994)) FT /locus_tag="RP3-441A12.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI239898 Em:AW182481" FT mRNA join(37787307..37787792,37897735..37897775, FT AL589655.5:127821..128003,AL589655.5:148620..148685, FT AL133377.10:22108..22278,AL133377.10:57774..60160) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-001" FT /product="zinc finger, AN1-type domain 3" FT /note="match: cDNAs: Em:AK023284.1 Em:X80437.1" FT /note="match: ESTs: Em:AA209122 Em:AA245194 Em:AA493020 FT Em:AA609869 Em:AI688175 Em:AI817165 Em:AL554141 Em:AU133445 FT Em:AU150069 Em:AV052392 Em:AV152430 Em:AW151618 Em:AW303359 FT Em:BE547935 Em:BE771123 Em:BE836906 Em:BG164047 Em:BG166743 FT Em:BG973794 Em:BI519988 Em:BI647047 Em:BM563021" FT CDS join(37787722..37787792,37897735..37897775, FT AL589655.5:127821..128003,AL589655.5:148620..148685, FT AL133377.10:22108..22278,AL133377.10:57774..57928) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-001" FT /standard_name="OTTHUMP00000016333" FT /product="zinc finger, AN1-type domain 3" FT /note="match: proteins: Sw:Q9H8U3" FT /protein_id="CAI20983.1" FT /translation="MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPD FT DDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTD FT TAHVSLITPTKRSCGTADSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQT FT KLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQR FT IGEGCS" FT misc_feature 37827787 FT /note="Clone_right_end: RP3-516D24" FT misc_feature 37827789 FT /note="Clone_right_end: RP3-516D24" FT misc_feature 37829316..37829321 FT /note="Weak data" FT mRNA join(37897715..37897775,AL589655.5:127821..128003, FT AL589655.5:148620..>148685) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-002" FT /product="zinc finger, AN1-type domain 3" FT /note="match: ESTs: Em:AW968580" FT CDS join(37897748..37897775,AL589655.5:127821..128003, FT AL589655.5:148620..>148685) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-002" FT /standard_name="OTTHUMP00000016334" FT /product="zinc finger, AN1-type domain 3" FT /protein_id="CAI20984.1" FT /translation="MNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSI FT TTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT" FT misc_feature 37901548 FT /note="Clone_right_end: RP3-441A12" FT misc_feature 37901649..38062337 FT /note="annotated region of clone" FT mRNA join(AL121574.19:5994..6479,AL121574.19:116422..116462, FT 38029369..38029551,38050168..38050233, FT AL133377.10:22108..22278,AL133377.10:57774..60160) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-001" FT /product="zinc finger, AN1-type domain 3" FT /note="match: ESTs: Em:AA209122 Em:AA245194 Em:AA493020 FT Em:AA609869 Em:AI688175 Em:AI817165 Em:AL554141 Em:AU133445 FT Em:AU150069 Em:AV052392 Em:AV152430 Em:AW151618 Em:AW303359 FT Em:BE547935 Em:BE771123 Em:BE836906 Em:BG164047 Em:BG166743 FT Em:BG973794 Em:BI519988 Em:BI647047 Em:BM563021" FT /note="match: cDNAs: Em:AK023284.1 Em:X80437.1" FT CDS join(AL121574.19:6409..6479,AL121574.19:116422..116462, FT 38029369..38029551,38050168..38050233, FT AL133377.10:22108..22278,AL133377.10:57774..57928) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-001" FT /standard_name="OTTHUMP00000016333" FT /product="zinc finger, AN1-type domain 3" FT /note="match: proteins: Sw:Q9H8U3" FT /protein_id="CAI13989.1" FT /translation="MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPD FT DDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTD FT TAHVSLITPTKRSCGTADSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQT FT KLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQR FT IGEGCS" FT CDS complement(37970608..37971089) FT /pseudo FT /locus_tag="RP11-420A21.1-001" FT /product="pseudogene similar to an integrin Alpha-E FT precursor fragment" FT /note="match: proteins: Sw:P38570 Sw:Q60677 Tr:O88340" FT misc_feature 38010043..38010069 FT /note="Weak data" FT mRNA join(AL121574.19:116402..116462,38029369..38029551, FT 38050168..>38050233) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-002" FT /product="zinc finger, AN1-type domain 3" FT /note="match: ESTs: Em:AW968580" FT CDS join(AL121574.19:116435..116462,38029369..38029551, FT 38050168..>38050233) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-002" FT /standard_name="OTTHUMP00000016334" FT /product="zinc finger, AN1-type domain 3" FT /protein_id="CAI13991.1" FT /translation="MNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSI FT TTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGT" FT mRNA join(38029387..38029551,38030184..38030436) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-003" FT /product="zinc finger, AN1-type domain 3" FT /note="match: ESTs: Em:BE818158" FT misc_feature 38062138 FT /note="Clone_left_end: RP1-295F6" FT misc_feature 38062338..38131900 FT /note="annotated region of clone" FT mRNA join(AL121574.19:5994..6479,AL121574.19:116422..116462, FT AL589655.5:127821..128003,AL589655.5:148620..148685, FT 38084345..38084515,38120011..38122397) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-001" FT /product="zinc finger, AN1-type domain 3" FT /note="match: ESTs: Em:AA209122 Em:AA245194 Em:AA493020 FT Em:AA609869 Em:AI688175 Em:AI817165 Em:AL554141 Em:AU133445 FT Em:AU150069 Em:AV052392 Em:AV152430 Em:AW151618 Em:AW303359 FT Em:BE547935 Em:BE771123 Em:BE836906 Em:BG164047 Em:BG166743 FT Em:BG973794 Em:BI519988 Em:BI647047 Em:BM563021" FT /note="match: cDNAs: Em:AK023284.1 Em:X80437.1" FT CDS join(AL121574.19:6409..6479,AL121574.19:116422..116462, FT AL589655.5:127821..128003,AL589655.5:148620..148685, FT 38084345..38084515,38120011..38120165) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-001" FT /standard_name="OTTHUMP00000016333" FT /product="zinc finger, AN1-type domain 3" FT /note="match: proteins: Sw:Q9H8U3" FT /protein_id="CAI42532.1" FT /translation="MGDAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPD FT DDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTD FT TAHVSLITPTKRSCGTADSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQT FT KLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGREEAIMKMVKLDRKVGRSCQR FT IGEGCS" FT CDS join(<38084348..38084515,38110035..38110069) FT /codon_start=3 FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-004" FT /standard_name="OTTHUMP00000016335" FT /product="zinc finger, AN1-type domain 3" FT /protein_id="CAI42533.1" FT /translation="SQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLEL FT VQQELGSCRCGVSLERDVWHL" FT mRNA join(<38084348..38084515,38110035..38110107) FT /gene="ZFAND3" FT /locus_tag="RP1-295F6.3-004" FT /product="zinc finger, AN1-type domain 3" FT /note="match: ESTs: Em:AW968580" FT polyA_signal 38122381..38122386 FT polyA_site 38122397 FT mRNA complement(join(38130577..38130723,38131289..38131580)) FT /locus_tag="RP1-295F6.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG952876" FT misc_feature 38131701 FT /note="Clone_left_end: RP3-322I12" FT misc_feature complement(38131901..38237200) FT /note="annotated region of clone" FT mRNA join(AL079341.19:18783..18797,AL079341.19:45564..45763, FT AL079341.19:60476..60687,AL079341.19:64270..64633, FT AL079341.19:65757..66021,AL079341.19:78160..78379, FT AL079341.19:80878..80997, FT complement(AL031905.7:20931..21040), FT complement(AL355345.13:18948..19137), FT complement(38224185..38224292), FT complement(38160295..38160373), FT complement(38141310..38142958), FT complement(38139093..38141167)) FT /locus_tag="RP3-322I12.1-004" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:AI650360 Em:AW336280 Em:BB453843 FT Em:BF681515 Em:R51406 Em:U23842" FT /note="match: cDNAs: Em:AB067467.1 Em:AK006275.1 FT Em:AK057507.1" FT CDS complement(join(38142761..38142958,38160295..38160373, FT 38224185..38224292,AL355345.13:18948..19137, FT AL031905.7:20931..>21040)) FT /codon_start=2 FT /locus_tag="RP3-322I12.1-005" FT /standard_name="OTTHUMP00000016338" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /protein_id="CAI42590.1" FT /translation="YIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGLIVPMENVATI FT ADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIGSIRLLLW FT DCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVGTHNTANEV FT FHCVHFECPEQQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSPGSNSRSP FT NRQHQ" FT mRNA complement(join(38142733..38142958,38160295..38160373, FT 38224185..38224292,AL355345.13:18948..19137, FT AL031905.7:20931..>21040)) FT /locus_tag="RP3-322I12.1-005" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: cDNAs: Em:AK057507" FT mRNA complement(join(38141449..38141561,38144864..38145069)) FT /locus_tag="RP3-322I12.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF985705" FT misc_feature complement(38131901) FT /note="Clone_left_end: RP3-322I12" FT misc_feature 38237201..38291929 FT /note="annotated region of clone" FT mRNA join(AL079341.19:18783..18797,AL079341.19:45564..45763, FT AL079341.19:60476..60687,AL079341.19:64270..64633, FT AL079341.19:65757..66021,AL079341.19:78160..78379, FT AL079341.19:80878..80997, FT complement(AL031905.7:20931..21040), FT complement(38256048..38256237),AL033518.14:12909..13016, FT AL033518.14:76828..76906,AL033518.14:94243..95891, FT AL033518.14:96034..98108) FT /locus_tag="RP3-322I12.1-004" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:AI650360 Em:AW336280 Em:BB453843 FT Em:BF681515 Em:R51406 Em:U23842" FT /note="match: cDNAs: Em:AB067467.1 Em:AK006275.1 FT Em:AK057507.1" FT CDS join(complement(AL031905.7:20931..>21040), FT complement(38256048..38256237),AL033518.14:12909..13016, FT AL033518.14:76828..76906,AL033518.14:94243..94440) FT /codon_start=2 FT /locus_tag="RP3-322I12.1-005" FT /standard_name="OTTHUMP00000016338" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /protein_id="CAI43022.1" FT /translation="YIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGLIVPMENVATI FT ADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIGSIRLLLW FT DCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVGTHNTANEV FT FHCVHFECPEQQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSPGSNSRSP FT NRQHQ" FT mRNA join(complement(AL031905.7:20931..>21040), FT complement(38256048..38256237),AL033518.14:12909..13016, FT AL033518.14:76828..76906,AL033518.14:94243..94468) FT /locus_tag="RP3-322I12.1-005" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: cDNAs: Em:AK057507" FT misc_feature 38291730 FT /note="Clone_left_end: RP3-460D19" FT mRNA join(AL079341.19:78327..78379,AL079341.19:80878..80997, FT complement(AL031905.7:20931..21040), FT complement(38256057..38256237)) FT /locus_tag="RP3-322I12.1-002" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:BE077198" FT misc_feature 38291930..38388679 FT /note="annotated region of clone" FT mRNA join(AL079341.19:18783..18797,AL079341.19:45564..45763, FT AL079341.19:60476..60687,AL079341.19:64270..64633, FT AL079341.19:65757..66021,AL079341.19:78160..78379, FT AL079341.19:80878..80997,complement(38312760..38312869), FT complement(AL355345.13:18948..19137), FT AL033518.14:12909..13016,AL033518.14:76828..76906, FT AL033518.14:94243..95891,AL033518.14:96034..98108) FT /locus_tag="RP3-322I12.1-004" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:AI650360 Em:AW336280 Em:BB453843 FT Em:BF681515 Em:R51406 Em:U23842" FT /note="match: cDNAs: Em:AB067467.1 Em:AK006275.1 FT Em:AK057507.1" FT CDS join(complement(38312760..>38312869), FT complement(AL355345.13:18948..19137), FT AL033518.14:12909..13016,AL033518.14:76828..76906, FT AL033518.14:94243..94440) FT /codon_start=2 FT /locus_tag="RP3-322I12.1-005" FT /standard_name="OTTHUMP00000016338" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /protein_id="CAI42804.1" FT /translation="YIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGLIVPMENVATI FT ADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIGSIRLLLW FT DCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVGTHNTANEV FT FHCVHFECPEQQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSPGSNSRSP FT NRQHQ" FT mRNA join(complement(38312760..>38312869), FT complement(AL355345.13:18948..19137), FT AL033518.14:12909..13016,AL033518.14:76828..76906, FT AL033518.14:94243..94468) FT /locus_tag="RP3-322I12.1-005" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: cDNAs: Em:AK057507" FT mRNA join(AL079341.19:78327..78379,AL079341.19:80878..80997, FT complement(38312760..38312869), FT complement(AL355345.13:18957..19137)) FT /locus_tag="RP3-322I12.1-002" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:BE077198" FT misc_feature 38388680..38500156 FT /note="annotated region of clone" FT misc_feature 38390679 FT /note="Clone_right_end: RP3-460D19" FT misc_feature 38403396 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 100bp by restriction digest data" FT mRNA join(38449468..38449562,38449843..38450307) FT /locus_tag="RP11-430C17.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA776694 Em:AA860406" FT misc_feature 38451318..38451508 FT /note="Sequence from clone PCR only" FT misc_feature 38471316..38471770 FT /note="Sequence from clone PCR only" FT misc_feature 38498157 FT /note="Clone_left_end: RP1-319M7" FT misc_feature complement(38500157..38626372) FT /note="annotated region of clone" FT mRNA complement(join(38562044..38562103,38565686..38565897, FT 38607576..38607687)) FT /locus_tag="RP3-322I12.1-003" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:BB860680" FT mRNA join(complement(38607576..38607590), FT complement(38580610..38580809), FT complement(38565686..38565897), FT complement(38561740..38562103), FT complement(38560352..38560616), FT complement(38547994..38548213), FT complement(38545376..38545495), FT complement(AL031905.7:20931..21040), FT complement(AL355345.13:18948..19137), FT AL033518.14:12909..13016,AL033518.14:76828..76906, FT AL033518.14:94243..95891,AL033518.14:96034..98108) FT /locus_tag="RP3-322I12.1-004" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:AI650360 Em:AW336280 Em:BB453843 FT Em:BF681515 Em:R51406 Em:U23842" FT /note="match: cDNAs: Em:AB067467.1 Em:AK006275.1 FT Em:AK057507.1" FT mRNA complement(join(<38545376..38545495,38547994..38548213, FT 38560352..38560616,38561740..38562103,38563546..38563843)) FT /locus_tag="RP3-322I12.1-001" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT CDS complement(join(<38545376..38545495,38547994..38548213, FT 38560352..38560616,38561740..38562084)) FT /locus_tag="RP3-322I12.1-001" FT /standard_name="OTTHUMP00000016336" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /protein_id="CAI20152.1" FT /translation="MRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKEEVLLDF FT LSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDRNAQEV FT LSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKENHAEIMQAVRLPLMS FT LTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEENIATMKYGAQVVKGE FT LKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINHIRILLWDRDSRSYSY FT FIEVSMDELDWVRVIDHSQYLCRSWQKLYFPARVC" FT CDS 38555099..38556305 FT /pseudo FT /locus_tag="RP1-319M7.2-001" FT /product="TRK-fused gene (TFG) pseudogene" FT /note="match: proteins: Sw:Q92734 Sw:Q92734 Tr:Q969I2 FT Tr:Q9D828 Tr:Q9DGF6 Tr:Q9Z1A1" FT mRNA complement(join(AL355345.13:18957..19137, FT AL031905.7:20931..21040,38545376..38545495, FT 38547994..38548046)) FT /locus_tag="RP3-322I12.1-002" FT /product="novel protein (contains KIAA1880 and FLJ32945)" FT /note="match: ESTs: Em:BE077198" FT misc_feature complement(38544182..38544272) FT /note="Single clone region. Sequenced derived by PAC PCR FT only. Assembly confirmed by restriction enzyme digest data" FT misc_feature complement(38500157) FT /note="Clone_left_end: RP1-319M7" FT misc_feature 38626373..38700849 FT /note="annotated region of clone" FT polyA_site complement(38643701) FT polyA_site complement(38643721) FT polyA_signal complement(38643737..38643742) FT mRNA complement(join(38643719..38645159,38649788..38649877, FT 38650584..38650991)) FT /gene="GLO1" FT /locus_tag="RP3-503A6.1-002" FT /product="glyoxalase I" FT /note="match: ESTs: Em:BG943497" FT mRNA complement(join(38643719..38645159,38649788..38649877, FT 38650584..38650651,38652150..38652290,38654668..38654750, FT 38670747..38670917)) FT /gene="GLO1" FT /locus_tag="RP3-503A6.1-001" FT /product="glyoxalase I" FT /note="match: ESTs: Em:AA329656 Em:AA535579 Em:AA599096 FT Em:AA662443 Em:AI022112 Em:AI327352 Em:AL517738 Em:AL518224 FT Em:AL518568 Em:AL534211 Em:AL579211 Em:AU118030 Em:AU125042 FT Em:AU137504 Em:AW129636 Em:AW338276 Em:AW515617 Em:AW615020 FT Em:AW628084 Em:AW674939 Em:AW887073 Em:AW994921 Em:AW995076 FT Em:BE139853 Em:BE244584 Em:BF055032 Em:BF149155 Em:BF309511 FT Em:BF723867 Em:BG164995 Em:BG338054 Em:BG529800 Em:BG696029 FT Em:BG705949 Em:BG768971 Em:BG877619 Em:BI283887 Em:BI457634 FT Em:BI546390 Em:BI552077 Em:BI552906 Em:BI600220 Em:BI667287 FT Em:BM463703 Em:BM466305 Em:BM478087" FT /note="match: cDNAs: Em:AK002386.1 Em:AK003567.1 FT Em:AK005055.1 Em:AK005215.1 Em:BC001741.1 Em:BC011365.1 FT Em:BC015934.1 Em:D13315.1 Em:E04435.1 Em:L07837.1 FT Em:S83285.1" FT CDS complement(join(38645071..38645159,38649788..38649877, FT 38650584..38650651,38652150..38652290,38654668..38654750, FT 38670747..38670830)) FT /gene="GLO1" FT /locus_tag="RP3-503A6.1-001" FT /standard_name="OTTHUMP00000016339" FT /product="glyoxalase I" FT /note="match: proteins: Q4289 Sw:O04885 Sw:O49818 Sw:P16635 FT Sw:Q04760 Sw:Q8H0V3 Tr:Q9V4K3 Tr:Q9ZS21" FT /protein_id="CAI21586.1" FT /translation="MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKS FT LDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHN FT WGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAF FT IQDPDGYWIEILNPNKMATLM" FT mRNA join(38681827..38682074,38682842..38682993) FT /locus_tag="RP3-503A6.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA412130" FT CDS join(<38690622..38690975,38691113..38691247, FT 38697678..38697762,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,AL353700.14:3027..3145, FT AL353700.14:4893..5095,AL353700.14:25167..25282) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /standard_name="OTTHUMP00000017873" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91V63 Tr:Q91XP9" FT /protein_id="CAI21587.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQVCDKRLLLLQHY FT C" FT mRNA join(<38690622..38690975,38691113..38691247, FT 38697678..38697762,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,AL353700.14:3027..3145, FT AL353700.14:4893..5095,AL353700.14:25167..25655) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA144622 Em:AA144987 Em:AA867753 FT Em:AF012380 Em:AI115336 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:BB616572 Em:BM021539 Em:C94838" FT /note="match: cDNAs: Em:AF356521 Em:AF356523 Em:AF363577" FT mRNA join(<38690622..38690975,38691113..38691247, FT 38697678..38697762,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,AL353700.14:3027..3145, FT AL353700.14:4893..5095,AL353700.14:25167..25240, FT AL353700.14:27236..27388,AL353700.14:27949..28104, FT AL353700.14:35921..36037,AL353700.14:37781..37882, FT AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114981..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144987 FT Em:AA447518 Em:AA867753 Em:AF012381 Em:AI115336 Em:AI121650 FT Em:AI269674 Em:AI327324 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:AI805281 Em:AL042262 Em:AL042677 Em:AV274650 FT Em:AW503176 Em:BB616572 Em:BB807691 Em:BE850216 Em:BI343679 FT Em:BI347037 Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356520 Em:AF356522" FT CDS join(<38690622..38690975,38691113..38691247, FT 38697678..38697762,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,AL353700.14:3027..3145, FT AL353700.14:4893..5095,AL353700.14:25167..25240, FT AL353700.14:27236..27388,AL353700.14:27949..28104, FT AL353700.14:35921..36037,AL353700.14:37781..37882, FT AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:115108..115395)) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /standard_name="OTTHUMP00000017872" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91XP8 Tr:Q91XQ0" FT /protein_id="CAI21588.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQGGWVLLQNCHLG FT LEFMEELLETLITTEASDDSFRVWITTEPHDRFPITLLQTSLKFTNEPPQGVRAGLKRT FT FAGINQDLLDISNLPMWKPMLYTVAFLHSTVQERRKFGPLGWNIPYEFNSADFSASVQF FT IQNHLDECDIKKGVSWNTVRYMIGEVQYGGRVTDDFDKRLLNCFARVWFSEKMFEPSFC FT FYTGYKIPLCKTLDQYFEYIQSLPSLDNPEVFGLHPNADITYQSNTASAVLETITNIQP FT KESGGGVGETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRM FT QRVISILRSSLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT FT ELLERNAQFSTWIFEGRPNVFWMTGFFNPQGFLTAMRQEVTRAHKGWALDTVTIHNEVL FT RQTKEEITSPPGEGVYIYGLYMDGAAWDRRNGKLMESTPKVLFTQLPVLHIFAINSTAP FT KDPKLYVCPIYKKPRRTDLTFITVVYLRTVLSPDHWILRGVALLCDIK" FT mRNA join(38690898..38690975,38691113..38691247, FT AL035555.11:1501..1652,AL035555.11:4094..4283, FT AL035555.11:4836..4999,AL035555.11:8738..8914, FT AL035555.11:17503..17616,AL035555.11:22999..23106, FT AL035555.11:28729..28830,AL035555.11:37440..37586, FT AL035555.11:42781..42978,AL035555.11:45415..45491, FT AL035555.11:46993..47092,AL035555.11:48281..48400, FT AL035555.11:50031..50166,AL035555.11:53792..53979, FT AL035555.11:56830..56910,AL035555.11:57316..57432, FT AL035555.11:58582..58701,AL035555.11:70206..70338, FT AL035555.11:72508..72623,AL035555.11:74637..74743, FT AL035555.11:81081..81156,AL035555.11:82495..82684, FT AL035555.11:89865..90061,AL035555.11:90589..90715, FT AL035555.11:93183..93418,AL035555.11:95211..95315, FT AL035555.11:99349..99462,AL035555.11:101606..101668, FT AL035555.11:104969..105069,AL035555.11:109395..109532, FT AL035555.11:109690..109930,AL035555.11:112601..112800, FT AL035555.11:115675..115828,AL035555.11:117278..117441, FT AL035555.11:118599..118701,AL035555.11:119721..119825, FT AL035555.11:120213..120374,AL035555.11:124545..124769, FT AL035555.11:127484..127656,AL035555.11:129307..129485, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114975..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144622 FT Em:AA144987 Em:AA447518 Em:AA867753 Em:AF012380 Em:AF012381 FT Em:AI115336 Em:AI121650 Em:AI269674 Em:AI326136 Em:AI327324 FT Em:AI386463 Em:AI429155 Em:AI509627 Em:AI595507 Em:AI805281 FT Em:AL042262 Em:AL042677 Em:AV274650 Em:AW503176 Em:BB616572 FT Em:BB807691 Em:BE850216 Em:BI343679 Em:BI347037 Em:BM021539 FT Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356519" FT misc_feature 38700650 FT /note="Clone_left_end: RP1-217P22" FT misc_feature 38700850..38831545 FT /note="annotated region of clone" FT CDS join(38702291..38702401,38704843..38705032, FT 38705585..38705748,38709487..38709663,38718252..38718365, FT 38723748..38723855,38729478..38729579,38738189..38738335, FT 38743530..38743727,38746164..38746240,38747742..38747841, FT 38749030..38749149,38750780..38750915,38754541..38754728, FT 38757579..38757659,38758065..38758181,38759331..38759450, FT 38770955..38771087,38773257..38773372,38775386..38775492, FT 38781830..38781905,38783244..38783433,38790614..38790810, FT 38791338..38791464,38793932..38794167,38795960..38796064, FT 38800098..38800211,38802355..38802417,38805718..38805818, FT 38810144..38810281,38810439..38810679,38813350..38813549, FT 38816424..38816577,38818027..38818190,38819348..38819450, FT 38820470..38820574,38820962..38821123,38825294..38825518, FT 38828233..38828405,38830056..38830234, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:115108..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /standard_name="OTTHUMP00000017871" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Sw:P23098 Sw:P39057 Sw:Q39565 FT Sw:Q39575 Sw:Q8TE73 Sw:Q8VHE6 Sw:Q9SMH3 Tr:O15064 Tr:O43326 FT Tr:O76506 Tr:O77075 Tr:Q27803 Tr:Q94709 Tr:Q96JB1 Tr:Q99MH8 FT Tr:Q9GPN7 Tr:Q9VH97" FT /protein_id="CAI19819.1" FT /translation="MMKLYIDNAAPDKLKGLCIFFVRCRNDVAINVKTIQEEALFTVLD FT ASKGLLNGIRDMLANIFLPAVLATNNWGALNQSKQGESEKHIFTETINRYLSFLDGARI FT SIEGTVKLKTIDNVNFSKLHTFEEVTAAASNSETVHQLEEVLMVWYKQIEQVLIESEQM FT RKEAGDSGPLTELEHWKRMSAKFNYIIEQIKGPSCKAVINVLNVAHSKLLKNWRDLDAR FT ITDTANESKDNVRYLYTLEKVCQPLYNHDLVSMAHGIQNLINAIRMIHGVSRYYNTSER FT MTSLFIKVTNQMVTACKAYITDGGLNHVWDQETPVVLKKIQDCIFLFKEYQASFHKTRK FT LISESSGEKSFEVSEMYIFGKFEAFCKRLEKITEMITVVQTYSTLSNSTIEGIDIMAIK FT FRNIYQGVKKKQYDILDPRRTEFDTDFLDFMTKINGLEVQIQAFMNSSFGKILSSQQAL FT QLLQRFQKLNIPCLGLEINHTIERILQYYVAELDATKKLYHSQKDDPPLARNMPPIAGK FT ILWVRQLYRRISEPINYFFKNSDILSSPDGKAVIRQYNKISYVLVEFEVVYHTAWIREI FT SQLHYALQATLFVRHPETGKLLVNFDPKILEVVRETKCMIKMKLDVPEQAKRLLKLESK FT LKADKLYLQGLLQYYDELCQEVPSVFVNLMTPKMKKVESVLRQGLTVLTWSSLTLESFF FT QEVELVLDMFNQLLKKISDLCEMHIDTVLKEIAKTVLISLPESGATKVEDMLTLNETYT FT KEWADILNHKSKHVEEAVRELISIFEQIYEVKYTGKVGKQSEQRKHVVFGSETGEGENN FT DYEANIVNEFDTHDKEDEFKKECKEVFAFFSHQLLDSLQKATRLSLDTMKRRIFVASLY FT GRKQSEDIISFIKSEVHLAIPNVVMIPSLDDIQQAINRMIQLTLEVSRGVAHWGQQQIR FT PIKSVIPSPTTTDVTHQNTGKLLKKEERSFEEAIPARKLKNFYPGVAEHKDISKLVLLL FT SSSVNSLRKAAHEALQDFQKYKTLWTEDRDVKVKEFLANNPSLTEIRSEILHYATFEQE FT IDELKPIIVVGALELHTEPMKLALSIEAKAWKMLLCRYLNEEYKKKMSYMIAFINEYLK FT KLSRPIRDLDDVRFAMEALSCIRDNEIQMDMTLGPIEEAYAILNRFEVEVTKEESEAVD FT TLRYSFNKLQSKAVSVQEDLVQVQPKFKSNLLESVEVFREDVINFAEAYELEGPMVPNI FT PPQEASNRLQIFQASFDDLWRKFVTYSSGEQLFGLPVTDYEVLHKTRKELNLLQKLYGL FT YDTVMSSISGYYEILWGDVDIEKINAELLEFQNRCRKLPKGLKDWQAFLDLKKRIDDFS FT ESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNIMEAPLLKHKDDIEDICI FT SAIKEKDIEAKLTQVIENWTNQNLSFAAFKGKGELLLKGTESGEIITLMEDSLMVLGSL FT LSNRYNAPFKKNIQNWVYKLSTSSDIIEEWLVVQNLWVYLEAVFVGGDIAKQLPQEAKR FT FQNIDKSWIKIMQRAHENPNVINCCVGDETMGQLLPHLHEQLEVCQKSLTGYLEKKRLL FT FPRFFFVSDPVLLEILGQASDSHTIQPHLPAVSDNINEVTFHAKDYDRIMAVISREGEK FT IVLDNSVMAKGPVEIWLLDLLKMQMSSLHNIIRSAFYQISDSGFQLLPFLSHFPAQVGL FT LGIQMLWTHDSEEALRNAKDDRKIMQVTNQKFLDILNTLISQTTHDLSKFDRVKFETLI FT TIHVHQRDIFDDLVKMHIKSPTDFEWLKQSRFYFKEDLDQTVVSITDVDFIYQNEFLGC FT TDRLVITPLTDRCYITLAQALGMNMGGAPAGPAGTGKTETTKDMGRCLGKYVVVFNCSD FT QMDFRGLGRIFKGLAQSGSWGCFDEFNRIELPVLSVAAQQIYIVLTARKERKKQFIFSD FT GDCVDLNPEFGIFLTMNPGYAGRQELPENLKIQFRTVAMMVPDRQIIMRVKLASCGFLE FT NVILAQKFYVLYKLCEEQLTKQVHYDFGLRNILSVLRTLGSQKRARPEDSELSIVMRGL FT RDMNLSKLVDEDEPLFLSLINDLFPGLQLDSNTYAELQNAVAHQVQIEGLINHPPWNLK FT LVQLYETSLVRHGLMTLGPSGSGKTTVITILMKAQTECGRPHREMRMNPKAITAPQMFG FT RLDTATNDWTDGIFSTLWRKTLKAKKGENIFLILDGPVDAIWIENLNSVLDDNKTLTLA FT NGDRIPMAPSCKLLFEVHNIENASPATVSRMGMVYISSSALSWRPILQAWLKKRTAQEA FT AVFLTLYEKVFEDTYTYMKLNLNPKMQLLECNYIVQSLNLLEGLIPSKEEGGVSCVEHL FT HKLFVFGLMWSLGALLELESREKLEAFLRQHESKLDLPEIPKGSNQTMYEFYVTDYGDW FT EHWNKKLQPYYYPTDSIPEYSSILVPNVDNIRTNFLIDTIAKQHKAVLLTGEQGTAKTV FT MVKAYLKKYDPEVQLSKSLNFSSATEPMMFQRTIESYVDKRIGSTYGPPGGRKMTVFID FT DINMPVINEWGDQITNEIVRQMMEMEGMYSLDKPGDFTTIVDVQLIAAMIHPGGGRNDI FT PQRLKRQFTVFNCTLPSNASIDKIFGIIGCGYFDPCRSFKPQICEMIVNLVSVGRVLWQ FT WTKVKMLPTPSKFHYIFNLRDLSRIWQGMLTIKAEECASIPTLLSLFKHECSRVIADRF FT ITPEDEQWFNAHLTRAVEENIGSDAASCILPEPYFVDFLREMPEPTGDEPEDSVFEVPK FT IYELMPSFDFLAEKLQFYQRQFNEIIRGTSLDLVFFKDAMTHLIKISRIIRTSCGNALL FT VGVGGSGKQSLSRLASFIAGYQIFQITLTRSYNVTNLTDDLKALYKVAGADGKGITFIF FT TDSEIKDEAFLEYLNNLLSSGEISNLFARDEMDEITQGLISVMKRELPRHPPTFDNLYE FT YFISRSRKNLHVVLCFSPVGEKFRARSLKFPGLISGCTMDWFSRWPREALIAVASYFLS FT DYNIVCSSEIKRQVVETMGLFHDMVSESCESYFQRYRRRAHVTPKSYLSFINGYKNIYA FT EKVKFINEQAERMNIGLDKLMEASESVAKLSQDLAVKEKELAVASIKADEVLAEVTVSA FT QASAKIKNEVQEVKDKAQKIVDEIDSEKVKAESKLEAAKPALEEAEAALNTIKPNDIAT FT VRKLAKPPHLIMRIMDCVLLLFQKKIDPVTMDPEKSCCKPSWGESLKLMSATGFLWSLQ FT QFPKDTINEETVELLQPYFNMDDYTFESAKKVCGNVAGLLSWTLAMAIFYGINREVLPL FT KANLAKQEGRLAVANAELGKAQALLDEKQAELDKVQAKFDAAMNEKMDLLNDADTCRKK FT MQAASTLIDGLSGEKIRWTQQSKEFKAQINRLVGDILLCTGFLSYLGPFNQIFRNYLLK FT DQWEMELRARKIPFTENLNLISMLVDPPTIGEWGLQGLPGDDLSIQNGIIVTKATRYPL FT LIDPQTQGKTWIKSKEKENDLQVTSLNHKYFRTHLEDSLSLGRPLLIEDIHEELDPALD FT NVLEKNFIKSGTTFKVKVGDKECDIMDTFKLYITTKLPNPAFTPEINAKTSVIDFTVTM FT KGLENQLLRRVILTEKQELEAERVKLLEDVTFNKRKMKELEDNLLYKLSATKGSLVDDE FT SLIGVLRTTKQTAAEVSEKLHVAAETEIKINAAQEEFRPAATRGSILYFLITEMSMVNI FT MYQTSLAQFLKLFDQSMARSEKSPLPQKRITNIIEYLTYEVFTYSVRGLYENHKFLFVL FT LMTLKIDLQRGTVKHREFQALIKGGAALDLKACPPKPYRWILDMTWLNLVELSKLPQFA FT EIMNQISRNEKGWKSWFDKDAPEEEIIPDGYNDSLDTCHKLLLIRSWCPDRTVFQARKY FT IADSLEEKYTEPVILNLEKTWEESDTRTPLICFLSMGSDPTNQIDALAKKLKLECRTIS FT MGQGQEVHARKLIQMSMQQGGWVLLQNCHLGLEFMEELLETLITTEASDDSFRVWITTE FT PHDRFPITLLQTSLKFTNEPPQGVRAGLKRTFAGINQDLLDISNLPMWKPMLYTVAFLH FT STVQERRKFGPLGWNIPYEFNSADFSASVQFIQNHLDECDIKKGVSWNTVRYMIGEVQY FT GGRVTDDFDKRLLNCFARVWFSEKMFEPSFCFYTGYKIPLCKTLDQYFEYIQSLPSLDN FT PEVFGLHPNADITYQSNTASAVLETITNIQPKESGGGVGETREAIVYRLSEDMLSKLPP FT DYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRSSLSDLKLAIEGTIIMSENL FT RDALDNMYDARIPQLWKRVSWDSSTLGFWFTELLERNAQFSTWIFEGRPNVFWMTGFFN FT PQGFLTAMRQEVTRAHKGWALDTVTIHNEVLRQTKEEITSPPGEGVYIYGLYMDGAAWD FT RRNGKLMESTPKVLFTQLPVLHIFAINSTAPKDPKLYVCPIYKKPRRTDLTFITVVYLR FT TVLSPDHWILRGVALLCDIK" FT CDS 38730681..38732470 FT /pseudo FT /locus_tag="RP1-217P22.2-001" FT /product="zuotin related factor-1 (ZRF1) pseudogene" FT /note="match: proteins: Sw:P32527 Sw:P54103 Sw:Q99543 FT Sw:Q9Y7I8 Sw:Q9Y7I8 Tr:Q61866 Tr:Q94216 Tr:Q9P3Q8 Tr:Q9VP77 FT Tr:Q9VP77 Tr:Q9WVG4" FT CDS join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,38702250..38702401, FT 38704843..38705032,38705585..38705748,38709487..38709663, FT 38718252..38718365,38723748..38723855,38729478..38729579, FT 38738189..38738335,38743530..38743727,38746164..38746240, FT 38747742..38747841,38749030..38749149,38750780..38750915, FT 38754541..38754728,38757579..38757659,38758065..38758181, FT 38759331..38759450,38770955..38771087,38773257..38773372, FT 38775386..38775492,38781830..38781905,38783244..38783433, FT 38790614..38790810,38791338..38791464,38793932..38794167, FT 38795960..38796064,38800098..38800211,38802355..38802417, FT 38805718..38805818,38810144..38810281,38810439..38810679, FT 38813350..38813549,38816424..38816577,38818027..38818190, FT 38819348..38819450,38820470..38820574,38820962..38821123, FT 38825294..38825518,38828233..38828405,38830056..38830234, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25282) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /standard_name="OTTHUMP00000017873" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91V63 Tr:Q91XP9" FT /protein_id="CAI19821.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQVCDKRLLLLQHY FT C" FT mRNA join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,38702250..38702401, FT 38704843..38705032,38705585..38705748,38709487..38709663, FT 38718252..38718365,38723748..38723855,38729478..38729579, FT 38738189..38738335,38743530..38743727,38746164..38746240, FT 38747742..38747841,38749030..38749149,38750780..38750915, FT 38754541..38754728,38757579..38757659,38758065..38758181, FT 38759331..38759450,38770955..38771087,38773257..38773372, FT 38775386..38775492,38781830..38781905,38783244..38783433, FT 38790614..38790810,38791338..38791464,38793932..38794167, FT 38795960..38796064,38800098..38800211,38802355..38802417, FT 38805718..38805818,38810144..38810281,38810439..38810679, FT 38813350..38813549,38816424..38816577,38818027..38818190, FT 38819348..38819450,38820470..38820574,38820962..38821123, FT 38825294..38825518,38828233..38828405,38830056..38830234, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25655) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: cDNAs: Em:AF356521 Em:AF356523 Em:AF363577" FT /note="match: ESTs: Em:AA144622 Em:AA144987 Em:AA867753 FT Em:AF012380 Em:AI115336 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:BB616572 Em:BM021539 Em:C94838" FT mRNA join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,38702250..38702401, FT 38704843..38705032,38705585..38705748,38709487..38709663, FT 38718252..38718365,38723748..38723855,38729478..38729579, FT 38738189..38738335,38743530..38743727,38746164..38746240, FT 38747742..38747841,38749030..38749149,38750780..38750915, FT 38754541..38754728,38757579..38757659,38758065..38758181, FT 38759331..38759450,38770955..38771087,38773257..38773372, FT 38775386..38775492,38781830..38781905,38783244..38783433, FT 38790614..38790810,38791338..38791464,38793932..38794167, FT 38795960..38796064,38800098..38800211,38802355..38802417, FT 38805718..38805818,38810144..38810281,38810439..38810679, FT 38813350..38813549,38816424..38816577,38818027..38818190, FT 38819348..38819450,38820470..38820574,38820962..38821123, FT 38825294..38825518,38828233..38828405,38830056..38830234, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114981..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: cDNAs: Em:AF356520 Em:AF356522" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144987 FT Em:AA447518 Em:AA867753 Em:AF012381 Em:AI115336 Em:AI121650 FT Em:AI269674 Em:AI327324 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:AI805281 Em:AL042262 Em:AL042677 Em:AV274650 FT Em:AW503176 Em:BB616572 Em:BB807691 Em:BE850216 Em:BI343679 FT Em:BI347037 Em:C94838 Em:D77466" FT CDS join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,38702250..38702401, FT 38704843..38705032,38705585..38705748,38709487..38709663, FT 38718252..38718365,38723748..38723855,38729478..38729579, FT 38738189..38738335,38743530..38743727,38746164..38746240, FT 38747742..38747841,38749030..38749149,38750780..38750915, FT 38754541..38754728,38757579..38757659,38758065..38758181, FT 38759331..38759450,38770955..38771087,38773257..38773372, FT 38775386..38775492,38781830..38781905,38783244..38783433, FT 38790614..38790810,38791338..38791464,38793932..38794167, FT 38795960..38796064,38800098..38800211,38802355..38802417, FT 38805718..38805818,38810144..38810281,38810439..38810679, FT 38813350..38813549,38816424..38816577,38818027..38818190, FT 38819348..38819450,38820470..38820574,38820962..38821123, FT 38825294..38825518,38828233..38828405,38830056..38830234, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:115108..115395)) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /standard_name="OTTHUMP00000017872" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91XP8 Tr:Q91XQ0" FT /protein_id="CAI19822.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQGGWVLLQNCHLG FT LEFMEELLETLITTEASDDSFRVWITTEPHDRFPITLLQTSLKFTNEPPQGVRAGLKRT FT FAGINQDLLDISNLPMWKPMLYTVAFLHSTVQERRKFGPLGWNIPYEFNSADFSASVQF FT IQNHLDECDIKKGVSWNTVRYMIGEVQYGGRVTDDFDKRLLNCFARVWFSEKMFEPSFC FT FYTGYKIPLCKTLDQYFEYIQSLPSLDNPEVFGLHPNADITYQSNTASAVLETITNIQP FT KESGGGVGETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRM FT QRVISILRSSLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT FT ELLERNAQFSTWIFEGRPNVFWMTGFFNPQGFLTAMRQEVTRAHKGWALDTVTIHNEVL FT RQTKEEITSPPGEGVYIYGLYMDGAAWDRRNGKLMESTPKVLFTQLPVLHIFAINSTAP FT KDPKLYVCPIYKKPRRTDLTFITVVYLRTVLSPDHWILRGVALLCDIK" FT mRNA join(AL391415.12:64626..64703,AL391415.12:64841..64975, FT 38702250..38702401,38704843..38705032,38705585..38705748, FT 38709487..38709663,38718252..38718365,38723748..38723855, FT 38729478..38729579,38738189..38738335,38743530..38743727, FT 38746164..38746240,38747742..38747841,38749030..38749149, FT 38750780..38750915,38754541..38754728,38757579..38757659, FT 38758065..38758181,38759331..38759450,38770955..38771087, FT 38773257..38773372,38775386..38775492,38781830..38781905, FT 38783244..38783433,38790614..38790810,38791338..38791464, FT 38793932..38794167,38795960..38796064,38800098..38800211, FT 38802355..38802417,38805718..38805818,38810144..38810281, FT 38810439..38810679,38813350..38813549,38816424..38816577, FT 38818027..38818190,38819348..38819450,38820470..38820574, FT 38820962..38821123,38825294..38825518,38828233..38828405, FT 38830056..38830234,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,AL353700.14:3027..3145, FT AL353700.14:4893..5095,AL353700.14:25167..25240, FT AL353700.14:27236..27388,AL353700.14:27949..28104, FT AL353700.14:35921..36037,AL353700.14:37781..37882, FT AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114975..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: cDNAs: Em:AF356519" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144622 FT Em:AA144987 Em:AA447518 Em:AA867753 Em:AF012380 Em:AF012381 FT Em:AI115336 Em:AI121650 Em:AI269674 Em:AI326136 Em:AI327324 FT Em:AI386463 Em:AI429155 Em:AI509627 Em:AI595507 Em:AI805281 FT Em:AL042262 Em:AL042677 Em:AV274650 Em:AW503176 Em:BB616572 FT Em:BB807691 Em:BE850216 Em:BI343679 Em:BI347037 Em:BM021539 FT Em:C94838 Em:D77466" FT misc_feature 38829446 FT /note="Clone_left_end: RP1-207H1" FT misc_feature 38831546..38914301 FT /note="annotated region of clone" FT CDS join(AL035555.11:1542..1652,AL035555.11:4094..4283, FT AL035555.11:4836..4999,AL035555.11:8738..8914, FT AL035555.11:17503..17616,AL035555.11:22999..23106, FT AL035555.11:28729..28830,AL035555.11:37440..37586, FT AL035555.11:42781..42978,AL035555.11:45415..45491, FT AL035555.11:46993..47092,AL035555.11:48281..48400, FT AL035555.11:50031..50166,AL035555.11:53792..53979, FT AL035555.11:56830..56910,AL035555.11:57316..57432, FT AL035555.11:58582..58701,AL035555.11:70206..70338, FT AL035555.11:72508..72623,AL035555.11:74637..74743, FT AL035555.11:81081..81156,AL035555.11:82495..82684, FT AL035555.11:89865..90061,AL035555.11:90589..90715, FT AL035555.11:93183..93418,AL035555.11:95211..95315, FT AL035555.11:99349..99462,AL035555.11:101606..101668, FT AL035555.11:104969..105069,AL035555.11:109395..109532, FT AL035555.11:109690..109930,AL035555.11:112601..112800, FT AL035555.11:115675..115828,AL035555.11:117278..117441, FT AL035555.11:118599..118701,AL035555.11:119721..119825, FT AL035555.11:120213..120374,AL035555.11:124545..124769, FT AL035555.11:127484..127656,AL035555.11:129307..129485, FT 38831649..38831836,38834367..38834453,38834545..38834652, FT 38835838..38835972,38838177..38838338,38840312..38840558, FT 38840682..38840923,38841012..38841152,38843367..38843604, FT 38850686..38850828,38851098..38851232,38851652..38851774, FT 38854567..38854780,38858428..38858537,38862477..38862640, FT 38863809..38864001,38866034..38866156,38867552..38867682, FT 38874030..38874183,38875732..38875896,38877294..38877520, FT 38879244..38879362,38881625..38881728,38882977..38883153, FT 38885015..38885182,38885701..38885916,38889145..38889282, FT 38890834..38890961,38891767..38891938,38893831..38893986, FT 38897287..38897442,38899587..38899769,38903368..38903473, FT 38905750..38906002,38906574..38906764,38913243..38913364, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:115108..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /standard_name="OTTHUMP00000017871" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Sw:P23098 Sw:P39057 Sw:Q39565 FT Sw:Q39575 Sw:Q8TE73 Sw:Q8VHE6 Sw:Q9SMH3 Tr:O15064 Tr:O43326 FT Tr:O76506 Tr:O77075 Tr:Q27803 Tr:Q94709 Tr:Q96JB1 Tr:Q99MH8 FT Tr:Q9GPN7 Tr:Q9VH97" FT /protein_id="CAI42433.1" FT /translation="MMKLYIDNAAPDKLKGLCIFFVRCRNDVAINVKTIQEEALFTVLD FT ASKGLLNGIRDMLANIFLPAVLATNNWGALNQSKQGESEKHIFTETINRYLSFLDGARI FT SIEGTVKLKTIDNVNFSKLHTFEEVTAAASNSETVHQLEEVLMVWYKQIEQVLIESEQM FT RKEAGDSGPLTELEHWKRMSAKFNYIIEQIKGPSCKAVINVLNVAHSKLLKNWRDLDAR FT ITDTANESKDNVRYLYTLEKVCQPLYNHDLVSMAHGIQNLINAIRMIHGVSRYYNTSER FT MTSLFIKVTNQMVTACKAYITDGGLNHVWDQETPVVLKKIQDCIFLFKEYQASFHKTRK FT LISESSGEKSFEVSEMYIFGKFEAFCKRLEKITEMITVVQTYSTLSNSTIEGIDIMAIK FT FRNIYQGVKKKQYDILDPRRTEFDTDFLDFMTKINGLEVQIQAFMNSSFGKILSSQQAL FT QLLQRFQKLNIPCLGLEINHTIERILQYYVAELDATKKLYHSQKDDPPLARNMPPIAGK FT ILWVRQLYRRISEPINYFFKNSDILSSPDGKAVIRQYNKISYVLVEFEVVYHTAWIREI FT SQLHYALQATLFVRHPETGKLLVNFDPKILEVVRETKCMIKMKLDVPEQAKRLLKLESK FT LKADKLYLQGLLQYYDELCQEVPSVFVNLMTPKMKKVESVLRQGLTVLTWSSLTLESFF FT QEVELVLDMFNQLLKKISDLCEMHIDTVLKEIAKTVLISLPESGATKVEDMLTLNETYT FT KEWADILNHKSKHVEEAVRELISIFEQIYEVKYTGKVGKQSEQRKHVVFGSETGEGENN FT DYEANIVNEFDTHDKEDEFKKECKEVFAFFSHQLLDSLQKATRLSLDTMKRRIFVASLY FT GRKQSEDIISFIKSEVHLAIPNVVMIPSLDDIQQAINRMIQLTLEVSRGVAHWGQQQIR FT PIKSVIPSPTTTDVTHQNTGKLLKKEERSFEEAIPARKLKNFYPGVAEHKDISKLVLLL FT SSSVNSLRKAAHEALQDFQKYKTLWTEDRDVKVKEFLANNPSLTEIRSEILHYATFEQE FT IDELKPIIVVGALELHTEPMKLALSIEAKAWKMLLCRYLNEEYKKKMSYMIAFINEYLK FT KLSRPIRDLDDVRFAMEALSCIRDNEIQMDMTLGPIEEAYAILNRFEVEVTKEESEAVD FT TLRYSFNKLQSKAVSVQEDLVQVQPKFKSNLLESVEVFREDVINFAEAYELEGPMVPNI FT PPQEASNRLQIFQASFDDLWRKFVTYSSGEQLFGLPVTDYEVLHKTRKELNLLQKLYGL FT YDTVMSSISGYYEILWGDVDIEKINAELLEFQNRCRKLPKGLKDWQAFLDLKKRIDDFS FT ESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNIMEAPLLKHKDDIEDICI FT SAIKEKDIEAKLTQVIENWTNQNLSFAAFKGKGELLLKGTESGEIITLMEDSLMVLGSL FT LSNRYNAPFKKNIQNWVYKLSTSSDIIEEWLVVQNLWVYLEAVFVGGDIAKQLPQEAKR FT FQNIDKSWIKIMQRAHENPNVINCCVGDETMGQLLPHLHEQLEVCQKSLTGYLEKKRLL FT FPRFFFVSDPVLLEILGQASDSHTIQPHLPAVSDNINEVTFHAKDYDRIMAVISREGEK FT IVLDNSVMAKGPVEIWLLDLLKMQMSSLHNIIRSAFYQISDSGFQLLPFLSHFPAQVGL FT LGIQMLWTHDSEEALRNAKDDRKIMQVTNQKFLDILNTLISQTTHDLSKFDRVKFETLI FT TIHVHQRDIFDDLVKMHIKSPTDFEWLKQSRFYFKEDLDQTVVSITDVDFIYQNEFLGC FT TDRLVITPLTDRCYITLAQALGMNMGGAPAGPAGTGKTETTKDMGRCLGKYVVVFNCSD FT QMDFRGLGRIFKGLAQSGSWGCFDEFNRIELPVLSVAAQQIYIVLTARKERKKQFIFSD FT GDCVDLNPEFGIFLTMNPGYAGRQELPENLKIQFRTVAMMVPDRQIIMRVKLASCGFLE FT NVILAQKFYVLYKLCEEQLTKQVHYDFGLRNILSVLRTLGSQKRARPEDSELSIVMRGL FT RDMNLSKLVDEDEPLFLSLINDLFPGLQLDSNTYAELQNAVAHQVQIEGLINHPPWNLK FT LVQLYETSLVRHGLMTLGPSGSGKTTVITILMKAQTECGRPHREMRMNPKAITAPQMFG FT RLDTATNDWTDGIFSTLWRKTLKAKKGENIFLILDGPVDAIWIENLNSVLDDNKTLTLA FT NGDRIPMAPSCKLLFEVHNIENASPATVSRMGMVYISSSALSWRPILQAWLKKRTAQEA FT AVFLTLYEKVFEDTYTYMKLNLNPKMQLLECNYIVQSLNLLEGLIPSKEEGGVSCVEHL FT HKLFVFGLMWSLGALLELESREKLEAFLRQHESKLDLPEIPKGSNQTMYEFYVTDYGDW FT EHWNKKLQPYYYPTDSIPEYSSILVPNVDNIRTNFLIDTIAKQHKAVLLTGEQGTAKTV FT MVKAYLKKYDPEVQLSKSLNFSSATEPMMFQRTIESYVDKRIGSTYGPPGGRKMTVFID FT DINMPVINEWGDQITNEIVRQMMEMEGMYSLDKPGDFTTIVDVQLIAAMIHPGGGRNDI FT PQRLKRQFTVFNCTLPSNASIDKIFGIIGCGYFDPCRSFKPQICEMIVNLVSVGRVLWQ FT WTKVKMLPTPSKFHYIFNLRDLSRIWQGMLTIKAEECASIPTLLSLFKHECSRVIADRF FT ITPEDEQWFNAHLTRAVEENIGSDAASCILPEPYFVDFLREMPEPTGDEPEDSVFEVPK FT IYELMPSFDFLAEKLQFYQRQFNEIIRGTSLDLVFFKDAMTHLIKISRIIRTSCGNALL FT VGVGGSGKQSLSRLASFIAGYQIFQITLTRSYNVTNLTDDLKALYKVAGADGKGITFIF FT TDSEIKDEAFLEYLNNLLSSGEISNLFARDEMDEITQGLISVMKRELPRHPPTFDNLYE FT YFISRSRKNLHVVLCFSPVGEKFRARSLKFPGLISGCTMDWFSRWPREALIAVASYFLS FT DYNIVCSSEIKRQVVETMGLFHDMVSESCESYFQRYRRRAHVTPKSYLSFINGYKNIYA FT EKVKFINEQAERMNIGLDKLMEASESVAKLSQDLAVKEKELAVASIKADEVLAEVTVSA FT QASAKIKNEVQEVKDKAQKIVDEIDSEKVKAESKLEAAKPALEEAEAALNTIKPNDIAT FT VRKLAKPPHLIMRIMDCVLLLFQKKIDPVTMDPEKSCCKPSWGESLKLMSATGFLWSLQ FT QFPKDTINEETVELLQPYFNMDDYTFESAKKVCGNVAGLLSWTLAMAIFYGINREVLPL FT KANLAKQEGRLAVANAELGKAQALLDEKQAELDKVQAKFDAAMNEKMDLLNDADTCRKK FT MQAASTLIDGLSGEKIRWTQQSKEFKAQINRLVGDILLCTGFLSYLGPFNQIFRNYLLK FT DQWEMELRARKIPFTENLNLISMLVDPPTIGEWGLQGLPGDDLSIQNGIIVTKATRYPL FT LIDPQTQGKTWIKSKEKENDLQVTSLNHKYFRTHLEDSLSLGRPLLIEDIHEELDPALD FT NVLEKNFIKSGTTFKVKVGDKECDIMDTFKLYITTKLPNPAFTPEINAKTSVIDFTVTM FT KGLENQLLRRVILTEKQELEAERVKLLEDVTFNKRKMKELEDNLLYKLSATKGSLVDDE FT SLIGVLRTTKQTAAEVSEKLHVAAETEIKINAAQEEFRPAATRGSILYFLITEMSMVNI FT MYQTSLAQFLKLFDQSMARSEKSPLPQKRITNIIEYLTYEVFTYSVRGLYENHKFLFVL FT LMTLKIDLQRGTVKHREFQALIKGGAALDLKACPPKPYRWILDMTWLNLVELSKLPQFA FT EIMNQISRNEKGWKSWFDKDAPEEEIIPDGYNDSLDTCHKLLLIRSWCPDRTVFQARKY FT IADSLEEKYTEPVILNLEKTWEESDTRTPLICFLSMGSDPTNQIDALAKKLKLECRTIS FT MGQGQEVHARKLIQMSMQQGGWVLLQNCHLGLEFMEELLETLITTEASDDSFRVWITTE FT PHDRFPITLLQTSLKFTNEPPQGVRAGLKRTFAGINQDLLDISNLPMWKPMLYTVAFLH FT STVQERRKFGPLGWNIPYEFNSADFSASVQFIQNHLDECDIKKGVSWNTVRYMIGEVQY FT GGRVTDDFDKRLLNCFARVWFSEKMFEPSFCFYTGYKIPLCKTLDQYFEYIQSLPSLDN FT PEVFGLHPNADITYQSNTASAVLETITNIQPKESGGGVGETREAIVYRLSEDMLSKLPP FT DYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRSSLSDLKLAIEGTIIMSENL FT RDALDNMYDARIPQLWKRVSWDSSTLGFWFTELLERNAQFSTWIFEGRPNVFWMTGFFN FT PQGFLTAMRQEVTRAHKGWALDTVTIHNEVLRQTKEEITSPPGEGVYIYGLYMDGAAWD FT RRNGKLMESTPKVLFTQLPVLHIFAINSTAPKDPKLYVCPIYKKPRRTDLTFITVVYLR FT TVLSPDHWILRGVALLCDIK" FT mRNA join(<38831745..38831836,38834367..38834453, FT 38835838..38835972,38838177..>38838266) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-004" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:BF985394" FT CDS join(<38831745..38831836,38834367..38834453, FT 38835838..38835972,38838177..>38838266) FT /codon_start=3 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-004" FT /standard_name="OTTHUMP00000017874" FT /product="dynein, axonemal, heavy chain 8" FT /protein_id="CAI42434.1" FT /translation="TARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQVHYDFGLRNILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKL FT VDEDEPLFLSLINDLFPGLQLDSNTYAELQ" FT mRNA complement(join(38890805..38891343,38892689..38892827, FT 38904069..38904168,AL353700.14:6623..6674)) FT /locus_tag="RP1-207H1.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG719209 Em:BG719373" FT CDS join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,38831649..38831836, FT 38834367..38834453,38834545..38834652,38835838..38835972, FT 38838177..38838338,38840312..38840558,38840682..38840923, FT 38841012..38841152,38843367..38843604,38850686..38850828, FT 38851098..38851232,38851652..38851774,38854567..38854780, FT 38858428..38858537,38862477..38862640,38863809..38864001, FT 38866034..38866156,38867552..38867682,38874030..38874183, FT 38875732..38875896,38877294..38877520,38879244..38879362, FT 38881625..38881728,38882977..38883153,38885015..38885182, FT 38885701..38885916,38889145..38889282,38890834..38890961, FT 38891767..38891938,38893831..38893986,38897287..38897442, FT 38899587..38899769,38903368..38903473,38905750..38906002, FT 38906574..38906764,38913243..38913364, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25282) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /standard_name="OTTHUMP00000017873" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91V63 Tr:Q91XP9" FT /protein_id="CAI42435.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQVCDKRLLLLQHY FT C" FT mRNA join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,38831649..38831836, FT 38834367..38834453,38834545..38834652,38835838..38835972, FT 38838177..38838338,38840312..38840558,38840682..38840923, FT 38841012..38841152,38843367..38843604,38850686..38850828, FT 38851098..38851232,38851652..38851774,38854567..38854780, FT 38858428..38858537,38862477..38862640,38863809..38864001, FT 38866034..38866156,38867552..38867682,38874030..38874183, FT 38875732..38875896,38877294..38877520,38879244..38879362, FT 38881625..38881728,38882977..38883153,38885015..38885182, FT 38885701..38885916,38889145..38889282,38890834..38890961, FT 38891767..38891938,38893831..38893986,38897287..38897442, FT 38899587..38899769,38903368..38903473,38905750..38906002, FT 38906574..38906764,38913243..38913364, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25655) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA144622 Em:AA144987 Em:AA867753 FT Em:AF012380 Em:AI115336 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:BB616572 Em:BM021539 Em:C94838" FT /note="match: cDNAs: Em:AF356521 Em:AF356523 Em:AF363577" FT mRNA join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,38831649..38831836, FT 38834367..38834453,38834545..38834652,38835838..38835972, FT 38838177..38838338,38840312..38840558,38840682..38840923, FT 38841012..38841152,38843367..38843604,38850686..38850828, FT 38851098..38851232,38851652..38851774,38854567..38854780, FT 38858428..38858537,38862477..38862640,38863809..38864001, FT 38866034..38866156,38867552..38867682,38874030..38874183, FT 38875732..38875896,38877294..38877520,38879244..38879362, FT 38881625..38881728,38882977..38883153,38885015..38885182, FT 38885701..38885916,38889145..38889282,38890834..38890961, FT 38891767..38891938,38893831..38893986,38897287..38897442, FT 38899587..38899769,38903368..38903473,38905750..38906002, FT 38906574..38906764,38913243..38913364, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114981..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144987 FT Em:AA447518 Em:AA867753 Em:AF012381 Em:AI115336 Em:AI121650 FT Em:AI269674 Em:AI327324 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:AI805281 Em:AL042262 Em:AL042677 Em:AV274650 FT Em:AW503176 Em:BB616572 Em:BB807691 Em:BE850216 Em:BI343679 FT Em:BI347037 Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356520 Em:AF356522" FT CDS join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,38831649..38831836, FT 38834367..38834453,38834545..38834652,38835838..38835972, FT 38838177..38838338,38840312..38840558,38840682..38840923, FT 38841012..38841152,38843367..38843604,38850686..38850828, FT 38851098..38851232,38851652..38851774,38854567..38854780, FT 38858428..38858537,38862477..38862640,38863809..38864001, FT 38866034..38866156,38867552..38867682,38874030..38874183, FT 38875732..38875896,38877294..38877520,38879244..38879362, FT 38881625..38881728,38882977..38883153,38885015..38885182, FT 38885701..38885916,38889145..38889282,38890834..38890961, FT 38891767..38891938,38893831..38893986,38897287..38897442, FT 38899587..38899769,38903368..38903473,38905750..38906002, FT 38906574..38906764,38913243..38913364, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:115108..115395)) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /standard_name="OTTHUMP00000017872" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91XP8 Tr:Q91XQ0" FT /protein_id="CAI42436.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQGGWVLLQNCHLG FT LEFMEELLETLITTEASDDSFRVWITTEPHDRFPITLLQTSLKFTNEPPQGVRAGLKRT FT FAGINQDLLDISNLPMWKPMLYTVAFLHSTVQERRKFGPLGWNIPYEFNSADFSASVQF FT IQNHLDECDIKKGVSWNTVRYMIGEVQYGGRVTDDFDKRLLNCFARVWFSEKMFEPSFC FT FYTGYKIPLCKTLDQYFEYIQSLPSLDNPEVFGLHPNADITYQSNTASAVLETITNIQP FT KESGGGVGETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRM FT QRVISILRSSLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT FT ELLERNAQFSTWIFEGRPNVFWMTGFFNPQGFLTAMRQEVTRAHKGWALDTVTIHNEVL FT RQTKEEITSPPGEGVYIYGLYMDGAAWDRRNGKLMESTPKVLFTQLPVLHIFAINSTAP FT KDPKLYVCPIYKKPRRTDLTFITVVYLRTVLSPDHWILRGVALLCDIK" FT mRNA join(AL391415.12:64626..64703,AL391415.12:64841..64975, FT AL035555.11:1501..1652,AL035555.11:4094..4283, FT AL035555.11:4836..4999,AL035555.11:8738..8914, FT AL035555.11:17503..17616,AL035555.11:22999..23106, FT AL035555.11:28729..28830,AL035555.11:37440..37586, FT AL035555.11:42781..42978,AL035555.11:45415..45491, FT AL035555.11:46993..47092,AL035555.11:48281..48400, FT AL035555.11:50031..50166,AL035555.11:53792..53979, FT AL035555.11:56830..56910,AL035555.11:57316..57432, FT AL035555.11:58582..58701,AL035555.11:70206..70338, FT AL035555.11:72508..72623,AL035555.11:74637..74743, FT AL035555.11:81081..81156,AL035555.11:82495..82684, FT AL035555.11:89865..90061,AL035555.11:90589..90715, FT AL035555.11:93183..93418,AL035555.11:95211..95315, FT AL035555.11:99349..99462,AL035555.11:101606..101668, FT AL035555.11:104969..105069,AL035555.11:109395..109532, FT AL035555.11:109690..109930,AL035555.11:112601..112800, FT AL035555.11:115675..115828,AL035555.11:117278..117441, FT AL035555.11:118599..118701,AL035555.11:119721..119825, FT AL035555.11:120213..120374,AL035555.11:124545..124769, FT AL035555.11:127484..127656,AL035555.11:129307..129485, FT 38831649..38831836,38834367..38834453,38834545..38834652, FT 38835838..38835972,38838177..38838338,38840312..38840558, FT 38840682..38840923,38841012..38841152,38843367..38843604, FT 38850686..38850828,38851098..38851232,38851652..38851774, FT 38854567..38854780,38858428..38858537,38862477..38862640, FT 38863809..38864001,38866034..38866156,38867552..38867682, FT 38874030..38874183,38875732..38875896,38877294..38877520, FT 38879244..38879362,38881625..38881728,38882977..38883153, FT 38885015..38885182,38885701..38885916,38889145..38889282, FT 38890834..38890961,38891767..38891938,38893831..38893986, FT 38897287..38897442,38899587..38899769,38903368..38903473, FT 38905750..38906002,38906574..38906764,38913243..38913364, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114975..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144622 FT Em:AA144987 Em:AA447518 Em:AA867753 Em:AF012380 Em:AF012381 FT Em:AI115336 Em:AI121650 Em:AI269674 Em:AI326136 Em:AI327324 FT Em:AI386463 Em:AI429155 Em:AI509627 Em:AI595507 Em:AI805281 FT Em:AL042262 Em:AL042677 Em:AV274650 Em:AW503176 Em:BB616572 FT Em:BB807691 Em:BE850216 Em:BI343679 Em:BI347037 Em:BM021539 FT Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356519" FT CDS 38895807..38895929 FT /pseudo FT /locus_tag="RP1-207H1.2-001" FT /product="pseudogene similar to part of 40S Ribosomal FT protein S2 RPS2" FT /note="match: proteins: Sw:O18789 Sw:P15880 Sw:P25444 FT Sw:P27952 Sw:P49154 Tr:O55212 Tr:O60249 Tr:O89072" FT mRNA complement(join(38890805..38891343,38892689..38892827, FT 38899073..38899147)) FT /locus_tag="RP1-207H1.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG187239" FT mRNA complement(join(38897126..38897390,38899073..38899149, FT 38900653..38900693)) FT /locus_tag="RP1-207H1.3-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AW105037" FT misc_feature 38914302..38970710 FT /note="annotated region of clone" FT CDS join(AL035555.11:1542..1652,AL035555.11:4094..4283, FT AL035555.11:4836..4999,AL035555.11:8738..8914, FT AL035555.11:17503..17616,AL035555.11:22999..23106, FT AL035555.11:28729..28830,AL035555.11:37440..37586, FT AL035555.11:42781..42978,AL035555.11:45415..45491, FT AL035555.11:46993..47092,AL035555.11:48281..48400, FT AL035555.11:50031..50166,AL035555.11:53792..53979, FT AL035555.11:56830..56910,AL035555.11:57316..57432, FT AL035555.11:58582..58701,AL035555.11:70206..70338, FT AL035555.11:72508..72623,AL035555.11:74637..74743, FT AL035555.11:81081..81156,AL035555.11:82495..82684, FT AL035555.11:89865..90061,AL035555.11:90589..90715, FT AL035555.11:93183..93418,AL035555.11:95211..95315, FT AL035555.11:99349..99462,AL035555.11:101606..101668, FT AL035555.11:104969..105069,AL035555.11:109395..109532, FT AL035555.11:109690..109930,AL035555.11:112601..112800, FT AL035555.11:115675..115828,AL035555.11:117278..117441, FT AL035555.11:118599..118701,AL035555.11:119721..119825, FT AL035555.11:120213..120374,AL035555.11:124545..124769, FT AL035555.11:127484..127656,AL035555.11:129307..129485, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT 38917228..38917346,38919094..38919296,38939368..38939441, FT 38941437..38941589,38942150..38942305,38950122..38950238, FT 38951982..38952083,38957788..38957948, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:115108..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /standard_name="OTTHUMP00000017871" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Sw:P23098 Sw:P39057 Sw:Q39565 FT Sw:Q39575 Sw:Q8TE73 Sw:Q8VHE6 Sw:Q9SMH3 Tr:O15064 Tr:O43326 FT Tr:O76506 Tr:O77075 Tr:Q27803 Tr:Q94709 Tr:Q96JB1 Tr:Q99MH8 FT Tr:Q9GPN7 Tr:Q9VH97" FT /protein_id="CAI20292.1" FT /translation="MMKLYIDNAAPDKLKGLCIFFVRCRNDVAINVKTIQEEALFTVLD FT ASKGLLNGIRDMLANIFLPAVLATNNWGALNQSKQGESEKHIFTETINRYLSFLDGARI FT SIEGTVKLKTIDNVNFSKLHTFEEVTAAASNSETVHQLEEVLMVWYKQIEQVLIESEQM FT RKEAGDSGPLTELEHWKRMSAKFNYIIEQIKGPSCKAVINVLNVAHSKLLKNWRDLDAR FT ITDTANESKDNVRYLYTLEKVCQPLYNHDLVSMAHGIQNLINAIRMIHGVSRYYNTSER FT MTSLFIKVTNQMVTACKAYITDGGLNHVWDQETPVVLKKIQDCIFLFKEYQASFHKTRK FT LISESSGEKSFEVSEMYIFGKFEAFCKRLEKITEMITVVQTYSTLSNSTIEGIDIMAIK FT FRNIYQGVKKKQYDILDPRRTEFDTDFLDFMTKINGLEVQIQAFMNSSFGKILSSQQAL FT QLLQRFQKLNIPCLGLEINHTIERILQYYVAELDATKKLYHSQKDDPPLARNMPPIAGK FT ILWVRQLYRRISEPINYFFKNSDILSSPDGKAVIRQYNKISYVLVEFEVVYHTAWIREI FT SQLHYALQATLFVRHPETGKLLVNFDPKILEVVRETKCMIKMKLDVPEQAKRLLKLESK FT LKADKLYLQGLLQYYDELCQEVPSVFVNLMTPKMKKVESVLRQGLTVLTWSSLTLESFF FT QEVELVLDMFNQLLKKISDLCEMHIDTVLKEIAKTVLISLPESGATKVEDMLTLNETYT FT KEWADILNHKSKHVEEAVRELISIFEQIYEVKYTGKVGKQSEQRKHVVFGSETGEGENN FT DYEANIVNEFDTHDKEDEFKKECKEVFAFFSHQLLDSLQKATRLSLDTMKRRIFVASLY FT GRKQSEDIISFIKSEVHLAIPNVVMIPSLDDIQQAINRMIQLTLEVSRGVAHWGQQQIR FT PIKSVIPSPTTTDVTHQNTGKLLKKEERSFEEAIPARKLKNFYPGVAEHKDISKLVLLL FT SSSVNSLRKAAHEALQDFQKYKTLWTEDRDVKVKEFLANNPSLTEIRSEILHYATFEQE FT IDELKPIIVVGALELHTEPMKLALSIEAKAWKMLLCRYLNEEYKKKMSYMIAFINEYLK FT KLSRPIRDLDDVRFAMEALSCIRDNEIQMDMTLGPIEEAYAILNRFEVEVTKEESEAVD FT TLRYSFNKLQSKAVSVQEDLVQVQPKFKSNLLESVEVFREDVINFAEAYELEGPMVPNI FT PPQEASNRLQIFQASFDDLWRKFVTYSSGEQLFGLPVTDYEVLHKTRKELNLLQKLYGL FT YDTVMSSISGYYEILWGDVDIEKINAELLEFQNRCRKLPKGLKDWQAFLDLKKRIDDFS FT ESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNIMEAPLLKHKDDIEDICI FT SAIKEKDIEAKLTQVIENWTNQNLSFAAFKGKGELLLKGTESGEIITLMEDSLMVLGSL FT LSNRYNAPFKKNIQNWVYKLSTSSDIIEEWLVVQNLWVYLEAVFVGGDIAKQLPQEAKR FT FQNIDKSWIKIMQRAHENPNVINCCVGDETMGQLLPHLHEQLEVCQKSLTGYLEKKRLL FT FPRFFFVSDPVLLEILGQASDSHTIQPHLPAVSDNINEVTFHAKDYDRIMAVISREGEK FT IVLDNSVMAKGPVEIWLLDLLKMQMSSLHNIIRSAFYQISDSGFQLLPFLSHFPAQVGL FT LGIQMLWTHDSEEALRNAKDDRKIMQVTNQKFLDILNTLISQTTHDLSKFDRVKFETLI FT TIHVHQRDIFDDLVKMHIKSPTDFEWLKQSRFYFKEDLDQTVVSITDVDFIYQNEFLGC FT TDRLVITPLTDRCYITLAQALGMNMGGAPAGPAGTGKTETTKDMGRCLGKYVVVFNCSD FT QMDFRGLGRIFKGLAQSGSWGCFDEFNRIELPVLSVAAQQIYIVLTARKERKKQFIFSD FT GDCVDLNPEFGIFLTMNPGYAGRQELPENLKIQFRTVAMMVPDRQIIMRVKLASCGFLE FT NVILAQKFYVLYKLCEEQLTKQVHYDFGLRNILSVLRTLGSQKRARPEDSELSIVMRGL FT RDMNLSKLVDEDEPLFLSLINDLFPGLQLDSNTYAELQNAVAHQVQIEGLINHPPWNLK FT LVQLYETSLVRHGLMTLGPSGSGKTTVITILMKAQTECGRPHREMRMNPKAITAPQMFG FT RLDTATNDWTDGIFSTLWRKTLKAKKGENIFLILDGPVDAIWIENLNSVLDDNKTLTLA FT NGDRIPMAPSCKLLFEVHNIENASPATVSRMGMVYISSSALSWRPILQAWLKKRTAQEA FT AVFLTLYEKVFEDTYTYMKLNLNPKMQLLECNYIVQSLNLLEGLIPSKEEGGVSCVEHL FT HKLFVFGLMWSLGALLELESREKLEAFLRQHESKLDLPEIPKGSNQTMYEFYVTDYGDW FT EHWNKKLQPYYYPTDSIPEYSSILVPNVDNIRTNFLIDTIAKQHKAVLLTGEQGTAKTV FT MVKAYLKKYDPEVQLSKSLNFSSATEPMMFQRTIESYVDKRIGSTYGPPGGRKMTVFID FT DINMPVINEWGDQITNEIVRQMMEMEGMYSLDKPGDFTTIVDVQLIAAMIHPGGGRNDI FT PQRLKRQFTVFNCTLPSNASIDKIFGIIGCGYFDPCRSFKPQICEMIVNLVSVGRVLWQ FT WTKVKMLPTPSKFHYIFNLRDLSRIWQGMLTIKAEECASIPTLLSLFKHECSRVIADRF FT ITPEDEQWFNAHLTRAVEENIGSDAASCILPEPYFVDFLREMPEPTGDEPEDSVFEVPK FT IYELMPSFDFLAEKLQFYQRQFNEIIRGTSLDLVFFKDAMTHLIKISRIIRTSCGNALL FT VGVGGSGKQSLSRLASFIAGYQIFQITLTRSYNVTNLTDDLKALYKVAGADGKGITFIF FT TDSEIKDEAFLEYLNNLLSSGEISNLFARDEMDEITQGLISVMKRELPRHPPTFDNLYE FT YFISRSRKNLHVVLCFSPVGEKFRARSLKFPGLISGCTMDWFSRWPREALIAVASYFLS FT DYNIVCSSEIKRQVVETMGLFHDMVSESCESYFQRYRRRAHVTPKSYLSFINGYKNIYA FT EKVKFINEQAERMNIGLDKLMEASESVAKLSQDLAVKEKELAVASIKADEVLAEVTVSA FT QASAKIKNEVQEVKDKAQKIVDEIDSEKVKAESKLEAAKPALEEAEAALNTIKPNDIAT FT VRKLAKPPHLIMRIMDCVLLLFQKKIDPVTMDPEKSCCKPSWGESLKLMSATGFLWSLQ FT QFPKDTINEETVELLQPYFNMDDYTFESAKKVCGNVAGLLSWTLAMAIFYGINREVLPL FT KANLAKQEGRLAVANAELGKAQALLDEKQAELDKVQAKFDAAMNEKMDLLNDADTCRKK FT MQAASTLIDGLSGEKIRWTQQSKEFKAQINRLVGDILLCTGFLSYLGPFNQIFRNYLLK FT DQWEMELRARKIPFTENLNLISMLVDPPTIGEWGLQGLPGDDLSIQNGIIVTKATRYPL FT LIDPQTQGKTWIKSKEKENDLQVTSLNHKYFRTHLEDSLSLGRPLLIEDIHEELDPALD FT NVLEKNFIKSGTTFKVKVGDKECDIMDTFKLYITTKLPNPAFTPEINAKTSVIDFTVTM FT KGLENQLLRRVILTEKQELEAERVKLLEDVTFNKRKMKELEDNLLYKLSATKGSLVDDE FT SLIGVLRTTKQTAAEVSEKLHVAAETEIKINAAQEEFRPAATRGSILYFLITEMSMVNI FT MYQTSLAQFLKLFDQSMARSEKSPLPQKRITNIIEYLTYEVFTYSVRGLYENHKFLFVL FT LMTLKIDLQRGTVKHREFQALIKGGAALDLKACPPKPYRWILDMTWLNLVELSKLPQFA FT EIMNQISRNEKGWKSWFDKDAPEEEIIPDGYNDSLDTCHKLLLIRSWCPDRTVFQARKY FT IADSLEEKYTEPVILNLEKTWEESDTRTPLICFLSMGSDPTNQIDALAKKLKLECRTIS FT MGQGQEVHARKLIQMSMQQGGWVLLQNCHLGLEFMEELLETLITTEASDDSFRVWITTE FT PHDRFPITLLQTSLKFTNEPPQGVRAGLKRTFAGINQDLLDISNLPMWKPMLYTVAFLH FT STVQERRKFGPLGWNIPYEFNSADFSASVQFIQNHLDECDIKKGVSWNTVRYMIGEVQY FT GGRVTDDFDKRLLNCFARVWFSEKMFEPSFCFYTGYKIPLCKTLDQYFEYIQSLPSLDN FT PEVFGLHPNADITYQSNTASAVLETITNIQPKESGGGVGETREAIVYRLSEDMLSKLPP FT DYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRSSLSDLKLAIEGTIIMSENL FT RDALDNMYDARIPQLWKRVSWDSSTLGFWFTELLERNAQFSTWIFEGRPNVFWMTGFFN FT PQGFLTAMRQEVTRAHKGWALDTVTIHNEVLRQTKEEITSPPGEGVYIYGLYMDGAAWD FT RRNGKLMESTPKVLFTQLPVLHIFAINSTAPKDPKLYVCPIYKKPRRTDLTFITVVYLR FT TVLSPDHWILRGVALLCDIK" FT mRNA complement(join(AL034345.3:61260..61798, FT AL034345.3:63144..63282,AL034345.3:74524..74623, FT 38920824..38920875)) FT /locus_tag="RP1-207H1.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG719209 Em:BG719373" FT misc_feature 38932027 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 270 bases by BAMHI, ECORI and HINDIII FT restriction enzyme digest data" FT misc_feature 38970511 FT /note="Clone_left_end: RP1-202I21" FT CDS join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,38917228..38917346, FT 38919094..38919296,38939368..38939483) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /standard_name="OTTHUMP00000017873" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91V63 Tr:Q91XP9" FT /protein_id="CAI20293.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQVCDKRLLLLQHY FT C" FT mRNA join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,38917228..38917346, FT 38919094..38919296,38939368..38939856) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-003" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA144622 Em:AA144987 Em:AA867753 FT Em:AF012380 Em:AI115336 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:BB616572 Em:BM021539 Em:C94838" FT /note="match: cDNAs: Em:AF356521 Em:AF356523 Em:AF363577" FT mRNA join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,38917228..38917346, FT 38919094..38919296,38939368..38939441,38941437..38941589, FT 38942150..38942305,38950122..38950238,38951982..38952083, FT 38957788..38957948,complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114981..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144987 FT Em:AA447518 Em:AA867753 Em:AF012381 Em:AI115336 Em:AI121650 FT Em:AI269674 Em:AI327324 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:AI805281 Em:AL042262 Em:AL042677 Em:AV274650 FT Em:AW503176 Em:BB616572 Em:BB807691 Em:BE850216 Em:BI343679 FT Em:BI347037 Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356520 Em:AF356522" FT CDS join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,38917228..38917346, FT 38919094..38919296,38939368..38939441,38941437..38941589, FT 38942150..38942305,38950122..38950238,38951982..38952083, FT 38957788..38957948,complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:115108..115395)) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /standard_name="OTTHUMP00000017872" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91XP8 Tr:Q91XQ0" FT /protein_id="CAI20294.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQGGWVLLQNCHLG FT LEFMEELLETLITTEASDDSFRVWITTEPHDRFPITLLQTSLKFTNEPPQGVRAGLKRT FT FAGINQDLLDISNLPMWKPMLYTVAFLHSTVQERRKFGPLGWNIPYEFNSADFSASVQF FT IQNHLDECDIKKGVSWNTVRYMIGEVQYGGRVTDDFDKRLLNCFARVWFSEKMFEPSFC FT FYTGYKIPLCKTLDQYFEYIQSLPSLDNPEVFGLHPNADITYQSNTASAVLETITNIQP FT KESGGGVGETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRM FT QRVISILRSSLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT FT ELLERNAQFSTWIFEGRPNVFWMTGFFNPQGFLTAMRQEVTRAHKGWALDTVTIHNEVL FT RQTKEEITSPPGEGVYIYGLYMDGAAWDRRNGKLMESTPKVLFTQLPVLHIFAINSTAP FT KDPKLYVCPIYKKPRRTDLTFITVVYLRTVLSPDHWILRGVALLCDIK" FT mRNA join(AL391415.12:64626..64703,AL391415.12:64841..64975, FT AL035555.11:1501..1652,AL035555.11:4094..4283, FT AL035555.11:4836..4999,AL035555.11:8738..8914, FT AL035555.11:17503..17616,AL035555.11:22999..23106, FT AL035555.11:28729..28830,AL035555.11:37440..37586, FT AL035555.11:42781..42978,AL035555.11:45415..45491, FT AL035555.11:46993..47092,AL035555.11:48281..48400, FT AL035555.11:50031..50166,AL035555.11:53792..53979, FT AL035555.11:56830..56910,AL035555.11:57316..57432, FT AL035555.11:58582..58701,AL035555.11:70206..70338, FT AL035555.11:72508..72623,AL035555.11:74637..74743, FT AL035555.11:81081..81156,AL035555.11:82495..82684, FT AL035555.11:89865..90061,AL035555.11:90589..90715, FT AL035555.11:93183..93418,AL035555.11:95211..95315, FT AL035555.11:99349..99462,AL035555.11:101606..101668, FT AL035555.11:104969..105069,AL035555.11:109395..109532, FT AL035555.11:109690..109930,AL035555.11:112601..112800, FT AL035555.11:115675..115828,AL035555.11:117278..117441, FT AL035555.11:118599..118701,AL035555.11:119721..119825, FT AL035555.11:120213..120374,AL035555.11:124545..124769, FT AL035555.11:127484..127656,AL035555.11:129307..129485, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT 38917228..38917346,38919094..38919296,38939368..38939441, FT 38941437..38941589,38942150..38942305,38950122..38950238, FT 38951982..38952083,38957788..38957948, FT complement(AL035690.10:136530..136686), FT complement(AL035690.10:133133..133285), FT complement(AL035690.10:132863..133052), FT complement(AL035690.10:118833..118954), FT complement(AL035690.10:114975..115395)) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144622 FT Em:AA144987 Em:AA447518 Em:AA867753 Em:AF012380 Em:AF012381 FT Em:AI115336 Em:AI121650 Em:AI269674 Em:AI326136 Em:AI327324 FT Em:AI386463 Em:AI429155 Em:AI509627 Em:AI595507 Em:AI805281 FT Em:AL042262 Em:AL042677 Em:AV274650 Em:AW503176 Em:BB616572 FT Em:BB807691 Em:BE850216 Em:BI343679 Em:BI347037 Em:BM021539 FT Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356519" FT misc_feature complement(38970711..39113275) FT /note="annotated region of clone" FT CDS join(AL035555.11:1542..1652,AL035555.11:4094..4283, FT AL035555.11:4836..4999,AL035555.11:8738..8914, FT AL035555.11:17503..17616,AL035555.11:22999..23106, FT AL035555.11:28729..28830,AL035555.11:37440..37586, FT AL035555.11:42781..42978,AL035555.11:45415..45491, FT AL035555.11:46993..47092,AL035555.11:48281..48400, FT AL035555.11:50031..50166,AL035555.11:53792..53979, FT AL035555.11:56830..56910,AL035555.11:57316..57432, FT AL035555.11:58582..58701,AL035555.11:70206..70338, FT AL035555.11:72508..72623,AL035555.11:74637..74743, FT AL035555.11:81081..81156,AL035555.11:82495..82684, FT AL035555.11:89865..90061,AL035555.11:90589..90715, FT AL035555.11:93183..93418,AL035555.11:95211..95315, FT AL035555.11:99349..99462,AL035555.11:101606..101668, FT AL035555.11:104969..105069,AL035555.11:109395..109532, FT AL035555.11:109690..109930,AL035555.11:112601..112800, FT AL035555.11:115675..115828,AL035555.11:117278..117441, FT AL035555.11:118599..118701,AL035555.11:119721..119825, FT AL035555.11:120213..120374,AL035555.11:124545..124769, FT AL035555.11:127484..127656,AL035555.11:129307..129485, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT 38976590..38976746,38979991..38980143,38980224..38980413, FT 38994322..38994443,38997881..38998168) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /standard_name="OTTHUMP00000017871" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Sw:P23098 Sw:P39057 Sw:Q39565 FT Sw:Q39575 Sw:Q8TE73 Sw:Q8VHE6 Sw:Q9SMH3 Tr:O15064 Tr:O43326 FT Tr:O76506 Tr:O77075 Tr:Q27803 Tr:Q94709 Tr:Q96JB1 Tr:Q99MH8 FT Tr:Q9GPN7 Tr:Q9VH97" FT /protein_id="CAI19769.1" FT /translation="MMKLYIDNAAPDKLKGLCIFFVRCRNDVAINVKTIQEEALFTVLD FT ASKGLLNGIRDMLANIFLPAVLATNNWGALNQSKQGESEKHIFTETINRYLSFLDGARI FT SIEGTVKLKTIDNVNFSKLHTFEEVTAAASNSETVHQLEEVLMVWYKQIEQVLIESEQM FT RKEAGDSGPLTELEHWKRMSAKFNYIIEQIKGPSCKAVINVLNVAHSKLLKNWRDLDAR FT ITDTANESKDNVRYLYTLEKVCQPLYNHDLVSMAHGIQNLINAIRMIHGVSRYYNTSER FT MTSLFIKVTNQMVTACKAYITDGGLNHVWDQETPVVLKKIQDCIFLFKEYQASFHKTRK FT LISESSGEKSFEVSEMYIFGKFEAFCKRLEKITEMITVVQTYSTLSNSTIEGIDIMAIK FT FRNIYQGVKKKQYDILDPRRTEFDTDFLDFMTKINGLEVQIQAFMNSSFGKILSSQQAL FT QLLQRFQKLNIPCLGLEINHTIERILQYYVAELDATKKLYHSQKDDPPLARNMPPIAGK FT ILWVRQLYRRISEPINYFFKNSDILSSPDGKAVIRQYNKISYVLVEFEVVYHTAWIREI FT SQLHYALQATLFVRHPETGKLLVNFDPKILEVVRETKCMIKMKLDVPEQAKRLLKLESK FT LKADKLYLQGLLQYYDELCQEVPSVFVNLMTPKMKKVESVLRQGLTVLTWSSLTLESFF FT QEVELVLDMFNQLLKKISDLCEMHIDTVLKEIAKTVLISLPESGATKVEDMLTLNETYT FT KEWADILNHKSKHVEEAVRELISIFEQIYEVKYTGKVGKQSEQRKHVVFGSETGEGENN FT DYEANIVNEFDTHDKEDEFKKECKEVFAFFSHQLLDSLQKATRLSLDTMKRRIFVASLY FT GRKQSEDIISFIKSEVHLAIPNVVMIPSLDDIQQAINRMIQLTLEVSRGVAHWGQQQIR FT PIKSVIPSPTTTDVTHQNTGKLLKKEERSFEEAIPARKLKNFYPGVAEHKDISKLVLLL FT SSSVNSLRKAAHEALQDFQKYKTLWTEDRDVKVKEFLANNPSLTEIRSEILHYATFEQE FT IDELKPIIVVGALELHTEPMKLALSIEAKAWKMLLCRYLNEEYKKKMSYMIAFINEYLK FT KLSRPIRDLDDVRFAMEALSCIRDNEIQMDMTLGPIEEAYAILNRFEVEVTKEESEAVD FT TLRYSFNKLQSKAVSVQEDLVQVQPKFKSNLLESVEVFREDVINFAEAYELEGPMVPNI FT PPQEASNRLQIFQASFDDLWRKFVTYSSGEQLFGLPVTDYEVLHKTRKELNLLQKLYGL FT YDTVMSSISGYYEILWGDVDIEKINAELLEFQNRCRKLPKGLKDWQAFLDLKKRIDDFS FT ESCPLLEMMTNKAMKQRHWDRISELTGTPFDVESDSFCLRNIMEAPLLKHKDDIEDICI FT SAIKEKDIEAKLTQVIENWTNQNLSFAAFKGKGELLLKGTESGEIITLMEDSLMVLGSL FT LSNRYNAPFKKNIQNWVYKLSTSSDIIEEWLVVQNLWVYLEAVFVGGDIAKQLPQEAKR FT FQNIDKSWIKIMQRAHENPNVINCCVGDETMGQLLPHLHEQLEVCQKSLTGYLEKKRLL FT FPRFFFVSDPVLLEILGQASDSHTIQPHLPAVSDNINEVTFHAKDYDRIMAVISREGEK FT IVLDNSVMAKGPVEIWLLDLLKMQMSSLHNIIRSAFYQISDSGFQLLPFLSHFPAQVGL FT LGIQMLWTHDSEEALRNAKDDRKIMQVTNQKFLDILNTLISQTTHDLSKFDRVKFETLI FT TIHVHQRDIFDDLVKMHIKSPTDFEWLKQSRFYFKEDLDQTVVSITDVDFIYQNEFLGC FT TDRLVITPLTDRCYITLAQALGMNMGGAPAGPAGTGKTETTKDMGRCLGKYVVVFNCSD FT QMDFRGLGRIFKGLAQSGSWGCFDEFNRIELPVLSVAAQQIYIVLTARKERKKQFIFSD FT GDCVDLNPEFGIFLTMNPGYAGRQELPENLKIQFRTVAMMVPDRQIIMRVKLASCGFLE FT NVILAQKFYVLYKLCEEQLTKQVHYDFGLRNILSVLRTLGSQKRARPEDSELSIVMRGL FT RDMNLSKLVDEDEPLFLSLINDLFPGLQLDSNTYAELQNAVAHQVQIEGLINHPPWNLK FT LVQLYETSLVRHGLMTLGPSGSGKTTVITILMKAQTECGRPHREMRMNPKAITAPQMFG FT RLDTATNDWTDGIFSTLWRKTLKAKKGENIFLILDGPVDAIWIENLNSVLDDNKTLTLA FT NGDRIPMAPSCKLLFEVHNIENASPATVSRMGMVYISSSALSWRPILQAWLKKRTAQEA FT AVFLTLYEKVFEDTYTYMKLNLNPKMQLLECNYIVQSLNLLEGLIPSKEEGGVSCVEHL FT HKLFVFGLMWSLGALLELESREKLEAFLRQHESKLDLPEIPKGSNQTMYEFYVTDYGDW FT EHWNKKLQPYYYPTDSIPEYSSILVPNVDNIRTNFLIDTIAKQHKAVLLTGEQGTAKTV FT MVKAYLKKYDPEVQLSKSLNFSSATEPMMFQRTIESYVDKRIGSTYGPPGGRKMTVFID FT DINMPVINEWGDQITNEIVRQMMEMEGMYSLDKPGDFTTIVDVQLIAAMIHPGGGRNDI FT PQRLKRQFTVFNCTLPSNASIDKIFGIIGCGYFDPCRSFKPQICEMIVNLVSVGRVLWQ FT WTKVKMLPTPSKFHYIFNLRDLSRIWQGMLTIKAEECASIPTLLSLFKHECSRVIADRF FT ITPEDEQWFNAHLTRAVEENIGSDAASCILPEPYFVDFLREMPEPTGDEPEDSVFEVPK FT IYELMPSFDFLAEKLQFYQRQFNEIIRGTSLDLVFFKDAMTHLIKISRIIRTSCGNALL FT VGVGGSGKQSLSRLASFIAGYQIFQITLTRSYNVTNLTDDLKALYKVAGADGKGITFIF FT TDSEIKDEAFLEYLNNLLSSGEISNLFARDEMDEITQGLISVMKRELPRHPPTFDNLYE FT YFISRSRKNLHVVLCFSPVGEKFRARSLKFPGLISGCTMDWFSRWPREALIAVASYFLS FT DYNIVCSSEIKRQVVETMGLFHDMVSESCESYFQRYRRRAHVTPKSYLSFINGYKNIYA FT EKVKFINEQAERMNIGLDKLMEASESVAKLSQDLAVKEKELAVASIKADEVLAEVTVSA FT QASAKIKNEVQEVKDKAQKIVDEIDSEKVKAESKLEAAKPALEEAEAALNTIKPNDIAT FT VRKLAKPPHLIMRIMDCVLLLFQKKIDPVTMDPEKSCCKPSWGESLKLMSATGFLWSLQ FT QFPKDTINEETVELLQPYFNMDDYTFESAKKVCGNVAGLLSWTLAMAIFYGINREVLPL FT KANLAKQEGRLAVANAELGKAQALLDEKQAELDKVQAKFDAAMNEKMDLLNDADTCRKK FT MQAASTLIDGLSGEKIRWTQQSKEFKAQINRLVGDILLCTGFLSYLGPFNQIFRNYLLK FT DQWEMELRARKIPFTENLNLISMLVDPPTIGEWGLQGLPGDDLSIQNGIIVTKATRYPL FT LIDPQTQGKTWIKSKEKENDLQVTSLNHKYFRTHLEDSLSLGRPLLIEDIHEELDPALD FT NVLEKNFIKSGTTFKVKVGDKECDIMDTFKLYITTKLPNPAFTPEINAKTSVIDFTVTM FT KGLENQLLRRVILTEKQELEAERVKLLEDVTFNKRKMKELEDNLLYKLSATKGSLVDDE FT SLIGVLRTTKQTAAEVSEKLHVAAETEIKINAAQEEFRPAATRGSILYFLITEMSMVNI FT MYQTSLAQFLKLFDQSMARSEKSPLPQKRITNIIEYLTYEVFTYSVRGLYENHKFLFVL FT LMTLKIDLQRGTVKHREFQALIKGGAALDLKACPPKPYRWILDMTWLNLVELSKLPQFA FT EIMNQISRNEKGWKSWFDKDAPEEEIIPDGYNDSLDTCHKLLLIRSWCPDRTVFQARKY FT IADSLEEKYTEPVILNLEKTWEESDTRTPLICFLSMGSDPTNQIDALAKKLKLECRTIS FT MGQGQEVHARKLIQMSMQQGGWVLLQNCHLGLEFMEELLETLITTEASDDSFRVWITTE FT PHDRFPITLLQTSLKFTNEPPQGVRAGLKRTFAGINQDLLDISNLPMWKPMLYTVAFLH FT STVQERRKFGPLGWNIPYEFNSADFSASVQFIQNHLDECDIKKGVSWNTVRYMIGEVQY FT GGRVTDDFDKRLLNCFARVWFSEKMFEPSFCFYTGYKIPLCKTLDQYFEYIQSLPSLDN FT PEVFGLHPNADITYQSNTASAVLETITNIQPKESGGGVGETREAIVYRLSEDMLSKLPP FT DYIPHEVKSRLIKMGHLNSMNIFLRQEIDRMQRVISILRSSLSDLKLAIEGTIIMSENL FT RDALDNMYDARIPQLWKRVSWDSSTLGFWFTELLERNAQFSTWIFEGRPNVFWMTGFFN FT PQGFLTAMRQEVTRAHKGWALDTVTIHNEVLRQTKEEITSPPGEGVYIYGLYMDGAAWD FT RRNGKLMESTPKVLFTQLPVLHIFAINSTAPKDPKLYVCPIYKKPRRTDLTFITVVYLR FT TVLSPDHWILRGVALLCDIK" FT mRNA complement(join(39071840..39073552,39082659..39082965)) FT /gene="C6orf64" FT /locus_tag="RP1-202I21.6-003" FT /product="chromosome 6 open reading frame 64" FT /note="match: ESTs: Em:AL552149 Em:AU137041 Em:BG708841 FT Em:BG722325 Em:BI461885 Em:BI766917" FT /note="match: cDNAs: Em:AK001963.1 Em:AK007941.1" FT CDS complement(join(39073208..39073552,39082659..39082865)) FT /gene="C6orf64" FT /locus_tag="RP1-202I21.6-003" FT /standard_name="OTTHUMP00000016342" FT /product="chromosome 6 open reading frame 64" FT /note="match: proteins: Sw:Q9NPB0" FT /protein_id="CAB71176.1" FT /translation="MEQRLAEFRAARKRAGLAAQPPAASQGAQTPGEKAEAAATLKAAP FT GWLKRFLVWKPRPASARAQPGLVQEAAQPQGSTSETPWNTAIPLPSCWDQSFLTNITFL FT KVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGCEAIQ FT GTLTAEQLERELQLRPLAGR" FT mRNA complement(join(39080851..39081496,39082659..39082847)) FT /gene="C6orf64" FT /locus_tag="RP1-202I21.6-002" FT /product="chromosome 6 open reading frame 64" FT /note="match: ESTs: Em:AL602007 Em:AL703783 Em:AL704158" FT CDS 39078097..39080728 FT /pseudo FT /locus_tag="RP1-202I21.5-001" FT /product="pseudogene similar to part of ankyrin repeat FT domain 30A ANKRD30A" FT /note="match: proteins: Sw:Q5TYW2 Sw:Q9BXX3 Sw:Q9UPS8 FT Tr:O60311 Tr:Q96IX9 Tr:Q9HCD1 Tr:Q9NSI9" FT mRNA complement(join(39071840..39073552,39077090..39077348)) FT /gene="C6orf64" FT /locus_tag="RP1-202I21.6-001" FT /product="chromosome 6 open reading frame 64" FT /note="match: ESTs: Em:AA115083 Em:AI123285 Em:AI361955 FT Em:AI765248 Em:AL582119 Em:AW882943 Em:BM727697 Em:BM996254 FT Em:N48234" FT /note="match: cDNAs: Em:AL136839" FT CDS complement(join(39073208..39073552,39077090..39077095)) FT /gene="C6orf64" FT /locus_tag="RP1-202I21.6-001" FT /standard_name="OTTHUMP00000016341" FT /product="chromosome 6 open reading frame 64" FT /note="match: proteins: Sw:Q9NPB0" FT /protein_id="CAD92546.1" FT /translation="MLEAAQPQGSTSETPWNTAIPLPSCWDQSFLTNITFLKVLLWLVL FT LGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGCEAIQGTLTAEQL FT ERELQLRPLAGR" FT polyA_signal complement(39072685..39072690) FT polyA_site complement(39072669) FT polyA_site complement(39072656) FT polyA_signal complement(39071866..39071871) FT polyA_site complement(39071848) FT polyA_site complement(39071839) FT polyA_site 39055519 FT polyA_signal 39055484..39055489 FT mRNA join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,AL353700.14:3027..3145, FT AL353700.14:4893..5095,AL353700.14:25167..25240, FT AL353700.14:27236..27388,AL353700.14:27949..28104, FT AL353700.14:35921..36037,AL353700.14:37781..37882, FT AL353700.14:43587..43747,38976590..38976746, FT 38979991..38980143,38980224..38980413,38994322..38994443, FT 38997881..38998295) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144987 FT Em:AA447518 Em:AA867753 Em:AF012381 Em:AI115336 Em:AI121650 FT Em:AI269674 Em:AI327324 Em:AI386463 Em:AI429155 Em:AI509627 FT Em:AI595507 Em:AI805281 Em:AL042262 Em:AL042677 Em:AV274650 FT Em:AW503176 Em:BB616572 Em:BB807691 Em:BE850216 Em:BI343679 FT Em:BI347037 Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356520 Em:AF356522" FT CDS join(AL391415.12:<64350..64703,AL391415.12:64841..64975, FT AL391415.12:71406..71490,AL035555.11:1501..1652, FT AL035555.11:4094..4283,AL035555.11:4836..4999, FT AL035555.11:8738..8914,AL035555.11:17503..17616, FT AL035555.11:22999..23106,AL035555.11:28729..28830, FT AL035555.11:37440..37586,AL035555.11:42781..42978, FT AL035555.11:45415..45491,AL035555.11:46993..47092, FT AL035555.11:48281..48400,AL035555.11:50031..50166, FT AL035555.11:53792..53979,AL035555.11:56830..56910, FT AL035555.11:57316..57432,AL035555.11:58582..58701, FT AL035555.11:70206..70338,AL035555.11:72508..72623, FT AL035555.11:74637..74743,AL035555.11:81081..81156, FT AL035555.11:82495..82684,AL035555.11:89865..90061, FT AL035555.11:90589..90715,AL035555.11:93183..93418, FT AL035555.11:95211..95315,AL035555.11:99349..99462, FT AL035555.11:101606..101668,AL035555.11:104969..105069, FT AL035555.11:109395..109532,AL035555.11:109690..109930, FT AL035555.11:112601..112800,AL035555.11:115675..115828, FT AL035555.11:117278..117441,AL035555.11:118599..118701, FT AL035555.11:119721..119825,AL035555.11:120213..120374, FT AL035555.11:124545..124769,AL035555.11:127484..127656, FT AL035555.11:129307..129485,AL034345.3:2104..2291, FT AL034345.3:4822..4908,AL034345.3:5000..5107, FT AL034345.3:6293..6427,AL034345.3:8632..8793, FT AL034345.3:10767..11013,AL034345.3:11137..11378, FT AL034345.3:11467..11607,AL034345.3:13822..14059, FT AL034345.3:21141..21283,AL034345.3:21553..21687, FT AL034345.3:22107..22229,AL034345.3:25022..25235, FT AL034345.3:28883..28992,AL034345.3:32932..33095, FT AL034345.3:34264..34456,AL034345.3:36489..36611, FT AL034345.3:38007..38137,AL034345.3:44485..44638, FT AL034345.3:46187..46351,AL034345.3:47749..47975, FT AL034345.3:49699..49817,AL034345.3:52080..52183, FT AL034345.3:53432..53608,AL034345.3:55470..55637, FT AL034345.3:56156..56371,AL034345.3:59600..59737, FT AL034345.3:61289..61416,AL034345.3:62222..62393, FT AL034345.3:64286..64441,AL034345.3:67742..67897, FT AL034345.3:70042..70224,AL034345.3:73823..73928, FT AL034345.3:76205..76457,AL034345.3:77029..77219, FT AL034345.3:83698..83819,AL353700.14:3027..3145, FT AL353700.14:4893..5095,AL353700.14:25167..25240, FT AL353700.14:27236..27388,AL353700.14:27949..28104, FT AL353700.14:35921..36037,AL353700.14:37781..37882, FT AL353700.14:43587..43747,38976590..38976746, FT 38979991..38980143,38980224..38980413,38994322..38994443, FT 38997881..38998168) FT /codon_start=1 FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-002" FT /standard_name="OTTHUMP00000017872" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: proteins: Tr:Q91XP8 Tr:Q91XQ0" FT /protein_id="CAI19770.1" FT /translation="GAEAPPSTEEAAPPRSEEEEAPRPPTVEAPAEDGFSPSAEDAVSS FT VVDYRDLIPSEEGIVLPDDHEADLNRVRQRLAPRPVQSVISEVLSLPSSRRSSRYRRSM FT SGLPNLQETLKERQARFREARESRRLKIDPSYKYIFEILAENLGLDIVTVEELILDCPS FT LEAFTNFFAKDGCKTLKFLYQEGDVPGIECGRTIAGATKGAKMMKLYIDNAAPDKLKGL FT CIFFVRCRNDVAINVKTIQEEALFTVLDASKGLLNGIRDMLANIFLPAVLATNNWGALN FT QSKQGESEKHIFTETINRYLSFLDGARISIEGTVKLKTIDNVNFSKLHTFEEVTAAASN FT SETVHQLEEVLMVWYKQIEQVLIESEQMRKEAGDSGPLTELEHWKRMSAKFNYIIEQIK FT GPSCKAVINVLNVAHSKLLKNWRDLDARITDTANESKDNVRYLYTLEKVCQPLYNHDLV FT SMAHGIQNLINAIRMIHGVSRYYNTSERMTSLFIKVTNQMVTACKAYITDGGLNHVWDQ FT ETPVVLKKIQDCIFLFKEYQASFHKTRKLISESSGEKSFEVSEMYIFGKFEAFCKRLEK FT ITEMITVVQTYSTLSNSTIEGIDIMAIKFRNIYQGVKKKQYDILDPRRTEFDTDFLDFM FT TKINGLEVQIQAFMNSSFGKILSSQQALQLLQRFQKLNIPCLGLEINHTIERILQYYVA FT ELDATKKLYHSQKDDPPLARNMPPIAGKILWVRQLYRRISEPINYFFKNSDILSSPDGK FT AVIRQYNKISYVLVEFEVVYHTAWIREISQLHYALQATLFVRHPETGKLLVNFDPKILE FT VVRETKCMIKMKLDVPEQAKRLLKLESKLKADKLYLQGLLQYYDELCQEVPSVFVNLMT FT PKMKKVESVLRQGLTVLTWSSLTLESFFQEVELVLDMFNQLLKKISDLCEMHIDTVLKE FT IAKTVLISLPESGATKVEDMLTLNETYTKEWADILNHKSKHVEEAVRELISIFEQIYEV FT KYTGKVGKQSEQRKHVVFGSETGEGENNDYEANIVNEFDTHDKEDEFKKECKEVFAFFS FT HQLLDSLQKATRLSLDTMKRRIFVASLYGRKQSEDIISFIKSEVHLAIPNVVMIPSLDD FT IQQAINRMIQLTLEVSRGVAHWGQQQIRPIKSVIPSPTTTDVTHQNTGKLLKKEERSFE FT EAIPARKLKNFYPGVAEHKDISKLVLLLSSSVNSLRKAAHEALQDFQKYKTLWTEDRDV FT KVKEFLANNPSLTEIRSEILHYATFEQEIDELKPIIVVGALELHTEPMKLALSIEAKAW FT KMLLCRYLNEEYKKKMSYMIAFINEYLKKLSRPIRDLDDVRFAMEALSCIRDNEIQMDM FT TLGPIEEAYAILNRFEVEVTKEESEAVDTLRYSFNKLQSKAVSVQEDLVQVQPKFKSNL FT LESVEVFREDVINFAEAYELEGPMVPNIPPQEASNRLQIFQASFDDLWRKFVTYSSGEQ FT LFGLPVTDYEVLHKTRKELNLLQKLYGLYDTVMSSISGYYEILWGDVDIEKINAELLEF FT QNRCRKLPKGLKDWQAFLDLKKRIDDFSESCPLLEMMTNKAMKQRHWDRISELTGTPFD FT VESDSFCLRNIMEAPLLKHKDDIEDICISAIKEKDIEAKLTQVIENWTNQNLSFAAFKG FT KGELLLKGTESGEIITLMEDSLMVLGSLLSNRYNAPFKKNIQNWVYKLSTSSDIIEEWL FT VVQNLWVYLEAVFVGGDIAKQLPQEAKRFQNIDKSWIKIMQRAHENPNVINCCVGDETM FT GQLLPHLHEQLEVCQKSLTGYLEKKRLLFPRFFFVSDPVLLEILGQASDSHTIQPHLPA FT VSDNINEVTFHAKDYDRIMAVISREGEKIVLDNSVMAKGPVEIWLLDLLKMQMSSLHNI FT IRSAFYQISDSGFQLLPFLSHFPAQVGLLGIQMLWTHDSEEALRNAKDDRKIMQVTNQK FT FLDILNTLISQTTHDLSKFDRVKFETLITIHVHQRDIFDDLVKMHIKSPTDFEWLKQSR FT FYFKEDLDQTVVSITDVDFIYQNEFLGCTDRLVITPLTDRCYITLAQALGMNMGGAPAG FT PAGTGKTETTKDMGRCLGKYVVVFNCSDQMDFRGLGRIFKGLAQSGSWGCFDEFNRIEL FT PVLSVAAQQIYIVLTARKERKKQFIFSDGDCVDLNPEFGIFLTMNPGYAGRQELPENLK FT IQFRTVAMMVPDRQIIMRVKLASCGFLENVILAQKFYVLYKLCEEQLTKQVHYDFGLRN FT ILSVLRTLGSQKRARPEDSELSIVMRGLRDMNLSKLVDEDEPLFLSLINDLFPGLQLDS FT NTYAELQNAVAHQVQIEGLINHPPWNLKLVQLYETSLVRHGLMTLGPSGSGKTTVITIL FT MKAQTECGRPHREMRMNPKAITAPQMFGRLDTATNDWTDGIFSTLWRKTLKAKKGENIF FT LILDGPVDAIWIENLNSVLDDNKTLTLANGDRIPMAPSCKLLFEVHNIENASPATVSRM FT GMVYISSSALSWRPILQAWLKKRTAQEAAVFLTLYEKVFEDTYTYMKLNLNPKMQLLEC FT NYIVQSLNLLEGLIPSKEEGGVSCVEHLHKLFVFGLMWSLGALLELESREKLEAFLRQH FT ESKLDLPEIPKGSNQTMYEFYVTDYGDWEHWNKKLQPYYYPTDSIPEYSSILVPNVDNI FT RTNFLIDTIAKQHKAVLLTGEQGTAKTVMVKAYLKKYDPEVQLSKSLNFSSATEPMMFQ FT RTIESYVDKRIGSTYGPPGGRKMTVFIDDINMPVINEWGDQITNEIVRQMMEMEGMYSL FT DKPGDFTTIVDVQLIAAMIHPGGGRNDIPQRLKRQFTVFNCTLPSNASIDKIFGIIGCG FT YFDPCRSFKPQICEMIVNLVSVGRVLWQWTKVKMLPTPSKFHYIFNLRDLSRIWQGMLT FT IKAEECASIPTLLSLFKHECSRVIADRFITPEDEQWFNAHLTRAVEENIGSDAASCILP FT EPYFVDFLREMPEPTGDEPEDSVFEVPKIYELMPSFDFLAEKLQFYQRQFNEIIRGTSL FT DLVFFKDAMTHLIKISRIIRTSCGNALLVGVGGSGKQSLSRLASFIAGYQIFQITLTRS FT YNVTNLTDDLKALYKVAGADGKGITFIFTDSEIKDEAFLEYLNNLLSSGEISNLFARDE FT MDEITQGLISVMKRELPRHPPTFDNLYEYFISRSRKNLHVVLCFSPVGEKFRARSLKFP FT GLISGCTMDWFSRWPREALIAVASYFLSDYNIVCSSEIKRQVVETMGLFHDMVSESCES FT YFQRYRRRAHVTPKSYLSFINGYKNIYAEKVKFINEQAERMNIGLDKLMEASESVAKLS FT QDLAVKEKELAVASIKADEVLAEVTVSAQASAKIKNEVQEVKDKAQKIVDEIDSEKVKA FT ESKLEAAKPALEEAEAALNTIKPNDIATVRKLAKPPHLIMRIMDCVLLLFQKKIDPVTM FT DPEKSCCKPSWGESLKLMSATGFLWSLQQFPKDTINEETVELLQPYFNMDDYTFESAKK FT VCGNVAGLLSWTLAMAIFYGINREVLPLKANLAKQEGRLAVANAELGKAQALLDEKQAE FT LDKVQAKFDAAMNEKMDLLNDADTCRKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINR FT LVGDILLCTGFLSYLGPFNQIFRNYLLKDQWEMELRARKIPFTENLNLISMLVDPPTIG FT EWGLQGLPGDDLSIQNGIIVTKATRYPLLIDPQTQGKTWIKSKEKENDLQVTSLNHKYF FT RTHLEDSLSLGRPLLIEDIHEELDPALDNVLEKNFIKSGTTFKVKVGDKECDIMDTFKL FT YITTKLPNPAFTPEINAKTSVIDFTVTMKGLENQLLRRVILTEKQELEAERVKLLEDVT FT FNKRKMKELEDNLLYKLSATKGSLVDDESLIGVLRTTKQTAAEVSEKLHVAAETEIKIN FT AAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQFLKLFDQSMARSEKSPLPQKRIT FT NIIEYLTYEVFTYSVRGLYENHKFLFVLLMTLKIDLQRGTVKHREFQALIKGGAALDLK FT ACPPKPYRWILDMTWLNLVELSKLPQFAEIMNQISRNEKGWKSWFDKDAPEEEIIPDGY FT NDSLDTCHKLLLIRSWCPDRTVFQARKYIADSLEEKYTEPVILNLEKTWEESDTRTPLI FT CFLSMGSDPTNQIDALAKKLKLECRTISMGQGQEVHARKLIQMSMQQGGWVLLQNCHLG FT LEFMEELLETLITTEASDDSFRVWITTEPHDRFPITLLQTSLKFTNEPPQGVRAGLKRT FT FAGINQDLLDISNLPMWKPMLYTVAFLHSTVQERRKFGPLGWNIPYEFNSADFSASVQF FT IQNHLDECDIKKGVSWNTVRYMIGEVQYGGRVTDDFDKRLLNCFARVWFSEKMFEPSFC FT FYTGYKIPLCKTLDQYFEYIQSLPSLDNPEVFGLHPNADITYQSNTASAVLETITNIQP FT KESGGGVGETREAIVYRLSEDMLSKLPPDYIPHEVKSRLIKMGHLNSMNIFLRQEIDRM FT QRVISILRSSLSDLKLAIEGTIIMSENLRDALDNMYDARIPQLWKRVSWDSSTLGFWFT FT ELLERNAQFSTWIFEGRPNVFWMTGFFNPQGFLTAMRQEVTRAHKGWALDTVTIHNEVL FT RQTKEEITSPPGEGVYIYGLYMDGAAWDRRNGKLMESTPKVLFTQLPVLHIFAINSTAP FT KDPKLYVCPIYKKPRRTDLTFITVVYLRTVLSPDHWILRGVALLCDIK" FT mRNA join(AL391415.12:64626..64703,AL391415.12:64841..64975, FT AL035555.11:1501..1652,AL035555.11:4094..4283, FT AL035555.11:4836..4999,AL035555.11:8738..8914, FT AL035555.11:17503..17616,AL035555.11:22999..23106, FT AL035555.11:28729..28830,AL035555.11:37440..37586, FT AL035555.11:42781..42978,AL035555.11:45415..45491, FT AL035555.11:46993..47092,AL035555.11:48281..48400, FT AL035555.11:50031..50166,AL035555.11:53792..53979, FT AL035555.11:56830..56910,AL035555.11:57316..57432, FT AL035555.11:58582..58701,AL035555.11:70206..70338, FT AL035555.11:72508..72623,AL035555.11:74637..74743, FT AL035555.11:81081..81156,AL035555.11:82495..82684, FT AL035555.11:89865..90061,AL035555.11:90589..90715, FT AL035555.11:93183..93418,AL035555.11:95211..95315, FT AL035555.11:99349..99462,AL035555.11:101606..101668, FT AL035555.11:104969..105069,AL035555.11:109395..109532, FT AL035555.11:109690..109930,AL035555.11:112601..112800, FT AL035555.11:115675..115828,AL035555.11:117278..117441, FT AL035555.11:118599..118701,AL035555.11:119721..119825, FT AL035555.11:120213..120374,AL035555.11:124545..124769, FT AL035555.11:127484..127656,AL035555.11:129307..129485, FT AL034345.3:2104..2291,AL034345.3:4822..4908, FT AL034345.3:5000..5107,AL034345.3:6293..6427, FT AL034345.3:8632..8793,AL034345.3:10767..11013, FT AL034345.3:11137..11378,AL034345.3:11467..11607, FT AL034345.3:13822..14059,AL034345.3:21141..21283, FT AL034345.3:21553..21687,AL034345.3:22107..22229, FT AL034345.3:25022..25235,AL034345.3:28883..28992, FT AL034345.3:32932..33095,AL034345.3:34264..34456, FT AL034345.3:36489..36611,AL034345.3:38007..38137, FT AL034345.3:44485..44638,AL034345.3:46187..46351, FT AL034345.3:47749..47975,AL034345.3:49699..49817, FT AL034345.3:52080..52183,AL034345.3:53432..53608, FT AL034345.3:55470..55637,AL034345.3:56156..56371, FT AL034345.3:59600..59737,AL034345.3:61289..61416, FT AL034345.3:62222..62393,AL034345.3:64286..64441, FT AL034345.3:67742..67897,AL034345.3:70042..70224, FT AL034345.3:73823..73928,AL034345.3:76205..76457, FT AL034345.3:77029..77219,AL034345.3:83698..83819, FT AL353700.14:3027..3145,AL353700.14:4893..5095, FT AL353700.14:25167..25240,AL353700.14:27236..27388, FT AL353700.14:27949..28104,AL353700.14:35921..36037, FT AL353700.14:37781..37882,AL353700.14:43587..43747, FT 38976590..38976746,38979991..38980143,38980224..38980413, FT 38994322..38994443,38997881..38998301) FT /gene="DNAH8" FT /locus_tag="RP1-202I21.7-001" FT /product="dynein, axonemal, heavy chain 8" FT /note="match: ESTs: Em:AA089110 Em:AA117561 Em:AA144622 FT Em:AA144987 Em:AA447518 Em:AA867753 Em:AF012380 Em:AF012381 FT Em:AI115336 Em:AI121650 Em:AI269674 Em:AI326136 Em:AI327324 FT Em:AI386463 Em:AI429155 Em:AI509627 Em:AI595507 Em:AI805281 FT Em:AL042262 Em:AL042677 Em:AV274650 Em:AW503176 Em:BB616572 FT Em:BB807691 Em:BE850216 Em:BI343679 Em:BI347037 Em:BM021539 FT Em:C94838 Em:D77466" FT /note="match: cDNAs: Em:AF356519" FT mRNA join(39016574..39016694,39024173..39024269, FT 39025248..39025355,39033487..39033605,39033973..39034079, FT 39040638..39040791,39041386..39041545,39046098..39046158, FT 39046733..39046802,39046888..39046976,39047340..39047478, FT 39048474..39048515,39053682..39055519) FT /gene="GLP1R" FT /locus_tag="RP1-202I21.1-001" FT /product="glucagon-like peptide 1 receptor" FT /note="match: ESTs: Em:BG675444 Em:BI342393" FT /note="match: cDNAs: Em:AJ001692 Em:L23503 Em:M97797 FT Em:S75952 Em:U01104 Em:U01156 Em:U01157 Em:U10037" FT CDS join(39016617..39016694,39024173..39024269, FT 39025248..39025355,39033487..39033605,39033973..39034079, FT 39040638..39040791,39041386..39041545,39046098..39046158, FT 39046733..39046802,39046888..39046976,39047340..39047478, FT 39048474..39048515,39053682..39053849) FT /gene="GLP1R" FT /locus_tag="RP1-202I21.1-001" FT /standard_name="OTTHUMP00000016340" FT /product="glucagon-like peptide 1 receptor" FT /note="match: proteins: Sw:O35659 Sw:O95838 Sw:P32301 FT Sw:P43220" FT /protein_id="CAB71177.1" FT /translation="MAGAPGPLRLALLLLGMVGRAGPRPQGATVSLWETVQKWREYRRQ FT CQRSLTEDPPPATDLFCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRFC FT TAEGLWLQKDNSSLPWRDLSECEESKRGERSSPEEQLLFLYIIYTVGYALSFSALVIAS FT AILLGFRHLHCTRNYIHLNLFASFILRALSVFIKDAALKWMYSTAAQQHQWDGLLSYQD FT SLSCRLVFLLMQYCVAANYYWLLVEGVYLYTLLAFSVLSEQWIFRLYVSIGWGVPLLFV FT VPWGIVKYLYEDEGCWTRNSNMNYWLIIRLPILFAIGVNFLIFVRVICIVVSKLKANLM FT CKTDIKCRLAKSTLTLIPLLGTHEVIFAFVMDEHARGTLRFIKLFTELSFTSFQGLMVA FT ILYCFVNNEVQLEFRKSWERWRLEHLHIQRDSSMKPLKCPTSSLSSGATAGSSMYTATC FT QASCS" FT CDS complement(39007379..39007761) FT /pseudo FT /locus_tag="RP1-202I21.3-001" FT /product="40S ribosomal protein S2 (RPS2) pseudogene" FT /note="match: proteins: Em:CE04237 Sw:O18789 Sw:P15880 FT Sw:P25444 Sw:P27952 Sw:P31009 Sw:P46791 Sw:P49154 Sw:P49688 FT Tr:O35805 Tr:O55213 Tr:O89072" FT polyA_site 38998305 FT polyA_signal 38998283..38998288 FT misc_feature complement(38970711) FT /note="Clone_left_end: RP1-202I21" FT misc_feature 39113276..39215016 FT /note="annotated region of clone" FT polyA_site complement(39156749) FT polyA_signal complement(39156766..39156771) FT mRNA complement(join(39156749..39159531,39161945..39162113, FT 39162370..39162536,39163652..39163763,39196702..39197226)) FT /gene="KCNK5" FT /locus_tag="RP11-136C6.1-001" FT /product="potassium channel, subfamily K, member 5" FT /note="match: ESTs: Em:AA568192 Em:AI299266 Em:AI300687 FT Em:AI678413 Em:AI702485 Em:AW298669 Em:AW772313 Em:BB838615 FT Em:BB846815 Em:BB848129 Em:BF384607 Em:BF436305 Em:BF589993 FT Em:BF786528 Em:BG174065 Em:BI251313 Em:BI645950 Em:BM146463 FT Em:BM147446 Em:H01932 Em:R25184" FT /note="match: cDNAs: Em:AF084830.1 Em:AF259395.1 FT Em:AF319542.1" FT CDS complement(join(39158666..39159531,39161945..39162113, FT 39162370..39162536,39163652..39163763,39196702..39196887)) FT /gene="KCNK5" FT /locus_tag="RP11-136C6.1-001" FT /standard_name="OTTHUMP00000016343" FT /product="potassium channel, subfamily K, member 5" FT /note="match: proteins: Sw:O95279 Sw:P97438 Sw:Q96T54 FT Tr:Q924I4 Tr:Q9ERU5 Tr:Q9JK62 Tr:Q9NRT2" FT /protein_id="CAH70466.1" FT /translation="MVDRGPLLTSAIIFYLAIGAAIFEVLEEPHWKEAKKNYYTQKLHL FT LKEFPCLGQEGLDKILEVVSDAAGQGVAITGNQTFNNWNWPNAMIFAATVITTIGYGNV FT APKTPAGRLFCVFYGLFGVPLCLTWISALGKFFGGRAKRLGQFLTKRGVSLRKAQITCT FT VIFIVWGVLVHLVIPPFVFMVTEGWNYIEGLYYSFITISTIGFGDFVAGVNPSANYHAL FT YRYFVELWIYLGLAWLSLFVNWKVSMFVEVHKAIKKRRRRRKESFESSPHSRKALQVKG FT STASKDVNIFSFLSKKEETYNDLIKQIGKKAMKTSGGGETGPGPGLGPQGGGLPALPPS FT LVPLVVYSKNRVPTLEEVSQTLRSKGHVSRSPDEEAVARAPEDSSPAPEVFMNQLDRIS FT EECEPWDAQDYHPLIFQDASITFVNTEAGLSDEETSKSSLEDNLAGEESPQQGAEAKAP FT LNMGEFPSSSESTFTSTESELSVPYEQLMNEYNKANSPKGT" FT misc_feature 39214817 FT /note="Clone_left_end: RP1-137F1" FT misc_feature 39215017..39355052 FT /note="annotated region of clone" FT mRNA complement(join(39302876..39304324,39311485..39311591, FT 39313476..39313565,39325053..39325150,39328171..39328306, FT 39330210..39330294,39353398..39353448, FT AL160161.10:32772..32827,AL160161.10:43877..44198)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-006" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:AK123217.1" FT CDS complement(join(39304308..39304324,39311485..39311591, FT 39313476..39313565,39325053..39325150,39328171..39328306, FT 39330210..39330294,39353398..39353448, FT AL160161.10:32772..32827,AL160161.10:43877..43983)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-006" FT /standard_name="OTTHUMP00000164049" FT /product="kinesin family member 6" FT /protein_id="CAJ58471.1" FT /translation="MREEMSLGCQEAFEIFKRDHADSVTIDDNKQILKQRFSEAKALGE FT SINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQEEKLRSQLEEEKRRYKTM FT FTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQVNSPAVNSLDHTKPFLQT FT SDSQHEWSQLLSNKSDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGD FT SQTDSDIIAFIKARQSILQKQCLGSN" FT mRNA complement(join(39303930..39304324,39311485..39311591, FT 39313476..39313565,39314252..39314302,39325053..39325150, FT 39328171..39328306,39330210..39330294,39353398..39353448, FT AL160161.10:32772..32827,AL160161.10:43877..44137)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-007" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:BC022074.2" FT CDS complement(join(39304308..39304324,39311485..39311591, FT 39313476..39313565,39314252..39314302,39325053..39325150, FT 39328171..39328306,39330210..39330294,39353398..39353448, FT AL160161.10:32772..32827,AL160161.10:43877..43983)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-007" FT /standard_name="OTTHUMP00000164050" FT /product="kinesin family member 6" FT /protein_id="CAI19535.1" FT /translation="MREEMSLGCQEAFEIFKRDHADSVTIDDNKQILKQRFSEAKALGE FT SINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQEEKLRSQLEEEKRRYKTM FT FTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQVNSPAVNSLDHTKPFLQT FT SDSQHEWSQLLSNKSSGGWEVQDQGTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPL FT EDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLGSN" FT polyA_site complement(39266777) FT polyA_signal complement(39266796..39266801) FT mRNA join(complement(AL590387.7:54107..>54180), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(39353398..39353448), FT complement(39330210..39330294), FT complement(39328171..39328306), FT complement(39325053..39325150), FT complement(39313476..39313565), FT complement(39311485..39311591), FT complement(39297766..39304324)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:BX649045.1" FT CDS join(complement(AL590387.7:54107..>54180), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(39353398..39353448), FT complement(39330210..39330294), FT complement(39328171..39328306), FT complement(39325053..39325150), FT complement(39313476..39313565), FT complement(39311485..39311591), FT complement(39304308..39304324)) FT /codon_start=3 FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /standard_name="OTTHUMP00000164048" FT /product="kinesin family member 6" FT /protein_id="CAJ58472.1" FT /translation="GAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGY FT DLLDPRHEASSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAE FT TPMNQASTRSHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKY FT INLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDE FT SISTCRFAQRVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEA FT ELLQLEKLITSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKD FT QDCQEPLKEEEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQS FT PPFRLGNPEEGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKR FT DHADSVTIDDNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENM FT AVPLMPDQQEEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVW FT WAEEATNLQVNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSDVNARKILPSPCPSPHS FT QKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLGSN" FT mRNA complement(join(39266777..39267513,39271733..39271907, FT 39272271..39272431,39278669..39278783,39281860..39282198)) FT /gene="KCNK17" FT /locus_tag="RP1-137F1.6-001" FT /product="potassium channel, subfamily K, member 17" FT /note="match: ESTs: Em:BF352053 Em:BI524180 Em:BQ267373 FT Em:BQ272607" FT /note="match: cDNAs: Em:AF065163.1 Em:AF247042.1 FT Em:AF248242.1 Em:AF259500.1 Em:AF259501.1 Em:AF339912.1 FT Em:AF358910.1 Em:BC025726" FT CDS complement(join(39267203..39267513,39271733..39271907, FT 39272271..39272431,39278669..39278783,39281860..39282096)) FT /gene="KCNK17" FT /locus_tag="RP1-137F1.6-001" FT /standard_name="OTTHUMP00000016346" FT /product="potassium channel, subfamily K, member 17" FT /note="match: proteins: Sw:P34410 Sw:Q94526 Sw:Q96T54 FT Sw:Q9Y2U2 Tr:Q9JK62 Tr:Q9UL14" FT /protein_id="CAI19536.1" FT /translation="MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEG FT RAAQDSSRSFQRDKWELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELV FT GSFFFSVSTITTIGYGNLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWA FT SRLGGTWQDPDKARWLAGSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTV FT GFGDYVIGMNPSQRYPLWYKNMVSLWILFGMAWLALIIKLILSQLETPGRVCSCCHHSS FT KEDFKSQSWRQGPDREPESHSPQQGCYPEGPMGIIQHLEPSAHAAGCGKDS" FT polyA_site complement(39282482) FT polyA_signal complement(39282495..39282500) FT misc_feature 39289150 FT /note="Clone_left_end: RP1-188D3" FT mRNA complement(join(39282481..39282905,39284078..39284218, FT 39284558..39284723,39285562..39285728,39286795..39286909, FT 39290104..39290316)) FT /gene="KCNK16" FT /locus_tag="RP1-137F1.5-001" FT /product="potassium channel, subfamily K, member 16" FT /note="match: ESTs: Em:B1711434" FT /note="match: cDNAs: Em:AF022819.1 Em:AF033017.1 FT Em:AF358909.1 Em:AK014626.1 Em:BC003729.1" FT CDS complement(join(39282778..39282905,39284078..39284218, FT 39284558..39284723,39285562..39285728,39286795..39286909, FT 39290104..39290316)) FT /gene="KCNK16" FT /locus_tag="RP1-137F1.5-001" FT /standard_name="OTTHUMP00000016345" FT /product="potassium channel, subfamily K, member 16" FT /note="match: proteins: Sw:O00180 Sw:Q96T55 Sw:Q9Y257 FT Sw:Q9Z2T1 Tr:O02821 Tr:Q9NEV3" FT /protein_id="CAI19537.1" FT /translation="MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRD FT QFQLEKLRFLENYTCLDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGT FT VVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRR FT SQVLQVLGLALFLTLGTLVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGT FT DPSKHYISVYRSLAAIWILLGLAWLALILPLGPLLLHRCCQLWLLSLRQGCGAKAAPGR FT RPRRGSTAARGVQVTPQDFPISKKGLGS" FT polyA_site complement(39297766) FT polyA_signal complement(39297782..39297787) FT polyA_site complement(39303926) FT polyA_site complement(39303927) FT polyA_signal complement(39303952..39303957) FT mRNA join(AL161439.15:92601..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314, FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(39353398..39353448), FT complement(39330210..39330294), FT complement(39328171..39328306), FT complement(39325053..39325150), FT complement(39314252..39314302), FT complement(39313476..39313565), FT complement(39311485..39311591), FT complement(39297766..39304324)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:BG189781 Em:BG189781.1 Em:BG715118 FT Em:BG715118.1 Em:BI118088 Em:BI118088.1 Em:BM042034 FT Em:BM042034.1 Em:BM667917.1" FT /note="match: cDNAs: Em:AK043404.1 Em:AK123217.1 FT Em:AK131471.1 Em:AL832634.2 Em:BC022074" FT CDS join(AL161439.15:92696..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314, FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(39353398..39353448), FT complement(39330210..39330294), FT complement(39328171..39328306), FT complement(39325053..39325150), FT complement(39314252..39314302), FT complement(39313476..39313565), FT complement(39311485..39311591), FT complement(39304308..39304324)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /standard_name="OTTHUMP00000016348" FT /product="kinesin family member 6" FT /note="match: proteins: Sw:Q6ZMV9" FT /protein_id="CAJ58473.1" FT /translation="MVKQTIQIFARVKPPVRKHQQGIYSIDEDEKLIPSLEIILPRDLA FT DGFVNNKRESYKFKFQRIFDQDANQETVFENIAKPVAGSVLAGYNGTIFAYGQTGSGKT FT FTITGGAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGYDLLDPRHEA FT SSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAETPMNQASTR FT SHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKYINLSLHYLE FT QVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDESISTCRFAQ FT RVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLI FT TSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKDQDCQEPLKE FT EEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQSPPFRLGNPE FT EGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKRDHADSVTID FT DNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQ FT EEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQ FT VNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSSGGWEVQDQGTGRFDVCDVNARKILP FT SPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLG FT SN" FT CDS 39321523..39321948 FT /pseudo FT /locus_tag="RP1-137F1.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q53RE8" FT misc_feature 39354952 FT /note="Clone_right_end: RP1-137F1" FT misc_feature 39355053..39427111 FT /note="annotated region of clone" FT mRNA complement(join(AL136087.12:87960..89408, FT AL136087.12:96569..96675,AL136087.12:98560..98649, FT AL136087.12:110137..110234,AL136087.12:113255..113390, FT AL136087.12:115294..115378,AL136087.12:138482..138532, FT 39387724..39387779,39398829..39399150)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-006" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:AK123217.1" FT CDS complement(join(AL136087.12:89392..89408, FT AL136087.12:96569..96675,AL136087.12:98560..98649, FT AL136087.12:110137..110234,AL136087.12:113255..113390, FT AL136087.12:115294..115378,AL136087.12:138482..138532, FT 39387724..39387779,39398829..39398935)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-006" FT /standard_name="OTTHUMP00000164049" FT /product="kinesin family member 6" FT /protein_id="CAJ58474.1" FT /translation="MREEMSLGCQEAFEIFKRDHADSVTIDDNKQILKQRFSEAKALGE FT SINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQEEKLRSQLEEEKRRYKTM FT FTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQVNSPAVNSLDHTKPFLQT FT SDSQHEWSQLLSNKSDVNARKILPSPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGD FT SQTDSDIIAFIKARQSILQKQCLGSN" FT mRNA complement(join(AL136087.12:89014..89408, FT AL136087.12:96569..96675,AL136087.12:98560..98649, FT AL136087.12:99336..99386,AL136087.12:110137..110234, FT AL136087.12:113255..113390,AL136087.12:115294..115378, FT AL136087.12:138482..138532,39387724..39387779, FT 39398829..39399089)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-007" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:BC022074.2" FT CDS complement(join(AL136087.12:89392..89408, FT AL136087.12:96569..96675,AL136087.12:98560..98649, FT AL136087.12:99336..99386,AL136087.12:110137..110234, FT AL136087.12:113255..113390,AL136087.12:115294..115378, FT AL136087.12:138482..138532,39387724..39387779, FT 39398829..39398935)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-007" FT /standard_name="OTTHUMP00000164050" FT /product="kinesin family member 6" FT /protein_id="CAI19716.1" FT /translation="MREEMSLGCQEAFEIFKRDHADSVTIDDNKQILKQRFSEAKALGE FT SINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQEEKLRSQLEEEKRRYKTM FT FTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQVNSPAVNSLDHTKPFLQT FT SDSQHEWSQLLSNKSSGGWEVQDQGTGRFDVCDVNARKILPSPCPSPHSQKQSSTSTPL FT EDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLGSN" FT mRNA join(complement(AL590387.7:54107..>54180), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(39398829..39398937), FT complement(39387724..39387779), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:82850..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:BX649045.1" FT CDS join(complement(AL590387.7:54107..>54180), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(39398829..39398937), FT complement(39387724..39387779), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:89392..89408)) FT /codon_start=3 FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /standard_name="OTTHUMP00000164048" FT /product="kinesin family member 6" FT /protein_id="CAJ58475.1" FT /translation="GAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGY FT DLLDPRHEASSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAE FT TPMNQASTRSHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKY FT INLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDE FT SISTCRFAQRVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEA FT ELLQLEKLITSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKD FT QDCQEPLKEEEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQS FT PPFRLGNPEEGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKR FT DHADSVTIDDNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENM FT AVPLMPDQQEEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVW FT WAEEATNLQVNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSDVNARKILPSPCPSPHS FT QKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLGSN" FT misc_feature 39426912 FT /note="Clone_left_end: RP5-1043E3" FT mRNA join(AL161439.15:92601..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314, FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(39398829..39398937), FT complement(39387724..39387779), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:82850..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:BG189781 Em:BG189781.1 Em:BG715118 FT Em:BG715118.1 Em:BI118088 Em:BI118088.1 Em:BM042034 FT Em:BM042034.1 Em:BM667917.1" FT /note="match: cDNAs: Em:AK043404.1 Em:AK123217.1 FT Em:AK131471.1 Em:AL832634.2 Em:BC022074" FT CDS join(AL161439.15:92696..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314, FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(39398829..39398937), FT complement(39387724..39387779), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:89392..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /standard_name="OTTHUMP00000016348" FT /product="kinesin family member 6" FT /note="match: proteins: Sw:Q6ZMV9" FT /protein_id="CAJ58476.1" FT /translation="MVKQTIQIFARVKPPVRKHQQGIYSIDEDEKLIPSLEIILPRDLA FT DGFVNNKRESYKFKFQRIFDQDANQETVFENIAKPVAGSVLAGYNGTIFAYGQTGSGKT FT FTITGGAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGYDLLDPRHEA FT SSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAETPMNQASTR FT SHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKYINLSLHYLE FT QVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDESISTCRFAQ FT RVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLI FT TSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKDQDCQEPLKE FT EEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQSPPFRLGNPE FT EGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKRDHADSVTID FT DNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQ FT EEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQ FT VNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSSGGWEVQDQGTGRFDVCDVNARKILP FT SPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLG FT SN" FT misc_feature complement(39427112..39553379) FT /note="annotated region of clone" FT polyA_signal complement(39550965..39550970) FT polyA_site complement(39550951) FT CDS complement(join(39551208..39551255,39552674..39552760, FT AL590387.7:758..901,AL590387.7:10551..>10757)) FT /codon_start=1 FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-002" FT /standard_name="OTTHUMP00000164045" FT /product="kinesin family member 6" FT /protein_id="CAI42129.1" FT /translation="TPMNQASTRSHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVA FT KTGVGGHLLTEAKYINLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTT FT MIATLSLEKRNLDESISTCRFAQRVALIKNEAVLNEEINPRLKAPSSSDGVLFCRNQ" FT mRNA complement(join(39550951..39551255,39552674..39552760, FT AL590387.7:758..901,AL590387.7:10551..>10757)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-002" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:AI222076.1" FT CDS complement(39521587..39522719) FT /pseudo FT /locus_tag="RP5-1043E3.1-001" FT /product="E2F trasnscription factor 4 (E2F4) pseudogene" FT mRNA complement(join(AL136087.12:82850..89408, FT AL136087.12:96569..96675,AL136087.12:98560..98649, FT AL136087.12:110137..110234,AL136087.12:113255..113390, FT AL136087.12:115294..115378,AL136087.12:138482..138532, FT AL160161.10:32772..32827,AL160161.10:43877..43985, FT 39507779..39507997,39512331..39512469,39513359..39513464, FT 39545832..39545935,39552674..39552760,AL590387.7:758..901, FT AL590387.7:10551..10757,AL590387.7:27686..27815, FT AL590387.7:49346..49455,AL590387.7:54107..>54180)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:BX649045.1" FT CDS complement(join(AL136087.12:89392..89408, FT AL136087.12:96569..96675,AL136087.12:98560..98649, FT AL136087.12:110137..110234,AL136087.12:113255..113390, FT AL136087.12:115294..115378,AL136087.12:138482..138532, FT AL160161.10:32772..32827,AL160161.10:43877..43985, FT 39507779..39507997,39512331..39512469,39513359..39513464, FT 39545832..39545935,39552674..39552760,AL590387.7:758..901, FT AL590387.7:10551..10757,AL590387.7:27686..27815, FT AL590387.7:49346..49455,AL590387.7:54107..>54180)) FT /codon_start=3 FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /standard_name="OTTHUMP00000164048" FT /product="kinesin family member 6" FT /protein_id="CAJ58469.1" FT /translation="GAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGY FT DLLDPRHEASSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAE FT TPMNQASTRSHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKY FT INLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDE FT SISTCRFAQRVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEA FT ELLQLEKLITSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKD FT QDCQEPLKEEEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQS FT PPFRLGNPEEGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKR FT DHADSVTIDDNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENM FT AVPLMPDQQEEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVW FT WAEEATNLQVNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSDVNARKILPSPCPSPHS FT QKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLGSN" FT mRNA join(AL161439.15:92601..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314, FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901), FT complement(39552674..39552760), FT complement(39545832..39545935), FT complement(39513359..39513464), FT complement(39512331..39512469), FT complement(39507779..39507997), FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:82850..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:BG189781 Em:BG189781.1 Em:BG715118 FT Em:BG715118.1 Em:BI118088 Em:BI118088.1 Em:BM042034 FT Em:BM042034.1 Em:BM667917.1" FT /note="match: cDNAs: Em:AK043404.1 Em:AK123217.1 FT Em:AK131471.1 Em:AL832634.2 Em:BC022074" FT CDS join(AL161439.15:92696..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314, FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901), FT complement(39552674..39552760), FT complement(39545832..39545935), FT complement(39513359..39513464), FT complement(39512331..39512469), FT complement(39507779..39507997), FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:89392..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /standard_name="OTTHUMP00000016348" FT /product="kinesin family member 6" FT /note="match: proteins: Sw:Q6ZMV9" FT /protein_id="CAJ58470.1" FT /translation="MVKQTIQIFARVKPPVRKHQQGIYSIDEDEKLIPSLEIILPRDLA FT DGFVNNKRESYKFKFQRIFDQDANQETVFENIAKPVAGSVLAGYNGTIFAYGQTGSGKT FT FTITGGAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGYDLLDPRHEA FT SSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAETPMNQASTR FT SHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKYINLSLHYLE FT QVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDESISTCRFAQ FT RVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLI FT TSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKDQDCQEPLKE FT EEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQSPPFRLGNPE FT EGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKRDHADSVTID FT DNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQ FT EEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQ FT VNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSSGGWEVQDQGTGRFDVCDVNARKILP FT SPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLG FT SN" FT misc_feature complement(39427112) FT /note="Clone_left_end: RP5-1043E3" FT misc_feature 39553380..39629354 FT /note="annotated region of clone" FT CDS join(complement(39563830..>39564036), FT complement(39554037..39554180),AL035464.20:620..706, FT AL035464.20:2125..2172) FT /codon_start=1 FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-002" FT /standard_name="OTTHUMP00000164045" FT /product="kinesin family member 6" FT /protein_id="CAI42690.1" FT /translation="TPMNQASTRSHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVA FT KTGVGGHLLTEAKYINLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTT FT MIATLSLEKRNLDESISTCRFAQRVALIKNEAVLNEEINPRLKAPSSSDGVLFCRNQ" FT mRNA join(complement(39563830..>39564036), FT complement(39554037..39554180),AL035464.20:620..706, FT AL035464.20:2125..2429) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-002" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:AI222076.1" FT misc_feature 39574648..39574698 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 39593018..39593259 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 39593530..39593547 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(complement(39607386..>39607459), FT complement(39602625..39602734), FT complement(39580965..39581094), FT complement(39563830..39564036), FT complement(39554037..39554180),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:82850..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /product="kinesin family member 6" FT /note="match: cDNAs: Em:BX649045.1" FT CDS join(complement(39607386..>39607459), FT complement(39602625..39602734), FT complement(39580965..39581094), FT complement(39563830..39564036), FT complement(39554037..39554180),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:89392..89408)) FT /codon_start=3 FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-005" FT /standard_name="OTTHUMP00000164048" FT /product="kinesin family member 6" FT /protein_id="CAJ58478.1" FT /translation="GAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGY FT DLLDPRHEASSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAE FT TPMNQASTRSHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKY FT INLSLHYLEQVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDE FT SISTCRFAQRVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEA FT ELLQLEKLITSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKD FT QDCQEPLKEEEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQS FT PPFRLGNPEEGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKR FT DHADSVTIDDNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENM FT AVPLMPDQQEEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVW FT WAEEATNLQVNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSDVNARKILPSPCPSPHS FT QKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLGSN" FT misc_feature 39629155 FT /note="Clone_left_end: RP11-505E17" FT mRNA join(AL161439.15:92601..92761,AL161439.15:97195..97304, FT AL161439.15:99429..99584,AL161439.15:103240..103314, FT complement(39607454..39607533)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-004" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:CD684245.1" FT mRNA join(AL161439.15:92601..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314,complement(39607386..39607533), FT complement(39602625..39602734), FT complement(39580965..39581094), FT complement(39563830..39564036), FT complement(39554037..39554180),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:82850..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:BG189781 Em:BG189781.1 Em:BG715118 FT Em:BG715118.1 Em:BI118088 Em:BI118088.1 Em:BM042034 FT Em:BM042034.1 Em:BM667917.1" FT /note="match: cDNAs: Em:AK043404.1 Em:AK123217.1 FT Em:AK131471.1 Em:AL832634.2 Em:BC022074" FT CDS join(AL161439.15:92696..92761,AL161439.15:97195..97304, FT AL161439.15:103240..103314,complement(39607386..39607533), FT complement(39602625..39602734), FT complement(39580965..39581094), FT complement(39563830..39564036), FT complement(39554037..39554180),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:89392..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /standard_name="OTTHUMP00000016348" FT /product="kinesin family member 6" FT /note="match: proteins: Sw:Q6ZMV9" FT /protein_id="CAJ58479.1" FT /translation="MVKQTIQIFARVKPPVRKHQQGIYSIDEDEKLIPSLEIILPRDLA FT DGFVNNKRESYKFKFQRIFDQDANQETVFENIAKPVAGSVLAGYNGTIFAYGQTGSGKT FT FTITGGAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGYDLLDPRHEA FT SSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAETPMNQASTR FT SHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKYINLSLHYLE FT QVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDESISTCRFAQ FT RVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLI FT TSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKDQDCQEPLKE FT EEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQSPPFRLGNPE FT EGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKRDHADSVTID FT DNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQ FT EEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQ FT VNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSSGGWEVQDQGTGRFDVCDVNARKILP FT SPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLG FT SN" FT misc_feature complement(39629355..39785781) FT /note="annotated region of clone" FT mRNA join(39760794..39760919,AL590999.7:3938..4161, FT AL590999.7:8619..8708,AL590999.7:12124..12198, FT AL590999.7:12671..12765,AL590999.7:15201..15534, FT AL590999.7:16514..16624,AL590999.7:18031..18134, FT AL590999.7:19197..19263,AL590999.7:20929..21046, FT AL590999.7:23021..23159,AL590999.7:25894..25952, FT AL590999.7:26095..26279,AL590999.7:26869..27168, FT AL590999.7:31653..31760,AL590999.7:35177..35283, FT AL590999.7:36370..36454,AL590999.7:39032..39138, FT AL590999.7:39325..39413,AL590999.7:44503..44671, FT AL590999.7:44866..44973,AL590999.7:46568..46628, FT AL590999.7:47768..47899,AL357412.1:2654..2824, FT AL136089.15:404..3459) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-003" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: cDNAs: Em:AL833083.2" FT mRNA join(39760142..39760241,AL590999.7:3938..4161, FT AL590999.7:8619..8708,AL590999.7:12124..12198, FT AL590999.7:12671..12765,AL590999.7:15201..15534, FT AL590999.7:16514..16624,AL590999.7:18031..18134, FT AL590999.7:19197..19263,AL590999.7:20929..21046, FT AL590999.7:23021..23159,AL590999.7:25894..25952, FT AL590999.7:26095..26279,AL590999.7:26869..27168, FT AL590999.7:31653..31760,AL590999.7:35177..35283, FT AL590999.7:36370..36454,AL590999.7:39032..39138, FT AL590999.7:39325..39413,AL590999.7:44503..44671, FT AL590999.7:44866..44973,AL590999.7:46568..46628, FT AL590999.7:47768..47899,AL357412.1:2654..2824, FT AL136089.15:404..3459) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-001" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:AL596702.1 Em:BM679162.1 FT Em:BM973369.1 Em:BM974490.1 Em:DA581726.1" FT /note="match: cDNAs: Em:AB002379.2 Em:AL833083.2" FT misc_feature complement(39733498..39733603) FT /note="Sequence from AC026555 + AC027186 sequenced by WIBR" FT misc_feature complement(39717338..39717613) FT /note="Sequence confirmed by AC026555 sequenced by WIBR" FT misc_feature complement(39716855..39717129) FT /note="Sequence confirmed by AC026555 sequenced by WIBR" FT misc_feature complement(39716374..39716391) FT /note="Sequence confirmed by AC026555 sequenced by WIBR" FT misc_feature complement(39715896..39716072) FT /note="Sequence confirmed by AC026555 sequenced by WIBR" FT mRNA complement(join(AL590387.7:54175..54254,39682468..39682542, FT 39686198..39686353,39688478..39688587,39693021..39693181)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-004" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:CD684245.1" FT mRNA join(complement(39693021..39693181), FT complement(39688478..39688587), FT complement(39682468..39682542), FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:82850..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:BG189781 Em:BG189781.1 Em:BG715118 FT Em:BG715118.1 Em:BI118088 Em:BI118088.1 Em:BM042034 FT Em:BM042034.1 Em:BM667917.1" FT /note="match: cDNAs: Em:AK043404.1 Em:AK123217.1 FT Em:AK131471.1 Em:AL832634.2 Em:BC022074" FT CDS join(complement(39693021..39693086), FT complement(39688478..39688587), FT complement(39682468..39682542), FT complement(AL590387.7:54107..54254), FT complement(AL590387.7:49346..49455), FT complement(AL590387.7:27686..27815), FT complement(AL590387.7:10551..10757), FT complement(AL590387.7:758..901),AL035464.20:620..706, FT AL035464.20:7445..7548,AL035464.20:39916..40021, FT AL035464.20:40911..41049,AL035464.20:45383..45601, FT complement(AL160161.10:43877..43985), FT complement(AL160161.10:32772..32827), FT complement(AL136087.12:138482..138532), FT complement(AL136087.12:115294..115378), FT complement(AL136087.12:113255..113390), FT complement(AL136087.12:110137..110234), FT complement(AL136087.12:99336..99386), FT complement(AL136087.12:98560..98649), FT complement(AL136087.12:96569..96675), FT complement(AL136087.12:89392..89408)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-001" FT /standard_name="OTTHUMP00000016348" FT /product="kinesin family member 6" FT /note="match: proteins: Sw:Q6ZMV9" FT /protein_id="CAJ58477.1" FT /translation="MVKQTIQIFARVKPPVRKHQQGIYSIDEDEKLIPSLEIILPRDLA FT DGFVNNKRESYKFKFQRIFDQDANQETVFENIAKPVAGSVLAGYNGTIFAYGQTGSGKT FT FTITGGAERYSDRGIIPRTLSYIFEQLQKDSSKIYTTHISYLEIYNECGYDLLDPRHEA FT SSLEDLPKVTILEDPDQNIHLKNLTLHQATTEEEALNLLFLGDTNRMIAETPMNQASTR FT SHCIFTIHLSSKEPGSATVRHAKLHLVDLAGSERVAKTGVGGHLLTEAKYINLSLHYLE FT QVIIALSEKHRSHIPYRNSMMTSVLRDSLGGNCMTTMIATLSLEKRNLDESISTCRFAQ FT RVALIKNEAVLNEEINPRLVIKRLQKEIQELKDELAMVTGEQRTEALTEAELLQLEKLI FT TSFLEDQDSDSRLEVGADMRKVHHCFHHLKKLLNDKKILENNTVSSESKDQDCQEPLKE FT EEYRKLRDILKQRDNEINILVNMLKKEKKKAQEALHLAGMDRREFRQSQSPPFRLGNPE FT EGQRMRLSSAPSQAQDFSILGKRSSLLHKKIGMREEMSLGCQEAFEIFKRDHADSVTID FT DNKQILKQRFSEAKALGESINEARSKIGHLKEEITQRHIQQVALGISENMAVPLMPDQQ FT EEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKLQKEFEVWWAEEATNLQ FT VNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSSGGWEVQDQGTGRFDVCDVNARKILP FT SPCPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCLG FT SN" FT mRNA complement(join(39657754..39659638,39682468..39682542, FT 39682661..39682735)) FT /gene="KIF6" FT /locus_tag="RP1-137F1.4-003" FT /product="kinesin family member 6" FT /note="match: ESTs: Em:BI818442.1" FT misc_feature complement(39679186..39679207) FT /note="Sequence confirmed by AC026555 and AC027186 FT sequenced by WIBR" FT polyA_signal complement(39657767..39657772) FT polyA_site complement(39657754) FT misc_feature complement(39647629..39647701) FT /note="Sequence confirmed by AC026555 + AC027186 sequenced FT by WIBR" FT misc_feature complement(39644728..39644808) FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature complement(39629355) FT /note="Clone_left_end: RP11-505E17" FT misc_feature 39822086..39868424 FT /note="annotated region of clone" FT mRNA join(39824023..39824246,39828704..39829251) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-006" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:BE961075.1 Em:BG199271.1 FT Em:BG205529.1 Em:BG700821.1 Em:BI862384.1 Em:BQ223091.1" FT mRNA join(39824023..39824246,39828704..39828793, FT 39828899..39829104,39832209..39832283,39832756..39832850, FT 39835286..39835297) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-002" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:BI603010.1" FT CDS join(39824079..39824246,39828704..39828793, FT 39832209..39832283,39832756..39832850,39835286..39835619, FT 39836599..39836709,39838116..39838219,39839282..39839348, FT 39841014..39841131,39843106..39843244,39845979..39846037, FT 39846180..39846364,39846954..39847253,39851738..39851845, FT 39855262..39855368,39856455..39856539,39859117..39859223, FT 39859410..39859498,39864588..39864756,39864951..39865058, FT 39866653..39866713,39867853..39867984, FT AL357412.1:2654..2824,AL136089.15:404..628) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-001" FT /standard_name="OTTHUMP00000016351" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: proteins: Sw:Q80U19.2 Sw:Q86T65.3 FT Tr:Q3UHB4.1" FT /protein_id="CAI16176.2" FT /translation="MAPRKRSHHGLGFLCCFGGSDIPEINLRDNHPLQFMEFSSPIPNA FT EELNIRFAELVDELDLTDKNREAMFALPPEKKWQIYCSKKKEQEDPNKLATSWPDYYID FT RINSMAAMQSLYAFDEEETEMRNQVVEDLKTALRTQPMRFVTRFIELEGLTCLLNFLRS FT MDHATCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISTIAQSLRTENSKTKVAVLEI FT LGAVCLVPGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRYRDEVNLKTAIMSFI FT NAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMVRNEDDL FT ELARRFDMVHIDTKSASQMFELIHKKLKYTEAYPCLLSVLHHCLQMPYKRNGGYFQQWQ FT LLDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLINENEVKQWRDQAEKFRKEHMEL FT VSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQELRQARGQVAELVAQLSELSTG FT PVSSPPPPGGPLTLSSSMTTNDLPPPPPPLPFACCPPPPPPPLPPGGPPTPPGAPPCLG FT MGLPLPQDPYPSSDVPLRKKRVPQPSHPLKSFNWVKLNEERVPGTVWNEIDDMQVFRIL FT DLEDFEKMFSAYQRHQKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKLKLSNEE FT IRQAILKMDEQEDLAKDMLEQLLKFIPEKSDIDLLEEHKHEIERMARADRFLYEMSRID FT HYQQRLQALFFKKKFQERLAEAKPKVEAILLASRELVRSKRLRQMLEVILAIGNFMNKG FT QRGGAYGFRVASLNKIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSELQHLPEAAK FT VNLAELEKEVGNLRRGLRAVEVELEYQRRQVREPSDKFVPVMSDFITVSSFSFSELEDQ FT LNEARDKFAKALMHFGEHDSKMQPDEFFGIFDTFLQAFSEARQDLEAMRRRKEEEERRA FT RMEAMLKEQRERERWQRQRKVLAAGSSLEEGGEFDDLVSALRSGEVFDKDLCKLKRSRK FT RSGSQALEVTRERAINRLNY" FT mRNA join(39841122..39841131,39843106..39843244, FT 39845979..39846037,39846180..39846549) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-004" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:BI965413.1" FT mRNA join(complement(AL161439.15:24863..24988), FT 39824023..39824246,39828704..39828793,39832209..39832283, FT 39832756..39832850,39835286..39835619,39836599..39836709, FT 39838116..39838219,39839282..39839348,39841014..39841131, FT 39843106..39843244,39845979..39846037,39846180..39846364, FT 39846954..39847253,39851738..39851845,39855262..39855368, FT 39856455..39856539,39859117..39859223,39859410..39859498, FT 39864588..39864756,39864951..39865058,39866653..39866713, FT 39867853..39867984,AL357412.1:2654..2824, FT AL136089.15:404..3459) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-003" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: cDNAs: Em:AL833083.2" FT mRNA join(complement(AL161439.15:25541..25640), FT 39824023..39824246,39828704..39828793,39832209..39832283, FT 39832756..39832850,39835286..39835619,39836599..39836709, FT 39838116..39838219,39839282..39839348,39841014..39841131, FT 39843106..39843244,39845979..39846037,39846180..39846364, FT 39846954..39847253,39851738..39851845,39855262..39855368, FT 39856455..39856539,39859117..39859223,39859410..39859498, FT 39864588..39864756,39864951..39865058,39866653..39866713, FT 39867853..39867984,AL357412.1:2654..2824, FT AL136089.15:404..3459) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-001" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:AL596702.1 Em:BM679162.1 FT Em:BM973369.1 Em:BM974490.1 Em:DA581726.1" FT /note="match: cDNAs: Em:AB002379.2 Em:AL833083.2" FT mRNA join(39855181..39855368,39856455..39856539, FT 39859117..39859137) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-005" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:BF929132.1" FT misc_feature 39864425 FT /note="Clone_left_end: RP1-90A20" FT mRNA complement(join(39856566..39856831,39859082..39859155, FT 39859399..39859539,39864973..39865129)) FT /locus_tag="RP11-61I13.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL079669.1 Em:BG460591.1" FT mRNA complement(join(39856650..39856831,39859082..39859155, FT 39864973..39865156)) FT /locus_tag="RP11-61I13.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI343777.1" FT mRNA complement(join(39865116..39865176,39866737..39866788, FT 39867525..39867847)) FT /locus_tag="RP11-61I13.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF772485" FT misc_feature 39868425..39869285 FT /note="annotated region of clone" FT CDS join(AL590999.7:3994..4161,AL590999.7:8619..8708, FT AL590999.7:12124..12198,AL590999.7:12671..12765, FT AL590999.7:15201..15534,AL590999.7:16514..16624, FT AL590999.7:18031..18134,AL590999.7:19197..19263, FT AL590999.7:20929..21046,AL590999.7:23021..23159, FT AL590999.7:25894..25952,AL590999.7:26095..26279, FT AL590999.7:26869..27168,AL590999.7:31653..31760, FT AL590999.7:35177..35283,AL590999.7:36370..36454, FT AL590999.7:39032..39138,AL590999.7:39325..39413, FT AL590999.7:44503..44671,AL590999.7:44866..44973, FT AL590999.7:46568..46628,AL590999.7:47768..47899, FT 39869078..39869248,AL136089.15:404..628) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-001" FT /standard_name="OTTHUMP00000016351" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: proteins: Sw:Q80U19.2 Sw:Q86T65.3 FT Tr:Q3UHB4.1" FT /protein_id="CAI23288.2" FT /translation="MAPRKRSHHGLGFLCCFGGSDIPEINLRDNHPLQFMEFSSPIPNA FT EELNIRFAELVDELDLTDKNREAMFALPPEKKWQIYCSKKKEQEDPNKLATSWPDYYID FT RINSMAAMQSLYAFDEEETEMRNQVVEDLKTALRTQPMRFVTRFIELEGLTCLLNFLRS FT MDHATCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISTIAQSLRTENSKTKVAVLEI FT LGAVCLVPGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRYRDEVNLKTAIMSFI FT NAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMVRNEDDL FT ELARRFDMVHIDTKSASQMFELIHKKLKYTEAYPCLLSVLHHCLQMPYKRNGGYFQQWQ FT LLDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLINENEVKQWRDQAEKFRKEHMEL FT VSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQELRQARGQVAELVAQLSELSTG FT PVSSPPPPGGPLTLSSSMTTNDLPPPPPPLPFACCPPPPPPPLPPGGPPTPPGAPPCLG FT MGLPLPQDPYPSSDVPLRKKRVPQPSHPLKSFNWVKLNEERVPGTVWNEIDDMQVFRIL FT DLEDFEKMFSAYQRHQKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKLKLSNEE FT IRQAILKMDEQEDLAKDMLEQLLKFIPEKSDIDLLEEHKHEIERMARADRFLYEMSRID FT HYQQRLQALFFKKKFQERLAEAKPKVEAILLASRELVRSKRLRQMLEVILAIGNFMNKG FT QRGGAYGFRVASLNKIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSELQHLPEAAK FT VNLAELEKEVGNLRRGLRAVEVELEYQRRQVREPSDKFVPVMSDFITVSSFSFSELEDQ FT LNEARDKFAKALMHFGEHDSKMQPDEFFGIFDTFLQAFSEARQDLEAMRRRKEEEERRA FT RMEAMLKEQRERERWQRQRKVLAAGSSLEEGGEFDDLVSALRSGEVFDKDLCKLKRSRK FT RSGSQALEVTRERAINRLNY" FT mRNA join(complement(AL161439.15:24863..24988), FT AL590999.7:3938..4161,AL590999.7:8619..8708, FT AL590999.7:12124..12198,AL590999.7:12671..12765, FT AL590999.7:15201..15534,AL590999.7:16514..16624, FT AL590999.7:18031..18134,AL590999.7:19197..19263, FT AL590999.7:20929..21046,AL590999.7:23021..23159, FT AL590999.7:25894..25952,AL590999.7:26095..26279, FT AL590999.7:26869..27168,AL590999.7:31653..31760, FT AL590999.7:35177..35283,AL590999.7:36370..36454, FT AL590999.7:39032..39138,AL590999.7:39325..39413, FT AL590999.7:44503..44671,AL590999.7:44866..44973, FT AL590999.7:46568..46628,AL590999.7:47768..47899, FT 39869078..39869248,AL136089.15:404..3459) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-003" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: cDNAs: Em:AL833083.2" FT mRNA join(complement(AL161439.15:25541..25640), FT AL590999.7:3938..4161,AL590999.7:8619..8708, FT AL590999.7:12124..12198,AL590999.7:12671..12765, FT AL590999.7:15201..15534,AL590999.7:16514..16624, FT AL590999.7:18031..18134,AL590999.7:19197..19263, FT AL590999.7:20929..21046,AL590999.7:23021..23159, FT AL590999.7:25894..25952,AL590999.7:26095..26279, FT AL590999.7:26869..27168,AL590999.7:31653..31760, FT AL590999.7:35177..35283,AL590999.7:36370..36454, FT AL590999.7:39032..39138,AL590999.7:39325..39413, FT AL590999.7:44503..44671,AL590999.7:44866..44973, FT AL590999.7:46568..46628,AL590999.7:47768..47899, FT 39869078..39869248,AL136089.15:404..3459) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-001" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:AL596702.1 Em:BM679162.1 FT Em:BM973369.1 Em:BM974490.1 Em:DA581726.1" FT /note="match: cDNAs: Em:AB002379.2 Em:AL833083.2" FT misc_feature 39869286..39968664 FT /note="annotated region of clone" FT polyA_signal 39872621..39872626 FT polyA_site 39872641 FT polyA_site 39872645 FT polyA_site complement(39872834) FT polyA_signal complement(39872850..39872855) FT polyA_site complement(39873096) FT polyA_signal complement(39873115..39873120) FT CDS join(AL590999.7:3994..4161,AL590999.7:8619..8708, FT AL590999.7:12124..12198,AL590999.7:12671..12765, FT AL590999.7:15201..15534,AL590999.7:16514..16624, FT AL590999.7:18031..18134,AL590999.7:19197..19263, FT AL590999.7:20929..21046,AL590999.7:23021..23159, FT AL590999.7:25894..25952,AL590999.7:26095..26279, FT AL590999.7:26869..27168,AL590999.7:31653..31760, FT AL590999.7:35177..35283,AL590999.7:36370..36454, FT AL590999.7:39032..39138,AL590999.7:39325..39413, FT AL590999.7:44503..44671,AL590999.7:44866..44973, FT AL590999.7:46568..46628,AL590999.7:47768..47899, FT AL357412.1:2654..2824,39869589..39869813) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-001" FT /standard_name="OTTHUMP00000016351" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: proteins: Sw:Q80U19.2 Sw:Q86T65.3 FT Tr:Q3UHB4.1" FT /protein_id="CAI20010.2" FT /translation="MAPRKRSHHGLGFLCCFGGSDIPEINLRDNHPLQFMEFSSPIPNA FT EELNIRFAELVDELDLTDKNREAMFALPPEKKWQIYCSKKKEQEDPNKLATSWPDYYID FT RINSMAAMQSLYAFDEEETEMRNQVVEDLKTALRTQPMRFVTRFIELEGLTCLLNFLRS FT MDHATCESRIHTSLIGCIKALMNNSQGRAHVLAQPEAISTIAQSLRTENSKTKVAVLEI FT LGAVCLVPGGHKKVLQAMLHYQVYAAERTRFQTLLNELDRSLGRYRDEVNLKTAIMSFI FT NAVLNAGAGEDNLEFRLHLRYEFLMLGIQPVIDKLRQHENAILDKHLDFFEMVRNEDDL FT ELARRFDMVHIDTKSASQMFELIHKKLKYTEAYPCLLSVLHHCLQMPYKRNGGYFQQWQ FT LLDRILQQIVLQDERGVDPDLAPLENFNVKNIVNMLINENEVKQWRDQAEKFRKEHMEL FT VSRLERKERECETKTLEKEEMMRTLNKMKDKLARESQELRQARGQVAELVAQLSELSTG FT PVSSPPPPGGPLTLSSSMTTNDLPPPPPPLPFACCPPPPPPPLPPGGPPTPPGAPPCLG FT MGLPLPQDPYPSSDVPLRKKRVPQPSHPLKSFNWVKLNEERVPGTVWNEIDDMQVFRIL FT DLEDFEKMFSAYQRHQKELGSTEDIYLASRKVKELSVIDGRRAQNCIILLSKLKLSNEE FT IRQAILKMDEQEDLAKDMLEQLLKFIPEKSDIDLLEEHKHEIERMARADRFLYEMSRID FT HYQQRLQALFFKKKFQERLAEAKPKVEAILLASRELVRSKRLRQMLEVILAIGNFMNKG FT QRGGAYGFRVASLNKIADTKSSIDRNISLLHYLIMILEKHFPDILNMPSELQHLPEAAK FT VNLAELEKEVGNLRRGLRAVEVELEYQRRQVREPSDKFVPVMSDFITVSSFSFSELEDQ FT LNEARDKFAKALMHFGEHDSKMQPDEFFGIFDTFLQAFSEARQDLEAMRRRKEEEERRA FT RMEAMLKEQRERERWQRQRKVLAAGSSLEEGGEFDDLVSALRSGEVFDKDLCKLKRSRK FT RSGSQALEVTRERAINRLNY" FT polyA_site complement(39873293) FT polyA_signal complement(39873319..39873324) FT misc_feature 39876832..39876899 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(39872835..39874893,39876831..39876878, FT 39877579..39877699,39880008..>39880118)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-005" FT /product="molybdenum cofactor synthesis 1" FT /note="match: ESTs: Em:AA116535 Em:AI449494 Em:AI510460 FT Em:BF237315" FT CDS complement(join(39874133..39874893,39876831..39876878, FT 39877579..39877699,39880008..>39880118)) FT /codon_start=1 FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-005" FT /standard_name="OTTHUMP00000016357" FT /product="molybdenum cofactor synthesis 1" FT /note="match: proteins: Sw:Q9NZB8 Tr:Q9JL31" FT /protein_id="CAI20007.1" FT /translation="AFKIPGFQGQISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSE FT VSLRDHLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKNRPMILIELFLMFPNSPP FT ANPSIFSWDPLHVQGLRPRMSFSSQVATLWKGCRVPQTPPLAQQRLGSGSFQRHYTSRA FT DSDANSKCLSPGSWASAAPSGPQLTSEQLTHVDSEGRAAMVDVGRKPDTERVAVASAVV FT LLGPVAFKLVQQNQLKKGDALVVAQLAGVQAAKVTSQLIPLCHHVALSHIQVQLELDST FT RHAVKIQASCRARGPTGVEMEALTSAAVAALTLYDMCKAVSRDIVLEEIKLISKTGGQR FT GDFHRA" FT mRNA complement(join(39872835..39873540,39880069..39880118, FT 39880636..>39880748)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-006" FT /product="molybdenum cofactor synthesis 1" FT /note="match: ESTs: Em:AW296185" FT CDS complement(join(39873261..39873540,39880069..39880118, FT 39880636..>39880748)) FT /codon_start=3 FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-006" FT /standard_name="OTTHUMP00000016358" FT /product="molybdenum cofactor synthesis 1" FT /protein_id="CAI20008.1" FT /translation="NKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQ FT GQISFITSILTVARSCWPLFLWPPSSETGCAHMGHSPKDSCQTTQPTPGPVHGCSTHPS FT LFWSISGKEKLMIDCLHPHSAQIKLRCQLCRCKNEDTVWVGH" FT mRNA complement(join(39872835..39873594,39877624..39877699, FT 39880008..39880118,39880636..>39880748)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-007" FT /product="molybdenum cofactor synthesis 1" FT /note="match: ESTs: Em:AI659385 Em:AI685711 Em:BF437604" FT CDS complement(join(39873536..39873594,39877624..39877699, FT 39880008..39880118,39880636..>39880748)) FT /codon_start=3 FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-007" FT /standard_name="OTTHUMP00000016359" FT /product="molybdenum cofactor synthesis 1" FT /protein_id="CAI20009.1" FT /translation="NKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQ FT GQISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLTSSLL FT LPKSVSHQTCSLSA" FT CDS complement(join(39874133..39874893,39877579..39877699, FT 39880008..39880118,39880636..39880748,39881061..39881172, FT 39881518..39881579,39883812..39883976,39893422..39893578)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-002" FT /standard_name="OTTHUMP00000016354" FT /product="molybdenum cofactor synthesis 1" FT /note="match: proteins: Sw:Q9NZB8 Tr:Q9JL31" FT /protein_id="CAI20011.1" FT /translation="MPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIR FT PDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIV FT RRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMP FT FDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSE FT HFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLRAGASEQELLRIIGAAVGRKKRQHAE FT LFLMFPNSPPANPSIFSWDPLHVQGLRPRMSFSSQVATLWKGCRVPQTPPLAQQRLGSG FT SFQRHYTSRADSDANSKCLSPGSWASAAPSGPQLTSEQLTHVDSEGRAAMVDVGRKPDT FT ERVAVASAVVLLGPVAFKLVQQNQLKKGDALVVAQLAGVQAAKVTSQLIPLCHHVALSH FT IQVQLELDSTRHAVKIQASCRARGPTGVEMEALTSAAVAALTLYDMCKAVSRDIVLEEI FT KLISKTGGQRGDFHRA" FT CDS complement(join(<39880008..39880118,39880636..39880748, FT 39881061..39881172,39881518..39881579,39883812..39883976, FT 39893422..39893578)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-004" FT /standard_name="OTTHUMP00000016356" FT /product="molybdenum cofactor synthesis 1" FT /protein_id="CAI20012.1" FT /translation="MPEEGVPLTPKANLLTTEEILTLARLFVKEGIDKIRLTGGEPLIR FT PDVVDIVAQLQRLEGLRTIGVTTNGINLARLLPQLQKAGLSAINISLDTLVPAKFEFIV FT RRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDELLDFAALTEGLPLDVRFIEYMP FT FDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEEESSTAKAFKIPGFQGQISFITSMSE FT HFCGTCNRLRITADGNLK" FT mRNA join(complement(AL161439.15:24863..24988), FT AL590999.7:3938..4161,AL590999.7:8619..8708, FT AL590999.7:12124..12198,AL590999.7:12671..12765, FT AL590999.7:15201..15534,AL590999.7:16514..16624, FT AL590999.7:18031..18134,AL590999.7:19197..19263, FT AL590999.7:20929..21046,AL590999.7:23021..23159, FT AL590999.7:25894..25952,AL590999.7:26095..26279, FT AL590999.7:26869..27168,AL590999.7:31653..31760, FT AL590999.7:35177..35283,AL590999.7:36370..36454, FT AL590999.7:39032..39138,AL590999.7:39325..39413, FT AL590999.7:44503..44671,AL590999.7:44866..44973, FT AL590999.7:46568..46628,AL590999.7:47768..47899, FT AL357412.1:2654..2824,39869589..39872644) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-003" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: cDNAs: Em:AL833083.2" FT misc_feature 39894396 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 800bp from restriction digest data and FT spanning pUC clone" FT misc_feature 39894443 FT /note="Weak data" FT mRNA join(complement(AL161439.15:25541..25640), FT AL590999.7:3938..4161,AL590999.7:8619..8708, FT AL590999.7:12124..12198,AL590999.7:12671..12765, FT AL590999.7:15201..15534,AL590999.7:16514..16624, FT AL590999.7:18031..18134,AL590999.7:19197..19263, FT AL590999.7:20929..21046,AL590999.7:23021..23159, FT AL590999.7:25894..25952,AL590999.7:26095..26279, FT AL590999.7:26869..27168,AL590999.7:31653..31760, FT AL590999.7:35177..35283,AL590999.7:36370..36454, FT AL590999.7:39032..39138,AL590999.7:39325..39413, FT AL590999.7:44503..44671,AL590999.7:44866..44973, FT AL590999.7:46568..46628,AL590999.7:47768..47899, FT AL357412.1:2654..2824,39869589..39872644) FT /gene="DAAM2" FT /locus_tag="RP1-278E11.1-001" FT /product="dishevelled associated activator of morphogenesis FT 2" FT /note="match: ESTs: Em:AL596702.1 Em:BM679162.1 FT Em:BM973369.1 Em:BM974490.1 Em:DA581726.1" FT /note="match: cDNAs: Em:AB002379.2 Em:AL833083.2" FT mRNA complement(join(39872835..39874605,39876827..39876878, FT 39877579..39877699,39880008..39880118,39880636..39880748, FT 39881061..39881172,39881524..39881579,39883812..39883976, FT 39893422..39893584,39895063..>39895139)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-003" FT /product="molybdenum cofactor synthesis 1" FT CDS complement(join(39874227..39874605,39876827..39876878, FT 39877579..39877699,39880008..39880118,39880636..39880748, FT 39881061..39881172,39881524..39881579,39883812..39883976, FT 39893422..39893584,39895063..>39895139)) FT /codon_start=3 FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-003" FT /standard_name="OTTHUMP00000016355" FT /product="molybdenum cofactor synthesis 1" FT /note="match: proteins: Sw:P0A5K6 Sw:P45310 Sw:P94328 FT Sw:Q39056 Sw:Q48260 Sw:Q9KT79 Sw:Q9ZFA6 Tr:Q9NIG3 FT Tr:Q9VTE4" FT /protein_id="CAI20013.1" FT /translation="LTDSFGRQHSYLRISLTEKCNLRCEYCMPEEGVPLTPKANLLTTE FT EILTLARLFVKEGIDKIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARLL FT PQLQKAGLSAINISLDTLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVNCVVMRGLN FT EDELLDFAALTEGLPLDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKVPEE FT ESSTAKAFKIPGFQGQISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRDHLR FT AGASEQELLRIIGAAVGRKKRQHAGMFSISQMKNRPMILIGGTTNSCGLGRTGSYGRCG FT QEARHRAGGCGFSRGPPGTGSLQACPAEPAQERRCPSGGPAGWSPGSQGDQPADPSVPP FT RGPEPHPGAAGAGQHTPCREDPGILPGSGPHRGGDGGPDLCCSGRPHPV" FT mRNA complement(join(39872835..39874893,39876816..39876878, FT 39877579..39877699,39880008..39880118,39880636..39880748, FT 39881061..39881172,39881518..39881579,39883812..39883976, FT 39893422..39893589,39895068..39895455)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-001" FT /product="molybdenum cofactor synthesis 1" FT /note="match: ESTs: Em:AA287154 Em:AA702162 Em:AA782094 FT Em:AI122656 Em:AI809330 Em:AL134824 Em:AL570709 Em:AL583528 FT Em:AW057590 Em:AW172587 Em:BE208679 Em:BE302653 Em:BE392276 FT Em:BE466717 Em:BE907614 Em:BF236724 Em:BF237315 Em:BG747957 FT Em:BG818059 Em:BI854422 Em:BM258318 Em:C03031" FT /note="match: cDNAs: Em:AF214015.1 Em:AF214016.1 FT Em:AF214017.1 Em:AF214018.1 Em:AF214019.1 Em:AJ224328.1" FT CDS complement(join(39876823..39876878,39877579..39877699, FT 39880008..39880118,39880636..39880748,39881061..39881172, FT 39881518..39881579,39883812..39883976,39893422..39893589, FT 39895068..39895317)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-001" FT /standard_name="OTTHUMP00000016353" FT /product="molybdenum cofactor synthesis 1" FT /note="match: proteins: Sw:O14940 Sw:Q39055 Tr:Q9IAA7 FT Tr:Q9JL33 Tr:Q9N1B4 Tr:Q9N1B6 Tr:Q9NIG4" FT /protein_id="CAI20014.1" FT /translation="MWKSWKLRTDVRVREGAGGSPCASSQPGSRGPCFLPGLSSQEVSR FT RRQFLREHAAPFSAFLTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTT FT EEILTLARLFVKEGIDKIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARL FT LPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMR FT GLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKV FT PEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRD FT HLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKNRPMILIGG" FT mRNA complement(join(<39880008..39880118,39880636..39880748, FT 39881061..39881172,39881518..39881579,39883812..39883976, FT 39893422..39893589,39895068..39895194,39900042..39900171)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-004" FT /product="molybdenum cofactor synthesis 1" FT /note="match: ESTs: Em:BI762039" FT mRNA complement(join(39872835..39874893,39877579..39877699, FT 39880008..39880118,39880636..39880748,39881061..39881172, FT 39881518..39881579,39883812..39883976,39893422..39893589, FT 39902034..39902236)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-002" FT /product="molybdenum cofactor synthesis 1" FT /note="match: ESTs: Em:AA702162 Em:AA782094 Em:AI139490 FT Em:AI219990 Em:AI307324 Em:AI659385 Em:AI685711 Em:AI809330 FT Em:AI953095 Em:AL570709 Em:AU148640 Em:AU158894 Em:AW057590 FT Em:AW172587 Em:BE208679 Em:BE466717 Em:BE898308 Em:BE898369 FT Em:BF437604 Em:BG001481 Em:R28654" FT /note="match: cDNAs: Em:AF214023.1 Em:AK056740.1" FT mRNA complement(join(39872835..39874893,39876816..39876878, FT 39877579..39877699,39880008..39880118,39880636..39880748, FT 39881061..39881172,39881518..39881579,39883812..39883976, FT 39893422..39893589,39895068..39895194,39902034..39902251)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-008" FT /product="molybdenum cofactor synthesis 1" FT /note="match: ESTs: Em:AA287154 Em:AA702162 Em:AA782094 FT Em:AI122656 Em:AI809330 Em:AL134824 Em:AL523488 Em:AL530552 FT Em:AL544502 Em:AL570709 Em:AL583528 Em:AL597776 Em:AL602617 FT Em:AU100329 Em:AU124858 Em:AU141295 Em:AU141382 Em:AW057590 FT Em:AW172587 Em:BE208679 Em:BE302653 Em:BE392276 Em:BE466717 FT Em:BE810077 Em:BF236724 Em:BF533814 Em:BF783533 Em:BG818059 FT Em:BI341959 Em:BI665674 Em:BI854422 Em:BM258318 Em:C03031" FT /note="match: cDNAs: Em:AF034374.1 Em:AF214015.1 FT Em:AF214016.1 Em:AF214017.1 Em:AF214018.1 Em:AF214019.1" FT CDS complement(join(39876823..39876878,39877579..39877699, FT 39880008..39880118,39880636..39880748,39881061..39881172, FT 39881518..39881579,39883812..39883976,39893422..39893589, FT 39895068..39895194,39902034..39902156)) FT /gene="MOCS1" FT /locus_tag="RP1-278E11.2-008" FT /standard_name="OTTHUMP00000016360" FT /product="molybdenum cofactor synthesis 1" FT /note="match: proteins: Sw:Q39055 Tr:Q9IAA7 Tr:Q9JL33 FT Tr:Q9N1B2 Tr:Q9N1B4 Tr:Q9NIG4" FT /protein_id="CAI20015.1" FT /translation="MAARPLSRMLRRLLRSSARSCSSGAPVTQPCPGESARAASEEVSR FT RRQFLREHAAPFSAFLTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTT FT EEILTLARLFVKEGIDKIRLTGGEPLIRPDVVDIVAQLQRLEGLRTIGVTTNGINLARL FT LPQLQKAGLSAINISLDTLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMR FT GLNEDELLDFAALTEGLPLDVRFIEYMPFDGNKWNFKKMVSYKEMLDTVRQQWPELEKV FT PEEESSTAKAFKIPGFQGQISFITSMSEHFCGTCNRLRITADGNLKVCLFGNSEVSLRD FT HLRAGASEQELLRIIGAAVGRKKRQHAGMFSISQMKNRPMILIGG" FT CDS complement(39926153..39926572) FT /pseudo FT /locus_tag="RP1-278E11.3-001" FT /product="pseudogene similar to part of ribosomal protein FT L23 RPL23" FT /note="match: proteins: Sw:O42867 Sw:P04451 Sw:P48158 FT Sw:P48159 Sw:P62832 Sw:Q07760 Sw:Q93140 Sw:Q9XEK8 Tr:O65068 FT Tr:Q9SMI7 Tr:Q9YHX0" FT CDS join(39960554..39960910,39967231..39967972) FT /pseudo FT /locus_tag="RP1-278E11.5-001" FT /product="pseudogene similar to tubulin beta polypeptide FT TUBB" FT misc_feature 39968465 FT /note="Clone_left_end: RP1-247G22" FT misc_feature 40088951 FT /note="Clone_right_end: RP1-247G22" FT misc_feature 40112515 FT /note="Clone_right_end: RP1-90A20" FT misc_feature 40134768..40134866 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 40146368..40339493 FT /note="annotated region of clone" FT misc_feature 40146368 FT /note="Clone_left_end: RP11-552E20" FT misc_feature 40181941 FT /note="Clone_right_end: RP11-200E19" FT polyA_site complement(40239306) FT polyA_signal complement(40239320..40239325) FT mRNA complement(join(40239305..40239699,40243745..40243865, FT 40243954..40243976)) FT /locus_tag="RP11-552E20.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI522170 Em:AI948801 Em:AW237335 FT Em:AW772365" FT mRNA join(40302693..40302862,40304856..40304998, FT AL591063.6:9528..10131) FT /locus_tag="RP11-535K1.1-003" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA428133 Em:AA429658 Em:AA449105 FT Em:AA449540 Em:AA719350 Em:AA725620 Em:AI015294 Em:AI017322 FT Em:AI073419 Em:AI082860 Em:AI637936 Em:AL045590 Em:BE552251 FT Em:BF057763" FT misc_feature 40307967 FT /note="Clone_left_end: RP11-535K1" FT mRNA join(40308204..40308340,AL591063.6:9528..10131) FT /locus_tag="RP11-535K1.1-004" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM683644.1 Em:BM799555.1 FT Em:BM929706.1 Em:H87235 Em:H87235.1" FT polyA_site complement(40312083) FT polyA_signal complement(40312098..40312103) FT mRNA complement(join(40312083..40312495,40313750..40313890)) FT /locus_tag="RP11-552E20.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG195396 Em:BG216109 Em:R41561 FT Em:T08006" FT misc_feature 40318241..40318459 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT mRNA complement(join(40326483..40327220,40337128..40337213)) FT /locus_tag="RP11-552E20.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM479502" FT misc_feature 40339493 FT /note="Clone_right_end: RP11-552E20" FT misc_feature 40339494..40437919 FT /note="annotated region of clone" FT mRNA join(40346076..40346311,40346462..40346636, FT 40347021..40347624) FT /locus_tag="RP11-535K1.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA429658 Em:AA446148 Em:AA460212 FT Em:AA719350 Em:AA725620 Em:AA884447 Em:AI017322 Em:AI073419 FT Em:AI082860 Em:AI637936 Em:AL045590 Em:BF057763 Em:H87236" FT mRNA join(40346076..40346636,40347021..40347624) FT /locus_tag="RP11-535K1.1-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA293846 Em:AA429658 Em:AA449105 FT Em:AA628788 Em:AA719350 Em:AA884447 Em:AI073419 Em:AI082860 FT Em:AI632068 Em:AI637936 Em:AL045589 Em:AL045590 Em:AW295465 FT Em:BE552251 Em:BG183126 Em:BG701637 Em:BI459675 Em:BI561942 FT Em:H87236" FT polyA_signal 40347605..40347610 FT polyA_site 40347626 FT CDS complement(join(40359682..40360651,40399453..40400852)) FT /gene="RP11-535K1.2" FT /locus_tag="RP11-535K1.2-001" FT /standard_name="OTTHUMP00000016361" FT /product="novel protein" FT /note="match: proteins: Sw:Q9ULH4" FT /protein_id="CAI15264.1" FT /translation="METLLGGLLAFGMAFAVVDACPKYCVCQNLSESLGTLCPSKGLLF FT VPPDIDRRTVELRLGGNFIIHISRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRS FT LHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSYNNLHG FT LPWDSVRRMVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQ FT ASALTATPFAPPLSFSFGGNPLHCNCELLWLRRLERDDDLETCGSPGGLKGRYFWHVRE FT EEFVCEPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWVAPDDRLVGNSSRTAVYD FT NGTLDIFITTSQDSGAFTCIAANAAGEATAMVEVSIVQLPHLSNSTSRTAPPKSRLSDI FT TGSSKTSRGGGGSGGGEPPKSPPERAVLVSEVTTTSALVKWSVSKSAPRVKMYQLQYNC FT SDDEVLIYRMIPASNKAFVVNNLVSGTGYDLCVLAMWDDTATTLTATNIVGCAQFFTKA FT DYPQCQSMHSQILGGTMILVIGGIIVATLLVFIVILMVRYKVCNHEAPSKMAAAVSNVY FT SQTNGAQPPPPSSAPAGAPPQGPPKVVVRNELLDFTASLARASDSSSSSSLGSGEAAGL FT GRAPWRIPPSAPRPKPSLDRLMGAFASLDLKSQRKEELLDSRTPAGRGAGTSARGHHSD FT REPLLGPPAARARSLLPLPLEGKAKRSHSFDMGDFAAAAAGGVVPGGYSPPRKVSNIWT FT KRSLSVNGMLLPFEESDLVGARGTFGSSEWVMESTV" FT mRNA complement(join(40359325..40360651,40399453..40400870, FT AL033380.11:74234..74758)) FT /gene="RP11-535K1.2" FT /locus_tag="RP11-535K1.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AW161566 Em:AW163387 Em:AW415047 FT Em:BF312768 Em:BM193100 Em:R15139 Em:T08007" FT /note="match: cDNAs: Em:AB033072.1 Em:AB056799.1 FT Em:AK017594.1 Em:BC007718.1" FT misc_feature 40433920 FT /note="Clone_left_end: RP11-121P10" FT mRNA join(AL139275.30:156326..156495,AL139275.30:158489..158631, FT 40347021..40347624) FT /locus_tag="RP11-535K1.1-003" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA428133 Em:AA429658 Em:AA449105 FT Em:AA449540 Em:AA719350 Em:AA725620 Em:AI015294 Em:AI017322 FT Em:AI073419 Em:AI082860 Em:AI637936 Em:AL045590 Em:BE552251 FT Em:BF057763" FT mRNA join(AL139275.30:161837..161973,40347021..40347624) FT /locus_tag="RP11-535K1.1-004" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM683644.1 Em:BM799555.1 FT Em:BM929706.1 Em:H87235 Em:H87235.1" FT misc_feature 40437920..40480546 FT /note="annotated region of clone" FT mRNA complement(join(40469370..40469504,40469976..40470132)) FT /locus_tag="RP11-121P10.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI198684" FT misc_feature 40478447 FT /note="Clone_left_end: RP3-462C17" FT misc_feature 40480547..40596552 FT /note="annotated region of clone" FT polyA_site complement(40484083) FT polyA_signal complement(40484100..40484105) FT mRNA complement(join(40484075..40484183,40485043..40485252, FT 40491571..40491672)) FT /locus_tag="RP3-462C17.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA393982 Em:AA397907 Em:AA405723 FT Em:AA405909 Em:AA861900 Em:AA992067 Em:AI026919" FT mRNA complement(join(AL591063.6:21832..23158, FT AL591063.6:61960..63377,40554680..40555204)) FT /gene="RP11-535K1.2" FT /locus_tag="RP11-535K1.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AW161566 Em:AW163387 Em:AW415047 FT Em:BF312768 Em:BM193100 Em:R15139 Em:T08007" FT /note="match: cDNAs: Em:AB033072.1 Em:AB056799.1 FT Em:AK017594.1 Em:BC007718.1" FT misc_feature 40596553..40732505 FT /note="annotated region of clone" FT misc_feature 40598552 FT /note="Clone_right_end: RP3-462C17" FT misc_feature 40622740..40622779 FT /note="Sequence from clone PCR only" FT misc_feature 40622780..40622966 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT misc_feature 40622967..40623007 FT /note="Sequence from clone PCR only" FT misc_feature 40636638 FT /note="Clone_left_end: RP11-249P15" FT mRNA complement(join(40681150..40681202,40682035..40682137, FT 40682646..40683102)) FT /locus_tag="RP11-570K4.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL705284" FT misc_feature 40732505 FT /note="Clone_right_end: RP11-570K4" FT misc_feature 40752235 FT /note="Clone_left_end: RP11-162O6" FT misc_feature 40872359 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 150bp from restriction digest data and FT spanning pUC clones" FT misc_feature 40922032 FT /note="Clone_left_end: RP1-34B21" FT misc_feature 40922232..41076525 FT /note="annotated region of clone" FT mRNA complement(join(40996112..40996334,40998127..40998240, FT 40998394..40998494,40999775..40999876,41000623..41000726)) FT /locus_tag="RP1-34B21.5-002" FT /product="novel protein" FT /note="match: ESTs: Em:BG242454" FT mRNA complement(join(40996110..40996334,40998127..40998240, FT 40998394..40998494,40999420..40999487,40999775..40999876, FT 41000623..41000885,41001620..41001920,41002429..41002874)) FT /locus_tag="RP1-34B21.5-001" FT /product="novel protein" FT /note="match: ESTs: Em:BI762014 Em:BM312066" FT CDS complement(join(40996112..40996334,40998127..40998240, FT 40998394..40998494,40999420..40999487,40999775..40999876, FT 41000623..41000885,41001620..41001920,41002429..41002813)) FT /locus_tag="RP1-34B21.5-001" FT /standard_name="OTTHUMP00000016362" FT /product="novel protein" FT /protein_id="CAI20283.1" FT /translation="MCPQESSFQPSQFLLLVGVPVASVLLLAQCLRWHCPRRLLGACWT FT LNGQEEPVSQPTPQLENEVSRQHLPATLPEMVAFYQELHTPTQGQTMVRQLMHKLLVFS FT AREVDHRGGCLMLQDTGISLLIPPGAVAVGRQERVSLILVWDLSDAPSLSQAQGLVSPV FT VACGPHGASFLKPCTLTFKHCAEQPSHARTYSSNTTLLDAKVWRPLGRPGAHASRDECR FT IHLSHFSLYTCVLEAPVGREARKWLQLAVFCSPLVPGQSHLQLRIYFLNNTPCALQWAL FT TNEQPHGGRLRGPCQLFDFNGARGDQCLKLTYISEGWENVDDSSCQLVPHLHIWHGKCP FT FRSFCFRRKAADENEDCSALTNEIIVTMHTFQDGLETKYMEILRFQASEEESWAAPPPV FT SQPPPCNRLPPELFEQLRMLLEPNSITGNDWRRLASHLGLCGMKIRFLSCQRSPAAAIL FT ELFEEQNGSLQELHYLMTVMERLDCASAIQNYLSGTHGGSPGPERGGARDNQGLELDEK FT L" FT mRNA join(41010293..41010517,41010705..41010897, FT 41011296..41011437,41011679..41012076) FT /locus_tag="RP1-34B21.3-001" FT /product="novel BZRP-like protein" FT /note="match: ESTs: Em:AI052224 Em:R98203" FT /note="match: cDNAs: Em:L21950.1" FT CDS join(41010725..41010897,41011296..41011437, FT 41011679..41011876) FT /locus_tag="RP1-34B21.3-001" FT /standard_name="OTTHUMP00000016363" FT /product="novel BZRP-like protein" FT /protein_id="CAB44739.1" FT /translation="MRLQGAIFVLLPHLGPILVWLFTRDHMSGWCEGPRMLSWCPFYKV FT LLLVQTAIYSVVGYASYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFFTVHNPG FT LALLHLLLLYGLVVSTALIWHPINKLAALLLLPYLAWLTVTSALTYHLWRDSLCPVHQP FT QPTEKSD" FT polyA_signal 41012051..41012056 FT polyA_site 41012076 FT mRNA join(41021043..41021217,41029067..41029631, FT 41031840..41032250) FT /gene="APOBEC2" FT /locus_tag="RP1-34B21.2-001" FT /product="apolipoprotein B mRNA editing enzyme, catalytic FT polypeptide-like 2" FT /note="match: ESTs: Em:AA476075 Em:AA496237 Em:AA537886 FT Em:AA708834 Em:AA755921 Em:AI141858 Em:AI204314 Em:AI391036 FT Em:AL364157 Em:AV598849 Em:AW426208 Em:BE236518 Em:BE751651 FT Em:BE755962 Em:BF429823 Em:BI438931 Em:W37030 Em:W54392" FT /note="match: cDNAs: Em:AF161698.1 Em:AF161699.1" FT CDS join(41021087..41021217,41029067..41029610) FT /gene="APOBEC2" FT /locus_tag="RP1-34B21.2-001" FT /standard_name="OTTHUMP00000016367" FT /product="apolipoprotein B mRNA editing enzyme, catalytic FT polypeptide-like 2" FT /note="match: proteins: Sw:Q9WV35 Sw:Q9Y235" FT /protein_id="CAB44740.1" FT /translation="MAQKEEAAVATEAASQNGEDLENLDDPEKLKELIELPPFEIVTGE FT RLPANFFKFQFRNVEYSSGRNKTFLCYVVEAQGKGGQVQASRGYLEDEHAAAHAEEAFF FT NTILPAFDPALRYNVTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLFMWEEPEIQ FT AALKKLKEAGCKLRIMKPQDFEYVWQNFVEQEEGESKAFQPWEDIQENFLYYEEKLADI FT LK" FT polyA_site complement(41034531) FT polyA_signal complement(41034545..41034550) FT CDS complement(join(41035074..41035175,41036579..41036692, FT 41037815..41037873,41038871..41039015,41039335..41039373)) FT /locus_tag="RP1-34B21.4-001" FT /standard_name="OTTHUMP00000016364" FT /product="novel protein" FT /note="match: proteins: Sw:Q8R5F3 Sw:Q9Y530 Tr:Q961L8 FT Tr:Q9VP69" FT /protein_id="CAI20285.1" FT /translation="MASSLNEDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIA FT VLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKRASHKPTYENLQKSLEAMK FT SHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL" FT mRNA complement(join(41034531..41035175,41036579..41036692, FT 41037815..41037873,41038871..41039015,41039335..41039414, FT 41040058..41040316)) FT /locus_tag="RP1-34B21.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:BF032973 Em:BF184039 Em:BG478840 FT Em:BG743584 Em:BI105880 Em:BI225421" FT /note="match: cDNAs: Em:AJ420538.1 Em:BC011709.1" FT mRNA join(41040684..41040823,41046768..41046903, FT 41048550..41048636,41051785..41051931,41057318..41057449, FT 41057943..41058048,41059267..41059433,41060651..41060824, FT 41062135..41062236,41065096..41067715) FT /gene="NFYA" FT /locus_tag="RP1-34B21.1-001" FT /product="nuclear transcription factor Y, alpha" FT /note="match: ESTs: Em:AA281542 Em:AA382555 Em:AA382556 FT Em:AA405063 Em:AA412691 Em:AA425472 Em:AA436024 Em:AA436132 FT Em:AA470809 Em:AA485279 Em:AA485283 Em:AA736741 Em:AA889823 FT Em:AA907787 Em:AA927051 Em:AI016793 Em:AI017982 Em:AI129239 FT Em:AI141758 Em:AI146124 Em:AI160445 Em:AI167566 Em:AI208445 FT Em:AI268215 Em:AI286170 Em:AI375230 Em:AI400314 Em:AI457890 FT Em:AI469807 Em:AI478773 Em:AI494259 Em:AI621264 Em:AI631202 FT Em:C00240 Em:N49278 Em:N66509 Em:N69088 Em:N90322 Em:T29403 FT Em:W71894 Em:Z28711" FT /note="match: cDNAs: Em:D78642 Em:M34238 Em:M59079 FT Em:M86215 Em:X59711" FT mRNA join(41040722..41040823,41046768..41046903, FT 41051785..41051931,41057318..41057449,41057943..41058048, FT 41059267..41059433,41060651..41060824,41062135..41062236, FT 41065096..41065689) FT /gene="NFYA" FT /locus_tag="RP1-34B21.1-002" FT /product="nuclear transcription factor Y, alpha" FT /note="match: ESTs: Em:AA280245 Em:AA905268 Em:AI684869 FT Em:AW519403 Em:AW949743 Em:BF467759 Em:BI462067 FT Em:BM468488" FT /note="match: cDNAs: Em:AF041203.1 Em:M86214.1" FT CDS join(41046829..41046903,41048550..41048636, FT 41051785..41051931,41057318..41057449,41057943..41058048, FT 41059267..41059433,41060651..41060824,41062135..41062236, FT 41065096..41065149) FT /gene="NFYA" FT /locus_tag="RP1-34B21.1-001" FT /standard_name="OTTHUMP00000016365" FT /product="nuclear transcription factor Y, alpha" FT /note="match: proteins: Sw:P18576 Sw:P23511 Sw:P23708 FT Tr:O73743 Tr:Q26652" FT /protein_id="CAB44743.1" FT /translation="MEQYTANSNSSTEQIVVQAGQIQQQQQGGVTAVQLQTEAQVASAS FT GQQVQTLQVVQGQPLMVQVSGGQLITSTGQPIMVQAVPGGQGQTIMQVPVSGTQGLQQI FT QLVPPGQIQIQGGQAVQVQGQQGQTQQIIIQQPQTAVTAGQTQTQQQIAVQGQQVAQTA FT EGQTIVYQPVNADGTILQQVTVPVSGMITIPAASLAGAQIVQTGANTNTTSSGQGTVTV FT TLPVAGNVVNSGGMVMMVPGAGSVPAIQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQA FT RAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDSPHMQDPNQADEEAM FT TQIIRVS" FT CDS join(41046829..41046903,41051785..41051931, FT 41057318..41057449,41057943..41058048,41059267..41059433, FT 41060651..41060824,41062135..41062236,41065096..41065149) FT /gene="NFYA" FT /locus_tag="RP1-34B21.1-002" FT /standard_name="OTTHUMP00000016366" FT /product="nuclear transcription factor Y, alpha" FT /note="match: proteins: Tr:O73743" FT /protein_id="CAI20286.1" FT /translation="MEQYTANSNSSTEQIVVQAGQIQQQVQGQPLMVQVSGGQLITSTG FT QPIMVQAVPGGQGQTIMQVPVSGTQGLQQIQLVPPGQIQIQGGQAVQVQGQQGQTQQII FT IQQPQTAVTAGQTQTQQQIAVQGQQVAQTAEGQTIVYQPVNADGTILQQVTVPVSGMIT FT IPAASLAGAQIVQTGANTNTTSSGQGTVTVTLPVAGNVVNSGGMVMMVPGAGSVPAIQR FT IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR FT KRGEGGRFFSPKEKDSPHMQDPNQADEEAMTQIIRVS" FT polyA_signal 41067690..41067695 FT polyA_site 41067715 FT CDS join(41068761..41068917,41069749..41069853, FT 41072849..41072887,41073631..41073774,41076044..41076133) FT /pseudo FT /locus_tag="RP1-34B21.6-001" FT /product="soluble adenylyl cyclase (SAC) pseudogene" FT /note="match: proteins: Tr:Q96PN6 Tr:Q9NNX0 Tr:Q9Z286" FT misc_feature complement(41076526..41167934) FT /note="annotated region of clone" FT CDS complement(join(41160165..41160244,41160539..41160639, FT 41162163..41162571,41165847..41166167, FT AL391903.15:2758..2989)) FT /gene="TREML2" FT /locus_tag="RP1-238O23.6-001" FT /standard_name="OTTHUMP00000017974" FT /product="triggering receptor expressed on myeloid FT cells-like 2" FT /note="match: proteins: Tr:Q9H8E9" FT /protein_id="CAI19909.1" FT /translation="MNPCGWLGAVGPTLPHFPKWAASLLEPRVLPWQAQVAHPVSGGPS FT PWISRPDTAQLDGTMAPAFLLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKG FT YKNRVEGKVWCKIRKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYW FT CMRNTSGILYPLMGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTT FT GVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSS FT AGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLM FT LIMVYGFWKKRHMASYSMCSDPSTRDPPGRPEPYVEVYLI" FT mRNA complement(join(41158015..41160244,41160539..41160639, FT 41162163..41162571,41165847..41166167, FT AL391903.15:2758..>2989)) FT /gene="TREML2" FT /locus_tag="RP1-238O23.6-001" FT /product="triggering receptor expressed on myeloid FT cells-like 2" FT /note="match: cDNAs: Em:AK023755 Em:AK023755.1" FT /note="match: ESTs: Em:AU140201 Em:BI052447 Em:BI827715" FT polyA_signal complement(41158863..41158868) FT polyA_site complement(41158015) FT mRNA complement(join(<41126245..41126518,41127530..41127620, FT 41129001..41129351,41130781..41130924)) FT /gene="TREM2" FT /locus_tag="RP1-238O23.2-002" FT /product="triggering receptor expressed on myeloid cells 2" FT /note="match: cDNAs: Em:AB062787" FT /note="match: ESTs: Em:AI301873" FT mRNA complement(join(41126245..41126518,41126611..41126804, FT 41127530..41127620,41129001..41129351,41130781..41130914)) FT /gene="TREM2" FT /locus_tag="RP1-238O23.2-001" FT /product="triggering receptor expressed on myeloid cells 2" FT /note="match: cDNAs: Em:AF213457.1 Em:AF213458.1 FT Em:AY024348.1 Em:AY024349.1" FT /note="match: ESTs: Em:AA115735 Em:AA133297 Em:AA569871 FT Em:AI148515 Em:AI301873 Em:AW304912 Em:AW517119 Em:AW974158 FT Em:BF343916 Em:BF889704 Em:BG570278 Em:BI918405 Em:N30858 FT Em:N41388 Em:N50741" FT CDS complement(join(41126502..41126518,41126611..41126804, FT 41127530..41127620,41129001..41129351,41130781..41130820)) FT /gene="TREM2" FT /locus_tag="RP1-238O23.2-001" FT /standard_name="OTTHUMP00000016368" FT /product="triggering receptor expressed on myeloid cells 2" FT /note="match: proteins: Sw:Q99NH8 Sw:Q99NH8 Sw:Q9NZC2 FT Sw:Q9NZC2" FT /protein_id="CAI19911.1" FT /translation="MEPLRLLILLFVTELSGAHNTTVFQGVAGQSLQVSCPYDSMKHWG FT RRKAWCRQLGEKGPCQRVVSTHNLWLLSFLRRWNGSTAITDDTLGGTLTITLRNLQPHD FT AGLYQCQSLHGSEADTLRKVLVEVLADPLDHRDAGDLWFPGESESFEDAHVEHSISRSL FT LEGEIPFPPTSILLLLACIFLIKILAASALWAAAWHGQKPGTHPPSELDCGHDPGYQLQ FT TLPGLRDT" FT CDS complement(join(<41126502..41126518,41127530..41127620, FT 41129001..41129351,41130781..41130820)) FT /gene="TREM2" FT /locus_tag="RP1-238O23.2-002" FT /standard_name="OTTHUMP00000016369" FT /product="triggering receptor expressed on myeloid cells 2" FT /note="match: proteins: Sw:Q9NZC2" FT /protein_id="CAI19912.1" FT /translation="MEPLRLLILLFVTELSGAHNTTVFQGVAGQSLQVSCPYDSMKHWG FT RRKAWCRQLGEKGPCQRVVSTHNLWLLSFLRRWNGSTAITDDTLGGTLTITLRNLQPHD FT AGLYQCQSLHGSEADTLRKVLVEVLADPLDHRDAGDLWFPGESESFEDAHVEHSISRAE FT RHV" FT polyA_signal complement(41126271..41126276) FT polyA_site complement(41126245) FT mRNA complement(join(41117001..41117656,41117999..41118051, FT 41118557..41118645,41119020..41119122,41121496..41121828, FT 41121984..41122036)) FT /locus_tag="RP1-238O23.3-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AK017256.1" FT CDS complement(join(41117342..41117656,41117999..41118051, FT 41118557..41118645,41119020..41119122,41121496..41121828, FT 41121984..41122026)) FT /locus_tag="RP1-238O23.3-001" FT /standard_name="OTTHUMP00000017858" FT /product="novel protein" FT /note="match: proteins: Tr:Q9D3N6" FT /protein_id="CAI19913.1" FT /translation="MGLTLLLLLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDV FT KAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGC FT MVDGARGPQILHRVSLNILPPEEEEETHKIGSLAENAFSDPAGSANPLEPSQDEKSIPL FT IWGAVLLVGLLVAAVVLFAVMAKRKQGNRLGVCGRFLSSRVSGMNPSSVVHHVSDSGPA FT AELPLDVPHIRLDSPPSFDNTTYTSLPLDSPSGKPSLPAPSSLPPLPPKVLVCSKPVTY FT ATVIFPGGNKGGGTSCGPAQNPPNNQTPSS" FT polyA_signal complement(41117100..41117105) FT polyA_site complement(41117001) FT polyA_site 41108573 FT polyA_site 41108571 FT mRNA complement(join(41107801..41107943,41108336..41108570)) FT /locus_tag="RP1-238O23.4-003" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA779915 Em:AI243114" FT mRNA complement(join(41107665..41107943,41108336..41108570)) FT /locus_tag="RP1-238O23.4-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE675084" FT mRNA complement(join(41107594..41107807,41108336..41108570)) FT /locus_tag="RP1-238O23.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI313501 Em:AI674126 Em:AI707887 FT Em:AW665679" FT polyA_signal 41108547..41108552 FT CDS join(41077452..41077643,41078962..41079060, FT 41085037..41085121,41085215..41085404,41085868..41085923, FT 41086693..41086846,41087013..41087202,41088037..41088168, FT 41088170..41088184,41088186..41088395,41088397..41088478, FT 41090716..41090988,41092249..41092468,41100033..41100264, FT 41100614..41100739,41102296..41102468,41102924..41103125, FT 41105134..41105299,41105546..41105642,41105962..41106080, FT 41106347..41106465) FT /pseudo FT /locus_tag="RP1-238O23.5-001" FT /product="soluble adenylyl cyclase (SAC) pseudogene" FT /note="match: proteins: Tr:Q96PN6 Tr:Q9NNX0 Tr:Q9Z286" FT misc_feature complement(41076526) FT /note="Clone_left_end: RP1-238O23" FT misc_feature 41167935..41256750 FT /note="annotated region of clone" FT CDS join(complement(41168692..41168923),AL133404.8:1768..2088, FT AL133404.8:5364..5772,AL133404.8:7296..7396, FT AL133404.8:7691..7770) FT /gene="TREML2" FT /locus_tag="RP1-238O23.6-001" FT /standard_name="OTTHUMP00000017974" FT /product="triggering receptor expressed on myeloid FT cells-like 2" FT /note="match: proteins: Tr:Q08AP8.1 Tr:Q08AP9.1" FT /protein_id="CAI19858.1" FT /translation="MNPCGWLGAVGPTLPHFPKWAASLLEPRVLPWQAQVAHPVSGGPS FT PWISRPDTAQLDGTMAPAFLLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKG FT YKNRVEGKVWCKIRKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYW FT CMRNTSGILYPLMGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTT FT GVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSS FT AGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLM FT LIMVYGFWKKRHMASYSMCSDPSTRDPPGRPEPYVEVYLI" FT mRNA join(complement(41168692..41168932),AL133404.8:1768..2088, FT AL133404.8:5364..5772,AL133404.8:7296..7396, FT AL133404.8:7691..9920) FT /gene="TREML2" FT /locus_tag="RP1-238O23.6-001" FT /product="triggering receptor expressed on myeloid FT cells-like 2" FT /note="match: cDNAs: Em:AK023755 Em:AK023755.1" FT /note="match: ESTs: Em:AU140201 Em:BI052447 Em:BI827715 FT Em:DA858966.1" FT misc_feature 41185033 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 720bp by restriction digest data" FT misc_feature 41185034..41185249 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT CDS complement(41185217..41185685) FT /pseudo FT /locus_tag="RP1-229K20.2-001" FT /product="NKP44 pseudogene" FT /note="match: proteins: Sw:O95944" FT misc_feature 41185351..41185380 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT CDS 41196485..41196999 FT /pseudo FT /locus_tag="RP1-229K20.3-001" FT /product="NKP44 pseudogene" FT /note="match: proteins: Sw:O95944" FT misc_feature 41199919..41199929 FT /note="Sequence confirmed by AC023320 sequenced by WIBR" FT CDS join(41215107..41215361,41217067..41217387) FT /pseudo FT /locus_tag="RP1-229K20.6-001" FT /product="triggering receptor expressed on myeloid FT cells-like 2 pseudogene" FT /note="match: proteins: Sw:Q2LA85.1 Sw:Q5RDA5.1 Sw:Q5T2D2.2 FT Sw:Q9NP99.1" FT CDS complement(41237613..41237977) FT /pseudo FT /locus_tag="RP1-229K20.5-001" FT /product="triggering receptor expressed on myeloid cells 1 FT (TREM1) pseudogene" FT /note="match: proteins: Sw:Q9NP99" FT polyA_site complement(41243712) FT polyA_signal complement(41243753..41243758) FT mRNA complement(join(41243712..41243968,41248699..41248891, FT 41250133..41250489,41254345..41254457)) FT /gene="TREM1" FT /locus_tag="RP1-229K20.1-001" FT /product="triggering receptor expressed on myeloid cells 1" FT /note="match: ESTs: Em:AI337247 Em:AI681036 Em:AW274906 FT Em:AW972331 Em:BE328194 Em:BE348713 Em:BE784422 Em:BG004659 FT Em:BG236174 Em:BG539510 Em:BI821927 Em:BI910026 Em:D78812" FT /note="match: cDNAs: Em:AF196329 Em:AF287008" FT CDS complement(join(41243863..41243968,41248699..41248891, FT 41250133..41250489,41254345..41254393)) FT /gene="TREM1" FT /locus_tag="RP1-229K20.1-001" FT /standard_name="OTTHUMP00000016370" FT /product="triggering receptor expressed on myeloid cells 1" FT /note="match: proteins: Sw:Q9NP99" FT /protein_id="CAI19864.1" FT /translation="MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTL FT EKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQ FT VEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTKALC FT PLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIRVPVFNIVILLAGGFLSKSLVFS FT VLFAVTLRSFVP" FT misc_feature 41256751..41283003 FT /note="annotated region of clone" FT misc_feature 41258750 FT /note="Clone_right_end: RP1-229K20" FT CDS complement(41275904..41276303) FT /pseudo FT /locus_tag="RP13-235E23.1-001" FT /product="ribosomal protein L32 (RPL32) pseudogene" FT /note="match: proteins: Sw:P04359 Sw:P17932 Sw:P61128 FT Sw:P62912 Sw:P84311 Sw:P84323 Sw:Q94460 Sw:Q962T1 FT Tr:Q9TTX8" FT misc_feature 41281004 FT /note="Clone_left_end: RP1-149M18" FT misc_feature 41283004..41396298 FT /note="annotated region of clone" FT mRNA join(41303393..41303666,41303825..41304166, FT 41309532..41309667,41309774..41309887,41310656..41310762, FT 41318416..41318596) FT /gene="NCR2" FT /locus_tag="RP1-149M18.2-001" FT /product="natural cytotoxicity triggering receptor 2" FT /note="match: cDNAs: Em:AJ010099" FT mRNA join(41303527..41303666,41303825..41304166, FT 41309532..41309667,41309774..41309887,41318416..41318625) FT /gene="NCR2" FT /locus_tag="RP1-149M18.2-003" FT /product="natural cytotoxicity triggering receptor 2" FT /note="match: cDNAs: Em:AJ225109.1" FT mRNA join(41303589..41303666,41303825..41304166, FT 41309532..41309667,41309738..41309887,41310656..41310762, FT 41318416..41318602) FT /gene="NCR2" FT /locus_tag="RP1-149M18.2-002" FT /product="natural cytotoxicity triggering receptor 2" FT /note="match: cDNAs: Em:AJ010100.1" FT CDS join(41303615..41303666,41303825..41304166, FT 41309532..41309667,41309774..41309887,41310656..41310762, FT 41318416..41318441) FT /gene="NCR2" FT /locus_tag="RP1-149M18.2-001" FT /standard_name="OTTHUMP00000016371" FT /product="natural cytotoxicity triggering receptor 2" FT /note="match: proteins: Sw:O95944-3.1" FT /protein_id="CAC09453.3" FT /translation="MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPT FT GSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDS FT GHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGAR FT QAPESPSTIPVPSQPQNSTLRPGPAAPIALVPVFCGLLVAKSLVLSALLVWWVLRNRHM FT QHQGRSLLHPAQPRPQAHRHFPLSHRAPGGTYGGKP" FT CDS join(41303615..41303666,41303825..41304166, FT 41309532..41309667,41309738..41309887,41310656..41310762, FT 41318416..41318441) FT /gene="NCR2" FT /locus_tag="RP1-149M18.2-002" FT /standard_name="OTTHUMP00000016372" FT /product="natural cytotoxicity triggering receptor 2" FT /note="match: proteins: Sw:O95944-2.1" FT /protein_id="CAC09452.3" FT /translation="MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPT FT GSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDS FT GHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGAR FT QAPESPSTIPVPSHPSSPLPVPLPSRPQNSTLRPGPAAPIALVPVFCGLLVAKSLVLSA FT LLVWWVLRNRHMQHQGRSLLHPAQPRPQAHRHFPLSHRAPGGTYGGKP" FT CDS join(41303615..41303666,41303825..41304166, FT 41309532..41309667,41309774..41309887,41318416..41318602) FT /gene="NCR2" FT /locus_tag="RP1-149M18.2-003" FT /standard_name="OTTHUMP00000016373" FT /product="natural cytotoxicity triggering receptor 2" FT /note="match: proteins: Sw:O95944" FT /protein_id="CAC09454.3" FT /translation="MAWRALHPLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPT FT GSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDS FT GHYWCRIYRPSDNSVSKSVRFYLVVSPASASTQTSWTPRDLVSSQTQTQSCVPPTAGAR FT QAPESPSTIPVPSQPQNSTLRPGPAAPIALVPVFCGLLVAKSLVLSALLVWWGDIWWKT FT MMELRSLDTQKATCHLQQVTDLPWTSVSSPVEREILYHTVARTKISDDDDEHTL" FT polyA_site complement(41349130) FT mRNA complement(41349130..41349570) FT /locus_tag="RP1-149M18.3-001" FT /product="TEC gene" FT /note="match: ESTs: Em:AA634333.1 Em:AA707371.1 FT Em:AA905189.1 Em:AI191628.1 Em:AI221364.1 Em:AI910990.1 FT Em:AW188090.1" FT polyA_signal complement(41349144..41349149) FT mRNA 41373557..41374299 FT /locus_tag="RP1-149M18.4-001" FT /product="TEC gene" FT /note="match: ESTs: Em:AA431497.1 Em:AA431704.1 FT Em:BX115156.1" FT polyA_signal 41374281..41374286 FT polyA_site 41374299 FT misc_feature 41378745 FT /note="Clone_left_end: RP11-328M4" FT misc_feature 41394298 FT /note="Clone_right_end: RP1-149M18" FT misc_feature 41396299..41576745 FT /note="annotated region of clone" FT mRNA join(41470182..41470349,41470541..41470711, FT 41487114..41487590) FT /locus_tag="RP11-328M4.3-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:DQ141194.1" FT mRNA join(41486111..41486293,41487114..41487590) FT /locus_tag="RP11-328M4.3-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AY927638.1" FT polyA_site complement(41491633) FT polyA_site complement(41491643) FT polyA_signal complement(41491660..41491665) FT misc_feature 41497300 FT /note="Clone_left_end: RP5-1092C14" FT mRNA complement(join(41491635..41491963,41513738..41513812)) FT /locus_tag="RP11-328M4.2-005" FT /product="novel transcript" FT /note="match: ESTs: Em:AI831910.1" FT mRNA complement(join(41462591..41462631,41513827..41513981)) FT /locus_tag="RP11-328M4.2-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BQ082169.1" FT mRNA complement(join(41491633..41491963,41513827..41513914)) FT /locus_tag="RP11-328M4.2-004" FT /product="novel transcript" FT /note="match: ESTs: Em:BE936782.1 Em:BF341848.1 FT Em:BG028463.1" FT mRNA join(41514164..41514605,41533483..41533702, FT 41545724..41545819,41552507..41552629,41553169..41553255, FT 41554747..41554894,41555040..41555250,41555531..41555635, FT 41556382..41556469,41557509..41557592,41557737..41557908, FT 41558009..41558085,41558959..41559060,41562608..41562729, FT 41564914..41564980,41565519..41565688,41566527..41570122) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-001" FT /product="forkhead box P4" FT /note="match: ESTs: Em:AA961116.1 Em:AI458736.1 FT Em:AI499223.1 Em:AI656883.1 Em:BE551777.1 Em:BM470031.1 FT Em:BM479242.1 Em:BQ937280.1 Em:BQ941404.1 Em:BU154206.1 FT Em:BU556589.1" FT /note="match: cDNAs: Em:AL832437.1 Em:BC013030.2 FT Em:BC040962.1" FT mRNA join(41514311..41514605,41533483..41533702, FT 41545724..41545819,41552507..41552629,41553169..41553255, FT 41554747..41554894,41555037..41555250,41555531..41555635, FT 41556382..41556469,41557509..41557592,41557737..41557908, FT 41558009..41558085,41558959..41559060,41562608..41562729, FT 41564914..41564980,41565519..41565688,41566527..41567697) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-006" FT /product="forkhead box P4" FT /note="match: cDNAs: Em:AK143194.1" FT /note="match: ESTs: Em:BU556589.1" FT mRNA join(41514386..41514605,41533483..41533702, FT 41545724..41545819,41552507..41552629,41553175..41553255, FT 41554747..41554894,41555037..41555250,41555531..41555635, FT 41556382..41556469,41557509..41557592,41557701..41557908, FT 41558009..41558085,41558959..41559060,41562608..41562729, FT 41564914..41564980,41565519..41565688,41566527..41567701) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-003" FT /product="forkhead box P4" FT /note="match: ESTs: Em:BQ941404.1" FT /note="match: cDNAs: Em:BC052803.1" FT mRNA complement(join(41491643..41491963,41515199..41515286)) FT /locus_tag="RP11-328M4.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BQ128057.1 Em:BQ128322.1 FT Em:BQ549511.1 Em:BQ581389.1" FT mRNA complement(join(41491633..41491963,41516116..41516359)) FT /locus_tag="RP11-328M4.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF194903.1 Em:BQ581638.1 FT Em:BQ581966.1" FT mRNA join(41533487..41533702,41545724..41545819, FT 41552507..41552629,41553169..41553255,41554747..41554894, FT 41555037..41555250,41555531..41555635,41556382..41556469, FT 41557509..41557592,41557701..41557908,41558009..41558085, FT 41558959..41559060,41562608..41562729,41564914..41564980, FT 41565519..41565688,41566527..41568364) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-002" FT /product="forkhead box P4" FT /note="match: cDNAs: Em:AB080747.1" FT CDS join(41533499..41533702,41545724..41545819, FT 41552507..41552629,41553169..41553255,41554747..41554894, FT 41555037..41555250,41555531..41555635,41556382..41556469, FT 41557509..41557592,41557737..41557908,41558009..41558085, FT 41558959..41559060,41562608..41562729,41564914..41564980, FT 41565519..41565688,41566527..41566674) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-006" FT /standard_name="OTTHUMP00000203950" FT /product="forkhead box P4" FT /protein_id="CAX15206.1" FT /translation="MMVESASETIRSAPSGQNGVGSLSGQADGSSGGATGTTASGTGRE FT VTTGADSNGEMSPAELLHFQQQQALQVARQFLLQQASGLSSPGNNDSKQSASAVQVPVS FT VAMMSPQMLTPQQMQQILSPPQLQALLQQQQALMLQQLQEYYKKQQEQLHLQLLTQQQA FT GKPQPKEALGNKQLAFQQQLLQMQQLQQQHLLNLQRQGLVSLQPNQASGPLQTLPQAAV FT CPTDLPQLWKGEGAPGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQ FT PTVLTSRRDSSSHEETPGSHPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTA FT QCRVQMQVVQQLEIQLAKESERLQAMMAHLHMRPSEPKPFSQPVTVSAADSFPDGLVHP FT PTSAAAPVTPLRPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVRPPF FT TYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVE FT NVKGAVWTVDEREYQKRRPPKMTGSPTLVKNMISGLSYGALNASYQAALAESSFPLLNS FT PGMLNPGSASSLLPLSHDDVGAPVEPLPSNGSSSPPRLSPPQYSHQVQVKEEPAEAEED FT RQPGPPLGAPNPSASGPPEDRDLEEELPGEELS" FT CDS join(41533499..41533702,41545724..41545819, FT 41552507..41552629,41553169..41553255,41554747..41554894, FT 41555040..41555250,41555531..41555635,41556382..41556469, FT 41557509..41557592,41557737..41557908,41558009..41558085, FT 41558959..41559060,41562608..41562729,41564914..41564980, FT 41565519..41565688,41566527..41566674) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-001" FT /standard_name="OTTHUMP00000016374" FT /product="forkhead box P4" FT /note="match: proteins: Tr:Q8IW55" FT /protein_id="CAH72541.1" FT /translation="MMVESASETIRSAPSGQNGVGSLSGQADGSSGGATGTTASGTGRE FT VTTGADSNGEMSPAELLHFQQQQALQVARQFLLQQASGLSSPGNNDSKQSASAVQVPVS FT VAMMSPQMLTPQQMQQILSPPQLQALLQQQQALMLQQLQEYYKKQQEQLHLQLLTQQQA FT GKPQPKEALGNKQLAFQQQLLQMQQLQQQHLLNLQRQGLVSLQPNQASGPLQTLPQAVC FT PTDLPQLWKGEGAPGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQP FT TVLTSRRDSSSHEETPGSHPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQ FT CRVQMQVVQQLEIQLAKESERLQAMMAHLHMRPSEPKPFSQPVTVSAADSFPDGLVHPP FT TSAAAPVTPLRPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVRPPFT FT YASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVEN FT VKGAVWTVDEREYQKRRPPKMTGSPTLVKNMISGLSYGALNASYQAALAESSFPLLNSP FT GMLNPGSASSLLPLSHDDVGAPVEPLPSNGSSSPPRLSPPQYSHQVQVKEEPAEAEEDR FT QPGPPLGAPNPSASGPPEDRDLEEELPGEELS" FT CDS join(41533499..41533702,41545724..41545819, FT 41552507..41552629,41553175..41553255,41554747..41554894, FT 41555037..41555250,41555531..41555635,41556382..41556469, FT 41557509..41557592,41557701..41557908,41558009..41558085, FT 41558959..41559060,41562608..41562729,41564914..41564980, FT 41565519..41565688,41566527..41566674) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-003" FT /standard_name="OTTHUMP00000043412" FT /product="forkhead box P4" FT /note="match: proteins: Tr:Q7Z7F8" FT /protein_id="CAH72542.1" FT /translation="MMVESASETIRSAPSGQNGVGSLSGQADGSSGGATGTTASGTGRE FT VTTGADSNGEMSPAELLHFQQQQALQVARQFLLQQASGLSSPGNNDSKQSASAVQVPVS FT VAMMSPQMLTPQQMQQILSPPQLQALLQQQQALMLQQEYYKKQQEQLHLQLLTQQQAGK FT PQPKEALGNKQLAFQQQLLQMQQLQQQHLLNLQRQGLVSLQPNQASGPLQTLPQAAVCP FT TDLPQLWKGEGAPGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQPT FT VLTSRRDSSSHEETPGSHPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQC FT RVQMQVVQQLEIQLAKESERLQAMMAHLHMRPSEPKPFSQPLNPVPGSSSFSKVTVSAA FT DSFPDGLVHPPTSAAAPVTPLRPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNHEF FT YKNADVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNL FT SLHKCFVRVENVKGAVWTVDEREYQKRRPPKMTGSPTLVKNMISGLSYGALNASYQAAL FT AESSFPLLNSPGMLNPGSASSLLPLSHDDVGAPVEPLPSNGSSSPPRLSPPQYSHQVQV FT KEEPAEAEEDRQPGPPLGAPNPSASGPPEDRDLEEELPGEELS" FT CDS join(41533499..41533702,41545724..41545819, FT 41552507..41552629,41553169..41553255,41554747..41554894, FT 41555037..41555250,41555531..41555635,41556382..41556469, FT 41557509..41557592,41557701..41557908,41558009..41558085, FT 41558959..41559060,41562608..41562729,41564914..41564980, FT 41565519..41565688,41566527..41566674) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-002" FT /standard_name="OTTHUMP00000043536" FT /product="forkhead box P4" FT /note="match: proteins: Sw:Q8IVH2" FT /protein_id="CAH72540.1" FT /translation="MMVESASETIRSAPSGQNGVGSLSGQADGSSGGATGTTASGTGRE FT VTTGADSNGEMSPAELLHFQQQQALQVARQFLLQQASGLSSPGNNDSKQSASAVQVPVS FT VAMMSPQMLTPQQMQQILSPPQLQALLQQQQALMLQQLQEYYKKQQEQLHLQLLTQQQA FT GKPQPKEALGNKQLAFQQQLLQMQQLQQQHLLNLQRQGLVSLQPNQASGPLQTLPQAAV FT CPTDLPQLWKGEGAPGQPAEDSVKQEGLDLTGTAATATSFAAPPKVSPPLSHHTLPNGQ FT PTVLTSRRDSSSHEETPGSHPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTA FT QCRVQMQVVQQLEIQLAKESERLQAMMAHLHMRPSEPKPFSQPLNPVPGSSSFSKVTVS FT AADSFPDGLVHPPTSAAAPVTPLRPPGLGSASLHGGGPARRRSSDKFCSPISSELAQNH FT EFYKNADVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRH FT NLSLHKCFVRVENVKGAVWTVDEREYQKRRPPKMTGSPTLVKNMISGLSYGALNASYQA FT ALAESSFPLLNSPGMLNPGSASSLLPLSHDDVGAPVEPLPSNGSSSPPRLSPPQYSHQV FT QVKEEPAEAEEDRQPGPPLGAPNPSASGPPEDRDLEEELPGEELS" FT mRNA join(41537912..41538132,41545724..41545819, FT 41552507..>41552556) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-004" FT /product="forkhead box P4" FT /note="match: cDNAs: Em:DQ656018.2" FT CDS join(41538016..41538132,41545724..41545819, FT 41552507..>41552556) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-004" FT /standard_name="OTTHUMP00000174733" FT /product="forkhead box P4" FT /protein_id="CAM17127.1" FT /translation="MEGELGPALSRGEAYGHHTSSYQLLGNAQKLPFPPWPDTALQVAR FT QFLLQQASGLSSPGNNDSKQSASAVQVPVSVAMMSPQMLTPQ" FT mRNA join(41555181..41555250,41555531..41555635, FT 41556382..41556469,41557509..41557592,41557737..41557908, FT 41558009..41558085,41558959..41559060,41562608..41562729, FT 41564914..41564980,41565519..41565654,41567562..41567704) FT /gene="FOXP4" FT /locus_tag="RP11-328M4.1-005" FT /product="forkhead box P4" FT /note="match: cDNAs: Em:BC016874.1" FT polyA_signal 41568341..41568346 FT polyA_site 41568364 FT polyA_signal 41570102..41570107 FT polyA_site 41570122 FT misc_feature 41576645 FT /note="Clone_right_end: RP11-328M4" FT misc_feature 41588689 FT /note="Clone_left_end: RP4-696P19" FT misc_feature complement(41588889..41697454) FT /note="annotated region of clone" FT mRNA complement(join(41654267..41654907,41655491..41655547, FT 41655646..41655766,41657469..41657549,41658401..41658655, FT 41658739..41658973,AL365205.35:2933..4137)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-004" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AK095061.1" FT /note="match: ESTs: Em:AW403937.1 Em:BQ049410.1" FT mRNA complement(join(<41658916..41658973, FT AL365205.35:3948..4112)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-013" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608789.1" FT mRNA complement(join(<41658632..41658655,41658739..41658973, FT AL365205.35:2933..3023,AL365205.35:3948..3974)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-014" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608790.1" FT mRNA complement(join(<41658916..41658973, FT AL365205.35:4369..4478)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-012" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608788.1" FT mRNA complement(join(<41654832..41654907,41655491..41655547, FT 41655646..41655766,41657469..41657549,41658401..41658655, FT 41658739..41658973,AL365205.35:4597..4685)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-006" FT /product="transcription factor EB" FT /note="match: ESTs: Em:BQ932979.1 Em:BU527754.1" FT mRNA complement(join(<41658854..41658973, FT AL365205.35:5184..5344)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-011" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608787.1" FT mRNA complement(join(41651716..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658401..41658655,41658739..41658973, FT AL365205.35:2933..3051,AL365205.35:5184..5344)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-001" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:BC032448.1" FT /note="match: ESTs: Em:BI823162.1" FT mRNA complement(join(41651718..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658401..41658655,41658739..41658973, FT AL365205.35:5634..5892)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-005" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AK078755.1 Em:M33782.1" FT /note="match: ESTs: Em:AL555170.2 Em:BE677782.1" FT CDS complement(join(41652337..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658401..41658655,41658739..41658973, FT AL365205.35:6430..6449)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-010" FT /standard_name="OTTHUMP00000071327" FT /product="transcription factor EB" FT /protein_id="CAQ07961.1" FT /translation="MTASSGWEPAPAATMASRIGLRMQLMREQAQQEEQRERMQQQAVM FT HYMQQQQQQQQQQLGGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQ FT KVREYLSETYGNKFAAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHI FT GSNPERELDDVIDNIMRLDDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVT FT SSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKAND FT LDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVH FT GLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLPT FT QPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLP FT LASDPLLSTMSPEASKASSRRSSFSMEEGDVL" FT mRNA complement(join(41651716..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658401..41658655,41658739..41658973, FT AL365205.35:6430..6543)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-010" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608786.1" FT mRNA complement(join(<41654901..41654907,41655491..41655547, FT 41655646..41655766,41657469..41657549,41658401..41658655, FT 41658739..41658973,41691199..41691464)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-008" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608791.2" FT /note="match: ESTs: Em:BI757401.1" FT mRNA join(41688134..41688426,AL365205.35:4202..4316) FT /locus_tag="RP11-298J23.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG996502.1" FT mRNA complement(join(<41658739..41658973,41684905..41685009)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-016" FT /product="transcription factor EB" FT mRNA complement(join(<41658739..41658973,41673385..41673490, FT 41673655..41673678)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-009" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608793.1" FT mRNA complement(join(<41655648..41655766,41657469..41657549, FT 41658401..41658655,41658739..41658973,41673385..41673678)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-002" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608794.1" FT /note="match: ESTs: Em:BQ226772.1" FT mRNA complement(join(41651716..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658401..41658655,41658739..>41659214)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-015" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AF079095.1 Em:AK146016.1 FT Em:BC064789.1" FT CDS complement(join(41652337..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658401..41658655,41658739..41659209)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-015" FT /standard_name="OTTHUMP00000196417" FT /product="transcription factor EB" FT /protein_id="CAQ07962.1" FT /translation="MSEEDRTFSFGPGTRKLGFMSQLSPACSVTLGKSLPLSGLGVFSS FT KMDAVPVILASPCQPLCFEEDTCLIYLLPLLIHREPAPAATMASRIGLRMQLMREQAQQ FT EEQRERMQQQAVMHYMQQQQQQQQQQLGGPPTPAINTPVHFQSPPPVPGEVLKVQSYLE FT NPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPPPAASPGVRAGHVLSSSAG FT NSAPNSPMAMLHIGSNPERELDDVIDNIMRLDDVLGYINPEMQMPNTLPLSSSHLNVYS FT SDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERRRRFNINDR FT IKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLW FT LRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPL FT PALPPQAPLPLPTQPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKK FT DLDLMLLDDSLLPLASDPLLSTMSPEASKASSRRSSFSMEEGDVL" FT CDS complement(<41658916..41658951) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-012" FT /standard_name="OTTHUMP00000071330" FT /product="transcription factor EB" FT /protein_id="CAI95733.1" FT /translation="MASRIGLRMQLM" FT CDS complement(<41658854..41658951) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-011" FT /standard_name="OTTHUMP00000071329" FT /product="transcription factor EB" FT /protein_id="CAI95734.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMH" FT CDS complement(<41658739..41658951) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-009" FT /standard_name="OTTHUMP00000071326" FT /product="transcription factor EB" FT /protein_id="CAI95735.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQL FT GGPPTPAINTPVHFQSPPPVPGEVLK" FT CDS complement(join(<41658632..41658655,41658739..41658951)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-014" FT /standard_name="OTTHUMP00000071332" FT /product="transcription factor EB" FT /protein_id="CAI95736.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQL FT GGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENP" FT CDS complement(join(<41655648..41655766,41657469..41657549, FT 41658401..41658655,41658739..41658951)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-002" FT /standard_name="OTTHUMP00000043539" FT /product="transcription factor EB" FT /protein_id="CAI22453.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQL FT GGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKF FT AAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDN FT IMRLDDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKREL FT T" FT CDS complement(join(<41654901..41654907,41655491..41655547, FT 41655646..41655766,41657469..41657549,41658401..41658655, FT 41658739..41658951)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-008" FT /standard_name="OTTHUMP00000071325" FT /product="transcription factor EB" FT /protein_id="CAI95737.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQL FT GGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKF FT AAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDN FT IMRLDDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKREL FT TDAESRALAKERQKKDNHNLIE" FT CDS complement(join(<41654832..41654907,41655491..41655547, FT 41655646..41655766,41657469..41657549,41658401..41658655, FT 41658739..41658951)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-006" FT /standard_name="OTTHUMP00000043541" FT /product="transcription factor EB" FT /protein_id="CAI22454.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQL FT GGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKF FT AAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDN FT IMRLDDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKREL FT TDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDL" FT CDS complement(join(41654828..41654907,41655491..41655547, FT 41655646..41655766,41657469..41657549,41658401..41658655, FT 41658739..41658951)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-004" FT /standard_name="OTTHUMP00000196419" FT /product="transcription factor EB" FT /protein_id="CAO72131.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQL FT GGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKF FT AAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDN FT IMRLDDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKREL FT TDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDL" FT CDS complement(join(41652337..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658401..41658655,41658739..41658951)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-001" FT /standard_name="OTTHUMP00000043542" FT /product="transcription factor EB" FT /note="match: proteins: Sw:P19484" FT /protein_id="CAD92604.1" FT /translation="MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQL FT GGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKF FT AAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDN FT IMRLDDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKREL FT TDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKAS FT VDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGMNMAE FT LAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLPTQPPSPFHHLDFSHS FT LSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLPLASDPLLSTMSPEA FT SKASSRRSSFSMEEGDVL" FT CDS complement(join(41652337..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658739..>41658780)) FT /codon_start=1 FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-003" FT /standard_name="OTTHUMP00000016379" FT /product="transcription factor EB" FT /protein_id="CAI22455.1" FT /translation="HFQSPPPVPGEVLKLDDVIDNIMRLDDVLGYINPEMQMPNTLPLS FT SSHLNVYSSDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERR FT RRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRL FT EMTNKQLWLRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGA FT EVPDPEPLPALPPQAPLPLPTQPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGS FT PFPSLSKKDLDLMLLDDSLLPLASDPLLSTMSPEASKASSRRSSFSMEEGDVL" FT mRNA complement(join(41651716..41652816,41653828..41653975, FT 41654832..41654907,41655491..41655547,41655646..41655766, FT 41657469..41657549,41658739..>41658780)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-003" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:BC006225.1" FT /note="match: ESTs: Em:BE799739" FT mRNA complement(join(41654832..41654907,41655491..41655938)) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-007" FT /product="transcription factor EB" FT /note="match: ESTs: Em:BG953092.1" FT polyA_signal complement(41651730..41651735) FT polyA_site complement(41651716) FT CDS 41634644..41635387 FT /pseudo FT /locus_tag="RP4-696P19.2-001" FT /product="nucleophosmin (nucleolar phosphoprotein B23, FT numatrin) (NPM1) pseudogene" FT /note="match: proteins: Em:CE02690 Sw:O42584 Sw:O75607 FT Sw:P05221 Sw:P06748 Sw:P07222 Sw:P13084 Sw:P16039 Sw:P91753 FT Sw:Q61937 Tr:Q91802" FT polyA_site 41621984 FT polyA_site 41621982 FT polyA_signal 41621960..41621965 FT mRNA join(41613992..41614046,41617357..41617850) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-004" FT /product="MyoD family inhibitor" FT /note="match: ESTs: Em:BG004024.1" FT CDS join(41606488..41606563,41613864..41614046, FT 41617357..41617581,41621057..41621313) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-001" FT /standard_name="OTTHUMP00000016375" FT /product="MyoD family inhibitor" FT /note="match: proteins: Sw:Q99750" FT /protein_id="CAB54148.1" FT /translation="MYQVSGQRPSGCDAPYGAPSAAPGPAQTLSLLPGLEVVTGSTHPA FT EAAPEEGSLEEAATPMPQGNGPGIPQGLDSTDLDVPTEAVTCQPQGNPLGCTPLLPNDS FT GHPSELGGTRRAGNGALGGPKAHRKLQTHPSLASQGSKKSKSSSKSTTSQIPLQAQEDC FT CVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCLCCCCCGSGECADCDLPCDLDCGI FT LDACCESADCLEICMECCGLCFSS" FT CDS join(41606488..41606563,41617357..41617581, FT 41621057..41621313) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-002" FT /standard_name="OTTHUMP00000016376" FT /product="MyoD family inhibitor" FT /protein_id="CAD92607.1" FT /translation="MYQVSGQRPSGCDAPYGAPSAAPGPGQPQGNPLGCTPLLPNDSGH FT PSELGGTRRAGNGALGGPKAHRKLQTHPSLASQGSKKSKSSSKSTTSQIPLQAQEDCCV FT HCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCLCCCCCGSGECADCDLPCDLDCGILD FT ACCESADCLEICMECCGLCFSS" FT CDS join(41606488..41606563,41613864..41614046, FT 41617357..41617581,41621057..>41621266) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-003" FT /standard_name="OTTHUMP00000043543" FT /product="MyoD family inhibitor" FT /protein_id="CAI22456.1" FT /translation="MYQVSGQRPSGCDAPYGAPSAAPGPAQTLSLLPGLEVVTGSTHPA FT EAAPEEGSLEEAATPMPQGNGPGIPQGLDSTDLDVPTEAVTCQPQGNPLGCTPLLPNDS FT GHPSELGGTRRAGNGALGGPKAHRKLQTHPSLASQGSKKSKSSSKSTTSQIPLQAQEDC FT CVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCLCCCCCGSGECADCDLPCDLDCGI FT LDACCESAD" FT CDS join(41606488..41606563,41613864..41614046, FT 41617357..41617581,41621057..>41621212) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-005" FT /standard_name="OTTHUMP00000196103" FT /product="MyoD family inhibitor" FT /protein_id="CAO72132.1" FT /translation="MYQVSGQRPSGCDAPYGAPSAAPGPAQTLSLLPGLEVVTGSTHPA FT EAAPEEGSLEEAATPMPQGNGPGIPQGLDSTDLDVPTEAVTCQPQGNPLGCTPLLPNDS FT GHPSELGGTRRAGNGALGGPKAHRKLQTHPSLASQGSKKSKSSSKSTTSQIPLQAQEDC FT CVHCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCLCCCCCGSGECADCD" FT mRNA join(41606265..41606563,41617357..41617581, FT 41621057..>41621182) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-007" FT /product="MyoD family inhibitor" FT /note="match: ESTs: Em:CN292546.1" FT CDS join(41606488..41606563,41617357..41617581, FT 41621057..>41621182) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-007" FT /standard_name="OTTHUMP00000196105" FT /product="MyoD family inhibitor" FT /protein_id="CAO72133.1" FT /translation="MYQVSGQRPSGCDAPYGAPSAAPGPGQPQGNPLGCTPLLPNDSGH FT PSELGGTRRAGNGALGGPKAHRKLQTHPSLASQGSKKSKSSSKSTTSQIPLQAQEDCCV FT HCILSCLFCEFLTLCNIVLDCATCGSCSSEDSCLCCCC" FT mRNA join(<41606237..41606563,41613864..41614046, FT 41617357..>41617481) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-006" FT /product="MyoD family inhibitor" FT /note="match: ESTs: Em:CN292550.1" FT CDS join(41606488..41606563,41613864..41614046, FT 41617357..>41617481) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-006" FT /standard_name="OTTHUMP00000196104" FT /product="MyoD family inhibitor" FT /protein_id="CAO72134.1" FT /translation="MYQVSGQRPSGCDAPYGAPSAAPGPAQTLSLLPGLEVVTGSTHPA FT EAAPEEGSLEEAATPMPQGNGPGIPQGLDSTDLDVPTEAVTCQPQGNPLGCTPLLPNDS FT GHPSELGGTRRAGNGALGGPKAHR" FT CDS join(41606488..41606563,41613864..41614046, FT 41617357..>41617391) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-009" FT /standard_name="OTTHUMP00000196415" FT /product="MyoD family inhibitor" FT /protein_id="CAO72135.1" FT /translation="MYQVSGQRPSGCDAPYGAPSAAPGPAQTLSLLPGLEVVTGSTHPA FT EAAPEEGSLEEAATPMPQGNGPGIPQGLDSTDLDVPTEAVTCQPQGNPLGCTP" FT mRNA join(<41606185..41606390,41606477..41606563, FT 41613864..41614046,41617357..41617581,41621057..41621984) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-001" FT /product="MyoD family inhibitor" FT /note="match: cDNAs: Em:BC007836.2 Em:U78313.1" FT /note="match: ESTs: Em:AA448213 Em:AI187139 Em:AI190979 FT Em:AI291578 Em:AI333262 Em:AI350023 Em:AI460226 Em:AI568654 FT Em:AI671191 Em:AI692917 Em:AI739229 Em:AI761536 FT Em:AL517892.2 Em:AL528623.2 Em:BM805047.1 Em:BX383173.1 FT Em:D31205 Em:D31342 Em:R42144 Em:R45169 Em:T47063 FT Em:W54345" FT mRNA join(<41606215..41606390,41606477..41606563, FT 41617357..41617581,41621057..41621377) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-002" FT /product="MyoD family inhibitor" FT /note="match: ESTs: Em:BI824391.1 Em:BM805047.1" FT mRNA join(41606176..41606223,41606477..41606563, FT 41613864..41614046,41617357..>41617391) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-009" FT /product="MyoD family inhibitor" FT mRNA join(<41604770..41605011,41605878..41606113, FT 41606477..41606563,41613864..41614046,41617357..41617581, FT 41621057..>41621266) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-003" FT /product="MyoD family inhibitor" FT /note="match: ESTs: Em:BX397111.1 Em:CA487393.1" FT mRNA join(<41604806..41605011,41606477..41606563, FT 41613864..41614046,41617357..41617581,41621057..>41621977) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-008" FT /product="MyoD family inhibitor" FT /note="match: cDNAs: Em:BC010259.1" FT mRNA join(<41604620..41604671,41606477..41606563, FT 41613864..41614046,41617357..41617581,41621057..>41621212) FT /gene="MDFI" FT /locus_tag="RP4-696P19.1-005" FT /product="MyoD family inhibitor" FT /note="match: ESTs: Em:DR157589.1" FT misc_feature 41697455..41804165 FT /note="annotated region of clone" FT misc_feature 41699454 FT /note="Clone_right_end: RP4-696P19" FT mRNA join(complement(41700387..41701591), FT AL035588.21:40481..40715,AL035588.21:40799..41053, FT AL035588.21:41905..41985,AL035588.21:43688..43808, FT AL035588.21:43907..43963,AL035588.21:44547..45187) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-004" FT /product="transcription factor EB" FT /note="match: ESTs: Em:AW403937.1 Em:BQ049410.1" FT /note="match: cDNAs: Em:AK095061.1" FT mRNA join(complement(41701402..41701566), FT AL035588.21:40481..>40538) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-013" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608789.1" FT mRNA join(complement(41701402..41701428), FT complement(41700387..41700477),AL035588.21:40481..40715, FT AL035588.21:40799..>40822) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-014" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608790.1" FT mRNA join(complement(41701823..41701932), FT AL035588.21:40481..>40538) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-012" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608788.1" FT mRNA join(complement(41702051..41702139), FT AL035588.21:40481..40715,AL035588.21:40799..41053, FT AL035588.21:41905..41985,AL035588.21:43688..43808, FT AL035588.21:43907..43963,AL035588.21:44547..>44622) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-006" FT /product="transcription factor EB" FT /note="match: ESTs: Em:BQ932979.1 Em:BU527754.1" FT misc_feature 41702212..41703081 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA join(complement(41702638..41702798), FT AL035588.21:40481..>40600) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-011" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608787.1" FT mRNA join(complement(41702638..41702798), FT complement(41700387..41700505),AL035588.21:40481..40715, FT AL035588.21:40799..41053,AL035588.21:41905..41985, FT AL035588.21:43688..43808,AL035588.21:43907..43963, FT AL035588.21:44547..44622,AL035588.21:45479..45626, FT AL035588.21:46638..47738) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-001" FT /product="transcription factor EB" FT /note="match: ESTs: Em:BI823162.1" FT /note="match: cDNAs: Em:BC032448.1" FT mRNA join(complement(41703088..41703346), FT AL035588.21:40481..40715,AL035588.21:40799..41053, FT AL035588.21:41905..41985,AL035588.21:43688..43808, FT AL035588.21:43907..43963,AL035588.21:44547..44622, FT AL035588.21:45479..45626,AL035588.21:46638..47736) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-005" FT /product="transcription factor EB" FT /note="match: ESTs: Em:AL555170.2 Em:BE677782.1" FT /note="match: cDNAs: Em:AK078755.1 Em:M33782.1" FT CDS join(complement(41703884..41703903), FT AL035588.21:40481..40715,AL035588.21:40799..41053, FT AL035588.21:41905..41985,AL035588.21:43688..43808, FT AL035588.21:43907..43963,AL035588.21:44547..44622, FT AL035588.21:45479..45626,AL035588.21:46638..47117) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-010" FT /standard_name="OTTHUMP00000071327" FT /product="transcription factor EB" FT /protein_id="CAX15120.1" FT /translation="MTASSGWEPAPAATMASRIGLRMQLMREQAQQEEQRERMQQQAVM FT HYMQQQQQQQQQQLGGPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQ FT KVREYLSETYGNKFAAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHI FT GSNPERELDDVIDNIMRLDDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGVT FT SSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKAND FT LDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVH FT GLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPLPT FT QPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLP FT LASDPLLSTMSPEASKASSRRSSFSMEEGDVL" FT mRNA join(complement(41703884..41703997), FT AL035588.21:40481..40715,AL035588.21:40799..41053, FT AL035588.21:41905..41985,AL035588.21:43688..43808, FT AL035588.21:43907..43963,AL035588.21:44547..44622, FT AL035588.21:45479..45626,AL035588.21:46638..47738) FT /gene="TFEB" FT /locus_tag="RP4-696P19.3-010" FT /product="transcription factor EB" FT /note="match: cDNAs: Em:AJ608786.1" FT polyA_site complement(41704449) FT polyA_signal complement(41704462..41704467) FT mRNA join(complement(AL035588.21:11028..11320), FT 41701656..41701770) FT /locus_tag="RP11-298J23.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG996502.1" FT misc_feature 41713669..41713778 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(41704450..41704563,41712178..41712252, FT 41712396..41712546,41715014..41715121)) FT /gene="PGC" FT /locus_tag="RP11-298J23.1-002" FT /product="progastricsin (pepsinogen C)" FT /note="match: cDNAs: Em:BC042578.1" FT mRNA complement(join(41704449..41704742,41705468..41705566, FT 41707537..41707684,41708229..41708348,41710028..41710227, FT 41711009..41711127,41712135..41712252,41712396..41712546, FT 41715014..41715135)) FT /gene="PGC" FT /locus_tag="RP11-298J23.1-001" FT /product="progastricsin (pepsinogen C)" FT /note="match: ESTs: Em:AA334924 Em:AA335226 Em:BE825888 FT Em:BI821132 Em:BM745165.1 Em:BM747993.1 Em:BM756131.1 FT Em:BM768237.1 Em:BM795731.1 Em:BM820309.1 Em:BM820369.1 FT Em:BM849061.1 Em:BM967012.1" FT /note="match: cDNAs: Em:AB038385.1 Em:J04443.1 Em:U75272.1" FT CDS complement(join(41704590..41704742,41705468..41705566, FT 41707537..41707684,41708229..41708348,41710028..41710227, FT 41711009..41711127,41712135..41712252,41712396..41712546, FT 41715014..41715072)) FT /gene="PGC" FT /locus_tag="RP11-298J23.1-001" FT /standard_name="OTTHUMP00000016377" FT /product="progastricsin (pepsinogen C)" FT /note="match: proteins: Sw:P03955 Sw:P04073 Sw:P20142 FT Sw:P81498 Sw:Q9GMY2 Sw:Q9GMY3 Sw:Q9N2D3" FT /protein_id="CAI13181.1" FT /translation="MKWMVVVLVCLQLLEAAVVKVPLKKFKSIRETMKEKGLLGEFLRT FT HKYDPAWKYRFGDLSVTYEPMAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYC FT QSQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLS FT ENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSG FT GAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSL FT LTVPQQYMSALLQATGAQEDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN FT GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA" FT mRNA complement(join(<41708340..41708348,41710028..41710227, FT 41712396..41712546,41715014..41715133)) FT /gene="PGC" FT /locus_tag="RP11-298J23.1-003" FT /product="progastricsin (pepsinogen C)" FT /note="match: ESTs: Em:BM790964.1" FT CDS complement(join(<41708340..41708348,41710028..41710227, FT 41712396..41712546,41715014..41715072)) FT /gene="PGC" FT /locus_tag="RP11-298J23.1-003" FT /standard_name="OTTHUMP00000071328" FT /product="progastricsin (pepsinogen C)" FT /protein_id="CAI95135.1" FT /translation="MKWMVVVLVCLQLLEAAVVKVPLKKFKSIRETMKEKGLLGEFLRT FT HKYDPAWKYRFGDLSVTYEPMAYMDVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLA FT YPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG" FT mRNA complement(join(<41712217..41712252,41712396..41712546, FT 41721636..41721847)) FT /gene="PGC" FT /locus_tag="RP11-298J23.1-004" FT /product="progastricsin (pepsinogen C)" FT /note="match: cDNAs: Em:DQ656024.2" FT CDS complement(join(<41712217..41712252,41712396..41712546, FT 41721636..41721706)) FT /gene="PGC" FT /locus_tag="RP11-298J23.1-004" FT /standard_name="OTTHUMP00000174679" FT /product="progastricsin (pepsinogen C)" FT /protein_id="CAM16152.1" FT /translation="MCLHPSSTPPFHQPRKEAVICKQRVPLKKFKSIRETMKEKGLLGE FT FLRTHKYDPAWKYRFGDLSVTYEPMAYMDAAYFGEISIGTP" FT mRNA complement(join(<41774609..41774749, FT AL160163.24:37137..37548)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-006" FT /product="ubiquitin specific peptidase 49" FT polyA_site complement(41737914) FT polyA_signal complement(41737931..41737936) FT CDS complement(join(41738357..41739271,41739554..41739702, FT 41740536..41740697,41743157..41743343,41744660..41744725)) FT /gene="FRS3" FT /locus_tag="RP11-298J23.2-001" FT /standard_name="OTTHUMP00000016383" FT /product="fibroblast growth factor receptor substrate 3" FT /note="match: proteins: Sw:O43559 Sw:Q91WJ0" FT /protein_id="CAI13183.1" FT /translation="MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSGVMELTQSEL FT VLHLHRREAVRWPYLCLRRYGYDSNLFSFESGRRCQTGQGIFAFKCSRAEEIFNLLQDL FT MQCNSINVMEEPVIITRNSHPAELDLPRAPQPPNALGYTVSSFSNGCPGEGPRFSAPRR FT LSTSSLRHPSLGEESTHALIAPDEQSHTYVNTPASEDDHRRGRHCLQPLPEGQAPFLPQ FT ARGPDQRDPQVFLQPGQVKFVLGPTPARRHMVKCQGLCPSLHDPPHHNNNNEAPSECPA FT QPKCTYENVTGGLWRGAGWRLSPEEPGWNGLAHRRAALLHYENLPPLPPVWESQAQQLG FT GEAGDDGDSRDGLTPSSNGFPDGEEDETPLQKPTSTRAAIRSHGSFPVPLTRRRGSPRV FT FNFDFRRPGPEPPRQLNYIQVELKGWGGDRPKGPQNPSSPQAPMPTTHPARSSDSYAVI FT DLKKTVAMSNLQRALPRDDGTARKTRHNSTDLPL" FT CDS complement(join(<41743301..41743343,41744660..41744725)) FT /gene="FRS3" FT /locus_tag="RP11-298J23.2-005" FT /standard_name="OTTHUMP00000196416" FT /product="fibroblast growth factor receptor substrate 3" FT /protein_id="CAO72056.1" FT /translation="MGSCCSCLNRDSVPDNHPTKFKVTNVDDEGVELGSG" FT mRNA complement(join(41744157..41744360,41744660..41744748, FT 41745223..41745565,41745771..41745914)) FT /gene="FRS3" FT /locus_tag="RP11-298J23.2-003" FT /product="fibroblast growth factor receptor substrate 3" FT /note="match: ESTs: Em:BI562215" FT misc_feature 41747474..41747873 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA complement(join(41737914..41739271,41739554..41739702, FT 41740536..41740697,41743157..41743343,41744660..41744748, FT 41745771..41745914,41747554..41747638)) FT /gene="FRS3" FT /locus_tag="RP11-298J23.2-001" FT /product="fibroblast growth factor receptor substrate 3" FT /note="match: ESTs: Em:BG708470 Em:BI520005 Em:BI668375 FT Em:BI757794" FT /note="match: cDNAs: Em:AF036718.1 Em:BC010611.1 FT Em:CR598942.1" FT mRNA join(41748087..41748564,41749088..41749258, FT 41751200..41751343,41751472..41751976,41752673..41752810, FT 41753075..41753278,41753866..41754070,41754178..41755563, FT 41756970..41757074,41757269..41757879) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-003" FT /product="chromosome 6 open reading frame 49" FT /note="match: ESTs: Em:BU182495.1 Em:BU521518.1 FT Em:CD557285.1 Em:CD723210.1" FT /note="match: cDNAs: Em:AL137721.1" FT mRNA complement(join(<41740582..41740697,41743157..41743343, FT 41744660..41744748,41748123..41748204)) FT /gene="FRS3" FT /locus_tag="RP11-298J23.2-004" FT /product="fibroblast growth factor receptor substrate 3" FT /note="match: ESTs: Em:BX098956.1" FT CDS complement(join(<41740582..41740697,41743157..41743343, FT 41744660..41744748,41748123..41748171)) FT /gene="FRS3" FT /locus_tag="RP11-298J23.2-004" FT /standard_name="OTTHUMP00000043537" FT /product="fibroblast growth factor receptor substrate 3" FT /protein_id="CAI13184.2" FT /translation="METPRRARSPVSPQFPGQAGCSDTMGSCCSCLNRDSVPDNHPTKF FT KVTNVDDEGVELGSGVMELTQSELVLHLHRREAVRWPYLCLRRYGYDSNLFSFESGRRC FT QTGQGIFAFKCSRAEEIFNLLQDLMQCNSINVMEEPVIITRNS" FT mRNA join(41748510..41748564,41749088..41749258, FT 41751200..41751976,41752673..41752810,41753075..41753278, FT 41753866..41754070,41754500..41755563,41756970..41757074, FT 41757306..41757629) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-004" FT /product="chromosome 6 open reading frame 49" FT /note="match: ESTs: Em:BI833664.1 Em:BX486665.1" FT /note="match: cDNAs: Em:BC027896.1" FT mRNA join(41748684..41749258,41751200..41751343, FT 41751869..41751976,41752673..41752810,41753075..41753278, FT 41753866..41754070,41754500..41755563,41756970..41757074, FT 41757306..41757633) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-001" FT /product="chromosome 6 open reading frame 49" FT /note="match: ESTs: Em:BE737475.1 Em:R56298.1" FT /note="match: cDNAs: Em:AK057184.1" FT mRNA complement(join(41764236..41764461,41766613..41766667, FT 41767568..41767676,41771544..41771748,41773366..41774749, FT AL160163.24:37137..37210,AL160163.24:38506..38585, FT AL160163.24:39656..39812,AL160163.24:52020..52119, FT AL160163.24:52847..52902)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-002" FT /product="ubiquitin specific peptidase 49" FT /note="match: cDNAs: Em:AB071094.1 Em:AK082872.1" FT mRNA join(41751212..41751343,41751869..41751976, FT 41752673..41752810,41753075..41753278,41753866..41754070, FT 41754500..41754867) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-006" FT /product="chromosome 6 open reading frame 49" FT CDS join(41751212..41751343,41751869..41751976, FT 41752673..41752810,41753075..41753278,41753866..41754070, FT 41754500..41754867) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-006" FT /standard_name="OTTHUMP00000174832" FT /product="chromosome 6 open reading frame 49" FT /note="match: proteins: Tr:Q2TBC5.1" FT /protein_id="CAI13185.1" FT /translation="MSVQNSGWPHQEDSPKPQDPGPPANSDSDSGHLPGEDPEDTHAQG FT PAVLSLGSLCLDTNQAPNWTGLQTLLQQLPPQDIDERYCLALGEEERAELQLFCARRKQ FT EALGQGVARLVLPKLEGHTCEKCRELLKPGEYGVFAARAGEQRCWHQPCFACQACGQAL FT INLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTEAEGQRWHENHFCCQDCAGP FT LGGGRYALPGGSPCCPSCFENRYSDAGSSWAGALEGQAFLGETGLDRTEGRDQTSVNSA FT TLSRTLLAAAGGSSLQTQRGLPGSSPQQENRPGDKAEAPKGQEQCRLETIRDPKDTPFS FT TCSSSSDSEPEGFFLGERLPQSWKTPGSLQAEDSNASKTHCTMC" FT mRNA join(41751857..41751976,41752673..41752810, FT 41753075..41753278,41753866..41754070,41754178..41754449) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-008" FT /product="chromosome 6 open reading frame 49" FT CDS join(41751857..41751976,41752673..41752810, FT 41753075..41753278,41753866..41754070,41754178..41754449) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-008" FT /standard_name="OTTHUMP00000196420" FT /product="chromosome 6 open reading frame 49" FT /note="match: proteins: Sw:Q2TBC4-2.2" FT /protein_id="CAO72057.1" FT /translation="MSPQGPAVLSLGSLCLDTNQAPNWTGLQTLLQQLPPQDIDERYCL FT ALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKPGEYGVFAARAG FT EQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTE FT AEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSDAGSSWAGALEGQAFL FT GAPPPHPPDPSLGARSSHRASLAGAFQGPPEPTPRRGRGCGARLPPRRGRRTPSGGGGG FT PWRGLSAAAAARTAQGLGGAGGWASPPLAAV" FT mRNA join(41751857..41751976,41752673..41752810, FT 41753075..41753278,41753866..41754070,41754500..41754867) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-007" FT /product="chromosome 6 open reading frame 49" FT CDS join(41751857..41751976,41752673..41752810, FT 41753075..41753278,41753866..41754070,41754500..41754867) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-007" FT /standard_name="OTTHUMP00000190846" FT /product="chromosome 6 open reading frame 49" FT /note="match: proteins: Sw:Q2TBC4.2" FT /protein_id="CAM16153.1" FT /translation="MSPQGPAVLSLGSLCLDTNQAPNWTGLQTLLQQLPPQDIDERYCL FT ALGEEERAELQLFCARRKQEALGQGVARLVLPKLEGHTCEKCRELLKPGEYGVFAARAG FT EQRCWHQPCFACQACGQALINLIYFYHDGQLYCGRHHAELLRPRCPACDQLIFSWRCTE FT AEGQRWHENHFCCQDCAGPLGGGRYALPGGSPCCPSCFENRYSDAGSSWAGALEGQAFL FT GETGLDRTEGRDQTSVNSATLSRTLLAAAGGSSLQTQRGLPGSSPQQENRPGDKAEAPK FT GQEQCRLETIRDPKDTPFSTCSSSSDSEPEGFFLGERLPQSWKTPGSLQAEDSNASKTH FT CTMC" FT mRNA join(41752530..41752810,41753075..41753159) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-002" FT /product="chromosome 6 open reading frame 49" FT /note="match: ESTs: Em:BM784491" FT mRNA join(41752744..41752810,41753075..41753278, FT 41753866..41754474) FT /gene="C6orf49" FT /locus_tag="RP11-298J23.3-005" FT /product="chromosome 6 open reading frame 49" FT /note="match: ESTs: Em:BU521518.1" FT mRNA complement(join(<41743301..41743343,41744660..41744748, FT 41745771..41745914,41754231..41754280)) FT /gene="FRS3" FT /locus_tag="RP11-298J23.2-005" FT /product="fibroblast growth factor receptor substrate 3" FT /note="match: ESTs: Em:BB870793.1" FT mRNA join(41755400..41755563,41756970..41757074, FT 41757269..41757636) FT /gene="TOMM6" FT /locus_tag="RP11-298J23.7-001" FT /product="translocase of outer mitochondrial membrane 6 FT homolog (yeast)" FT /note="match: ESTs: Em:BI754231.1 Em:BU182495.1 FT Em:BU199295.1 Em:CD242052.1 Em:CN300800.1 Em:DN995706.1" FT /note="match: cDNAs: Em:BC015975.1 Em:L34839.1" FT mRNA join(41755403..41755563,41756970..41757074, FT 41757306..41757634) FT /gene="TOMM6" FT /locus_tag="RP11-298J23.7-002" FT /product="translocase of outer mitochondrial membrane 6 FT homolog (yeast)" FT /note="match: ESTs: Em:BG611202.1" FT /note="match: cDNAs: Em:BC018624.1 Em:BC022274.1 FT Em:BC067252.1 Em:BC107435.1 Em:CR595842.1" FT CDS join(41755436..41755563,41756970..41757066) FT /gene="TOMM6" FT /locus_tag="RP11-298J23.7-001" FT /standard_name="OTTHUMP00000174797" FT /product="translocase of outer mitochondrial membrane 6 FT homolog (yeast)" FT /note="match: proteins: Sw:Q96B49.1" FT /protein_id="CAM16154.1" FT /translation="MASSTVPVSAAGSANETPEIPDNVGDWLRGVYRFATDRNDFRRNL FT ILNLGLFAAGVWLARNLSDIDLMAPQPGV" FT mRNA complement(join(41762107..41764461,41766462..41766667, FT 41767568..41767676,41771544..41771748,41773366..41774749, FT AL160163.24:37137..37210,AL160163.24:59506..59733)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-007" FT /product="ubiquitin specific peptidase 49" FT /note="match: cDNAs: Em:AB070143.1 Em:AJ586139.1 FT Em:BC060712.1" FT /note="match: ESTs: Em:AI243493.1 Em:BI792806.1 FT Em:BU631853.1 Em:CF264895.1" FT mRNA complement(join(<41774677..41774749, FT AL160163.24:37137..37210,AL160163.24:57367..57448, FT AL160163.24:59506..60028)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-005" FT /product="ubiquitin specific peptidase 49" FT /note="match: ESTs: Em:CN257830.1" FT polyA_signal 41757611..41757616 FT polyA_signal 41757628..41757629 FT polyA_site 41757633 FT polyA_site complement(41757634) FT polyA_signal complement(41757639..41757644) FT polyA_signal complement(41757647..41757652) FT mRNA complement(join(41765383..41766667,41767568..41767676, FT 41771544..41771748,41773366..41774749, FT AL160163.24:37137..37210,AL160163.24:57367..57448, FT AL160163.24:60897..>60934)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-001" FT /product="ubiquitin specific peptidase 49" FT /note="match: cDNAs: Em:BC014176.1" FT polyA_site complement(41762107) FT polyA_signal complement(41762121..41762126) FT polyA_site complement(41762554) FT polyA_signal complement(41762568..41762573) FT mRNA complement(join(41763707..41763894,41764264..41764356)) FT /locus_tag="RP11-298J23.6-001" FT /product="putative novel transcript" FT polyA_site complement(41765383) FT polyA_signal complement(41765397..41765402) FT CDS complement(join(41764429..41764461,41766613..41766667, FT 41767568..41767676,41771544..41771748,41773366..41774721)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-002" FT /standard_name="OTTHUMP00000016387" FT /product="ubiquitin specific peptidase 49" FT /note="match: proteins: Tr:Q95LU8" FT /protein_id="CAI13186.1" FT /translation="MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVA FT CGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRG FT QKQDTPVRRGRTLRSMASGEDVVLPQRAPQGQPQMLTALWYRRQRLLARTLRLWFEKSS FT RGQAKLEQRRQEEALERKKEEARRRRREVKRRLLEELASTPPRKSARLLLHTPRDAGPA FT ASRPAALPTSRRVPAATLKLRRQPAMAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECF FT LNLDPSKTEHLFPKATNGKTQLSGKPTNSSATELSLRNDRAEACEREGFCWNGRASISR FT SLELIQNKEPSSKHISLCRELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQD FT AQEFLCELLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISC FT NYKSNTIEPFWDLSLEFPERYHCIEKGFVPLNQTECLLTEMLAKFTETEALEGRIYACD FT QCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQV FT FGSTAMTQS" FT mRNA complement(join(41764415..41764461,41766462..41766667, FT 41767568..41767676,41773366..>41773483)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-004" FT /product="ubiquitin specific peptidase 49" FT /note="match: ESTs: Em:DN992189.1" FT CDS complement(join(41764271..41764461,41766462..41766667, FT 41767568..41767676,41771544..41771748,41773366..41774721)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-007" FT /standard_name="OTTHUMP00000196413" FT /product="ubiquitin specific peptidase 49" FT /note="match: proteins: Tr:Q95JN8.1" FT /protein_id="CAI13187.1" FT /translation="MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVA FT CGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRG FT QKQDTPVRRGRTLRSMASGEDVVLPQRAPQGQPQMLTALWYRRQRLLARTLRLWFEKSS FT RGQAKLEQRRQEEALERKKEEARRRRREVKRRLLEELASTPPRKSARLLLHTPRDAGPA FT ASRPAALPTSRRVPAATLKLRRQPAMAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECF FT LNLDPSKTEHLFPKATNGKTQLSGKPTNSSATELSLRNDRAEACEREGFCWNGRASISR FT SLELIQNKEPSSKHISLCRELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQD FT AQEFLCELLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISC FT NYKSNTIEPFWDLSLEFPERYHCIEKGFVPLNQTECLLTEMLAKFTETEALEGRIYACD FT QCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQV FT LTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSK FT LNVCSVEEVCKTQAYILFYTQRTVQGNARISETHLQAQVQSSNNDEGRPQTFS" FT CDS complement(join(41766415..41766667,41767568..41767676, FT 41771544..41771748,41773366..41774721)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-001" FT /standard_name="OTTHUMP00000016386" FT /product="ubiquitin specific peptidase 49" FT /note="match: proteins: Sw:Q70CQ1" FT /protein_id="CAI13188.1" FT /translation="MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVA FT CGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRG FT QKQDTPVRRGRTLRSMASGEDVVLPQRAPQGQPQMLTALWYRRQRLLARTLRLWFEKSS FT RGQAKLEQRRQEEALERKKEEARRRRREVKRRLLEELASTPPRKSARLLLHTPRDAGPA FT ASRPAALPTSRRVPAATLKLRRQPAMAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECF FT LNLDPSKTEHLFPKATNGKTQLSGKPTNSSATELSLRNDRAEACEREGFCWNGRASISR FT SLELIQNKEPSSKHISLCRELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQD FT AQEFLCELLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISC FT NYKSNTIEPFWDLSLEFPERYHCIEKGFVPLNQTECLLTEMLAKFTETEALEGRIYACD FT QCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQV FT LTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGACALLCGVG FT DTERG" FT CDS complement(<41774609..41774721) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-006" FT /standard_name="OTTHUMP00000196412" FT /product="ubiquitin specific peptidase 49" FT /protein_id="CAO72058.1" FT /translation="MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESVWA" FT CDS complement(<41774677..41774721) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-005" FT /standard_name="OTTHUMP00000196102" FT /product="ubiquitin specific peptidase 49" FT /protein_id="CAO72059.1" FT /translation="MDRCKHVGRLRLAQD" FT misc_feature 41802166 FT /note="Clone_left_end: RP5-973N23" FT misc_feature 41804166..41918671 FT /note="annotated region of clone" FT mRNA join(41836360..41836644,41837352..41837469) FT /locus_tag="RP5-973N23.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF001495.1" FT misc_feature 41836427..41836446 FT /note="Sequence from overlapping clone bA298J23 (AL365205). FT Assembly confirmed by restriction digest" FT mRNA complement(join(AL365205.35:<77155..77295, FT 41839302..41839713)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-006" FT /product="ubiquitin specific peptidase 49" FT misc_feature 41849567 FT /note="Clone_right_end: RP11-298J23" FT mRNA complement(join(AL365205.35:66782..67007, FT AL365205.35:69159..69213,AL365205.35:70114..70222, FT AL365205.35:74090..74294,AL365205.35:75912..77295, FT 41839302..41839375,41840671..41840750,41841821..41841977, FT 41854185..41854284,41855012..41855067)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-002" FT /product="ubiquitin specific peptidase 49" FT /note="match: cDNAs: Em:AB071094.1 Em:AK082872.1" FT mRNA complement(join(AL365205.35:64653..67007, FT AL365205.35:69008..69213,AL365205.35:70114..70222, FT AL365205.35:74090..74294,AL365205.35:75912..77295, FT 41839302..41839375,41861671..41861898)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-007" FT /product="ubiquitin specific peptidase 49" FT /note="match: cDNAs: Em:AB070143.1 Em:AJ586139.1 FT Em:BC060712.1" FT /note="match: ESTs: Em:AI243493.1 Em:BI792806.1 FT Em:BU631853.1 Em:CF264895.1" FT mRNA complement(join(AL365205.35:<77223..77295, FT 41839302..41839375,41859532..41859613,41861671..41862193)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-005" FT /product="ubiquitin specific peptidase 49" FT /note="match: ESTs: Em:CN257830.1" FT mRNA complement(join(AL365205.35:67929..69213, FT AL365205.35:70114..70222,AL365205.35:74090..74294, FT AL365205.35:75912..77295,41839302..41839375, FT 41859532..41859613,41863062..>41863099)) FT /gene="USP49" FT /locus_tag="RP11-298J23.4-001" FT /product="ubiquitin specific peptidase 49" FT /note="match: cDNAs: Em:BC014176.1" FT polyA_site complement(41873092) FT polyA_signal complement(41873106..41873111) FT misc_feature 41876926..41876986 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT CDS complement(join(<41875005..41875025,41877007..41877260, FT 41884523..41884667)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-004" FT /standard_name="OTTHUMP00000196106" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /protein_id="CAO72118.1" FT /translation="MPVAEGKSVQQTVELLTRKLEMLGAEKQGTFCVDCETYHTAASTL FT GSQGQTGKLMYVMHNSEYPLSCFALFENGPCLIADTNFDVLMVKLKGFFQSAKASKIET FT RGTRYQYCDFLVKVGTVTMGPSARGISVEVEYGPCV" FT mRNA complement(join(<41875005..41875025,41877007..41877260, FT 41884523..41884677,41885252..41885352)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-004" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT CDS complement(join(<41884594..41884677,41885533..41885630)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-005" FT /standard_name="OTTHUMP00000205787" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /protein_id="CAX13070.1" FT /translation="MMEMFSNNSVQYTSPSHLWLWATVLNSSSSQSCVSQMPVAEGKSV FT QQTVELLTRKLEMLGA" FT misc_feature 41887871 FT /note="Clone_left_end: RP11-533O20" FT mRNA complement(join(41873093..41875025,41877007..41877260, FT 41880723..41880838,41884523..41884677,41888538..41888681)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-002" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /note="match: cDNAs: Em:AK097385.1" FT mRNA complement(join(41873092..41875025,41877007..41877260, FT 41884523..41884677,41888743..41888837)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-001" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /note="match: ESTs: Em:AU130594 Em:BI916169 Em:BM007612 FT Em:BM476769" FT /note="match: cDNAs: Em:AF097725.1 Em:AK023092.1 FT Em:AL050196.1 Em:BC015189.1" FT CDS complement(join(41874810..41875025,41877007..41877260, FT 41884523..41884677,41888743..41888756)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-001" FT /standard_name="OTTHUMP00000016389" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /note="match: proteins: Sw:Q9H944" FT /protein_id="CAI23487.1" FT /translation="MGVTCVSQMPVAEGKSVQQTVELLTRKLEMLGAEKQGTFCVDCET FT YHTAASTLGSQGQTGKLMYVMHNSEYPLSCFALFENGPCLIADTNFDVLMVKLKGFFQS FT AKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVEYGPCVVASDCWSLLLEFLQS FT FLGSHTPGAPAVFGNRHDAVYGPADTMVQYMELFNKIRKQQQVPVAGIR" FT mRNA complement(join(41873934..41875025,41877007..41877260, FT 41888743..41888877)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-006" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /note="match: cDNAs: Em:AK300573.1" FT mRNA complement(join(41874542..41875025,41877083..41877260, FT 41884523..41884677,41888743..41888857)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-007" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /note="match: cDNAs: Em:AK293412.1" FT CDS complement(join(41875001..41875025,41877083..41877260, FT 41884523..41884677,41888743..41888756)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-007" FT /standard_name="OTTHUMP00000205788" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /protein_id="CAX13071.1" FT /translation="MGVTCVSQMPVAEGKSVQQTVELLTRKLEMLGAEKQGTFCVDCET FT YHTAASTLGSQGQTGKLMYVMHNSEYPLSCFALFENGPCLIADTNFDVLMVKLKGFFQS FT AKASKIETRGTRWSMAPVW" FT mRNA complement(join(41876690..41877260,41884523..41884677, FT 41888743..41888831)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-003" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /note="match: ESTs: Em:BX366933.2" FT CDS complement(join(41876992..41877260,41884523..41884677, FT 41888743..41888756)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-003" FT /standard_name="OTTHUMP00000205789" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /protein_id="CAX13072.1" FT /translation="MGVTCVSQMPVAEGKSVQQTVELLTRKLEMLGAEKQGTFCVDCET FT YHTAASTLGSQGQTGKLMYVMHNSEYPLSCFALFENGPCLIADTNFDVLMVKLKGFFQS FT AKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVRPW" FT mRNA complement(join(<41884594..41884677,41885533..41885654, FT 41888743..41888843)) FT /gene="TRFP" FT /locus_tag="RP5-973N23.1-005" FT /product="mediator complex subunit 20mediator complex FT subunit 20mediator complex subunit 20Trf (TATA binding FT protein-related factor)-proximal homolog (Drosophila)" FT /note="match: ESTs: Em:CB120606.1" FT mRNA join(<41889229..41889568,41895112..41895274, FT 41897870..41898008,41898373..41898506,41899134..41899294, FT 41899466..41899568,41900099..41900784) FT /gene="BYSL" FT /locus_tag="RP5-973N23.2-001" FT /product="bystin-like" FT /note="match: cDNAs: Em:BC007340.1 Em:BC017530.1" FT /note="match: ESTs: Em:AL559948 Em:BE798667 Em:BE873442 FT Em:BG674494 Em:BG999167" FT CDS join(41897892..41898008,41898373..41898506, FT 41899134..41899294,41899466..41899568,41900099..41900444) FT /gene="BYSL" FT /locus_tag="RP5-973N23.2-001" FT /standard_name="OTTHUMP00000016385" FT /product="bystin-like" FT /note="match: proteins: Sw:O54825 Sw:Q13895" FT /protein_id="CAI23489.1" FT /translation="MEKLTEKQTEVETVMSEVSGFPMPQLDPRVLEVYRGVREVLSKYR FT SGKLPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASNLKERMAQRFYNLVLL FT PRVRDDVAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTCTLREAIIVGSIITK FT CSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDALVFHFLGFRTEKRE FT LPVLWHQCLLTLVQRYKADLATDQKEALLELLRLQPHPQLSPEIRRELQSAVPRDVEDV FT PITVE" FT polyA_signal 41900756..41900761 FT polyA_site 41900784 FT polyA_site complement(41902672) FT polyA_signal complement(41902696..41902708) FT mRNA complement(join(41902694..41903845,41904297..41904433, FT 41904973..41905132,41908108..41908323,41908690..>41909144)) FT /gene="CCND3" FT /locus_tag="RP5-973N23.3-002" FT /product="cyclin D3" FT /note="match: cDNAs: Em:AK055519.1" FT CDS complement(join(41903678..41903845,41904297..41904433, FT 41904973..41905132,41908108..41908323,41908690..41908737)) FT /gene="CCND3" FT /locus_tag="RP5-973N23.3-002" FT /standard_name="OTTHUMP00000016391" FT /product="cyclin D3" FT /protein_id="CAI23490.1" FT /translation="MKSAGGSGRSLLPSPRVCEEQRCEEEVFPLAMNYLDRYLSCVPTR FT KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAA FT VIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQ FT GLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRG FT SSSQGPSQTSTPTDVTAIHL" FT mRNA complement(join(41902671..41903845,41904297..41904433, FT 41904973..41905132,41908108..41908323,41909190..>41909552)) FT /gene="CCND3" FT /locus_tag="RP5-973N23.3-001" FT /product="cyclin D3" FT /note="match: cDNAs: Em:BC011616.1 Em:M92287.1" FT CDS complement(join(41903678..41903845,41904297..41904433, FT 41904973..41905132,41908108..41908323,41909190..41909387)) FT /gene="CCND3" FT /locus_tag="RP5-973N23.3-001" FT /standard_name="OTTHUMP00000016390" FT /product="cyclin D3" FT /note="match: proteins: Sw:P30281 Sw:P30282" FT /protein_id="CAI23491.1" FT /translation="MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYF FT QCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGA FT VCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAF FT ILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSG FT DELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQT FT STPTDVTAIHL" FT misc_feature 41916671 FT /note="Clone_right_end: RP5-973N23" FT misc_feature 41918672..42023650 FT /note="annotated region of clone" FT misc_feature 41949593 FT /note="Weak data" FT mRNA join(41997791..41997814,41998984..41999120) FT /locus_tag="RP11-533O20.2-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:W04248" FT mRNA join(42018260..42018324,42019095..42019251, FT 42023269..42023367,AL512274.9:140..202, FT AL512274.9:1577..1701,AL512274.9:10500..10647, FT AL512274.9:12653..12795,AL512274.9:21288..21427, FT AL512274.9:30907..31649) FT /locus_tag="RP11-7K24.1-001" FT /product="novel protein similar to prodos protein" FT /note="match: ESTs: Em:AA671718" FT /note="match: cDNAs: Em:AK057383" FT mRNA join(42018275..42018324,42019095..42019251, FT 42023269..42023367,AL512274.9:140..202, FT AL512274.9:1577..1977) FT /locus_tag="RP11-7K24.1-002" FT /product="novel protein similar to prodos protein" FT /note="match: cDNAs: Em:BC018796" FT CDS join(42018280..42018324,42019095..42019251, FT 42023269..42023367,AL512274.9:140..202, FT AL512274.9:1577..1737) FT /locus_tag="RP11-7K24.1-002" FT /standard_name="OTTHUMP00000016393" FT /product="novel protein similar to prodos protein" FT /protein_id="CAI15202.1" FT /translation="MADAAATAGAGGSGTRSGSKQSTNPADNYHLARRRTLQVVVSSLL FT TEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNV FT DTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTP FT VSDEALGLRVV" FT CDS join(42018280..42018324,42019095..42019251, FT 42023269..42023367,AL512274.9:140..202, FT AL512274.9:1577..1701,AL512274.9:10500..10647, FT AL512274.9:12653..12795,AL512274.9:21288..21427, FT AL512274.9:30907..30922) FT /locus_tag="RP11-7K24.1-001" FT /standard_name="OTTHUMP00000016392" FT /product="novel protein similar to prodos protein" FT /note="match: proteins: Sw:Q9VWY6" FT /protein_id="CAI15203.1" FT /translation="MADAAATAGAGGSGTRSGSKQSTNPADNYHLARRRTLQVVVSSLL FT TEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNV FT DTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTP FT TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIP FT YLTALLPSELEMQQMEETDSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSG FT SRNGEENIIDNPYLRPVKKPKIRRKKPDTF" FT misc_feature 42023451 FT /note="Clone_left_end: RP11-7K24" FT misc_feature 42023651..42102869 FT /note="annotated region of clone" FT polyA_signal 42025500..42025505 FT polyA_site 42025527 FT misc_feature 42046509..42046693 FT /note="Sequence from overlapping clone RP11-533O20 FT (AL513008). Assembly confirmed by restriction digest" FT polyA_signal 42055181..42055186 FT polyA_site 42055199 FT misc_feature 42056576..42056694 FT /note="Sequence from overlapping clone RP11-533O20 FT (AL513008). Assembly confirmed by restriction digest" FT misc_feature 42064144 FT /note="Clone_right_end: RP11-533O20" FT misc_feature 42072272..42072383 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 42074213..42074361 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 42074948..42075035 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 42094383..42094395 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 42100770 FT /note="Clone_left_end: RP1-139D8" FT mRNA join(AL513008.14:99689..99753,AL513008.14:100524..100680, FT AL513008.14:104698..104796,42023690..42023752, FT 42025127..42025251,42034050..42034197,42036203..42036345, FT 42044838..42044977,42054457..42055199) FT /locus_tag="RP11-7K24.1-001" FT /product="novel protein similar to prodos protein" FT /note="match: ESTs: Em:AA671718" FT /note="match: cDNAs: Em:AK057383" FT mRNA join(AL513008.14:99704..99753,AL513008.14:100524..100680, FT AL513008.14:104698..104796,42023690..42023752, FT 42025127..42025527) FT /locus_tag="RP11-7K24.1-002" FT /product="novel protein similar to prodos protein" FT /note="match: cDNAs: Em:BC018796" FT CDS join(AL513008.14:99709..99753,AL513008.14:100524..100680, FT AL513008.14:104698..104796,42023690..42023752, FT 42025127..42025287) FT /locus_tag="RP11-7K24.1-002" FT /standard_name="OTTHUMP00000016393" FT /product="novel protein similar to prodos protein" FT /protein_id="CAI16781.1" FT /translation="MADAAATAGAGGSGTRSGSKQSTNPADNYHLARRRTLQVVVSSLL FT TEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNV FT DTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTP FT VSDEALGLRVV" FT CDS join(AL513008.14:99709..99753,AL513008.14:100524..100680, FT AL513008.14:104698..104796,42023690..42023752, FT 42025127..42025251,42034050..42034197,42036203..42036345, FT 42044838..42044977,42054457..42054472) FT /locus_tag="RP11-7K24.1-001" FT /standard_name="OTTHUMP00000016392" FT /product="novel protein similar to prodos protein" FT /note="match: proteins: Sw:Q9VWY6" FT /protein_id="CAI16782.1" FT /translation="MADAAATAGAGGSGTRSGSKQSTNPADNYHLARRRTLQVVVSSLL FT TEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNV FT DTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTP FT TYREPVSDYQVLREKAASQRRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIP FT YLTALLPSELEMQQMEETDSSEQDEQTDTENLALHISMEDSGAEKENTSVLQQNPSLSG FT SRNGEENIIDNPYLRPVKKPKIRRKKPDTF" FT mRNA join(AL096814.26:157607..157915, FT complement(42096410..42096516), FT complement(42077954..42078029), FT complement(<42075147..42075321)) FT /locus_tag="RP11-7K24.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:BF117224" FT /note="match: cDNAs: Em:BC006605.1" FT CDS join(AL096814.26:157771..157915, FT complement(42096410..42096516), FT complement(42077954..42078029), FT complement(<42075147..42075321)) FT /locus_tag="RP11-7K24.2-001" FT /standard_name="OTTHUMP00000016396" FT /product="novel protein" FT /note="match: proteins: Tr:Q91Z58" FT /protein_id="CAI16783.1" FT /translation="MKKKQTVQGTFSKLFGKKHTTTPSTSLYATNPPWIFTQEAPEEGT FT GGFDGIYYGDNRFNTVSESGTATLKARPRVRPLLTFLPLNAQENHGLAVPTPSVPDDFA FT DKEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPL FT PSPPS" FT misc_feature complement(42102870..42267952) FT /note="annotated region of clone" FT misc_feature complement(42257731..42258042) FT /note="Single clone region. pUC subcloned to give 8x FT coverage" FT CDS complement(join(42196083..42196407,42200419..42200630, FT 42203943..42204149,42210986..42211099,42214194..42214282, FT 42222589..42222664,42224466..42224569,42224701..42224840, FT 42225873..42225939,42227077..42227461,42231058..42231306, FT 42232442..42232592,42233489..42233535,42235892..42237328)) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-001" FT /standard_name="OTTHUMP00000016399" FT /product="transcriptional regulating factor 1" FT /note="match: proteins: Sw:Q96PN7.1" FT /protein_id="CAD92526.1" FT /translation="MGDQQLYKTNHVAHGSENLFYQQPPLGVHSGLNHNYGNAVTGGGM FT DAPQASPISPHFPQDTRDGLGLPVGSKNLGQMDTSRQGGWGSHAGPGNHVQLRGNLANS FT NMMWGAPAQAEPTDGYQYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMA FT QVLHTQSAVMDGAPDSALRQLLSQKPMEPPAPAIPSRYQQVPQQPHPGFTGGLSKPALQ FT VGQHPTQGHLYYDYQQPLAQVPVQGGQPLQAPQMLSQHMQQMQQHQYYPPQQQQQAGQQ FT RISMQEIQTQPQQIRPSQPQPPPQQQQPQQLQLQQRQGSMQIPQYYQPQPMMQHLQEQQ FT QQQMHLQPPSYHRDPHQYTPEQAHTVQLIPLGSMSQYYYQEPQQPYSHPLYQQSHLSQH FT QQREDSQLKTYSSDRQAQAMLSSHGDLGPPDTGMGDPASSDLTRVSSTLPHRPLLSPSG FT IHLNNMGPQHQQLSPSAMWPQMHLPDGRAQPGSPESSGQPKGAFGEQFDAKNKLTCSIC FT LKEFKNLPALNGHMRSHGGMRASPNLKQEEGEKVLPPQPQPPLPPPPPPPPPPQLPPEA FT ESLTPMVMPVSVPVKLLPPKPSSQGFTNSTVAAPSARDKPASSMSDDEMPVLEIPRKHQ FT PSVPKAEEPLKTVQEKKKFRHRPEPLFIPPPPSYNPNPAASYSGATLYQSQLRSPRVLG FT DHLLLDPTHELPPYTPPPMLSPVRQGSGLFSNVLISGHGPGAHPQLPLTPLTPTPRVLL FT CRSNSIDGSNVTVTPGPGEQTVDVEPRINIGLRFQAEIPELQDISALAQDTHKATLVWK FT PWPELENHDLQQRVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMVALEMLLLRKP FT VRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYT FT WKKIMRLGRKHRTRLAEIIDDCVTSEEEEELEEEEEEDPEEDRKSTKEEESEVPKSPEP FT PPVPVLAPTEGPPLQALGQPSGSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKARG FT AIPSGKQKPGGTQSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKT FT HRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPGLLPLDQLSLIKPIKDVDILDDDV FT VQQLGGVMEEAEVVDTDLLLDDQDSVLLQGDAEL" FT CDS complement(join(42196083..42196407,42200419..42200666, FT 42203943..42204149,42210986..42211099,42214194..42214282, FT 42222589..42222664,42224466..42224569,42224701..42224840, FT 42225873..42225939,42227077..42227461,42232442..42232592, FT 42233489..42233535,42235892..42237328)) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-002" FT /standard_name="OTTHUMP00000016400" FT /product="transcriptional regulating factor 1" FT /protein_id="CAD92527.2" FT /translation="MGDQQLYKTNHVAHGSENLFYQQPPLGVHSGLNHNYGNAVTGGGM FT DAPQASPISPHFPQDTRDGLGLPVGSKNLGQMDTSRQGGWGSHAGPGNHVQLRGNLANS FT NMMWGAPAQAEPTDGYQYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMA FT QVLHTQSAVMDGAPDSALRQLLSQKPMEPPAPAIPSRYQQVPQQPHPGFTGGLSKPALQ FT VGQHPTQGHLYYDYQQPLAQVPVQGGQPLQAPQMLSQHMQQMQQHQYYPPQQQQQAGQQ FT RISMQEIQTQPQQIRPSQPQPPPQQQQPQQLQLQQRQGSMQIPQYYQPQPMMQHLQEQQ FT QQQMHLQPPSYHRDPHQYTPEQAHTVQLIPLGSMSQYYYQEPQQPYSHPLYQQSHLSQH FT QQREDSQLKTYSSDRQAQAMLSSHGDLGPPDTGMGDPASSDLTRVSSTLPHRPLLSPSG FT IHLNNMGPQHQQLSPSAMWPQMHLPDGRAQPGSPESSGQPKGAFGEQFDAKNKLTCSIC FT LKEFKNLPALNGHMRSHGGMRASPNLKQEIPRKHQPSVPKAEEPLKTVQEKKKFRHRPE FT PLFIPPPPSYNPNPAASYSGATLYQSQLRSPRVLGDHLLLDPTHELPPYTPPPMLSPVR FT QGSGLFSNVLISGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNVTVTPGPGEQTVDV FT EPRINIGLRFQAEIPELQDISALAQDTHKATLVWKPWPELENHDLQQRVENLLNLCCSS FT ALPGGGTNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLER FT KLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAEIIDDCVT FT SEEEEELEEEEEEDPEEDRKSTKEEESEVPKSPEPPPVPVLAPTEGPPLQALGQPSGSF FT ICEMPNCGADCRCHVTPFLPQVFSSRQALNGHARIHGGTNQVTKARGAIPSGKQKPGGT FT QSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKA FT QKAAFAAEMAATIERTTGPVGAPGLLPLDQLSLIKPIKDVDILDDDVVQQLGGVMEEAE FT VVDTDLLLDDQDSVLLQGDAEL" FT CDS complement(join(42196083..42196407,42200419..42200630, FT 42203943..42204149,42210986..42211099,42214194..42214282, FT 42222589..42222664,42224466..42224569,42224701..42224840, FT 42225873..42225939,42227077..42227461,42232442..42232592, FT 42233489..42233535,42235892..42237328)) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-003" FT /standard_name="OTTHUMP00000016401" FT /product="transcriptional regulating factor 1" FT /protein_id="CAD92528.2" FT /translation="MGDQQLYKTNHVAHGSENLFYQQPPLGVHSGLNHNYGNAVTGGGM FT DAPQASPISPHFPQDTRDGLGLPVGSKNLGQMDTSRQGGWGSHAGPGNHVQLRGNLANS FT NMMWGAPAQAEPTDGYQYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMA FT QVLHTQSAVMDGAPDSALRQLLSQKPMEPPAPAIPSRYQQVPQQPHPGFTGGLSKPALQ FT VGQHPTQGHLYYDYQQPLAQVPVQGGQPLQAPQMLSQHMQQMQQHQYYPPQQQQQAGQQ FT RISMQEIQTQPQQIRPSQPQPPPQQQQPQQLQLQQRQGSMQIPQYYQPQPMMQHLQEQQ FT QQQMHLQPPSYHRDPHQYTPEQAHTVQLIPLGSMSQYYYQEPQQPYSHPLYQQSHLSQH FT QQREDSQLKTYSSDRQAQAMLSSHGDLGPPDTGMGDPASSDLTRVSSTLPHRPLLSPSG FT IHLNNMGPQHQQLSPSAMWPQMHLPDGRAQPGSPESSGQPKGAFGEQFDAKNKLTCSIC FT LKEFKNLPALNGHMRSHGGMRASPNLKQEIPRKHQPSVPKAEEPLKTVQEKKKFRHRPE FT PLFIPPPPSYNPNPAASYSGATLYQSQLRSPRVLGDHLLLDPTHELPPYTPPPMLSPVR FT QGSGLFSNVLISGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNVTVTPGPGEQTVDV FT EPRINIGLRFQAEIPELQDISALAQDTHKATLVWKPWPELENHDLQQRVENLLNLCCSS FT ALPGGGTNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLER FT KLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAEIIDDCVT FT SEEEEELEEEEEEDPEEDRKSTKEEESEVPKSPEPPPVPVLAPTEGPPLQALGQPSGSF FT ICEMPNCGAVFSSRQALNGHARIHGGTNQVTKARGAIPSGKQKPGGTQSGYCSVKSSPS FT HSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAAT FT IERTTGPVGAPGLLPLDQLSLIKPIKDVDILDDDVVQQLGGVMEEAEVVDTDLLLDDQD FT SVLLQGDAEL" FT mRNA complement(join(42195887..42196407,42200419..42200666, FT 42203943..42204149,42210986..42211099,42214194..42214282, FT 42222589..42222664,42224466..42224569,42224701..42224840, FT 42225873..42225939,42227077..42227461,42232442..42232592, FT 42233489..42233535,42235892..42237586,AL138735.7:524..635, FT AL138735.7:62833..62965,AL450325.5:67606..67690)) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-002" FT /product="transcriptional regulating factor 1" FT /note="match: ESTs: Em:AW427177 Em:BF600417" FT /note="match: cDNAs: Em:AJ277276.1" FT mRNA complement(join(42195887..42196407,42200419..42200630, FT 42203943..42204149,42210986..42211099,42214194..42214282, FT 42222589..42222664,42224466..42224569,42224701..42224840, FT 42225873..42225939,42227077..42227461,42232442..42232592, FT 42233489..42233535,42235892..42237586,AL138735.7:524..635, FT AL138735.7:62833..62965,AL450325.5:67606..67690)) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-003" FT /product="transcriptional regulating factor 1" FT /note="match: cDNAs: Em:AJ277275.1" FT mRNA complement(join(42192963..42196407,42200419..42200630, FT 42203943..42204149,42210986..42211099,42214194..42214282, FT 42222589..42222664,42224466..42224569,42224701..42224840, FT 42225873..42225939,42227077..42227461,42231058..42231306, FT 42232442..42232592,42233489..42233535,42235892..42237586, FT AL138735.7:524..635,AL138735.7:62883..62965, FT AL450325.5:67606..67690,AL450325.5:68450..68474)) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-001" FT /product="transcriptional regulating factor 1" FT /note="match: ESTs: Em:AA460886 Em:AW117866 Em:BE668765 FT Em:BE671472 Em:BF377628 Em:BF600417 Em:BF724271 Em:BI093857 FT Em:BI255368 Em:BI826136 Em:BM054119 Em:H23193 Em:H23308" FT /note="match: cDNAs: Em:AF297872.1 Em:AK002096.1" FT polyA_signal complement(42193001..42193006) FT polyA_site complement(42192963) FT mRNA complement(join(42174539..42176110,42176596..42176685, FT 42178226..42178334,42179519..42179655,42181858..42181930, FT 42182018..42182082,42185540..42185603)) FT /gene="MRPS10" FT /locus_tag="RP1-139D8.7-001" FT /product="mitochondrial ribosomal protein S10" FT /note="match: ESTs: Em:AU128211 Em:AV649583 Em:AW023196 FT Em:BF035272 Em:BF669384" FT /note="match: cDNAs: Em:AF113220.1 Em:AK001429.1" FT CDS complement(join(42176027..42176110,42176596..42176685, FT 42178226..42178334,42179519..42179655,42181858..42181930, FT 42182018..42182082,42185540..42185587)) FT /gene="MRPS10" FT /locus_tag="RP1-139D8.7-001" FT /standard_name="OTTHUMP00000016395" FT /product="mitochondrial ribosomal protein S10" FT /note="match: proteins: Sw:P82664" FT /protein_id="CAD92529.1" FT /translation="MAARTAFGAVCRRLWQGLGNFSVNTSKGNTAKNGGLLLSTNMKWV FT QFSNLHVDVPKDLTKPVVTISDEPDILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGI FT SIKVHEPPRKIERFTLLQSVHIYKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRN FT LPEGVAMEVTKTQLEQLPEHIKEPIWETLSEEKEESKS" FT polyA_signal complement(42174570..42174575) FT polyA_site complement(42174539) FT mRNA complement(join(42152139..42152680,42153418..42153535, FT 42156320..42156469,42162352..42162654)) FT /gene="GUCA1B" FT /locus_tag="RP1-139D8.1-001" FT /product="guanylate cyclase activator 1B (retina)" FT /note="match: ESTs: Em:BG288455.1 Em:BG288475.1 FT Em:BG296960.1 Em:BI734340.1 Em:BI738123.1 Em:BI739637.1 FT Em:W26445.1 Em:W27135.1" FT /note="match: cDNAs: Em:AY050502.1 Em:BC018258.1 FT Em:BC018480.1 Em:BC029017.1 Em:BC029661.1 Em:L43001.1 FT Em:U32856.1" FT CDS complement(join(42152553..42152680,42153418..42153535, FT 42156320..42156469,42162352..42162558)) FT /gene="GUCA1B" FT /locus_tag="RP1-139D8.1-001" FT /standard_name="OTTHUMP00000016398" FT /product="guanylate cyclase activator 1B (retina)" FT /note="match: proteins: Sw:O73762 Sw:P51177 Sw:P79881 FT Sw:Q8VBV8 Sw:Q9UMX6 Tr:Q8UUY0 Tr:Q8UWA3 Tr:Q90WX3" FT /protein_id="CAB89166.1" FT /translation="MGQEFSWEEAEAAGEIDVAELQEWYKKFVMECPSGTLFMHEFKRF FT FKVTDDEEASQYVEGMFRAFDKNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKD FT GNGCIDRLELLNIVEGIYQLKKACRRELQTEQGQLLTPEEVVDRIFLLVDENGDGQLSL FT NEFVEGARRDKWVMKMLQMDMNPSSWLAQQRRKSAMF" FT misc_feature complement(42158460) FT /note="Clone_right_end: RP1-321B9" FT polyA_site 42147788 FT polyA_signal 42147775..42147780 FT CDS join(42141352..42141552,42146018..42146167, FT 42146540..42146633,42146981..42147141) FT /gene="GUCA1A" FT /locus_tag="RP1-139D8.2-003" FT /standard_name="OTTHUMP00000196468" FT /product="guanylate cyclase activator 1A (retina)" FT /protein_id="CAB89167.1" FT /translation="MGNVMEGKSVEELSSTECHQWYKKFMTECPSGQLTLYEFRQFFGL FT KNLSPSASQYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVEQKLRWYFKLYDVDGN FT GCIDRDELLTIIQAIRAINPCSDTTMTAEEFTDTVFSKIDVNGDGELSLEEFIEGVQKD FT QMLLDTLTRSLDLTRIVRRLQNGEQDEEGADEAAEAAG" FT mRNA join(42141029..42141552,42146018..42146167, FT 42146540..42146633,42146981..42147787) FT /gene="GUCA1A" FT /locus_tag="RP1-139D8.2-001" FT /product="guanylate cyclase activator 1A (retina)" FT /note="match: ESTs: Em:AI830719.1 Em:W23280 Em:W26227 FT Em:W26591 Em:W26647 Em:W27608 Em:W27659 Em:W27674 FT Em:W27824" FT /note="match: cDNAs: Em:AF047882 Em:l36859 Em:L36860 FT Em:S82199 Em:X95352" FT CDS join(42141352..42141552,42146018..>42146080) FT /gene="GUCA1A" FT /locus_tag="RP1-139D8.2-004" FT /standard_name="OTTHUMP00000196467" FT /product="guanylate cyclase activator 1A (retina)" FT /protein_id="CAO03542.1" FT /translation="MGNVMEGKSVEELSSTECHQWYKKFMTECPSGQLTLYEFRQFFGL FT KNLSPSASQYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKV" FT misc_feature complement(42140538..42140559) FT /note="Tandem repeat. Weak data" FT polyA_site 42131156 FT polyA_site 42131153 FT polyA_site 42131150 FT polyA_signal 42131127..42131132 FT mRNA join(42123174..42123331,42130658..42130833, FT 42141071..42141552,42146018..42146167,42146540..42146633, FT 42146981..42147794) FT /gene="GUCA1A" FT /locus_tag="RP1-139D8.2-003" FT /product="guanylate cyclase activator 1A (retina)" FT /note="match: cDNAs: Em:BC031663.1" FT mRNA join(42123184..42123331,42130658..42131204, FT 42141071..42141552,42146018..42146167,42146540..42146633, FT 42146981..42147792) FT /gene="GUCA1A" FT /locus_tag="RP1-139D8.2-002" FT /product="guanylate cyclase activator 1A (retina)" FT /note="match: cDNAs: Em:AK125780.1" FT mRNA join(42123279..42123331,42130658..42131156) FT /locus_tag="RP1-139D8.6-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA400498 Em:AA861265" FT /note="match: cDNAs: Em:BC111651.1" FT CDS join(42123317..42123331,42130658..42130987) FT /locus_tag="RP1-139D8.6-001" FT /standard_name="OTTHUMP00000016394" FT /product="novel protein" FT /note="match: proteins: Tr:Q2NKT6.1 Tr:Q4R7U6.1 Tr:Q8K168.1 FT Tr:Q9DAS0.1" FT /protein_id="CAD92530.1" FT /translation="MCGWEDSQKPSVPSHGPKTPSCKGVKAPHSSRPRAWKQDLEQSLA FT AAYVPVVVDSKGQNPDKLRFNFYTSQYSNSLNPFYTLQKPTCGYLYRRDTDHTRKRFDV FT PPANLVLWRS" FT mRNA join(42123144..42123223,42130658..42130833, FT 42141071..42141552,42146018..>42146080) FT /gene="GUCA1A" FT /locus_tag="RP1-139D8.2-004" FT /product="guanylate cyclase activator 1A (retina)" FT /note="match: cDNAs: Em:AB168716.1" FT /note="match: ESTs: Em:BI559379.1 Em:DB031911.1 FT Em:DB453370.1" FT mRNA complement(join(AL512274.9:<51597..51771, FT AL512274.9:54404..54479,AL512274.9:72860..72966, FT 42110038..42110346)) FT /locus_tag="RP11-7K24.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:BF117224" FT /note="match: cDNAs: Em:BC006605.1" FT CDS complement(join(AL512274.9:<51597..51771, FT AL512274.9:54404..54479,AL512274.9:72860..72966, FT 42110038..42110182)) FT /locus_tag="RP11-7K24.2-001" FT /standard_name="OTTHUMP00000016396" FT /product="novel protein" FT /note="match: proteins: Tr:Q91Z58" FT /protein_id="CAI19541.1" FT /translation="MKKKQTVQGTFSKLFGKKHTTTPSTSLYATNPPWIFTQEAPEEGT FT GGFDGIYYGDNRFNTVSESGTATLKARPRVRPLLTFLPLNAQENHGLAVPTPSVPDDFA FT DKEVTGTSSLVNGNLRLYSSVGDLRPGQYGQDLLIPPPPPGPAPGPPQDISEPPGGSPL FT PSPPS" FT misc_feature complement(42102870) FT /note="Clone_left_end: RP1-139D8" FT misc_feature 42267953..42351409 FT /note="annotated region of clone" FT mRNA join(complement(AL450325.5:67606..67690), FT complement(42330685..42330817), FT complement(42268376..42268487),AL096814.26:30367..32061, FT AL096814.26:34418..34464,AL096814.26:35361..35511, FT AL096814.26:40492..40876,AL096814.26:42014..42080, FT AL096814.26:43113..43252,AL096814.26:43384..43487, FT AL096814.26:45289..45364,AL096814.26:53671..53759, FT AL096814.26:56854..56967,AL096814.26:63804..64010, FT AL096814.26:67287..67534,AL096814.26:71546..72066) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-002" FT /product="transcriptional regulating factor 1" FT /note="match: ESTs: Em:AW427177 Em:BF600417" FT /note="match: cDNAs: Em:AJ277276.1" FT mRNA join(complement(AL450325.5:67606..67690), FT complement(42330685..42330817), FT complement(42268376..42268487),AL096814.26:30367..32061, FT AL096814.26:34418..34464,AL096814.26:35361..35511, FT AL096814.26:40492..40876,AL096814.26:42014..42080, FT AL096814.26:43113..43252,AL096814.26:43384..43487, FT AL096814.26:45289..45364,AL096814.26:53671..53759, FT AL096814.26:56854..56967,AL096814.26:63804..64010, FT AL096814.26:67323..67534,AL096814.26:71546..72066) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-003" FT /product="transcriptional regulating factor 1" FT /note="match: cDNAs: Em:AJ277275.1" FT mRNA join(complement(AL450325.5:68450..68474), FT complement(AL450325.5:67606..67690), FT complement(42330735..42330817), FT complement(42268376..42268487),AL096814.26:30367..32061, FT AL096814.26:34418..34464,AL096814.26:35361..35511, FT AL096814.26:36647..36895,AL096814.26:40492..40876, FT AL096814.26:42014..42080,AL096814.26:43113..43252, FT AL096814.26:43384..43487,AL096814.26:45289..45364, FT AL096814.26:53671..53759,AL096814.26:56854..56967, FT AL096814.26:63804..64010,AL096814.26:67323..67534, FT AL096814.26:71546..74990) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-001" FT /product="transcriptional regulating factor 1" FT /note="match: ESTs: Em:AA460886 Em:AW117866 Em:BE668765 FT Em:BE671472 Em:BF377628 Em:BF600417 Em:BF724271 Em:BI093857 FT Em:BI255368 Em:BI826136 Em:BM054119 Em:H23193 Em:H23308" FT /note="match: cDNAs: Em:AF297872.1 Em:AK002096.1" FT misc_feature 42351309 FT /note="Clone_right_end: RP1-321B9" FT misc_feature 42351410..42439428 FT /note="annotated region of clone" FT mRNA join(complement(42418915..42418999), FT complement(AL138735.7:62833..62965), FT complement(AL138735.7:524..635),AL096814.26:30367..32061, FT AL096814.26:34418..34464,AL096814.26:35361..35511, FT AL096814.26:40492..40876,AL096814.26:42014..42080, FT AL096814.26:43113..43252,AL096814.26:43384..43487, FT AL096814.26:45289..45364,AL096814.26:53671..53759, FT AL096814.26:56854..56967,AL096814.26:63804..64010, FT AL096814.26:67287..67534,AL096814.26:71546..72066) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-002" FT /product="transcriptional regulating factor 1" FT /note="match: ESTs: Em:AW427177 Em:BF600417" FT /note="match: cDNAs: Em:AJ277276.1" FT mRNA join(complement(42418915..42418999), FT complement(AL138735.7:62833..62965), FT complement(AL138735.7:524..635),AL096814.26:30367..32061, FT AL096814.26:34418..34464,AL096814.26:35361..35511, FT AL096814.26:40492..40876,AL096814.26:42014..42080, FT AL096814.26:43113..43252,AL096814.26:43384..43487, FT AL096814.26:45289..45364,AL096814.26:53671..53759, FT AL096814.26:56854..56967,AL096814.26:63804..64010, FT AL096814.26:67323..67534,AL096814.26:71546..72066) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-003" FT /product="transcriptional regulating factor 1" FT /note="match: cDNAs: Em:AJ277275.1" FT mRNA join(complement(42419759..42419783), FT complement(42418915..42418999), FT complement(AL138735.7:62883..62965), FT complement(AL138735.7:524..635),AL096814.26:30367..32061, FT AL096814.26:34418..34464,AL096814.26:35361..35511, FT AL096814.26:36647..36895,AL096814.26:40492..40876, FT AL096814.26:42014..42080,AL096814.26:43113..43252, FT AL096814.26:43384..43487,AL096814.26:45289..45364, FT AL096814.26:53671..53759,AL096814.26:56854..56967, FT AL096814.26:63804..64010,AL096814.26:67323..67534, FT AL096814.26:71546..74990) FT /gene="TRERF1" FT /locus_tag="RP1-139D8.5-001" FT /product="transcriptional regulating factor 1" FT /note="match: ESTs: Em:AA460886 Em:AW117866 Em:BE668765 FT Em:BE671472 Em:BF377628 Em:BF600417 Em:BF724271 Em:BI093857 FT Em:BI255368 Em:BI826136 Em:BM054119 Em:H23193 Em:H23308" FT /note="match: cDNAs: Em:AF297872.1 Em:AK002096.1" FT misc_feature 42439328 FT /note="Clone_right_end: RP11-17F15" FT misc_feature 42439429..42477548 FT /note="annotated region of clone" FT CDS 42467448..42467760 FT /pseudo FT /locus_tag="RP11-256G5.1-001" FT /product="ribosomal protein L36a (RPL36A) pseudogene" FT /note="match: proteins: Sw:O59870 Sw:P83881 Sw:P83883" FT misc_feature 42473549 FT /note="Clone_left_end: RP1-242G1" FT misc_feature 42477549..42579423 FT /note="annotated region of clone" FT mRNA join(42531800..42532135,42541472..42541731, FT 42559889..42559967,42561929..42562042,42571326..42571456, FT 42573459..42573597,42574327..42574389,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5824..5922,AL391814.16:7883..8766) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-003" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: ESTs: Em:AA693825 Em:BE742225 Em:BE744248" FT /note="match: cDNAs: Em:BC024217" FT mRNA join(42531800..42532135,42541472..42541731, FT 42559889..42559967,42561929..42562042,42571326..42571456, FT 42573459..42573597,42574327..42574389,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5655..5753, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:46651..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-001" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: ESTs: Em:AA011477 Em:AA747708 Em:AA884847 FT Em:AI036370 Em:AI243195 Em:AI590279 Em:C02567 Em:N57928 FT Em:W02411" FT /note="match: cDNAs: Em:AB002347" FT mRNA join(42531800..42532135,42541472..42541731, FT 42559889..42559967,42561929..42562042,42571326..42571456, FT 42573459..42573597,42574327..42574389,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5824..5922, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:46651..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-002" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: cDNAs: Em:AK083320.1 Em:AY280958.1 FT Em:CC249278.1" FT CDS join(42532058..42532135,42541472..42541731, FT 42559889..42559967,42561929..42562042,42571326..42571456, FT 42573459..42573597,42574327..42574389,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5824..5922,AL391814.16:7883..7921) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-003" FT /standard_name="OTTHUMP00000016403" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Sw:O70481 Sw:P91133 Sw:Q9VX91" FT /protein_id="CAI19919.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERL FT QSDYVTDDHDREFSVADLSVQIFTVPSLFSISAGRSGSPL" FT CDS join(42532058..42532135,42541472..42541731, FT 42559889..42559967,42561929..42562042,42571326..42571456, FT 42573459..42573597,42574327..42574389,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5655..5753, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:48982..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-001" FT /standard_name="OTTHUMP00000016405" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Em:CE08535 Sw:O70481 Sw:Q8IWV7 FT Sw:Q8IWV8" FT /protein_id="CAI19920.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQL FT QRDFMEDDHERAVSVTALSVQFFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRF FT QFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGM FT DPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQC FT HGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFP FT ELLPLSELSPPMLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKD FT VVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEM FT LYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLPEDENKETGMES FT VIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDT FT ALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSESMLQRVLHLIGM FT ALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI FT RWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQ FT MSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVT FT CILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEKYDPLFMHPDLSCGTHTS FT SCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECLSNTVIPLLL FT PPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSENVDELQLP FT EGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPIMCWGSCAYTIQSI FT ERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKLFASLVPNDSH FT EELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTGDLHIFHLVTMAHIIQILLTSC FT TEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPSGWHLWRSVRAGIMPFLKCSA FT LFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLFQENSEIMNSLIESWCRNSE FT VKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGS FT LLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPY FT LDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL" FT CDS join(42532058..42532135,42541472..42541731, FT 42559889..42559967,42561929..42562042,42571326..42571456, FT 42573459..42573597,42574327..42574389,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5824..5922, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:48982..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-002" FT /standard_name="OTTHUMP00000070741" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Sw:Q6WKZ8" FT /protein_id="CAI95666.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERL FT QSDYVTDDHDREFSVADLSVQIFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRF FT QFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGM FT DPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQC FT HGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFP FT ELLPLSELSPPMLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKD FT VVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEM FT LYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLPEDENKETGMES FT VIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDT FT ALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSESMLQRVLHLIGM FT ALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI FT RWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQ FT MSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVT FT CILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEKYDPLFMHPDLSCGTHTS FT SCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECLSNTVIPLLL FT PPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSENVDELQLP FT EGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPIMCWGSCAYTIQSI FT ERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKLFASLVPNDSH FT EELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTGDLHIFHLVTMAHIIQILLTSC FT TEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPSGWHLWRSVRAGIMPFLKCSA FT LFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLFQENSEIMNSLIESWCRNSE FT VKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGS FT LLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPY FT LDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL" FT misc_feature 42577423 FT /note="Clone_right_end: RP1-242G1" FT misc_feature 42579424..42597092 FT /note="annotated region of clone" FT misc_feature 42596893 FT /note="Clone_left_end: RP3-392M17" FT mRNA join(AL136223.11:56252..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,42579909..42580029, FT 42582809..42582916,42583740..42583828,42585147..42585245, FT 42587206..42588089) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-003" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: cDNAs: Em:BC024217" FT /note="match: ESTs: Em:AA693825 Em:BE742225 Em:BE744248" FT mRNA join(AL136223.11:56252..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,42579909..42580029, FT 42582809..42582916,42583740..42583828,42584978..42585076, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:46651..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-001" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: cDNAs: Em:AB002347" FT /note="match: ESTs: Em:AA011477 Em:AA747708 Em:AA884847 FT Em:AI036370 Em:AI243195 Em:AI590279 Em:C02567 Em:N57928 FT Em:W02411" FT mRNA join(AL136223.11:56252..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,42579909..42580029, FT 42582809..42582916,42583740..42583828,42585147..42585245, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:46651..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-002" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: cDNAs: Em:AK083320.1 Em:AY280958.1 FT Em:CC249278.1" FT CDS join(AL136223.11:56510..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,42579909..42580029, FT 42582809..42582916,42583740..42583828,42585147..42585245, FT 42587206..42587244) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-003" FT /standard_name="OTTHUMP00000016403" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Sw:O70481 Sw:P91133 Sw:Q9VX91" FT /protein_id="CAI14737.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERL FT QSDYVTDDHDREFSVADLSVQIFTVPSLFSISAGRSGSPL" FT CDS join(AL136223.11:56510..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,42579909..42580029, FT 42582809..42582916,42583740..42583828,42584978..42585076, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:48982..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-001" FT /standard_name="OTTHUMP00000016405" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Em:CE08535 Sw:O70481 Sw:Q8IWV7 FT Sw:Q8IWV8" FT /protein_id="CAI14738.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQL FT QRDFMEDDHERAVSVTALSVQFFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRF FT QFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGM FT DPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQC FT HGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFP FT ELLPLSELSPPMLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKD FT VVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEM FT LYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLPEDENKETGMES FT VIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDT FT ALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSESMLQRVLHLIGM FT ALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI FT RWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQ FT MSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVT FT CILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEKYDPLFMHPDLSCGTHTS FT SCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECLSNTVIPLLL FT PPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSENVDELQLP FT EGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPIMCWGSCAYTIQSI FT ERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKLFASLVPNDSH FT EELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTGDLHIFHLVTMAHIIQILLTSC FT TEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPSGWHLWRSVRAGIMPFLKCSA FT LFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLFQENSEIMNSLIESWCRNSE FT VKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGS FT LLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPY FT LDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL" FT CDS join(AL136223.11:56510..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,42579909..42580029, FT 42582809..42582916,42583740..42583828,42585147..42585245, FT complement(AL049843.18:107440..107603), FT complement(AL049843.18:107251..107350), FT complement(AL049843.18:104609..104737), FT complement(AL049843.18:102961..103144), FT complement(AL049843.18:99885..99946), FT complement(AL049843.18:98463..98573), FT complement(AL049843.18:97674..97739), FT complement(AL049843.18:95819..95941), FT complement(AL049843.18:95619..95682), FT complement(AL049843.18:94565..94689), FT complement(AL049843.18:91985..92037), FT complement(AL049843.18:89769..89871), FT complement(AL049843.18:88084..88132), FT complement(AL049843.18:87510..87664), FT complement(AL049843.18:84432..84534), FT complement(AL049843.18:82022..82131), FT complement(AL049843.18:81835..81915), FT complement(AL049843.18:81331..81509), FT complement(AL049843.18:80300..80499), FT complement(AL049843.18:77878..77971), FT complement(AL049843.18:76736..76897), FT complement(AL049843.18:74643..74746), FT complement(AL049843.18:73910..73988), FT complement(AL049843.18:69915..70063), FT complement(AL049843.18:69440..69495), FT complement(AL049843.18:66268..66364), FT complement(AL049843.18:65962..66029), FT complement(AL049843.18:63964..64099), FT complement(AL049843.18:63282..63372), FT complement(AL049843.18:61486..61616), FT complement(AL049843.18:60323..60431), FT complement(AL049843.18:57044..57100), FT complement(AL049843.18:55284..55361), FT complement(AL049843.18:51769..51939), FT complement(AL049843.18:50485..50586), FT complement(AL049843.18:48982..49123)) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-002" FT /standard_name="OTTHUMP00000070741" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Sw:Q6WKZ8" FT /protein_id="CAI95298.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERL FT QSDYVTDDHDREFSVADLSVQIFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRF FT QFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGM FT DPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQC FT HGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFP FT ELLPLSELSPPMLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKD FT VVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEM FT LYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLPEDENKETGMES FT VIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDT FT ALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSESMLQRVLHLIGM FT ALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI FT RWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQ FT MSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVT FT CILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEKYDPLFMHPDLSCGTHTS FT SCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECLSNTVIPLLL FT PPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSENVDELQLP FT EGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPIMCWGSCAYTIQSI FT ERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKLFASLVPNDSH FT EELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTGDLHIFHLVTMAHIIQILLTSC FT TEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPSGWHLWRSVRAGIMPFLKCSA FT LFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLFQENSEIMNSLIESWCRNSE FT VKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGS FT LLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPY FT LDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL" FT misc_feature complement(42597093..42707892) FT /note="annotated region of clone" FT CDS <42694972..>42695438 FT /pseudo FT /locus_tag="RP3-392M17.2-001" FT /product="novel protein similar to ATPase, H+ transporting, FT lysosomal 16kDa, V0 subunit c ATP6V0C" FT /note="match: proteins: Sw:O18882 Sw:P23956 Sw:P27449 FT Sw:P63081" FT mRNA complement(join(42664340..42666245,42672103..42672349, FT 42689492..42690312)) FT /gene="PRPH2" FT /locus_tag="RP3-392M17.1-001" FT /product="peripherin 2 (retinal degeneration, slow)" FT /note="match: cDNAs: Em:AF031238 Em:AF031239 Em:J02884 FT Em:L79914 Em:L79915 Em:M73531 Em:M94047 Em:U27349 Em:U36577 FT Em:X14770 Em:X52113 Em:X52376" FT CDS complement(join(42666033..42666245,42672103..42672349, FT 42689492..42690072)) FT /gene="PRPH2" FT /locus_tag="RP3-392M17.1-001" FT /standard_name="OTTHUMP00000016404" FT /product="peripherin 2 (retinal degeneration, slow)" FT /note="match: proteins: Sw:O42281 Sw:O42282 Sw:O42581 FT Sw:O42582 Sw:O42583 Sw:P15499 Sw:P17438 Sw:P17810 Sw:P23942 FT Sw:P35906 Sw:P52204" FT /protein_id="CAB75420.1" FT /translation="MALLKVKFDQKKRVKLAQGLWLMNWFSVLAGIIIFSLGLFLKIEL FT RKRSDVMNNSESHFVPNSLIGMGVLSCVFNSLAGKICYDALDPAKYARWKPWLKPYLAI FT CVLFNIILFLVALCCFLLRGSLENTLGQGLKNGMKYYRDTDTPGRCFMKKTIDMLQIEF FT KCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVPFSCCNPSSPRPC FT IQYQITNNSAHYSYDHQTEELNLWVRGCRAALLSYYSSLMNSMGVVTLLIWLFEVTITI FT GLRYLQTSLDGVSNPEESESESQGWLLERSVPETWKAFLESVKKLGKGNQVEAEGADAG FT QAPEAG" FT polyA_signal complement(42664354..42664359) FT polyA_site complement(42664338) FT polyA_site 42661241 FT polyA_signal 42661218..42661223 FT mRNA join(AL136223.11:56252..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5655..5753,42600290..42600453, FT 42600543..42600642,42603156..42603284,42604749..42604932, FT 42607947..42608008,42609320..42609430,42610154..42610219, FT 42611952..42612074,42612211..42612274,42613204..42613328, FT 42615856..42615908,42618022..42618124,42619761..42619809, FT 42620229..42620383,42623359..42623461,42625762..42625871, FT 42625978..42626058,42626384..42626562,42627394..42627593, FT 42629922..42630015,42630996..42631157,42633147..42633250, FT 42633905..42633983,42637830..42637978,42638398..42638453, FT 42641529..42641625,42641864..42641931,42643794..42643929, FT 42644521..42644611,42646277..42646407,42647462..42647570, FT 42650793..42650849,42652532..42652609,42655954..42656124, FT 42657307..42657408,42658770..42661242) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-001" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: ESTs: Em:AA011477 Em:AA747708 Em:AA884847 FT Em:AI036370 Em:AI243195 Em:AI590279 Em:C02567 Em:N57928 FT Em:W02411" FT /note="match: cDNAs: Em:AB002347" FT mRNA join(AL136223.11:56252..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5824..5922,42600290..42600453, FT 42600543..42600642,42603156..42603284,42604749..42604932, FT 42607947..42608008,42609320..42609430,42610154..42610219, FT 42611952..42612074,42612211..42612274,42613204..42613328, FT 42615856..42615908,42618022..42618124,42619761..42619809, FT 42620229..42620383,42623359..42623461,42625762..42625871, FT 42625978..42626058,42626384..42626562,42627394..42627593, FT 42629922..42630015,42630996..42631157,42633147..42633250, FT 42633905..42633983,42637830..42637978,42638398..42638453, FT 42641529..42641625,42641864..42641931,42643794..42643929, FT 42644521..42644611,42646277..42646407,42647462..42647570, FT 42650793..42650849,42652532..42652609,42655954..42656124, FT 42657307..42657408,42658770..42661242) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-002" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: cDNAs: Em:AK083320.1 Em:AY280958.1 FT Em:CC249278.1" FT CDS join(AL136223.11:56510..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5655..5753,42600290..42600453, FT 42600543..42600642,42603156..42603284,42604749..42604932, FT 42607947..42608008,42609320..42609430,42610154..42610219, FT 42611952..42612074,42612211..42612274,42613204..42613328, FT 42615856..42615908,42618022..42618124,42619761..42619809, FT 42620229..42620383,42623359..42623461,42625762..42625871, FT 42625978..42626058,42626384..42626562,42627394..42627593, FT 42629922..42630015,42630996..42631157,42633147..42633250, FT 42633905..42633983,42637830..42637978,42638398..42638453, FT 42641529..42641625,42641864..42641931,42643794..42643929, FT 42644521..42644611,42646277..42646407,42647462..42647570, FT 42650793..42650849,42652532..42652609,42655954..42656124, FT 42657307..42657408,42658770..42658911) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-001" FT /standard_name="OTTHUMP00000016405" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Em:CE08535 Sw:O70481 Sw:Q8IWV7 FT Sw:Q8IWV8" FT /protein_id="CAI20399.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQL FT QRDFMEDDHERAVSVTALSVQFFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRF FT QFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGM FT DPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQC FT HGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFP FT ELLPLSELSPPMLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKD FT VVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEM FT LYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLPEDENKETGMES FT VIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDT FT ALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSESMLQRVLHLIGM FT ALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI FT RWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQ FT MSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVT FT CILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEKYDPLFMHPDLSCGTHTS FT SCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECLSNTVIPLLL FT PPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSENVDELQLP FT EGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPIMCWGSCAYTIQSI FT ERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKLFASLVPNDSH FT EELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTGDLHIFHLVTMAHIIQILLTSC FT TEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPSGWHLWRSVRAGIMPFLKCSA FT LFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLFQENSEIMNSLIESWCRNSE FT VKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGS FT LLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPY FT LDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL" FT CDS join(AL136223.11:56510..56587,AL136223.11:65924..66183, FT AL136223.11:84341..84419,AL136223.11:86381..86494, FT AL136223.11:95778..95908,AL136223.11:97911..98049, FT AL136223.11:98779..98841,AL391814.16:586..706, FT AL391814.16:3486..3593,AL391814.16:4417..4505, FT AL391814.16:5824..5922,42600290..42600453, FT 42600543..42600642,42603156..42603284,42604749..42604932, FT 42607947..42608008,42609320..42609430,42610154..42610219, FT 42611952..42612074,42612211..42612274,42613204..42613328, FT 42615856..42615908,42618022..42618124,42619761..42619809, FT 42620229..42620383,42623359..42623461,42625762..42625871, FT 42625978..42626058,42626384..42626562,42627394..42627593, FT 42629922..42630015,42630996..42631157,42633147..42633250, FT 42633905..42633983,42637830..42637978,42638398..42638453, FT 42641529..42641625,42641864..42641931,42643794..42643929, FT 42644521..42644611,42646277..42646407,42647462..42647570, FT 42650793..42650849,42652532..42652609,42655954..42656124, FT 42657307..42657408,42658770..42658911) FT /gene="UBR2" FT /locus_tag="RP3-392M17.3-002" FT /standard_name="OTTHUMP00000070741" FT /product="ubiquitin protein ligase E3 component n-recognin FT 2" FT /note="match: proteins: Sw:Q6WKZ8" FT /protein_id="CAI95685.1" FT /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHY FT VPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFK FT VGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYC FT QKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVE FT KSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCE FT QAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGL FT QEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERL FT QSDYVTDDHDREFSVADLSVQIFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRF FT QFERYTALQAFKFRRVQSLILDLKYVLISKPTEWSDELRQKFLEGFDAFLELLKCMQGM FT DPITRQVGQHIEMEPEWEAAFTLQMKLTHVISMMQDWCASDEKVLIEAYKKCLAVLMQC FT HGGYTDGEQPITLSICGHSVETIRYCVSQEKVSIHLPVSRLLAGLHVLLSKSEVAYKFP FT ELLPLSELSPPMLIEHPLRCLVLCAQVHAGMWRRNGFSLVNQIYYYHNVKCRREMFDKD FT VVMLQTGVSMMDPNHFLMIMLSRFELYQIFSTPDYGKRFSSEITHKDVVQQNNTLIEEM FT LYLIIMLVGERFSPGVGQVNATDEIKREIIHQLSIKPMAHSELVKSLPEDENKETGMES FT VIEAVAHFKKPGLTGRGMYELKPECAKEFNLYFYHFSRAEQSKAEEAQRKLKRQNREDT FT ALPPPVLPPFCPLFASLVNILQSDVMLCIMGTILQWAVEHNGYAWSESMLQRVLHLIGM FT ALQEEKQHLENVTEEHVVTFTFTQKISKPGEAPKNSPSILAMLETLQNAPYLEVHKDMI FT RWILKTFNAVKKMRESSPTSPVAETEGTIMEESSRDKDKAERKRKAEIARLRREKIMAQ FT MSEMQRHFIDENKELFQQTLELDASTSAVLDHSPVASDMTLTALGPAQTQVPEQRQFVT FT CILCQEEQEVKVESRAMVLAAFVQRSTVLSKNRSKFIQDPEKYDPLFMHPDLSCGTHTS FT SCGHIMHAHCWQRYFDSVQAKEQRRQQRLRLHTSYDVENGEFLCPLCECLSNTVIPLLL FT PPRNIFNNRLNFSDQPNLTQWIRTISQQIKALQFLRKEESTPNNASTKNSENVDELQLP FT EGFRPDFRPKIPYSESIKEMLTTFGTATYKVGLKVHPNEEDPRVPIMCWGSCAYTIQSI FT ERILSDEDKPLFGPLPCRLDDCLRSLTRFAAAHWTVASVSVVQGHFCKLFASLVPNDSH FT EELPCILDIDMFHLLVGLVLAFPALQCQDFSGISLGTGDLHIFHLVTMAHIIQILLTSC FT TEENGMDQENPPCEEESAVLALYKTLHQYTGSALKEIPSGWHLWRSVRAGIMPFLKCSA FT LFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLFQENSEIMNSLIESWCRNSE FT VKRYLEGERDAIRYPRESNKLINLPEDYSSLINQASNFSCPKSGGDKSRAPTLCLVCGS FT LLCSQSYCCQTELEGEDVGACTAHTYSCGSGVGIFLRVRECQVLFLAGKTKGCFYSPPY FT LDDYGETDQGLRRGNPLHLCKERFKKIQKLWHQHSVTEEIGHAQEANQTLVGIDWQHL" FT misc_feature complement(42605062..42605104) FT /note="Single clone region. Assembly confirmed by BAMHI FT digest data" FT misc_feature complement(42597093) FT /note="Clone_left_end: RP3-392M17" FT misc_feature 42707893..42806132 FT /note="annotated region of clone" FT polyA_site complement(42712219) FT mRNA complement(42712219..42713834) FT /gene="TBCC" FT /locus_tag="RP11-501I18.1-001" FT /product="tubulin folding cofactor C" FT /note="match: cDNAs: Em:AK012950.1 Em:U61234.1" FT polyA_signal complement(42712252..42712257) FT CDS complement(42712771..42713811) FT /gene="TBCC" FT /locus_tag="RP11-501I18.1-001" FT /standard_name="OTTHUMP00000016406" FT /product="tubulin folding cofactor C" FT /note="match: proteins: Sw:Q15814 Tr:Q9SMR2" FT /protein_id="CAI14818.1" FT /translation="MESVSCSAAAVRTGDMESQRDLSLVPERLQRREQERQLEVERRKQ FT KRQNQEVEKENSHFFVATFVRERAAVEELLERAESVERLEEAASRLQGLQKLINDSVFF FT LAAYDLRQGQEALARLQAALAERRRGLQPKKRFAFKTRGKDAASSTKVDAAPGIPPAVE FT SIQDSPLPKKAEGDLGPSWVCGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNP FT NTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIV FT EDCSGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEE FT RNIQWD" FT mRNA complement(join(42712236..42713833,42714018..42714558)) FT /gene="TBCC" FT /locus_tag="RP11-501I18.1-002" FT /product="tubulin folding cofactor C" FT /note="match: cDNAs: Em:BC017479" FT mRNA join(42714696..42714761,42749577..42749661, FT 42749765..42749839,42778044..42778139,42789756..42789801, FT 42790534..42790582,42790673..42790741,42796231..42797910, FT complement(AL035587.5:99207..99312), FT complement(AL035587.5:97666..97766), FT complement(AL035587.5:95487..95548), FT complement(AL035587.5:94168..94313), FT complement(AL035587.5:91048..91142), FT complement(AL035587.5:88792..88894), FT complement(AL035587.5:83014..86745)) FT /gene="RP3-475N16.5" FT /locus_tag="RP3-475N16.5-001" FT /product="novel protein" FT /note="match: ESTs: Em:BI495351.1 Em:CA429167.1" FT /note="match: cDNAs: Em:CR627378.1 Em:D87077.2" FT misc_feature 42749645..42749661 FT /note="Weak data. Sequence from dGTP reads only" FT mRNA join(42756998..42757549,42757880..42759057) FT /locus_tag="RP11-501I18.2-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:AK024196.1" FT CDS join(42789761..42789801,42790534..42790582, FT 42790673..42790741,42796231..42797910, FT complement(AL035587.5:99207..99312), FT complement(AL035587.5:97666..97766), FT complement(AL035587.5:95487..95548), FT complement(AL035587.5:94168..94313), FT complement(AL035587.5:91048..91142), FT complement(AL035587.5:88792..88894), FT complement(AL035587.5:85958..86745)) FT /gene="RP3-475N16.5" FT /locus_tag="RP3-475N16.5-001" FT /standard_name="OTTHUMP00000016407" FT /product="novel protein" FT /protein_id="CAI14820.2" FT /translation="MDDDDDSCLLDLIGDPQALNYFLHGPSNKSSNDDLTNAGYSAANS FT NSIFANSSNADPKSSLKGVSNQLGEGPSDGLPLSSSLQFLEDELESSPLPDLTEDQPFD FT ILQKSLQEANITEQTLAEEAYLDASIGSSQQFAQAQLHPSSSASFTQASNVSNYSGQTL FT QPIGVTHVPVGASFASNTVGVQHGFMQHVGISVPSQHLSNSSQISGSGQIQLIGSFGNH FT PSMMTINNLDGSQIILKGSGQQAPSNVSGGLLVHRQTPNGNSLFGNSSSSPVAQPVTVP FT FNSTNFQTSLPVHNIIIQRGLAPNSNKVPINIQPKPIQMGQQNTYNVNNLGIQQHHVQQ FT GISFASASSPQGSVVGPHMSVNIVNQQNTRKPVTSQAVSSTGGSIVIHSPMGQPHAPQS FT QFLIPTSLSVSSNSVHHVQTINGQLLQTQPSQLISGQVASEHVMLNRNSSNMLRTNQPY FT TGPMLNNQNTAVHLVSGQTFAASGSPVIANHASPQLVGGQMPLQQASPTVLHLSPGQSS FT VSQGRPGFATMPSVTSMSGPSRFPAVSSASTAHPSLGSAVQSGSSGSNFTGDQLTQPNR FT TPVPVSVSHRLPVSSSKSTSTFSNTPGTGTQQQFFCQAQKKCLNQTSPISAPKTTDGLR FT QAQIPGLLSTTLPGQDSGSKVISASLGTAQPQQEKVVGSSPGHPAVQVESHSGGQKRPA FT AKQLTKGAFILQQLQRDQAHTVTPDKSHFRSLSDAVQRLLSYHVCQGSMPTEEDLRKVD FT NEFETVATQLLKRTQAMLNKYRCLLLEDAMRINPSAEMVMIDRMFNQEERASLSRDKRL FT ALVDPEGFQADFCCSFKLDKAAHETQFGRSDQHGSKASSSLQPPAKAQGRDRAKTGVTE FT PMNHDQFHLVPNHIVVSAEGNISKKTECLGRALKFDKVGLVQYQSTSEEKASRREPLKA FT SQCSPGPEGHRKTSSRSDHGTESKLSSILADSHLEMTCNNSFQDKSLRNSPKNEVLHTD FT IMKGSGEPQPDLQLTKSLETTFKNILELKKAGRQPQSDPTVSGSVELDFPNFSPMASQE FT NCLEKFIPDHSEGVVETDSILEAAVNSILEC" FT misc_feature 42805933 FT /note="Clone_left_end: RP3-475N16" FT misc_feature complement(42806133..42919141) FT /note="annotated region of clone" FT mRNA join(AL353716.18:6904..6969,AL353716.18:41785..41869, FT AL353716.18:41973..42047,AL353716.18:70252..70347, FT AL353716.18:81964..82009,AL353716.18:82742..82790, FT AL353716.18:82881..82949,AL353716.18:88439..90118, FT 42819830..42819935,42821376..42821476,42823594..42823655, FT 42824829..42824974,42828000..42828094,42830248..42830350, FT 42832397..42836128) FT /gene="RP3-475N16.5" FT /locus_tag="RP3-475N16.5-001" FT /product="novel protein" FT /note="match: ESTs: Em:BI495351.1 Em:CA429167.1" FT /note="match: cDNAs: Em:CR627378.1 Em:D87077.2" FT mRNA join(42908102..42908344,42908511..42908667, FT 42909248..42909353,42911536..42911708) FT /locus_tag="RP3-475N16.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF341178" FT polyA_site 42907025 FT polyA_site 42907008 FT polyA_site 42907001 FT mRNA join(42896938..42897459,42902213..42902336, FT 42903312..42903408,42905455..42905577,42905828..42905945, FT 42906306..42907025) FT /locus_tag="RP3-475N16.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA002532 Em:AA048794 Em:AA065251 FT Em:AA065252 Em:AA065254 Em:AA065255 Em:AA065262 Em:AA065263 FT Em:AA251526 Em:AA261570 Em:AA292739 Em:AA315000 Em:AA331641 FT Em:AA378222 Em:AA393388 Em:AA410700 Em:AA419155 Em:AA446743 FT Em:AA456338 Em:AA468594 Em:AA478329 Em:AA527588 Em:AA639468 FT Em:AA772406 Em:AA810253 Em:AF150177 Em:AI050976 Em:AI093040 FT Em:AI095209 Em:AI141843 Em:AI143093 Em:AI193019 Em:AI202110 FT Em:AI215611 Em:AI249023 Em:AI355887 Em:AI356413 Em:AI386455 FT Em:AI391065 Em:AI413153 Em:AI435295 Em:AI464828 Em:AI479630 FT Em:AI762318 Em:AI878843 Em:AI887652 Em:AI992170 Em:AW007167 FT Em:C00258 Em:C18340 Em:D63172 Em:H44663 Em:H44749 Em:N31024 FT Em:R24856 Em:R44560 Em:T10814 Em:T12239 Em:T55954 Em:T69638 FT Em:T85390 Em:W27536 Em:W29254 Em:W52850 Em:W67832 Em:W69640 FT Em:Z97785" FT /note="match: cDNAs: Em:U80744 Em:X66602" FT CDS join(42897309..42897459,42902213..42902336, FT 42903312..42903408,42905455..42905577,42905828..42905945, FT 42906306..42906529) FT /locus_tag="RP3-475N16.2-001" FT /standard_name="OTTHUMP00000016408" FT /product="novel protein" FT /note="match: proteins: Tr:O15412" FT /protein_id="CAB75301.1" FT /translation="MDSMPEPASRCLLLLPLLLLLLLLLPAPELGPSQAGAEENDWVRL FT PSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILDQKASGVKYTKSDLRLIEVTETIC FT KRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVADLK FT KQCDVLVEEFEEVIEDWYRNHQEEDLTEFLCANHVLKGKDTSCLAEQWSGKKGDTAALG FT GKKSKKKSSRAKAAGGRSSSSKQRKELGGLEGDPSPEEDEGIQKASPLTHSPPDEL" FT polyA_site 42893571 FT polyA_signal 42893547..42893552 FT mRNA join(42883727..42883865,42890765..42891085, FT 42891967..42892011,42892999..42893573) FT /gene="PTCRA" FT /locus_tag="RP3-475N16.3-001" FT /product="pre T-cell antigen receptor alpha" FT /note="match: cDNAs: Em:BC069336.1 Em:BC100772.1 FT Em:BC100773.1 Em:BC100773.2 Em:U36759.1" FT CDS join(42883808..42883865,42890765..42891085, FT 42891967..42892011,42892999..42893420) FT /gene="PTCRA" FT /locus_tag="RP3-475N16.3-001" FT /standard_name="OTTHUMP00000016409" FT /product="pre T-cell antigen receptor alpha" FT /note="match: proteins: Tr:Q6ISU1.1" FT /protein_id="CAI21484.2" FT /translation="MAGTWLLLLLALGCPALPTGVGGTPFPSLAPPIMLLVDGKQQMVV FT VCLVLDVAPPGLDSPIWFSAGNGSALDAFTYGPSPATDGTWTNLAHLSLPSEELASWEP FT LVCHTGPGAEGHSRSTQPMHLSGEASTARTCPQEPLRGTPGGALWLGVLRLLLFKLLLF FT DLLLTCSCLCDPAGPLPSPATTTRLRALGSHRLHPATETGGREATSSPRPQPRDRRWGD FT TPPGRKPGSPVWGEGSYLSSYPTCPAQAWCSRSALRAPSSSLGAFFAGDLPPPLQAGAA FT " FT polyA_site 42857634 FT polyA_site 42857627 FT polyA_signal 42857608..42857613 FT polyA_signal 42857555..42857560 FT polyA_site 42853987 FT polyA_signal 42853962..42853967 FT mRNA join(42853315..42853821,42853994..42854208, FT 42854898..42854976) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-009" FT /product="ribosomal protein L7-like 1" FT /note="match: ESTs: Em:CX781752.1" FT mRNA join(42848599..42848704,42851189..42851352, FT 42851596..42851679,42852351..42852488,42853712..42853821, FT 42853993..42854092) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-008" FT /product="ribosomal protein L7-like 1" FT /note="match: ESTs: Em:CR993296.1" FT mRNA join(42847356..42847689,42851189..42851352, FT 42852351..42852488,42853712..42853821,42853994..42854208, FT 42854898..42855039,42856111..42857179) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-005" FT /product="ribosomal protein L7-like 1" FT /note="match: ESTs: Em:DA307671.1" FT /note="match: cDNAs: Em:AK021904.1" FT mRNA join(42847420..42847689,42848599..42848704, FT 42851189..42851352,42852351..42852488,42853712..42853821, FT 42853994..42854208,42854898..42857663) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-001" FT /product="ribosomal protein L7-like 1" FT /note="match: ESTs: Em:BM978105.1 Em:CA421055.1" FT /note="match: cDNAs: Em:BC058020.1 Em:CR595869.1 FT Em:CR601324.1 Em:CR857129.1" FT CDS join(42847676..42847689,42848599..42848704, FT 42851189..42851352,42852351..42852488,42853712..42853821, FT 42853994..42854202) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-001" FT /standard_name="OTTHUMP00000016410" FT /product="ribosomal protein L7-like 1" FT /protein_id="CAI21486.1" FT /translation="MAEQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGK FT GLRFKRLESFLHDSWRQKRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQ FT RTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNK FT TIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARHATKNRV FT GFLKEMGTPGYRGERINQLIRQLN" FT mRNA join(42847377..42847689,42848599..42848820, FT 42851189..42851352,42852351..42852488,42853712..42853821, FT 42853994..42854748) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-002" FT /product="ribosomal protein L7-like 1" FT /note="match: cDNAs: Em:BC064519.1" FT mRNA join(42847373..42847689,42848599..42848704, FT 42851189..42851352,42852351..42852488,42853712..42853821, FT 42853994..42857634) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-003" FT /product="ribosomal protein L7-like 1" FT /note="match: ESTs: Em:CN333340.1" FT /note="match: cDNAs: Em:BC073890.1" FT mRNA join(42847658..42847689,42851057..42851514) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-006" FT /product="ribosomal protein L7-like 1" FT /note="match: ESTs: Em:DA017299.1" FT mRNA join(42847667..42847689,42848599..42850746) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-004" FT /product="ribosomal protein L7-like 1" FT /note="match: cDNAs: Em:AK091341.1" FT mRNA join(42847662..42847689,42848296..42848749) FT /gene="RPL7L1" FT /locus_tag="RP3-475N16.4-007" FT /product="ribosomal protein L7-like 1" FT /note="match: ESTs: Em:DA016153.1" FT CDS join(AL353716.18:81969..82009,AL353716.18:82742..82790, FT AL353716.18:82881..82949,AL353716.18:88439..90118, FT 42819830..42819935,42821376..42821476,42823594..42823655, FT 42824829..42824974,42828000..42828094,42830248..42830350, FT 42832397..42833184) FT /gene="RP3-475N16.5" FT /locus_tag="RP3-475N16.5-001" FT /standard_name="OTTHUMP00000016407" FT /product="novel protein" FT /protein_id="CAI21488.2" FT /translation="MDDDDDSCLLDLIGDPQALNYFLHGPSNKSSNDDLTNAGYSAANS FT NSIFANSSNADPKSSLKGVSNQLGEGPSDGLPLSSSLQFLEDELESSPLPDLTEDQPFD FT ILQKSLQEANITEQTLAEEAYLDASIGSSQQFAQAQLHPSSSASFTQASNVSNYSGQTL FT QPIGVTHVPVGASFASNTVGVQHGFMQHVGISVPSQHLSNSSQISGSGQIQLIGSFGNH FT PSMMTINNLDGSQIILKGSGQQAPSNVSGGLLVHRQTPNGNSLFGNSSSSPVAQPVTVP FT FNSTNFQTSLPVHNIIIQRGLAPNSNKVPINIQPKPIQMGQQNTYNVNNLGIQQHHVQQ FT GISFASASSPQGSVVGPHMSVNIVNQQNTRKPVTSQAVSSTGGSIVIHSPMGQPHAPQS FT QFLIPTSLSVSSNSVHHVQTINGQLLQTQPSQLISGQVASEHVMLNRNSSNMLRTNQPY FT TGPMLNNQNTAVHLVSGQTFAASGSPVIANHASPQLVGGQMPLQQASPTVLHLSPGQSS FT VSQGRPGFATMPSVTSMSGPSRFPAVSSASTAHPSLGSAVQSGSSGSNFTGDQLTQPNR FT TPVPVSVSHRLPVSSSKSTSTFSNTPGTGTQQQFFCQAQKKCLNQTSPISAPKTTDGLR FT QAQIPGLLSTTLPGQDSGSKVISASLGTAQPQQEKVVGSSPGHPAVQVESHSGGQKRPA FT AKQLTKGAFILQQLQRDQAHTVTPDKSHFRSLSDAVQRLLSYHVCQGSMPTEEDLRKVD FT NEFETVATQLLKRTQAMLNKYRCLLLEDAMRINPSAEMVMIDRMFNQEERASLSRDKRL FT ALVDPEGFQADFCCSFKLDKAAHETQFGRSDQHGSKASSSLQPPAKAQGRDRAKTGVTE FT PMNHDQFHLVPNHIVVSAEGNISKKTECLGRALKFDKVGLVQYQSTSEEKASRREPLKA FT SQCSPGPEGHRKTSSRSDHGTESKLSSILADSHLEMTCNNSFQDKSLRNSPKNEVLHTD FT IMKGSGEPQPDLQLTKSLETTFKNILELKKAGRQPQSDPTVSGSVELDFPNFSPMASQE FT NCLEKFIPDHSEGVVETDSILEAAVNSILEC" FT polyA_site 42836297 FT polyA_site 42836294 FT polyA_signal 42836271..42836276 FT misc_feature complement(42806133) FT /note="Clone_left_end: RP3-475N16" FT misc_feature 42919142..42950256 FT /note="annotated region of clone" FT CDS complement(<42924083..42924503) FT /pseudo FT /locus_tag="RP1-125M3.2-001" FT /product="ribosomal protein L24 (RPL24) pseudogene" FT /note="match: proteins: Sw:P61122.1 Sw:P83731.1 Sw:P83732.1 FT Sw:Q66WF5.1 Sw:Q862I1.2 Sw:Q8BP67.2" FT mRNA join(42928496..42928711,42929950..42930077, FT 42930500..42930616,42930810..42930952,42931066..42931187, FT 42931273..42931618) FT /gene="GNMT" FT /locus_tag="RP1-125M3.1-001" FT /product="glycine N-methyltransferase" FT /note="match: ESTs: Em:AA097563 Em:AA572480 Em:AA987099 FT Em:AI047325 Em:AI048195 Em:AI048313 Em:AI117090 Em:AI195685 FT Em:AI195709 Em:AI226533 Em:AI526815 Em:AI530273 Em:AI662896 FT Em:AV657040 Em:AV661620 Em:AV683260 Em:AV685800 Em:AV687063 FT Em:AV689183 Em:AV690441 Em:AV690474 Em:AV693374 Em:AV694467 FT Em:AV694473 Em:AV696701 Em:BE030479 Em:BF232952 Em:BF233111 FT Em:BF234213 Em:BF234450 Em:BF234871 Em:BF384771 Em:BF385005 FT Em:BF385153 Em:BF385573 Em:BF385687 Em:BF532323 Em:BF532646 FT Em:BF533301 Em:BF540570 Em:BF659861 Em:BI144498 Em:BI144963 FT Em:BI145348 Em:BI146625 Em:BI147395 Em:BI147781 Em:BI147946 FT Em:BI148208 Em:BI148330 Em:BI217234 Em:BI218453 Em:BI218788 FT Em:BI219548 Em:BI220969 Em:BI221987 Em:BI246444 Em:BI247768 FT Em:BI256039 Em:BI327563 Em:BI328407 Em:BI328763 Em:BI328838 FT Em:BI328883 Em:BI329872 Em:BI330600 Em:BI331564 Em:BI774009 FT Em:BI837303 Em:W14826 Em:W83078" FT /note="match: cDNAs: Em:AF101477.1 Em:BC014283.1 FT Em:D13307.1 Em:D13308.1 Em:D89664.1 Em:E10662.1 Em:X06150.1 FT Em:X62250.1" FT CDS join(42928506..42928711,42929950..42930077, FT 42930500..42930616,42930810..42930952,42931066..42931187, FT 42931273..42931444) FT /gene="GNMT" FT /locus_tag="RP1-125M3.1-001" FT /standard_name="OTTHUMP00000016412" FT /product="glycine N-methyltransferase" FT /note="match: proteins: Sw:P13255 Sw:Q14749 Sw:Q29513 FT Sw:Q29555 Sw:Q9QXF8" FT /protein_id="CAI19462.1" FT /translation="MVDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEY FT KAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRH FT EPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNI FT ASMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLD FT YTVQVPGAGQDGSPGLSKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQT FT YIPCYFIHVLKRTD" FT mRNA complement(join(42931608..42932209,42932528..42932667, FT 42932813..42932890,42932990..42933106,42933419..42933527, FT 42933782..42933843,42933980..42934185,42934263..42934395, FT 42934520..42934596,42935106..42935301,42936028..42936236, FT 42936612..42936723,42937406..42937539,42937623..42937725, FT 42941741..42941824,42942613..42942776,42946007..42946958)) FT /gene="PEX6" FT /locus_tag="RP1-125M3.3-001" FT /product="peroxisomal biogenesis factor 6" FT /note="match: ESTs: Em:AA002168 Em:AA460646 Em:AA938770 FT Em:AI093165 Em:AI337946 Em:AI566200 Em:AI620228 Em:AI625862 FT Em:AI650615 Em:AI654922 Em:AI819837 Em:AI825036 Em:AI927572 FT Em:AW195862 Em:AW195870 Em:AW197783 Em:AW197892 Em:AW197902 FT Em:AW243500 Em:AW275296 Em:AW516396 Em:BE673456 Em:BF314315 FT Em:BF433039 Em:BF945937 Em:BF965945 Em:BM128966 Em:BM129258 FT Em:BM470130 Em:D20352 Em:U54728 Em:W56671 Em:W56736" FT /note="match: cDNAs: Em:BC003424.1 Em:D63673.1 Em:D83703.1" FT CDS complement(join(42932073..42932209,42932528..42932667, FT 42932813..42932890,42932990..42933106,42933419..42933527, FT 42933782..42933843,42933980..42934185,42934263..42934395, FT 42934520..42934596,42935106..42935301,42936028..42936236, FT 42936612..42936723,42937406..42937539,42937623..42937725, FT 42941741..42941824,42942613..42942776,42946007..42946888)) FT /gene="PEX6" FT /locus_tag="RP1-125M3.3-001" FT /standard_name="OTTHUMP00000016413" FT /product="peroxisomal biogenesis factor 6" FT /note="match: proteins: Sw:P54777 Sw:Q13608" FT /protein_id="CAI19463.1" FT /translation="MALAVLRVLEPFPTETPPLAVLLPPGGPWPAAELGLVLALRPAGE FT SPAGPALLVAALEGPDAGTEEQGPGPPQLLVSRALLRLLALGSGAWVRARAVRRPPALG FT WALLGTSLGPGLGPRVGPLLVRRGETLPVPGPRVLETRPALQGLLGPGTRLAVTELRGR FT ARLCPESGDSSRPPPPPVVSSFAVSGTVRRLQGVLGGTGDSLGVSRSCLRGLGLFQGEW FT VWVAQARESSNTSQPHLARVQVLEPRWDLSDRLGPGSGPLGEPLADGLALVPATLAFNL FT GCDPLEMGELRIQRYLEGSIAPEDKGSCSLLPGPPFARELHIEIVSSPHYSTNGNYDGV FT LYRHFQIPRVVQEGDVLCVPTIGQVEILEGSPEKLPRWREMFFKVKKTVGEAPDGPASA FT YLADTTHTSLYMVGSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRLQPGGA FT LLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSR FT ARRCRPAVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRA FT QDLPADVQTAFPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDL FT YALLTHSSRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAV FT GAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLL FT AKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSR FT GRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVG FT ANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRV FT HDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQELLRYKRIQRKFAAC" FT misc_feature 42950057 FT /note="Clone_left_end: RP1-20C7" FT misc_feature 42950257..43015768 FT /note="annotated region of clone" FT mRNA complement(join(43013325..43013420,43013724..43013829, FT 43013974..43014145,43014249..43014339,43014618..43014845, FT 43015685..43015727,AL355385.15:219..231)) FT /gene="CUL7" FT /locus_tag="RP1-20C7.5-002" FT /product="cullin 7" FT /note="match: ESTs: Em:BG424177.1" FT mRNA join(42952327..42952442,42957349..42957426, FT 42974201..42974417,42974649..42974848,42974934..42975044, FT 42975152..42975244,42975673..42975803,42975939..42975998, FT 42976105..42976213,42976431..42976484,42976795..42976965, FT 42977060..42977187,42978206..42978307,42978402..42978474, FT 42978619..42978735,42978887..42980076) FT /gene="PPP2R5D" FT /locus_tag="RP1-20C7.2-001" FT /product="protein phosphatase 2, regulatory subunit B', FT delta isoform" FT /note="match: ESTs: Em:AL047473 Em:AL525550 Em:AL544884 FT Em:AL552848 Em:AL555815 Em:AL557204 Em:AU099201 Em:AW761723 FT Em:AW822675 Em:BB569751 Em:BB648637 Em:BB840557 Em:BE032621 FT Em:BE244358 Em:BE254648 Em:BE273518 Em:BE295503 Em:BE410281 FT Em:BE561207 Em:BE563270 Em:BE730330 Em:BE735786 Em:BE735812 FT Em:BE871644 Em:BF449393 Em:BF567123 Em:BG035789 Em:BG036746 FT Em:BG244945 Em:BG281991 Em:BG395116 Em:BG421572 Em:BG423358 FT Em:BG698903 Em:BG699879 Em:BG702420 Em:BG921584 Em:BI105422 FT Em:BI261448 Em:BI261873 Em:BI462426 Em:BI523572 Em:BI552411 FT Em:BI752149 Em:BI764690 Em:BI767255 Em:BI768337 Em:BI769262 FT Em:BI770226 Em:BI821893 Em:BI823595 Em:BI853710 Em:BI854593 FT Em:BM460444 Em:BM465529 Em:BM470356 Em:BM471847 FT Em:BM474199" FT /note="match: cDNAs: Em:AB000634.1 Em:AB000635.1 FT Em:AB053464.1 Em:AB055635.1 Em:AB055636.1 Em:AF298157.1 FT Em:AF316616.2 Em:AK012612.1 Em:BC001095.1 Em:BC001175.1 FT Em:BC003979.1 Em:BC010692.1 Em:BC010716.1 Em:BC016183.1 FT Em:D26445.1 Em:D78360.1 Em:L42374.1 Em:L42375.1 Em:L76702.1 FT Em:L76703.1 Em:U37352.1 Em:U37353.1 Em:U37769.1 Em:U37770.1 FT Em:U38191.1 Em:U38192.1 Em:U38193.1 Em:U38195.1 Em:U59418.1 FT Em:Z69028.1 Em:Z69029.1 Em:Z69030.1" FT CDS join(42952416..42952442,42957349..42957426, FT 42974201..42974417,42974649..42974848,42974934..42975044, FT 42975152..42975244,42975673..42975803,42975939..42975998, FT 42976105..42976213,42976431..42976484,42976795..42976965, FT 42977060..42977187,42978206..42978307,42978402..42978474, FT 42978619..42978735,42978887..42979024) FT /gene="PPP2R5D" FT /locus_tag="RP1-20C7.2-001" FT /standard_name="OTTHUMP00000016416" FT /product="protein phosphatase 2, regulatory subunit B', FT delta isoform" FT /note="match: proteins: Sw:Q13362 Sw:Q14738 Sw:Q60996 FT Tr:Q7L7W2 Tr:Q91V89 Tr:Q96L52 Tr:Q99PC9 Tr:Q9NFM7 FT Tr:Q9U3Q1" FT /protein_id="CAI19791.1" FT /translation="MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQ FT PQAQSQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLP FT ALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVV FT TEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLE FT SPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQIN FT HIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYH FT PQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKV FT MEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHW FT NKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNP FT QYPMFRAPPPLPPVYSMETETPTAEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELP FT QDVYTIKALEAHKRAEEFLTASQEAL" FT CDS complement(join(43005426..43005749,43006005..43006210, FT 43006304..43006430,43006580..43006725,43007894..43008164, FT 43008268..43008484,43008653..43008813,43010540..43010722, FT 43010812..43010918,43011186..43011368,43012490..43012623, FT 43012965..43013140,43013325..43013420,43013724..43013829, FT 43013974..43014145,43014249..43014339,43014618..43014845, FT AL355385.15:219..324,AL355385.15:403..640, FT AL355385.15:1478..1733,AL355385.15:2034..2230, FT AL355385.15:2331..2469,AL355385.15:3039..3539, FT AL355385.15:3683..3834,AL355385.15:4280..4859)) FT /gene="CUL7" FT /locus_tag="RP1-20C7.5-001" FT /standard_name="OTTHUMP00000016418" FT /product="cullin 7" FT /note="match: proteins: Sw:Q14999 Sw:Q8IWT3 Sw:Q8VE73" FT /protein_id="CAI19793.1" FT /translation="MVGELRYREFRVPLGPGLHAYPDELIRQRVGHDGHPEYQIRWLIL FT RRGDEGDGGSGQVDCKAEHILLWMSKDEIYANCHKMLGEDGQVIGPSQESAGEVGALDK FT SVLEEMETDVKSLIQRALRQLEECVGTIPPAPLLHTVHVLSAYASIEPLTGVFKDPRVL FT DLLMHMLSSPDYQIRWSAGRMIQALSSHDAGTRTQILLSLSQQEAIEKHLDFDSRCALL FT ALFAQATLSEHPMSFEGIQLPQVPGRVLFSLVKRYLHVTSLLDQLNDSAAEPGAQNTSA FT PEELSGERGQLELEFSMAMGTLISELVQAMRWDQASDRPRSSARSPGSIFQPQLADVSP FT GLPAAQAQPSFRRSRRFRPRSEFASGNTYALYVRDTLQPGMRVRMLDDYEEISAGDEGE FT FRQSNNGVPPVQVFWESTGRTYWVHWHMLEILGFEEDIEDMVEADEYQGAVASRVLGRA FT LPAWRWRPMTELYAVPYVLPEDEDTEECEHLTLAEWWELLFFIKKLDGPDHQEVLQILQ FT ENLDGEILDDEILAELAVPIELAQDLLLTLPQRLNDSALRDLINCHVYKKYGPEALAGN FT QAYPSLLEAQEDVLLLDAQAQAKDSEDAAKVEAKEPPSQSPNTPLQRLVEGYGPAGKIL FT LDLEQALSSEGTQENKVKPLLLQLQRQPQPFLALMQSLDTPETNRTLHLTVLRILKQLV FT DFPEALLLPWHEAVDACMACLRSPNTDREVLQELIFFLHRLTSVSRDYAVVLNQLGARD FT AISKALEKHLGKLELAQELRDMVFKCEKHAHLYRKLITNILGGCIQMVLGQIEDHRRTH FT QPINIPFFDVFLRYLCQGSSVEVKEDKCWEKVEVSSNPHRASKLTDHNPKTYWESNGSA FT GSHYITLHMRRGILIRQLTLLVASEDSSYMPARVVVCGGDSTSSLHTELNSVNVMPSAS FT RVILLENLTRFWPIIQIRIKRCQQGGIDTRIRGLEILGPKPTFWPVFREQLCRHTRLFY FT MVRAQAWSQDMAEDRRSLLHLSSRLNGALRQEQNFADRFLPDDEAAQALGKTCWEALVS FT PVVQNITSPDEDGISPLGWLLDQYLECQEAVFNPQSRGPAFFSRVRRLTHLLVHVEPCE FT APPPVVATPRPKGRNRSHDWSSLATRGLPSSIMRNLTRCWRAVVEKQVNNFLTSSWRDD FT DFVPRYCEHFNILQNSSSELFGPRAAFLLALQNGCAGALLKLPFLKAAHVSEQFARHID FT QQIQGSRIGGAQEMERLAQLQQCLQAVLIFSGLEIATTFEHYYQHYMADRLLGVVSSWL FT EGAVLEQIGPCFPNRLPQQMLQSLSTSKELQRQFHVYQLQQLDQELLKLEDTEKKIQVG FT LGASGKEHKSEKEEEAGAAAVVDVAEGEEEEEENEDLYYEGAMPEVSVLVLSRHSWPVA FT SICHTLNPRTCLPSYLRGTLNRYSNFYNKSQSHPALERGSQRRLQWTWLGWAELQFGNQ FT TLHVSTVQMWLLLYLNDLKAVSVESLLAFSGLSADMLNQAIGPLTSSRGPLDLHEQKDI FT PGGVLKIRDGSKEPRSRWDIVRLIPPQTYLQAEGEDGQNLEKRRNLLNCLIVRILKAHG FT DEGLHIDQLVCLVLEAWQKGPCPPRGLVSSLGKGSACSSTDVLSCILHLLGKGTLRRHD FT DRPQVLSYAVPVTVMEPHTESLNPGSSGPNPPLTFHTLQIRSRGVPYASCTATQSFSTF FT R" FT misc_feature 42955396 FT /note="Clone_right_end: RP1-125M3" FT mRNA complement(join(43005355..43005749,43006005..43006210, FT 43006304..43006430,43006580..43006725,43007894..43008164, FT 43008268..43008484,43008653..43008813,43010540..43010722, FT 43010812..43010918,43011186..43011368,43012490..43012623, FT 43012965..43013140,43013325..43013420,43013724..43013829, FT 43013974..43014145,43014249..43014339,43014618..43014845, FT AL355385.15:219..324,AL355385.15:403..640, FT AL355385.15:1478..1733,AL355385.15:2034..2230, FT AL355385.15:2331..2469,AL355385.15:3039..3539, FT AL355385.15:3683..3834,AL355385.15:4280..4867, FT AL355385.15:5693..5770)) FT /gene="CUL7" FT /locus_tag="RP1-20C7.5-001" FT /product="cullin 7" FT /note="match: ESTs: Em:AA928732 Em:AA937512 Em:AI081979 FT Em:AI091883 Em:AI193163 Em:AI287919 Em:AI313491 Em:AI348130 FT Em:AI653477 Em:AI814265 Em:AI912395 Em:AI936675 Em:AW106876 FT Em:AW656222 Em:BB632935 Em:BE031560 Em:BE272196 Em:BE396680 FT Em:BE484438 Em:BE560863 Em:BE731279 Em:BE758282 Em:BF184045 FT Em:BF184299 Em:BG032837 Em:BG244961 Em:BG251229 Em:BG327910 FT Em:BG384869 Em:BG423725 Em:BG424177 Em:BG519493 Em:BG763385 FT Em:BI227003 Em:BI538879 Em:BI856485 Em:BI856703 Em:BM043907 FT Em:BM051495 Em:BM449991 Em:R98569 Em:W55983 Em:W90081" FT /note="match: cDNAs: Em:AB014608.1 Em:D38548.1" FT polyA_site complement(42979832) FT polyA_signal complement(42979847..42979852) FT polyA_signal complement(42979988..42979993) FT polyA_site complement(42979992) FT polyA_signal 42980060..42980065 FT polyA_site 42980076 FT mRNA complement(join(42979832..42980359,42980664..42980766, FT 42980853..42981127,42981524..42981706)) FT /gene="MEA1" FT /locus_tag="RP1-20C7.1-001" FT /product="male-enhanced antigen 1" FT /note="match: ESTs: Em:BM969076.1 Em:BM970253.1 FT Em:BU630642.1 Em:CA311478.1 Em:CN305526.1" FT /note="match: cDNAs: Em:BC001754.1 Em:BT009831.1 FT Em:L10400.1 Em:M27937.1" FT CDS complement(join(42980208..42980359,42980664..42980766, FT 42980853..42981127,42981524..42981551)) FT /gene="MEA1" FT /locus_tag="RP1-20C7.1-001" FT /standard_name="OTTHUMP00000016417" FT /product="male-enhanced antigen 1" FT /protein_id="CAI19794.2" FT /translation="MGPERHLSGAPARMATVVLGGDTMGPERIFPNQTEELGHQGPSEG FT TGDWSSEEPEEEQEETGSGPAGYSYQPLNQDPEQEEVELAPVGDGDVVADIQDRIQALG FT LHLPDPPLESEDEDEEGATALNNHSSIPMDPEHVELVKRTMAGVSLPAPGVPAWAREIS FT DAQWEDVVQKALQARQASPAWK" FT mRNA join(42981951..42982086,42984872..42985084, FT 42985257..42985433,42985591..42985706,42985883..42985954, FT 42986081..42986294,42986371..42986457,42986601..42986709, FT 42986830..42986903,42987026..42987104,42988405..42989036) FT /gene="RP1-20C7.3" FT /locus_tag="RP1-20C7.3-001" FT /note="match: ESTs: Em:AL519861 Em:AL537653 Em:AL553717 FT Em:AL602997 Em:AU122047 Em:AU133760 Em:AU135284 Em:AU135646 FT Em:AU141351 Em:AW246158 Em:AW248344 Em:BB852076 Em:BB858076 FT Em:BE244173 Em:BE905351 Em:BF305900 Em:BF530133 Em:BF973014 FT Em:BF975332 Em:BG115032 Em:BG329718 Em:BG420841 Em:BG470323 FT Em:BG756030 Em:BG826725 Em:BG832329 Em:BG967730 Em:BI115685 FT Em:BI194615 Em:BI464982 Em:BI668488 Em:BI754668 Em:BI760639 FT Em:BI906318 Em:BI915815 Em:BM050097" FT /note="match: cDNAs: Em:AB055925.1 Em:BC000295.1 FT Em:BC001789.1 Em:BC001793.1 Em:BC007296.1 Em:BC009460.1 FT Em:BC012987.1 Em:BC015601.1 Em:X98248.2" FT mRNA join(42981951..42982086,42984172..42984322, FT 42984872..42985084,42985257..42985433,42985591..42985706, FT 42985883..42985954,42986081..42986294,42986371..42986457, FT 42986601..42986709,42986830..42986903,42987026..42987104, FT 42988405..42989036) FT /gene="RP1-20C7.3" FT /locus_tag="RP1-20C7.3-002" FT /note="match: ESTs: Em:AA038375 Em:AA102878 Em:AA821930 FT Em:AI787752 Em:AL360457 Em:AL362083 Em:AU079794 Em:AU079982 FT Em:AU080047 Em:AW211078 Em:AW744271 Em:BB592373 Em:BB602530 FT Em:BB603987 Em:BB605758 Em:BB607854 Em:BB658720 Em:BB842841 FT Em:BB850423 Em:BB858076 Em:BB858305 Em:BE287867 Em:BE290915 FT Em:BF118744 Em:BG963322 Em:BG967730 Em:BG968318 Em:W45777 FT Em:W61956 Em:W71839" FT /note="match: cDNAs: Em:AB053465.1 Em:AJ278127.1 FT Em:AK004964.1" FT CDS join(42984931..42985084,42985257..42985433, FT 42985591..42985706,42985883..42985954,42986081..42986294, FT 42986371..42986457,42986601..42986709,42986830..42986903, FT 42987026..42987104,42988405..42988471) FT /gene="RP1-20C7.3" FT /locus_tag="RP1-20C7.3-001" FT /standard_name="OTTHUMP00000016414" FT /note="match: proteins: Sw:Q8VEM9 Sw:Q9BQ90 Tr:O17718 FT Tr:Q96GH7 Tr:Q9W3D5" FT /protein_id="CAI19796.1" FT /translation="MLRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQID FT VHIFNAVSLRWTKLPPVKSAIRGQAPVVPYMRYGHSTVLIDDTVLLWGGRNDTEGACNV FT LYAFDVNTHKWFTPRVSGTVPGARDGHSACVLGKIMYIFGGYEQQADCFSNDIHKLDTS FT TMTWTLICTKGSPARWRDFHSATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTR FT TEAWLDCPPTPVLPEGRRSHSAFGYNGELYIFGGYNARLNRHFHDLWKFNPVSFTWKKI FT EPKGKGPCPRRRQCCCIVGDKIVLFGGTSPSPEEGLGDEFDLIDHSDLHILDFSPSLKT FT LCKLAVIQYNLDQSCLPHDIRWELNAMTTNSNISRPIVSSHG" FT polyA_signal 42989018..42989023 FT polyA_site 42989036 FT mRNA join(42989383..42989522,42992723..42992870, FT 42993001..42993067,42993775..42993879,42994916..42994990, FT 42995098..42995215,42996830..42997335) FT /locus_tag="RP1-20C7.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:AL561004 Em:BE261098 Em:BE314657 FT Em:BE407929 Em:BE408876 Em:BE410573 Em:BE791541 Em:BE791545 FT Em:BE795307 Em:BE795313 Em:BE884533 Em:BE885573 Em:BF310313 FT Em:BF568459 Em:BG106719 Em:BG491609 Em:BI160664 Em:BI195653 FT Em:BI198151 Em:BI438438 Em:BI520435 Em:BI828671 Em:BI855887 FT Em:BM450918 Em:BM470517 Em:BM473779 Em:BM475327" FT /note="match: cDNAs: Em:AF161371.1 Em:BC006293.1 FT Em:BC011933.1" FT CDS join(42989393..42989522,42992723..42992870, FT 42993001..42993067,42993775..42993879,42994916..42994990, FT 42995098..42995215,42996830..42996966) FT /locus_tag="RP1-20C7.4-001" FT /standard_name="OTTHUMP00000016415" FT /product="novel protein" FT /note="match: proteins: Tr:Q91X71 Tr:Q96EU6 Tr:Q9BRF6 FT Tr:Q9P0C8" FT /protein_id="CAI19798.1" FT /translation="MPGANYRAGAGAGAGARRPRGARDREEDGGGLEPAAVARDLLRGT FT SNMSFEELLELQSQVGTKTYKQLVAGNSPKKQASRPPIQNACVADKHRPLEMSAKIRVP FT FLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFLNDIRAKEKELVKKQLKKHLSGE FT EHEKLQQLLQRMEQQEMAQQERKQQQELHLALKQERRAQAQQGHRPYFLKKSEQRQLAL FT AEKFKELKRSKKLENFLSRKRRRNAGKDRRHLPLSKE" FT polyA_signal 42997315..42997320 FT polyA_site 42997335 FT polyA_site complement(43005355) FT polyA_signal complement(43005374..43005379) FT misc_feature 43015568 FT /note="Clone_left_end: RP11-387M24" FT misc_feature 43015769..43145551 FT /note="annotated region of clone" FT mRNA complement(join(AL136304.10:63169..63264, FT AL136304.10:63568..63673,AL136304.10:63818..63989, FT AL136304.10:64093..64183,AL136304.10:64462..64689, FT AL136304.10:65529..65571,43015886..43015898)) FT /gene="CUL7" FT /locus_tag="RP1-20C7.5-002" FT /product="cullin 7" FT /note="match: ESTs: Em:BG424177.1" FT CDS complement(join(AL136304.10:55270..55593, FT AL136304.10:55849..56054,AL136304.10:56148..56274, FT AL136304.10:56424..56569,AL136304.10:57738..58008, FT AL136304.10:58112..58328,AL136304.10:58497..58657, FT AL136304.10:60384..60566,AL136304.10:60656..60762, FT AL136304.10:61030..61212,AL136304.10:62334..62467, FT AL136304.10:62809..62984,AL136304.10:63169..63264, FT AL136304.10:63568..63673,AL136304.10:63818..63989, FT AL136304.10:64093..64183,AL136304.10:64462..64689, FT 43015886..43015991,43016070..43016307,43017145..43017400, FT 43017701..43017897,43017998..43018136,43018706..43019206, FT 43019350..43019501,43019947..43020526)) FT /gene="CUL7" FT /locus_tag="RP1-20C7.5-001" FT /standard_name="OTTHUMP00000016418" FT /product="cullin 7" FT /note="match: proteins: Sw:Q14999 Sw:Q8IWT3 Sw:Q8VE73" FT /protein_id="CAI13779.1" FT /translation="MVGELRYREFRVPLGPGLHAYPDELIRQRVGHDGHPEYQIRWLIL FT RRGDEGDGGSGQVDCKAEHILLWMSKDEIYANCHKMLGEDGQVIGPSQESAGEVGALDK FT SVLEEMETDVKSLIQRALRQLEECVGTIPPAPLLHTVHVLSAYASIEPLTGVFKDPRVL FT DLLMHMLSSPDYQIRWSAGRMIQALSSHDAGTRTQILLSLSQQEAIEKHLDFDSRCALL FT ALFAQATLSEHPMSFEGIQLPQVPGRVLFSLVKRYLHVTSLLDQLNDSAAEPGAQNTSA FT PEELSGERGQLELEFSMAMGTLISELVQAMRWDQASDRPRSSARSPGSIFQPQLADVSP FT GLPAAQAQPSFRRSRRFRPRSEFASGNTYALYVRDTLQPGMRVRMLDDYEEISAGDEGE FT FRQSNNGVPPVQVFWESTGRTYWVHWHMLEILGFEEDIEDMVEADEYQGAVASRVLGRA FT LPAWRWRPMTELYAVPYVLPEDEDTEECEHLTLAEWWELLFFIKKLDGPDHQEVLQILQ FT ENLDGEILDDEILAELAVPIELAQDLLLTLPQRLNDSALRDLINCHVYKKYGPEALAGN FT QAYPSLLEAQEDVLLLDAQAQAKDSEDAAKVEAKEPPSQSPNTPLQRLVEGYGPAGKIL FT LDLEQALSSEGTQENKVKPLLLQLQRQPQPFLALMQSLDTPETNRTLHLTVLRILKQLV FT DFPEALLLPWHEAVDACMACLRSPNTDREVLQELIFFLHRLTSVSRDYAVVLNQLGARD FT AISKALEKHLGKLELAQELRDMVFKCEKHAHLYRKLITNILGGCIQMVLGQIEDHRRTH FT QPINIPFFDVFLRYLCQGSSVEVKEDKCWEKVEVSSNPHRASKLTDHNPKTYWESNGSA FT GSHYITLHMRRGILIRQLTLLVASEDSSYMPARVVVCGGDSTSSLHTELNSVNVMPSAS FT RVILLENLTRFWPIIQIRIKRCQQGGIDTRIRGLEILGPKPTFWPVFREQLCRHTRLFY FT MVRAQAWSQDMAEDRRSLLHLSSRLNGALRQEQNFADRFLPDDEAAQALGKTCWEALVS FT PVVQNITSPDEDGISPLGWLLDQYLECQEAVFNPQSRGPAFFSRVRRLTHLLVHVEPCE FT APPPVVATPRPKGRNRSHDWSSLATRGLPSSIMRNLTRCWRAVVEKQVNNFLTSSWRDD FT DFVPRYCEHFNILQNSSSELFGPRAAFLLALQNGCAGALLKLPFLKAAHVSEQFARHID FT QQIQGSRIGGAQEMERLAQLQQCLQAVLIFSGLEIATTFEHYYQHYMADRLLGVVSSWL FT EGAVLEQIGPCFPNRLPQQMLQSLSTSKELQRQFHVYQLQQLDQELLKLEDTEKKIQVG FT LGASGKEHKSEKEEEAGAAAVVDVAEGEEEEEENEDLYYEGAMPEVSVLVLSRHSWPVA FT SICHTLNPRTCLPSYLRGTLNRYSNFYNKSQSHPALERGSQRRLQWTWLGWAELQFGNQ FT TLHVSTVQMWLLLYLNDLKAVSVESLLAFSGLSADMLNQAIGPLTSSRGPLDLHEQKDI FT PGGVLKIRDGSKEPRSRWDIVRLIPPQTYLQAEGEDGQNLEKRRNLLNCLIVRILKAHG FT DEGLHIDQLVCLVLEAWQKGPCPPRGLVSSLGKGSACSSTDVLSCILHLLGKGTLRRHD FT DRPQVLSYAVPVTVMEPHTESLNPGSSGPNPPLTFHTLQIRSRGVPYASCTATQSFSTF FT R" FT mRNA complement(join(AL136304.10:55199..55593, FT AL136304.10:55849..56054,AL136304.10:56148..56274, FT AL136304.10:56424..56569,AL136304.10:57738..58008, FT AL136304.10:58112..58328,AL136304.10:58497..58657, FT AL136304.10:60384..60566,AL136304.10:60656..60762, FT AL136304.10:61030..61212,AL136304.10:62334..62467, FT AL136304.10:62809..62984,AL136304.10:63169..63264, FT AL136304.10:63568..63673,AL136304.10:63818..63989, FT AL136304.10:64093..64183,AL136304.10:64462..64689, FT 43015886..43015991,43016070..43016307,43017145..43017400, FT 43017701..43017897,43017998..43018136,43018706..43019206, FT 43019350..43019501,43019947..43020534,43021360..43021437)) FT /gene="CUL7" FT /locus_tag="RP1-20C7.5-001" FT /product="cullin 7" FT /note="match: ESTs: Em:AA928732 Em:AA937512 Em:AI081979 FT Em:AI091883 Em:AI193163 Em:AI287919 Em:AI313491 Em:AI348130 FT Em:AI653477 Em:AI814265 Em:AI912395 Em:AI936675 Em:AW106876 FT Em:AW656222 Em:BB632935 Em:BE031560 Em:BE272196 Em:BE396680 FT Em:BE484438 Em:BE560863 Em:BE731279 Em:BE758282 Em:BF184045 FT Em:BF184299 Em:BG032837 Em:BG244961 Em:BG251229 Em:BG327910 FT Em:BG384869 Em:BG423725 Em:BG424177 Em:BG519493 Em:BG763385 FT Em:BI227003 Em:BI538879 Em:BI856485 Em:BI856703 Em:BM043907 FT Em:BM051495 Em:BM449991 Em:R98569 Em:W55983 Em:W90081" FT /note="match: cDNAs: Em:AB014608.1 Em:D38548.1" FT polyA_site complement(43021767) FT polyA_signal complement(43021781..43021786) FT mRNA complement(join(43021767..43022224,43023283..43023356, FT 43023635..43023745,43023819..43023929,43024049..43024183, FT 43025803..43025971,43027024..43027157)) FT /locus_tag="RP11-387M24.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA229418 Em:AA397659 Em:AA399031 FT Em:AA479739 Em:AA513729 Em:AA542368 Em:AA628725 Em:AA848264 FT Em:AA852988 Em:AA856738 Em:AA900457 Em:AI009332 Em:AI028306 FT Em:AI032922 Em:AI038157 Em:AI167786 Em:AI171870 Em:AI185677 FT Em:AI313184 Em:AI322563 Em:AI369442 Em:AI564387 Em:AI660416 FT Em:AI744406 Em:AL529791 Em:AW026665 Em:AW142148 Em:AW162156 FT Em:AW252303 Em:AW520892 Em:AW524999 Em:AW732832 Em:AW914523 FT Em:AW987350 Em:BB742659 Em:BE734680 Em:BE758101 Em:BE853270 FT Em:BF020860 Em:BF021355 Em:BF126037 Em:BF233899 Em:BF464274 FT Em:BF464281 Em:BF529017 Em:BF548508 Em:BF559515 Em:BF721516 FT Em:BF721922 Em:BF745584 Em:BF944154 Em:BG065663 Em:BG078937 FT Em:BG116005 Em:BG252437 Em:BG374816 Em:BG379697 Em:BG929353 FT Em:BI280827 Em:BI335423 Em:BI409078 Em:BI413673 Em:BI415086 FT Em:BI526728 Em:BI688993 Em:BI904952 Em:BM256699 Em:BM386544 FT Em:BM458798 Em:BM474838 Em:C76397 Em:C76398 Em:H35542" FT /note="match: cDNAs: Em:AF132956.1 Em:AK007672.1 FT Em:AK009521.1 Em:BC013685.1" FT CDS complement(join(43022012..43022224,43023283..43023356, FT 43023635..43023745,43023819..43023929,43024049..43024183, FT 43025803..43025971,43027024..43027119)) FT /locus_tag="RP11-387M24.2-001" FT /standard_name="OTTHUMP00000016419" FT /product="novel protein" FT /note="match: proteins: Tr:Q8WUL1 Tr:Q9D773 Tr:Q9VTF8 FT Tr:Q9Y311" FT /protein_id="CAI13780.1" FT /translation="MALCALTRALRSLNLAPPTVAAPAPSLFPAAQMMNNGLLQQPSAL FT MLLPCRPVLTSVALNANFVSWKSRTKYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRY FT RMIDFLRFRPEETKSGPFEEKVIQVRYDPSDIALVAGGSRKRWIIATENMQAGDTILNS FT NHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAI FT IQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGR FT KIRPLPPMKSYVKLPSASAQS" FT mRNA join(43027372..43027423,43029049..43029331, FT 43030655..43030885,43033358..43033439,43034044..43034263, FT 43034734..43034821,43038092..43038193,43038430..43038603, FT 43039013..43039112,43039305..43039357,43039590..43039660, FT 43039885..43039993,43040562..43040702,43040961..43041076, FT 43041640..43041703,43042360..43042837) FT /locus_tag="RP11-387M24.3-001" FT /note="match: ESTs: Em:AI929486 Em:AL525074 Em:AL539614 FT Em:AW068436 Em:AW653245 Em:BG491773 Em:BG749449 Em:BI664381 FT Em:BI759931 Em:BI771228 Em:BI826143" FT /note="match: cDNAs: Em:AK056393.1 Em:BC012357.1" FT mRNA join(43027633..43028014,43028256..43028343, FT 43029049..43029331,43030655..43030885,43033358..43033439, FT 43034044..43034263,43034734..43034821,43038092..43038193, FT 43038430..43038603,43039013..43039112,43039305..43039357, FT 43039590..43039660,43039885..43039993,43040562..43040702, FT 43040961..43041076,43041640..43041703,43042360..43042837) FT /locus_tag="RP11-387M24.3-002" FT /note="match: ESTs: Em:AA015415 Em:AA035862 Em:AA100380 FT Em:AA403503 Em:AA980204 Em:AI929486 Em:AL525074 Em:AL539614 FT Em:AL560988 Em:AW068436 Em:AW653245 Em:BB848995 Em:BE250842 FT Em:BE253479 Em:BE257678 Em:BE267307 Em:BE303082 Em:BF530585 FT Em:BF603422 Em:BG006694 Em:BG491773 Em:BG518740 Em:BG749449 FT Em:BG966694 Em:BI143639 Em:BI218672 Em:BI555611 Em:BI664381 FT Em:BI682150 Em:BI759931 Em:BI771228 Em:BI826143 Em:BI870865 FT Em:BM050488 Em:BM087967" FT /note="match: cDNAs: Em:AF055665.1 Em:AF055666.1 FT Em:AF166267.1 Em:AK004774.1 Em:AK055293.1 Em:AK056393.1 FT Em:BC005746.1 Em:BC008881.1 Em:BC012357.1 Em:BC017147.1 FT Em:M75146.1 Em:M75147.1 Em:M75148.1 Em:Y14586.1" FT CDS join(43029074..43029331,43030655..43030885, FT 43033358..43033439,43034044..43034263,43034734..43034821, FT 43038092..43038193,43038430..43038603,43039013..43039112, FT 43039305..43039357,43039590..43039660,43039885..43039993, FT 43040562..43040702,43040961..43041076,43041640..43041703, FT 43042360..43042410) FT /locus_tag="RP11-387M24.3-002" FT /standard_name="OTTHUMP00000016420" FT /note="match: proteins: Sw:O88448 Sw:P37285 Sw:P46822 FT Sw:P46824 Sw:P46825 Sw:Q07866 Sw:Q6P597 Sw:Q91W40 Sw:Q9DBS5 FT Sw:Q9H0B6 Tr:Q21592 Tr:Q91YS4 Tr:Q96EG6 Tr:Q99JQ9" FT /protein_id="CAI13781.1" FT /translation="MSGLVLGQRDEPAGHRLSQEEILGSTRLVSQGLEALRSEHQAVLQ FT SLSQTIECLQQGGHEEGLVHEKARQLRRSMENIELGLSEAQVMLALASHLSTVESEKQK FT LRAQVRRLCQENQWLRDELAGTQQRLQRSEQAVAQLEEEKKHLEFLGQLRQYDEDGHTS FT EEKEGDATKDSLDDLFPNEEEEDPSNGLSRGQGATAAQQGGYEIPARLRTLHNLVIQYA FT AQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALVYRDQNKYKEAAHLLNDALS FT IRESTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTNHPDVAKQL FT NNLALLCQNQGKYEAVERYYQRALAIYEGQLGPDNPNVARTKNNLASCYLKQGKYAEAE FT TLYKEILTRAHVQEFGSVDDDHKPIWMHAEEREEMSKSRHHEGGTPYAEYGGWYKACKV FT SSPTVNTTLRNLGALYRRQGKLEAAETLEECALRSRRQGTDPISQTKVAELLGESDGRR FT TSQEGPGDSVKFEGGEDASVAVEWSGDGSGTLQRSGSLGKIRDVLRRSSELLVRKLQGT FT EPRPSSSNMKRAASLNYLNQPSAAPLQVSRGLSASTMDLSSSS" FT misc_feature 43037508 FT /note="Clone_right_end: RP1-20C7" FT polyA_signal 43042810..43042815 FT polyA_site 43042837 FT CDS join(43044227..43044305,43096715..43097002, FT 43097465..43097567,43097968..43098158,43098249..43098399, FT 43099754..43099902,43100159..43100425,43106587..43106720, FT 43106874..43107009,43107144..43107263,43109406..43109555, FT 43109669..43109819,43109910..43110037,43111155..43111358, FT 43112189..43112344,43112938..43113170,43114356..43114436, FT 43126555..43126706,43127526..43127704,43128459..43128619) FT /gene="PTK7" FT /locus_tag="RP11-387M24.4-001" FT /standard_name="OTTHUMP00000016421" FT /product="PTK7 protein tyrosine kinase 7" FT /note="match: proteins: Sw:Q13308 Sw:Q91048 Tr:O76518" FT /protein_id="CAI13783.1" FT /translation="MGAARGSPARPRRLPLLSVLLLPLLGGTQTAIVFIKQPSSQDALQ FT GRRALLRCEVEAPGPVHVYWLLDGAPVQDTERRFAQGSSLSFAAVDRLQDSGTFQCVAR FT DDVTGEEARSANASFNIKWIEAGPVVLKHPASEAEIQPQTQVTLRCHIDGHPRPTYQWF FT RDGTPLSDGQSNHTVSSKERNLTLRPAGPEHSGLYSCCAHSAFGQACSSQNFTLSIADE FT SFARVVLAPQDVVVARYEEAMFHCQFSAQPPPSLQWLFEDETPITNRSRPPHLRRATVF FT ANGSLLLTQVRPRNAGIYRCIGQGQRGPPIILEATLHLAEIEDMPLFEPRVFTAGSEER FT VTCLPPKGLPEPSVWWEHAGVRLPTHGRVYQKGHELVLANIAESDAGVYTCHAANLAGQ FT RRQDVNITVATVPSWLKKPQDSQLEEGKPGYLDCLTQATPKPTVVWYRNQMLISEDSRF FT EVFKNGTLRINSVEVYDGTWYRCMSSTPAGSIEAQARVQVLEKLKFTPPPQPQQCMEFD FT KEATVPCSATGREKPTIKWERADGSSLPEWVTDNAGTLHFARVTRDDAGNYTCIASNGP FT QGQIRAHVQLTVAVFITFKVEPERTTVYQGHTALLQCEAQGDPKPLIQWKGKDRILDPT FT KLGPRMHIFQNGSLVIHDVAPEDSGRYTCIAGNSCNIKHTEAPLYVVDKPVPEESEGPG FT SPPPYKMIQTIGLSVGAAVAYIIAVLGLMFYCKKRCKAKRLQKQPEGEEPEMECLNGGP FT LQNGQPSAEIQEEVALTSLGSGPAATNKRHSTSDKMHFPRSSLQPITTLGKSEFGEVFL FT AKAQGLEEGVAETLVLVKSLQSKDEQQQLDFRRELEMFGKLNHANVVRLLGLCREAEPH FT YMVLEYVDLGDLKQFLRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKD FT LAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAILEGDFSTKSDV FT WAFGVLMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWALSP FT KDRPSFSEIASALGDSTVDSKP" FT mRNA join(43044227..43044305,43096715..43097002, FT 43097465..43097567,43097968..43098158,43098249..43098399, FT 43099754..43099902,43100159..43100425,43106587..43106720, FT 43106874..43107009,43107144..43107263,43109406..43109555, FT 43109669..43109819,43109910..43110037,43111155..43111358, FT 43112189..43112344,43112938..43113170,43114356..43114436, FT 43126555..43126706,43127526..43127704,43128459..43129457) FT /gene="PTK7" FT /locus_tag="RP11-387M24.4-001" FT /product="PTK7 protein tyrosine kinase 7" FT /note="match: ESTs: Em:AA168307 Em:AI939429 Em:AL515621 FT Em:AL521059 Em:AL527254 Em:AL538801 Em:AU122474 Em:AU134398 FT Em:AU139984 Em:AV595703 Em:AW294000 Em:AW357573 Em:AW409977 FT Em:AW653843 Em:BB609974 Em:BB663145 Em:BE019286 Em:BE672880 FT Em:BE756212 Em:BE778056 Em:BE858312 Em:BF199175 Em:BG470007 FT Em:BG747428 Em:BG829151 Em:BI195534 Em:BI250190 Em:BI696254 FT Em:BM105563 Em:BM152550" FT /note="match: cDNAs: Em:BC002377.1 Em:M63437.1 Em:U33635.1 FT Em:U40271.2" FT polyA_signal 43129432..43129437 FT polyA_site 43129457 FT mRNA join(43139037..43139907,43141585..43141851, FT 43143444..43143705,43144286..43144405,AL133375.25:581..772, FT AL133375.25:1093..1169,AL133375.25:1382..3792) FT /gene="SRF" FT /locus_tag="RP3-330M21.1-001" FT /product="serum response factor (c-fos serum response FT element-binding transcription factor)" FT /note="match: ESTs: Em:AL521878 Em:AL556180 Em:AW045527 FT Em:AW144813 Em:AW354632 Em:AW743375 Em:BE621028 Em:BE721456 FT Em:BE721893 Em:BE727665 Em:BE983692 Em:BE985797 Em:BF462066 FT Em:BF463336 Em:BF714018 Em:BF733797 Em:BF776826 Em:BF897637 FT Em:BG229130 Em:BG276769 Em:BI156128 Em:BI654237 Em:BI851864 FT Em:BM008457 Em:BM032124 Em:BM466280 Em:BM469317" FT /note="match: cDNAs: Em:AJ011112.1 Em:J03161.1 Em:U50596.1 FT Em:X56451.1" FT CDS join(43139395..43139907,43141585..43141851, FT 43143444..43143705,43144286..43144405,AL133375.25:581..772, FT AL133375.25:1093..1169,AL133375.25:1382..1477) FT /gene="SRF" FT /locus_tag="RP3-330M21.1-001" FT /standard_name="OTTHUMP00000016422" FT /product="serum response factor (c-fos serum response FT element-binding transcription factor)" FT /note="match: proteins: Sw:P11831 Sw:P23790 Sw:Q24535 FT Sw:Q90718 Sw:Q9JM73 Tr:O42725 Tr:O62543 Tr:Q9XYR1 FT Tr:Q9YH93" FT /protein_id="CAI13785.1" FT /translation="MLPTQAGAAAALGRGSALGGSLNRTPTGRPGGGGGTRGANGGRVP FT GNGAGLGPGRLEREAAAAAATTPAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSE FT MEIGMVVGGPEASAAATGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSK FT RKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSP FT DSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQT FT APSTSTTMQVSSGPSFPITNYLAPVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLP FT TSFTLMPGGAVAQQVPVQAIQVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSV FT PTTVGGHMMYPSPHAVMYAPTSGLGDGSLTVLNAFSQAPSTMQVSHSQVQEPGGVPQVF FT LTASSGTVQIPVSAVQLHQMAVIGQQAGSSSNLTELQVVNLDTAHSTKSE" FT misc_feature 43145351 FT /note="Clone_left_end: RP3-330M21" FT misc_feature 43145552..43262522 FT /note="annotated region of clone" FT misc_feature 43145689 FT /note="Clone_left_end: RP11-480N24" FT polyA_signal 43149218..43149223 FT polyA_site 43149245 FT mRNA join(43151480..43152643,43153194..43153348, FT 43153693..43154193,43154698..43154833,43154984..43155177, FT 43155451..43155856,43156261..43156453,43160739..43160946, FT 43163807..43164003,43164383..43164600,43166347..43166593, FT 43167004..43167109,43167667..43167894,43168174..43168264, FT 43168401..43168572,43170454..43170559,43170847..43170942, FT 43171155..43171330,43171592..43171725,43172098..43172277, FT 43172486..43172595,43172671..43172853,43173001..43173161, FT 43173745..43173973,43174059..43174248,43180887..43181032, FT 43181176..43181305,43181451..43181650,43182817..43183064, FT 43183896..43184241,43188197..43188337,43188485..43188649, FT 43188896..43189059,43189423..43189516,43190054..43190128, FT 43190269..43190382,43190517..43190634,43191002..43191135, FT 43191833..43191906,43191988..43192324) FT /gene="RP3-330M21.2" FT /locus_tag="RP3-330M21.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA256874 Em:AA481333 Em:AA765225 FT Em:AI651194 Em:AW104593 Em:AW593333 Em:BE731279 Em:BE892134 FT Em:BF195095 Em:BF375485 Em:BG327910 Em:BM128036 FT Em:BM128340" FT /note="match: cDNAs: Em:AB014608.1 Em:BC002879.1 FT Em:D38548.1" FT CDS join(43152049..43152643,43153194..43153348, FT 43153693..43154193,43154698..43154833,43154984..43155177, FT 43155451..43155856,43156261..43156453,43160739..43160946, FT 43163807..43164003,43164383..43164600,43166347..43166593, FT 43167004..43167109,43167667..43167894,43168174..43168264, FT 43168401..43168572,43170454..43170559,43170847..43170942, FT 43171155..43171330,43171592..43171725,43172098..43172277, FT 43172486..43172595,43172671..43172853,43173001..43173161, FT 43173745..43173973,43174059..43174248,43180887..43181032, FT 43181176..43181305,43181451..43181650,43182817..43183064, FT 43183896..43184241,43188197..43188337,43188485..43188649, FT 43188896..43189059,43189423..43189516,43190054..43190128, FT 43190269..43190382,43190517..43190634,43191002..43191135, FT 43191833..43191906,43191988..43192183) FT /gene="RP3-330M21.2" FT /locus_tag="RP3-330M21.2-001" FT /standard_name="OTTHUMP00000016423" FT /product="novel protein" FT /note="match: proteins: Sw:Q14999 Sw:Q8IWT3" FT /protein_id="CAI20204.1" FT /translation="MVGERHAGDLMVPLGPRLQAYPEELIRQRPGHDGHPEYLIRWSVL FT KCGEVGKVGVEEGKAEHILMWLSAPEVYANCPGLLGERALSKGLQHEPAGVSGSFPRDP FT GGLDEVAMGEMEADVQALVRRAARQLAESGTPSLTAAVLHTIHVLSAYASIGPLTGVFR FT ETGALDLLMHMLCNPEPQIRRSAGKMLQALAAHDAGSRAHVLLSLSQQDGIEQHMDFDS FT RYTLLELFAETTSSEEHCMAFEGIHLPQIPGKLLFSLVKRYLCVTSLLDQLNSSPELGA FT GDQSSPCATREKSRGQRELEFSMAVGNLISELVRSMGWARNLSEQGMSPPRPTRSIFQP FT YISGPSLLLPTIVTTPRRQGWVFRQRSEFSSRSGYGEYVQQTLQPGMRVRMLDDYEEIS FT AGDEGEFRQSNNGIPPVQVFWQSTGRTYWVHWHMLEILGPEEATEDKASAAVEKGAGAT FT VLGTAFPSWDWNPMDGLYPLPYLQPEPQKNERVGYLTQAEWWELLFFIKKLDLCEQQPI FT FQNLWKNLDETLGEKALGEISVSVEMAESLLQVLSSRFEGSTLNDLLNSQIYTKYGLLS FT NEPSSSSTSRNHSCTPDPEEESKSEASFSEEETESLKAKAEAPKTEAEPTKTRTETPMA FT QSDSQLFNQLLVTEGMTLPTEMKEAASEMARALRGPGPRSSLDQHVAAVVATVQISSLD FT TNLQLSGLSALSQAVEEVTERDHPLVRPDRSLREKLVKMLVELLTNQVGEKMVVVQALR FT LLYLLMTKHEWRPLFAREGGIYAVLVCMQEYKTSVLVQQAGLAALKMLAVASSSEIPTF FT VTGRDSIHSLFDAQMTREIFASIDSATRPGSESLLLTVPAAVILMLNTEGCSSAARNGL FT LLLNLLLCNHHTLGDQIITQELRDTLFRHSGIAPRTEPMPTTRTILMMLLNRYSEPPGS FT PERAALETPIIQGQDGSPELLIRSLVGGPSAELLLDLERVLCREGSPGGAVRPLLKRLQ FT QETQPFLLLLRTLDAPGPNKTLLLSVLRVITRLLDFPEAMVLPWHEVLEPCLNCLSGPS FT SDSEIVQELTCFLHRLASMHKDYAVVLCCLGAKEILSKVLDKHSAQLLLGCELRDLVTE FT CEKYAQLYSNLTSSILAGCIQMVLGQIEDHRRTHQPINIPFFDVFLRHLCQGSSVEVKE FT DKCWEKVEVSSNPHRASKLTDHNPKTYWESNGSTGSHYITLHMHRGVLVRQLTLLVASE FT DSSYMPARVVVFGGDSTSCIGTELNTVNVMPSASRVILLENLNRFWPIIQIRIKRCQQG FT GIDTRVRGVEVLGPKPTFWPLFREQLCRRTCLFYTIRAQAWSRDIAEDHRRLLQLCPRL FT NRVLRHEQNFADRFLPDDEAAQALGKTCWEALVSPLVQNITSPDAEGVSALGWLLDQYL FT EQRETSRNPLSRAASFASRVRRLCHLLVHVEPPPGPSPEPSTRPFSKNSKGRDRSPAPS FT PVLPSSSLRNITQCWLSVVQEQVSRFLAAAWRAPDFVPRYCKLYEHLQRAGSELFGPRA FT AFMLALRSGFSGALLQQSFLTAAHMSEQFARYIDQQIQGGLIGGAPGVEMLGQLQRHLE FT PIMVLSGLELATTFEHFYQHYMADRLLSFGSSWLEGAVLEQIGLCFPNRLPQLMLQSLS FT TSEELQRQFHLFQLQRLDKLFLEQEDEEEKRLEEEEEEEEEEEAEKELFIEDPSPAISI FT LVLSPRCWPVSPLCYLYHPRKCLPTEFCDALDRFSSFYSQSQNHPVLDMGPHRRLQWTW FT LGRAELQFGKQILHVSTVQMWLLLKFNQTEEVSVETLLKDSDLSPELLLQALVPLTSGN FT GPLTLHEGQDFPHGGVLRLHEPGPQRSGEALWLIPPQAYLNVEKDEGRTLEQKRNLLSC FT LLVRILKAHGEKGLHIDQLVCLVLEAWQKGPNPPGTLGHTVAGGVACTSTDVLSCILHL FT LGQGYVKRRDDRPQILMYAAPEPMGPCRGQADVPFCGSQSETSKPSPEAVATLASLQLP FT AGRTMSPQEVEGLMKQTVRQVQETLNLEPDVAQHLLAHSHWGAEQLLQSYSEDPEPLLL FT AAGLCVHQAQAVPVRPDHCPVCVSPLGCDDDLPSLCCMHYCCKSCWNEYLTTRIEQNLV FT LNCTCPIADCPAQPTGAFIRAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRI FT LCRQGLGCGTTCSKCGWASCFNCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHL FT AKLISKRCPSCQAPIEKNEGCLHMTCAKCNHGFCWRCLKSWKPNHKDYYNCSAMVSKAA FT RQEKRFQDYNERCTFHHQAREFAVNLRNRVSAIHEVPPPRSFTFLNDACQGLEQARKVV FT LAYACVYSFYSQDAEYMDVVEQQTENLELHTNALQILLEETLLRCRDLASSLRLLRADC FT LSTGMELLRRIQERLLAILQHSAQDFRVGLQSPSVEAWEAKGPNMPGSQPQASSGPEAE FT EEEEDDEDDVPEWQQDEFDEELDNDSFSYDESENLDQETFFFGDEEEDEDEAYD" FT misc_feature 43187102 FT /note="Clone_right_end: RP11-387M24" FT polyA_signal 43192301..43192306 FT polyA_site 43192324 FT polyA_site complement(43193367) FT polyA_signal complement(43193392..43193397) FT mRNA complement(join(43193367..43193619,43193771..43193881, FT 43194065..43194133,43196999..43197210)) FT /gene="RP3-330M21.3" FT /locus_tag="RP3-330M21.3-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA314444 Em:AA725339 Em:AI127880 FT Em:AI144340 Em:AV747040 Em:AW051519 Em:AW605441 Em:AW605502 FT Em:AW952849 Em:AW973317 Em:BE253727 Em:BE262607 Em:BE263489 FT Em:BE396239 Em:BE410940 Em:BF314642 Em:BF436697 Em:BF589199 FT Em:BG281924 Em:BG425065 Em:BG480697 Em:BG482538 Em:BG708497 FT Em:BG980202 Em:BG980321 Em:BI014199 Em:BI014203 Em:BI014208 FT Em:BI014239 Em:BI193988 Em:BI546705 Em:BM042391 Em:BM044404 FT Em:BM048720 Em:W88894" FT /note="match: cDNAs: Em:AF040105.1 Em:BC011683.1 FT Em:U82591.1" FT CDS complement(join(43193471..43193619,43193771..43193881, FT 43194065..43194133,43196999..43197194)) FT /gene="RP3-330M21.3" FT /locus_tag="RP3-330M21.3-001" FT /standard_name="OTTHUMP00000016424" FT /product="novel protein" FT /note="match: proteins: Sw:O35820 Sw:O43598" FT /protein_id="CAI20205.1" FT /translation="MAAAMVPGRSESWERGEPGRPALYFCGSIRGGREDRTLYERIVSR FT LRRFGTVLTEHVAAAELGARGEEAAGGDRLIHEQDLEWLQQADVVVAEVTQPSLGVGYE FT LGRAVAFNKRILCLFRPQSGRVLSAMIRGAADGSRFQVWDYEEGEVEALLDRYFEADPP FT GQVAASPDPTT" FT mRNA join(43211418..43211446,43214345..43214506, FT 43220477..43220624,43221029..43221102,43221306..43221446, FT 43222285..43222389,43222787..43222852,43223290..43223382, FT 43223469..43223594,43225550..43225704,43226776..43227007, FT 43227269..43227444,43230527..43231088,43250465..43252050, FT 43252721..43255997) FT /gene="TTBK1" FT /locus_tag="RP3-330M21.4-001" FT /product="tau tubulin kinase 1" FT /note="match: ESTs: Em:AW016334.1 Em:H04790.1" FT /note="match: cDNAs: Em:AB218664.1" FT CDS join(43214399..43214506,43220477..43220624, FT 43221029..43221102,43221306..43221446,43222285..43222389, FT 43222787..43222852,43223290..43223382,43223469..43223594, FT 43225550..43225704,43226776..43227007,43227269..43227444, FT 43230527..43231088,43250465..43252050,43252721..43253114) FT /gene="TTBK1" FT /locus_tag="RP3-330M21.4-001" FT /standard_name="OTTHUMP00000016425" FT /product="tau tubulin kinase 1" FT /note="match: proteins: Sw:Q5TCY1.2" FT /protein_id="CAI20206.2" FT /translation="MQCLAAALKDETNMSGGGEQADILPANYVVKDRWKVLKKIGGGGF FT GEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNEKFNY FT VVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVGFLHRDIKPSNFAMG FT RLPSTYRKCYMLDFGLARQYTNTTGDVRPPRNVAGFRGTVRYASVNAHKNREMGRHDDL FT WSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEHRMLLKHMPSEFHLFLDHIASLDYF FT TKPDYQLIMSVFENSMKERGIAENEAFDWEKAGTDALLSTSTSTPPQQNTRQTAAMFGV FT VNVTPVPGDLLRENTEDVLQGEHLSDQENAPPILPGRPSEGLGPSPHLVPHPGGPEAEV FT WEETDVNRNKLRINIGKSPCVEEEQSRGMGVPSSPVRAPPDSPTTPVRSLRYRRVNSPE FT SERLSTADGRVELPERRSRMDLPGSPSRQACSSQPAQMLSVDTGHADRQASGRMDVSAS FT VEQEALSNAFRSVPLAEEEDFDSKEWVIIDKETELKDFPPGAEPSTSGTTDEEPEELRP FT LPEEGEERRRLGAEPTVRPRGRSMQALAEEDLQHLPPQPLPPQLSQGDGRSETSQPPTP FT GSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLPRAVPLSLPYQDFKRDLSD FT YRERARLLNRVRRVGFSHMLLTTPQVPLAPVQPQANGKEEEEEEEEDEEEEEEDEEEEE FT EEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGSERSTDRSQEGAPSTLLADD FT QKESRGRASMADGDLEPEEGSKTLVLVSPGDMKKSPVTAELAPDPDLGTLAALTPQHER FT PQPTGSQLDVSEPGTLSSVLKSEPKPPGPGAGLGAGTVTTGVGGVAVTSSPFTKVERTF FT VHIAEKTHLNVMSSGGQALRSEEFSAGGELGLELASDGGAVEEGARAPLENGLALSGLN FT GAEIEGSALSGAPRETPSEMATNSLPNGPALADGPAPVSPLEPSPEKVATISPRRHAMP FT GSRPRSRIPVLLSEEDTGSEPSGSLSAKERWSKRARPQQDLARLVMEKRQGRLLLRLAS FT GASSSSSEEQRRASETLSGTGSEEDTPASEPAAALPRKSGRAAATRSRIPRPIGLRMPM FT PVAAQQPASRSHGAAPALDTAITSRLQLQTPPGSATAADLRPKQPPGRGLGPGRAQAGA FT RPPAPRSPRLPASTSAARNASASPRSQSLSRRESPSPSHQARPGVPPPRGVPPARAQPD FT GTPSPGGSKKGPRGKLQAQRATTKGRAGGAEGRAGAR" FT mRNA join(43215727..43215843,43220477..43220624, FT 43221029..43221102,43221306..43221446,43222285..43222389, FT 43222787..43222852,43223290..43223382,43223469..43223594, FT 43225550..43225704,43226776..43227007,43227269..43227444, FT 43230527..43230872,43231013..43231088,43237381..43237834) FT /gene="TTBK1" FT /locus_tag="RP3-330M21.4-002" FT /product="tau tubulin kinase 1" FT CDS join(43220522..43220624,43221029..43221102, FT 43221306..43221446,43222285..43222389,43222787..43222852, FT 43223290..43223382,43223469..43223594,43225550..43225704, FT 43226776..43227007,43227269..43227444,43230527..43230872, FT 43231013..43231088,43237381..43237553) FT /gene="TTBK1" FT /locus_tag="RP3-330M21.4-002" FT /standard_name="OTTHUMP00000180668" FT /product="tau tubulin kinase 1" FT /protein_id="CAM28234.1" FT /translation="MDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGC FT GRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVGFLHRDI FT KPSNFAMGRLPSTYRKCYMLDFGLARQYTNTTGDVRPPRNVAGFRGTVRYASVNAHKNR FT EMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEHRMLLKHMPSEFHLFLD FT HIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDWEKAGTDALLSTSTSTPPQQNTR FT QTAAMFGVVNVTPVPGDLLRENTEDVLQGEHLSDQENAPPILPGRPSEGLGPSPHLVPH FT PGGPEAEVWEETDVNRNKLRINIGKSPCVEEEQSRGMGVPSSPVRAPPDSPTTPVRSLR FT YRRVNSPESERLSTADGRVELPERRSRMDLPGSPSRQACSSQPAQMLSVDTGHADRQAS FT GRMDVSASVEQEALSNAFRSVPLAEEEDFDSKEWVIIDKETELKDFPPGAEPSTSGTTD FT EEPEELRPLPEEGEERRRLGAEPFPLTPALGTPPSTERVGPHRPTETVGGGQTLGALPP FT AVQPPATTGVLRVLLLHAGDGALPSPRRRRLLGLLRFPHSAQPLG" FT misc_feature 43224084..43224096 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT polyA_signal 43255975..43255980 FT polyA_site 43255996 FT misc_feature 43262422 FT /note="Clone_right_end: RP3-330M21" FT mRNA join(AL355385.15:123370..124240,AL355385.15:125918..126184, FT AL355385.15:127777..128038,AL355385.15:128619..128738, FT 43146032..43146223,43146544..43146620,43146833..43149243) FT /gene="SRF" FT /locus_tag="RP3-330M21.1-001" FT /product="serum response factor (c-fos serum response FT element-binding transcription factor)" FT /note="match: ESTs: Em:AL521878 Em:AL556180 Em:AW045527 FT Em:AW144813 Em:AW354632 Em:AW743375 Em:BE621028 Em:BE721456 FT Em:BE721893 Em:BE727665 Em:BE983692 Em:BE985797 Em:BF462066 FT Em:BF463336 Em:BF714018 Em:BF733797 Em:BF776826 Em:BF897637 FT Em:BG229130 Em:BG276769 Em:BI156128 Em:BI654237 Em:BI851864 FT Em:BM008457 Em:BM032124 Em:BM466280 Em:BM469317" FT /note="match: cDNAs: Em:AJ011112.1 Em:J03161.1 Em:U50596.1 FT Em:X56451.1" FT CDS join(AL355385.15:123728..124240,AL355385.15:125918..126184, FT AL355385.15:127777..128038,AL355385.15:128619..128738, FT 43146032..43146223,43146544..43146620,43146833..43146928) FT /gene="SRF" FT /locus_tag="RP3-330M21.1-001" FT /standard_name="OTTHUMP00000016422" FT /product="serum response factor (c-fos serum response FT element-binding transcription factor)" FT /note="match: proteins: Sw:P11831 Sw:P23790 Sw:Q24535 FT Sw:Q90718 Sw:Q9JM73 Tr:O42725 Tr:O62543 Tr:Q9XYR1 FT Tr:Q9YH93" FT /protein_id="CAI20207.1" FT /translation="MLPTQAGAAAALGRGSALGGSLNRTPTGRPGGGGGTRGANGGRVP FT GNGAGLGPGRLEREAAAAAATTPAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSE FT MEIGMVVGGPEASAAATGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSK FT RKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSP FT DSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQT FT APSTSTTMQVSSGPSFPITNYLAPVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLP FT TSFTLMPGGAVAQQVPVQAIQVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSV FT PTTVGGHMMYPSPHAVMYAPTSGLGDGSLTVLNAFSQAPSTMQVSHSQVQEPGGVPQVF FT LTASSGTVQIPVSAVQLHQMAVIGQQAGSSSNLTELQVVNLDTAHSTKSE" FT misc_feature 43262523..43331957 FT /note="annotated region of clone" FT mRNA join(43263432..43263566,43266358..43266489, FT 43266830..43267258) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-009" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:BG430546.1" FT mRNA join(43263529..43263566,43266358..43266489, FT 43266830..43266835,43267128..43267231,43267365..43267528, FT 43267636..43267804,43268873..43268996,43269321..43269430) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-008" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:BM923554.1" FT mRNA join(43265736..43265829,43266358..43266489, FT 43266830..43267012,43267128..43267231,43267365..43267528, FT 43267636..>43267804) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-007" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:BI517857.1" FT mRNA join(43265999..43266489,43266830..43267012, FT 43267128..43267231,43267365..>43267519) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-006" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:AI016020.1 Em:BI761074.1 FT Em:BM923779.1" FT mRNA join(43265999..43266489,43266830..43267231, FT 43267365..43267519,43267636..43267926) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-002" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:AI016020.1 Em:BG432766.1 FT Em:BI761074.1" FT /note="match: cDNAs: Em:BC017963.1" FT mRNA join(43266002..43266489,43267128..43267231, FT 43267365..43267519,43267636..43267804,43268873..43268996, FT 43269321..43269430,43269938..43270152,43270393..43270501, FT 43271776..43271982,43272409..43273276) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-001" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:AA073425.1 Em:AA705161.1 FT Em:AA740656.1 Em:AI654148.1 Em:AW299681.1 Em:AW430355.1 FT Em:BE013304.1 Em:BF197339.1 Em:BF384296.1 Em:BF532981.1 FT Em:BF780965.1 Em:BF783913.1 Em:BF788932.1 Em:BI759340.1 FT Em:BI759441.1 Em:BI763498.1 Em:N53068.1" FT /note="match: cDNAs: Em:BC013474.1 Em:BC024119.1 FT Em:BC026597.1 Em:BC026598.1 Em:L27651.1" FT mRNA join(43266002..43266489,43266830..43266835, FT 43267128..43267231,43267365..43267519,43267636..43267804, FT 43268873..43268996,43269321..43269430,43269938..43270152, FT 43270393..43270501,43271776..43271982,43272409..43273276) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-004" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:AA740656.1 Em:AA777852.1 FT Em:AI654148.1 Em:AI928177.1 Em:AV694131.1 Em:AW299681.1 FT Em:AW430355.1 Em:BE013304.1 Em:BF197339.1 Em:BF509670.1 FT Em:BF780214.1 Em:BI763455.1 Em:N53049.1 Em:T73363.1" FT /note="match: cDNAs: Em:AF097518.1 Em:AY050498.1" FT CDS join(43266097..43266489,43266830..43267012, FT 43267128..43267231,43267365..>43267519) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-006" FT /standard_name="OTTHUMP00000016431" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /protein_id="CAI14461.1" FT /translation="MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVP FT AHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGEL FT EDEPATVPCSQGWEYDHSEFSSTIATESQVGIYIIHLEVECRWRQSPWEAAGRGLPWEE FT AEAAGLGRDKVSYSPSWRESLGGLLSGMEWDLVCEQKGLNRAASTFFFAGVLVGAVAFG FT YLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPL" FT CDS join(43266097..43266489,43267128..43267231, FT 43267365..43267519,43267636..43267804,43268873..43268996, FT 43269321..43269430,43269938..43270152,43270393..43270501, FT 43271776..43272016) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-003" FT /standard_name="OTTHUMP00000016428" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: proteins: Tr:Q9H2W5" FT /protein_id="CAI14462.1" FT /translation="MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVP FT AHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGEL FT EDEPATVPCSQGWEYDHSEFSSTIATEWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYL FT SDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWL FT DVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSLWWVPESAR FT WLLTQGHVKEAHRYLLHCARLNGRPVCEDSFSQEAVSKVAAGERVVRRPSYLDLFRTPR FT LRHISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAG FT RRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTV FT LRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGIALLAAGTALLLPETRQAQ FT LPETIQDVERKRCVHRTVSVYV" FT mRNA join(43266097..43266489,43267128..43267231, FT 43267365..43267519,43267636..43267804,43268873..43268996, FT 43269321..43269430,43269938..43270152,43270393..43270501, FT 43271776..43272218) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-003" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:BF384296.1 Em:BF532981.1 FT Em:BF780965.1 Em:BF783913.1 Em:BF788932.1 Em:BI759340.1 FT Em:BI759441.1 Em:BI763498.1 Em:R29132.1 Em:T73363.1" FT /note="match: cDNAs: Em:AF210455.1" FT CDS join(43266097..43266489,43267128..43267231, FT 43267365..43267519,43267636..43267804,43268873..43268996, FT 43269321..43269430,43269938..43270152,43270393..43270501, FT 43271776..43271982,43272409..43272463) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-001" FT /standard_name="OTTHUMP00000016426" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: proteins: Tr:Q63314 Tr:Q91WU2" FT /protein_id="CAI14464.1" FT /translation="MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVP FT AHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGEL FT EDEPATVPCSQGWEYDHSEFSSTIATEWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYL FT SDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELEWL FT DVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSLWWVPESAR FT WLLTQGHVKEAHRYLLHCARLNGRPVCEDSFSQEAVSKVAAGERVVRRPSYLDLFRTPR FT LRHISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAG FT RRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTV FT LRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGIALLAAGTALLLPETRQAQ FT LPETIQDVERKSAPTSLQEEEMPMKQVQN" FT CDS join(43266097..43266489,43266830..43266835, FT 43267128..43267231,43267365..43267519,43267636..43267804, FT 43268873..43268996,43269321..43269430,43269938..43270152, FT 43270393..43270501,43271776..43271982,43272409..43272463) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-004" FT /standard_name="OTTHUMP00000016429" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: proteins: Tr:Q9Y694" FT /protein_id="CAI14463.1" FT /translation="MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVP FT AHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGEL FT EDEPATVPCSQGWEYDHSEFSSTIATESQWDLVCEQKGLNRAASTFFFAGVLVGAVAFG FT YLSDRFGRRRLLLVAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLELE FT WLDVEHRTVAGVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSLWWVPES FT ARWLLTQGHVKEAHRYLLHCARLNGRPVCEDSFSQEAVSKVAAGERVVRRPSYLDLFRT FT PRLRHISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRY FT AGRRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYP FT TVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGIALLAAGTALLLPETRQ FT AQLPETIQDVERKSAPTSLQEEEMPMKQVQN" FT CDS join(43267007..43267012,43267128..43267231, FT 43267365..43267528,43267636..>43267804) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-007" FT /standard_name="OTTHUMP00000016432" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /protein_id="CAI14465.1" FT /translation="MEWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLL FT VAYVSTLVLGLASAASVSYVMFAITRTLTGSALAGFTIIVMPLGEAELEWLDVEHRTVA FT GVLSSTFWTGGVMLLALVGYLIRDWRWLLLAVTLPCAPGILSL" FT polyA_site 43267926 FT mRNA complement(join(43303808..43308240,43308528..43308646, FT 43309850..43309949,43310414..43310617,43316062..43316363, FT 43320115..43320214,43322402..43323883,43324864..43325503, FT AL590383.6:3073..3221,AL590383.6:6748..7224)) FT /gene="ZNF318" FT /locus_tag="RP11-480N24.9-001" FT /product="zinc finger protein 318" FT /note="match: cDNAs: Em:AF090114.1 Em:AF121141.1 FT Em:AF159455.1 Em:AF227194.1 Em:AK025505.1" FT /note="match: ESTs: Em:AA459329 Em:AI276962 Em:AI521325 FT Em:AI602656 Em:AI628334 Em:AW295844 Em:AW296726 Em:AW457229 FT Em:AW469479 Em:AW500339 Em:AW968890 Em:BE089537 Em:BE950675 FT Em:BF732963 Em:BF822980 Em:BF843886 Em:BI079323 FT Em:BQ057557.1 Em:BQ061309.1" FT CDS complement(join(43304896..43308240,43308528..43308646, FT 43309850..43309949,43310414..43310617,43316062..43316363, FT 43320115..43320214,43322402..43323883,43324864..43325503, FT AL590383.6:3073..3221,AL590383.6:6748..7146)) FT /gene="ZNF318" FT /locus_tag="RP11-480N24.9-001" FT /standard_name="OTTHUMP00000016436" FT /product="zinc finger protein 318" FT /note="match: proteins: Sw:Q5VUA4.1 Sw:Q99PP2" FT /protein_id="CAI14459.2" FT /translation="MYRSSARSSVSSHRPKDDGGGGPRSGRSSGSSSGPARRSSPPPPP FT SGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPSPPRARRGSPSPPRGRRLFPPGPA FT GFRGSSRGESRADYARDGRGDHPGDSGSRRRSPGLCSDSLEKSLRITVGNDHFCVSTPE FT RRRLSDRLGSPVDNLEDMDRDDLTDDSVFTRSSQCSRGLERYISQEEGPLSPFLGQLDE FT DYRTKETFLHRSDYSPHISCHDELLRGTERNREKLKGYSIRSEERSREAKRPRYDDTVK FT INSMGGDHPSFTSGTRNYRQRRRSPSPRFLDPEFRELDLARRKREEEEERSRSLSQELV FT GVDGGGTGCSIPGLSGVLTASEPGYSLHRPEEVSVMPKKSILKKRIEVDIMEPSMQLES FT FSSSTSSSQDHPLYSGHPSLPLSGAIAAFASEIENKGTMVETALKEPQGNLYQWGPLPG FT IPKDNSPLREKFGSFLCHKDNLDLKAEGPERHTDFLLPHERASQDGSGFSRILSMLADS FT TSTQEKRRRSFPDIEDEEKFLYGDEEEDLKAESVPKPLGSSESEVMRQKASSLPSSAPA FT VKLESLEETNPEYAKIHDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSS FT VDRYFSADHCSSVDHRFSADRCSSVDHCFSADRRSSDPHRLESREAHHSNTHSPEVSHP FT HPPSPVDPYLLTKNSPPFLKSDHPVGHISGPEVVGSGFQSSVAVRCMLPSAPSAPIRLP FT HTAALSQFHMPRASQFAAARIPPNYQGPAIPPASFDAYRHYMAYAASRWPMYPTSQPSN FT HPVPEPHRIMPITKQATRSRPNLRVIPTVTPDKPKQKESLRGSIPAAQVPVQVSIPSLI FT RYNPEKISDEKNRASQKQKVIEEREKLKNDREARQKKMYYLRTELERLHKQQGEMLRKK FT RREKDGHKDPLLVEVSRLQDNIMKDIAELRQEAEEAEKKQSELDKVAQILGINIFDKSQ FT KSLSDSREPTEKPGKAEKSKSPEKVSSFSNSSSNKESKVNNEKFRTKSPKPAESPQSAT FT KQLDQPTAAYEYYDAGNHWCKDCNTICGTMFDFFTHMHNKKHTQTLDPYNRPWASKTQS FT EAKQDAIKRTDKITVPAKGSEFLVPISGFYCQLCEEFLGDPISGEQHVKGHQHNEKYKK FT YVDENPLYEERRNLDRQAGLAVVLETERRRQSELKRKLSEKPKEEKKEKKAKAVKEVKE FT DDKVSEKLEDQLSEGRNSPEKAENKRNTGIKLQLKEEVKKESPTSSSFGKFSWKKPEKE FT EEKSSLVTPSISKEEILESSKDKEDGKTEAGKAKPIKIKLSGKTVVAHTSPWMPVVTTS FT TQTKIRPNLPIPSTVLRKSCSATMSKPAPLNTFLSIKSSGTTAKPLPVVKESSADLLLP FT PDIISKAFGGEEVILKGSPEEKVVLAEKSEPSHLPEQILPPPPPPPPPPPPPPPVIPHP FT AAPSAAQANAILAPVKSNPVVSQTLSPGFVGPNILNPVLPVAIMASAQPAAIPSDETAP FT GVSESDRDQTLFSVLVRPPPPLSSVFSEQAKKLEKRNSCLATANAKDLYDIFYSSGGKG FT APETKGAPETKLSGGPLANGENSNLSRTKSSDTSSTSPLNSSASQEELHQDEGLVAAPI FT VSNSEKPIAKTLVALGKWSVVEHVGPKSTGSTYGFLQPLTRLCQSRPYETITPKTDTLA FT IWTSSSFQSDTSRDISPEKSELDLGEPGPPGVEPPPQLLDIQCKESQKLVEIHLRESVN FT QDKESQELRKSEDCRESEIETNTELKERVKELSEGIVDEGVSTSIGPHSIDDSNLNHGN FT RYMWEGEVKQPNLLMIDKEAEQSNKLMTGSETPSKVVIKLSPQACSFTKAKLDSFLSEA FT RSLLNPQDTPVKISAPELLLHSPARSAMCLTGSPQEQGVSVVSEEGLENSAPESASRTS FT RYRSLKLKRERSKDFQVKKIYELAVWDENKKRPETWESPEKPKTEALELQDVHPELTVT FT IESKALEDFEATDLKVEELTALGNLGDMPVDFCTTRVSPAHRSPTVLCQKVCEENSVSP FT IGCNSSDPADFEPIPSFSGFPLDSPKTLVLDFETEGERNSPNPRSVRIPSPNILKTGLT FT ENVDRGLGGLEGTHQALDLLAGGMMPEEVKESSQLDKQESLGLELKTINSAGLGPSPCL FT PDLVDFVTRTSGVQKDKLCSPLSEPGDPSKCSSLELGPLQLEISNASTTEVAILQVDDD FT SGDPLNLVKAPVSRSPPREQVIEDNMVPQGMPEQETTVGAIQDHTESSVHN" FT mRNA join(43269267..43269430,43269938..43270152, FT 43270393..43270501,43271776..>43271945) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-005" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /note="match: ESTs: Em:AV688939.1 Em:BE666973.1" FT CDS join(43269291..43269430,43269938..43270152, FT 43270393..43270501,43271776..>43271945) FT /gene="SLC22A7" FT /locus_tag="RP11-480N24.7-005" FT /standard_name="OTTHUMP00000016430" FT /product="solute carrier family 22 (organic anion FT transporter), member 7" FT /protein_id="CAI14466.1" FT /translation="MLQPHLLPYQAVSKVAAGERVVRRPSYLDLFRTPRLRHISLCCVV FT VWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLL FT GTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTAYLFTSELYPTVLRQTGMGLTA FT LVGRLGGSLAPLAALLDGVWLSLPKLTYGGIALLAAGTALLLPETRQA" FT polyA_signal 43272197..43272202 FT polyA_site 43272218 FT polyA_signal 43272787..43272792 FT polyA_site 43272806 FT polyA_site complement(43273210) FT polyA_signal complement(43273223..43273228) FT polyA_site complement(43273251) FT polyA_signal 43273254..43273259 FT polyA_signal complement(43273267..43273272) FT polyA_site 43273276 FT mRNA complement(join(43273455..43273613,43273805..43273862, FT 43273957..43274381)) FT /locus_tag="RP11-480N24.2-005" FT /product="novel protein" FT /note="match: ESTs: Em:CN287739.1" FT mRNA complement(join(43273251..43273613,43273957..43274051, FT 43274184..>43274199)) FT /locus_tag="RP11-480N24.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:AA813350.1 Em:AW295882.1" FT CDS complement(join(43273608..43273613,43273957..43274051, FT 43274184..>43274199)) FT /codon_start=1 FT /locus_tag="RP11-480N24.2-002" FT /standard_name="OTTHUMP00000016434" FT /product="novel protein" FT /protein_id="CAI14467.1" FT /translation="EPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEV" FT mRNA complement(join(43273965..43274051,43274184..43274867)) FT /locus_tag="RP11-480N24.2-007" FT /product="novel protein" FT /note="match: ESTs: Em:BX282838.1 Em:CR745315.1" FT mRNA complement(join(43267448..43267554,43273805..43273862, FT 43273957..43274051,43275350..43275481,43275577..>43275614)) FT /locus_tag="RP11-480N24.2-003" FT /product="novel protein" FT /note="match: ESTs: Em:BF087662.1" FT CDS complement(join(43267547..43267554,43273805..43273862, FT 43273957..43274051,43275350..43275481,43275577..>43275614)) FT /codon_start=2 FT /locus_tag="RP11-480N24.2-003" FT /standard_name="OTTHUMP00000016435" FT /product="novel protein" FT /protein_id="CAI14468.1" FT /translation="HKPCYGALFGPRGVNIGGVGSYLYNPPTPSPGCTTPLSPSSFSPP FT RPRTGLPQGKKTEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYGYLF FT GPKAL" FT mRNA complement(join(43275241..43275481,43275577..43275634, FT 43276053..43276526)) FT /locus_tag="RP11-480N24.2-006" FT /product="novel protein" FT /note="match: ESTs: Em:CN264786.1" FT mRNA complement(join(43273210..43273613,43273805..43273862, FT 43273957..43274051,43274184..43274255,43275350..43275481, FT 43275577..43275634,43276053..43276147,43276488..43276535)) FT /locus_tag="RP11-480N24.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA211797.1 Em:AI042209.1 FT Em:AV689723.1 Em:AW655062.1 Em:BB590668.1 Em:N69913.1" FT /note="match: cDNAs: Em:AF367970.1" FT CDS complement(join(43273552..43273613,43273805..43273862, FT 43273957..43274051,43274184..43274255,43275350..43275481, FT 43275577..43275634,43276053..43276147,43276488..43276530)) FT /locus_tag="RP11-480N24.2-001" FT /standard_name="OTTHUMP00000016433" FT /product="novel protein" FT /note="match: proteins: Sw:P36201 Sw:P52943 Sw:Q6Q6R3 FT Sw:Q9DCT8" FT /protein_id="CAI14469.1" FT /translation="MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHA FT EHNGRPYCHKPCYGALFGPRGVNIGGVGSYLYNPPTPSPGCTTPLSPSSFSPPRPRTGL FT PQGKKSPPHMKTFTGETSLCPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSH FT AEHDGVPYCHVPCYGYLFGPKGVNIGDVGCYIYDPVKIKFK" FT mRNA complement(join(43273563..43273862,43273957..43274051, FT 43274184..43274255,43275350..43275481,43275577..43275634, FT 43276053..43276147,43276488..43276535)) FT /locus_tag="RP11-480N24.2-004" FT /product="novel protein" FT /note="match: ESTs: Em:BI489329.1" FT /note="match: cDNAs: Em:AY555742.1 Em:AY555743.1" FT CDS complement(join(43273704..43273862,43273957..43274051, FT 43274184..43274255,43275350..43275481,43275577..43275634, FT 43276053..43276147,43276488..43276530)) FT /locus_tag="RP11-480N24.2-004" FT /standard_name="OTTHUMP00000195154" FT /product="novel protein" FT /note="match: proteins: Sw:Q6Q6R5.2" FT /protein_id="CAM20552.1" FT /translation="MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHA FT EHNGRPYCHKPCYGALFGPRGVNIGGVGSYLYNPPTPSPGCTTPLSPSSFSPPRPRTGL FT PQGKKSPPHMKTFTGETSLCPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSH FT AEHDGVPYCHVPCYGYLFGPKGGQPHPRHWDGMYMPEVWHVHGLWVCVDNFPCG" FT CDS 43277969..43278095 FT /pseudo FT /locus_tag="RP11-480N24.3-001" FT /product="ribosomal protein L12 (RPL12) pseudogene" FT /note="match: proteins: Sw:O75000 Sw:P17079 Sw:P23358 FT Sw:P35979 Sw:P61866 Tr:Q9NBK1 Tr:Q9NFW1" FT CDS 43295872..43296214 FT /pseudo FT /locus_tag="RP11-480N24.4-001" FT /product="ribosomal protein L34 (RPL34) pseudogene" FT /note="match: proteins: Sw:O42846 Sw:P11250 Sw:P40525 FT Sw:P40590 Sw:P41098 Sw:P45842 Sw:P49207 Sw:P87262 Sw:Q29223 FT Sw:Q42351 Sw:Q9LJW6 Tr:Q9VBH8 Tr:Q9VHE5" FT polyA_site complement(43303808) FT polyA_signal complement(43303821..43303826) FT misc_feature 43319856 FT /note="Clone_left_end: RP11-213N20" FT CDS 43331217..43331957 FT /pseudo FT /locus_tag="RP11-480N24.6-001" FT /product="ribosomal protein S2 (RPS2) pseudogene" FT /note="match: proteins: Sw:O18789 Sw:P15880 Sw:P25444 FT Sw:P31009 Sw:P46791 Sw:P49154 Sw:P49688 Tr:O89072 FT Tr:Q9SCM3" FT misc_feature 43331857 FT /note="Clone_right_end: RP11-480N24" FT misc_feature 43331958..43352189 FT /note="annotated region of clone" FT CDS 43331958..43332032 FT /pseudo FT /locus_tag="RP11-213N20.1-001" FT /product="ribosomal protein S2 (RPS2) pseudogene" FT /note="match: proteins: Sw:P15880 Sw:Q90YS3 Tr:O55211 FT Tr:O55212 Tr:O55214 Tr:O55215 Tr:Q93VB8 Tr:Q9DC49 Tr:Q9SCM3 FT Tr:Q9SM07" FT misc_feature 43334953..43335288 FT /note="Single clone region" FT mRNA complement(join(AL583834.6:41386..45818, FT AL583834.6:46106..46224,AL583834.6:47428..47527, FT AL583834.6:47992..48195,AL583834.6:53640..53941, FT AL583834.6:57693..57792,AL583834.6:59980..61461, FT AL583834.6:62442..63081,43333030..43333178, FT 43336705..43337181)) FT /gene="ZNF318" FT /locus_tag="RP11-480N24.9-001" FT /product="zinc finger protein 318" FT /note="match: cDNAs: Em:AF090114.1 Em:AF121141.1 FT Em:AF159455.1 Em:AF227194.1 Em:AK025505.1" FT /note="match: ESTs: Em:AA459329 Em:AI276962 Em:AI521325 FT Em:AI602656 Em:AI628334 Em:AW295844 Em:AW296726 Em:AW457229 FT Em:AW469479 Em:AW500339 Em:AW968890 Em:BE089537 Em:BE950675 FT Em:BF732963 Em:BF822980 Em:BF843886 Em:BI079323 FT Em:BQ057557.1 Em:BQ061309.1" FT CDS complement(join(AL583834.6:42474..45818, FT AL583834.6:46106..46224,AL583834.6:47428..47527, FT AL583834.6:47992..48195,AL583834.6:53640..53941, FT AL583834.6:57693..57792,AL583834.6:59980..61461, FT AL583834.6:62442..63081,43333030..43333178, FT 43336705..43337103)) FT /gene="ZNF318" FT /locus_tag="RP11-480N24.9-001" FT /standard_name="OTTHUMP00000016436" FT /product="zinc finger protein 318" FT /note="match: proteins: Sw:Q5VUA4.1 Sw:Q99PP2" FT /protein_id="CAH71374.2" FT /translation="MYRSSARSSVSSHRPKDDGGGGPRSGRSSGSSSGPARRSSPPPPP FT SGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPSPPRARRGSPSPPRGRRLFPPGPA FT GFRGSSRGESRADYARDGRGDHPGDSGSRRRSPGLCSDSLEKSLRITVGNDHFCVSTPE FT RRRLSDRLGSPVDNLEDMDRDDLTDDSVFTRSSQCSRGLERYISQEEGPLSPFLGQLDE FT DYRTKETFLHRSDYSPHISCHDELLRGTERNREKLKGYSIRSEERSREAKRPRYDDTVK FT INSMGGDHPSFTSGTRNYRQRRRSPSPRFLDPEFRELDLARRKREEEEERSRSLSQELV FT GVDGGGTGCSIPGLSGVLTASEPGYSLHRPEEVSVMPKKSILKKRIEVDIMEPSMQLES FT FSSSTSSSQDHPLYSGHPSLPLSGAIAAFASEIENKGTMVETALKEPQGNLYQWGPLPG FT IPKDNSPLREKFGSFLCHKDNLDLKAEGPERHTDFLLPHERASQDGSGFSRILSMLADS FT TSTQEKRRRSFPDIEDEEKFLYGDEEEDLKAESVPKPLGSSESEVMRQKASSLPSSAPA FT VKLESLEETNPEYAKIHDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSS FT VDRYFSADHCSSVDHRFSADRCSSVDHCFSADRRSSDPHRLESREAHHSNTHSPEVSHP FT HPPSPVDPYLLTKNSPPFLKSDHPVGHISGPEVVGSGFQSSVAVRCMLPSAPSAPIRLP FT HTAALSQFHMPRASQFAAARIPPNYQGPAIPPASFDAYRHYMAYAASRWPMYPTSQPSN FT HPVPEPHRIMPITKQATRSRPNLRVIPTVTPDKPKQKESLRGSIPAAQVPVQVSIPSLI FT RYNPEKISDEKNRASQKQKVIEEREKLKNDREARQKKMYYLRTELERLHKQQGEMLRKK FT RREKDGHKDPLLVEVSRLQDNIMKDIAELRQEAEEAEKKQSELDKVAQILGINIFDKSQ FT KSLSDSREPTEKPGKAEKSKSPEKVSSFSNSSSNKESKVNNEKFRTKSPKPAESPQSAT FT KQLDQPTAAYEYYDAGNHWCKDCNTICGTMFDFFTHMHNKKHTQTLDPYNRPWASKTQS FT EAKQDAIKRTDKITVPAKGSEFLVPISGFYCQLCEEFLGDPISGEQHVKGHQHNEKYKK FT YVDENPLYEERRNLDRQAGLAVVLETERRRQSELKRKLSEKPKEEKKEKKAKAVKEVKE FT DDKVSEKLEDQLSEGRNSPEKAENKRNTGIKLQLKEEVKKESPTSSSFGKFSWKKPEKE FT EEKSSLVTPSISKEEILESSKDKEDGKTEAGKAKPIKIKLSGKTVVAHTSPWMPVVTTS FT TQTKIRPNLPIPSTVLRKSCSATMSKPAPLNTFLSIKSSGTTAKPLPVVKESSADLLLP FT PDIISKAFGGEEVILKGSPEEKVVLAEKSEPSHLPEQILPPPPPPPPPPPPPPPVIPHP FT AAPSAAQANAILAPVKSNPVVSQTLSPGFVGPNILNPVLPVAIMASAQPAAIPSDETAP FT GVSESDRDQTLFSVLVRPPPPLSSVFSEQAKKLEKRNSCLATANAKDLYDIFYSSGGKG FT APETKGAPETKLSGGPLANGENSNLSRTKSSDTSSTSPLNSSASQEELHQDEGLVAAPI FT VSNSEKPIAKTLVALGKWSVVEHVGPKSTGSTYGFLQPLTRLCQSRPYETITPKTDTLA FT IWTSSSFQSDTSRDISPEKSELDLGEPGPPGVEPPPQLLDIQCKESQKLVEIHLRESVN FT QDKESQELRKSEDCRESEIETNTELKERVKELSEGIVDEGVSTSIGPHSIDDSNLNHGN FT RYMWEGEVKQPNLLMIDKEAEQSNKLMTGSETPSKVVIKLSPQACSFTKAKLDSFLSEA FT RSLLNPQDTPVKISAPELLLHSPARSAMCLTGSPQEQGVSVVSEEGLENSAPESASRTS FT RYRSLKLKRERSKDFQVKKIYELAVWDENKKRPETWESPEKPKTEALELQDVHPELTVT FT IESKALEDFEATDLKVEELTALGNLGDMPVDFCTTRVSPAHRSPTVLCQKVCEENSVSP FT IGCNSSDPADFEPIPSFSGFPLDSPKTLVLDFETEGERNSPNPRSVRIPSPNILKTGLT FT ENVDRGLGGLEGTHQALDLLAGGMMPEEVKESSQLDKQESLGLELKTINSAGLGPSPCL FT PDLVDFVTRTSGVQKDKLCSPLSEPGDPSKCSSLELGPLQLEISNASTTEVAILQVDDD FT SGDPLNLVKAPVSRSPPREQVIEDNMVPQGMPEQETTVGAIQDHTESSVHN" FT misc_feature 43341953..43341993 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 43352190..43455081 FT /note="annotated region of clone" FT misc_feature 43352190 FT /note="Clone_left_end: RP5-895C5" FT mRNA join(43395292..43395495,43395706..43395877, FT 43399880..43401098,43402359..43402586,43403489..43403645, FT 43403876..43403985,43405672..43405751,43406362..43406533, FT 43409600..43409698,43410708..43410897,43411671..43411748, FT 43411897..43412091,43412526..43412676,43412863..43413052, FT 43413337..43413680,43414015..43414184,43414986..43415146, FT 43415422..43415675,43416619..43416764,43416845..43416942, FT 43417160..43417272,43417667..43418164) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-002" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: ESTs: Em:AA135878 Em:AA135879 Em:AA228314 FT Em:AA872614 Em:AI279844 Em:AI351588 Em:AI572934 Em:AL523384 FT Em:AW190718 Em:AW273382 Em:AW483872 Em:BB767613 Em:BE134980 FT Em:BE261786 Em:BE313801 Em:BE349969 Em:BE389313 Em:BE504183 FT Em:BE899997 Em:BF002370 Em:BF076758 Em:BF182994 Em:BF190345 FT Em:BF206748 Em:BF304248 Em:BF339129 Em:BF456950 Em:BF563269 FT Em:BF683296 Em:BF685485 Em:BF685539 Em:BF957045 Em:BG333390 FT Em:BG333625 Em:BG338793 Em:BG338845 Em:BG469094 Em:BG469434 FT Em:BG832157 Em:BG832334 Em:BM006673 Em:R12184 Em:W45086" FT /note="match: cDNAs: Em:AK000002.1 Em:AL122095 FT Em:AL133613.1 Em:U66684.1" FT mRNA join(<43395594..43395705,43400973..43401098, FT 43402359..>43402639) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-004" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: ESTs: Em:BM353027" FT CDS join(<43395594..43395705,43400973..43401098, FT 43402359..>43402639) FT /codon_start=2 FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-004" FT /standard_name="OTTHUMP00000016439" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /protein_id="CAI23216.1" FT /translation="TGGPGSRAGLETGRPGWEVQAKPAVTLHSRHPQLSLQVGVAFVGG FT LILALLLVPVNKVIATRIMASNQEMLQHKDARVKLVTELLSGIRVIKFCGWEQALGARV FT EACRARELGRLRVIKYLDAACVYLWAALPVVISIVIFITYVLMGHQLTATKVRTRKEGD FT QHQGDFSEV" FT CDS join(43395717..43395877,43399880..43401098, FT 43402359..43402586,43403489..43403645,43403876..43403985, FT 43405672..43405751,43406362..43406533,43409600..43409698, FT 43410708..43410897,43411671..43411748,43411897..43412091, FT 43412526..43412676,43412863..43413052,43413337..43413680, FT 43414015..43414184,43414986..43415146,43415422..43415675, FT 43416619..43416764,43416845..43416942,43417160..43417272, FT 43417667..43417829) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-002" FT /standard_name="OTTHUMP00000016438" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: proteins: Sw:O15438 Sw:O35379 Sw:P33527 FT Sw:Q42093 Sw:Q42093 Sw:Q42093 Sw:Q42093 Sw:Q92887 Sw:Q9C8H1 FT Sw:Q9SKX0 Tr:Q94137 Tr:Q9N2N3 Tr:Q9NXY3 Tr:Q9VK56 FT Tr:Q9VLP5" FT /protein_id="CAI23217.1" FT /translation="MERLLAQLCGSSAAWPLPLWEGDTTGHCFTQLVLSALPHALLAVL FT SACYLGTPRSPDYILPCSPGWRLRLAASFLLSVFPLLDLLPVALPPGAGPGPIGLEVLA FT GCVAAVAWISHSLALWVLAHSPHGHSRGPLALALVALLPAPALVLTVLWHCQRGTLLPP FT LLPGPMARLCLLILQLAALLAYALGWAAPGGPREPWAQEPLLPEDQEPEVAEDGESWLS FT RFSYAWLAPLLARGACGELRQPQDICRLPHRLQPTYLARVFQAHWQEGARLWRALYGAF FT GRCYLALGLLKLVGTMLGFSGPLLLSLLVGFLEEGQEPLSHGLLYALGLAGGAVLGAVL FT QNQYGYEVYKVTLQARGAVLNILYCKALQLGPSRPPTGEALNLLGTDSERLLNFAGSFH FT EAWGLPLQLAITLYLLYQQVGVAFVGGLILALLLVPVNKVIATRIMASNQEMLQHKDAR FT VKLVTELLSGIRVIKFCGWEQALGARVEACRARELGRLRVIKYLDAACVYLWAALPVVI FT SIVIFITYVLMGHQLTATKVFTALALVRMLILPLNNFPWVINGLLEAKVSLDRIQLFLD FT LPNHNPQAYYSPDPPAEPSTVLELHGALFSWDPVGTSLETFISHLEVKKGMLVGIVGKV FT GCGKSSLLAAIAGELHRLRGHVAVRGLSKGFGLATQEPWIQFATIRDNILFGKTFDAQL FT YKEVLEACALNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKELYLLDDPL FT AAVDADVANHLLHRCILGMLSYTTRLLCTHRTEYLERADAVLLMEAGRLIRAGPPSEIL FT PLVQAVPKAWAENGQESDSATAQSVQNPEKTKEGLEEEQSTSGRLLQEESKKEGAVALH FT VYQAYWKAVGQGLALAILFSLLLMQATRNAADWWLSHWISQLKAENSSQEAQPSTSPAS FT MGLFSPQLLLFSPGNLYIPVFPLPKAAPNGSSDIRFYLTVYATIAGVNSLCTLLRAVLF FT AAGTLQAAATLHRRLLHRVLMAPVTFFNATPTGRILNRFSSDVACADDSLPFILNILLA FT NAAGLLGLLAVLGSGLPWLLLLLPPLSIMYYHVQRHYRASSRELRRLGSLTLSPLYSHL FT ADTLAGLSVLRATGATYRFEEENLRLLELNQRCQFATSATMQWLDIRLQLMGAAVVSAI FT AGIALVQHQQGLANPGLVGLSLSYALSLTGLLSGLVSSFTQTEAMLVSVERLEEYTCDL FT PQEPQGQPLQLGTGWLTQGGVEFQDVVLAYRPGLPNALDGVTFCVQPGEKLGIVGRTGS FT GKSSLLLVLFRLLEPSSGRVLLDGVDTSQLELAQLRSQLAIIPQEPFLFSGTVRENLDP FT QGLHKDRALWQALKQCHLSEVITSMGGLDGELGEGGRSLSLGQRQLLCLARALLTDAKI FT LCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELD FT SPATLRNQPHSLFQQLLQSSQQGVPASLGGP" FT mRNA join(43403536..43403645,43403876..43403985, FT 43405672..43406533,43409600..43409698,43410708..43411748, FT 43411897..43412091,43412526..43412676,43412863..43413052, FT 43413337..43413680,43414015..43414184,43414986..43415146, FT 43415422..43415675,43416619..43416764,43416845..43416942, FT 43417160..43417272,43417667..43418164) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-003" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: ESTs: Em:AA135878 Em:AA230178 Em:AI279844 FT Em:AL523384 Em:AW372949 Em:AW480555 Em:AW899636 Em:AW899699 FT Em:BB767613 Em:BE134980 Em:BE231809 Em:BE313801 Em:BE504183 FT Em:BE899997 Em:BF076758 Em:BF182994 Em:BF190345 Em:BF206748 FT Em:BF304248 Em:BF339129 Em:BF362896 Em:BF362897 Em:BF563269 FT Em:BF683296 Em:BF685485 Em:BF685539 Em:BG333390 Em:BG338793 FT Em:BG338845 Em:BG469094 Em:BG469434 Em:BG757898 Em:BM006673 FT Em:R12184 Em:W45086" FT /note="match: cDNAs: Em:AK024446.1 Em:U66684.1" FT mRNA join(43406449..43406533,43409600..43409799) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-005" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: ESTs: Em:BF354597" FT mRNA join(<43412838..43413052,43414986..>43415175) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-006" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: ESTs: Em:BG697359" FT CDS join(<43412838..43413052,43414986..>43415175) FT /codon_start=2 FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-006" FT /standard_name="OTTHUMP00000016440" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /protein_id="CAI23218.1" FT /translation="DSPLLTTQHPSVPTAQSCPQWLLRHPFLPHRVCDHCWCKFPLHPS FT PGSALCSRHPSSSCHSASPPAASSPYGLVGLSLSYALSLTGLLSGLVSSFTQTEAMLVS FT VERLEEYTCDLPQEPQGQPLQVGLYPHPRP" FT mRNA join(<43415404..43415675,43416619..43416764, FT 43416845..>43416942) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-007" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: ESTs: Em:BE809610 Em:BG756813 Em:BG757096 FT Em:BG758292" FT CDS join(<43415404..43415675,43416619..43416764, FT 43416845..>43416942) FT /codon_start=1 FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-007" FT /standard_name="OTTHUMP00000016441" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /protein_id="CAI23219.1" FT /translation="THGPHQLGTGWLTQGGVEFQDVVLAYRPGLPNALDGVTFCVQPGE FT KLGIVGRTGSGKSSLLLVLFRLLEPSSGRVLLDGVDTSQLELAQLRSQLAIIPQEPFLF FT SGTVRENLDPQGLHKDRALWQALKQCHLSEVITSMGGLDGELGEGGRSLSLGQRQLLCL FT ARALLTDAK" FT mRNA join(<43415464..43415675,43416619..43416764, FT 43416830..>43416942) FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-001" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /note="match: ESTs: Em:BM105016" FT CDS join(<43415464..43415675,43416619..43416764, FT 43416830..>43416942) FT /codon_start=1 FT /gene="ABCC10" FT /locus_tag="RP5-895C5.1-001" FT /standard_name="OTTHUMP00000016437" FT /product="ATP-binding cassette, sub-family C (CFTR/MRP), FT member 10" FT /protein_id="CAI23220.1" FT /translation="DVVLAYRPGLPNALDGVTFCVQPGEKLGIVGRTGSGKSSLLLVLF FT RLLEPSSGRVLLDGVDTSQLELAQLRSQLAIIPQEPFLFSGTVRENLDPQGLHKDRALW FT QALKQCHLSEVITSMDAFLAGGLDGELGEGGRSLSLGQRQLLCLARALLTDAK" FT polyA_site complement(43418091) FT polyA_signal complement(43418105..43418110) FT polyA_signal 43418112..43418117 FT polyA_signal 43418139..43418144 FT polyA_site 43418165 FT mRNA complement(join(43418090..43419012,43419678..43419729, FT 43420743..>43420823)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-002" FT /product="EGF-like-domain, multiple 9" FT /note="match: ESTs: Em:AI623110 Em:AI821058 Em:AI821110 FT Em:AI821806 Em:AW072286" FT CDS complement(join(43418277..43419012,43419678..43419729, FT 43420743..>43420823)) FT /codon_start=3 FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-002" FT /standard_name="OTTHUMP00000016448" FT /product="EGF-like-domain, multiple 9" FT /protein_id="CAI23221.1" FT /translation="GCQHGTCHQPWQCICHSGWAGKFCDKGFHGRDCERKAGPCEQAGS FT PCRNGGQCQDDQGFALNFTCRCLVGFVGARCEVNVDDCLMRPCANGATCLDGINRFSCL FT CPEGFAGRFCTINLDDCASRPCQRGARCRDRVHDFDCLCPSGYGGKTCELVLPVPDPPT FT TVDTPLGPTSAVVVPATGPAPHSAGAGLLRISVKEVVRRQEAGLGEPSLVALVVFGALT FT AALVLATVLLTLRAWRRGVCPPGPCCYPAPHYAPACQDQECQVSMLPAGLPLPRDLPPE FT PGKTTAL" FT CDS complement(join(43418891..43418892,43419691..43419822, FT 43420743..43420873,43422149..43422212,43422488..43422563)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-004" FT /standard_name="OTTHUMP00000016450" FT /product="EGF-like-domain, multiple 9" FT /protein_id="CAI23222.1" FT /translation="MPSGCRCLHLVCLLCILGAPGQPVRADDCSSHCDLAHGCCAPDGS FT CRCDPGWEGLHCERCVRMPGCQHGTCHQPWQCICHSGWAGKFCDKDEHICTTQSPCQNG FT GQCMYDGGGEYHCVCLPGFHGRDCERKAGP" FT CDS complement(join(43418277..43419012,43419678..43419822, FT 43420761..43420873,43422149..43422212,43422488..43422563)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-001" FT /standard_name="OTTHUMP00000016447" FT /product="EGF-like-domain, multiple 9" FT /protein_id="CAI23223.1" FT /translation="MPSGCRCLHLVCLLCILGAPGQPVRADDCSSHCDLAHGCCAPDGS FT CRCDPGWEGLHCERCVRMPGCQHGTCHQPWQCICHSGWADEHICTTQSPCQNGGQCMYD FT GGGEYHCVCLPGFHGRDCERKAGPCEQAGSPCRNGGQCQDDQGFALNFTCRCLVGFVGA FT RCEVNVDDCLMRPCANGATCLDGINRFSCLCPEGFAGRFCTINLDDCASRPCQRGARCR FT DRVHDFDCLCPSGYGGKTCELVLPVPDPPTTVDTPLGPTSAVVVPATGPAPHSAGAGLL FT RISVKEVVRRQEAGLGEPSLVALVVFGALTAALVLATVLLTLRAWRRGVCPPGPCCYPA FT PHYAPACQDQECQVSMLPAGLPLPRDLPPEPGKTTAL" FT CDS complement(join(43418277..43419012,43419678..43419822, FT 43420743..43420873,43422149..43422212,43422488..43422563)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-003" FT /standard_name="OTTHUMP00000016449" FT /product="EGF-like-domain, multiple 9" FT /note="match: proteins: Sw:O00548 Sw:O57409 Sw:O94813 FT Sw:P80370 Sw:P97677 Sw:Q01705 Sw:Q61483 Sw:Q6DI48 Sw:Q8UWJ4 FT Sw:Q9R1B9 Sw:Q9R1B9 Tr:O70534 Tr:P79941 Tr:Q90656 Tr:Q90819 FT Tr:Q91902 Tr:Q9YHU2" FT /protein_id="CAI23224.1" FT /translation="MPSGCRCLHLVCLLCILGAPGQPVRADDCSSHCDLAHGCCAPDGS FT CRCDPGWEGLHCERCVRMPGCQHGTCHQPWQCICHSGWAGKFCDKDEHICTTQSPCQNG FT GQCMYDGGGEYHCVCLPGFHGRDCERKAGPCEQAGSPCRNGGQCQDDQGFALNFTCRCL FT VGFVGARCEVNVDDCLMRPCANGATCLDGINRFSCLCPEGFAGRFCTINLDDCASRPCQ FT RGARCRDRVHDFDCLCPSGYGGKTCELVLPVPDPPTTVDTPLGPTSAVVVPATGPAPHS FT AGAGLLRISVKEVVRRQEAGLGEPSLVALVVFGALTAALVLATVLLTLRAWRRGVCPPG FT PCCYPAPHYAPACQDQECQVSMLPAGLPLPRDLPPEPGKTTAL" FT mRNA complement(join(43418090..43419012,43419678..43419822, FT 43420761..43420873,43422149..43422212,43422488..43422618, FT 43423133..43423328)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-001" FT /product="EGF-like-domain, multiple 9" FT /note="match: ESTs: Em:AI623110 Em:AI821806 Em:AI821856 FT Em:AW072286 Em:BE910587 Em:BM811564" FT mRNA complement(join(43418090..43419012,43419678..43419822, FT 43420743..43420873,43422149..43422212,43422488..43422618, FT 43423133..43423328)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-005" FT /product="EGF-like-domain, multiple 9" FT /note="match: ESTs: Em:AI821806 Em:AI821856 Em:AW072286 FT Em:BE790917 Em:BG868693 Em:BI916137 Em:BM799568" FT mRNA complement(join(43418090..43418892,43419691..43419822, FT 43420743..43420873,43422149..43422212,43422488..43422618, FT 43423725..43423786)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-004" FT /product="EGF-like-domain, multiple 9" FT /note="match: ESTs: Em:AA651619 Em:AI413481 Em:AI577346 FT Em:AI821806 Em:AI821856 Em:AW072286 Em:BB823871 Em:BE253630 FT Em:BE257903 Em:BG818601" FT /note="match: cDNAs: Em:BC000230.1 Em:BC006425.1" FT mRNA complement(join(43418092..43419012,43419678..43419822, FT 43420743..43420873,43422149..43422212,43422488..43422618, FT 43423725..43424370)) FT /gene="EGFL9" FT /locus_tag="RP5-895C5.2-003" FT /product="EGF-like-domain, multiple 9" FT /note="match: ESTs: Em:AA635690 Em:AA651619 Em:AA670417 FT Em:AI577346 Em:AI623110 Em:AI821058 Em:AI821110 Em:AI821806 FT Em:AW072286 Em:BE910587 Em:BG818148 Em:BG818601 FT Em:BM473972" FT /note="match: cDNAs: Em:AK055380.1" FT misc_feature 43429818 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 43443665 FT /note="Clone_left_end: RP11-22I24" FT mRNA join(43445311..43445366,43445825..43445970, FT AL355802.13:10638..10734,AL355802.13:11732..11857, FT AL355802.13:13501..13897) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-012" FT /product="novel protein" FT /note="match: ESTs: Em:AL532050" FT mRNA join(43445311..43445366,43445825..43445970, FT AL355802.13:10638..10734,AL355802.13:11680..11857, FT AL355802.13:13501..13529,AL355802.13:14283..14444, FT AL355802.13:15040..15106,AL355802.13:16158..16265, FT AL355802.13:16380..16463,AL355802.13:17518..19310) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-006" FT /product="novel protein" FT /note="match: ESTs: Em:AA253416 Em:AA284777 Em:AA321657 FT Em:AA335416 Em:AI004204 Em:AI089110 Em:AI128104 Em:AI131226 FT Em:AI150387 Em:AI652959 Em:AI697401 Em:AI937823 Em:AL044198 FT Em:AL526452 Em:AU131761 Em:AV690044 Em:AV697476 Em:AW044684 FT Em:AW135408 Em:AW206838 Em:AW381852 Em:AW511009 Em:AW731976 FT Em:BE278264 Em:BE279820 Em:BE877119 Em:BF115050 Em:BG298733 FT Em:BG404303 Em:BG820564 Em:BG913044 Em:BI691573 Em:BM141880 FT Em:BM142185 Em:BM153811 Em:N22928 Em:T09168 Em:T54515" FT /note="match: cDNAs: Em:AJ420477.1 Em:AK024269.1 FT Em:AK074241" FT mRNA join(43445311..43445370,43445875..43445970, FT AL355802.13:2656..2785,AL355802.13:10638..10734, FT AL355802.13:11732..11857,AL355802.13:13501..13529, FT AL355802.13:14283..14444,AL355802.13:15040..15106, FT AL355802.13:16158..16265,AL355802.13:16380..16463, FT AL355802.13:17518..19310) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-007" FT /product="novel protein" FT /note="match: ESTs: Em:AA643153 Em:AA822387 Em:AI128104 FT Em:AI131226 Em:AI632823 Em:AI937823 Em:AI962638 Em:AL044198 FT Em:AL526452 Em:AL526495 Em:AW106046 Em:AW206838 Em:BB596797 FT Em:BB643259 Em:BB664103 Em:BB843035 Em:BB852938 Em:BB872722 FT Em:BB873396 Em:BE278264 Em:BE279820 Em:BE863305 Em:BF585355 FT Em:BG298733 Em:BG404303 Em:BG818692 Em:BG913044 Em:BG923482 FT Em:BI031518 Em:BI193326 Em:BI691573 Em:BM142185 Em:T09168 FT Em:T54453" FT /note="match: cDNAs: Em:AK002882.1" FT mRNA join(43445311..43445366,43445825..43445970, FT AL355802.13:10638..10734,AL355802.13:11735..11857, FT AL355802.13:13501..13529,AL355802.13:14283..14444, FT AL355802.13:15040..15106,AL355802.13:16158..16265, FT AL355802.13:16380..16463,AL355802.13:17518..19310) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-008" FT /product="novel protein" FT /note="match: ESTs: Em:AA378284 Em:AA643153 Em:AA822387 FT Em:AI131226 Em:AI465636 Em:AI566712 Em:AI632823 Em:AI869273 FT Em:AI937823 Em:AL044198 Em:AL526495 Em:AV690044 Em:AW044684 FT Em:AW058487 Em:AW731976 Em:BE265387 Em:BE278264 Em:BE279820 FT Em:BE380665 Em:BE863305 Em:BE877119 Em:BF982521 Em:BG332571 FT Em:BG404303 Em:BI009186 Em:BI009245 Em:BM142185 Em:BM475819 FT Em:T09168" FT /note="match: cDNAs: Em:AJ420477 Em:AK074241" FT mRNA join(43445311..43445366,43445825..43445970, FT AL355802.13:10638..10734,AL355802.13:11735..11857, FT AL355802.13:13501..13529,AL355802.13:14283..14444, FT AL355802.13:15040..15106,AL355802.13:15345..15374, FT AL355802.13:16158..16265,AL355802.13:16380..16463, FT AL355802.13:17518..19310) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-009" FT /product="novel protein" FT /note="match: ESTs: Em:AA335416 Em:AA643153 Em:AA837002 FT Em:AI150387 Em:AI566712 Em:AI937823 Em:AI962638 Em:AL044198 FT Em:AL526452 Em:AL526495 Em:AL564262 Em:AW106046 Em:AW511009 FT Em:BB592750 Em:BE279820 Em:BE863305 Em:BE877119 Em:BF115050 FT Em:BG298733 Em:BG396238 Em:BG772690 Em:BM142185 Em:T09168" FT mRNA join(43445311..43445370,43445825..43445970, FT AL355802.13:10638..10734,AL355802.13:11732..11857, FT AL355802.13:13501..13529,AL355802.13:14283..14444, FT AL355802.13:15040..15106,AL355802.13:15345..15374, FT AL355802.13:16158..16265,AL355802.13:16380..16463, FT AL355802.13:17518..19310) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-010" FT /product="novel protein" FT /note="match: ESTs: Em:AA335416 Em:AA643153 Em:AA837002 FT Em:AI150387 Em:AI566712 Em:AI937823 Em:AI962638 Em:AL044198 FT Em:AL526452 Em:AL526495 Em:AL564262 Em:AW106046 Em:AW511009 FT Em:BB592750 Em:BE279820 Em:BE863305 Em:BE877119 Em:BF115050 FT Em:BG298733 Em:BG396238 Em:BG829147 Em:BM142185 Em:T09168" FT mRNA join(43445486..43445970,AL355802.13:10638..10734, FT AL355802.13:11732..11857) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-013" FT /product="novel protein" FT /note="match: ESTs: Em:BE546984" FT mRNA join(43445825..43445970,AL355802.13:10638..10734, FT AL355802.13:11732..11857,AL355802.13:13501..13529, FT AL355802.13:14283..14444,AL355802.13:15040..15106, FT AL355802.13:16158..>16265) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-014" FT /product="novel protein" FT /note="match: ESTs: Em:BM838068" FT mRNA join(43445845..43445970,43446397..43446456, FT AL355802.13:10638..10734,AL355802.13:11735..11857, FT AL355802.13:13501..13529,AL355802.13:14283..14444, FT AL355802.13:15040..15106,AL355802.13:16158..16265, FT AL355802.13:16380..16463,AL355802.13:17518..19310) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-011" FT /product="novel protein" FT /note="match: ESTs: Em:BG404303 Em:BM463920 Em:T09168" FT /note="match: cDNAs: Em:AJ420477 Em:AK074241" FT misc_feature 43454982 FT /note="Clone_left_end: RP3-337H4" FT misc_feature 43455082..43560916 FT /note="annotated region of clone" FT mRNA join(43457353..43457541,43465619..43465715, FT 43466713..43466838,43468482..43468510,43469264..43469425, FT 43470021..43470087,43470326..43471246,43471361..43471444, FT 43472499..43474291) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AI004204 Em:AI131226 Em:AI937823 FT Em:AW044684 Em:AW135408 Em:AW206838 Em:AW511009 Em:BE265387 FT Em:BE279820 Em:BE863305 Em:BM141880" FT /note="match: cDNAs: Em:AB056383.1" FT CDS join(43466740..43466838,43468482..43468510, FT 43469264..43469425,43470021..43470087,43471139..>43471246) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-014" FT /standard_name="OTTHUMP00000016459" FT /product="novel protein" FT /protein_id="CAI42617.1" FT /translation="MTSAAPAKKPYRKAPPEHRELRLEIPGSRLEQEEPLTDAERMKLL FT QEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQNSYTA FT SQRTNQELEDKLHTLIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEELN" FT CDS join(43466740..43466838,43468482..43468510, FT 43469264..43469425,43470021..43470087,43471139..43471246, FT 43471361..43471444,43472499..43473593) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-006" FT /standard_name="OTTHUMP00000016453" FT /product="novel protein" FT /protein_id="CAI42619.1" FT /translation="MTSAAPAKKPYRKAPPEHRELRLEIPGSRLEQEEPLTDAERMKLL FT QEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQNSYTA FT SQRTNQELEDKLHTLIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEELNERYRLDCN FT LAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAPSLAPGAVVPTSVI FT ARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPAPGSPTPQPNGEC FT HSLGTARGSPEEELPLPAFEKLNPYPTPSPPHPLYPGRRVIEFSEDKVRIPRNSPLPNC FT TYATRQAISLSLVEEGSERARPSPVPSTPASAQASPHHQPSPAPLTLSAPASSASSEED FT LLVSWQRAFVDRTPPPAAVAQRTAFGRDALPELQRHFAHSPADRDEVVQAPSARPEESE FT LLLPTEPDSGFPREEEELNLPISPEEERQSLLPINRGTEEGPGTSHTEGRAWPLPSSSR FT PQRSPKRMGVHHLHRKDSLTQAQEQGNLLN" FT CDS join(43466740..43466838,43468482..43468510, FT 43469264..43469425,43470021..43470087,43470326..43470355, FT 43471139..43471246,43471361..43471444,43472499..43473593) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-009" FT /standard_name="OTTHUMP00000016456" FT /product="novel protein" FT /protein_id="CAI42618.1" FT /translation="MTSAAPAKKPYRKAPPEHRELRLEIPGSRLEQEEPLTDAERMKLL FT QEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREELDKFKDKFRRLQNSYTA FT SQRTNQELEDKLHTLASLSHSWIFAIKKAEMDRKTLDWEIVELTNKLLDAKNTINKLEE FT LNERYRLDCNLAVQLLKCNKSHFRNHKFADLPCELQDMVRKHLHSGQEAASPGPAPSLA FT PGAVVPTSVIARVLEKPESLLLNSAQSGSAGRPLAEDVFVHVDMSEGVPGDPASPPAPG FT SPTPQPNGECHSLGTARGSPEEELPLPAFEKLNPYPTPSPPHPLYPGRRVIEFSEDKVR FT IPRNSPLPNCTYATRQAISLSLVEEGSERARPSPVPSTPASAQASPHHQPSPAPLTLSA FT PASSASSEEDLLVSWQRAFVDRTPPPAAVAQRTAFGRDALPELQRHFAHSPADRDEVVQ FT APSARPEESELLLPTEPDSGFPREEEELNLPISPEEERQSLLPINRGTEEGPGTSHTEG FT RAWPLPSSSRPQRSPKRMGVHHLHRKDSLTQAQEQGNLLN" FT mRNA join(43466758..43466838,43468347..43468510, FT 43469264..43469425,43470021..43470087,43471139..43471246, FT 43471361..43471444) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:BF308402" FT mRNA join(43466835..43466874,43468482..43468510, FT 43469264..43469425,43470021..43470087,43471139..43471246, FT 43471361..43471434) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-004" FT /product="novel protein" FT /note="match: ESTs: Em:BF844051" FT mRNA join(43468704..43469425,43470021..43470087, FT 43471139..43471246,43471361..43471405) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-003" FT /product="novel protein" FT /note="match: ESTs: Em:AW964139.1 Em:BQ063324.1" FT CDS join(<43469264..43469425,43470021..43470087, FT 43471139..43471246,43471361..43471741) FT /codon_start=2 FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-005" FT /standard_name="OTTHUMP00000016452" FT /product="novel protein" FT /protein_id="CAI42620.1" FT /translation="LLQEENEELRRRLASATRRTEALERELEIGQDCLELELGQSREEL FT DKFKDKFRRLQNSYTASQRTNQELEDKLHTLIKKAEMDRKTLDWEIVELTNKLLDAKNT FT INKLEELNERYRLDCNLAVQLLKCNKSHFRNHKFADVSRTHPLPAHIDHSGHCRTPLTP FT VSAPLSVLLFPLCPPLASMSPLKPVNSATGWCPVYCPGPITSSGGPALLVSVTETERED FT PGQEGEGSQSYLPKEY" FT mRNA join(<43469264..43469425,43470021..43470087, FT 43471139..43471246,43471361..43474291) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-005" FT /product="novel protein" FT /note="match: ESTs: Em:AA253416 Em:AA837002 Em:AI004204 FT Em:AI869273 Em:AI937823 Em:AL526452 Em:AW511009 Em:BE267594 FT Em:BE269968 Em:BF095288 Em:T54515" FT /note="match: cDNAs: Em:AL117398" FT polyA_signal 43474272..43474277 FT polyA_site 43474292 FT mRNA complement(join(43474707..43475046,43475194..43475382, FT 43475564..43475664,43476036..43476069)) FT /locus_tag="RP3-337H4.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:BI414612" FT mRNA complement(join(43474707..43475046,43475194..43475416, FT 43475564..43475664,43476036..43476158,43476498..43476658, FT 43477252..43478424)) FT /locus_tag="RP3-337H4.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA865352 Em:AA993397 Em:AI539370 FT Em:AI611039 Em:AI843203 Em:AL538217 Em:AL567201 Em:AW125689 FT Em:AW593985 Em:BE106776 Em:BE653671 Em:BE979841 Em:BE986032 FT Em:BE989078 Em:BF462840 Em:BF466862 Em:BF979883 Em:BG037070 FT Em:BG699250 Em:BG708893 Em:BI826302 Em:BI829250 Em:BM128735 FT Em:R41808" FT CDS complement(join(43474976..43475046,43475194..43475416, FT 43475564..43475664,43476036..43476158,43476498..43476658, FT 43477252..43477523)) FT /locus_tag="RP3-337H4.2-001" FT /standard_name="OTTHUMP00000016460" FT /product="novel protein" FT /protein_id="CAI42621.1" FT /translation="MLPSSIQISGEPLSGAEVRDICRGLRDNAVRLLSLRGCRLCDRDF FT GRICRALAGATSLAQLNLNLGVVSSPSRIKQLAEALRTNRSIQSLFLHGSPLTDAGLAL FT LNPALALHPALVALDLGDCMLGDEAINLICGLLPPDGAKSGLKELTLSANPGITPKGWS FT RLAIAVAHSSQVRVLNLDYNPLGDHVAGMLAVAVASSRTLEVLDLEGTGLTNQSAQTLL FT DMVENYPTALRSLVLAENSISPELQQQICDLLSEGEEEEEVAGGAGDTQEWERGREPAA FT HQRGSSSWMCPSDPSSQMVLMTSGLGDSLLAETEM" FT polyA_site complement(43479565) FT polyA_site complement(43479571) FT polyA_signal complement(43479590..43479595) FT mRNA complement(join(<43480566..43480612,43480807..43480938, FT 43481097..43481189,43481326..43481459)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-006" FT /product="novel protein" FT /note="match: ESTs: Em:AA465116" FT CDS complement(join(<43480566..43480612,43480807..43480938, FT 43481097..43481189,43481326..43481358)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-006" FT /standard_name="OTTHUMP00000016464" FT /product="novel protein" FT /protein_id="CAI42622.1" FT /translation="MIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIREG FT TLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITY" FT mRNA complement(join(43480952..43481189,43481326..43481371, FT 43483333..43483385)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-008" FT /product="novel protein" FT CDS complement(join(43479905..43480053,43480178..43480301, FT 43480499..43480612,43480807..43480938,43481097..43481189, FT 43481326..43481371,43483333..43483439,43483627..43483809)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-003" FT /standard_name="OTTHUMP00000016461" FT /product="novel protein" FT /note="match: proteins: Sw:Q9GZM5" FT /protein_id="CAI42623.1" FT /translation="MENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFL FT GMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIP FT IKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGYWLGV FT SSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIHLHALFYLFWLLVGGLST FT LRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVVEGILDTLEGPNIPPIQ FT RVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH" FT CDS complement(join(<43480499..43480612,43480807..43480938, FT 43481097..43481189,43481326..43481371,43483333..43483439, FT 43483627..43483809)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-004" FT /standard_name="OTTHUMP00000016462" FT /product="novel protein" FT /protein_id="CAI42624.1" FT /translation="MENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFL FT GMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIP FT IKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGYWLGV FT SSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIHLHALFYLFWLLVGGLST FT LRM" FT mRNA complement(join(43479570..43480053,43480178..43480301, FT 43480499..43480612,43480807..43480938,43481097..43481189, FT 43481326..43481371,43483333..43483439,43483627..43483833, FT 43484465..43484723)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-003" FT /product="novel protein" FT /note="match: ESTs: Em:AA047250 Em:AA464722 Em:AA636596 FT Em:AA704124 Em:AI023085 Em:AI573261 Em:AI590717 Em:AI816184 FT Em:AI816224 Em:AI952520 Em:AI987705 Em:AL517844 Em:AL517845 FT Em:AL520695 Em:AL521341 Em:AL523873 Em:AL523874 Em:AL568813 FT Em:AL569494 Em:AL577057 Em:AU118528 Em:AU145068 Em:AV610327 FT Em:AW486567 Em:AW511862 Em:AW878991 Em:AW882083 Em:BE207437 FT Em:BE252659 Em:BE276188 Em:BE562740 Em:BE616781 Em:BE729866 FT Em:BE878847 Em:BE901191 Em:BF314463 Em:BF704001 Em:BG420890 FT Em:BG751191 Em:BG756736 Em:BG763007 Em:BG824587 Em:BI051133 FT Em:BI051143 Em:BI198401 Em:BI295564 Em:BI838775 Em:BI910897 FT Em:BM047432 Em:BM458234" FT /note="match: cDNAs: Em:AK000946.1 Em:AK011822.1 FT Em:AK021655.1 Em:AK022757.1 Em:AL050274.1 Em:BC011161.1" FT mRNA complement(join(43479958..43480053,43480178..43480301, FT 43480499..43481371,43483627..43483925,43484465..43484723)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-007" FT /product="novel protein" FT /note="match: cDNAs: Em:AW361844 Em:AW483062 Em:BI459363 FT Em:BM008465 Em:W25188" FT mRNA complement(join(43480499..43480612,43480807..43480938, FT 43481097..43481189,43481326..43481371,43483344..43483439, FT 43483627..43483925,43484465..43484723)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-001" FT /product="novel protein" FT /note="match: ESTs: Em:AL520696" FT mRNA complement(join(<43480499..43480612,43480807..43480938, FT 43481097..43481189,43481326..43481371,43483333..43483439, FT 43483627..43483925,43484465..43484723)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-004" FT /product="novel protein" FT /note="match: ESTs: Em:AW401849 Em:BE293930 Em:BE297641 FT Em:BF205869 Em:BF310841 Em:BG425024 Em:BI769214 Em:BI906667 FT Em:BI909874 Em:BI912453 Em:BM050718" FT mRNA complement(join(<43480499..43480612,43480807..43480938, FT 43481097..43481189,43481326..43481371,43483333..43483439, FT 43483627..43483784,43484465..>43484723)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-005" FT /product="novel protein" FT /note="match: ESTs: Em:BE312989 Em:BF206681 Em:BG325425" FT CDS complement(join(<43480499..43480612,43480807..43480938, FT 43481097..43481189,43481326..43481371,43483333..43483439, FT 43483627..43483784,43484465..>43484723)) FT /codon_start=1 FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-005" FT /standard_name="OTTHUMP00000016463" FT /product="novel protein" FT /protein_id="CAI42626.1" FT /translation="VHVPSFRKLLLSKHPGFSFLCSGRSHLSSTLDVYLPEAHILPTPR FT AGLARVSATGALKGHGNYSGAGGRRPKWSWPGMGRVRRKHPGSSFEDMGELHQRLREEE FT VDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP FT YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIR FT EGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYN FT IHLHALFYLFWLLVGGLSTLRM" FT mRNA complement(join(43483030..43483439,43483627..43483706, FT 43483764..43483833,43484465..43484723)) FT /gene="RP3-337H4.3" FT /locus_tag="RP3-337H4.3-002" FT /product="novel protein" FT /note="match: ESTs: Em:BI822291" FT mRNA join(43484827..43484916,43485044..43485115, FT 43487071..43487312) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-002" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:AV743003" FT mRNA join(43484827..43484916,43485044..43485115, FT 43487071..43487178,43487444..43488104) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-010" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:BI762456 Em:BI763501 Em:BI913592" FT mRNA join(43484827..43484916,43485044..43485115, FT 43487071..43487178,43487444..43487923,43488013..43488165, FT 43488363..43488478) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-001" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:BG547329 Em:BI090696 Em:BI762456 FT Em:BI914890" FT mRNA join(43484827..43484916,43485044..43485115, FT 43487071..43487178,43487444..43487576,43487804..43487923, FT 43488013..43488165,43488363..43488512,43488670..43488786, FT 43488920..43489244) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-008" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:AI161026 Em:AI365112 Em:AI564252 FT Em:AI569244 Em:AI610306 Em:AI982520 Em:AU121976 Em:AV601111 FT Em:AV735527 Em:AV742097 Em:AV742134 Em:AW469188 Em:AW628455 FT Em:AW769333 Em:BE514862 Em:BE903303 Em:BF037021 Em:BF041201 FT Em:BF312397 Em:BF673428 Em:BF792085 Em:BF794587 Em:BF978196 FT Em:BG324302 Em:BG338000 Em:BG389526 Em:BG432940 Em:BG490257 FT Em:BG533094 Em:BG576888 Em:BG715528 Em:BG765740 Em:BI197549 FT Em:BI255850 Em:BI410452 Em:BI830514 Em:BI856406 Em:BI859319 FT Em:BI915523 Em:BM015262 Em:BM458851 Em:W60494" FT /note="match: cDNAs: Em:AF008442.1 Em:BC008118.1 FT Em:BC008863.1 Em:D31966.1" FT mRNA join(43484827..43484916,43485044..43485115, FT 43487071..43487178,43487444..43487576,43487804..43487923, FT 43488013..43488165,43488363..43488512,43488670..43489244) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-009" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:AA910182 Em:AI365112 Em:AU121976 FT Em:AV601111 Em:BE013733 Em:BE048446 Em:BE514862 Em:BE539072 FT Em:BE540671 Em:BF036832 Em:BF246142 Em:BF304473 Em:BF312397 FT Em:BF312411 Em:BF673428 Em:BG338000 Em:BG395491 Em:BG432940 FT Em:BG533094 Em:BG565726 Em:BG576888 Em:BG715528 Em:BI197549 FT Em:BM015262" FT /note="match: cDNAs: Em:AF047441.1" FT CDS join(43484848..43484916,43485044..43485115, FT 43487071..43487229) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-002" FT /standard_name="OTTHUMP00000016465" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /protein_id="CAI42627.1" FT /translation="MAASQAVEEMRSRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRF FT EKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVLAGMVTRLELLWELH" FT CDS join(43484848..43484916,43485044..43485115, FT 43487071..43487178,43487444..43487576,43487804..43487923, FT 43488013..43488165,43488363..43488512,43488670..43488809) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-009" FT /standard_name="OTTHUMP00000016471" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: proteins: Sw:O15160" FT /protein_id="CAI42628.1" FT /translation="MAASQAVEEMRSRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRF FT EKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDE FT ILAHRLGLIPIHADPRLFEYRNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELY FT VNHKVYTRHMTWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDH FT AKFSPVATASYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANPRLD FT TFSREIFRNEKLKKVVRLARVRDHYICEYEVVR" FT CDS join(43484848..43484916,43485044..43485115, FT 43487071..43487178,43487444..43487576,43487804..43487923, FT 43488013..43488165,43488363..43488512,43488670..43488786, FT 43488920..43489038) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-008" FT /standard_name="OTTHUMP00000016470" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: proteins: Sw:O15160 Sw:O94616 Sw:P07703 FT Tr:O08521 Tr:Q29590 Tr:Q9UAY9 Tr:Q9VMX3" FT /protein_id="CAI42629.1" FT /translation="MAASQAVEEMRSRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRF FT EKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDE FT ILAHRLGLIPIHADPRLFEYRNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELY FT VNHKVYTRHMTWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDH FT AKFSPVATASYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANPRLD FT TFSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDEL FT DAVQMD" FT mRNA join(<43484850..43484916,43485044..43485115, FT 43487071..43487178,43487444..43487576,43488013..>43488050) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-007" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:AW786462" FT CDS join(<43484850..43484916,43485044..43485115, FT 43487071..43487178,43487444..43487576,43488013..>43488050) FT /codon_start=2 FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-007" FT /standard_name="OTTHUMP00000016469" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /protein_id="CAI42630.1" FT /translation="AASQAVEEMRSRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRFE FT KNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEI FT LAHRLGLIPIHADPRLFEYRNQVYTRHMTWIPLGN" FT misc_feature 43486349..43486482 FT /note="Sequence from clone PCR only" FT CDS join(<43487782..43487874,43488738..43488786, FT 43488920..43489038) FT /codon_start=1 FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-006" FT /standard_name="OTTHUMP00000016468" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /protein_id="CAI42631.1" FT /translation="GAPSICAGDEEGTEIDTLQFRLQVRCTRNPHKLKKVVRLARVRDH FT YIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELDAVQMD" FT mRNA join(<43487782..43487874,43488738..43488786, FT 43488920..43489244) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-006" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:BF064053" FT mRNA join(43487804..43487923,43488054..43488165, FT 43488363..43488512,43488670..43488786) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-003" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:BE807947" FT CDS join(<43487804..43487923,43488013..43488165, FT 43488363..43488517,43488729..43488786,43488920..43489038) FT /codon_start=3 FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-004" FT /standard_name="OTTHUMP00000016466" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /protein_id="CAI42632.1" FT /translation="DEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHM FT TWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATAS FT YRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQGMRNEKLKKVVRLARVRDHYIFS FT VESTGVLPPDVLVSEAIKVLMGKCRRFLDELDAVQMD" FT CDS join(<43487804..43487923,43488013..43488165, FT 43488670..43488786,43488920..43489038) FT /codon_start=3 FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-005" FT /standard_name="OTTHUMP00000016467" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /protein_id="CAI42633.1" FT /translation="DEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHM FT TWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKKVARVANPRLDT FT FSREIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELD FT AVQMD" FT mRNA join(<43487804..43487923,43488013..43488165, FT 43488363..43488517,43488729..43488786,43488920..43489244) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-004" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:AI365112 Em:AI652847 Em:AI656289 FT Em:AV726870" FT mRNA join(<43487804..43487923,43488013..43488165, FT 43488670..43488786,43488920..43489244) FT /gene="POLR1C" FT /locus_tag="RP3-337H4.4-005" FT /product="polymerase (RNA) I polypeptide C, 30kDa" FT /note="match: ESTs: Em:AA733038 Em:AI363174 Em:AI365112 FT Em:AI652847 Em:AI656289 Em:AI936777 Em:AI982520 FT Em:AU157814" FT polyA_signal 43489228..43489233 FT polyA_site 43489245 FT polyA_site complement(43490068) FT polyA_site complement(43490072) FT polyA_signal complement(43490093..43490098) FT polyA_site complement(43490631) FT polyA_signal complement(43490647..43490652) FT mRNA complement(join(43491412..43491743,43492209..43492373, FT 43492569..43492836)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-009" FT /product="exportin 5" FT /note="match: ESTs: Em:BG058723 Em:BG681843" FT mRNA complement(join(43492209..43492373,43492569..43492706, FT 43492845..43492952,43493577..43493659,43494423..43494485, FT 43495409..43495469,43495897..43495943)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-005" FT /product="exportin 5" FT /note="match: ESTs: Em:AL045677" FT mRNA complement(join(43490072..43491637,43494418..43494485, FT 43495372..43495391,43495446..43495469,43495897..43495943, FT 43496566..>43496663)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-006" FT /product="exportin 5" FT /note="match: ESTs: Em:AA541480 Em:AA828272 Em:AI564115 FT Em:AU148943 Em:AU149348 Em:AV692610 Em:AV698309 Em:AW731714 FT Em:AW971796" FT CDS complement(join(43491536..43491637,43494418..43494485, FT 43495372..43495391,43495446..43495469,43495897..43495943, FT 43496566..>43496663)) FT /codon_start=3 FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-006" FT /standard_name="OTTHUMP00000016476" FT /product="exportin 5" FT /protein_id="CAI42634.1" FT /translation="VFVKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQKWQVINQRS FT LLCGEDEAADEEVMDLITVCCVSKKGADHSSAPPADGDGKGVAWPPSLNPESSFWASFL FT GLSCHLFFPFVADL" FT mRNA complement(join(43490072..43491630,43493646..43493659, FT 43494423..43494485,43495372..43495469,43495897..43495943, FT 43496566..43496663,43498426..>43498562)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-004" FT /product="exportin 5" FT /note="match: ESTs: Em:AA877275 Em:AI125776 Em:AI565835 FT Em:AI829810 Em:AI860718 Em:AI989829 Em:AL045678 Em:AW971796 FT Em:BF510285" FT CDS complement(join(43491613..43491630,43493646..43493659, FT 43494423..43494485,43495372..43495469,43495897..43495943, FT 43496566..43496663,43498426..>43498562)) FT /codon_start=2 FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-004" FT /standard_name="OTTHUMP00000016475" FT /product="exportin 5" FT /protein_id="CAI42635.1" FT /translation="FHILGKAGPSMQQDFYTVEDLATQLLSSAFVNLNNIPDYRLRPML FT RVFVKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQKWQVINQRSLLCGEDEAADENP FT ESQEMLEEQLVRMLTREVMDLITVCCVSKKGADHSSAPPADGDDEEMMPGHHL" FT misc_feature 43502709 FT /note="Clone_right_end: RP5-895C5" FT CDS complement(43506559..43507440) FT /pseudo FT /locus_tag="RP3-337H4.6-001" FT /product="40S ribosomal protein S2 (RPS2) pseudogene" FT /note="match: proteins: Sw:O18789 Sw:O74892 Sw:P25444 FT Sw:P27952 Sw:P46791 Sw:P49154 Sw:P49688 Sw:P51403" FT mRNA complement(join(43490072..43491520,43517630..43517671, FT 43519035..43519190,43521110..>43521240)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-007" FT /product="exportin 5" FT /note="match: ESTs: Em:AA731726 Em:AI125776 Em:AI351806 FT Em:AI499230 Em:AI989829 Em:AL045678 Em:AW083527 Em:AW235892 FT Em:AW971796 Em:BE220554" FT CDS complement(join(43491398..43491520,43517630..43517671, FT 43519035..43519190,43521110..>43521240)) FT /codon_start=3 FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-007" FT /standard_name="OTTHUMP00000016477" FT /product="exportin 5" FT /protein_id="CAI42637.1" FT /translation="CSAVGTGEGSLCSVFSPSFVQWEAMTLFLESVITQMFRTLNREEI FT PVNDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSKLFSSVTFET FT VEESKPPHFPPLSAWKEIQVWSWREQALCRTRSNYTKVSRKGVRA" FT mRNA complement(join(43490072..43491552,43491692..43491743, FT 43492209..43492373,43492569..43492706,43492845..43492952, FT 43493577..43493659,43494423..43494485,43495372..43495469, FT 43495897..43495943,43496566..43496649,43498412..43498562, FT 43499217..43499313,43501644..43501744,43514308..43514489, FT 43515345..43515444,43515998..43516197,43517226..43517315, FT 43517630..43517671,43519035..43519190,43521110..>43521240)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-003" FT /product="exportin 5" FT /note="match: cDNAs: Em:AK024301.1" FT CDS complement(join(43491536..43491552,43491692..43491743, FT 43492209..43492373,43492569..43492706,43492845..43492952, FT 43493577..43493659,43494423..43494485,43495372..43495469, FT 43495897..43495943,43496566..43496649,43498412..43498562, FT 43499217..43499313,43501644..43501744,43514308..43514489, FT 43515345..43515444,43515998..43516197,43517226..43517315, FT 43517630..43517671,43519035..43519190,43521110..>43521240)) FT /codon_start=3 FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-003" FT /standard_name="OTTHUMP00000016474" FT /product="exportin 5" FT /protein_id="CAI42638.1" FT /translation="CSAVGTGEGSLCSVFSPSFVQWEAMTLFLESVITQMFRTLNREEI FT PVNDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSKLFSSVTFET FT VEESKAPRTRAVRNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQME FT KCALMEALVLISNQFKNYERQKVFLEELMAPVASIWLSQDMHRVLSDVDAFIAYVGTDQ FT KSCDPGLEDPCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAGGFVVGYTSSGNPIFR FT NPCTEQILKLLDNLLALIRTHNTLYAPEMLAKMAEPFTKALDMLDAEKSAILGLPQPLL FT ELNDSPVFKTVLERMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDLATQLLSSAFVNL FT NNIPDYRLRPMLHILSKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQKWQVINQRSL FT LCGEDEAADENPESQEMLEEQLVRMLTREVMDLITVCCVSKKGADHSSAPPADGDDEEM FT MATEVTPSAMAELTDLGKCLMKHEDVCTALLITAFNSLAWKDTLSCQRTTSQLCWPLLK FT QVLSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPRYLEIRAVME FT QIPEIQKDSLDQFDCKLLNPSLQKVADKRRKDQFKRLIAGCIGKPLGEQFRKEVHIKNL FT PFVADL" FT mRNA complement(join(43490072..43490474,43493600..43493659, FT 43494423..43494485,43495372..43495469,43495897..43495943, FT 43496566..43496649,43498412..43498562,43499217..43499313, FT 43501644..43501744,43514308..43514489,43515345..43515444, FT 43515998..43516197,43517226..43517315,43517630..43517671, FT 43519035..43519190,43521110..43521240,43523573..43523701, FT 43526238..43526328,43527915..>43528040)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-002" FT /product="exportin 5" FT /note="match: ESTs: Em:AA541480 Em:AA709255 Em:AI623250 FT Em:AL528825 Em:AU133476 Em:AU134832 Em:AW996332 Em:BE077355 FT Em:BF062964 Em:BF088827 Em:BF094604 Em:BI065635 FT Em:BM044265" FT /note="match: cDNAs: Em:AK023431.1" FT CDS complement(join(43490422..43490474,43493600..43493659, FT 43494423..43494485,43495372..43495469,43495897..43495943, FT 43496566..43496649,43498412..43498562,43499217..43499313, FT 43501644..43501744,43514308..43514489,43515345..43515444, FT 43515998..43516197,43517226..43517315,43517630..43517671, FT 43519035..43519190,43521110..43521240,43523573..43523701, FT 43526238..43526328,43527915..>43528040)) FT /codon_start=1 FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-002" FT /standard_name="OTTHUMP00000016473" FT /product="exportin 5" FT /protein_id="CAI42639.1" FT /translation="FLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGF FT PSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQ FT LSTFLDAGSVNSCSAVGTGEGSLCSVFSPSFVQWEAMTLFLESVITQMFRTLNREEIPV FT NDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSKLFSSVTFETVE FT ESKAPRTRAVRNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEKC FT ALMEALVLISNQFKNYERQKVFLEELMAPVASIWLSQDMHRVLSDVDAFIAYVGTDQKS FT CDPGLEDPCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAGGFVVGYTSSGNPIFRNP FT CTEQILKLLDNLLALIRTHNTLYAPEMLAKMAEPFTKALDMLDAEKSAILGLPQPLLEL FT NDSPVFKTVLERMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDLATQLLSSAFVNLNN FT IPDYRLRPMLHILSKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQKWQVINQRSLLC FT GEDEAADENPESQEMLEEQLVRMLTREVMDLITVCCVSKKGADHSSAPPADGDDEEMMA FT TEVTPSAMAELTDLVSIQSTDKRVSPRAEVD" FT mRNA complement(join(43490072..43491743,43492209..43492373, FT 43492569..43492706,43492845..43492952,43493577..43493659, FT 43494423..43494485,43495372..43495469,43495897..43495943, FT 43496566..43496649,43498412..43498562,43499217..43499313, FT 43501644..43501744,43514308..43514489,43515345..43515444, FT 43515998..43516197,43517226..43517315,43517630..43517671, FT 43519035..43519190,43521110..43521240,43523573..43523701, FT 43526238..43526328,43527915..43528040,43528661..43528744, FT 43529984..43530083,43533397..43533473,43534906..43535091, FT 43536448..43536474,43538239..43538421,43538594..43538731, FT 43540243..43540315,43541217..43541338,43543497..43543676)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-001" FT /product="exportin 5" FT /note="match: ESTs: Em:AA308100 Em:AA404723 Em:AA677525 FT Em:AI564115 Em:AI686140 Em:AI760606 Em:AI829810 Em:AI989829 FT Em:AL514613 Em:AL514614 Em:AL528825 Em:AL563260 Em:AU124844 FT Em:AU125249 Em:AU125578 Em:AU125748 Em:AU133476 Em:AU149212 FT Em:AU149348 Em:AW084538 Em:AW235892 Em:AW347882 Em:AW554595 FT Em:AW673567 Em:AW731714 Em:AW936436 Em:AW971796 Em:AW996332 FT Em:BE046892 Em:BE099089 Em:BE197108 Em:BE254014 Em:BE255692 FT Em:BE743240 Em:BE781773 Em:BE895675 Em:BE929957 Em:BF094815 FT Em:BF158723 Em:BF181970 Em:BF309471 Em:BF450456 Em:BF957408 FT Em:BF965692 Em:BG251133 Em:BG479411 Em:BG683334 Em:BG818788 FT Em:BI261395 Em:BI408382 Em:BI853706 Em:BI858213 Em:BM127386 FT Em:BM212576 Em:BM213076 Em:BM461815 Em:BM473797 Em:R49469 FT Em:T96934 Em:W69296" FT /note="match: cDNAs: Em:AB033117.1 Em:AF271159.1 FT Em:AF298880.1 Em:AF343581.1 Em:AK001195.1 Em:AK022718.1 FT Em:AK025864.1 Em:AL137467.1 Em:BC000129.1 Em:BC008347.1 FT Em:BC009969.1" FT CDS complement(join(43491606..43491743,43492209..43492373, FT 43492569..43492706,43492845..43492952,43493577..43493659, FT 43494423..43494485,43495372..43495469,43495897..43495943, FT 43496566..43496649,43498412..43498562,43499217..43499313, FT 43501644..43501744,43514308..43514489,43515345..43515444, FT 43515998..43516197,43517226..43517315,43517630..43517671, FT 43519035..43519190,43521110..43521240,43523573..43523701, FT 43526238..43526328,43527915..43528040,43528661..43528744, FT 43529984..43530083,43533397..43533473,43534906..43535091, FT 43536448..43536474,43538239..43538421,43538594..43538731, FT 43540243..43540315,43541217..43541338,43543497..43543601)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-001" FT /standard_name="OTTHUMP00000016472" FT /product="exportin 5" FT /note="match: proteins: Tr:Q9VWE7" FT /protein_id="CAI42640.1" FT /translation="MAMDQVNALCEQLVKAVTVMMDPNSTQRYRLEALKFCEEFKEKCP FT ICVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLN FT ILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAED FT VVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCR FT VGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKL FT EDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGAD FT SDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLR FT ASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTS FT FQMAGEWLKYQLSTFLDAGSVNSCSAVGTGEGSLCSVFSPSFVQWEAMTLFLESVITQM FT FRTLNREEIPVNDGIELLQMVLNFDTKDPLILSCVLTNVSALFPFVTYRPEFLPQVFSK FT LFSSVTFETVEESKAPRTRAVRNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLS FT NELLLTQMEKCALMEALVLISNQFKNYERQKVFLEELMAPVASIWLSQDMHRVLSDVDA FT FIAYVGTDQKSCDPGLEDPCGLNRARMSFCVYSILGVVKRTCWPTDLEEAKAGGFVVGY FT TSSGNPIFRNPCTEQILKLLDNLLALIRTHNTLYAPEMLAKMAEPFTKALDMLDAEKSA FT ILGLPQPLLELNDSPVFKTVLERMQRFFSTLYENCFHILGKAGPSMQQDFYTVEDLATQ FT LLSSAFVNLNNIPDYRLRPMLHILSKPLVLFCPPEHYEALVSPILGPLFTYLHMRLSQK FT WQVINQRSLLCGEDEAADENPESQEMLEEQLVRMLTREVMDLITVCCVSKKGADHSSAP FT PADGDDEEMMATEVTPSAMAELTDLGKCLMKHEDVCTALLITAFNSLAWKDTLSCQRTT FT SQLCWPLLKQVLSGTLLADAVTWLFTSVLKGLQMHGQHDGCMASLVHLAFQIYEALRPR FT YLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQKVADKRRKDQFKRLIAGCIGKPLGEQF FT RKEVHIKNLPSLFKKTKPMLETEVLDNDGGGLATIFEP" FT mRNA complement(join(43490072..43491743,43492209..43492373, FT 43492569..43492706,43492845..43492952,43493577..43493659, FT 43494423..43494485,43495372..43495469,43495897..43495943, FT 43496566..43496649,43498412..43498562,43499217..43499313, FT 43501644..43501744,43514308..43514489,43515345..43515444, FT 43515998..43516197,43517226..43517315,43517630..43517671, FT 43519035..43519190,43521110..43521240,43523573..43523701, FT 43526238..43526328,43527915..43528040,43528661..43528744, FT 43529984..43530057,43540243..43540315,43541217..43541338, FT 43543497..43543676)) FT /gene="XPO5" FT /locus_tag="RP3-337H4.5-008" FT /product="exportin 5" FT /note="match: ESTs: Em:AA541480 Em:AA638918 Em:AA677525 FT Em:AA725712 Em:AI499230 Em:AI623287 Em:AI760606 Em:AI860718 FT Em:AI925972 Em:AI989829 Em:AL514613 Em:AL528825 Em:AL563260 FT Em:AU124844 Em:AU125578 Em:AU125748 Em:AU133476 Em:AU148943 FT Em:AU149212 Em:AU149348 Em:AW083527 Em:AW137523 Em:AW347882 FT Em:AW511164 Em:AW971796 Em:BB843285 Em:BE048569 Em:BE197108 FT Em:BE254014 Em:BE255692 Em:BE894308 Em:BE895675 Em:BF088827 FT Em:BF094693 Em:BF094796 Em:BF094815 Em:BF197508 Em:BF957408 FT Em:BG034441 Em:BG074888 Em:BG746544 Em:BG760739 Em:BG818788 FT Em:BI408382 Em:BI853706 Em:BI858213 Em:BM044265 Em:BM127386 FT Em:BM196403 Em:BM212576 Em:BM474536" FT /note="match: cDNAs: Em:AK056619.1" FT mRNA join(43543887..43544177,43550053..43550193, FT 43550744..43550878,43555009..43555226, FT AL353602.10:4617..4786,AL353602.10:7909..8012, FT AL353602.10:10813..10932,AL353602.10:11536..11659, FT AL353602.10:12175..12240,AL353602.10:17475..17644, FT AL353602.10:20581..22581) FT /gene="POLH" FT /locus_tag="RP11-22I24.1-001" FT /product="polymerase (DNA directed), eta" FT /note="match: ESTs: Em:AA263100 Em:AA503619 Em:AA740992 FT Em:AI788034 Em:AU141481 Em:AU159033 Em:AW069783 Em:AW500974 FT Em:AW501415 Em:AW672999 Em:AW821187 Em:BB638931 Em:BE247611 FT Em:BE396589 Em:BE397520 Em:BE513962 Em:BE514130 Em:BE559889 FT Em:BE560699 Em:BE561029 Em:BE562083 Em:BF814524 Em:BF844480 FT Em:BF963202 Em:BG684347 Em:BG719631 Em:BG721650 Em:BG750509 FT Em:BI161368 Em:BI226147 Em:BI861196 Em:BI861960 Em:BM051627 FT Em:BM051808 Em:BM471882 Em:BM472352 Em:BM476481" FT /note="match: cDNAs: Em:AB024313.1 Em:AB027128.1 FT Em:AF158185.1 Em:AJ420484.1 Em:AK023893.1 Em:AK025631.1" FT mRNA join(43544034..43544177,43550053..43550193, FT 43550744..43550878,43555009..43555226, FT AL353602.10:4617..4786,AL353602.10:7909..8012, FT AL353602.10:10813..10932,AL353602.10:11536..11659, FT AL353602.10:12175..12240,AL353602.10:17475..17644, FT AL353602.10:20652..22581) FT /gene="POLH" FT /locus_tag="RP11-22I24.1-003" FT /product="polymerase (DNA directed), eta" FT /note="match: ESTs: Em:AA263100 Em:AA487384 Em:AA503619 FT Em:AA740992 Em:AA835696 Em:AU159033 Em:AW500974 Em:AW501081 FT Em:BB236630 Em:BG750509 Em:BI325034 Em:BI438288 Em:BM472352 FT Em:BM476481 Em:H96387" FT /note="match: cDNAs: Em:BC015742.1" FT mRNA join(43544111..43544177,43550744..43550878, FT 43555009..>43555137) FT /gene="POLH" FT /locus_tag="RP11-22I24.1-002" FT /product="polymerase (DNA directed), eta" FT /note="match: ESTs: Em:H96386" FT mRNA join(AL359813.23:93122..93177,AL359813.23:93636..93781, FT 43465619..43465715,43466713..43466838,43468482..43468878) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-012" FT /product="novel protein" FT /note="match: ESTs: Em:AL532050" FT mRNA join(AL359813.23:93122..93177,AL359813.23:93636..93781, FT 43465619..43465715,43466661..43466838,43468482..43468510, FT 43469264..43469425,43470021..43470087,43471139..43471246, FT 43471361..43471444,43472499..43474291) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-006" FT /product="novel protein" FT /note="match: ESTs: Em:AA253416 Em:AA284777 Em:AA321657 FT Em:AA335416 Em:AI004204 Em:AI089110 Em:AI128104 Em:AI131226 FT Em:AI150387 Em:AI652959 Em:AI697401 Em:AI937823 Em:AL044198 FT Em:AL526452 Em:AU131761 Em:AV690044 Em:AV697476 Em:AW044684 FT Em:AW135408 Em:AW206838 Em:AW381852 Em:AW511009 Em:AW731976 FT Em:BE278264 Em:BE279820 Em:BE877119 Em:BF115050 Em:BG298733 FT Em:BG404303 Em:BG820564 Em:BG913044 Em:BI691573 Em:BM141880 FT Em:BM142185 Em:BM153811 Em:N22928 Em:T09168 Em:T54515" FT /note="match: cDNAs: Em:AJ420477.1 Em:AK024269.1 FT Em:AK074241" FT mRNA join(AL359813.23:93122..93181,AL359813.23:93686..93781, FT 43457637..43457766,43465619..43465715,43466713..43466838, FT 43468482..43468510,43469264..43469425,43470021..43470087, FT 43471139..43471246,43471361..43471444,43472499..43474291) FT /gene="RP3-337H4.1" FT /locus_tag="RP3-337H4.1-007" FT /product="novel protein" FT /note="match: ESTs: Em:AA643153 Em:AA822387 Em:AI128104 FT Em:AI131226 Em:AI632823 Em:AI937823 Em:AI962638 Em:AL044198 FT Em:AL526452 Em:AL526495 Em:AW106046 Em:AW20683