ID CM000663; SV 1; linear; genomic DNA; CON; HUM; 249250621 BP. XX AC CM000663; XX PR Project:PRJNA31257; XX DT 09-MAR-2009 (Rel. 100, Created) DT 29-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Homo sapiens chromosome 1, GRCh37 primary reference assembly. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Erratum:[Nature 2001 Aug 2;412(6846):565] RP 1-249250621 RX DOI; 10.1038/35057062. RX PUBMED; 11237011. RG International Human Genome Sequencing Consortium RA Lander E.S., Linton L.M., Birren B., Nusbaum C., Zody M.C., Baldwin J., RA Devon K., Dewar K., Doyle M., FitzHugh W., Funke R., Gage D., Harris K., RA Heaford A., Howland J., Kann L., Lehoczky J., LeVine R., McEwan P., RA McKernan K., Meldrim J., Mesirov J.P., Miranda C., Morris W., Naylor J., RA Raymond C., Rosetti M., Santos R., Sheridan A., Sougnez C., RA Stange-Thomann N., Stojanovic N., Subramanian A., Wyman D., Rogers J., RA Sulston J., Ainscough R., Beck S., Bentley D., Burton J., Clee C., RA Carter N., Coulson A., Deadman R., Deloukas P., Dunham A., Dunham I., RA Durbin R., French L., Grafham D., Gregory S., Hubbard T., Humphray S., RA Hunt A., Jones M., Lloyd C., McMurray A., Matthews L., Mercer S., Milne S., RA Mullikin J.C., Mungall A., Plumb R., Ross M., Shownkeen R., Sims S., RA Waterston R.H., Wilson R.K., Hillier L.W., McPherson J.D., Marra M.A., RA Mardis E.R., Fulton L.A., Chinwalla A.T., Pepin K.H., Gish W.R., RA Chissoe S.L., Wendl M.C., Delehaunty K.D., Miner T.L., Delehaunty A., RA Kramer J.B., Cook L.L., Fulton R.S., Johnson D.L., Minx P.J., Clifton S.W., RA Hawkins T., Branscomb E., Predki P., Richardson P., Wenning S., Slezak T., RA Doggett N., Cheng J.F., Olsen A., Lucas S., Elkin C., Uberbacher E., RA Frazier M., Gibbs R.A., Muzny D.M., Scherer S.E., Bouck J.B., RA Sodergren E.J., Worley K.C., Rives C.M., Gorrell J.H., Metzker M.L., RA Naylor S.L., Kucherlapati R.S., Nelson D.L., Weinstock G.M., Sakaki Y., RA Fujiyama A., Hattori M., Yada T., Toyoda A., Itoh T., Kawagoe C., RA Watanabe H., Totoki Y., Taylor T., Weissenbach J., Heilig R., Saurin W., RA Artiguenave F., Brottier P., Bruls T., Pelletier E., Robert C., Wincker P., RA Smith D.R., Doucette-Stamm L., Rubenfield M., Weinstock K., Lee H.M., RA Dubois J., Rosenthal A., Platzer M., Nyakatura G., Taudien S., Rump A., RA Yang H., Yu J., Wang J., Huang G., Gu J., Hood L., Rowen L., Madan A., RA Qin S., Davis R.W., Federspiel N.A., Abola A.P., Proctor M.J., Myers R.M., RA Schmutz J., Dickson M., Grimwood J., Cox D.R., Olson M.V., Kaul R., RA Raymond C., Shimizu N., Kawasaki K., Minoshima S., Evans G.A., RA Athanasiou M., Schultz R., Roe B.A., Chen F., Pan H., Ramser J., RA Lehrach H., Reinhardt R., McCombie W.R., de la Bastide M., Dedhia N., RA Blocker H., Hornischer K., Nordsiek G., Agarwala R., Aravind L., RA Bailey J.A., Bateman A., Batzoglou S., Birney E., Bork P., Brown D.G., RA Burge C.B., Cerutti L., Chen H.C., Church D., Clamp M., Copley R.R., RA Doerks T., Eddy S.R., Eichler E.E., Furey T.S., Galagan J., Gilbert J.G., RA Harmon C., Hayashizaki Y., Haussler D., Hermjakob H., Hokamp K., Jang W., RA Johnson L.S., Jones T.A., Kasif S., Kaspryzk A., Kennedy S., Kent W.J., RA Kitts P., Koonin E.V., Korf I., Kulp D., Lancet D., Lowe T.M., RA McLysaght A., Mikkelsen T., Moran J.V., Mulder N., Pollara V.J., RA Ponting C.P., Schuler G., Schultz J., Slater G., Smit A.F., Stupka E., RA Szustakowski J., Thierry-Mieg D., Thierry-Mieg J., Wagner L., Wallis J., RA Wheeler R., Williams A., Wolf Y.I., Wolfe K.H., Yang S.P., Yeh R.F., RA Collins F., Guyer M.S., Peterson J., Felsenfeld A., Wetterstrand K.A., RA Patrinos A., Morgan M.J., de Jong P., Catanese J.J., Osoegawa K., RA Shizuya H., Choi S., Chen Y.J.; RT "Initial sequencing and analysis of the human genome"; RL Nature 409(6822):860-921(2001). XX RN [2] RP 1-249250621 RX DOI; 10.1038/nature03001. RX PUBMED; 15496913. RG International Human Genome Sequencing Consortium RA ; RT "Finishing the euchromatic sequence of the human genome"; RL Nature 431(7011):931-945(2004). XX RN [3] RC Erratum:[Nature. 2006 Oct 26;443(7114):1013. Banerjee, R [added]; Bryant, RC SP [added]; Burford, DC [added]; Burrill, WDH [added]; Clegg, SM [added]; RC Dhami, P [added]; Dovey, O [added]; Faulkner, LM [added]; Gribble, SM RC [added]; Langford, CF [added]; Pandian, RD [added]; Porter, KM [added]; RC Prigmore, E [added]] RP 1-249250621 RX DOI; 10.1038/nature04727. RX PUBMED; 16710414. RA Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., RA Scott C.E., Howe K.L., Woodfine K., Spencer C.C., Jones M.C., Gillson C., RA Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K., RA Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C., RA Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W., RA Ashwell R.I., Aubin K., Babbage A.K., Bagguley C.L., Bailey J., Beasley H., RA Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D., RA Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G., Clee C., RA Cobley V., Collier R.E., Corby N., Coville G.J., Davies J., Deadman R., RA Dunn M., Earthrowl M., Ellington A.G., Errington H., Frankish A., RA Frankland J., French L., Garner P., Garnett J., Gay L., Ghori M.R., RA Gibson R., Gilby L.M., Gillett W., Glithero R.J., Grafham D.V., RA Griffiths C., Griffiths-Jones S., Grocock R., Hammond S., Harrison E.S., RA Hart E., Haugen E., Heath P.D., Holmes S., Holt K., Howden P.J., Hunt A.R., RA Hunt S.E., Hunter G., Isherwood J., James R., Johnson C., Johnson D., RA Joy A., Kay M., Kershaw J.K., Kibukawa M., Kimberley A.M., King A., RA Knights A.J., Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M., RA Loveland J., Lovell J., Lush M.J., Lyne R., Martin S., RA Mashreghi-Mohammadi M., Matthews L., Matthews N.S., McLaren S., Milne S., RA Mistry S., Moore M.J., Nickerson T., O'Dell C.N., Oliver K., Palmeiri A., RA Palmer S.A., Parker A., Patel D., Pearce A.V., Peck A.I., Pelan S., RA Phelps K., Phillimore B.J., Plumb R., Rajan J., Raymond C., Rouse G., RA Saenphimmachak C., Sehra H.K., Sheridan E., Shownkeen R., Sims S., RA Skuce C.D., Smith M., Steward C., Subramanian S., Sycamore N., Tracey A., RA Tromans A., Van Helmond Z., Wall M., Wallis J.M., White S., Whitehead S.L., RA Wilkinson J.E., Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., RA Coulson A., Vaudin M., Sulston J.E., Durbin R., Hubbard T., Wooster R., RA Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V., RA Beck S., Rogers J., Bentley D.R., Banerjee R., Bryant S.P., Burford D.C., RA Burrill W.D., Clegg S.M., Dhami P., Dovey O., Faulkner L.M., Gribble S.M., RA Langford C.F., Pandian R.D., Porter K.M., Prigmore E.; RT "The DNA sequence and biological annotation of human chromosome 1"; RL Nature 441(7091):315-321(2006). XX RN [4] RP 1-249250621 RG Genome Reference Consortium RA ; RT ; RL Submitted (24-FEB-2009) to the INSDC. RL NCBI, NIH, Bethesda, MD 20892, USA XX CC The DNA sequence is composed of genomic sequence, primarily CC finished clones that were sequenced as part of the Human Genome CC Project. PCR products and WGS shotgun sequence have been added CC where necessary to fill gaps or correct errors. All such additions CC are manually curated by GRC staff. For more information see: CC http://genomereference.org. XX CO join(gap(10000),GL000001.1:1..257719,gap(50000),GL000002.1:1..153649, CO gap(50000),GL000003.1:1..3323900,gap(150000),GL000004.1:1..9224644, CO gap(100000),GL000005.1:1..16558170,gap(150000),GL000006.1:1..90908613, CO gap(150000),GL000007.1:1..398739,gap(50000),gap(3000000),gap(18000000), CO GL000008.1:1..432327,gap(150000),GL000009.1:1..426764,gap(100000), CO GL000010.1:1..126477,gap(100000),GL000011.1:1..224781,gap(50000), CO GL000012.1:1..78698,gap(50000),GL000013.1:1..347932,gap(50000), CO GL000014.1:1..3353625,gap(150000),GL000015.1:1..185320,gap(150000), CO GL000016.1:1..57411349,gap(150000),GL000017.1:1..259514,gap(150000), CO GL000018.1:1..42425989,gap(150000),GL000019.1:1..182411,gap(10000)) XX FH Key Location/Qualifiers FH FT source 1..249250621 FT /organism="Homo sapiens" FT /chromosome="1" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gap 1..10000 FT /estimated_length=10000 FT misc_feature 10754..177417 FT /note="annotated region of clone" FT CDS join(12010..12057,12179..12227,12613..12697,12975..13052, FT 13221..13374,13453..13670) FT /pseudo FT /locus_tag="RP11-34P13.1-001" FT /product="pseudogene similar to part of DEAD/H FT (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like FT helicase homolog, S. cerevisiae) (DDX11)" FT /note="match: proteins: Sw:Q96FC9 Tr:Q80YC3 Tr:Q92771" FT CDS complement(join(14404..14501,15005..15038,15796..15947, FT 16607..16765,16858..17055,17233..17368,17606..17742, FT 17915..18061,18268..18366,24738..24891,29534..29570)) FT /pseudo FT /locus_tag="RP11-34P13.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q7Z3N4" FT mRNA join(29554..30039,30564..30667,30976..31097) FT /locus_tag="RP11-34P13.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI550667.1" FT mRNA join(30267..30667,30976..31109) FT /locus_tag="RP11-34P13.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BU728571.1" FT mRNA complement(join(34554..35174,35277..35481,35721..36081)) FT /gene="FAM138A" FT /locus_tag="RP11-34P13.4-001" FT /product="family with sequence similarity 138, member A" FT /note="match: ESTs: Em:BF726774.1 Em:BQ637109.1 FT Em:BU732746.1 Em:R96138.1 Em:W96259.1" FT /note="match: cDNAs: Em:AF346307.1" FT CDS complement(join(35138..35174,35277..35481,35721..35736)) FT /gene="FAM138A" FT /locus_tag="RP11-34P13.4-001" FT /standard_name="OTTHUMP00000001143" FT /product="family with sequence similarity 138, member A" FT /protein_id="CAH72836.1" FT /translation="MLLTIETKSHYVAQAGLELLASSDPPTSASQSVGIIDMSHCTWPT FT LGKFLNPSKPHFSPITKGKDGNIFPTKFLSDALTELRLCT" FT mRNA complement(join(35245..35481,35721..36073)) FT /gene="FAM138A" FT /locus_tag="RP11-34P13.4-002" FT /product="family with sequence similarity 138, member A" FT /note="match: ESTs: Em:BM709368.1" FT CDS 62948..63887 FT /pseudo FT /locus_tag="RP11-34P13.6-001" FT /product="olfactory receptor, family 4, subfamily G, member FT 11 pseudogene" FT /note="match: proteins: Tr:Q7TQW6 Tr:Q7TQW7 Tr:Q7TQY0 FT Tr:Q7TQY7 Tr:Q8VF29 Tr:Q8VF38 Tr:Q8VF45 Tr:Q8VG12" FT mRNA 69091..70008 FT /gene="OR4F5" FT /locus_tag="RP11-34P13.5-001" FT /product="olfactory receptor, family 4, subfamily F, member FT 5" FT /note="match: ESTs: Em:AI138970.1 Em:CF147773.1" FT /note="match: cDNAs: Em:AK095468.1 Em:BC014374.1 FT Em:BC046590.1" FT CDS 69091..70008 FT /gene="OR4F5" FT /locus_tag="RP11-34P13.5-001" FT /standard_name="OTTHUMP00000001248" FT /product="olfactory receptor, family 4, subfamily F, member FT 5" FT /note="match: proteins: Sw:Q8NGA8 Sw:Q8NH21 Tr:Q7TQX6 FT Tr:Q7TQX7 Tr:Q7TQX9 Tr:Q8VF49" FT /protein_id="CAH72838.1" FT /translation="MVTEFIFLGLSDSQELQTFLFMLFFVFYGGIVFGNLLIVITVVSD FT SHLHSPMYFLLANLSLIDLSLSSVTAPKMITDFFSQRKVISFKGCLVQIFLLHFFGGSE FT MVILIAMGFDRYIAICKPLHYTTIMCGNACVGIMAVTWGIGFLHSVSQLAFAVHLLFCG FT PNEVDSFYCDLPRVIKLACTDTYRLDIMVIANSGVLTVCSFVLLIISYTIILMTIQHRP FT LDKSSKALSTLTAHITVVLLFFGPCVFIYAWPFPIKSLDKFLAVFYSVITPLLNPIIYT FT LRNKDMKTAIRQLRKWDAHSSVKF" FT mRNA complement(join(89551..90050,90287..91105)) FT /locus_tag="RP11-34P13.8-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA218639.1" FT /note="match: cDNAs: Em:BC031359.1" FT mRNA complement(join(89295..91629,92091..92240,112700..112804, FT 120775..120932)) FT /locus_tag="RP11-34P13.7-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW408533.1" FT /note="match: cDNAs: Em:AK125248.1" FT mRNA complement(join(92230..92240,112700..112804,120721..120932, FT 129055..129217)) FT /locus_tag="RP11-34P13.7-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BX281512.1" FT mRNA complement(join(110953..111357,112700..112804, FT 129055..129173)) FT /locus_tag="RP11-34P13.7-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AL731901.1 Em:BG106424.1" FT CDS 131104..133923 FT /pseudo FT /locus_tag="RP11-34P13.10-001" FT /product="capicua homolog (Drosophila) (CIC) pseudogene" FT /note="match: proteins: Sw:Q924A2 Sw:Q96RK0" FT mRNA complement(join(129081..129223,133374..133566)) FT /locus_tag="RP11-34P13.7-004" FT /product="novel transcript" FT CDS complement(join(135247..136006,137569..138039)) FT /pseudo FT /locus_tag="RP11-34P13.11-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q8N836" FT mRNA complement(join(139790..139847,140075..140339)) FT /locus_tag="RP11-34P13.14-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI020735.1" FT polyA_site complement(141474) FT polyA_signal complement(141477..141482) FT mRNA complement(join(141474..143011,146386..149707)) FT /locus_tag="RP11-34P13.12-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BX647595.1" FT mRNA complement(join(142808..143011,146386..146509, FT 146642..146831)) FT /locus_tag="RP11-34P13.12-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BF898156.1" FT mRNA join(160446..160690,161314..161525) FT /locus_tag="RP11-34P13.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW273831.1" FT mRNA complement(join(165889..165942,168100..168165, FT 168610..168767)) FT /locus_tag="RP11-34P13.13-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BF929339.1" FT mRNA complement(join(164405..164791,165884..165942, FT 168100..168165,169049..169264,172557..172688, FT 173753..173864)) FT /locus_tag="RP11-34P13.13-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC006361.2" FT misc_feature 177177 FT /note="Clone_right_end: RP11-34P13" FT gap 177418..227417 FT /estimated_length=50000 FT gap 267720..317719 FT /estimated_length=50000 FT misc_feature 317720..471368 FT /note="annotated region of clone" FT misc_feature 317720 FT /note="Clone_left_end: RP4-669L17" FT CDS join(326096..326569,327348..328112) FT /pseudo FT /locus_tag="RP4-669L17.8-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q8N836" FT CDS complement(329426..332243) FT /pseudo FT /locus_tag="RP4-669L17.9-001" FT /product="capicua homolog (Drosophila) (CIC) pseudogene" FT /note="match: proteins: Sw:Q924A2 Sw:Q924A2 Sw:Q924A2 FT Sw:Q924A2 Sw:Q924A2" FT mRNA join(329784..329976,334129..334271) FT /locus_tag="RP4-669L17.4-006" FT /product="novel transcript" FT /note="match: ESTs: Em:AW383021.1 Em:AW383060.1 FT Em:BE155728.1" FT mRNA join(334124..334297,342392..342973) FT /locus_tag="RP4-669L17.4-004" FT /product="novel transcript" FT /note="match: ESTs: Em:AL601418.1" FT mRNA join(334129..334297,350525..350629) FT /locus_tag="RP4-669L17.4-005" FT /product="novel transcript" FT /note="match: ESTs: Em:BG106424.1" FT mRNA join(334129..334297,439467..439568,446014..446155) FT /locus_tag="RP4-669L17.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA315353.1" FT mRNA join(334135..334297,342392..342603,350525..350629) FT /locus_tag="RP4-669L17.4-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BX281512.1" FT mRNA join(334179..334297,350525..350629,351972..352376) FT /locus_tag="RP4-669L17.4-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AL731901.1" FT mRNA 367659..368597 FT /gene="OR4F29" FT /locus_tag="RP4-669L17.7-001" FT /product="olfactory receptor, family 4, subfamily F, member FT 29" FT /note="match: ESTs: Em:BE893680.1 Em:BM833092.1 FT Em:CF147772.1" FT /note="match: cDNAs: Em:AF102517.1 Em:AF303373.1 FT Em:AJ459845.1 Em:AJ459847.1 Em:AK127984.1 Em:BC036097.1 FT Em:BC036097.2 Em:BC048991.1 Em:BC048991.2 Em:Y10529.1" FT CDS 367659..368597 FT /gene="OR4F29" FT /locus_tag="RP4-669L17.7-001" FT /standard_name="OTTHUMP00000002885" FT /product="olfactory receptor, family 4, subfamily F, member FT 29" FT /note="match: proteins: Sw:O95013 Tr:Q7TQW7 Tr:Q7TQX1 FT Tr:Q7TQX2 Tr:Q7TQX3 Tr:Q8NGN9 Tr:Q8VET0 Tr:Q8VET0 Tr:Q8VF47 FT Tr:Q8VG12" FT /protein_id="CAI22294.1" FT /translation="MDGENHSVVSEFLFLGLTHSWEIQLLLLVFSSVLYVASITGNILI FT VFSVTTDPHLHSPMYFLLASLSFIDLGACSVTSPKMIYDLFRKRKVISFGGCIAQIFFI FT HVVGGVEMVLLIAMAFDRYVALCKPLHYLTIMSPRMCLSFLAVAWTLGVSHSLFQLAFL FT VNLAFCGPNVLDSFYCDLPRLLRLACTDTYRLQFMVTVNSGFICVGTFFILLISYVFIL FT FTVWKHSSGGSSKALSTLSAHSTVVLLFFGPPMFVYTRPHPNSQMDKFLAIFDAVLTPF FT LNPVVYTFRNKEMKAAIKRVCKQLVIYKRIS" FT CDS complement(379130..379453) FT /pseudo FT /locus_tag="RP4-669L17.6-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q8BGW2 Sw:Q8BGW2" FT misc_feature 384967..385028 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 384967..385274 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 385972..386252 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(420206..420296,420992..421258,421396..421842) FT /locus_tag="RP4-669L17.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI462685.1 Em:BI464772.1" FT /note="match: cDNAs: Em:BC036251.2" FT misc_feature 437410..437510 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(450887..451086,453645..453942) FT /locus_tag="RP4-669L17.3-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW172999.1" FT mRNA join(453217..453318,453645..453948) FT /locus_tag="RP4-669L17.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI147429.1 Em:AI198573.1 FT Em:AI262738.1 Em:BX119452.1" FT polyA_site complement(453827) FT polyA_signal complement(453843..453848) FT mRNA join(459656..459992,461154..461288,461751..462652, FT 470907..471368) FT /locus_tag="RP4-669L17.1-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK125669.1" FT mRNA complement(join(453827..454166,460380..460465)) FT /locus_tag="RP4-669L17.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ011175.1 Em:BQ012131.1 FT Em:BQ013085.1" FT mRNA complement(join(453633..454166,460408..460480)) FT /locus_tag="RP4-669L17.2-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:N41359.1" FT mRNA join(461154..461288,461751..463850) FT /locus_tag="RP4-669L17.1-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK125248.1" FT mRNA join(465210..465339,470907..471368) FT /locus_tag="RP4-669L17.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL710649.1 Em:BQ434332.1 FT Em:R66796.1" FT /note="match: cDNAs: Em:AK127000.1" FT misc_feature 471368 FT /note="Clone_right_end: RP4-669L17" FT gap 471369..521368 FT /estimated_length=50000 FT misc_feature 566548..567016 FT /note="Single subclone region" FT misc_feature 567698..568962 FT /note="Single subclone region" FT misc_feature 569673..569678 FT /note="Single subclone region" FT misc_feature 632918..812484 FT /note="annotated region of clone" FT misc_feature 632918 FT /note="Clone_left_end: RP11-206L10" FT mRNA complement(join(637316..637720,639065..639169, FT 655412..655530)) FT /locus_tag="RP5-857K21.4-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AL731901.1" FT mRNA complement(join(639065..639169,655412..655580)) FT /locus_tag="RP5-857K21.4-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BG106424.1" FT mRNA complement(join(639065..639169,647091..647302, FT 655412..655574)) FT /locus_tag="RP5-857K21.4-006" FT /product="novel transcript" FT /note="match: ESTs: Em:BX281512.1" FT mRNA complement(join(646722..647302,655412..655580)) FT /locus_tag="RP5-857K21.4-004" FT /product="novel transcript" FT /note="match: ESTs: Em:AL601418.1" FT mRNA complement(join(AC114498.2:15448..15589, FT AC114498.2:21967..22068,655412..655580)) FT /locus_tag="RP5-857K21.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA315353.1" FT CDS 657465..660287 FT /pseudo FT /locus_tag="RP11-206L10.15-001" FT /product="capicua homolog (Drosophila) (CIC) pseudogene" FT /note="match: proteins: Sw:Q924A2" FT mRNA complement(join(655438..655580,659738..659930)) FT /locus_tag="RP5-857K21.4-005" FT /product="novel transcript" FT /note="match: ESTs: Em:AW383021.1 Em:AW383060.1 FT Em:BE155728.1" FT CDS complement(join(661611..662372,663054..663527)) FT /pseudo FT /locus_tag="RP11-206L10.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q8N836" FT mRNA complement(join(677193..678730,682075..685396)) FT /locus_tag="RP11-206L10.3-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:BX647595.1" FT mRNA join(696291..696534,697158..697369) FT /locus_tag="RP11-206L10.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW273831.1" FT mRNA complement(join(694412..694503,700103..700305)) FT /locus_tag="RP11-206L10.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW850014.1 Em:AW850063.1 FT Em:BF926381.1" FT misc_feature 704883 FT /note="Clone_right_end: RP5-857K21" FT mRNA complement(join(700237..700627,701709..701767, FT 703928..703993,704877..705092,708356..708487, FT 709551..709660,713664..714006)) FT /locus_tag="RP11-206L10.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC006361.2" FT mRNA join(714162..714472,717317..717571) FT /locus_tag="RP11-206L10.6-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA259049.1 Em:AI149958.1 FT Em:AI651532.1 Em:AI969344.1 Em:AW451940.1 Em:BF512132.1" FT mRNA join(714436..714472,739299..739602,740156..740255) FT /locus_tag="RP11-206L10.6-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI142379.1" FT mRNA join(717325..717516,719750..720070) FT /locus_tag="RP11-206L10.7-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA428463.1" FT mRNA join(740179..740346,742597..742845) FT /locus_tag="RP11-206L10.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA905379.1" FT mRNA join(740312..740346,742597..742703,745002..745440) FT /locus_tag="RP11-206L10.9-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW119138.1" FT mRNA complement(join(736259..736543,741179..741271, FT 743954..744003,745447..745541)) FT /locus_tag="RP11-206L10.8-001" FT /product="novel transcript similar to F-box only protein 25 FT (FBXO25) gene" FT /note="match: ESTs: Em:BE784712.1" FT mRNA join(752751..753582,754103..755214) FT /locus_tag="RP11-206L10.14-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:AK097327.1" FT mRNA complement(join(745489..745550,752753..753092)) FT /locus_tag="RP11-206L10.10-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI076093.1" FT polyA_site complement(761586) FT mRNA complement(761586..762902) FT /locus_tag="RP11-206L10.16-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA505478.1 Em:AI350210.1 FT Em:AW014756.1 Em:BG924626.1 Em:DA297246.1 Em:DA956382.1 FT Em:DB078514.1 Em:DB134702.1 Em:DB158420.1" FT /note="match: cDNAs: Em:AK026292.1 Em:BC017762.1" FT polyA_signal complement(761599..761604) FT CDS complement(762080..762571) FT /locus_tag="RP11-206L10.16-001" FT /standard_name="OTTHUMP00000180559" FT /product="novel protein" FT /note="match: proteins: Tr:Q9H632.1" FT /protein_id="CAM12826.1" FT /translation="MWLVFHRPHPRPSWPLRAALGFGRRQSSLRCFPVLPSARPYVSAN FT PTLRGGRLRQDPESETGVGDLPDPVTTLVLLHNRLPLAVTVGCLPSRCPTEKRAPPWQG FT LLHCLAVDVEVGQESEEKTERREVEPTSEKRGGKFRWEVDGSEEFEQTPTVKESDLSKQ FT " FT mRNA join(762988..763155,764383..764484,787307..787490, FT 788051..788146,788771..789791) FT /locus_tag="RP11-206L10.11-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC042880.1" FT mRNA join(763047..763155,764383..764484,776580..777118) FT /locus_tag="RP11-206L10.11-006" FT /product="novel transcript" FT /note="match: ESTs: Em:CB959966.1 Em:CB988070.1 FT Em:CD109802.1" FT mRNA join(763053..763155,764383..764484,783034..783186, FT 787307..787490,788051..788146,788771..789006) FT /locus_tag="RP11-206L10.11-004" FT /product="novel transcript" FT /note="match: ESTs: Em:CD050223.1 Em:CD050894.1" FT mRNA join(763079..763155,764383..764484,783034..783186, FT 787307..787490,788051..788146) FT /locus_tag="RP11-206L10.11-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK026873.1" FT mRNA join(766985..767057,776580..777400) FT /locus_tag="RP11-206L10.11-007" FT /product="novel transcript" FT /note="match: ESTs: Em:CF552554.1" FT mRNA join(783054..783186,784864..784982,787307..787490, FT 788051..788146,788771..788838) FT /locus_tag="RP11-206L10.11-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC042880.1" FT mRNA join(786728..787490,788051..788132) FT /locus_tag="RP11-206L10.11-005" FT /product="novel transcript" FT /note="match: ESTs: Em:BX415026.1" FT polyA_signal 789749..789754 FT polyA_site 789767 FT polyA_site 789772 FT polyA_site 789791 FT polyA_site complement(803451) FT polyA_signal complement(803466..803471) FT mRNA complement(join(803620..803910,804007..804055, FT 804908..804955,805466..805581)) FT /locus_tag="RP11-206L10.12-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AW474790.1" FT CDS 808672..809729 FT /pseudo FT /locus_tag="RP11-206L10.13-001" FT /product="novel pseudogene similar to the beta-tubulin FT family" FT /note="match: proteins: Sw:P11833 Sw:P30883 Sw:P68372 FT Sw:Q41782 Sw:Q99867 Sw:Q9BUF5 Tr:Q5D080 Tr:Q60455 Tr:Q86ET5 FT Tr:Q8T8B1 Tr:Q8WP12 Tr:Q949G6" FT misc_feature 809613 FT /note="Clone_left_end: RP11-54O7" FT misc_feature 811377..811395 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 811396 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1800bp by restriction digest data" FT misc_feature 811398..811451 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(803451..804055,809492..810535, FT 812126..812283)) FT /locus_tag="RP11-206L10.12-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC047940.1" FT mRNA complement(join(803783..804055,810420..810535, FT 812126..812182)) FT /locus_tag="RP11-206L10.12-002" FT /product="novel transcript" FT /note="match: ESTs: Em:W79854.1" FT misc_feature 812484 FT /note="Clone_right_end: RP11-206L10" FT misc_feature 812485..998289 FT /note="annotated region of clone" FT misc_feature 842966..843260 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT mRNA join(846815..846853,847325..850328) FT /locus_tag="RP11-54O7.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK056486.1" FT mRNA join(849551..849824,850183..850351) FT /locus_tag="RP11-54O7.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA633998.1" FT polyA_site complement(852250) FT polyA_signal complement(852271..852276) FT polyA_site complement(852953) FT polyA_signal complement(852970..852975) FT mRNA complement(join(852750..852866,853402..853914)) FT /locus_tag="RP11-54O7.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BM758684.1 Em:BM759761.1 FT Em:BM765468.1" FT mRNA complement(join(852250..853100,853402..853490, FT 854205..854295,854715..855072)) FT /locus_tag="RP11-54O7.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BU619380.1 Em:BU632785.1 FT Em:BU738526.1 Em:CA447406.1" FT mRNA join(860260..860328,861302..861393,865535..865716, FT 866419..866469,871152..871276,874420..874509, FT 874655..>874671) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-011" FT /product="sterile alpha motif domain containing 11" FT /note="match: ESTs: Em:DR731385.1" FT mRNA join(860530..860569,861302..861393,865535..865716, FT 866419..866469,871152..>871173) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-003" FT /product="sterile alpha motif domain containing 11" FT /note="match: ESTs: Em:AA427964.1" FT mRNA join(860530..860569,861302..861393,865535..865716, FT 866419..866469,871152..871168,879576..880180, FT 880422..880512) FT /locus_tag="RP11-54O7.15-001" FT /product="artefact" FT /note="match: cDNAs: Em:AF161376.1" FT mRNA join(861118..861180,861302..861393,865535..865716, FT 866419..866469,871152..871276,874420..874509, FT 874655..874840,876524..876686,877516..877631, FT 877790..877868,877939..878438,878633..878757, FT 879078..879188,879288..879955) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-010" FT /product="sterile alpha motif domain containing 11" FT /note="match: cDNAs: Em:BC033213.1" FT /note="match: ESTs: Em:AA427857.1 Em:BU688963.1 FT Em:CA396407.1 Em:CN293867.1 Em:CN342795.1 Em:DA038194.1" FT CDS join(861322..861393,865535..865716,866419..866469, FT 871152..>871173) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-003" FT /standard_name="OTTHUMP00000038429" FT /product="sterile alpha motif domain containing 11" FT /protein_id="CAI15565.2" FT /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLKK FT ERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCSQD FT GNLPT" FT CDS join(861322..861393,865535..865716,866419..866469, FT 871152..871276,874420..874509,874655..>874671) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-011" FT /standard_name="OTTHUMP00000196421" FT /product="sterile alpha motif domain containing 11" FT /protein_id="CAO03408.1" FT /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLKK FT ERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCSQD FT GNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSDCFS FT EKRARSESPQEALLLP" FT CDS join(861322..861393,865535..865716,866419..866469, FT 871152..871276,874420..874509,874655..874840, FT 876524..876686,877516..877631,877790..877868, FT 877939..878438,878633..878757,879078..879188, FT 879288..879533) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-010" FT /standard_name="OTTHUMP00000178963" FT /product="sterile alpha motif domain containing 11" FT /protein_id="CAM12827.2" FT /translation="MSKGILQVHPPICDCPGCRISSPVNRGRLADKRTVALPAARNLKK FT ERTPSFSASDGDSDGSGPTCGRRPGLKQEDGPHIRIMKRRVHTHWDVNISFREASCSQD FT GNLPTLISSVHRSRHLVMPEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSDCFS FT EKRARSESPQEALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPSHGED FT PPWHDPPHHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHREGAAP FT AAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEM FT FAWQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLV FT LNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQ FT DGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYAVSP FT YFHTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLP FT LLTEEHLLTNMGLKLGPALKIRAQVARRLGRVFYVASFPVALPLQPPTLRAPERELGTG FT EQPLSPTTATSPYGGGHALAGQTSPKQENGTLALLPGAPDPSQPLC" FT CDS join(<865692..865716,866419..866469,871152..871276, FT 874420..874509,874655..874792,876524..876686, FT 877516..877631,877790..877868,877939..878438, FT 878633..878757,879078..879188,879288..879533) FT /codon_start=3 FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-001" FT /standard_name="OTTHUMP00000038427" FT /product="sterile alpha motif domain containing 11" FT /protein_id="CAI15564.3" FT /translation="HIRIMKRRVHTHWDVNISFREASCSQDGNLPTLISSVHRSRHLVM FT PEHQSRCEFQRGSLEIGLRPAGDLLGKRLGRSPRISSDCFSEKRARSESPQEALLLPRE FT LGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPSHDLLRVRQEVAAAALRGPSGLE FT AHLPSSTAGQRRKQGLAQHREGAAPAAAPSFSERELPQPPPLLSPQNAPHVALGPHLRP FT PFLGVPSALCQTPGYGFLPPAQAEMFAWQQELLRKQNLARLELPADLLRQKELESARPQ FT LLAPETALRPNDGAEELQRRGALLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPR FT KGGPGPASARPSESKEMTGARLWAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAG FT GAGAEGKGLFPGSTLPLGFPYAVSPYFHTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSF FT VGGLSGCGEYTRVFREQGIDGETLPLLTEEHLLTNMGLKLGPALKIRAQVARRLGRVFY FT VASFPVALPLQPPTLRAPERELGTGEQPLSPTTATSPYGGGHALAGQTSPKQENGTLAL FT LPGAPDPSQPLC" FT mRNA join(<865692..865716,866419..866469,871152..871276, FT 874420..874509,874655..874792,876524..876686, FT 877516..877631,877790..877868,877939..878438, FT 878633..878757,879078..879188,879288..879955) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-001" FT /product="sterile alpha motif domain containing 11" FT /note="match: cDNAs: Em:BC024295.2" FT /note="match: ESTs: Em:CA389330.1 Em:CD672892.1" FT misc_feature 868799..869139 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone" FT misc_feature 869139 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 170bp by restriction digest data" FT misc_feature 869139..869146 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone" FT CDS join(<874655..874840,876524..876686,877516..877631, FT 877790..877868,877939..878438,878633..878757, FT 879078..879533) FT /codon_start=3 FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-004" FT /standard_name="OTTHUMP00000038430" FT /product="sterile alpha motif domain containing 11" FT /protein_id="CAI15563.3" FT /translation="ALLLPRELGPSMAPEDHYRRLVSALSEASTFEDPQRLYHLGLPSH FT GEDPPWHDPPHHLPSHDLLRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHREG FT AAPAAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFLGVPSALCQTPGYGFLPPAQ FT AEMFAWQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGA FT LLVLNHGAAPLLALPPQGPPGSGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARL FT WAQDGSEDEPPKDSDGEDPETAAVGCRGPTPGQAPAGGAGAEGKGLFPGSTLPLGFPYA FT VSPYFHTGAVGGLSMDGEEAPAPEDVTKWTVDDVCSFVGGLSGCGEYTRVFREQGIDGE FT TLPLLTEEHLLTNMGLKLGPALKIRAQVRRWGVRSGSPDHSWAESSGWVCDSPHQAISL FT QVARRLGRVFYVASFPVALPLQPPTLRAPERELGTGEQPLSPTTATSPYGGGHALAGQT FT SPKQENGTLALLPGAPDPSQPLC" FT mRNA join(<874655..874840,876524..876686,877516..877631, FT 877790..877868,877939..878438,878633..878757, FT 879078..879639) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-004" FT /product="sterile alpha motif domain containing 11" FT /note="match: cDNAs: Em:AK054643.1" FT mRNA join(875726..875842,876524..876686,877516..877553) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-006" FT /product="sterile alpha motif domain containing 11" FT /note="match: ESTs: Em:BI193996.1" FT mRNA join(876456..876686,877516..877631,877790..877868, FT 877939..878374) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-007" FT /product="sterile alpha motif domain containing 11" FT /note="match: ESTs: Em:BX426872.1" FT mRNA join(877483..877631,877790..878182) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-008" FT /product="sterile alpha motif domain containing 11" FT /note="match: ESTs: Em:BU192580.1" FT mRNA join(877546..877868,877939..878272) FT /gene="SAMD11" FT /locus_tag="RP11-54O7.4-009" FT /product="sterile alpha motif domain containing 11" FT /note="match: ESTs: Em:BM906851.1" FT polyA_site complement(879596) FT polyA_signal complement(879611..879616) FT polyA_signal 879937..879942 FT polyA_signal 879944..879949 FT polyA_site 879955 FT mRNA complement(join(880699..880802,880898..880942)) FT /gene="NOC2L" FT /locus_tag="RP11-54O7.5-002" FT /product="nucleolar complex associated 2 homolog (S. FT cerevisiae)" FT /note="match: ESTs: Em:BF351754.1 Em:BF351773.1" FT mRNA complement(join(879584..880180,880422..880526, FT 880898..881033,881553..881666,881782..882440)) FT /gene="NOC2L" FT /locus_tag="RP11-54O7.5-003" FT /product="nucleolar complex associated 2 homolog (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK092491.1 Em:AX747569.1" FT mRNA complement(join(879585..880180,880422..880526, FT 880898..881033,881553..881666,881782..881925, FT 883511..883612,883870..883983,886507..886618, FT 887380..887519,887792..887980,888555..888668, FT 889162..889272,889384..889903,891303..891393, FT 891475..891595,892274..892405,892479..893838)) FT /gene="NOC2L" FT /locus_tag="RP11-54O7.5-005" FT /product="nucleolar complex associated 2 homolog (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK022756.1 Em:BX648399.1" FT mRNA complement(join(879584..880180,880437..880526, FT 880898..881033,881553..881666,881782..881925, FT 883511..883612,883870..883983,886507..886618, FT 887380..887519,887792..887980,888555..888668, FT 889162..889272,889384..889462,891303..891393, FT 891475..891595,892274..892405,892479..892653, FT 894309..894461,894595..894670)) FT /gene="NOC2L" FT /locus_tag="RP11-54O7.5-001" FT /product="nucleolar complex associated 2 homolog (S. FT cerevisiae)" FT /note="match: ESTs: Em:AL526148.2 Em:AL529521.2 FT Em:AW806654.1 Em:BG681166.1 Em:BG699598.1 Em:BI857073.1 FT Em:BM466561.1 Em:BM834908.1 Em:BX387121.1 Em:BX403577.1 FT Em:BX403917.1 Em:BX410129.1 Em:CB147452.1" FT /note="match: cDNAs: Em:AK024284.1 Em:AL050019.1 FT Em:BC003555.1" FT CDS complement(join(880074..880180,880437..880526, FT 880898..881033,881553..881666,881782..881925, FT 883511..883612,883870..883983,886507..886618, FT 887380..887519,887792..887980,888555..888668, FT 889162..889272,889384..889462,891303..891393, FT 891475..891595,892274..892405,892479..892653, FT 894309..894461,894595..894620)) FT /gene="NOC2L" FT /locus_tag="RP11-54O7.5-001" FT /standard_name="OTTHUMP00000038432" FT /product="nucleolar complex associated 2 homolog (S. FT cerevisiae)" FT /note="match: proteins: Sw:Q9WV70 Sw:Q9Y3T9 Tr:Q8BHX6" FT /protein_id="CAI15568.1" FT /translation="MAAAGSRKRRLAELTVDEFLASGFDSESESESENSPQAETREARE FT AARSPDKPGGSPSASRRKGRASEHKDQLSRLKDRDPEFYKFLQENDQSLLNFSDSDSSE FT EEEGPFHSLPDVLEEASEEEDGAEEGEDGDRVPRGLKGKKNSVPVTVAMVERWKQAAKQ FT RLTPKLFHEVVQAFRAAVATTRGDQESAEANKFQVTDSAAFNALVTFCIRDLIGCLQKL FT LFGKVAKDSSRMLQPSSSPLWGKLRVDIKAYLGSAIQLVSCLSETTVLAAVLRHISVLV FT PCFLTFPKQCRMLLKRMVIVWSTGEESLRVLAFLVLSRVCRHKKDTFLGPVLKQMYITY FT VRNCKFTSPGALPFISFMQWTLTELLALEPGVAYQHAFLYIRQLAIHLRNAMTTRKKET FT YQSVYNWQYVHCLFLWCRVLSTAGPSEALQPLVYPLAQVIIGCIKLIPTARFYPLRMHC FT IRALTLLSGSSGAFIPVLPFILEMFQQVDFNRKPGRMSSKPINFSVILKLSNVNLQEKA FT YRDGLVEQLYDLTLEYLHSQAHCIGFPELVLPVVLQLKSFLRECKVANYCRQVQQLLGK FT VQENSAYICSRRQRVSFGVSEQQAVEAWEKLTREEGTPLTLYYSHWRKLRDREIQLEIS FT GKERLEDLNFPEIKRRKMADRKDEDRKQFKDLFDLNSSEEDDTEGFSERGILRPLSTRH FT GVEDDEEDEEEGEEDSSNSEDGDPDAEAGLAPGELQQLAQGPEDELEDLQLSEDD" FT mRNA complement(join(889806..889903,891303..891393, FT 891475..891595,892274..892405,892479..892653, FT 894309..894461,894595..894689)) FT /gene="NOC2L" FT /locus_tag="RP11-54O7.5-006" FT /product="nucleolar complex associated 2 homolog (S. FT cerevisiae)" FT /note="match: ESTs: Em:BI828140.1" FT mRNA complement(join(893626..894461,894595..894636)) FT /gene="NOC2L" FT /locus_tag="RP11-54O7.5-004" FT /product="nucleolar complex associated 2 homolog (S. FT cerevisiae)" FT /note="match: ESTs: Em:BF675515.1" FT /note="match: cDNAs: Em:BC009786.1" FT misc_feature 895537..895706 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(895967..896180,896673..896932,897009..897130, FT 897206..897427,897735..897851,898084..898297, FT 898489..898633,898717..898884,899300..899388, FT 899487..899560,899729..899910,900343..901095) FT /gene="KLHL17" FT /locus_tag="RP11-54O7.6-001" FT /product="kelch-like 17 (Drosophila)" FT /note="match: ESTs: Em:BX108296.1 Em:BX334204.1 FT Em:BX350590.1 Em:BX401602.1 Em:BX402912.1 Em:CA449970.1" FT /note="match: cDNAs: Em:AF505655.1 Em:AY423763.1 FT Em:BC033192.1" FT mRNA join(895967..896085,897009..897130,897206..897427, FT 897735..897851,898084..898297,898489..898633, FT 898717..898884,899300..899388,899487..899560, FT 899729..899910,900343..901095) FT /gene="KLHL17" FT /locus_tag="RP11-54O7.6-002" FT /product="kelch-like 17 (Drosophila)" FT /note="match: cDNAs: Em:AK127585.1" FT CDS join(896074..896180,896673..896932,897009..897130, FT 897206..897427,897735..897851,898084..898297, FT 898489..898633,898717..898884,899300..899388, FT 899487..899560,899729..899910,900343..900571) FT /gene="KLHL17" FT /locus_tag="RP11-54O7.6-001" FT /standard_name="OTTHUMP00000038433" FT /product="kelch-like 17 (Drosophila)" FT /note="match: proteins: Sw:Q8K430 Tr:Q6TDP3 Tr:Q6TDP4" FT /protein_id="CAI15569.1" FT /translation="MQPRSERPAGRTQSPEHGSPGPGPEAPPPPPPQPPAPEAERTRPR FT QARPAAPMEGAVQLLSREGHSVAHNSKRHYHDAFVAMSRMRQRGLLCDIVLHVAAKEIR FT AHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALDQLVQFAYTAEIVVGEGNVQ FT TLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADAHSCSDLLKAAHRYVLQHFV FT DVAKTEEFMLLPLKQVLELVSSDSLNVPSEEEVYRAVLSWVKHDVDARRQHVPRLMKCV FT RLPLLSRDFLLGHVDAESLVRHHPDCKDLLIEALKFHLLPEQRGVLGTSRTRPRRCEGA FT GPVLFAVGGGSLFAIHGDCEAYDTRTDRWHVVASMSTRRARVGVAAVGNRLYAVGGYDG FT TSDLATVESYDPVTNTWQPEVSMGTRRSCLGVAALHGLLYSAGGYDGASCLNSAERYDP FT LTGTWTSVAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQVNVWSPVASML FT SRRSSAGVAVLEGALYVAGGNDGTSCLNSVERYSPKAGAWESVAPMNIRRSTHDLVAMD FT GWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLELLNFPPPSSPTL FT SVSSTSL" FT mRNA join(896829..897130,897206..897858) FT /gene="KLHL17" FT /locus_tag="RP11-54O7.6-003" FT /product="kelch-like 17 (Drosophila)" FT /note="match: ESTs: Em:BM547948.1" FT /note="match: cDNAs: Em:BC045768.1" FT mRNA join(898107..898297,898412..898633,898717..898884, FT 899300..899388,899487..899547,899729..899910) FT /gene="KLHL17" FT /locus_tag="RP11-54O7.6-004" FT /product="kelch-like 17 (Drosophila)" FT /note="match: ESTs: Em:AL536811.2" FT mRNA join(898932..899388,899487..899544) FT /gene="KLHL17" FT /locus_tag="RP11-54O7.6-005" FT /product="kelch-like 17 (Drosophila)" FT /note="match: ESTs: Em:BM847622.1 Em:BM849888.1" FT misc_feature 899097 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 80bp by restriction digest data" FT polyA_signal 901074..901079 FT polyA_site 901094 FT mRNA join(901877..901994,902084..902183,905657..905803, FT 905901..905981,906066..906138,906259..906386, FT 906493..906588,906704..906784,907455..907530, FT 907668..907804,908241..908390,908566..908706, FT 908880..909020,909213..909431,909696..909744, FT 909822..910488) FT /gene="PLEKHN1" FT /locus_tag="RP11-54O7.7-001" FT /product="pleckstrin homology domain containing, family N FT member 1" FT /note="match: cDNAs: Em:AL136730.1" FT CDS join(901912..901994,902084..902183,905657..905803, FT 905901..905981,906066..906138,906259..906386, FT 906493..906588,906704..906784,907455..907530, FT 907668..907804,908241..908390,908566..908706, FT 908880..909020,909213..909431,909696..909744, FT 909822..909955) FT /gene="PLEKHN1" FT /locus_tag="RP11-54O7.7-001" FT /standard_name="OTTHUMP00000038447" FT /product="pleckstrin homology domain containing, family N FT member 1" FT /note="match: proteins: Tr:Q9H0M7" FT /protein_id="CAI15570.1" FT /translation="MGNSHCVPQAPRRLRASFSRKPSLKGNREDSARMSAGLPGPEAAR FT SGDAAANKLFHYIPGTDILDLENQRENLEQPFLSVFKKGRRRVPVRNLGKVVHYAKVQL FT RFQHSQDVSDCYLELFPAHLYFQAHGSEGLTFQGLLPLTELSVCPLEGSREHAFQITGP FT LPAPLLVLCPSRAELDRWLYHLEKQTALLGGPRRCHSAPPQRRLTRLRTASGHEPGGSA FT VCASRVKLQHLPAQEQWDRLLVLYPTSLAIFSEELDGLCFKGELPLRAVHINLEEKEKQ FT IRSFLIEGPLINTIRVVCASYEDYGHWLLCLRAVTHREGAPPLPGAESFPGSQVMGSGR FT GSLSSGGQTSWDSGCLAPPSTRTSHSLPESSVPSTVGCSSQHTPDQANSDRASIGRRRT FT ELRRSGSSRSPGSKARAEGRGPVTPLHLDLTQLHRLSLESSPDAPDHTSETSHSPLYAD FT PYTPPATSHRRVTDVRGLEEFLSAMQSARGPTPSSPLPSVPVSVPASDPRSCSSGPAGP FT YLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSSAREGSPEPWLPLTDGRSPRRSR FT DPGYDHLWDETLSSSHQKCPQLGGPEASGGLVQWI" FT mRNA join(906255..906386,906457..906588,906704..906903) FT /gene="PLEKHN1" FT /locus_tag="RP11-54O7.7-002" FT /product="pleckstrin homology domain containing, family N FT member 1" FT /note="match: ESTs: Em:BX280832.1" FT mRNA join(908892..909020,909213..909431,909696..909744, FT 909822..909968,911092..911245) FT /gene="PLEKHN1" FT /locus_tag="RP11-54O7.7-003" FT /product="pleckstrin homology domain containing, family N FT member 1" FT /note="match: ESTs: Em:BQ888342.1" FT polyA_site complement(910585) FT polyA_signal complement(910597..910602) FT mRNA complement(join(910585..911649,911879..912021)) FT /gene="C1orf170" FT /locus_tag="RP11-54O7.8-002" FT /product="chromosome 1 open reading frame 170" FT /note="match: cDNAs: Em:BC006300.2" FT CDS complement(join(911552..911649,911879..912004, FT 914261..916037,916517..916546)) FT /gene="C1orf170" FT /locus_tag="RP11-54O7.8-001" FT /standard_name="OTTHUMP00000038448" FT /product="chromosome 1 open reading frame 170" FT /note="match: proteins: Tr:Q6ZVZ7.1" FT /protein_id="CAI15571.2" FT /translation="MEPRGGGSSQFSSCPGPASSGDQMQRLLQGPAPRPPGEPPGSPKS FT PGHSTGSQRPPDSPGAPPRSPSRKKRRAVGAKGGGHTGASASAQTGSPLLPAASPETAK FT LMAKAGQEELGPGPAGAPEPGPRSPVQEDRPGPGLGLSTPVPVTEQGTDQIRTPRRAKL FT HTVSTTVWEALPDVSRAKSDMAVSTPASEPQPDRDMAVSTPASEPQSDRDMAVSTPASE FT PQPDTDMAVSTPASEPQPDRDMAVSIPASKPQSDTAVSTPASEPQSSVALSTPISKPQL FT DTDVAVSTPASKHGLDVALPTAGPVAKLEVASSPPVSEAVPRMTESSGLVSTPVPRADA FT AGLAWPPTRRAGPDVVEMEAVVSEPSAGAPGCCSGAPALGLTQVPRKKKVRFSVAGPSP FT NKPGSGQASARPSAPQTATGAHGGPGAWEAVAVGPRPHQPRILKHLPRPPPSAVTRVGP FT GSSFAVTLPEAYEFFFCDTIEENEEAEAAAAGQDPAGVQWPDMCEFFFPDVGAQRSRRR FT GSPEPLPRADPVPAPIPGDPVPISIPEVYEHFFFGEDRLEGVLGPAVPLPLQALEPPRS FT ASEGAGPGTPLKPAVVERLHLALRRAGELRGPVPSFAFSQNDMCLVFVAFATWAVRTSD FT PHTPDAWKTALLANVGTISAIRYFRRQVGQGRRSHSPSPSS" FT mRNA complement(join(910584..911649,911879..912004, FT 914261..916037,916517..916553,917445..917473)) FT /gene="C1orf170" FT /locus_tag="RP11-54O7.8-001" FT /product="chromosome 1 open reading frame 170" FT /note="match: cDNAs: Em:AK123855.1 Em:BC006300.2" FT misc_feature 927271 FT /note="Clone_left_end: RP11-465B22" FT polyA_site complement(934342) FT polyA_site complement(934344) FT mRNA complement(join(934346..934812,934906..935476)) FT /gene="HES4" FT /locus_tag="RP11-54O7.9-003" FT /product="hairy and enhancer of split 4 (Drosophila)" FT /note="match: ESTs: Em:AL538352.2 Em:BX339786.1 FT Em:BX460194.1" FT mRNA complement(join(934342..934812,934906..934993, FT 935072..935552)) FT /gene="HES4" FT /locus_tag="RP11-54O7.9-002" FT /product="hairy and enhancer of split 4 (Drosophila)" FT /note="match: ESTs: Em:BI602134.1 Em:BI757407.1 FT Em:BU165372.1 Em:BX418442.1" FT mRNA complement(join(934344..934812,934906..934993, FT 935072..935167,935246..935491)) FT /gene="HES4" FT /locus_tag="RP11-54O7.9-001" FT /product="hairy and enhancer of split 4 (Drosophila)" FT /note="match: ESTs: Em:AW161193.1 Em:BF967325.1 FT Em:BG325949.1 Em:BG336005.1 Em:BI834315.1 Em:BU526956.1 FT Em:BX281754.1 Em:BX437172.1" FT /note="match: cDNAs: Em:AB048791.1 Em:BC012351.1" FT CDS complement(join(934439..934812,934906..934993, FT 935072..935167,935246..935353)) FT /gene="HES4" FT /locus_tag="RP11-54O7.9-001" FT /standard_name="OTTHUMP00000038449" FT /product="hairy and enhancer of split 4 (Drosophila)" FT /note="match: proteins: Sw:P35428 Sw:Q9HCC6 Tr:Q6PBD4" FT /protein_id="CAI15572.1" FT /translation="MAADTPGKPSASPMAGAPASASRTPDKPRSAAEHRKSSKPVMEKR FT RRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTAALSADP FT AVLGKYRAGFHECLAEVNRFLAGCEGVPADVRSRLLGHLAACLRQLGPSRRPASLSPAA FT PAEAPAPEVYAGRPLLPSLGGPFPLLAPPLLPGLTRALPAAPRAGPQGPGGPWRPWLR" FT CDS complement(943454..943609) FT /pseudo FT /locus_tag="RP11-54O7.10-001" FT /product="ribosomal protein L39 (RPL39) pseudogene" FT /note="match: proteins: Sw:P62893 Sw:Q90YS9 Sw:Q96EH5 FT Sw:Q98TF5 Tr:P62893 Tr:Q711N8 Tr:Q8ISP8 Tr:Q9CQD0" FT mRNA complement(join(947377..947570,948297..948573)) FT /locus_tag="RP11-54O7.11-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW007933.1 Em:AW008651.1" FT mRNA join(948803..948956,949364..949920) FT /gene="ISG15" FT /locus_tag="RP11-54O7.12-001" FT /product="ISG15 ubiquitin-like modifier" FT /note="match: ESTs: Em:AA191138.1 Em:BE409548.1 FT Em:BE902057.1 Em:BG713896.1 Em:BM712238.1 Em:BQ050884.1 FT Em:BU194879.1 Em:BU599914.1 Em:CB995739.1 Em:CB995885.1 FT Em:CB997248.1 Em:CD174495.1" FT /note="match: cDNAs: Em:BC009507.2 Em:M13755.1" FT CDS join(948954..948956,949364..949858) FT /gene="ISG15" FT /locus_tag="RP11-54O7.12-001" FT /standard_name="OTTHUMP00000038464" FT /product="ISG15 ubiquitin-like modifier" FT /note="match: proteins: Sw:P05161" FT /protein_id="CAI15574.1" FT /translation="MGWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRL FT AVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTV FT AHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGGGTEPGG FT RS" FT polyA_signal 949897..949902 FT polyA_site 949920 FT mRNA join(955503..955753,957581..957842,970657..970704, FT 976045..976260,976553..976777,976858..977082, FT 977336..977542,978619..978837,978918..979112, FT 979203..979403,979489..979637,979714..979819, FT 980541..980657,980739..980903,981113..981256, FT 981344..981468,981540..981645,981777..982115, FT 982200..982337,982707..982834,982953..983067, FT 983156..983275,983392..983745,984247..984439, FT 984616..984831,984946..985175,985283..985417, FT 985613..985709,985807..985971,986106..986217, FT 986633..986749,986833..987025,987108..987195, FT 989133..989357,989828..989931,990204..991496) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-001" FT /product="agrin" FT /note="match: ESTs: Em:AI424797.1 Em:AI567421.1 FT Em:AI699825.1 Em:AI830565.1 Em:AI885813.1 Em:AL553989.2 FT Em:AU117941.1 Em:AW204172.1 Em:BE222945.1 Em:BE781411.1 FT Em:BI766319.1 Em:BM047996.1 Em:BM547702.1 Em:BM928313.1 FT Em:BU529054.1 Em:BU541184.1 Em:BX431138.1 Em:CK000909.1 FT Em:CN314674.1" FT /note="match: cDNAs: Em:AB191264.1 Em:AF016903.1 FT Em:AF250032.1 Em:BC007649.1 Em:BC063620.1 Em:U84406.1 FT Em:U84407.1" FT CDS join(955553..955753,957581..957842,970657..970704, FT 976045..976260,976553..976777,976858..977082, FT 977336..977542,978619..978837,978918..979112, FT 979203..979403,979489..979637,979714..979819, FT 980541..980657,980739..980903,981113..981256, FT 981344..981468,981540..981645,981777..982115, FT 982200..982337,982707..982834,982953..983067, FT 983156..983275,983392..983745,984247..984439, FT 984616..984831,984946..985175,985283..985417, FT 985613..985709,985807..985971,986106..986217, FT 986633..986749,986833..987025,987108..987195, FT 989133..989357,989828..989931,990204..990361) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-001" FT /standard_name="OTTHUMP00000038465" FT /product="agrin" FT /note="match: proteins: Sw:O00468 Sw:P25304 Tr:Q6PCM6" FT /protein_id="CAI15575.2" FT /translation="MAGRSHPGPLRPLLPLLVVAACVLPGAGGTCPERALERREEEANV FT VLTGTVEEILNVDPVQHTYSCKVRVWRYLKGKDLVARESLLDGGNKVVISGFGDPLICD FT NQVSTGDTRIFFVNPAPPYLWPAHKNELMLNSSLMRITLRNLEEVEFCVEDKPGTHFTP FT VPPTPPDACRGMLCGFGAVCEPNAEGPGRASCVCKKSPCPSVVAPVCGSDASTYSNECE FT LQRAQCSQQRRIRLLSRGPCGSRDPCSNVTCSFGSTCARSADGLTASCLCPATCRGAPE FT GTVCGSDGADYPGECQLLRRACARQENVFKKFDGPCDPCQGALPDPSRSCRVNPRTRRP FT EMLLRPESCPARQAPVCGDDGVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPEPC FT RFNAVCLSRRGRPRCSCDRVTCDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQ FT GPCDQAPSPCLGVQCAFGATCAVKNGQAACECLQACSSLYDPVCGSDGVTYGSACELEA FT TACTLGREIQVARKGPCDRCGQCRFGALCEAETGRCVCPSECVALAQPVCGSDGHTYPS FT ECMLHVHACTHQISLHVASAGPCETCGDAVCAFGAVCSAGQCVCPRCEHPPPGPVCGSD FT GVTYGSACELREAACLQQTQIEEARAGPCEQAECGSGGSGSGEDGDCEQELCRQRGGIW FT DEDSEDGPCVCDFSCQSVPGSPVCGSDGVTYSTECELKKARCESQRGLYVAAQGACRGP FT TFAPLPPVAPLHCAQTPYGCCQDNITAARGVGLAGCPSACQCNPHGSYGGTCDPATGQC FT SCRPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQGAVRDDCEQMTGLCSCKPG FT VAGPKCGQCPDGRALGPAGCEADASAPATCAEMRCEFGARCVEESGSAHCVCPMLTCPE FT ANATKVCGSDGVTYGNECQLKTIACRQGLQISIQSLGPCQEAVAPSTHPTSASVTVTTP FT GLLLSQALPAPPGALPLAPSSTAHSQTTPPPSSRPRTTASVPRTTVWPVLTVPPTAPSP FT APSLVASAFGESGSTDGSSDEELSGDQEASGGGSGGLEPLEGSSVATPGPPVERASCYN FT SALGCCSDGKTPSLDAEGSNCPATKVFQGVLELEGVEGQELFYTPEMADPKSELFGETA FT RSIESTLDDLFRNSDVKKDFRSVRLRDLGPGKSVRAIVDVHFDPTTAFRAPDVARALLR FT QIQVSRRRSLGVRRPLQEHVRFMDFDWFPAFITGATSGAIAAGATARATTASRLPSSAV FT TPRAPHPSHTSQPVAKTTAAPTTRRPPTTAPSRVPGRRPPAPQQPPKPCDSQPCFHGGT FT CQDWALGGGFTCSCPAGRGGAVCEKVLGAPVPAFEGRSFLAFPTLRAYHTLRLALEFRA FT LEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGSGPAVLTSAVPVEPGQWHRLELSR FT HWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPEDQAAVALERTFVGAGLRGCI FT RLLDVNNQRLELGIGPGAATRGSGVGECGDHPCLPNPCHGGAPCQNLEAGRFHCQCPPG FT RVGPTCADEKSPCQPNPCHGAAPCRVLPEGGAQCECPLGREGTFCQTASGQDGSGPFLA FT DFNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALRD FT RRLEFRYDLGKGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVLGESPVPHTV FT LNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSLGGRQLLTPEHVLRQVDVTSFAG FT HPCTRASGHPCLNGASCVPREAAYVCLCPGGFSGPHCEKGLVEKSAGDVDTLAFDGRTF FT VEYLNAVTESEKALQSNHFELSLRTEATQGLVLWSGKATERADYVALAIVDGHLQLSYN FT LGSQPVVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSSPLGATQLDTDGALW FT LGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPELRPCPTP" FT mRNA join(969486..970083,970657..970704,976045..976105) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-002" FT /product="agrin" FT /note="match: ESTs: Em:AI805141.1" FT mRNA join(970247..970704,976045..976260,976553..976777) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-003" FT /product="agrin" FT /note="match: ESTs: Em:BX460729.1" FT mRNA join(980779..980903,981113..981256,981344..981468, FT 981540..981729) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-004" FT /product="agrin" FT /note="match: ESTs: Em:BI914084.1" FT mRNA join(982581..982834,982953..983067,983156..983245) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-005" FT /product="agrin" FT /note="match: ESTs: Em:AI569014.1 Em:AI656280.1 FT Em:AW190843.1" FT mRNA join(982855..983067,983156..983218) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-006" FT /product="agrin" FT /note="match: ESTs: Em:AW170503.1 Em:AW195409.1" FT mRNA join(983909..984439,984616..984774) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-007" FT /product="agrin" FT /note="match: ESTs: Em:AL045509.1" FT mRNA join(<985936..985971,986106..986217,986412..986423, FT 986633..986749,986833..987025,987108..987195, FT 987373..987396,988841..988873,989133..>989330) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-009" FT /product="agrin" FT /note="match: ESTs: Em:BI912916.1" FT CDS join(<985936..985971,986106..986217,986412..986423, FT 986633..986749,986833..987025,987108..987195, FT 987373..987396,988841..988873,989133..>989330) FT /codon_start=2 FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-009" FT /standard_name="OTTHUMP00000038923" FT /product="agrin" FT /protein_id="CAI15576.1" FT /translation="RYDLGKGAAVIRSREPVTLGAWTRVSLERNGRKGALRVGDGPRVL FT GESPKSRKVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSLGGRQLLTPE FT HVLRQVDVTSFAGHPCTRASGHPCLNGASCVPREAAYVCLCPGGFSGPHCEKGLVEKSA FT GDVDTLAFDGRTFVEYLNAVTESELANEIPVPETLDSGALHSEKALQSNHFELSLRTEA FT TQGLVLWSGKATERADYVALAIVDGHLQLSYNLGSQPVVLRSTVPVNT" FT mRNA join(987366..989357,989828..989931,990204..991492) FT /gene="AGRN" FT /locus_tag="RP11-54O7.13-008" FT /product="agrin" FT /note="match: cDNAs: Em:AK128761.1" FT mRNA join(990413..990595,991278..991496) FT /locus_tag="RP11-54O7.14-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM991197.1" FT polyA_signal 991474..991479 FT polyA_site 991496 FT mRNA join(995114..995226,995660..995773,AL390719.47:2170..2292, FT AL390719.47:4921..5547) FT /locus_tag="RP11-465B22.1-005" FT /product="novel transcript" FT /note="match: ESTs: Em:BI601978.1" FT /note="match: cDNAs: Em:BC033949.2" FT mRNA join(996400..996497,AL390719.47:2170..2292, FT AL390719.47:4921..5096) FT /locus_tag="RP11-465B22.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BM141900.1 Em:BM142081.1" FT misc_feature 997335 FT /note="Clone_right_end: RP11-54O7" FT mRNA join(997588..998188,AL390719.47:2152..2379) FT /locus_tag="RP11-465B22.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ918895.1" FT misc_feature 998290..1127268 FT /note="annotated region of clone" FT misc_feature 998246..998300 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 998357..998362 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data. Sequence FT from uni-directional dGTP big dye terminator reads only" FT misc_feature 998362 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 170bp by restriction digest data" FT misc_feature 998363..998368 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data. Sequence FT from uni-directional dGTP big dye terminator reads only" FT misc_feature 998369..998559 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT CDS join(998456..998579,998860..998946,999590..999781, FT 999870..999969,1000732..1000855,1001967..1002047, FT 1002946..1003026,1003249..1003383,1003957..1004104, FT 1004588..1004735) FT /pseudo FT /locus_tag="RP11-465B22.3-001" FT /product="protein tyrosine phosphatase family pseudogene" FT /note="match: proteins: Sw:P29350 Sw:P29351 Sw:P35235 FT Sw:P41499 Sw:P81718 Sw:Q06124 Tr:P29350 Tr:Q53XS4 Tr:Q7ZW17 FT Tr:Q92124 Tr:Q9CT18 Tr:Q9UK67" FT mRNA join(998459..998581,1001210..1001836) FT /locus_tag="RP11-465B22.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF035622.1 Em:BI601978.1" FT /note="match: cDNAs: Em:BC033949.2" FT misc_feature 998560..998574 FT /note="Sequence generated from a transposon library derived FT from a single pUC clone. Assembly consistent with FT restriction digest data. Sequence from uni-directional dGTP FT big dye terminator reads only" FT misc_feature 998575..998589 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT misc_feature 999236..999311 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 999648..999817 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(999875..999969,1001210..1001654) FT /locus_tag="RP11-465B22.1-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BF210831.1 Em:CB045859.1" FT mRNA join(999898..999969,1001329..1001821) FT /locus_tag="RP11-465B22.1-004" FT /product="novel transcript" FT /note="match: ESTs: Em:BM129400.1 Em:BM129687.1" FT polyA_site 1001836 FT misc_feature 1002241..1002424 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT polyA_site complement(1017198) FT polyA_site complement(1017203) FT polyA_signal complement(1017218..1017223) FT mRNA complement(join(1017526..1017633,1017984..1018367, FT 1019295..1019452)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-014" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:CD675255.1" FT mRNA complement(join(1017205..1019886,1021258..1021392, FT 1022519..1023016)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-006" FT /product="chromosome 1 open reading frame 159" FT /note="match: cDNAs: Em:AK128271.1" FT CDS complement(join(1018273..1018367,1019295..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026256..1026363, FT 1026852..1026923)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-002" FT /standard_name="OTTHUMP00000000807" FT /product="chromosome 1 open reading frame 159" FT /note="match: proteins: Sw:Q96HA4.2" FT /protein_id="CAI14318.1" FT /translation="MALRHLALLAGLLVGVASKSMENTVTRNSTAVINTQAEGTLSPPG FT LSSLPVVREWALTHTAQLPECCVDVVGVNASCPGASLCGPGCYRRWNADGSASCVRCGN FT GTLPAYNGSECRSFAGPGAPFPMNRSSGTPGRPHPGAPRVAASLFLGTFFISSGLILSV FT AGFFYLKRSSKLPRACYRRNKAPALQPGEAAAMIPPPQSSGNSSCRIPLWGFPSLGQSQ FT GALWVCPQTGLPGSGSRPPLPGSPGDPPTRQGQGRIWLVPPALDLSWIWPAPPARPPLI FT PVTSMLFPVPETWGLQERRTHHDRADPQYLLLLEVQLHPRTDAAGLRQALLSSHRFSGA FT GSGGPKSQPVRKPRYVRRERPLDRATDPAAFPGEARISNV" FT CDS complement(join(1018273..1018367,1019733..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026852..1026923)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-001" FT /standard_name="OTTHUMP00000000808" FT /product="chromosome 1 open reading frame 159" FT /note="match: proteins: Sw:Q96HA4-4.2 Sw:Q96HA4.2 FT Tr:Q9NWV0" FT /protein_id="CAI14316.1" FT /translation="MALRHLALLAGLLVGVASKSMENTAQLPECCVDVVGVNASCPGAS FT LCGPGCYRRWNADGSASCVRCGNGTLPAYNGSECRSFAGPGAPFPMNRSSGTPGRPHPG FT APRVAASLFLGTFFISSGLILSVAGFFYLKRSSKLPRACYRRNKAPALQPGEAAAMIPP FT PQSSVRKPRYVRRERPLDRATDPAAFPGEARISNV" FT mRNA complement(join(1017615..1018367,1019295..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026852..1027554)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-004" FT /product="chromosome 1 open reading frame 159" FT /note="match: cDNAs: Em:BC028173.1" FT CDS complement(join(1018273..1018367,1019295..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026852..1026923)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-004" FT /standard_name="OTTHUMP00000000809" FT /product="chromosome 1 open reading frame 159" FT /protein_id="CAI14315.1" FT /translation="MALRHLALLAGLLVGVASKSMENTAQLPECCVDVVGVNASCPGAS FT LCGPGCYRRWNADGSASCVRCGNGTLPAYNGSECRSFAGPGAPFPMNRSSGTPGRPHPG FT APRVAASLFLGTFFISSGLILSVAGFFYLKRSSKLPRACYRRNKAPALQPGEAAAMIPP FT PQSSGNSSCRIPLWGFPSLGQSQGALWVCPQTGLPGSGSRPPLPGSPGDPPTRQGQGRI FT WLVPPALDLSWIWPAPPARPPLIPVTSMLFPVPETWGLQERRTHHDRADPQYLLLLEVQ FT LHPRTDAAGLRQALLSSHRFSGAGSGGPKSQPVRKPRYVRRERPLDRATDPAAFPGEAR FT ISNV" FT CDS complement(join(<1018296..1018367,1019295..1019391, FT 1019733..1019763,1019861..1019886,1021258..1021392, FT 1022519..1022584,1022882..1022977,1025733..1025808, FT 1026852..1026923)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-011" FT /standard_name="OTTHUMP00000000897" FT /product="chromosome 1 open reading frame 159" FT /protein_id="CAI14317.2" FT /translation="MALRHLALLAGLLVGVASKSMENTAQLPECCVDVVGVNASCPGAS FT LCGPGCYRRWNADGSASCVRCGNGTLPAYNGSECRSFAGPGAPFPMNRSSGTPGRPHPG FT APRVAASLFLGTFFISSGLILSVAGFFYLKRSSKLPRACYRRNKAPALQPGEAAAMIPP FT PQSSAPPEDRRSRPPPGPPEQPSLQWCWVRRTQESARTEAALRQAGAAPGQGHGSRCLP FT GG" FT CDS complement(join(<1022955..1022977,1025733..1025808, FT 1026852..1026923)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-017" FT /standard_name="OTTHUMP00000202118" FT /product="chromosome 1 open reading frame 159" FT /protein_id="CAQ52473.1" FT /translation="MALRHLALLAGLLVGVASKSMENTAQLPECCVDVVGVNASCPGAS FT LCGPGCYRRWNA" FT CDS complement(join(<1025786..1025808,1026658..1026754, FT 1026852..1026923)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-016" FT /standard_name="OTTHUMP00000202117" FT /product="chromosome 1 open reading frame 159" FT /protein_id="CAQ52474.1" FT /translation="MALRHLALLAGLLVGVASKSMENTDTDVPAPEVLTRSTAGVRGAC FT ASQRGALRCLLGPAARVLC" FT mRNA complement(join(1017203..1018367,1019733..1019886, FT 1020631..1020690,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026852..1026945, FT 1027371..1027457)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-012" FT /product="chromosome 1 open reading frame 159" FT /note="match: cDNAs: Em:BC008788.2" FT mRNA complement(join(1022521..1022584,1022882..1022977, FT 1025733..1025967,1026852..1026945,1027371..1027674)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-010" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BM473098.1 Em:BU192660.1 FT Em:DA047903.1" FT mRNA complement(join(<1022955..1022977,1025733..1025808, FT 1026852..1026945,1027371..1027483,1027946..1028193)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-017" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:DA887069.1" FT mRNA complement(join(<1025786..1025808,1026658..1026754, FT 1026852..1026945,1027371..1027483,1027946..1028193)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-016" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:DB165770.1" FT misc_feature 1030461..1030463 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 1033016..1033195 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(1018080..1018367,1019733..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026852..1026945, FT 1027371..1027483,1041336..1041507)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-009" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BX422840.1" FT misc_feature 1046550..1046595 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 1049104..1049114 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 1049773..1049789 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 1050477..1050530 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(1017203..1018367,1019295..1019466, FT 1019733..1019763,1019861..1019886,1021258..1021392, FT 1022519..1022584,1022882..1022977,1025733..1025808, FT 1026852..1026945,1027371..1027483,1051440..1051475)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-019" FT /product="chromosome 1 open reading frame 159" FT /note="match: cDNAs: Em:AY358490.1" FT mRNA complement(join(1017198..1018367,1019295..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026256..1026363, FT 1026852..1026945,1027371..1027483,1050402..1050455, FT 1051440..1051461)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-002" FT /product="chromosome 1 open reading frame 159" FT /note="match: cDNAs: Em:AK057368.1" FT /note="match: ESTs: Em:DA677793.1 Em:DB021925.1" FT mRNA complement(join(1017203..1018367,1019733..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026852..1026945, FT 1027371..1027483,1051440..1051478)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-001" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BG491304.1 Em:BG762978.1 FT Em:BM475896.1 Em:BX280334.1 Em:CB960200.1 Em:CF272346.1" FT /note="match: cDNAs: Em:AK000591.1" FT mRNA complement(join(1017205..1018367,1019295..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1026754,1026852..1026945, FT 1027371..1027483,1051440..1051469)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-003" FT /product="chromosome 1 open reading frame 159" FT /note="match: cDNAs: Em:AK128434.1" FT mRNA complement(join(<1018296..1018367,1019295..1019391, FT 1019733..1019763,1019861..1019886,1021258..1021392, FT 1022519..1022584,1022882..1022977,1025733..1025808, FT 1026852..1026945,1027371..1027483,1051440..1051475)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-011" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BQ685536.1" FT mRNA complement(join(1017205..1018367,1019295..1019466, FT 1019733..1019763,1019861..1019886,1021258..1021392, FT 1022519..1022584,1022882..1022977,1025733..1025808, FT 1026658..1026754,1026852..1026945,1027371..1027483, FT 1051440..1051469)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-013" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BG676765.1" FT /note="match: cDNAs: Em:AK124054.1" FT mRNA complement(join(1019306..1019466,1019733..1019763, FT 1019861..1019886,1021258..1021392,1022519..1022584, FT 1022882..1022977,1025733..1025808,1026852..1026945, FT 1027371..1027483,1051440..1051623)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-005" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BX394177.1" FT mRNA complement(join(1022570..1022584,1022882..1022977, FT 1025733..1025808,1026852..1026989,1027371..1027483, FT 1051440..1051741)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-007" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BI826109.1 Em:BM763571.1 FT Em:BM847180.1 Em:CB116448.1" FT mRNA complement(join(1022519..1022584,1022882..1022977, FT 1025733..1025808,1026852..1026945,1027371..1027483, FT 1041336..1041429,1051440..1051736)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-008" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:BM738024.1 Em:BM755998.1 FT Em:DA784564.1 Em:DB026989.1" FT mRNA complement(join(1026880..1026945,1027371..1027483, FT 1041336..1041429,1042030..1042251,1050402..1050455, FT 1051440..1051469)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-015" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:DA774257.1" FT mRNA complement(join(1026426..1026945,1027371..1027483, FT 1051440..1051467)) FT /gene="C1orf159" FT /locus_tag="RP11-465B22.4-018" FT /product="chromosome 1 open reading frame 159" FT /note="match: ESTs: Em:CN391981.1 Em:DA218713.1 FT Em:DA636541.1 Em:DB152458.1 Em:DB156933.1" FT mRNA join(1072397..1072490,1076205..1076412,1078119..1079436) FT /locus_tag="RP11-465B22.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI908415.1" FT /note="match: cDNAs: Em:BC028014.1" FT polyA_signal 1079411..1079416 FT polyA_site 1079436 FT mRNA join(1109283..1109306,1109646..1109701,1109804..1109869, FT 1114569..1114713,1115037..1115117,1115414..1115720, FT 1115863..1115981,1116111..1116240,1117121..1117195, FT 1117741..1117826,1118256..1118427,1119300..1119471, FT 1120349..1120489,AL162741.44:6712..6828, FT AL162741.44:7205..7298,AL162741.44:7550..8047) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-002" FT /product="tubulin tyrosine ligase-like family, member 10" FT /note="match: ESTs: Em:AI918771.1 Em:AW449508.1 FT Em:BI772126.1 Em:BM559598.1 Em:BM559758.1 Em:BU609043.1" FT /note="match: cDNAs: Em:AK124125.1 Em:BC027945.1" FT mRNA complement(join(1108436..1111776,1114745..1114935)) FT /locus_tag="RP11-465B22.6-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AK128833.1" FT mRNA join(1115077..1115233,1115414..1115720,1115863..1115981, FT 1116111..1116240,1117121..1117195,1117741..1117826, FT 1118256..1118427,1119300..1119471,1120349..1121244) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-001" FT /product="tubulin tyrosine ligase-like family, member 10" FT /note="match: ESTs: Em:AA620612.1 Em:AL045435.1 FT Em:BM554140.1 Em:BM554457.1 Em:BM559999.1" FT /note="match: cDNAs: Em:AK093438.1 Em:AX748126.1" FT CDS join(1115434..1115720,1115863..1115981,1116111..1116240, FT 1117121..1117195,1117741..1117826,1118256..1118427, FT 1119300..1119471,1120349..1120489,AL162741.44:6712..6828, FT AL162741.44:7205..7298,AL162741.44:7550..7959) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-002" FT /standard_name="OTTHUMP00000000974" FT /product="tubulin tyrosine ligase-like family, member 10" FT /protein_id="CAI14321.1" FT /translation="MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLN FT SHRPADSDDTNAAGPSAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSK FT GWQRIHDSRRDDYTLKWCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRA FT RAMSKASKVPGGVQARLEKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKH FT EREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFR FT GPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDL FT GGHLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKKRMQQ FT IMAHCFLAAKPKLDCKLGYFDLIGCDFLIDDNFKVWLLEMNSNPALHTNCEVLKEVIPG FT VVIETLDLVLETFRKSLRGQKMLPLLSQRRFVLLHNGEADPRPHLGGSCSLRRWPPLPT FT RQAKSSGPPMPHAPDQPGARRPAPPPLVPQRPRPPGPDLDSAHDGEPQAPGTEQSGTGN FT RHPAQEPSPGTAKEEREEPENARP" FT CDS join(1115434..1115720,1115863..1115981,1116111..1116240, FT 1117121..1117195,1117741..1117826,1118256..1118427, FT 1119300..1119471,1120349..1120522) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-001" FT /standard_name="OTTHUMP00000000973" FT /product="tubulin tyrosine ligase-like family, member 10" FT /note="match: proteins: Tr:Q8N9X2" FT /protein_id="CAI14322.1" FT /translation="MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLN FT SHRPADSDDTNAAGPSAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSK FT GWQRIHDSRRDDYTLKWCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRA FT RAMSKASKVPGGVQARLEKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKH FT EREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFR FT GPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDL FT GGHLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKVRPLC FT PPVWE" FT mRNA join(1115864..1116240,1117121..1117195,1117741..1117826, FT 1118256..1118427,1119300..1119307) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-004" FT /product="tubulin tyrosine ligase-like family, member 10" FT /note="match: ESTs: Em:BG825818.1" FT mRNA join(1120416..1120489,AL162741.44:6498..6600, FT AL162741.44:6712..6828,AL162741.44:7205..7298, FT AL162741.44:7550..7587) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-003" FT /product="tubulin tyrosine ligase-like family, member 10" FT /note="match: ESTs: Em:AI805278.1" FT polyA_signal 1121224..1121229 FT polyA_site 1121244 FT misc_feature 1123269 FT /note="Clone_left_end: RP5-902P8" FT mRNA join(AL645608.30:183584..183696,AL645608.30:184130..184243, FT 998459..998581,1001210..1001836) FT /locus_tag="RP11-465B22.1-005" FT /product="novel transcript" FT /note="match: ESTs: Em:BI601978.1" FT /note="match: cDNAs: Em:BC033949.2" FT mRNA join(AL645608.30:184870..184967,998459..998581, FT 1001210..1001385) FT /locus_tag="RP11-465B22.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BM141900.1 Em:BM142081.1" FT mRNA join(AL645608.30:186058..186658,998441..998668) FT /locus_tag="RP11-465B22.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ918895.1" FT misc_feature 1127269..1237427 FT /note="annotated region of clone" FT mRNA complement(join(1237052..1237426,AL139287.24:2875..2973)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-007" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BQ638874.1" FT CDS complement(join(1228944..1229088,1229203..1229313, FT 1229470..1229579,1229782..1230008,1230827..1230934, FT 1231116..1231318,1231395..1231489,1231591..1231660, FT 1231805..1232013,1233202..1233313,1233393..1233493, FT 1233750..1233801,1233947..1234059,1234725..1234736, FT 1235211..1235285,1235353..1235448,1235538..1235582, FT 1235889..1236072,1237368..1237426,AL139287.24:2875..2928, FT AL139287.24:3115..3213)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-004" FT /standard_name="OTTHUMP00000002288" FT /product="centaurin, beta 5" FT /note="match: proteins: Sw:Q96P50" FT /protein_id="CAI23243.1" FT /translation="MVEAGKAYVSTSRLFVSGVRDLSQQCQGDTVISECLQRFADSLQE FT VVNYHMILFDQAQRSVRQQLQSFVKEDVRKFKETKKQFDKVREDLELSLVRNAQAPRHR FT PHEVEEATGALTLTRKCFRHLALDYVLQINVLQAKKKFEILDSMLSFMHAQSSFFQQGY FT SLLHQLDPYMKKLAAELDQLVIDSAVEKREMERKHAAIQQRTLLQDFSYDESKVEFDVD FT APSGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKKLKDALTVVVDDLRLCSVKPC FT EDIERRFCFEVLSPTKSCMLQADSEKLRQAWVQAVQASIASAYRESPDSCYSERLDRTA FT SPSTSSIDSATDTRERGVKGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIEC FT SGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSAVNQIYEAQCEGAGSRKPTASSS FT RQDKEAWIKDKYVEKKFLRKAPMAPALEAPRRWRVQKCLRPHSSPRAPTARRKVRLEPV FT LPCVAALSSVGTLDRKFRRDSLFCPDELDSLFSYFDAGAAGAGPRKGAESEESSGEADG FT DTEAEAWGLADVRELHPGLLAHRAARARDLPALAAALAHGAEVNWADAEDEGKTPLVQA FT VLGGSLIVCEFLLQNGADVNQRDSRGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQ FT RDPLAIAVQAANADIVTLLRLARMAEEMREAEAAPGPPGALAGSPTELQFRRCIQEFIS FT LHLEES" FT mRNA complement(join(1227770..1229088,1229203..1229313, FT 1229470..1229579,1229782..1230008,1230827..1230934, FT 1231116..1231318,1231395..1231489,1231591..1231660, FT 1231805..1232013,1233202..1233313,1233393..1233493, FT 1233750..1233801,1233947..1234059,1234725..1234736, FT 1235211..1235285,1235353..1235448,1235538..1235582, FT 1235889..1236072,1237368..1237426,AL139287.24:2875..2928, FT AL139287.24:3115..3234,AL139287.24:4039..5882)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-004" FT /product="centaurin, beta 5" FT /note="match: cDNAs: Em:AB051503.1 Em:AF411981.1" FT mRNA complement(join(1227756..1229088,1229203..1229313, FT 1229470..1229579,1229782..1230008,1230098..1230196, FT 1230827..1230934,1231116..1231318,1231395..1231489, FT 1231591..1231660,1231805..1232013,1233202..1233313, FT 1233393..1233493,1233750..1233801,1233947..1234059, FT 1234725..1234736,1235211..1235285,1235353..1235448, FT 1235538..1235582,1235889..1236072,1237368..1237426, FT AL139287.24:2875..2928,AL139287.24:3115..3234, FT AL139287.24:4039..4096,AL139287.24:7722..7971)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-001" FT /product="centaurin, beta 5" FT /note="match: cDNAs: Em:BC021851.1 Em:BC029929.1 FT Em:BC051194.1" FT /note="match: ESTs: Em:BF204201.1 Em:BG703878.1 FT Em:BG706905.1 Em:BG714104.1 Em:CB997445.1" FT CDS complement(join(1228944..1229088,1229203..1229313, FT 1229470..1229579,1229782..1230008,1230098..1230196, FT 1230827..1230934,1231116..1231318,1231395..1231489, FT 1231591..1231660,1231805..1232013,1233202..1233313, FT 1233393..1233493,1233750..1233801,1233947..1234059, FT 1234725..1234736,1235211..1235285,1235353..1235448, FT 1235538..1235582,1235889..1236072,1237368..1237426, FT AL139287.24:2875..2928,AL139287.24:3115..3234, FT AL139287.24:4039..4096,AL139287.24:7722..7768)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-001" FT /standard_name="OTTHUMP00000002285" FT /product="centaurin, beta 5" FT /note="match: proteins: Tr:Q86UT3" FT /protein_id="CAI23244.1" FT /translation="MTVEFEECVKDSPRFRATIDEVETDVVEIEAKLDKLVKLCSGMVE FT AGKAYVSTSRLFVSGVRDLSQQCQGDTVISECLQRFADSLQEVVNYHMILFDQAQRSVR FT QQLQSFVKEDVRKFKETKKQFDKVREDLELSLVRNAQAPRHRPHEVEEATGALTLTRKC FT FRHLALDYVLQINVLQAKKKFEILDSMLSFMHAQSSFFQQGYSLLHQLDPYMKKLAAEL FT DQLVIDSAVEKREMERKHAAIQQRTLLQDFSYDESKVEFDVDAPSGVVMEGYLFKRASN FT AFKTWNRRWFSIQNSQLVYQKKLKDALTVVVDDLRLCSVKPCEDIERRFCFEVLSPTKS FT CMLQADSEKLRQAWVQAVQASIASAYRESPDSCYSERLDRTASPSTSSIDSATDTRERG FT VKGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSL FT TLDSWEPELLKLMCELGNSAVNQIYEAQCEGAGSRKPTASSSRQDKEAWIKDKYVEKKF FT LRKAPMAPALEAPRRWRVQKCLRPHSSPRAPTARRKVRLEPVLPCVAALSSVGTLDRKF FT RRDSLFCPDELDSLFSYFDAGAAGAGPRSLSSDSGLGGSSDGSSDVLAFGSGSVVDSVT FT EEEGAESEESSGEADGDTEAEAWGLADVRELHPGLLAHRAARARDLPALAAALAHGAEV FT NWADAEDEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRDSRGRAPLHHATLLGRTGQVC FT LFLKRGADQHALDQEQRDPLAIAVQAANADIVTLLRLARMAEEMREAEAAPGPPGALAG FT SPTELQFRRCIQEFISLHLEES" FT mRNA complement(join(1237236..1237426,AL139287.24:2875..2928, FT AL139287.24:3115..3234,AL139287.24:4039..4096, FT AL139287.24:7722..7783)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-006" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BF115217.1" FT polyA_signal 1133294..1133299 FT polyA_site 1133315 FT misc_feature 1134377..1134451 FT /note="Sequence from overlapping clone RP11-465B22 FT (AL390719). Assembly confirmed by restriction digest" FT misc_feature 1134612..1134633 FT /note="Sequence from overlapping clone RP11-465B22 FT (AL390719). Assembly confirmed by restriction digest" FT mRNA complement(join(1234124..1235285,1235353..1235448, FT 1235538..1235582,1235889..1236072,1237368..1237426, FT AL139287.24:2875..2928,AL139287.24:3115..3234, FT AL139287.24:4039..4096,AL139287.24:9395..>9562)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-002" FT /product="centaurin, beta 5" FT /note="match: cDNAs: Em:AK093954.1 Em:AX748381.1" FT /note="match: ESTs: Em:BU147763.1" FT CDS complement(join(1235055..1235285,1235353..1235448, FT 1235538..1235582,1235889..1236072,1237368..1237426, FT AL139287.24:2875..2928,AL139287.24:3115..3234, FT AL139287.24:4039..4096,AL139287.24:9395..>9562)) FT /codon_start=2 FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-002" FT /standard_name="OTTHUMP00000002286" FT /product="centaurin, beta 5" FT /note="match: proteins: Tr:Q8N9S2" FT /protein_id="CAI23245.1" FT /translation="LTLPGESSIGCVQTPAAHHAGDSQWPGGTGRSGTWLRDERGSRWA FT LGRPAGPYGGRATIDEVETDVVEIEAKLDKLVKLCSGMVEAGKAYVSTSRLFVSGVRDL FT SQQCQGDTVISECLQRFADSLQEVVNYHMILFDQAQRSVRQQLQSFVKEDVRKFKETKK FT QFDKVREDLELSLVRNAQAPRHRPHEVEEATGALTLTRKCFRHLALDYVLQINVLQAKK FT KFEILDSMLSFMHAQSSFFQQGYSLLHQLDPYMKKLAAELDQLVIDSAVEKREMERKHA FT AIQQRVRPRSRLPAHQAPGRPLRPHPMPGTPSPPLPPACLPPALPTPSLGDQGCSL" FT polyA_site complement(1138888) FT polyA_signal complement(1138902..1138907) FT mRNA complement(join(1139224..1139348,1139414..1139616, FT 1139779..1139866,1140750..1141060)) FT /gene="TNFRSF18" FT /locus_tag="RP5-902P8.2-004" FT /product="tumor necrosis factor receptor superfamily, FT member 18" FT /note="match: cDNAs: Em:AX794366.1" FT mRNA complement(join(1138888..1139340,1139779..1139866, FT 1140750..1140872,1141765..1141951)) FT /gene="TNFRSF18" FT /locus_tag="RP5-902P8.2-003" FT /product="tumor necrosis factor receptor superfamily, FT member 18" FT /note="match: cDNAs: Em:AF241229.1" FT CDS complement(join(1138971..1139340,1139779..1139866, FT 1140750..1140872,1141765..1141951)) FT /gene="TNFRSF18" FT /locus_tag="RP5-902P8.2-003" FT /standard_name="OTTHUMP00000001521" FT /product="tumor necrosis factor receptor superfamily, FT member 18" FT /protein_id="CAI23246.1" FT /translation="MAQHGAMGAFRALCGLALLCALSLGQRPTGGPGCGPGRLLLGTGT FT DARCCRVHTTRCCRDYPGEECCSEWDCMCVQPEFHCGDPCCTTCRHHPCPPGQGVQSQG FT KFSFGFQCIDCASGTFSGGHEGHCKPWTDCCWRCRRRPKTPEAASSPRKSGASDRQRRR FT GGWETCGCEPGRPPGPPTAASPSPGAPQAAGALRSALGRALLPWQQKWVQEGGSDQRPG FT PCSSAAAAGPCRRERETQSWPPSSLAGPDGVGS" FT mRNA complement(join(1138891..1139348,1139414..1139616, FT 1139779..1139866,1140750..1140872,1141765..1142071)) FT /gene="TNFRSF18" FT /locus_tag="RP5-902P8.2-001" FT /product="tumor necrosis factor receptor superfamily, FT member 18" FT /note="match: cDNAs: Em:AF125304.1 Em:AX781595.1 FT Em:AX781599.1" FT /note="match: ESTs: Em:AI214481.1 Em:BU944957.1 FT Em:BX115469.1" FT CDS complement(join(1139224..1139348,1139414..1139616, FT 1139779..1139866,1140750..1140872,1141765..1141951)) FT /gene="TNFRSF18" FT /locus_tag="RP5-902P8.2-001" FT /standard_name="OTTHUMP00000001519" FT /product="tumor necrosis factor receptor superfamily, FT member 18" FT /note="match: proteins: Sw:Q9Y5U5" FT /protein_id="CAI23247.1" FT /translation="MAQHGAMGAFRALCGLALLCALSLGQRPTGGPGCGPGRLLLGTGT FT DARCCRVHTTRCCRDYPGEECCSEWDCMCVQPEFHCGDPCCTTCRHHPCPPGQGVQSQG FT KFSFGFQCIDCASGTFSGGHEGHCKPWTDCTQFGFLTVFPGNKTHNAVCVPGSPPAEPL FT GWLTVVLLAVAACVLLLTSAQLGLHIWQLRSQCMWPRETQLLLEVPPSTEDARSCQFPE FT EERGERSAEEKGRLGDLWV" FT mRNA complement(join(1139224..1139348,1139435..1139616, FT 1139779..1139866,1140750..1140872,1141765..1141951)) FT /gene="TNFRSF18" FT /locus_tag="RP5-902P8.2-002" FT /product="tumor necrosis factor receptor superfamily, FT member 18" FT /note="match: cDNAs: Em:AF117297.1" FT CDS complement(join(1139224..1139348,1139435..1139616, FT 1139779..1139866,1140750..1140872,1141765..1141951)) FT /gene="TNFRSF18" FT /locus_tag="RP5-902P8.2-002" FT /standard_name="OTTHUMP00000001520" FT /product="tumor necrosis factor receptor superfamily, FT member 18" FT /protein_id="CAI23248.1" FT /translation="MAQHGAMGAFRALCGLALLCALSLGQRPTGGPGCGPGRLLLGTGT FT DARCCRVHTTRCCRDYPGEECCSEWDCMCVQPEFHCGDPCCTTCRHHPCPPGQGVQSQG FT KFSFGFQCIDCASGTFSGGHEGHCKPWTDCTQFGFLTVFPGNKTHNAVCVPGSPPAEPL FT GWLTVVLLAVAACVLLLTSAQLGLHIWQLRKTQLLLEVPPSTEDARSCQFPEEERGERS FT AEEKGRLGDLWV" FT misc_feature 1145906..1145955 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT polyA_site complement(1146706) FT polyA_site complement(1146725) FT polyA_signal complement(1146737..1146742) FT mRNA complement(join(<1147399..1147518,1148018..1148084, FT 1148372..1148473,1148775..>1148878)) FT /gene="TNFRSF4" FT /locus_tag="RP5-902P8.3-003" FT /product="tumor necrosis factor receptor superfamily, FT member 4" FT /note="match: ESTs: Em:AA306055.1" FT CDS complement(join(<1147399..1147518,1148018..1148084, FT 1148372..1148473,1148775..>1148878)) FT /codon_start=2 FT /gene="TNFRSF4" FT /locus_tag="RP5-902P8.3-003" FT /standard_name="OTTHUMP00000001523" FT /product="tumor necrosis factor receptor superfamily, FT member 4" FT /protein_id="CAI23249.1" FT /translation="PGAPPLPPGAQTRPRPRGVGETTLAMWPGLAGLSRSGSERKQLCT FT ATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPAS FT NSSDAICEDRDPPATQPQETQGPPARP" FT mRNA complement(join(1146706..1147005,1147084..1147212, FT 1147322..1147518,1148018..1148084,1148372..1148473, FT 1149043..1149165,1149363..1149512)) FT /gene="TNFRSF4" FT /locus_tag="RP5-902P8.3-001" FT /product="tumor necrosis factor receptor superfamily, FT member 4" FT /note="match: cDNAs: Em:S76792.1 Em:X75962.1" FT /note="match: ESTs: Em:BG236062.1 Em:BM769367.1 FT Em:BM769551.1 Em:BM773516.1 Em:BM818799.1 Em:BM825556.1 FT Em:BM918500.1 Em:BM998301.1 Em:BQ083622.1" FT CDS complement(join(1146935..1147005,1147084..1147212, FT 1147322..1147518,1148018..1148084,1148372..1148473, FT 1149043..1149165,1149363..1149507)) FT /gene="TNFRSF4" FT /locus_tag="RP5-902P8.3-001" FT /standard_name="OTTHUMP00000001522" FT /product="tumor necrosis factor receptor superfamily, FT member 4" FT /note="match: proteins: Sw:P43489" FT /protein_id="CAI23250.1" FT /translation="MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHE FT CRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQD FT TVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSD FT AICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLG FT LVLGLLGPLAILLALYLLRRDQRLPPDAHKPPGGGSFRTPIQEEQADAHSTLAKI" FT mRNA complement(join(1146720..1147212,1147322..1147518, FT 1148018..1148084,1148372..1149165,1149363..1149518)) FT /gene="TNFRSF4" FT /locus_tag="RP5-902P8.3-002" FT /product="tumor necrosis factor receptor superfamily, FT member 4" FT /note="match: cDNAs: Em:BC040257.1" FT polyA_site complement(1152288) FT polyA_site complement(1152294) FT polyA_site complement(1152311) FT polyA_signal complement(1152311..1152316) FT mRNA complement(join(1152314..1153068,1153838..1155673)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-004" FT /product="stromal cell derived factor 4" FT /note="match: cDNAs: Em:AK055331.1" FT misc_feature 1154027 FT /note="Clone_right_end: RP11-465B22" FT mRNA complement(join(1152312..1153068,1153838..1154013, FT 1154149..1156731)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-003" FT /product="stromal cell derived factor 4" FT /note="match: cDNAs: Em:AK126927.1" FT /note="match: ESTs: Em:BF967183.2 Em:BG707560.1 FT Em:BQ951296.1" FT CDS complement(join(1152892..1153068,1153838..1154013, FT 1154149..1154307,1158624..1158737,1159212..1159348, FT 1163848..1164173)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-001" FT /standard_name="OTTHUMP00000001752" FT /product="stromal cell derived factor 4" FT /note="match: proteins: Sw:Q61112 Sw:Q91ZS3 Sw:Q9BRK5" FT /protein_id="CAI23251.1" FT /translation="MVWPWVAMASRWGPLIGLAPCCLWLLGAVLLMDASARPANHSSTR FT ERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRKLM FT VIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYK FT VKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFL FT SFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKD FT RKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHLEPEEVL FT KYSEFFTGSKLVDYARSVHEEF" FT CDS complement(join(1153050..1153184,1153838..1154013, FT 1154149..1154307,1158624..1158737,1159212..1159348, FT 1163848..1164173)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-007" FT /standard_name="OTTHUMP00000001755" FT /product="stromal cell derived factor 4" FT /protein_id="CAI23252.1" FT /translation="MVWPWVAMASRWGPLIGLAPCCLWLLGAVLLMDASARPANHSSTR FT ERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRKLM FT VIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYK FT VKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFL FT SFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKD FT RKKEFEELIDSNHDGIVTAEELENVPTLPLQPIGTLNSHFVRLAAELGGGKATLTCAPL FT ARRATWTP" FT mRNA complement(join(<1153903..1154013,1154149..1154385, FT 1158624..1158737,1159212..1159348,1163848..>1163976)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-006" FT /product="stromal cell derived factor 4" FT /note="match: ESTs: Em:BG468255.1" FT CDS complement(join(<1153903..1154013,1154149..1154385, FT 1158624..1158737,1159212..1159348,1163848..>1163976)) FT /codon_start=2 FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-006" FT /standard_name="OTTHUMP00000001754" FT /product="stromal cell derived factor 4" FT /protein_id="CAI23254.1" FT /translation="LEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRKLMVIFSKVD FT VNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASK FT GHSEKEVADAIRLNEELKVDEESSTSRNFLDLRAGVCRPRYPQAAPLSAQEVLENLKDR FT WYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLP FT VGTVENQQGQDIDDNWVKDR" FT misc_feature 1166283..1166304 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(1152288..1153068,1153838..1154013, FT 1154149..1154307,1158624..1158737,1159212..1159348, FT 1163848..1164326,1167272..1167381)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-001" FT /product="stromal cell derived factor 4" FT /note="match: cDNAs: Em:AK075352.1 Em:BC006211.1 FT Em:BC008917.1 Em:BC011244.1 Em:BC022375.1" FT /note="match: ESTs: Em:AL553300.2 Em:BE074252.1 FT Em:BG009038.1 Em:BG698542.1 Em:BM805260.1 Em:BX370095.1" FT mRNA complement(join(1152311..1153184,1153838..1154013, FT 1154149..1154323,1158624..1158737,1159212..1159348, FT 1163848..1164326,1167272..1167411)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-002" FT /product="stromal cell derived factor 4" FT /note="match: cDNAs: Em:AF153686.1" FT mRNA complement(join(1152311..1153184,1153838..1154013, FT 1154149..1154307,1158624..1158737,1159212..1159348, FT 1163848..1164326,1167272..1167411)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-007" FT /product="stromal cell derived factor 4" FT /note="match: cDNAs: Em:AF178986.1" FT mRNA complement(join(1162809..1162844,1163848..1164326, FT 1167272..1167348)) FT /gene="SDF4" FT /locus_tag="RP5-902P8.6-005" FT /product="stromal cell derived factor 4" FT /note="match: ESTs: Em:BI826719.1" FT mRNA 1167645..1170421 FT /gene="B3GALT6" FT /locus_tag="RP5-902P8.7-001" FT /product="UDP-Gal:betaGal beta 1,3-galactosyltransferase FT polypeptide 6" FT /note="match: cDNAs: Em:AY050570.1 Em:BC015549.1 FT Em:BC041621.1 Em:BC051719.1" FT /note="match: ESTs: Em:AA988102.1 Em:AI278266.1 FT Em:AW131869.1 Em:BI544616.1 Em:CD674509.1" FT CDS 1167659..1168648 FT /gene="B3GALT6" FT /locus_tag="RP5-902P8.7-001" FT /standard_name="OTTHUMP00000001756" FT /product="UDP-Gal:betaGal beta 1,3-galactosyltransferase FT polypeptide 6" FT /note="match: proteins: Sw:Q96L58" FT /protein_id="CAI23255.1" FT /translation="MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGR FT SPPPPAPARAAAFLAVLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAE FT ERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARL FT DALLAELRAREPARRRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSA FT DLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQ FT SLEDMLEKHATLAREGRLCKREVQLRLSYVYDWSAPPSQCCQRREGIP" FT polyA_signal 1170399..1170404 FT polyA_site 1170421 FT polyA_site complement(1177826) FT polyA_site complement(1177828) FT polyA_site complement(1177829) FT polyA_site complement(1177833) FT polyA_signal complement(1177848..1177853) FT misc_feature 1178114..1178549 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT mRNA complement(join(1177829..1178026,1178215..1178538)) FT /gene="FAM132A" FT /locus_tag="RP5-902P8.4-005" FT /product="family with sequence similarity 132, member A" FT /note="match: ESTs: Em:AI241049.1 Em:BX119870.1 FT Em:CA394474.1" FT misc_feature 1178424..1178538 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(1177826..1178026,1178215..1178293, FT 1178442..1178843)) FT /gene="FAM132A" FT /locus_tag="RP5-902P8.4-004" FT /product="family with sequence similarity 132, member A" FT /note="match: ESTs: Em:AI660577.1 Em:AW873053.1 FT Em:BF589994.1 Em:BU621109.1" FT misc_feature 1178539 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1000bp by restriction digest data" FT mRNA complement(join(1178646..1178932,1179334..1179655, FT 1179761..1179798)) FT /gene="FAM132A" FT /locus_tag="RP5-902P8.4-002" FT /product="family with sequence similarity 132, member A" FT /note="match: ESTs: Em:BE906672.1" FT mRNA complement(join(1179361..1179655,1179761..1180104)) FT /gene="FAM132A" FT /locus_tag="RP5-902P8.4-003" FT /product="family with sequence similarity 132, member A" FT /note="match: ESTs: Em:BQ711062.1" FT mRNA complement(join(1177833..1178026,1178215..1178293, FT 1178442..1178532,1178824..1178932,1179334..1179485, FT 1179571..1179655,1179761..1179877,1181894..1182102)) FT /gene="FAM132A" FT /locus_tag="RP5-902P8.4-001" FT /product="family with sequence similarity 132, member A" FT /note="match: cDNAs: Em:BC089443.1" FT CDS complement(join(1177928..1178026,1178215..1178293, FT 1178442..1178532,1178824..1178932,1179334..1179485, FT 1179571..1179655,1179761..1179877,1181894..1182070)) FT /gene="FAM132A" FT /locus_tag="RP5-902P8.4-001" FT /standard_name="OTTHUMP00000001516" FT /product="family with sequence similarity 132, member A" FT /protein_id="CAI23256.2" FT /translation="MRRWAWAAVVVLLGPQLVLLGGVGARREAQRTQQPGQRADPPNAT FT ASASSREGLPEAPKPSQASGPEFSDAHMTWLNFVRRPDDGALRKRCGSRDKKPRDLFGP FT PGPPGAEVTAETLLHEFQELLKEATERRFSGLLDPLLPQGAGLRLVGEAFHCRLQGPRR FT VDKRTLVELHGFQAPAAQGAFLRGSGLSLASGRFTAPVSGIFQFSASLHVDHSELQGKA FT RLRARDVVCVLICIESLCQRHTCLEAVSGLESNSRVFTLQVQGLLQLQAGQYASVFVDN FT GSGAVLTIQAGSSFSGLLLGT" FT misc_feature 1185051..1185066 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT polyA_site complement(1189289) FT polyA_site complement(1189292) FT polyA_site complement(1190281) FT polyA_signal complement(1190297..1190302) FT misc_feature 1190789..1190908 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT mRNA complement(join(1190644..1190867,1191425..1191715)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-009" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:AW612697.1" FT misc_feature 1197283 FT /note="Clone_left_end: RP5-890O3" FT mRNA complement(join(1192502..1192510,1192588..1192690, FT 1198726..1198949)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-008" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BI002559.1 Em:BI002560.1" FT CDS complement(join(1190583..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1203242..1203372)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-001" FT /standard_name="OTTHUMP00000001907" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: proteins: Sw:Q6P073 Sw:Q8N2K1" FT /protein_id="CAI23257.1" FT /translation="MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWH FT YVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDT FT WNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEV FT VEEIKQKQKAQDELSSRPQTLPLPDVVPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQA FT NRHHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE" FT mRNA complement(join(1189289..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1201478..1201670,1203242..>1203278)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-002" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: cDNAs: Em:AK056065.1" FT /note="match: ESTs: Em:BX096192.1" FT CDS complement(join(1190583..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1201478..1201670,1203242..>1203278)) FT /codon_start=1 FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-002" FT /standard_name="OTTHUMP00000001908" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: proteins: Sw:Q8N2K1" FT /protein_id="CAI23259.1" FT /translation="SVPSPSLRIFSSEKRYFSELKGNVFRLGQGSTFSGSQRRPSPGRR FT RIPRVRRSPLATRVLSAPSVENHMWPQDIAGRHYVVRGPEMTPYEGGYYHGKLIFPREF FT PFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG FT SIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQKQKAQDELSSRPQTLPLPDV FT VPDGETHLVQNGIQLLNGHAPGAVPNLAGLQQANRHHGLLGGALANLFVIVGFAAFAYT FT VKYVLRSIAQE" FT CDS complement(join(<1190775..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1203242..1203372)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-010" FT /standard_name="OTTHUMP00000002077" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /protein_id="CAI23258.1" FT /translation="MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWH FT YVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDT FT WNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEV FT VEEIKQKQKAQDELSSRPQTLPLPDVVPDGETH" FT CDS complement(join(<1192607..1192690,1198726..1198766, FT 1200163..1200210,1203242..1203372)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-014" FT /standard_name="OTTHUMP00000179157" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /protein_id="CAM12828.1" FT /translation="MSSTSSKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWF FT KRFSWLSLLSSWDYRHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNG" FT mRNA complement(join(1203242..1203372,1208233..1208851)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-013" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BI913221.1 Em:BM044633.1" FT mRNA complement(join(<1190775..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1203242..1203372,1208757..1209224)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-010" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BI561749.1 Em:BM172466.1" FT mRNA complement(join(1190544..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1203242..1203372,1208879..1209106)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-011" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BG766070.1 Em:BI439116.1 FT Em:BM807962.1 Em:BU521698.1 Em:BX339632.1" FT mRNA complement(join(1191429..1191505,1192372..1192510, FT 1192588..1192690,1208879..1209170)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-012" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BI439116.1" FT mRNA complement(join(<1192607..1192690,1198726..1198766, FT 1200163..1200210,1203242..1203372,1208879..1209217)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-014" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BG766070.1" FT mRNA complement(join(1189850..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1203242..1203372,1209046..1209265)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-001" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: cDNAs: Em:AK004626.1 Em:AK075017.1 FT Em:U93242.1" FT /note="match: ESTs: Em:BG721041.1 Em:BQ220844.1 FT Em:BU188203.1 Em:CB992253.1" FT mRNA complement(join(1190648..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1198726..1198766, FT 1203113..1203372,1209046..1209229)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-003" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BG112933.1 Em:BG753315.1 FT Em:BX384958.1" FT mRNA complement(join(1190428..1190867,1191425..1191505, FT 1192372..1192510,1192588..1192690,1197649..1197770, FT 1198726..1198766,1203242..1203372,1209046..1209244)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-007" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:AL555293.2 Em:BG753301.1 FT Em:BI829740.1" FT mRNA complement(join(1192372..1192510,1192588..1192690, FT 1198726..1198766,1201478..1201670,1203113..1203372, FT 1209046..1209195)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-004" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BX343049.1" FT mRNA complement(join(1192429..1192510,1192588..1192690, FT 1197550..1197770,1198726..1198766,1203242..1203372, FT 1209046..1209234)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-006" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BG717336.1" FT mRNA complement(join(1198233..1198766,1203242..1203372, FT 1209046..1209217)) FT /gene="UBE2J2" FT /locus_tag="RP5-902P8.8-005" FT /product="ubiquitin-conjugating enzyme E2, J2 (UBC6 FT homolog, yeast)" FT /note="match: ESTs: Em:BG548442.1" FT mRNA join(1210603..1210679,1214448..1214528,1215691..1215800) FT /locus_tag="RP5-902P8.10-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA041391.1" FT mRNA join(1210617..1210679,1214448..1214773) FT /locus_tag="RP5-902P8.10-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BX424308.1" FT mRNA join(1215852..1216046,1216606..1216677,1216791..1216990, FT 1217622..1217695,1219358..1219470,1221306..1221658, FT 1222148..1222355,1222489..1222679,1222888..1222976, FT 1223053..1223216,1223319..1223417,1225651..1225768, FT 1225857..1225935,1226017..1226074,1226275..1226333, FT 1226445..1226520,1226634..1226753) FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-002" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /note="match: cDNAs: Em:BC040882.1" FT /note="match: ESTs: Em:BM547056.1" FT mRNA join(1215968..1216990,1217622..1217695,1219358..1219470, FT 1221306..1221658,1222148..1222355,1222489..1222679, FT 1222888..1222976,1223053..1223216,1223319..1223417, FT 1225651..1225768,1225857..1225935,1226017..1226074, FT 1226275..1226333,1226445..1226520,1226634..1227404) FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-001" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /note="match: cDNAs: Em:AF038165.1 Em:AK127357.1 FT Em:U38254.1" FT /note="match: ESTs: Em:BI820185.1 Em:BM353290.1 FT Em:BM715513.1 Em:BU078901.1 Em:CA777026.1" FT mRNA join(1217489..1217695,1219358..1219470,1220951..1221044, FT 1221306..1221658,1222148..1222355,1222489..1222679, FT 1222888..1222976,1223053..1223216,1223319..1223417, FT 1225651..1225768,1225857..1225935,1226017..1226074, FT 1226275..1226333,1226445..1226520,1226634..1227404) FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-003" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /note="match: cDNAs: Em:AK093239.1 Em:AX748006.1" FT /note="match: ESTs: Em:BQ711522.1" FT misc_feature 1217504..1217558 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT misc_feature 1217514..1217558 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT CDS join(<1217544..1217567,1217656..1217695,1219358..1219470, FT 1220951..1220977,1222675..1222679,1222888..1223216, FT 1223319..1223417,1225651..1225768,1225857..1225935, FT 1226017..1226074,1226275..1226333,1226445..1226520, FT 1226634..1226990) FT /codon_start=2 FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-004" FT /standard_name="OTTHUMP00000002085" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /protein_id="CAI23260.1" FT /translation="LKEISSERTSPVAAASFQSRQEARGSILLQSCQLPPQWLSTEAWT FT GEWKQPHGGALTSRSPGPVAPQRPDSSGPSTTPPTAAATRSMASGQLSAPASPTVGASP FT WPVRGQGCRSGGLTPALGLPGVGLVLRVEQQPHLPLLSTLAGIRVMVHGRNHTPFLGHH FT SFSVRPGTEATISIREDEVHRLGSPYGHCTAGGEGVEVELLHNTSYTRQACLVSCFQQL FT MVETCSCGYYLHPLPAGAEYCSSARHPAWGHCFYRLYQDLETHRLPCTSRCPRPCRESA FT FKLSTGTSRWPSAKSAGWTLATLGEQGLPHQSHRQRSSLAKINIVYQELNYRSVEEAPV FT YSVPQLLSAMGSLCSLWFGASVLSLLELLELLLDASALTLVLGGRRLRRAWFSWPRASP FT ASGASSIKPEASQMPPPAGGTSDDPEPSGPHLPRVMLPGVLAGVSAEESWAGPQPLETL FT DT" FT mRNA join(<1217544..1217567,1217656..1217695,1219358..1219470, FT 1220951..1220977,1222675..1222679,1222888..1223216, FT 1223319..1223417,1225651..1225768,1225857..1225935, FT 1226017..1226074,1226275..1226333,1226445..1226520, FT 1226634..1227409) FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-004" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /note="match: cDNAs: Em:AK093372.1 Em:AX748083.1" FT misc_feature 1217559 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 400bp by restriction digest data" FT misc_feature 1217560..1217584 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT CDS join(1217639..1217695,1219358..1219470,1220951..1221044, FT 1221306..1221658,1222148..1222355,1222489..1222679, FT 1222888..1222976,1223053..1223216,1223319..1223417, FT 1225651..1225768,1225857..1225935,1226017..1226074, FT 1226275..1226333,1226445..1226520,1226634..1226990) FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-003" FT /standard_name="OTTHUMP00000002083" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /protein_id="CAI23261.1" FT /translation="MAFLSRTSPVAAASFQSRQEARGSILLQSCQLPPQWLSTEAWTGE FT WKQPHGGALTSRSPGPVAPQRPCHLKGWQHRPTQHNAACKQGQAAAQTPPRPGPPSAPP FT PPPKEGHQEGLVELPASFRELLTFFCTNATIHGAIRLVCSRGNRLKTTSWGLLSLGALV FT ALCWQLGLLFERHWHRPVLMAVSVHSERKLLPLVTLCDGNPRRPSPVLRHLELLDEFAR FT ENIDSLYNVNLSKGRAALSATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGG FT DCFYRGYTSGVAAVQDWYHFHYVDILALLPAAWEDSHGSQDGHFVLSCSYDGLDCQARQ FT FRTFHHPTYGSCYTVDGVWTAQRPGITHGVGLVLRVEQQPHLPLLSTLAGIRVMVHGRN FT HTPFLGHHSFSVRPGTEATISIREDEVHRLGSPYGHCTAGGEGVEVELLHNTSYTRQAC FT LVSCFQQLMVETCSCGYYLHPLPAGAEYCSSARHPAWGHCFYRLYQDLETHRLPCTSRC FT PRPCRESAFKLSTGTSRWPSAKSAGWTLATLGEQGLPHQSHRQRSSLAKINIVYQELNY FT RSVEEAPVYSVPQLLSAMGSLCSLWFGASVLSLLELLELLLDASALTLVLGGRRLRRAW FT FSWPRASPASGASSIKPEASQMPPPAGGTSDDPEPSGPHLPRVMLPGVLAGVSAEESWA FT GPQPLETLDT" FT CDS join(1219405..1219470,1221306..1221658,1222148..1222355, FT 1222489..1222679,1222888..1222976,1223053..1223216, FT 1223319..1223417,1225651..1225768,1225857..1225935, FT 1226017..1226074,1226275..1226333,1226445..1226520, FT 1226634..1226990) FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-001" FT /standard_name="OTTHUMP00000002084" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /note="match: proteins: Sw:O46547 Sw:P51172" FT /protein_id="CAI23262.1" FT /translation="MAEHRSMDGRMEAATRGGSHLQAAAQTPPRPGPPSAPPPPPKEGH FT QEGLVELPASFRELLTFFCTNATIHGAIRLVCSRGNRLKTTSWGLLSLGALVALCWQLG FT LLFERHWHRPVLMAVSVHSERKLLPLVTLCDGNPRRPSPVLRHLELLDEFARENIDSLY FT NVNLSKGRAALSATVPRHEPPFHLDREIRLQRLSHSGSRVRVGFRLCNSTGGDCFYRGY FT TSGVAAVQDWYHFHYVDILALLPAAWEDSHGSQDGHFVLSCSYDGLDCQARQFRTFHHP FT TYGSCYTVDGVWTAQRPGITHGVGLVLRVEQQPHLPLLSTLAGIRVMVHGRNHTPFLGH FT HSFSVRPGTEATISIREDEVHRLGSPYGHCTAGGEGVEVELLHNTSYTRQACLVSCFQQ FT LMVETCSCGYYLHPLPAGAEYCSSARHPAWGHCFYRLYQDLETHRLPCTSRCPRPCRES FT AFKLSTGTSRWPSAKSAGWTLATLGEQGLPHQSHRQRSSLAKINIVYQELNYRSVEEAP FT VYSVPQLLSAMGSLCSLWFGASVLSLLELLELLLDASALTLVLGGRRLRRAWFSWPRAS FT PASGASSIKPEASQMPPPAGGTSDDPEPSGPHLPRVMLPGVLAGVSAEESWAGPQPLET FT LDT" FT misc_feature 1222432..1223227 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT mRNA join(<1222489..1222679,1222888..1223216,1223319..1223417, FT 1225651..1225768,1225857..1225935,1226017..1226074, FT 1226275..>1226323) FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-005" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /note="match: ESTs: Em:BG766742.1 Em:BG767282.1" FT CDS join(<1222489..1222679,1222888..1223216,1223319..1223417, FT 1225651..1225768,1225857..1225935,1226017..1226074, FT 1226275..>1226323) FT /codon_start=2 FT /gene="SCNN1D" FT /locus_tag="RP5-902P8.9-005" FT /standard_name="OTTHUMP00000002086" FT /product="sodium channel, nonvoltage-gated 1, delta" FT /protein_id="CAI23263.1" FT /translation="ATARAATAFTEATRQAWRLSRTGTTSTMWISWPCCPRHGRTATGA FT RTATSSSPAVTMAWTARPDSSGPSTTPPTAAATRSMASGQLSAPASPTVGASPWPVRGQ FT GCRSGGLTPALGLPGVGLVLRVEQQPHLPLLSTLAGIRVMVHGRNHTPFLGHHSFSVRP FT GTEATISIREDEVHRLGSPYGHCTAGGEGVEVELLHNTSYTRQACLVSCFQQLMVETCS FT CGYYLHPLPAGAEYCSSARHPAWGHCFYRLYQDLETHRLPCTSRCPRPCRESAFKLSTG FT TSRWPSAKSAGWTLATLGEQGLPHQS" FT misc_feature 1222601..1223163 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 1223200..1223296 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 1223228 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1400bp by restriction digest data" FT misc_feature 1223229..1223296 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT polyA_signal 1227387..1227392 FT polyA_site 1227405 FT polyA_site 1227409 FT polyA_site complement(1227756) FT polyA_site complement(1227772) FT polyA_signal complement(1227784..1227789) FT polyA_site complement(1228250) FT polyA_signal complement(1228269..1228274) FT mRNA complement(join(1229879..1230008,1230098..1230388)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-010" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BQ349871.1" FT mRNA complement(join(1233217..1233313,1233393..1233621)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-008" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BF869725.1" FT mRNA complement(join(1231816..1232013,1233202..1233313, FT 1233393..1233493,1233565..1233645)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-009" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BU156426.1" FT mRNA complement(join(1228250..1229088,1229203..1229313, FT 1229470..1229579,1229782..1230008,1230098..1230196, FT 1230827..1230934,1231116..1231318,1231395..1231489, FT 1231591..1231660,1231805..1232013,1233202..1233313, FT 1233393..1233493,1233750..1233801,1233947..1234335)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-003" FT /product="centaurin, beta 5" FT /note="match: cDNAs: Em:BC047001.1" FT /note="match: ESTs: Em:BE783761.1" FT CDS complement(join(1228944..1229088,1229203..1229313, FT 1229470..1229579,1229782..1230008,1230098..1230196, FT 1230827..1230934,1231116..1231318,1231395..1231489, FT 1231591..1231660,1231805..1232013,1233202..1233313, FT 1233393..1233493,1233750..1233801,1233947..1233999)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-003" FT /standard_name="OTTHUMP00000002287" FT /product="centaurin, beta 5" FT /protein_id="CAI23264.1" FT /translation="MEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKKLKDALTVVVDDL FT RLCSVKPCEDIERRFCFEVLSPTKSCMLQADSEKLRQAWVQAVQASIASAYRESPDSCY FT SERLDRTASPSTSSIDSATDTRERGVKGESVLQRVQSVAGNSQCGDCGQPDPRWASINL FT GVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSAVNQIYEAQCEGAGS FT RKPTASSSRQDKEAWIKDKYVEKKFLRKAPMAPALEAPRRWRVQKCLRPHSSPRAPTAR FT RKVRLEPVLPCVAALSSVGTLDRKFRRDSLFCPDELDSLFSYFDAGAAGAGPRSLSSDS FT GLGGSSDGSSDVLAFGSGSVVDSVTEEEGAESEESSGEADGDTEAEAWGLADVRELHPG FT LLAHRAARARDLPALAAALAHGAEVNWADAEDEGKTPLVQAVLGGSLIVCEFLLQNGAD FT VNQRDSRGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQRDPLAIAVQAANADIVTL FT LRLARMAEEMREAEAAPGPPGALAGSPTELQFRRCIQEFISLHLEES" FT mRNA complement(join(1231846..1232013,1233202..1233313, FT 1233393..1233493,1233750..1233801,1233947..1234059, FT 1234725..1234997)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-011" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BI915179.1" FT misc_feature 1235427 FT /note="Clone_right_end: RP5-902P8" FT mRNA join(AL390719.47:112994..113017,AL390719.47:113357..113412, FT AL390719.47:113515..113580,AL390719.47:118280..118424, FT AL390719.47:118748..118828,AL390719.47:119125..119431, FT AL390719.47:119574..119692,AL390719.47:119822..119951, FT AL390719.47:120832..120906,AL390719.47:121452..121537, FT AL390719.47:121967..122138,AL390719.47:123011..123182, FT AL390719.47:124060..124200,1131980..1132096, FT 1132473..1132566,1132818..1133315) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-002" FT /product="tubulin tyrosine ligase-like family, member 10" FT /note="match: cDNAs: Em:AK124125.1 Em:BC027945.1" FT /note="match: ESTs: Em:AI918771.1 Em:AW449508.1 FT Em:BI772126.1 Em:BM559598.1 Em:BM559758.1 Em:BU609043.1" FT CDS join(AL390719.47:119145..119431,AL390719.47:119574..119692, FT AL390719.47:119822..119951,AL390719.47:120832..120906, FT AL390719.47:121452..121537,AL390719.47:121967..122138, FT AL390719.47:123011..123182,AL390719.47:124060..124200, FT 1131980..1132096,1132473..1132566,1132818..1133227) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-002" FT /standard_name="OTTHUMP00000000974" FT /product="tubulin tyrosine ligase-like family, member 10" FT /protein_id="CAI23266.1" FT /translation="MGSSQEEGLRCQPSQPDHDADGHCGPDLEGAERASATPGPPGLLN FT SHRPADSDDTNAAGPSAALLEGLLLGGGKPSPHSTRPGPFFYIGGSNGATIISSYCKSK FT GWQRIHDSRRDDYTLKWCEVKSRDSYGSFREGEQLLYQLPNNKLLTTKIGLLSTLRGRA FT RAMSKASKVPGGVQARLEKDAAAPALEDLPWTSPGYLRPQRVLRMEEFFPETYRLDLKH FT EREAFFTLFDETQIWICKPTASNQGKGIFLLRNQEEVAALQAKTRSMEDDPIHHKTPFR FT GPQARVVQRYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDL FT GGHLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKKRMQQ FT IMAHCFLAAKPKLDCKLGYFDLIGCDFLIDDNFKVWLLEMNSNPALHTNCEVLKEVIPG FT VVIETLDLVLETFRKSLRGQKMLPLLSQRRFVLLHNGEADPRPHLGGSCSLRRWPPLPT FT RQAKSSGPPMPHAPDQPGARRPAPPPLVPQRPRPPGPDLDSAHDGEPQAPGTEQSGTGN FT RHPAQEPSPGTAKEEREEPENARP" FT mRNA join(AL390719.47:124127..124200,1131766..1131868, FT 1131980..1132096,1132473..1132566,1132818..1132855) FT /gene="TTLL10" FT /locus_tag="RP5-902P8.1-003" FT /product="tubulin tyrosine ligase-like family, member 10" FT /note="match: ESTs: Em:AI805278.1" FT misc_feature 1237428..1319872 FT /note="annotated region of clone" FT mRNA complement(join(AL162741.44:111784..112158, FT 1238302..1238400)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-007" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BQ638874.1" FT CDS complement(join(AL162741.44:103676..103820, FT AL162741.44:103935..104045,AL162741.44:104202..104311, FT AL162741.44:104514..104740,AL162741.44:105559..105666, FT AL162741.44:105848..106050,AL162741.44:106127..106221, FT AL162741.44:106323..106392,AL162741.44:106537..106745, FT AL162741.44:107934..108045,AL162741.44:108125..108225, FT AL162741.44:108482..108533,AL162741.44:108679..108791, FT AL162741.44:109457..109468,AL162741.44:109943..110017, FT AL162741.44:110085..110180,AL162741.44:110270..110314, FT AL162741.44:110621..110804,AL162741.44:112100..112158, FT 1238302..1238355,1238542..1238640)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-004" FT /standard_name="OTTHUMP00000002288" FT /product="centaurin, beta 5" FT /note="match: proteins: Sw:Q96P50" FT /protein_id="CAI23170.1" FT /translation="MVEAGKAYVSTSRLFVSGVRDLSQQCQGDTVISECLQRFADSLQE FT VVNYHMILFDQAQRSVRQQLQSFVKEDVRKFKETKKQFDKVREDLELSLVRNAQAPRHR FT PHEVEEATGALTLTRKCFRHLALDYVLQINVLQAKKKFEILDSMLSFMHAQSSFFQQGY FT SLLHQLDPYMKKLAAELDQLVIDSAVEKREMERKHAAIQQRTLLQDFSYDESKVEFDVD FT APSGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKKLKDALTVVVDDLRLCSVKPC FT EDIERRFCFEVLSPTKSCMLQADSEKLRQAWVQAVQASIASAYRESPDSCYSERLDRTA FT SPSTSSIDSATDTRERGVKGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIEC FT SGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSAVNQIYEAQCEGAGSRKPTASSS FT RQDKEAWIKDKYVEKKFLRKAPMAPALEAPRRWRVQKCLRPHSSPRAPTARRKVRLEPV FT LPCVAALSSVGTLDRKFRRDSLFCPDELDSLFSYFDAGAAGAGPRKGAESEESSGEADG FT DTEAEAWGLADVRELHPGLLAHRAARARDLPALAAALAHGAEVNWADAEDEGKTPLVQA FT VLGGSLIVCEFLLQNGADVNQRDSRGRAPLHHATLLGRTGQVCLFLKRGADQHALDQEQ FT RDPLAIAVQAANADIVTLLRLARMAEEMREAEAAPGPPGALAGSPTELQFRRCIQEFIS FT LHLEES" FT mRNA complement(join(AL162741.44:102502..103820, FT AL162741.44:103935..104045,AL162741.44:104202..104311, FT AL162741.44:104514..104740,AL162741.44:105559..105666, FT AL162741.44:105848..106050,AL162741.44:106127..106221, FT AL162741.44:106323..106392,AL162741.44:106537..106745, FT AL162741.44:107934..108045,AL162741.44:108125..108225, FT AL162741.44:108482..108533,AL162741.44:108679..108791, FT AL162741.44:109457..109468,AL162741.44:109943..110017, FT AL162741.44:110085..110180,AL162741.44:110270..110314, FT AL162741.44:110621..110804,AL162741.44:112100..112158, FT 1238302..1238355,1238542..1238661,1239466..1241309)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-004" FT /product="centaurin, beta 5" FT /note="match: cDNAs: Em:AB051503.1 Em:AF411981.1" FT mRNA complement(join(1238590..1238661,1239466..1239523, FT 1242452..1242536,1243149..1243198)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-005" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:Z41009.1" FT mRNA complement(join(AL162741.44:102488..103820, FT AL162741.44:103935..104045,AL162741.44:104202..104311, FT AL162741.44:104514..104740,AL162741.44:104830..104928, FT AL162741.44:105559..105666,AL162741.44:105848..106050, FT AL162741.44:106127..106221,AL162741.44:106323..106392, FT AL162741.44:106537..106745,AL162741.44:107934..108045, FT AL162741.44:108125..108225,AL162741.44:108482..108533, FT AL162741.44:108679..108791,AL162741.44:109457..109468, FT AL162741.44:109943..110017,AL162741.44:110085..110180, FT AL162741.44:110270..110314,AL162741.44:110621..110804, FT AL162741.44:112100..112158,1238302..1238355, FT 1238542..1238661,1239466..1239523,1243149..1243398)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-001" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BF204201.1 Em:BG703878.1 FT Em:BG706905.1 Em:BG714104.1 Em:CB997445.1" FT /note="match: cDNAs: Em:BC021851.1 Em:BC029929.1 FT Em:BC051194.1" FT CDS complement(join(AL162741.44:103676..103820, FT AL162741.44:103935..104045,AL162741.44:104202..104311, FT AL162741.44:104514..104740,AL162741.44:104830..104928, FT AL162741.44:105559..105666,AL162741.44:105848..106050, FT AL162741.44:106127..106221,AL162741.44:106323..106392, FT AL162741.44:106537..106745,AL162741.44:107934..108045, FT AL162741.44:108125..108225,AL162741.44:108482..108533, FT AL162741.44:108679..108791,AL162741.44:109457..109468, FT AL162741.44:109943..110017,AL162741.44:110085..110180, FT AL162741.44:110270..110314,AL162741.44:110621..110804, FT AL162741.44:112100..112158,1238302..1238355, FT 1238542..1238661,1239466..1239523,1243149..1243195)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-001" FT /standard_name="OTTHUMP00000002285" FT /product="centaurin, beta 5" FT /note="match: proteins: Tr:Q86UT3" FT /protein_id="CAI23171.1" FT /translation="MTVEFEECVKDSPRFRATIDEVETDVVEIEAKLDKLVKLCSGMVE FT AGKAYVSTSRLFVSGVRDLSQQCQGDTVISECLQRFADSLQEVVNYHMILFDQAQRSVR FT QQLQSFVKEDVRKFKETKKQFDKVREDLELSLVRNAQAPRHRPHEVEEATGALTLTRKC FT FRHLALDYVLQINVLQAKKKFEILDSMLSFMHAQSSFFQQGYSLLHQLDPYMKKLAAEL FT DQLVIDSAVEKREMERKHAAIQQRTLLQDFSYDESKVEFDVDAPSGVVMEGYLFKRASN FT AFKTWNRRWFSIQNSQLVYQKKLKDALTVVVDDLRLCSVKPCEDIERRFCFEVLSPTKS FT CMLQADSEKLRQAWVQAVQASIASAYRESPDSCYSERLDRTASPSTSSIDSATDTRERG FT VKGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSL FT TLDSWEPELLKLMCELGNSAVNQIYEAQCEGAGSRKPTASSSRQDKEAWIKDKYVEKKF FT LRKAPMAPALEAPRRWRVQKCLRPHSSPRAPTARRKVRLEPVLPCVAALSSVGTLDRKF FT RRDSLFCPDELDSLFSYFDAGAAGAGPRSLSSDSGLGGSSDGSSDVLAFGSGSVVDSVT FT EEEGAESEESSGEADGDTEAEAWGLADVRELHPGLLAHRAARARDLPALAAALAHGAEV FT NWADAEDEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRDSRGRAPLHHATLLGRTGQVC FT LFLKRGADQHALDQEQRDPLAIAVQAANADIVTLLRLARMAEEMREAEAAPGPPGALAG FT SPTELQFRRCIQEFISLHLEES" FT mRNA complement(join(AL162741.44:111968..112158, FT 1238302..1238355,1238542..1238661,1239466..1239523, FT 1243149..1243210)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-006" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BF115217.1" FT mRNA join(1243947..1244100,1244295..1244352,1244466..1244653, FT 1244834..1244983,1245061..1245231,1246014..1246068, FT 1246289..1246451,1246710..1247057) FT /gene="PUSL1" FT /locus_tag="RP5-890O3.2-001" FT /product="pseudouridylate synthase-like 1" FT /note="match: cDNAs: Em:AK075292.1 Em:BC034304.1" FT mRNA join(1243991..1244100,1244466..1244653,1244834..1244983, FT 1245086..1245231,1246014..1246068,1246289..1246408) FT /gene="PUSL1" FT /locus_tag="RP5-890O3.2-005" FT /product="pseudouridylate synthase-like 1" FT /note="match: ESTs: Em:BI833278.1 Em:BQ227017.1" FT CDS join(1244024..1244100,1244295..1244352,1244466..1244653, FT 1244834..1244983,1245061..1245231,1246014..1246068, FT 1246289..1246451,1246710..1246759) FT /gene="PUSL1" FT /locus_tag="RP5-890O3.2-001" FT /standard_name="OTTHUMP00000003420" FT /product="pseudouridylate synthase-like 1" FT /protein_id="CAI23172.1" FT /translation="MSSAPASGSVRARYLVYFQYVGTDFNGVAAVRGTQRAVGVQNYLE FT EAAERLNSVEPVRFTISSRTDAGVHALSNAAHLDVQRRSGRPPFPPEVLAEALNTHLRH FT PAIRVLRAFRVPSDFHARHAATSRTYLYRLATGCHRRDELPVFERNLCWTLPADCLDMV FT AMQEAAQHLLGTHDFSAFQSAGSPVPSPVRTLRRVSVSPGQASPLVTPEESRKLRFWNL FT EFESQSFLYRQVRRMTAVLVAVGLGALAPAQVKTILESQDPLGKHQTRVAPAHGLFLKS FT VLYGNLGAASCTLQGPQFGSHG" FT mRNA join(1244168..1244352,1244466..1245220) FT /gene="PUSL1" FT /locus_tag="RP5-890O3.2-004" FT /product="pseudouridylate synthase-like 1" FT /note="match: ESTs: Em:BM925999.1" FT mRNA join(1244201..1244352,1244466..1244653,1244834..1244983, FT 1245061..1245231,1246014..1246068,1246289..1246449) FT /gene="PUSL1" FT /locus_tag="RP5-890O3.2-003" FT /product="pseudouridylate synthase-like 1" FT /note="match: ESTs: Em:BG767694.1 Em:BM808563.1 FT Em:BM915585.1" FT mRNA join(1244615..1244653,1244834..1245194,1245416..1246451, FT 1246710..1247056) FT /gene="PUSL1" FT /locus_tag="RP5-890O3.2-002" FT /product="pseudouridylate synthase-like 1" FT /note="match: cDNAs: Em:AK027721.1" FT mRNA complement(join(AL162741.44:108856..110017, FT AL162741.44:110085..110180,AL162741.44:110270..110314, FT AL162741.44:110621..110804,AL162741.44:112100..112158, FT 1238302..1238355,1238542..1238661,1239466..1239523, FT 1244822..>1244989)) FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-002" FT /product="centaurin, beta 5" FT /note="match: ESTs: Em:BU147763.1" FT /note="match: cDNAs: Em:AK093954.1 Em:AX748381.1" FT CDS complement(join(AL162741.44:109787..110017, FT AL162741.44:110085..110180,AL162741.44:110270..110314, FT AL162741.44:110621..110804,AL162741.44:112100..112158, FT 1238302..1238355,1238542..1238661,1239466..1239523, FT 1244822..>1244989)) FT /codon_start=2 FT /gene="CENTB5" FT /locus_tag="RP5-902P8.11-002" FT /standard_name="OTTHUMP00000002286" FT /product="centaurin, beta 5" FT /note="match: proteins: Tr:Q8N9S2" FT /protein_id="CAI23173.1" FT /translation="LTLPGESSIGCVQTPAAHHAGDSQWPGGTGRSGTWLRDERGSRWA FT LGRPAGPYGGRATIDEVETDVVEIEAKLDKLVKLCSGMVEAGKAYVSTSRLFVSGVRDL FT SQQCQGDTVISECLQRFADSLQEVVNYHMILFDQAQRSVRQQLQSFVKEDVRKFKETKK FT QFDKVREDLELSLVRNAQAPRHRPHEVEEATGALTLTRKCFRHLALDYVLQINVLQAKK FT KFEILDSMLSFMHAQSSFFQQGYSLLHQLDPYMKKLAAELDQLVIDSAVEKREMERKHA FT AIQQRVRPRSRLPAHQAPGRPLRPHPMPGTPSPPLPPACLPPALPTPSLGDQGCSL" FT polyA_site complement(1246977) FT polyA_site complement(1246979) FT polyA_site complement(1246980) FT polyA_signal complement(1246994..1246999) FT polyA_signal 1247036..1247041 FT polyA_site 1247057 FT mRNA complement(join(1246978..1247304,1247398..1247527, FT 1247606..1248081)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-021" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BG673957.1" FT mRNA complement(join(1246986..1247304,1247398..1247527, FT 1247606..1247881,1247973..1248329,1248415..1248972, FT 1249112..1250550)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-006" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BI918341.1" FT /note="match: cDNAs: Em:AK123641.1" FT mRNA complement(join(1247460..1247527,1247606..1247881, FT 1247973..1248080,1248167..1248329,1248415..1248504, FT 1248889..1248972,1249112..1249205)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-022" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BQ948215.1" FT mRNA complement(join(1247718..1248329,1248415..1248504, FT 1248889..1248972,1249112..1249160)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-020" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BM818827.1 Em:BM818844.1 FT Em:BM820910.1 Em:BM848819.1 Em:BQ950953.1" FT mRNA complement(join(1246969..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248972,1249112..1249301, FT 1249681..1249745,1250204..1250537,1250575..1250813)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-008" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:AB045994.1" FT mRNA complement(join(1248926..1248972,1249112..1249301, FT 1249681..1249745,1250204..1250342,1250784..1250962)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-019" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BE254233.1" FT mRNA complement(join(1249793..1250342,1250784..1250818, FT 1250900..1250948)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-018" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:CB268824.1" FT mRNA complement(join(1246982..1247304,1247398..1247527, FT 1247606..1247748,1247973..1248080,1248167..1248329, FT 1248415..1248504,1248889..1248972,1249112..1249301, FT 1249681..1249745,1250204..1250342,1250784..1250818, FT 1250900..1250998,1251537..1252830)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-005" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:BC047576.1" FT mRNA complement(join(1252961..1253279,1254003..1254069)) FT /locus_tag="RP5-890O3.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW204016.1" FT polyA_site complement(1254061) FT mRNA complement(join(1246986..1247129,1247199..1247304, FT 1247398..1247527,1247606..1247748,1247820..1247881, FT 1247973..1248080,1248167..1248329,1248415..1248504, FT 1248889..1248972,1249112..1249301,1249681..1249745, FT 1250204..1250342,1250784..1250818,1250900..1250932, FT 1254676..1254904,1255836..1255909,1256376..1256473, FT 1259961..>1260050)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-023" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:AU134084.1" FT /note="match: cDNAs: Em:AK023356.1" FT mRNA complement(join(1246977..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1254676..1254904, FT 1255836..1255909,1256376..1256473,1259961..>1260071)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-001" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BG681895.1 Em:BI463620.1 FT Em:BI550584.1 Em:BM791441.1 Em:BQ427819.1 Em:BQ879432.1 FT Em:BQ948215.1 Em:BX421645.1 Em:BX462758.1 Em:CB153958.1" FT /note="match: cDNAs: Em:AK000549.1 Em:AL136813.1 FT Em:BC007978.1" FT CDS complement(join(1247239..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1254676..1254904, FT 1255836..1255909,1256376..1256473,1259961..>1260071)) FT /codon_start=3 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-001" FT /standard_name="OTTHUMP00000003390" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: proteins: Tr:Q96HY1 Tr:Q9H0F9 Tr:Q9NWX9" FT /protein_id="CAI23177.1" FT /translation="GSCSEVVAPAQCITAGGPRGSGSAAETMPEIRVTPLGAGQDVGRS FT CILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGAL FT PYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAV FT HLHQTVQVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKC FT RPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLET FT FWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFA FT DNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEM FT EGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQEL FT RVNCYMPANGETVTLPTSPSIPVGISLGLLKREMAQGLLPEAKKPRLLHGTLIMKDSNF FT RLVSSEQALKELGLAEHQLRFTCRVHLHDTRKEQETALRVYSHLKSVLKDHCVQHLPDG FT SVTVESVLLQAAAPSEDPGTKVLLVSWTYQDEELGSFLTSLLKKGLPQAPS" FT mRNA complement(join(1246980..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1254676..1254813, FT 1255836..1256473,1259961..1260001)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-004" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:BC042444.1" FT mRNA complement(join(1246986..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249485,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1259961..1260017)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-007" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:AK092190.1" FT mRNA complement(join(1246986..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1256376..1256473, FT 1259961..>1260033)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-009" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:AK021939.1" FT CDS complement(join(1247239..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1256376..1256473, FT 1259961..>1260033)) FT /codon_start=1 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-009" FT /standard_name="OTTHUMP00000003391" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: proteins: Tr:Q9HAA6" FT /protein_id="CAI23176.1" FT /translation="ITAGGPRGSGSAAETMPEIRVTPLGAGQDVGRSCILVSIAGKNVM FT LDCGMHMGFNDDVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAA FT WIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELC FT ILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAF FT DRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQ FT RKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEAKKMEFLKQK FT IEQELRVNCYMPANGETVTLPTSPSIPVGISLGLLKREMAQGLLPEAKKPRLLHGTLIM FT KDSNFRLVSSEQALKELGLAEHQLRFTCRVHLHDTRKEQETALRVYSHLKSVLKDHCVQ FT HLPDGSVTVESVLLQAAAPSEDPGTKVLLVSWTYQDEELGSFLTSLLKKGLPQAPS" FT mRNA complement(join(1246982..1247304,1247398..1247527, FT 1247606..1247736,1248258..1248329,1248415..1248504, FT 1248889..1248972,1249112..1249301,1249681..1249702, FT 1254720..1254904,1255836..1255909,1256376..1256473, FT 1259961..>1260024)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-010" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:BC008041.1 Em:BC020199.1" FT CDS complement(join(1247239..1247304,1247398..1247527, FT 1247606..1247736,1248258..1248329,1248415..1248504, FT 1248889..1248972,1249112..1249301,1249681..1249702, FT 1254720..1254904,1255836..1255909,1256376..1256473, FT 1259961..>1260024)) FT /codon_start=1 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-010" FT /standard_name="OTTHUMP00000003392" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: proteins: Tr:Q96HV7" FT /protein_id="CAI23178.1" FT /translation="GGPRGSGSAAETMPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDC FT GMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYM FT THPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCILLETFWERMNLKVPIYFSTGL FT TEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHA FT GQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSF FT SAHADAKGIMQLVSSEQALKELGLAEHQLRFTCRVHLHDTRKEQETALRVYSHLKSVLK FT DHCVQHLPDGSVTVESVLLQAAAPSEDPGTKVLLVSWTYQDEELGSFLTSLLKKGLPQA FT PS" FT mRNA complement(join(1246981..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1258561..1258667, FT 1259961..>1260053)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-011" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BG901041.1 Em:BM804871.1 FT Em:BM804930.1" FT /note="match: cDNAs: Em:AK058018.1" FT CDS complement(join(1247239..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1258561..1258667, FT 1259961..>1260053)) FT /codon_start=3 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-011" FT /standard_name="OTTHUMP00000003393" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /protein_id="CAI23179.1" FT /translation="VAPAQCITAGGPRGSGSAAETMPEIRVTPLGACPVLSWNLVLPPG FT RGSRAPSSTDTRTGFHVLPHGVDDELEIKAYYAGHVLGAAMFQIKVGSESVVYTGDYNM FT TPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVF FT ALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNM FT FEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGT FT VGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQLVGQAEPESVLLVHGEA FT KKMEFLKQKIEQELRVNCYMPANGETVTLPTSPSIPVGISLGLLKREMAQGLLPEAKKP FT RLLHGTLIMKDSNFRLVSSEQALKELGLAEHQLRFTCRVHLHDTRKEQETALRVYSHLK FT SVLKDHCVQHLPDGSVTVESVLLQAAAPSEDPGTKVLLVSWTYQDEELGSFLTSLLKKG FT LPQAPS" FT mRNA complement(join(1246986..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250998,1254676..1254904, FT 1255836..1255909,1256376..1256473,1257288..1257364, FT 1258272..1258667,1259961..1259989)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-012" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:AK056652.1" FT CDS complement(join(1247239..1247304,1247398..1247527, FT 1247606..1247748,1247820..1247881,1247973..1248080, FT 1248167..1248329,1248415..1248504,1248889..1248972, FT 1249112..1249301,1249681..1249745,1250204..1250342, FT 1250784..1250818,1250900..1250932,1254676..1254904, FT 1255836..1255909,1256376..1256473,1259961..>1260050)) FT /codon_start=3 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-023" FT /standard_name="OTTHUMP00000003397" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: proteins: Tr:Q9H8R5" FT /protein_id="CAI23174.1" FT /translation="APAQCITAGGPRGSGSAAETMPEIRVTPLGAGQDVGRSCILVSIA FT GKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMV FT GYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQ FT IKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKK FT VHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFI FT PWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAG FT NEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMSFSAHADAKGIMQL FT VGQAEPESVLLVHGEAKKMEFLKQKIEQELRVNCYMPANGETVTLPTSPSIPVGISLGL FT LKREMAQGLLPEAKKPRLLHGTLIMKDSNFRLVSSEQALKELGLAEHQLRFTCRVHLHD FT TRKEQETALRVYSHLKSVLKDHCVQHLPDGSVTVESVLLQAAAPSEDPGTKVLLVSWTY FT QDEELGSFLTSLLKKGLPQAPS" FT mRNA complement(join(<1248904..1248972,1249112..1249301, FT 1249681..1249745,1250204..1250342,1254452..1254904, FT 1255836..1255909,1256376..1256473,1259961..>1260010)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-017" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BX459932.1" FT CDS complement(join(<1248904..1248972,1249112..1249301, FT 1249681..1249745,1250204..1250342,1254452..1254904, FT 1255836..1255909,1256376..1256473,1259961..>1260010)) FT /codon_start=2 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-017" FT /standard_name="OTTHUMP00000003396" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /protein_id="CAI23180.1" FT /translation="SGSAAETMPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMG FT FNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQ FT AICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVRFPGPQLAQSLP FT TPTPTMPSARSTQFLEGWGLRVSPPHLTLASSTVGTPGGVSARMRVPDQTGRRPGRARA FT GWGAAWIDKCRPNLLITESTYATTIRDSKRCRERDFLKKVHETVERGGKVLIPVFALGR FT AQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFK FT HIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAG" FT mRNA complement(join(<1250258..1250342,1250784..1250818, FT 1250900..1250998,1254676..1254904,1255836..1255909, FT 1256376..1256473,1257288..1257364,1258561..1258667, FT 1259961..>1260005)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-013" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BQ889778.1" FT CDS complement(join(<1250258..1250342,1250784..1250818, FT 1250900..1250998,1254676..1254904,1255836..1255909, FT 1256376..1256473,1257288..1257364,1258561..1258667, FT 1259961..>1260005)) FT /codon_start=1 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-013" FT /standard_name="OTTHUMP00000003394" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /protein_id="CAI23181.1" FT /translation="GARRRRCLRSESRPWVPALCCPGTWSFHRAGGRGHLPAQTPGRDS FT MSSPMAQPLGCGPVILMCGAGFGHFEWLAGGGAGQDVGRSCILVSIAGKNVMLDCGMHM FT GFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPT FT QAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYA FT GHVLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSK FT RC" FT mRNA complement(join(1254061..1254904,1255836..1256473, FT 1259961..1260051)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-002" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:AK027767.1" FT mRNA complement(join(1254059..1254904,1255836..1255909, FT 1256376..1256473,1259961..>1260046)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-016" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BF981929.1 Em:BQ957645.1 FT Em:BX376730.1 Em:BX376731.1 Em:CA488934.1" FT CDS complement(join(1254235..1254904,1255836..1255909, FT 1256376..1256473,1259961..>1260046)) FT /codon_start=2 FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-016" FT /standard_name="OTTHUMP00000003395" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /protein_id="CAI23182.1" FT /translation="PAQCITAGGPRGSGSAAETMPEIRVTPLGAGQDVGRSCILVSIAG FT KNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDFLDCVIISHFHLDHCGALPYFSEMVG FT YDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQV FT RFPGPQLAQSLPTPTPTMPSARSTQFLEGWGLRVSPPHLTLASSTVGTPGGVSARMRVP FT DQTGRRPGRARAGWGYAPAYEPTRLCPSGIEMARVGQAGALRALGAARDSLELPGCCRA FT GRQGLEGRWASSGGCLVLGVGQGRSEG" FT mRNA complement(join(1254778..1254904,1255836..1255909, FT 1256376..1256473,1258561..1258667,1259961..1260046)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-024" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BG901041.1" FT mRNA complement(join(1254440..1255085,1255836..1255909, FT 1256376..1256473,1259961..1260006)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-015" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:CA487468.1" FT mRNA complement(join(1254850..1255085,1255836..1256062, FT 1256376..1256473,1259961..1259983)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-025" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BE792943.1" FT mRNA complement(join(1254761..1255223,1255836..1255909, FT 1256376..1256473,1259961..1260029)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-014" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: ESTs: Em:BG423210.1" FT mRNA complement(join(1254077..1256473,1259961..1259991)) FT /gene="CPSF3L" FT /locus_tag="RP5-890O3.8-003" FT /product="cleavage and polyadenylation specific factor FT 3-like" FT /note="match: cDNAs: Em:AK022675.1" FT mRNA join(1260136..1260482,1262621..1263374) FT /locus_tag="RP5-890O3.7-002" FT /product="novel protein" FT /note="match: ESTs: Em:BG762985.1 Em:BI465292.1 FT Em:BI765480.1 Em:BQ709290.1" FT mRNA join(1260147..1260482,1262216..1262412,1262621..1264277) FT /locus_tag="RP5-890O3.7-001" FT /product="novel protein" FT /note="match: ESTs: Em:AW518892.1 Em:BG722039.1 FT Em:BG775646.1 Em:BI764232.1 Em:BQ928421.1 Em:BU542252.1 FT Em:CB265558.1" FT /note="match: cDNAs: Em:AK040664.1 Em:AL122073.1 FT Em:BC002216.1 Em:BC004366.1" FT mRNA join(1260621..1260975,1262216..1262412,1262621..1262851) FT /locus_tag="RP5-890O3.7-003" FT /product="novel protein" FT /note="match: ESTs: Em:BI520448.1 Em:BM552818.1" FT CDS join(1262291..1262412,1262621..1263143) FT /locus_tag="RP5-890O3.7-001" FT /standard_name="OTTHUMP00000003206" FT /product="novel protein" FT /note="match: proteins: Tr:Q8BS40 Tr:Q99LU9" FT /protein_id="CAI23183.1" FT /translation="MDDSETGFNLKVVLVSFKQCLDEKEEVLLDPYIASWKGLVRFLNS FT LGTIFSFISKDVVSKLRIMERLRGGPQSEHYRSLQAMVAHELSNRLVDLERRSHHPESG FT CRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADSYNASLAAYHPWVVRRAVTVAFC FT TLPTREVFLEAMNVGPPEQAVQMLGEALPFIQRVYNVSQKLYAEHSLLDLP" FT polyA_signal 1264235..1264240 FT polyA_site 1264272 FT polyA_site 1264276 FT mRNA join(1266694..1266916,1267018..1267318,1267404..1268186, FT 1268301..1268504,1268639..1268759,1268886..1270686) FT /gene="TAS1R3" FT /locus_tag="RP5-890O3.6-001" FT /product="taste receptor, type 1, member 3" FT /note="match: cDNAs: Em:AB049994.1 Em:AF311386.1 FT Em:AF337039.1 Em:AF456324.1 Em:AK122959.1 Em:AY032620.1 FT Em:AY032621.1" FT CDS join(1266726..1266916,1267018..1267318,1267404..1268186, FT 1268301..1268504,1268639..1268759,1268886..1269844) FT /gene="TAS1R3" FT /locus_tag="RP5-890O3.6-001" FT /standard_name="OTTHUMP00000003108" FT /product="taste receptor, type 1, member 3" FT /note="match: proteins: Sw:Q7RTX0 Sw:Q923K1 Sw:Q925D8" FT /protein_id="CAI23184.1" FT /translation="MLGPAVLGLSLWALLHPGTGAPLCLSQQLRMKGDYVLGGLFPLGE FT AEEAGLRSRTRPSSPVCTRFSSNGLLWALAMKMAVEEINNKSDLLPGLRLGYDLFDTCS FT EPVVAMKPSLMFLAKAGSRDIAAYCNYTQYQPRVLAVIGPHSSELAMVTGKFFSFFLMP FT QVSYGASMELLSARETFPSFFRTVPSDRVQLTAAAELLQEFGWNWVAALGSDDEYGRQG FT LSIFSALAAARGICIAHEGLVPLPRADDSRLGKVQDVLHQVNQSSVQVVLLFASVHAAH FT ALFNYSISSRLSPKVWVASEAWLTSDLVMGLPGMAQMGTVLGFLQRGAQLHEFPQYVKT FT HLALATDPAFCSALGEREQGLEEDVVGQRCPQCDCITLQNVSAGLNHHQTFSVYAAVYS FT VAQALHNTLQCNASGCPAQDPVKPWQLLENMYNLTFHVGGLPLRFDSSGNVDMEYDLKL FT WVWQGSVPRLHDVGRFNGSLRTERLKIRWHTSDNQKPVSRCSRQCQEGQVRRVKGFHSC FT CYDCVDCEAGSYRQNPDDIACTFCGQDEWSPERSTRCFRRRSRFLAWGEPAVLLLLLLL FT SLALGLVLAALGLFVHHRDSPLVQASGGPLACFGLVCLGLVCLSVLLFPGQPSPARCLA FT QQPLSHLPLTGCLSTLFLQAAEIFVESELPLSWADRLSGCLRGPWAWLVVLLAMLVEVA FT LCTWYLVAFPPEVVTDWHMLPTEALVHCRTRSWVSFGLAHATNATLAFLCFLGTFLVRS FT QPGCYNRARGLTFAMLAYFITWVSFVPLLANVQVVLRPAVQMGALLLCVLGILAAFHLP FT RCYLLMRQPGLNTPEFFLGGGPGDAQGQNDGNTGNQGKHE" FT polyA_site complement(1270656) FT polyA_signal complement(1270678..1270683) FT misc_feature 1282682..1282695 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 1282851..1282956 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 1282860 FT /note="Weak data" FT mRNA complement(join(1270656..1271895,1273357..1273563, FT 1273649..1273816,1273902..1274033,1274742..1274819, FT 1274962..1275029,1275116..1275192,1275418..1275557, FT 1275627..1275696,1275790..1275883,1277047..1277185, FT 1277433..1277536,1277743..1277864,1278069..1278138, FT 1284276..1284492)) FT /gene="DVL1" FT /locus_tag="RP5-890O3.5-001" FT /product="dishevelled, dsh homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF006011.1 Em:AY665280.1 FT Em:BC025292.1" FT /note="match: ESTs: Em:AU129997.1 Em:AW262005.1 FT Em:BE348842.1 Em:BM549186.1 Em:BM549921.1 Em:BM562918.1 FT Em:CF132269.1" FT CDS complement(join(1271522..1271895,1273357..1273563, FT 1273649..1273816,1273902..1274033,1274742..1274819, FT 1274962..1275029,1275116..1275192,1275418..1275557, FT 1275627..1275696,1275790..1275883,1277047..1277185, FT 1277433..1277536,1277743..1277864,1278069..1278138, FT 1284276..1284445)) FT /gene="DVL1" FT /locus_tag="RP5-890O3.5-001" FT /standard_name="OTTHUMP00000003104" FT /product="dishevelled, dsh homolog 1 (Drosophila)" FT /note="match: proteins: Sw:O14640" FT /protein_id="CAI23185.1" FT /translation="MAETKIIYHMDEEETPYLVKLPVAPERVTLADFKNVLSNRPVHAY FT KFFFKSMDQDFGVVKEEIFDDNAKLPCFNGRVVSWLVLAEGAHSDAGSQGTDSHTDLPP FT PLERTGGIGDSRPPSFHPNVASSRDGMDNETGTESMVSHRRERARRRNREEAARTNGHP FT RGDRRRDVGLPPDSASTALSSELESSSFVDSDEDGSTSRLSSSTEQSTSSRLIRKHKRR FT RRKQRLRQADRASSFSSITDSTMSLNIVTVTLNMERHHFLGISIVGQSNDRGDGGIYIG FT SIMKGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLREIVSQTGPISLTVAKCWD FT PTPRSYFTVPRADPVRPIDPAAWLSHTAALTGALPRYELEEAPLTVKSDMSAVVRVMQL FT PDSGLEIRDRMWLKITIANAVIGADVVDWLYTHVEGFKERREARKYASSLLKHGFLRHT FT VNKITFSEQCYYVFGDLCSNLATLNLNSGSSGTSDQDTLAPLPHPAAPWPLGQGYPYQY FT PGPPPCFPPAYQDPGFSYGSGSTGSQQSEGSKSSGSTRSSRRAPGREKERRAAGAGGSG FT SESDHTAPSGVGSSWRERPAGQLSRGSSPRSQASATAPGLPPPHPTTKAYTVVGGPPGG FT PPVRELAAVPPELTGSRQSFQKAMGNPCEFFVDIM" FT mRNA complement(join(1270658..1271895,1273357..1273563, FT 1273649..1273748,1275835..1275883,1277047..1277185, FT 1277433..1277536,1277743..1277864,1278069..1278138, FT 1284276..1284515)) FT /gene="DVL1" FT /locus_tag="RP5-890O3.5-002" FT /product="dishevelled, dsh homolog 1 (Drosophila)" FT /note="match: ESTs: Em:BM551117.1" FT /note="match: cDNAs: Em:BC050454.1" FT mRNA complement(join(1270656..1271895,1273357..1273563, FT 1273649..1273816,1273902..1274033,1274667..1274819, FT 1274962..1275029,1275116..1275192,1275418..1275557, FT 1275627..1275696,1275790..1275883,1277047..1277185, FT 1277433..1277536,1277743..1277864,1278069..1278138, FT 1284276..1284730)) FT /gene="DVL1" FT /locus_tag="RP5-890O3.5-004" FT /product="dishevelled, dsh homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AK093189.1 Em:AX747980.1 FT Em:AY665235.1 Em:U10115.1" FT /note="match: ESTs: Em:BM544722.1" FT CDS complement(join(1271522..1271895,1273357..1273563, FT 1273649..1273816,1273902..1274033,1274667..1274819, FT 1274962..1275029,1275116..1275192,1275418..1275557, FT 1275627..1275696,1275790..1275883,1277047..1277185, FT 1277433..1277536,1277743..1277864,1278069..1278138, FT 1284276..1284445)) FT /gene="DVL1" FT /locus_tag="RP5-890O3.5-004" FT /standard_name="OTTHUMP00000003106" FT /product="dishevelled, dsh homolog 1 (Drosophila)" FT /note="match: proteins: Sw:O14640.2 Sw:P51141.1" FT /protein_id="CAI23187.1" FT /translation="MAETKIIYHMDEEETPYLVKLPVAPERVTLADFKNVLSNRPVHAY FT KFFFKSMDQDFGVVKEEIFDDNAKLPCFNGRVVSWLVLAEGAHSDAGSQGTDSHTDLPP FT PLERTGGIGDSRPPSFHPNVASSRDGMDNETGTESMVSHRRERARRRNREEAARTNGHP FT RGDRRRDVGLPPDSASTALSSELESSSFVDSDEDGSTSRLSSSTEQSTSSRLIRKHKRR FT RRKQRLRQADRASSFSSITDSTMSLNIVTVTLNMERHHFLGISIVGQSNDRGDGGIYIG FT SIMKGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLREIVSQTGPISLTVAKCWD FT PTPRSYFTVPRADPVRPIDPAAWLSHTAALTGALPRYGTSPCSSAVTRTSSSSLTSSVP FT GAPQLEEAPLTVKSDMSAVVRVMQLPDSGLEIRDRMWLKITIANAVIGADVVDWLYTHV FT EGFKERREARKYASSLLKHGFLRHTVNKITFSEQCYYVFGDLCSNLATLNLNSGSSGTS FT DQDTLAPLPHPAAPWPLGQGYPYQYPGPPPCFPPAYQDPGFSYGSGSTGSQQSEGSKSS FT GSTRSSRRAPGREKERRAAGAGGSGSESDHTAPSGVGSSWRERPAGQLSRGSSPRSQAS FT ATAPGLPPPHPTTKAYTVVGGPPGGPPVRELAAVPPELTGSRQSFQKAMGNPCEFFVDI FT M" FT mRNA complement(join(1277150..1277536,1277743..1277864, FT 1278069..1278138,1284276..1284335)) FT /gene="DVL1" FT /locus_tag="RP5-890O3.5-005" FT /product="dishevelled, dsh homolog 1 (Drosophila)" FT /note="match: ESTs: Em:AL047168.1 Em:DA434938.1" FT mRNA complement(join(1270659..1271895,1273357..1273563, FT 1273649..1273816,1273902..1274033,1274742..1274819, FT 1274962..1275192,1275418..1275471,1284727..1284760)) FT /gene="DVL1" FT /locus_tag="RP5-890O3.5-003" FT /product="dishevelled, dsh homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AK095867.1" FT polyA_site complement(1288071) FT polyA_signal complement(1288089..1288094) FT mRNA complement(join(1288069..1289009,1289228..1289308, FT 1289410..1289486,1289573..1289644)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-004" FT /product="matrix-remodelling associated 8" FT /note="match: cDNAs: Em:AL050202.1" FT mRNA complement(join(1288595..1289308,1289410..1289486, FT 1289573..1289627)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-008" FT /product="matrix-remodelling associated 8" FT /note="match: ESTs: Em:BQ717862.1" FT mRNA complement(join(1288572..1289308,1289410..1289486, FT 1289573..1289612,1289734..1289854)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-007" FT /product="matrix-remodelling associated 8" FT /note="match: ESTs: Em:BG830618.1" FT mRNA complement(join(1288819..1289009,1289228..1289308, FT 1289410..1289486,1289573..1289889,1290062..1290396)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-009" FT /product="matrix-remodelling associated 8" FT /note="match: ESTs: Em:BI754114.1 Em:BI758715.1" FT mRNA complement(join(1290463..1290532,1290624..1290892)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-005" FT /product="matrix-remodelling associated 8" FT /note="match: ESTs: Em:AI201332.1" FT mRNA complement(join(1290384..1290725,1290830..1290892)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-006" FT /product="matrix-remodelling associated 8" FT /note="match: ESTs: Em:AI042566.1" FT mRNA complement(join(1288072..1288712,1289228..1289326, FT 1289410..1289486,1289573..1289612,1289734..1289889, FT 1290062..1290532,1290624..1290725,1290830..1291132, FT 1292061..1292084,1293836..1293923)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-003" FT /product="matrix-remodelling associated 8" FT /note="match: cDNAs: Em:AK027269.1" FT CDS complement(join(1288681..1288712,1289228..1289326, FT 1289410..1289486,1289573..1289612,1289734..1289889, FT 1290062..1290532,1290624..1290725,1290830..1291132, FT 1292061..1292084,1293836..1293884)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-003" FT /standard_name="OTTHUMP00000003098" FT /product="matrix-remodelling associated 8" FT /note="match: proteins: Tr:Q96KC3" FT /protein_id="CAI23188.1" FT /translation="MALPSRILLWKLVLLQSSAVLLHSGSSVPAAAGSSVVSESAVSWE FT AGARAVLRCQSPRMVWTQDRLHDRQRVLHWDLRGPGGGPARRLLDLYSAGEQRVYEARD FT RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHHHYCHLYESLAVRLEVTDGPPAT FT PAYWDGEKEVLAVARGAPALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRL FT LDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHYCGL FT HERRVFHLTVAEPHAEPPPRGSPGNGSSHSGAPGPDPTLARGHNVINVIVPESRAHFFQ FT QLGYVLATLLLFILLLVTVLLAARRRRGGYEYSDQKSGKSKGKDVNLAEFAVAAGDQML FT YRSEDIQLASSPPTDYKNNILKERAELAHSPLPAKYIDLDKDPSGLCPLGA" FT mRNA complement(join(1288071..1289009,1289228..1289308, FT 1289410..1289486,1289573..1289612,1289734..1289889, FT 1290062..1290532,1290624..1290725,1290830..1291132, FT 1292061..1292084,1293836..1293915)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-001" FT /product="matrix-remodelling associated 8" FT /note="match: ESTs: Em:AI146845.1 Em:AI887475.1 FT Em:AW888223.1 Em:BF732543.1 Em:CD674585.1" FT /note="match: cDNAs: Em:BC006213.1" FT CDS complement(join(1288984..1289009,1289228..1289308, FT 1289410..1289486,1289573..1289612,1289734..1289889, FT 1290062..1290532,1290624..1290725,1290830..1291132, FT 1292061..1292084,1293836..1293884)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-001" FT /standard_name="OTTHUMP00000003099" FT /product="matrix-remodelling associated 8" FT /note="match: proteins: Tr:Q9BRK3" FT /protein_id="CAI23189.1" FT /translation="MALPSRILLWKLVLLQSSAVLLHSGSSVPAAAGSSVVSESAVSWE FT AGARAVLRCQSPRMVWTQDRLHDRQRVLHWDLRGPGGGPARRLLDLYSAGEQRVYEARD FT RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHHHYCHLYESLAVRLEVTDGPPAT FT PAYWDGEKEVLAVARGAPALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRL FT LDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHYCGL FT HERRVFHLTVAEPHAEPPPRGSPGNGSSHSGAPGPDPTLARGHNVINVIVPESRAHFFQ FT QLGYVLATLLLFILLLVTVLLAARRRRGGYEYSDQKSGKSKGKDVNLAEFAVAAGDQML FT YRSEDIQLDYKNNILKERAELAHSPLPAKYIDLDKGFRKENCK" FT mRNA complement(join(1288072..1288352,1288456..1289009, FT 1289228..1289308,1289410..1289486,1289573..1289612, FT 1289734..1289889,1290062..1290532,1290624..1290725, FT 1290830..1291132,1292061..1292084,1296622..1297157)) FT /gene="MXRA8" FT /locus_tag="RP5-890O3.4-002" FT /product="matrix-remodelling associated 8" FT /note="match: ESTs: Em:BF434483.1" FT /note="match: cDNAs: Em:AK095966.1" FT misc_feature 1303713 FT /note="Clone_left_end: RP4-787L24" FT polyA_site complement(1309113) FT polyA_site complement(1309116) FT polyA_signal complement(1309131..1309136) FT CDS complement(join(1309181..1309282,1309380..1309825, FT 1310085..1310136)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-001" FT /standard_name="OTTHUMP00000001518" FT /product="aurora kinase A interacting protein 1" FT /note="match: proteins: Sw:Q9NWT8" FT /protein_id="CAI23191.1" FT /translation="MLLGRLTSQLLRAVPWAGGRPPWPVSGVLGSRVCGPLYSTSPAGP FT GRAASLPRKGAQLELEEMLVPRKMSVSPLESWLTARCFLPRLDTGTAGTVAPPQSYQCP FT PSQIGEGAEQGDEGVADAPQIQCKNVLKIRRRKMNHHKYRKLVKKTRFLRRKVQEGRLR FT RKQIKFEKDLRRIWLKAGLKEAPEGWQTPKIYLRGK" FT mRNA complement(join(1309110..1309282,1309380..1309825, FT 1310085..1310537)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-002" FT /product="aurora kinase A interacting protein 1" FT /note="match: ESTs: Em:BM561381.1 Em:BQ650515.1 FT Em:BQ689393.1" FT /note="match: cDNAs: Em:BC022808.1" FT mRNA complement(join(1309818..1309970,1310085..1310539)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-004" FT /product="aurora kinase A interacting protein 1" FT /note="match: ESTs: Em:AI082366.1 Em:AI797782.1 FT Em:BG324849.1" FT mRNA complement(join(1309117..1309282,1309380..1309825, FT 1310085..1310170,1310377..1310553)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-003" FT /product="aurora kinase A interacting protein 1" FT /note="match: ESTs: Em:BU146851.1 Em:BU553401.1" FT /note="match: cDNAs: Em:BC035595.1" FT mRNA complement(join(1309624..1310170,1310377..1310524)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-005" FT /product="aurora kinase A interacting protein 1" FT /note="match: ESTs: Em:BE384924.1 Em:BE385851.1 FT Em:BE388305.1 Em:BE389654.1 Em:BE390616.1" FT mRNA complement(join(1309112..1309282,1309380..1309825, FT 1310085..1310170,1310455..1310549)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-006" FT /product="aurora kinase A interacting protein 1" FT /note="match: ESTs: Em:BQ927531.1" FT mRNA complement(join(1309110..1309282,1309380..1309825, FT 1310085..1310170,1310534..1310875)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-001" FT /product="aurora kinase A interacting protein 1" FT /note="match: ESTs: Em:BF664406.1 Em:BF973085.1 FT Em:BG339638.1 Em:BG540232.1 Em:BI198248.1 Em:BM724902.1 FT Em:CB997117.1" FT /note="match: cDNAs: Em:AK000615.1" FT mRNA complement(join(1309116..1309282,1309380..1309706, FT 1310110..1310170,1310534..1310554)) FT /gene="AURKAIP1" FT /locus_tag="RP5-890O3.1-007" FT /product="aurora kinase A interacting protein 1" FT /note="match: cDNAs: Em:BC046345.1" FT CDS 1314044..1314412 FT /pseudo FT /locus_tag="RP5-890O3.3-001" FT /product="NADH dehydrogenase (ubiquinone) 1 beta subcomplex FT 4 15kDa (NDUFB4) pseudogene" FT /note="match: proteins: Sw:O95168 Sw:P48305 Sw:Q9CQC7 FT Tr:P48305 Tr:Q8N4D3 Tr:Q9CQC7" FT misc_feature 1317872 FT /note="Clone_right_end: RP5-890O3" FT misc_feature 1319873..1326528 FT /note="annotated region of clone" FT polyA_site complement(1321091) FT polyA_signal complement(1321107..1321112) FT polyA_site complement(1321875) FT polyA_signal complement(1321896..1321901) FT misc_feature 1322811 FT /note="Clone_left_end: RP4-758J18" FT mRNA complement(join(<1321875..1322962,1323157..1323249, FT 1323334..1324093)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-016" FT /product="cyclin L2" FT /note="match: ESTs: Em:AV723014.1 Em:AV723037.2 FT Em:BG142177.1 Em:BP375802.1 Em:W18192.1" FT mRNA complement(join(<1321091..1322962,1323157..1323249, FT 1323334..1323445,1323872..1323890,1324006..1324123, FT 1325610..1325751,1325839..1325943,1326146..1326476)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-013" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK000685.1" FT mRNA complement(join(<1322923..1322962,1323157..1323249, FT 1323334..1323445,1324006..1324123,1325610..1325751, FT 1325839..1325943,1326146..1326280)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-015" FT /product="cyclin L2" FT /note="match: ESTs: Em:BX502689.1 Em:BX644818.1" FT mRNA complement(join(1324726..1324853,1325610..1325751, FT 1325839..1325943,1326146..1326384)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-008" FT /product="cyclin L2" FT /note="match: ESTs: Em:BM836635.1" FT mRNA join(AL391244.11:57744..58053,AL391244.11:58401..58475, FT AL391244.11:58730..58839,AL391244.11:61558..61678, FT AL391244.11:63612..63676,AL391244.11:64269..64282, FT complement(1326146..1326245),complement(1325839..1325943), FT complement(1325610..1325751),complement(1323334..1323445), FT complement(1323157..1323249),complement(<1322612..1322962)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-012" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AY116620.1" FT mRNA join(AL391244.11:57760..58053,AL391244.11:58401..58475, FT AL391244.11:58730..58839,AL391244.11:61558..61678, FT AL391244.11:63612..63676,complement(1326146..1326245), FT complement(1325839..1325943),complement(1325610..1325751), FT complement(1323334..1323445),complement(1323157..1323249), FT complement(<1321875..1322962)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-001" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AB041605.1 Em:AY037150.1 FT Em:AY337018.1" FT /note="match: ESTs: Em:BQ109461.1 Em:BU152687.1 FT Em:BX340921.1" FT mRNA join(AL391244.11:57761..58053,AL391244.11:58401..58475, FT AL391244.11:58730..58839,AL391244.11:61558..61678, FT AL391244.11:63612..63676,AL391244.11:64269..64282, FT AL391244.11:65496..65923,complement(1326146..1326528), FT complement(1325839..1325943),complement(1325610..1325751), FT complement(1323334..1323445),complement(1323157..1323249), FT complement(1322088..1322962)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-004" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK056120.1" FT /note="match: ESTs: Em:BM787731.1 Em:BQ897146.1" FT mRNA join(AL391244.11:57763..58053,AL391244.11:58401..58475, FT AL391244.11:58730..58839,AL391244.11:61558..61678, FT AL391244.11:63612..63676,AL391244.11:64269..65923, FT complement(1326146..1326528),complement(1325839..1325943), FT complement(1325610..1325751),complement(1324330..1324427), FT complement(1324006..1324123),complement(1323334..1323445), FT complement(1323157..1323249),complement(1321879..1322962)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-003" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK074112.1" FT CDS join(AL391244.11:57766..58053,AL391244.11:58401..58475, FT AL391244.11:58730..58839,AL391244.11:61558..61678, FT AL391244.11:63612..63676,complement(1326146..1326245), FT complement(1325839..1325943),complement(1325610..1325751), FT complement(1323334..1323445),complement(1323157..1323249), FT complement(1322611..1322962)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-001" FT /standard_name="OTTHUMP00000002948" FT /product="cyclin L2" FT /note="match: proteins: Sw:Q96S94 Sw:Q9JJA7" FT /protein_id="CAM12829.1" FT /translation="MAAAAAAAGAAGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGV FT LITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQV FT LFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPL FT LLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWNY FT MNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICLKIL FT QLYARKKVDLTHLEGEVEKRKHAIEEAKAQARGLLPGGTQVLDGTSGFSPAPKLVESPK FT EGKGSKPSPLSVKNTKRRLEGAKKAKADSPVNGLPKGRESRSRSRSREQSYSRSPSRSA FT SPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKGSEIRGSRKSKDCKYPQKP FT HKSRSRSSSRSRSRSRERADNPGKYKKKSHYYRDQRRERSRSYERTGRRYERDHPGHSR FT HRR" FT mRNA join(AL391244.11:58768..58839,AL391244.11:61535..61678, FT AL391244.11:63612..63676,AL391244.11:64269..64393, FT complement(1326146..1326245),complement(1325839..1325943), FT complement(1325610..1325751),complement(1323334..1323445), FT complement(1323157..1323249),complement(1321862..1322962)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-005" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK057133.1" FT mRNA join(AL391244.11:64356..64393,AL391244.11:65497..65775, FT complement(1326146..1326245),complement(1325839..1325943), FT complement(1325610..1325751),complement(1323403..1323445)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-009" FT /product="cyclin L2" FT /note="match: ESTs: Em:CN402151.1" FT mRNA join(AL391244.11:65318..65923,complement(1326146..1326528), FT complement(1325839..1325943),complement(1325610..1325751), FT complement(1324330..1324427),complement(1323334..1323445), FT complement(1323157..1323249),complement(<1321882..1322962)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-014" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK026796.1" FT /note="match: ESTs: Em:BP358686.1" FT misc_feature complement(1326529..1392451) FT /note="annotated region of clone" FT CDS join(1386064..1386138,1387426..1387502,1387745..1387814, FT 1389725..1389880,1390840..1390899,1391171..1391296, FT 1391605..1391729,AL157945.21:158..209, FT AL157945.21:2190..2260,AL157945.21:3779..3946, FT AL157945.21:5629..5737,AL157945.21:11412..11744) FT /gene="ATAD3C" FT /locus_tag="RP4-628J24.1-001" FT /standard_name="OTTHUMP00000000561" FT /product="ATPase family, AAA domain containing 3C" FT /note="match: proteins: Sw:Q5T9A4 Sw:Q9NVI7 Sw:Q9NVI7 FT Tr:Q96T67" FT /protein_id="CAI22656.1" FT /translation="MSKDALNLAQMQEQTLQLEQQSKLKQLVNEDLRKQEESVQKHHQT FT FLESIRAAGTLFGEGFRAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRYIEARLG FT KPSLVRETSRITVLEALRHPIQQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIMTRNI FT KKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFD FT WANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLILASCHP FT EQFDWAINACIDVMVHFDLPGQEERARLVRMYLNEYVLKPATEGKRRLKLAQFDYGRKC FT LEIARLTEGMSCRKIAQLAVSWQGHGVCLQGRGPDRGHDGRLRARLCPAAPADDALAEG FT GEAWARGRATLILSPWGDHTSRSLAADPSHPCLCGPAHLGNTPRNKVPRGPHRCVYWLT FT RGGVWGPLTSPWGQR" FT mRNA join(1385069..1386138,1387426..1387502,1387745..1387814, FT 1389725..1389880,1390840..1390899,1391171..1391296, FT 1391605..1391729,AL157945.21:158..209, FT AL157945.21:2190..2260,AL157945.21:3779..3946, FT AL157945.21:5629..5737,AL157945.21:11412..12128) FT /gene="ATAD3C" FT /locus_tag="RP4-628J24.1-001" FT /product="ATPase family, AAA domain containing 3C" FT /note="match: cDNAs: Em:AK091918.1 Em:AX747252.1" FT mRNA join(1385381..1385421,1386061..1386138,1387426..1387502, FT 1387745..1387814,1390840..1390899,1391171..1391282) FT /gene="ATAD3C" FT /locus_tag="RP4-628J24.1-003" FT /product="ATPase family, AAA domain containing 3C" FT /note="match: ESTs: Em:BI117722.1" FT polyA_site 1378262 FT polyA_signal 1378235..1378240 FT polyA_site 1376146 FT polyA_signal 1376126..1376131 FT mRNA join(1371051..1371201,1372307..1372864,1374461..1378262) FT /gene="VWA1" FT /locus_tag="RP4-758J18.11-001" FT /product="von Willebrand factor A domain containing 1" FT /note="match: ESTs: Em:AA531220.1 Em:AI821482.1 FT Em:BF568206.1 Em:BG150912.1 Em:BG370349.1 Em:BG830237.1 FT Em:BG831392.1 Em:BI545059.1 Em:BI546662.1 Em:BU949921.1 FT Em:CB994223.1" FT /note="match: cDNAs: Em:AK030019.1 Em:AK075366.1 FT Em:AK077240.1 Em:AL137722.1 Em:AY030094.1 Em:BC003543.1 FT Em:BC026919.1 Em:BC036166.1" FT CDS join(1371129..1371201,1372307..1372864,1374461..1375167) FT /gene="VWA1" FT /locus_tag="RP4-758J18.11-001" FT /standard_name="OTTHUMP00000003018" FT /product="von Willebrand factor A domain containing 1" FT /note="match: proteins: Tr:Q8C0Q7 Tr:Q8R2Z5 Tr:Q923K3" FT /protein_id="CAI22657.1" FT /translation="MLPWTALGLALSLRLALARSGAERGPPASAPRGDLMFLLDSSASV FT SHYEFSRVREFVGQLVAPLPLGTGALRASLVHVGSRPYTEFPFGQHSSGEAAQDAVRAS FT AQRMGDTHTGLALVYAKEQLFAEASGARPGVPKVLVWVTDGGSSDPVGPPMQELKDLGV FT TVFIVSTGRGNFLELSAAASAPAEKHLHFVDVDDLHIIVQELRGSILDAMRPQQLHATE FT ITSSGFRLAWPPLLTADSGYYVLELVPSAQPGAARRQQLPGNATDWIWAGLDPDTDYDV FT ALVPESNVRLLRPQILRVRTRPGEAGPGASGPESGAGPAPTQLAALPAPEEAGPERIVI FT SHARPRSLRVSWAPALGSAAALGYHVQFGPLRGGEAQRVEVPAGRNCTTLQGLAPGTAY FT LVTVTAAFRSGRESALSAKACTPDGPRPRPRPVPRAPTPGTASREP" FT mRNA join(1370903..1371201,1372702..1372864,1374461..1376145) FT /gene="VWA1" FT /locus_tag="RP4-758J18.11-002" FT /product="von Willebrand factor A domain containing 1" FT /note="match: ESTs: Em:BQ100861.1 Em:BQ101163.1" FT /note="match: cDNAs: Em:AK096773.1" FT mRNA join(1371115..1371201,1372187..1372557) FT /gene="VWA1" FT /locus_tag="RP4-758J18.11-004" FT /product="von Willebrand factor A domain containing 1" FT /note="match: ESTs: Em:BU145818.1" FT mRNA join(1370241..1370526,1372307..1372839) FT /gene="VWA1" FT /locus_tag="RP4-758J18.11-003" FT /product="von Willebrand factor A domain containing 1" FT /note="match: ESTs: Em:BI438382.1 Em:BU784826.1 FT Em:BU786565.1" FT mRNA complement(join(1365919..1366042,1369568..1369953)) FT /locus_tag="RP4-758J18.10-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM699504.1" FT mRNA complement(join(1366044..1366334,1369558..1369900)) FT /locus_tag="RP4-758J18.10-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM726062.1" FT mRNA complement(join(1365930..1366042,1369558..1369868)) FT /locus_tag="RP4-758J18.10-004" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI676159.1" FT mRNA complement(join(1365930..1366334,1367185..1367223)) FT /locus_tag="RP4-758J18.10-003" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI203276.1" FT mRNA complement(join(1363502..1364430,1365355..1365635)) FT /locus_tag="RP4-758J18.9-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:BC041939.2" FT polyA_site complement(1363501) FT mRNA complement(join(1360832..1361192,1363098..1363179)) FT /locus_tag="RP4-758J18.8-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI762437.1" FT mRNA join(1361556..1361765,1362934..1363005) FT /locus_tag="RP4-758J18.12-001" FT /product="novel transcript" FT /note="match: ESTs: Em:DN831325.1 Em:DN831326.1" FT mRNA complement(join(1353800..1354929,1356177..1356385, FT 1356513..1357149)) FT /locus_tag="RP4-758J18.6-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BE798505.1 Em:BM925676.1 FT Em:BU170270.1 Em:CD387703.1" FT /note="match: cDNAs: Em:BC018095.1" FT mRNA complement(join(1354518..1354929,1356177..1356640)) FT /locus_tag="RP4-758J18.6-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BE263901.1 Em:BE795877.1 FT Em:BI755193.1" FT mRNA complement(join(1355625..1355972,1356177..1356272)) FT /locus_tag="RP4-758J18.6-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AI522076.1" FT misc_feature complement(1356109) FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 600bp from restriction digest data and FT spanning pUC clone" FT mRNA join(1355625..1355944,1357849..1358071) FT /locus_tag="RP4-758J18.7-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI924181.1" FT mRNA complement(join(1354260..1354929,1355432..1355533)) FT /locus_tag="RP4-758J18.6-004" FT /product="novel transcript" FT /note="match: ESTs: Em:BI553160.1" FT misc_feature complement(1355471) FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 50bp from restriction digest data and FT spanning pUC clones" FT polyA_signal complement(1353816..1353821) FT polyA_site complement(1353800) FT mRNA complement(join(1337288..1337636,1341189..1341266, FT 1342289..1342399,1342511..1342693)) FT /gene="MRPL20" FT /locus_tag="RP4-758J18.4-001" FT /product="mitochondrial ribosomal protein L20" FT /note="match: ESTs: Em:BG680947.1 Em:BG700526.1 FT Em:BM800454.1 Em:BM904754.1 Em:BQ961898.1 Em:BX339901.1" FT /note="match: cDNAs: Em:AB049644.1 Em:BC009515.1 FT Em:BC014316.1" FT mRNA complement(join(1340489..1341266,1342289..1342399, FT 1342511..1342670)) FT /gene="MRPL20" FT /locus_tag="RP4-758J18.4-003" FT /product="mitochondrial ribosomal protein L20" FT /note="match: ESTs: Em:BG435082.1 Em:BM476224.1 FT Em:BM832527.1" FT mRNA complement(join(1337293..1337636,1341189..1342399, FT 1342511..1342648)) FT /gene="MRPL20" FT /locus_tag="RP4-758J18.4-002" FT /product="mitochondrial ribosomal protein L20" FT /note="match: ESTs: Em:AU117087.1 Em:BM547595.1" FT /note="match: cDNAs: Em:AK000886.1" FT mRNA complement(join(1341629..1341726,1342289..1342399, FT 1342511..1342615)) FT /gene="MRPL20" FT /locus_tag="RP4-758J18.4-005" FT /product="mitochondrial ribosomal protein L20" FT /note="match: ESTs: Em:AA318337.1 Em:BE931896.1" FT CDS complement(join(1337463..1337636,1341189..1341266, FT 1342289..1342399,1342511..1342597)) FT /gene="MRPL20" FT /locus_tag="RP4-758J18.4-001" FT /standard_name="OTTHUMP00000002947" FT /product="mitochondrial ribosomal protein L20" FT /note="match: proteins: Sw:Q9BYC9 Sw:Q9CQL4 Tr:Q91YJ4" FT /protein_id="CAI22658.1" FT /translation="MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRT FT VIRAFVKCTKARYLKKKNMRTLWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLAD FT LAIYEPKTFKSLAALASRRRHEGFAAALGDGKEPEGIFSRVVQYH" FT mRNA complement(join(1337562..1337981,1341189..1341266, FT 1342289..1342378)) FT /gene="MRPL20" FT /locus_tag="RP4-758J18.4-004" FT /product="mitochondrial ribosomal protein L20" FT /note="match: ESTs: Em:BM818788.1 Em:BM818930.1 FT Em:BM823502.1" FT mRNA complement(join(1337293..1337636,1341189..1341266, FT 1341606..1341687)) FT /gene="MRPL20" FT /locus_tag="RP4-758J18.4-006" FT /product="mitochondrial ribosomal protein L20" FT /note="match: ESTs: Em:BX378716.1 Em:BX378717.1" FT mRNA complement(join(1337454..1338076,1338877..1339205)) FT /locus_tag="RP4-758J18.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL527638.2" FT polyA_site 1337426 FT polyA_signal 1337402..1337407 FT polyA_signal 1337390..1337395 FT polyA_site complement(1337293) FT polyA_site complement(1337289) FT mRNA join(1335799..1335852,1336623..1337426) FT /locus_tag="RP4-758J18.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF684636.1 Em:BF684642.1" FT mRNA join(1334910..1335683,1335985..1336359) FT /locus_tag="RP4-758J18.2-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AL517572.2 Em:AL543994.2 FT Em:BM544771.1" FT mRNA join(1334902..1335069,1335538..1335683,1335985..1336467) FT /locus_tag="RP4-758J18.2-004" FT /product="novel transcript" FT /note="match: ESTs: Em:BI911209.1" FT mRNA join(1334907..1335065,1335538..1335683,1335985..1337426) FT /locus_tag="RP4-758J18.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL533370.2 Em:AU143273.1 FT Em:BI522617.1 Em:BI758740.1 Em:BX462871.1 Em:CA310627.1" FT /note="match: cDNAs: Em:AK024040.1" FT mRNA join(1334902..1335061,1335530..1335675,1335977..1336805) FT /locus_tag="RP4-758J18.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AL525242.2 Em:AL527639.2 FT Em:BI257793.1 Em:BI911209.1" FT mRNA complement(join(CR628411.1:<4458..4808, FT CR628411.1:5003..5095,CR628411.1:5180..5291, FT CR628411.1:7456..7597,CR628411.1:7685..7789, FT CR628411.1:7992..8091,1328170..1328183,1328776..1328840, FT 1330774..1330894,1333613..1333722,1333977..1334051, FT 1334399..1334708)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-012" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AY116620.1" FT mRNA complement(join(1327668..1328183,1328776..1328840, FT 1330774..1330894,1333613..1333722,1333977..1334051, FT 1334399..1334697)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-002" FT /product="cyclin L2" FT /note="match: cDNAs: Em:BC016333.1" FT mRNA complement(join(CR628411.1:<3721..4808, FT CR628411.1:5003..5095,CR628411.1:5180..5291, FT CR628411.1:7456..7597,CR628411.1:7685..7789, FT CR628411.1:7992..8091,1328776..1328840,1330774..1330894, FT 1333613..1333722,1333977..1334051,1334399..1334692)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-001" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AB041605.1 Em:AY037150.1 FT Em:AY337018.1" FT /note="match: ESTs: Em:BQ109461.1 Em:BU152687.1 FT Em:BX340921.1" FT mRNA complement(join(CR628411.1:3934..4808, FT CR628411.1:5003..5095,CR628411.1:5180..5291, FT CR628411.1:7456..7597,CR628411.1:7685..7789, FT CR628411.1:7992..8374,1326529..1326956,1328170..1328183, FT 1328776..1328840,1330774..1330894,1333613..1333722, FT 1333977..1334051,1334399..1334691)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-004" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK056120.1" FT /note="match: ESTs: Em:BM787731.1 Em:BQ897146.1" FT mRNA complement(join(CR628411.1:3725..4808, FT CR628411.1:5003..5095,CR628411.1:5180..5291, FT CR628411.1:5852..5969,CR628411.1:6176..6273, FT CR628411.1:7456..7597,CR628411.1:7685..7789, FT CR628411.1:7992..8374,1326529..1328183,1328776..1328840, FT 1330774..1330894,1333613..1333722,1333977..1334051, FT 1334399..1334689)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-003" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK074112.1" FT CDS complement(join(CR628411.1:4457..4808, FT CR628411.1:5003..5095,CR628411.1:5180..5291, FT CR628411.1:7456..7597,CR628411.1:7685..7789, FT CR628411.1:7992..8091,1328776..1328840,1330774..1330894, FT 1333613..1333722,1333977..1334051,1334399..1334686)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-001" FT /standard_name="OTTHUMP00000002948" FT /product="cyclin L2" FT /note="match: proteins: Sw:Q96S94 Sw:Q9JJA7" FT /protein_id="CAI22660.2" FT /translation="MAAAAAAAGAAGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGV FT LITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQV FT LFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPL FT LLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWNY FT MNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICLKIL FT QLYARKKVDLTHLEGEVEKRKHAIEEAKAQARGLLPGGTQVLDGTSGFSPAPKLVESPK FT EGKGSKPSPLSVKNTKRRLEGAKKAKADSPVNGLPKGRESRSRSRSREQSYSRSPSRSA FT SPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKGSEIRGSRKSKDCKYPQKP FT HKSRSRSSSRSRSRSRERADNPGKYKKKSHYYRDQRRERSRSYERTGRRYERDHPGHSR FT HRR" FT CDS complement(join(1328162..1328183,1328776..1328840, FT 1330774..1330894,1333613..1333722,1333977..1334051, FT 1334399..1334686)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-002" FT /standard_name="OTTHUMP00000002949" FT /product="cyclin L2" FT /note="match: proteins: Sw:Q96S94" FT /protein_id="CAI22659.1" FT /translation="MAAAAAAAGAAGSAAPAAAAGAPGSGGAPSGSQGVLIGDRLYSGV FT LITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQV FT LFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPL FT LLDQDYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWVA FT SEGK" FT mRNA complement(join(1330817..1330894,1333613..1333722, FT 1333977..1334336)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-011" FT /product="cyclin L2" FT /note="match: ESTs: Em:AW663919.1" FT mRNA complement(join(1326533..1326933,1328059..1328183, FT 1328776..1328840,1330774..1330894,1333613..1333746)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-010" FT /product="cyclin L2" FT /note="match: ESTs: Em:AV647627.1 Em:AV647780.1 FT Em:AW582355.1" FT mRNA complement(join(CR628411.1:3708..4808, FT CR628411.1:5003..5095,CR628411.1:5180..5291, FT CR628411.1:7456..7597,CR628411.1:7685..7789, FT CR628411.1:7992..8091,1328059..1328183,1328776..1328840, FT 1330774..1330917,1333613..1333684)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-005" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK057133.1" FT mRNA complement(join(1330565..1330894,1333613..1333667)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-006" FT /product="cyclin L2" FT /note="match: ESTs: Em:BI063592.1" FT mRNA complement(join(1328460..1328840,1330774..1330894, FT 1333613..1333667)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-007" FT /product="cyclin L2" FT /note="match: ESTs: Em:BI063254.1 Em:BI063348.1" FT mRNA complement(join(CR628411.1:5249..5291, FT CR628411.1:7456..7597,CR628411.1:7685..7789, FT CR628411.1:7992..8091,1326677..1326955,1328059..1328096)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-009" FT /product="cyclin L2" FT /note="match: ESTs: Em:CN402151.1" FT polyA_signal complement(1327685..1327690) FT polyA_site complement(1327668) FT mRNA complement(join(CR628411.1:<3728..4808, FT CR628411.1:5003..5095,CR628411.1:5180..5291, FT CR628411.1:6176..6273,CR628411.1:7456..7597, FT CR628411.1:7685..7789,CR628411.1:7992..8374, FT 1326529..1327134)) FT /gene="CCNL2" FT /locus_tag="RP4-758J18.1-014" FT /product="cyclin L2" FT /note="match: cDNAs: Em:AK026796.1" FT /note="match: ESTs: Em:BP358686.1" FT misc_feature complement(1326628) FT /note="Clone_right_end: RP4-628J24" FT misc_feature 1392452..1431445 FT /note="annotated region of clone" FT mRNA join(<1397876..1398088,1403764..1403986) FT /gene="ATAD3C" FT /locus_tag="RP4-628J24.1-004" FT /product="ATPase family, AAA domain containing 3C" FT /note="match: ESTs: Em:BM310993.1" FT mRNA join(1398047..1398088,1403764..1405538) FT /gene="ATAD3C" FT /locus_tag="RP4-628J24.1-002" FT /product="ATPase family, AAA domain containing 3C" FT /note="match: cDNAs: Em:AK094502.1" FT CDS join(complement(AL391244.11:6314..6388), FT complement(AL391244.11:4950..5026), FT complement(AL391244.11:4638..4707), FT complement(AL391244.11:2572..2727), FT complement(AL391244.11:1553..1612), FT complement(AL391244.11:1156..1281), FT complement(AL391244.11:723..847),1392509..1392560, FT 1394541..1394611,1396130..1396297,1397980..1398088, FT 1403763..1404095) FT /gene="ATAD3C" FT /locus_tag="RP4-628J24.1-001" FT /standard_name="OTTHUMP00000000561" FT /product="ATPase family, AAA domain containing 3C" FT /note="match: proteins: Sw:Q5T9A4 Sw:Q9NVI7 Sw:Q9NVI7 FT Tr:Q96T67" FT /protein_id="CAI22067.1" FT /translation="MSKDALNLAQMQEQTLQLEQQSKLKQLVNEDLRKQEESVQKHHQT FT FLESIRAAGTLFGEGFRAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRYIEARLG FT KPSLVRETSRITVLEALRHPIQQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIMTRNI FT KKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFD FT WANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLILASCHP FT EQFDWAINACIDVMVHFDLPGQEERARLVRMYLNEYVLKPATEGKRRLKLAQFDYGRKC FT LEIARLTEGMSCRKIAQLAVSWQGHGVCLQGRGPDRGHDGRLRARLCPAAPADDALAEG FT GEAWARGRATLILSPWGDHTSRSLAADPSHPCLCGPAHLGNTPRNKVPRGPHRCVYWLT FT RGGVWGPLTSPWGQR" FT mRNA join(complement(AL391244.11:6314..7383), FT complement(AL391244.11:4950..5026), FT complement(AL391244.11:4638..4707), FT complement(AL391244.11:2572..2727), FT complement(AL391244.11:1553..1612), FT complement(AL391244.11:1156..1281), FT complement(AL391244.11:723..847),1392509..1392560, FT 1394541..1394611,1396130..1396297,1397980..1398088, FT 1403763..1404479) FT /gene="ATAD3C" FT /locus_tag="RP4-628J24.1-001" FT /product="ATPase family, AAA domain containing 3C" FT /note="match: cDNAs: Em:AK091918.1 Em:AX747252.1" FT mRNA join(1407149..1407469,1412654..1412730,1414024..1414125, FT 1414429..1414488,1416247..1416316,1417518..1417683, FT 1417925..1417994,1420396..1420551,1421162..1421218, FT 1421490..1421615,1421924..1422048,1423243..1423294, FT 1424584..1424654,1425637..1425804,1425943..1426051, FT 1430865..1431445,complement(AL645728.31:84969..85105)) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-001" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:BC014101.1 Em:BC014101.2" FT CDS join(1407265..1407469,1412654..1412730,1414024..1414125, FT 1414429..1414488,1416247..1416316,1417518..1417683, FT 1417925..1417994,1420396..1420551,1421162..1421218, FT 1421490..1421615,1421924..1422048,1423243..1423294, FT 1424584..1424654,1425637..1425804,1425943..1426051, FT 1430865..1431197) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-001" FT /standard_name="OTTHUMP00000000600" FT /product="ATPase family, AAA domain containing 3B" FT /protein_id="CAI22068.1" FT /translation="MSWLFGVNKGPKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPKD FT KWSNFDPTGLERAAKAARELEHSRYAKEALNLAQMQEQTLQLEQQSKLKEYEAAVEQLK FT SEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESV FT QKQEAMRRATVEREMELRHKNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTV FT LESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGK FT PSLVRETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKK FT NRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWA FT NTSRRGLLLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQ FT FDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSE FT VARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEG FT PGRGVEHPLSGVQGETLTSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCG FT GGRPFCPPGHPLL" FT mRNA join(1413406..1414125,1414429..1414488,1416247..1416316, FT 1417518..1417683,1417925..1417994,1420396..1420551, FT 1421162..1421218,1421490..1421615,1421924..1422048, FT 1423243..1423294,1425637..1425804,1425943..1426051, FT 1430865..1431445,complement(AL645728.31:83323..85105)) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-002" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:AB033099.1" FT mRNA join(1414429..1414488,1416247..1416316,1417518..1417683, FT 1417925..1418042,1418430..1418525) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-005" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: ESTs: Em:AW071800.1" FT CDS join(1416307..1416316,1417518..1417683,1417925..1418042, FT 1418430..1418486) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-005" FT /standard_name="OTTHUMP00000039106" FT /product="ATPase family, AAA domain containing 3B" FT /protein_id="CAI22070.1" FT /translation="MRRATVEREMELRHKNEMLRVETEARARAKAERENADIIREQIRL FT KASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVNIFIKQGWQVAERQHFRRRRW FT ADHEVRRSRSSW" FT mRNA join(1418865..1420551,1421162..1421218,1421490..1421615, FT 1421924..1422048,1423243..1423294,1424584..1424654, FT 1425072..1425191,1425637..1425804,1425943..1426051, FT 1430865..1431445,complement(AL645728.31:84969..85105)) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-003" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:AK127857.1" FT mRNA join(1419949..1420551,1421162..1421615,1421924..1422048, FT 1424584..1426051,1430865..1431445, FT complement(AL645728.31:84970..85105)) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-004" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:AL834179.1" FT misc_feature 1427999 FT /note="Clone_right_end: RP4-758J18" FT misc_feature 1429346 FT /note="Clone_left_end: RP5-832C2" FT misc_feature complement(1431446..1516550) FT /note="annotated region of clone" FT mRNA complement(join(1477053..1477547,1479249..1479367, FT 1480243..1480382,1500153..1500296,1509858..1510249)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-001" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /note="match: cDNAs: Em:AF161530.1 Em:AJ276409.1 FT Em:AK001809.1 Em:BC008070.1 Em:BC008070.2 Em:BC018909.1 FT Em:BC018909.2" FT mRNA complement(join(1480018..1480382,1500153..1500296, FT 1509858..1509967)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-004" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /note="match: ESTs: Em:BX472490.1" FT mRNA complement(join(1497732..1500296,1509858..1509964)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-003" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /note="match: cDNAs: Em:AK023110.1" FT CDS complement(join(1499915..1500296,1509858..1509937)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-003" FT /standard_name="OTTHUMP00000000599" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /note="match: proteins: Tr:Q9H933" FT /protein_id="CAI22945.1" FT /translation="MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLP FT GPAPDKPNVYDFKTTYDQMYNDLLRKDKELYPSGLPFKNPPCGPPWKVLRVARAQEACH FT PVQCTHWLLCLCESLVSIPGARRIVHGLVPVPPMAVGVVRRTDTVWGSP" FT CDS complement(join(1480118..1480382,1500153..1500296, FT 1509858..1509937)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-004" FT /standard_name="OTTHUMP00000039178" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /protein_id="CAI22946.1" FT /translation="MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLP FT GPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDL FT FDLILTCEERVYDQVVEGEEAAACWAGLQQLSQGLGMPAGPHHDQYSPSRVAGAGEQT" FT CDS complement(join(1477446..1477547,1479249..1479367, FT 1480243..1480382,1500153..1500296,1509858..1509937)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-001" FT /standard_name="OTTHUMP00000000597" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /note="match: proteins: Tr:Q91YL1 Tr:Q9BZS6 Tr:Q9CY97 FT Tr:Q9DB51 Tr:Q9NP77" FT /protein_id="CAI22947.1" FT /translation="MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLP FT GPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDL FT FDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQ FT HTEDMENEIDELLQEFEEKSGRTFLHTVCFY" FT mRNA join(AL157945.21:14798..15118,AL157945.21:20303..20379, FT AL157945.21:21673..21774,AL157945.21:22078..22137, FT AL157945.21:23896..23965,AL157945.21:25167..25332, FT AL157945.21:25574..25643,AL157945.21:28045..28200, FT AL157945.21:28811..28867,AL157945.21:29139..29264, FT AL157945.21:29573..29697,AL157945.21:30892..30943, FT AL157945.21:32233..32303,AL157945.21:33286..33453, FT AL157945.21:33592..33700,AL157945.21:38514..39094, FT 1431446..1431582) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-001" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:BC014101.1 Em:BC014101.2" FT polyA_signal complement(1497744..1497749) FT polyA_site complement(1497725) FT mRNA join(AL157945.21:21055..21774,AL157945.21:22078..22137, FT AL157945.21:23896..23965,AL157945.21:25167..25332, FT AL157945.21:25574..25643,AL157945.21:28045..28200, FT AL157945.21:28811..28867,AL157945.21:29139..29264, FT AL157945.21:29573..29697,AL157945.21:30892..30943, FT AL157945.21:33286..33453,AL157945.21:33592..33700, FT AL157945.21:38514..39094,1431446..1433228) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-002" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:AB033099.1" FT mRNA join(AL157945.21:26514..28200,AL157945.21:28811..28867, FT AL157945.21:29139..29264,AL157945.21:29573..29697, FT AL157945.21:30892..30943,AL157945.21:32233..32303, FT AL157945.21:32721..32840,AL157945.21:33286..33453, FT AL157945.21:33592..33700,AL157945.21:38514..39094, FT 1431446..1431582) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-003" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:AK127857.1" FT mRNA join(AL157945.21:27598..28200,AL157945.21:28811..29264, FT AL157945.21:29573..29697,AL157945.21:32233..33700, FT AL157945.21:38514..39094,1431446..1431581) FT /gene="ATAD3B" FT /locus_tag="RP4-628J24.3-004" FT /product="ATPase family, AAA domain containing 3B" FT /note="match: cDNAs: Em:AL834179.1" FT mRNA complement(join(1477054..1477547,1479249..1479367, FT 1480243..1481867)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-002" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /note="match: cDNAs: Em:AK127149.1" FT misc_feature complement(1480681..1480755) FT /note="Sequence from overlapping clone RP4-628J24 FT (AL157945). Assembly confirmed by restriction digest" FT CDS complement(join(1477446..1477547,1479249..1479367, FT 1480243..1480357)) FT /gene="SSU72" FT /locus_tag="RP5-832C2.2-002" FT /standard_name="OTTHUMP00000000598" FT /product="SSU72 RNA polymerase II CTD phosphatase homolog FT (S. cerevisiae)" FT /protein_id="CAI22948.1" FT /translation="MLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDLNSREQ FT ETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFEEKSGRTF FT LHTVCFY" FT misc_feature complement(1477742..1477852) FT /note="Sequence from overlapping clone RP4-628J24 FT (AL157945). Assembly confirmed by restriction digest" FT misc_feature complement(1477469..1477571) FT /note="Sequence from overlapping clone RP11-197P23 FT (AL713970). Assembly confirmed by restriction digest" FT misc_feature complement(1475968..1476035) FT /note="Sequence from overlapping clone RP11-197P23 FT (AL713970). Assembly confirmed by restriction digest" FT CDS complement(join(1470566..1470887,1470969..1471177, FT 1475064..1475170,1475670..>1475718)) FT /codon_start=1 FT /gene="C1orf70" FT /locus_tag="RP5-832C2.4-001" FT /standard_name="OTTHUMP00000039180" FT /product="chromosome 1 open reading frame 70" FT /protein_id="CAI22949.1" FT /translation="EREHHDLHDSGGVGRDGHRVLDGHERAAGPIPQLHPPAPAGRGPR FT LPLQLWPAPYPLRDPVRRGPVGGGRLRELLCDGQCDQAGDRPHAGAAAGLLHQLVPGVD FT GRRPALRRARLESRTALRWLVDLAAQAVQPAGAGPAAAQALRGGRREHGTREAETLPQW FT PPQPAAPVSRTGTYRGHRANRLLYRCKRDLVDARAGGTGQQPWAQVVRGCGRPGESSGR FT CCLFFL" FT mRNA complement(join(1470554..1470887,1470969..1471177, FT 1475064..1475170,1475670..>1475718)) FT /gene="C1orf70" FT /locus_tag="RP5-832C2.4-001" FT /product="chromosome 1 open reading frame 70" FT /note="match: ESTs: Em:BU929336.1" FT misc_feature complement(1472232..1472390) FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT polyA_site 1470065 FT polyA_signal 1470043..1470048 FT mRNA join(<1459653..1459777,1460620..1460671,1461841..1461911, FT 1462541..1462618,1463075..1463242,1464603..>1464711) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-006" FT /product="ATPase family, AAA domain containing 3A" FT /note="match: ESTs: Em:BQ673631.1" FT CDS join(<1459653..1459777,1460620..1460671,1461841..1461911, FT 1462541..1462618,1463075..1463242,1464603..>1464711) FT /codon_start=1 FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-006" FT /standard_name="OTTHUMP00000039177" FT /product="ATPase family, AAA domain containing 3A" FT /protein_id="CAI22950.1" FT /translation="KLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLL FT FVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNNPSHVSHGGSSPAGRPWLTPQA FT RWAPRFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEG FT KQRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQ" FT mRNA join(1453001..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..>1458160) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-005" FT /product="ATPase family, AAA domain containing 3A" FT /note="match: ESTs: Em:BM789054.1" FT CDS join(1453066..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..>1458160) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-005" FT /standard_name="OTTHUMP00000039110" FT /product="ATPase family, AAA domain containing 3A" FT /protein_id="CAI22951.1" FT /translation="MCLCRPLLPQRAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESV FT QKQEAMRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTV FT LESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVGVY" FT mRNA join(1452450..1452792,1453096..>1453155) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-004" FT /product="ATPase family, AAA domain containing 3A" FT /note="match: ESTs: Em:BM792916.1" FT CDS join(1452547..1452792,1453096..>1453155) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-004" FT /standard_name="OTTHUMP00000039109" FT /product="ATPase family, AAA domain containing 3A" FT /protein_id="CAI22952.1" FT /translation="MRLEALSLLHTLVWAWSLCRAGAVQTQERLSGSASPEQVPAGECC FT ALQEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQ" FT mRNA join(<1447910..1448070,1451392..1451468,1452691..1452792, FT 1453096..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..1458279,1458891..1458947, FT 1459219..1459344,1459653..1459777,1460620..1460671, FT 1461841..1461911,1463075..1463242,1464603..1464711, FT 1469306..1470065) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-002" FT /product="ATPase family, AAA domain containing 3A" FT /note="match: cDNAs: Em:AK056099.1" FT CDS join(<1447910..1448070,1451392..1451468,1452691..1452792, FT 1453096..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..1458279,1458891..1458947, FT 1459219..1459344,1459653..1459777,1460620..1460671, FT 1461841..1461911,1463075..1463242,1464603..1464711, FT 1469306..1469452) FT /codon_start=2 FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-002" FT /standard_name="OTTHUMP00000000595" FT /product="ATPase family, AAA domain containing 3A" FT /protein_id="CAI22953.1" FT /translation="GALALAAPRRCRQPLPGRDCAPGAPPAGAVSRAGRIGLFPSPVCT FT SAAVRSGSGYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTL FT SEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREM FT ELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGF FT RAFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETSRITVLEA FT LRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPG FT TGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEAD FT AFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINEMVHF FT DLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVARLTEGMSGREIAQ FT LAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPGRGDEPSPS" FT mRNA join(1447531..1447853,1451392..1451468,1452691..1452792, FT 1453096..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..1458279,1458891..1458947, FT 1459219..1459344,1459653..1459777,1460620..1460671, FT 1461841..1461911,1463075..1463242,1464603..1464711, FT 1469306..1470065) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-001" FT /product="ATPase family, AAA domain containing 3A" FT /note="match: cDNAs: Em:BC007803.1 Em:BC007803.2 FT Em:BC014101.1 Em:BC014101.2" FT CDS join(1447649..1447853,1451392..1451468,1452691..1452792, FT 1453096..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..1458279,1458891..1458947, FT 1459219..1459344,1459653..1459777,1460620..1460671, FT 1461841..1461911,1463075..1463242,1464603..1464711, FT 1469306..1469452) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-001" FT /standard_name="OTTHUMP00000000594" FT /product="ATPase family, AAA domain containing 3A" FT /protein_id="CAI22955.1" FT /translation="MSWLFGINKGPKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPKD FT KWSNFDPTGLERAAKAARELEHSRYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQLK FT SEQIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESV FT QKQEAMRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTV FT LESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGK FT PSLVRETSRITVLEALRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKK FT NRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWA FT NTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQ FT FDWAINDRINEMVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSE FT VARLTEGMSGREIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEG FT PGRGDEPSPS" FT mRNA join(1447555..1447853,1451392..1451468,1452547..1452792, FT 1453096..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..1458279,1458891..1458947, FT 1459219..1459344,1459653..1459777,1460620..1460671, FT 1461841..1461911,1463075..1463242,1464603..1464711, FT 1469306..1470065) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-003" FT /product="ATPase family, AAA domain containing 3A" FT /note="match: cDNAs: Em:AK091144.1 Em:AX746805.1" FT CDS join(1447649..1447853,1451392..1451468,1452547..1452792, FT 1453096..1453155,1454301..1454370,1455521..1455686, FT 1455928..1455997,1458124..1458279,1458891..1458947, FT 1459219..1459344,1459653..1459777,1460620..1460671, FT 1461841..1461911,1463075..1463242,1464603..1464711, FT 1469306..1469452) FT /gene="ATAD3A" FT /locus_tag="RP5-832C2.1-003" FT /standard_name="OTTHUMP00000000596" FT /product="ATPase family, AAA domain containing 3A" FT /protein_id="CAI22954.1" FT /translation="MSWLFGINKGPKGEGAGPPPPLPPAQPGAEGGGDRGLGDRPAPKD FT KWSNFDPTGLERAAKAARELEHSRYAKDALNLAQMQEQTLQLEQQSKLKMRLEALSLLH FT TLVWAWSLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEER FT RKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATV FT EREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLF FT GEGFRAFVTDWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETSRIT FT VLEALRHPIQVSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNILMY FT GPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFV FT DEADAFLRKRATEKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINE FT MVHFDLPGQEERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVARLTEGMSGR FT EIAQLAVSWQATAYASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPGRGDEPSPS" FT misc_feature complement(1446397) FT /note="Clone_left_end: RP4-628J24" FT misc_feature complement(1440173..1440591) FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature complement(1436464) FT /note="Clone_right_end: RP11-345P4" FT polyA_site 1431582 FT polyA_signal 1431560..1431565 FT misc_feature complement(1431446) FT /note="Clone_left_end: RP5-832C2" FT misc_feature 1619656..1730263 FT /note="annotated region of clone" FT mRNA complement(join(AL691432.53:78390..82908, FT AL691432.53:85216..85361,AL691432.53:86553..86625, FT AL691432.53:86987..87040,AL691432.53:88398..88518, FT AL691432.53:92352..92479,AL691432.53:92953..93088, FT AL691432.53:93267..93735,1623888..1624167)) FT /locus_tag="RP11-345P4.4-001" FT /product="novel protein similar to solute carrier family FT 35, member E2 (SLC35E2)" FT /note="match: cDNAs: Em:AB007916.2 Em:AK125619.1" FT /note="match: ESTs: Em:AL516197.3 Em:AL582895.3 FT Em:BG036927.1 Em:BI601516.1 Em:BX349268.2 Em:CN277331.1 FT Em:CN277339.1" FT mRNA complement(join(AL691432.53:78389..82908, FT AL691432.53:85216..85361,AL691432.53:86553..86625, FT AL691432.53:86987..87040,AL691432.53:88398..88518, FT AL691432.53:92352..92479,AL691432.53:92953..93088, FT AL691432.53:93267..93735,1622415..1622832, FT 1623888..1624083)) FT /locus_tag="RP11-345P4.4-003" FT /product="novel protein similar to solute carrier family FT 35, member E2 (SLC35E2)" FT /note="match: cDNAs: Em:CR936618.1" FT /note="match: ESTs: Em:BG328537.1" FT mRNA complement(join(AL691432.53:87314..88518, FT AL691432.53:92352..92479,AL691432.53:92953..93088, FT AL691432.53:93267..93735,1623888..1624148)) FT /locus_tag="RP11-345P4.4-004" FT /product="novel protein similar to solute carrier family FT 35, member E2 (SLC35E2)" FT /note="match: cDNAs: Em:BC092507.1" FT CDS join(1631381..1631511,1631579..1631718,1631786..1631953, FT 1632346..1632510,1632587..1632697,1632800..1632926, FT 1633047..1633221) FT /pseudo FT /locus_tag="RP1-283E3.1-001" FT /product="matrix metallopeptidase 23B pseudogene" FT /note="match: proteins: Tr:O75894 Tr:O75895 Tr:O75900 FT Tr:O88272 Tr:O88676 Tr:Q9UBR9" FT mRNA complement(join(1634527..1635379,1635478..1635555)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-020" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:BX457373.1" FT mRNA complement(join(1634205..1634438,1634519..1634708, FT 1634915..1635379,1635478..1635585,1635662..1635692)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-021" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:AL536313.2" FT mRNA complement(join(1634527..1634708,1634915..1635063, FT 1635263..1635434,1635662..1635994)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-022" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:BG910581.1" FT mRNA complement(join(1635043..1635063,1635263..1635379, FT 1635478..1635585,1635662..1636041)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-019" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:AV726822.1" FT mRNA complement(join(1635307..1635434,1635662..1635783, FT 1635989..1636024)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-023" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:AW956737.1" FT mRNA complement(join(<1635538..1635585,1635662..1635783, FT 1635989..1636199)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-025" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:BQ377074.1" FT mRNA complement(join(1635682..1635783,1635989..1636463)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-018" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:AL602967.1" FT mRNA complement(join(1635488..1635585,1635662..1636094, FT 1636343..1636464,1637081..1637171,1638848..1639000)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-024" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:BQ899217.1" FT mRNA complement(join(1636047..1636464,1637081..1637171, FT 1638848..1639038,1639619..1639670)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-017" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:BI753229.1" FT mRNA complement(join(1635789..1636464,1637081..1637171, FT 1638964..1639023,1639619..1639684,1640233..1640315)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-016" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:AL536314.2" FT mRNA complement(join(1720500..1720708,1721834..1722035, FT 1724684..1724750,AL109917.22:7595..7757, FT AL109917.22:9651..9714,AL109917.22:18932..19038, FT AL109917.22:20863..21562)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-002" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: cDNAs: Em:AB070162.1" FT CDS complement(join(1718770..1718876,1720492..1720708, FT 1721834..1722035,1724684..1724750,AL109917.22:7595..7757, FT AL109917.22:9651..9714,AL109917.22:18932..19038, FT AL109917.22:21013..21051,AL109917.22:28573..28629)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-001" FT /standard_name="OTTHUMP00000001107" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: proteins: Sw:P17343 Sw:P54311 Sw:P62874 FT Sw:P79959 Tr:P62873 Tr:Q803H5 Tr:Q805B3 Tr:Q9DFH0" FT /protein_id="CAI20029.1" FT /translation="MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQM FT RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA FT YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD FT TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF FT TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS FT GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN FT " FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635011,1643770..1643839,1647785..1647917, FT 1650767..1650869)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-006" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067524.1" FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635783, FT 1635989..1636094,1636343..1636464,1637081..1637171, FT 1638848..1639023,1639619..1639684,1640233..1640391, FT 1640477..1640572,1640957..1641079,1643703..1643866, FT 1647785..1647917,1650797..1650894,1653035..1653094)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-010" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067525.1" FT mRNA complement(join(1650605..1650894,1653035..1653318)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-014" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:AW605339.1" FT CDS complement(join(1634346..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650767..1650894, FT 1653035..1653150,1654027..1654035)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-008" FT /standard_name="OTTHUMP00000000767" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /protein_id="CAI20030.1" FT /translation="MSQSDDRDSKRDSLEEGELRDHCMEITIRNSPYRREDSMEDRGEE FT DDSLAIKPPQQMSRKEKVHHRKDEKRKEKCRHHSHSAEGGKHARVKEREHERRKRHREE FT QDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAE FT ERRKEREARREVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKME FT ERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEE FT EEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEE FT EVGEGTPQSSALTEGDYVPDSPALLPIELKQELPKYLPALQGCRSVEEFQCLNRIEEGT FT YGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGS FT NMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTS FT NLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVG FT CIFGELLTQKPLFPGNSEIDQINKVFKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNL FT RKRFGALLSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPAKSE FT QQRVKRGTSPRPPEGGLGYSQLGDDDLKETGFHLTTTNQGASAAGPGFSLKF" FT CDS complement(join(1634346..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650767..1650894, FT 1653035..1653150,1654147..1654257)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-001" FT /standard_name="OTTHUMP00000000760" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: proteins: Sw:Q9UQ88" FT /protein_id="CAI20034.1" FT /translation="MGDEKDSWKVKTLDEILQEKKRRKEQEEKAEIKRLKNSDDRDSKR FT DSLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEK FT RKEKCRHHSHSAEGGKHARVKEREHERRKRHREEQDKARREWERQKRREMAREHSRRER FT DRLEQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSD FT KVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSS FT AESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEE FT EMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALL FT PIELKQELPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK FT EKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQ FT PFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPL FT KAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKV FT FKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGALLSDQGFDLMNKFLTYFPG FT RRISAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQRVKRGTSPRPPEGGLGYSQLGDD FT DLKETGFHLTTTNQGASAAGPGFSLKF" FT CDS complement(join(1634346..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643866,1647785..1647917,1650797..1650894, FT 1653035..1653150,1654147..1654257)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-003" FT /standard_name="OTTHUMP00000000762" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /protein_id="CAI20031.1" FT /translation="MGDEKDSWKVKTLDEILQEKKRRKEQEEKAEIKRLKNSDDRDSKR FT DSLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEK FT RKEKWKHARVKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERGNDGVCLFRD FT RLEQLERKRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDK FT VKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSA FT ESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEE FT MSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALLP FT IELKQELPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE FT KEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQP FT FLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLK FT AYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKVF FT KELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGALLSDQGFDLMNKFLTYFPGR FT RISAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQRVKRGTSPRPPEGGLGYSQLGDDD FT LKETGFHLTTTNQGASAAGPGFSLKF" FT CDS complement(join(1634346..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650797..1650894, FT 1653035..1653150,1654147..1654257)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-004" FT /standard_name="OTTHUMP00000000763" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /protein_id="CAI20033.1" FT /translation="MGDEKDSWKVKTLDEILQEKKRRKEQEEKAEIKRLKNSDDRDSKR FT DSLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEK FT RKEKWKHARVKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKR FT ERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHWSRS FT PPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEE FT EEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEEREN FT ENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSPALLPIELKQELPK FT YLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSL FT REINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTL FT MIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTQ FT WYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKVFKELGTPSEK FT IWPGYSELPVVKKMTFSEHPYNNLRKRFGALLSDQGFDLMNKFLTYFPGRRISAEDGLK FT HEYFRETPLPIDPSMFPTWPAKSEQQRVKRGTSPRPPEGGLGYSQLGDDDLKETGFHLT FT TTNQGASAAGPGFSLKF" FT CDS complement(join(1634346..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640918..1641079, FT 1643703..1643839,1647785..1647917,1650797..1650894, FT 1653035..1653150,1654147..1654257)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-005" FT /standard_name="OTTHUMP00000000764" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /protein_id="CAI20032.1" FT /translation="MGDEKDSWKVKTLDEILQEKKRRKEQEEKAEIKRLKNSDDRDSKR FT DSLEEGELRDHCMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEK FT RKEKWKHARVKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKR FT ERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHWSRS FT PPRPPRERFELGDGRKPGEARPAPAQKPAQLKEEKMEERDLLSDLQDISDSERKTSSAE FT SSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSAEEV FT SEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPDSP FT ALLPIELKQELPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLK FT MEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMET FT MKQPFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYG FT SPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQI FT NKVFKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGALLSDQGFDLMNKFLTY FT FPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQRVKRGTSPRPPEGGLGYSQL FT GDDDLKETGFHLTTTNQGASAAGPGFSLKF" FT CDS complement(<1654147..1654257) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-011" FT /standard_name="OTTHUMP00000000887" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /protein_id="CAI20035.1" FT /translation="MGDEKDSWKVKTLDEILQEKKRRKEQEEKAEIKRLKN" FT mRNA complement(join(1647789..1647917,1650797..1650894, FT 1653035..1653150,1654147..1654270,1655239..1655471)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-007" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067529.1" FT mRNA complement(join(<1654147..1654270,1655388..1655713)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-011" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:BU164421.1" FT mRNA complement(join(1653905..1654270,1655388..1655458)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-013" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:BF939136.1" FT mRNA complement(join(1634169..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650767..1650894, FT 1653035..1653150,1654027..1654270,1655680..1655777)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-008" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:BC052920.1" FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650767..1650894, FT 1653035..1653150,1654027..1654073,1654147..1654270, FT 1655680..1655777)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-009" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067514.1 Em:AF067516.1" FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650767..1650894, FT 1653035..1653150,1654147..1654270,1655697..1655763)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-001" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067519.1" FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638964..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650767..1650894, FT 1653035..1653150,1654147..1654270,1655697..1655763)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-002" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067518.1" FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643866,1647785..1647917,1650797..1650894, FT 1653035..1653150,1654147..1654270,1655697..1655763)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-003" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067520.1" FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640957..1641079, FT 1643703..1643839,1647785..1647917,1650797..1650894, FT 1653035..1653150,1654147..1654270,1655697..1655763)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-004" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067521.1" FT mRNA complement(join(1634320..1634438,1634519..1634708, FT 1634915..1635063,1635263..1635379,1635478..1635585, FT 1635662..1635783,1635989..1636094,1636343..1636464, FT 1637081..1637171,1638848..1639023,1639619..1639684, FT 1640233..1640391,1640477..1640572,1640918..1641079, FT 1643703..1643839,1647785..1647917,1650797..1650894, FT 1653035..1653150,1654147..1654270,1655697..1655763)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-005" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: cDNAs: Em:AF067522.1" FT mRNA complement(join(1650880..1650894,1653035..1653150, FT 1654147..1654270,1655697..1655966)) FT /gene="CDC2L2" FT /locus_tag="RP1-283E3.2-012" FT /product="cell division cycle 2-like 2 (PITSLRE proteins)" FT /note="match: ESTs: Em:CD700159.1" FT mRNA join(1656054..1656202,1661685..1663343) FT /locus_tag="RP1-283E3.3-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK097814.1" FT polyA_site complement(1656277) FT polyA_signal complement(1656289..1656294) FT mRNA join(1663993..1664283,1667256..1667414) FT /locus_tag="RP1-283E3.8-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF816965.1 Em:BF817960.1" FT mRNA complement(join(1663697..1663962,1666129..1666274, FT 1666643..1666713)) FT /gene="SLC35E2" FT /locus_tag="RP1-283E3.5-004" FT /product="solute carrier family 35, member E2" FT /note="match: ESTs: Em:BQ018622.1" FT CDS join(1667256..1667354,1668291..1668690) FT /pseudo FT /locus_tag="RP1-283E3.4-001" FT /product="ribosomal protein S7 (RPS7) pseudogene" FT /note="match: proteins: Sw:O43105 Sw:P02362 Sw:P33514 FT Sw:P48155 Sw:P50894 Sw:P62083 Sw:Q23312 Sw:Q962S0 Sw:Q9NB21 FT Sw:Q9VA91 Sw:Q9ZNS1 Tr:O43105 Tr:P33514 Tr:Q6GTS0 Tr:Q801G5 FT Tr:Q86ET9 Tr:Q8IMI7 Tr:Q9C514 Tr:Q9M885" FT CDS complement(join(1656853..1656861,1666129..1666274, FT 1669760..1669887,1670361..1670496,1670675..1670996)) FT /gene="SLC35E2" FT /locus_tag="RP1-283E3.5-002" FT /standard_name="OTTHUMP00000039052" FT /product="solute carrier family 35, member E2" FT /protein_id="CAI20037.1" FT /translation="MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKS FT DGGTDENVLTVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEP FT SMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVS FT LKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRS FT PVPPSERHGVRPHGENLPGDFQAQ" FT CDS complement(join(1663894..1663962,1666129..1666274, FT 1669760..1669887,1670361..1670496,1670675..1670996)) FT /gene="SLC35E2" FT /locus_tag="RP1-283E3.5-001" FT /standard_name="OTTHUMP00000000895" FT /product="solute carrier family 35, member E2" FT /note="match: proteins: Tr:O75035 Tr:Q8C811 Tr:Q9Y3J8" FT /protein_id="CAI20038.1" FT /translation="MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKS FT DGGTDENVLTVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEP FT SMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVS FT LKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRS FT PVPPSERHGVRPHGENLPGDFQVPQALHRVALSMALPCPMLPAS" FT mRNA complement(join(1656277..1656861,1666129..1666274, FT 1669760..1669887,1670361..1670496,1670675..1671143, FT 1675690..1676107,1677163..1677358)) FT /gene="SLC35E2" FT /locus_tag="RP1-283E3.5-002" FT /product="solute carrier family 35, member E2" FT /note="match: cDNAs: Em:BC062371.1" FT mRNA complement(join(1663681..1663962,1666129..1666274, FT 1669760..1669887,1670361..1670496,1670675..1671143, FT 1677163..1677431)) FT /gene="SLC35E2" FT /locus_tag="RP1-283E3.5-001" FT /product="solute carrier family 35, member E2" FT /note="match: cDNAs: Em:AL049665.1" FT mRNA complement(join(1684414..1684499,1685006..1685088, FT 1685723..1685822)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-012" FT /product="NAD kinase" FT /note="match: ESTs: Em:BE940331.1" FT mRNA complement(join(1685604..1685647,1685723..1685822, FT 1685983..1686305)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-010" FT /product="NAD kinase" FT /note="match: ESTs: Em:AI523849.1" FT mRNA complement(join(1685642..1685822,1685983..1686335)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-011" FT /product="NAD kinase" FT /note="match: ESTs: Em:W37546.1" FT mRNA complement(join(1685602..1685822,1685983..1686137, FT 1686813..1686915,1687697..1687766)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-013" FT /product="NAD kinase" FT /note="match: ESTs: Em:AI831433.1" FT mRNA complement(join(<1685610..1685647,1685723..1685822, FT 1685983..1686137,1686813..1686915,1687697..1687782, FT 1687942..1688463)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-009" FT /product="NAD kinase" FT /note="match: ESTs: Em:BI523016.1" FT mRNA complement(join(1685620..1685647,1685723..1685822, FT 1685983..1686137,1687697..1687782,1687942..1688047)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-014" FT /product="NAD kinase" FT /note="match: ESTs: Em:AI239732.1" FT mRNA complement(join(<1685500..1685647,1685723..1685822, FT 1685983..1686137,1686813..1686915,1687697..1687782, FT 1687942..1688047,1688218..1688321,1688620..1688707)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-016" FT /product="NAD kinase" FT /note="match: ESTs: Em:BQ671152.1" FT mRNA complement(join(<1685782..1685822,1685983..1686137, FT 1686813..1686915,1687697..1687782,1687942..1688047, FT 1688178..1688321,1688620..1688667)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-008" FT /product="NAD kinase" FT /note="match: ESTs: Em:BI823649.1" FT mRNA complement(join(<1686111..1686137,1686813..1686915, FT 1687697..1687782,1687942..1688047,1688620..1688749, FT 1689804..1690014)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-017" FT /product="NAD kinase" FT /note="match: ESTs: Em:CF146785.1" FT CDS complement(join(<1686111..1686137,1686813..1686915, FT 1687697..1687782,1687942..1688047,1688620..1688749, FT 1689804..1689970)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-017" FT /standard_name="OTTHUMP00000039051" FT /product="NAD kinase" FT /protein_id="CAI20045.1" FT /translation="MGRPRVRQAWPGCCGHTGRLPAGRGYLASHMCDPAGAELIGDGMS FT DPTPPSNACTGHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQPFKELCTHLMEENMIV FT YVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQ FT GSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRS" FT CDS complement(join(1684343..1684499,1685006..1685088, FT 1685490..1685647,1685723..1685822,1685983..1686137, FT 1686813..1686915,1687697..1687782,1687942..1688096, FT 1688546..1688749,1690540..1690682,1691173..1691341, FT 1693391..1693474,1696667..1696845)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-001" FT /standard_name="OTTHUMP00000001109" FT /product="NAD kinase" FT /note="match: proteins: Sw:O95544 Tr:Q9H2P2" FT /protein_id="CAI20046.1" FT /translation="MEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSR FT SLSASPALGSTKEFRRTRSLHGPCPVTTFGPKACVLQNPQTIIATPLSLASQLLPSPAV FT SHSGQGGVTGQVHVLPQPSDQGVLSGPRAARGQTAPQEEAVTQEEVEALVCGHTQRWVP FT GPVYDAAAGGSGWAQLSLRAGMGVGQATGHIQDPASQRLTWNKSPKSVLVIKKMRDASL FT LQPFKELCTHLMEARGAGGKGAWGAHGVGGASIHITAPRVGSAGGMSRLALCFQENMIV FT YVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQ FT GSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLKVRVVKELRGKKTA FT VHNGLGENGSQAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQG FT DGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVVPAGVELKIMLSP FT EARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFESLAQCLHWNVRK FT KQAHFEEEEEEEEEG" FT CDS complement(join(1684343..1684499,1685006..1685088, FT 1685490..1685647,1685723..1685822,1685983..1686137, FT 1686813..1686915,1687697..1687782,1687942..1688047, FT 1688620..1688749,1693391..1693474,1696667..1696845)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-002" FT /standard_name="OTTHUMP00000001110" FT /product="NAD kinase" FT /note="match: proteins: Sw:P58058" FT /protein_id="CAA20354.1" FT /translation="MEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSR FT SLSASPALGSTKEFRRTRSLHGPCPVTTFGPKACVLQNPQTIMHIQDPASQRLTWNKSP FT KSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCT FT FREDYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQS FT QVTQVIEGNAAVVLRSRLKVRVVKELRGKKTAVHNGLGENGSQAAGLDMDVGKQAMQYQ FT VLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNV FT PAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISIT FT TSCYPLPSICVRDPVSDWFESLAQCLHWNVRKKQAHFEEEEEEEEEG" FT mRNA complement(join(1682671..1684499,1685006..1685088, FT 1685490..1685647,1685723..1685822,1685983..1686137, FT 1686813..1686915,1687697..1687782,1687942..1688047, FT 1688620..1688749,1693391..1693474,1696667..1696885, FT 1709728..1709909)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-003" FT /product="NAD kinase" FT /note="match: cDNAs: Em:AK023114.1" FT mRNA complement(join(1688027..1688321,1688620..1688749, FT 1693391..1693474,1696667..1696885,1709728..1709858)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-007" FT /product="NAD kinase" FT /note="match: ESTs: Em:BI838594.1" FT mRNA complement(join(1688210..1688749,1693391..1693474, FT 1696667..1696885,1709728..1709858)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-006" FT /product="NAD kinase" FT /note="match: ESTs: Em:BM553002.1" FT mRNA complement(join(1693104..1693474,1696667..1696885, FT 1709728..1709859)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-005" FT /product="NAD kinase" FT /note="match: ESTs: Em:CB960609.1" FT mRNA complement(join(1682671..1684499,1685006..1685088, FT 1685490..1685647,1685723..1685822,1685983..1686137, FT 1686813..1686915,1687697..1687782,1687942..1688047, FT 1688620..1688749,1693391..1693474,1696667..1696885, FT 1710185..1710229)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-002" FT /product="NAD kinase" FT /note="match: cDNAs: Em:BC001709.1" FT mRNA complement(join(1682671..1684499,1685006..1685088, FT 1685490..1685647,1685723..1685822,1685983..1686137, FT 1686813..1686915,1687697..1687782,1687942..1688096, FT 1688546..1688749,1690540..1690682,1691173..1691341, FT 1693391..1693474,1696667..1696885,1711344..1711508)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-001" FT /product="NAD kinase" FT /note="match: cDNAs: Em:AF250320.1" FT mRNA complement(join(1687341..1687782,1687942..1688046, FT 1688619..1688749,1693391..1693474,1696667..1696885, FT 1711344..1711401)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-015" FT /product="NAD kinase" FT /note="match: ESTs: Em:BM561982.1" FT mRNA complement(join(1710596..1710635,1711344..1711468, FT 1711721..1711896)) FT /gene="NADK" FT /locus_tag="RP1-283E3.6-004" FT /product="NAD kinase" FT /note="match: ESTs: Em:BM152956.1" FT mRNA complement(join(1716725..1718492,1718761..1718876, FT 1720492..1720708,1721834..1722035,1724684..1724750, FT AL109917.22:7595..7757,AL109917.22:9651..9714, FT AL109917.22:18932..19038,AL109917.22:21013..21051, FT AL109917.22:28573..28675,AL109917.22:42366..42414, FT AL109917.22:93996..94232)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-001" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: cDNAs: Em:BC005888.1 Em:BC008991.1" FT /note="match: ESTs: Em:AI859787.1 Em:AI870905.1 FT Em:AW410846.1 Em:BE857618.1 Em:BG763495.1 Em:BG939034.1 FT Em:BM785440.1 Em:BQ004908.1 Em:BQ674371.1 Em:BQ681428.1 FT Em:BQ690171.1 Em:BQ941415.1 Em:BQ959062.1 Em:BQ962318.1 FT Em:CA414963.1 Em:CN309169.1" FT polyA_site complement(1716725) FT polyA_signal complement(1716743..1716748) FT mRNA complement(join(1718126..1718876,1720492..1720708, FT 1721834..1722035,1724684..>1724753)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-004" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: ESTs: Em:BE269862.1 Em:BE836929.1 FT Em:BE836941.1 Em:BE836953.1 Em:BG106633.1 Em:BQ068648.1 FT Em:BU684892.1 Em:CF552646.1 Em:H18861.1" FT CDS complement(join(1718770..1718876,1720492..1720708, FT 1721834..1722035,1724684..>1724753)) FT /codon_start=3 FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-004" FT /standard_name="OTTHUMP00000001108" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /protein_id="CAI20051.1" FT /translation="GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM FT SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD FT ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG FT VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN" FT mRNA complement(join(1719426..1720708,1721834..1722035, FT 1724684..1725636)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-003" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: cDNAs: Em:AK096614.1" FT misc_feature 1730264..1893454 FT /note="annotated region of clone" FT mRNA complement(join(AL031282.1:100845..101053, FT AL031282.1:102179..102380,AL031282.1:105029..105095, FT 1735858..1736020,1737914..1737977,1747195..1747301, FT 1749126..1749825)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-002" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: cDNAs: Em:AB070162.1" FT mRNA complement(join(1885363..1887289,1888059..1888223, FT 1890559..1890648,1891403..1891469,AL391845.49:3734..3852, FT AL391845.49:4873..5046,AL391845.49:6356..6511, FT AL391845.49:8620..8818,AL391845.49:10644..10801, FT AL391845.49:11965..12067,AL391845.49:12922..13032, FT AL391845.49:14010..14183,AL391845.49:25371..25475, FT AL391845.49:26922..27020,AL391845.49:28497..>28620)) FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-001" FT /product="KIAA1751" FT /note="match: cDNAs: Em:AB051538.1" FT /note="match: ESTs: Em:AL597773.1" FT CDS complement(join(1887017..1887289,1888059..1888223, FT 1890559..1890648,1891403..1891469,AL391845.49:3734..3852, FT AL391845.49:4873..5046,AL391845.49:6356..6511, FT AL391845.49:8620..8818,AL391845.49:10644..10801, FT AL391845.49:11965..12067,AL391845.49:12922..13032, FT AL391845.49:14010..14183,AL391845.49:25371..25475, FT AL391845.49:26922..27020,AL391845.49:28497..>28620)) FT /codon_start=3 FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-001" FT /standard_name="OTTHUMP00000001191" FT /product="KIAA1751" FT /note="match: proteins: Tr:Q8BI90 Tr:Q9C0B2" FT /protein_id="CAI95650.1" FT /translation="DADKLKKKTAEDRTQAFHLRQNLSALDKMHEEQELFTEKMRGELR FT ACRQRRDLIDKQQEAVAAEIATEEEAGNMAAVGRLQAVSRRLFAELENERDLQSRTEAV FT LKESENTMWHIEIQEGRLEAFRTADREEVEATGRRLQVRAAEQLCREQEALGKVERNRL FT LRIRKSLNTQKELGLRHQKLLEDARKNHKVAVRFLKASLGRIREQEKKEEMECHEYMRR FT RMDAVVALKGSISANRDTLRKFQAWDRAKAELAEQRVQAEKKAILAQGRDAFRHLVHQR FT RRQELEAQKRAFEEEQKLRKQEIISRILKEEAEEEKRKKQHPPTSARHRLTLRDKTWNY FT ISDFCKKTTVPTNTYTLDYEAAAGPGPSRLLEVVSSELIQGDPGASSEEETLAEPEISG FT LWNEDYKPYQVPKEDVDRKPVGGTKMDKDILERTVERLRSRVVHKQVVWGREFQGRPFN FT SKPELLHFQDFDIGKVYKKKITLVNTTYTINYCKLVGVEEHLRDFIHVDFDPPGPLSAG FT MSCEVLVTFKPMINKDLEGNISFLAQTGEFSVPLKCSTKKCSLSLDKELIDFGSYVVGE FT TTSRTITLTNVGGLGTTFKFLPASEPCEMDDSQSALKLSSLLTYEDKSLYDKAATSFSE FT QQLEGTESSQADMQSRKELEKLDKEQEEEQPAGEPGCQAKPGWAGGEGLRAAFQGAEGP FT RGGLESREFS" FT CDS complement(join(<1735847..1736020,1737914..1737977, FT 1747195..1747301,1756836..1756892)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-005" FT /standard_name="OTTHUMP00000039044" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /protein_id="CAI95652.1" FT /translation="MSELDQLRQEAEQLKNQIRITNNIDPVGRIQMRTRRTLRGHLAKI FT YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL FT DNICSIYNLKTREGNVRVSRELAGHTGTCP" FT CDS complement(join(<1735965..1736020,1737914..1737977, FT 1747195..1747301,1749276..1749314,1756836..1756892)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-006" FT /standard_name="OTTHUMP00000039045" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /protein_id="CAI95651.1" FT /translation="MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQM FT RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA FT YAPS" FT CDS complement(join(<1735847..1736020,1737914..1737977, FT 1747195..1747301,1749276..1749314,1756836..1756892)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-007" FT /standard_name="OTTHUMP00000039046" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /protein_id="CAI95653.1" FT /translation="MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQM FT RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA FT YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGTCP" FT CDS complement(join(AL031282.1:99115..99221, FT AL031282.1:100837..101053,AL031282.1:102179..102380, FT AL031282.1:105029..105095,1735858..1736020, FT 1737914..1737977,1747195..1747301,1749276..1749314, FT 1756836..1756892)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-001" FT /standard_name="OTTHUMP00000001107" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: proteins: Sw:P17343 Sw:P54311 Sw:P62874 FT Sw:P79959 Tr:P62873 Tr:Q803H5 Tr:Q805B3 Tr:Q9DFH0" FT /protein_id="CAI95654.1" FT /translation="MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQM FT RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA FT YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD FT TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF FT TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS FT GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN FT " FT misc_feature 1761094..1761098 FT /note="Assembly confirmed by restriction digest data" FT mRNA complement(join(<1735965..1736020,1737914..1737977, FT 1747195..1747301,1749276..1749314,1756836..1756938, FT 1763671..1763724)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-006" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: ESTs: Em:BQ639336.1" FT misc_feature 1819227..1819314 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(<1735847..1736020,1737914..1737977, FT 1747195..1747301,1749276..1749314,1756836..1756938, FT 1770629..1770677,1771068..1771121,1821803..1821840)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-007" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: ESTs: Em:BQ953489.1" FT mRNA complement(join(<1735847..1736020,1737914..1737977, FT 1747195..1747301,1756836..1756938,1770629..1770677, FT 1822259..1822275)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-005" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: ESTs: Em:BE159042.1" FT mRNA complement(join(1756598..1756938,1770629..1770677, FT 1822259..1822405)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-008" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: ESTs: Em:BM142457.1" FT mRNA complement(join(AL031282.1:97070..98837, FT AL031282.1:99106..99221,AL031282.1:100837..101053, FT AL031282.1:102179..102380,AL031282.1:105029..105095, FT 1735858..1736020,1737914..1737977,1747195..1747301, FT 1749276..1749314,1756836..1756938,1770629..1770677, FT 1822259..1822495)) FT /gene="GNB1" FT /locus_tag="RP1-283E3.7-001" FT /product="guanine nucleotide binding protein (G protein), FT beta polypeptide 1" FT /note="match: cDNAs: Em:BC005888.1 Em:BC008991.1" FT /note="match: ESTs: Em:AI859787.1 Em:AI870905.1 FT Em:AW410846.1 Em:BE857618.1 Em:BG763495.1 Em:BG939034.1 FT Em:BM785440.1 Em:BQ004908.1 Em:BQ674371.1 Em:BQ681428.1 FT Em:BQ690171.1 Em:BQ941415.1 Em:BQ959062.1 Em:BQ962318.1 FT Em:CA414963.1 Em:CN309169.1" FT mRNA join(1822910..1823290,1823573..1824097) FT /locus_tag="RP1-140A9.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BX362209.1" FT misc_feature 1842331..1842332 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(<1846266..1846746,1847124..1847174,1847880..1848054, FT 1848191..1848335,1848413..1848513,1848586..1848733) FT /gene="CALML6" FT /locus_tag="RP1-140A9.2-004" FT /product="calmodulin-like 6" FT /note="match: cDNAs: Em:AF490905.2 Em:AY566229.1" FT /note="match: ESTs: Em:AA993055.1 Em:BM680440.1" FT mRNA join(<1846547..1846746,1847880..1848054,1848191..1848335, FT 1848413..1848513,1848586..1848733) FT /gene="CALML6" FT /locus_tag="RP1-140A9.2-001" FT /product="calmodulin-like 6" FT /note="match: ESTs: Em:BM680440.1 Em:BM717980.1" FT mRNA join(1846705..1848335,1848413..1848513,1848586..1848735) FT /gene="CALML6" FT /locus_tag="RP1-140A9.2-002" FT /product="calmodulin-like 6" FT /note="match: cDNAs: Em:BC053567.1" FT CDS join(1846720..1846746,1847880..1848054,1848191..1848335, FT 1848413..1848513,1848586..1848632) FT /gene="CALML6" FT /locus_tag="RP1-140A9.2-001" FT /standard_name="OTTHUMP00000001117" FT /product="calmodulin-like 6" FT /protein_id="CAI95655.1" FT /translation="MGLQQEISLTERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLM FT SLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALMGVYHEKAQNQESELRAAFRVFDK FT EGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGESFKLI FT Q" FT CDS join(1846720..1846746,1847124..1847174,1847880..1848054, FT 1848191..1848335,1848413..1848513,1848586..1848632) FT /gene="CALML6" FT /locus_tag="RP1-140A9.2-004" FT /standard_name="OTTHUMP00000179025" FT /product="calmodulin-like 6" FT /note="match: proteins: Sw:Q8TD86.2" FT /protein_id="CAM12839.1" FT /translation="MGLQQEISLQPWCHHPAESCQTTTDMTERLSAEQIKEYKGVFEMF FT DEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALMGVYHEK FT AQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTI FT DYEEFVAMMTGESFKLIQ" FT mRNA join(1846848..1847174,1848191..1848335,1848413..1848510) FT /gene="CALML6" FT /locus_tag="RP1-140A9.2-003" FT /product="calmodulin-like 6" FT /note="match: ESTs: Em:AA190573.1" FT polyA_signal 1848717..1848722 FT polyA_site 1848733 FT mRNA complement(join(1849029..1849601,1849692..>1850236)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-004" FT /product="transmembrane protein 52" FT /note="match: cDNAs: Em:AY358544.1" FT /note="match: ESTs: Em:AA447941.1 Em:BM792436.1" FT CDS complement(join(1849321..1849601,1849692..1849995)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-004" FT /standard_name="OTTHUMP00000039100" FT /product="transmembrane protein 52" FT /note="match: proteins: Tr:Q6UX25" FT /protein_id="CAI95656.1" FT /translation="MERHCLLFILLTCLRWLCHDIPQGAGARWPRVSPVVEPCSPRLIL FT LAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLPPARQPCDVAVIPMDSDSPVHSTVTSYS FT SVQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKMAKPREEGPALSQKPS FT PLLGASGLETTPVPQESGPNTQLPPCSPGAP" FT mRNA complement(join(1849253..1849510,1850332..1850373, FT 1850484..>1850697)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-005" FT /product="transmembrane protein 52" FT /note="match: ESTs: Em:BM458237.1" FT CDS complement(join(1849392..1849510,1850332..1850373, FT 1850484..>1850697)) FT /codon_start=1 FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-005" FT /standard_name="OTTHUMP00000039054" FT /product="transmembrane protein 52" FT /protein_id="CAI95657.1" FT /translation="GGRWPPADCGCCCRSCRSCRSCRCRRWVGRRSLSVRPPRGGSLLG FT PRPSRAHPCPHRWRWASRTAAATPRTSARPRPAGAACGTWACTPRSLHPPTMKLSRWPS FT PERKDQHSPRNPALSLGPRA" FT mRNA complement(join(<1849825..1849870,1850332..1850373, FT 1850484..>1850708)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-002" FT /product="transmembrane protein 52" FT /note="match: ESTs: Em:BM312773.1" FT CDS complement(join(<1849825..1849870,1850332..1850373, FT 1850484..1850704)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-002" FT /standard_name="OTTHUMP00000001119" FT /product="transmembrane protein 52" FT /protein_id="CAI95658.1" FT /translation="MARGPLAARGLRLLLPLLPLLPLLPLPQVGRAAFSLGSATAGRVP FT ARTTPLPGSPLSPQVALGFADGSCDPSDQCPPQARWSSLWHVGLILLAVLLLLLCGVT" FT mRNA complement(join(1849030..1849601,1849692..1849870, FT 1850332..1850373,1850484..1850527,1850621..>1850712)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-001" FT /product="transmembrane protein 52" FT /note="match: cDNAs: Em:AJ278736.1 Em:AK009779.1" FT CDS complement(join(1849321..1849601,1849692..1849870, FT 1850332..1850373,1850484..1850527,1850621..1850704)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-001" FT /standard_name="OTTHUMP00000001118" FT /product="transmembrane protein 52" FT /note="match: proteins: Tr:Q8NDY8" FT /protein_id="CAI95659.1" FT /translation="MARGPLAARGLRLLLPLLPLLPLLPLPQVALGFADGSCDPSDQCP FT PQARWSSLWHVGLILLAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLPPARQPCDVAVIP FT MDSDSPVHSTVTSYSSVQYPLGMRLPLPFGELDLDSMAPPAYSLYTPEPPPSYDEAVKM FT AKPREEGPALSQKPSPLLGASGLETTPVPQESGPNTQLPPCSPGAP" FT mRNA complement(join(1849376..1849601,1849692..1849870, FT 1850332..1850527,1850621..1850695)) FT /gene="TMEM52" FT /locus_tag="RP1-140A9.3-003" FT /product="transmembrane protein 52" FT /note="match: ESTs: Em:BM459790.1" FT misc_feature 1853590 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 120bp by restriction digest data" FT misc_feature 1853591..1853674 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(1853396..1853827,1854028..1854162, FT 1854424..1854584,1854806..1854938,1855214..1855368, FT 1855830..1855959,1857222..1857377,1857667..1857786, FT 1857896..1857951,1858091..1859368)) FT /locus_tag="RP1-140A9.4-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AL137547.1" FT /note="match: ESTs: Em:AW665824.1 Em:BI774848.1 FT Em:CA466698.1" FT misc_feature 1858825 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1200bp by restriction digest data" FT mRNA complement(join(1853396..1853827,1854028..1854162, FT 1854424..1854584,1854806..1854938,1855214..1855368, FT 1855830..1855959,1857667..1857786,1857896..1857951, FT 1858091..1858200,1858333..1858467,1859046..>1859185)) FT /locus_tag="RP1-140A9.4-002" FT /product="novel protein" FT /note="match: ESTs: Em:AW665824.1 Em:BI341188.1 FT Em:BI774848.1 Em:CK600275.1" FT CDS complement(join(1853726..1853827,1854028..1854162, FT 1854424..1854584,1854806..1854938,1855214..1855368, FT 1855830..1855959,1857667..1857786,1857896..1857951, FT 1858091..1858200,1858333..1858467,1859046..>1859185)) FT /codon_start=1 FT /locus_tag="RP1-140A9.4-002" FT /standard_name="OTTHUMP00000161501" FT /product="novel protein" FT /protein_id="CAM12840.1" FT /translation="FRKNMAPQRKDLHGLSFSVLRAQNRDKLFKVSVPHVLEMRKRELR FT PSSDEYQAARATLLRAFQAKFDTFVVPCVVASGDIKDRKGSEPLSFSPHNTLYLELWCP FT TVAPSVVVTSHKGKTIFNFGDVAVGHRSIKKISIQNVSPEDLALDFSLLNPNGPFVLLN FT HSSLLRAGGTQVLVLSFSPHESILLQNNSLLPIKFSMHLDSLSSTRGRGQQQLPQFLSS FT PSQRTEVVGTQNLNGQSVFSVAPVKGVMDPGKTQDFTVTFSPDHESLYFSDKLQVVLFE FT KKISHQILLKGAACQHMMFVEGGDPLDVPVESLTAIPVFDPRHREASSRPGPLSPEAEE FT LRPILVTLDYIQFDTDTPAPPATRELQVGCIRTTQPSPKKTVEFSIDSVASLQHKGFSI FT EPSRGSVERGQTKTISISWVPPADFDPDHPLMVSALLQLRGDVKETYKVIFVAQVLTGP FT " FT misc_feature 1891454 FT /note="Clone_right_end: RP1-140A9" FT misc_feature 1893455..2024338 FT /note="annotated region of clone" FT misc_feature 1911326..1911412 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(AL109917.22:157100..159026, FT AL109917.22:159796..159960,AL109917.22:162296..162385, FT AL109917.22:163140..163206,1895188..1895306, FT 1896327..1896500,1897810..1897965,1900074..1900272, FT 1902098..1902255,1903419..1903521,1904376..1904486, FT 1905464..1905637,1916825..1916929,1918376..1918474, FT 1919951..>1920074)) FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-001" FT /product="KIAA1751" FT /note="match: ESTs: Em:AL597773.1" FT /note="match: cDNAs: Em:AB051538.1" FT CDS complement(join(AL109917.22:158754..159026, FT AL109917.22:159796..159960,AL109917.22:162296..162385, FT AL109917.22:163140..163206,1895188..1895306, FT 1896327..1896500,1897810..1897965,1900074..1900272, FT 1902098..1902255,1903419..1903521,1904376..1904486, FT 1905464..1905637,1916825..1916929,1918376..1918474, FT 1919951..>1920074)) FT /codon_start=3 FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-001" FT /standard_name="OTTHUMP00000001191" FT /product="KIAA1751" FT /note="match: proteins: Tr:Q8BI90 Tr:Q9C0B2" FT /protein_id="CAI15433.1" FT /translation="DADKLKKKTAEDRTQAFHLRQNLSALDKMHEEQELFTEKMRGELR FT ACRQRRDLIDKQQEAVAAEIATEEEAGNMAAVGRLQAVSRRLFAELENERDLQSRTEAV FT LKESENTMWHIEIQEGRLEAFRTADREEVEATGRRLQVRAAEQLCREQEALGKVERNRL FT LRIRKSLNTQKELGLRHQKLLEDARKNHKVAVRFLKASLGRIREQEKKEEMECHEYMRR FT RMDAVVALKGSISANRDTLRKFQAWDRAKAELAEQRVQAEKKAILAQGRDAFRHLVHQR FT RRQELEAQKRAFEEEQKLRKQEIISRILKEEAEEEKRKKQHPPTSARHRLTLRDKTWNY FT ISDFCKKTTVPTNTYTLDYEAAAGPGPSRLLEVVSSELIQGDPGASSEEETLAEPEISG FT LWNEDYKPYQVPKEDVDRKPVGGTKMDKDILERTVERLRSRVVHKQVVWGREFQGRPFN FT SKPELLHFQDFDIGKVYKKKITLVNTTYTINYCKLVGVEEHLRDFIHVDFDPPGPLSAG FT MSCEVLVTFKPMINKDLEGNISFLAQTGEFSVPLKCSTKKCSLSLDKELIDFGSYVVGE FT TTSRTITLTNVGGLGTTFKFLPASEPCEMDDSQSALKLSSLLTYEDKSLYDKAATSFSE FT QQLEGTESSQADMQSRKELEKLDKEQEEEQPAGEPGCQAKPGWAGGEGLRAAFQGAEGP FT RGGLESREFS" FT CDS complement(join(1916821..1916929,1918376..1918474, FT 1919951..1920094,1920328..1920412,1922329..1922395)) FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-002" FT /standard_name="OTTHUMP00000038577" FT /product="KIAA1751" FT /note="match: proteins: Tr:Q6ZSJ4" FT /protein_id="CAI15434.1" FT /translation="MEDDGSLLPEDELLADALLLEDERDELEDPEFDIKCLLQEAEDDV FT DPGHSSSVKELDTDADKLKKKTAEDRTQAFHLRQNLSALDKMHEEQELFTEKMRGELRA FT CRQRRDLIDKQQEAVAAEIATEEEAGNMAAVGRLQAVSRRLFAELENERDLQSRTEAVL FT KESE" FT mRNA complement(join(1919401..1919572,1919951..1920094, FT 1920328..1920412,1922329..>1922368)) FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-003" FT /product="KIAA1751" FT /note="match: ESTs: Em:BQ011193.1 Em:BQ011569.1" FT CDS complement(join(1919563..1919572,1919951..1920094, FT 1920328..1920412,1922329..>1922368)) FT /codon_start=1 FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-003" FT /standard_name="OTTHUMP00000039101" FT /product="KIAA1751" FT /protein_id="CAI15435.1" FT /translation="EDELLADALLLEDERDELEDPEFDIKCLLQEAEDDVDPGHSSSVK FT ELDTDADKLKKKTAEDRTQAFHLRQNLSALDKMHEEQELFTEKMSVS" FT mRNA complement(join(1915110..1916551,1916778..1916929, FT 1918376..1918474,1919951..1920094,1920328..1920412, FT 1922329..1922414,1935140..>1935276)) FT /gene="KIAA1751" FT /locus_tag="RP1-140A9.6-002" FT /product="KIAA1751" FT /note="match: cDNAs: Em:AK127388.1" FT mRNA complement(join(1944652..1946439,1946804..1946969)) FT /locus_tag="RP11-547D24.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK054708.1" FT misc_feature 1946908 FT /note="Clone_left_end: RP3-484O5" FT misc_feature 1948620..1949016 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT mRNA join(<1950780..1950930,1956381..1956493,1956773..1956840, FT 1956957..1957177,1959016..1959098,1959594..1959731, FT 1960550..1960705,1960990..1961201,1961422..1962192) FT /gene="GABRD" FT /locus_tag="RP11-547D24.2-001" FT /product="gamma-aminobutyric acid (GABA) A receptor, delta" FT /note="match: cDNAs: Em:AF016917.1 Em:AF326546.1 FT Em:AF326564.1 Em:BC033801.1 Em:M35162.1 Em:S42882.1" FT /note="match: ESTs: Em:BG702804.1" FT CDS join(1950863..1950930,1956381..1956493,1956773..1956840, FT 1956957..1957177,1959016..1959098,1959594..1959731, FT 1960550..1960705,1960990..1961201,1961422..1961721) FT /gene="GABRD" FT /locus_tag="RP11-547D24.2-001" FT /standard_name="OTTHUMP00000038578" FT /product="gamma-aminobutyric acid (GABA) A receptor, delta" FT /note="match: proteins: Sw:O14764 Sw:P18506 Sw:P22933 FT Tr:Q8VBV6" FT /protein_id="CAI15436.1" FT /translation="MDAPARLLAPLLLLCAQQLRGTRAMNDIGDYVGSNLEISWLPNLD FT GLIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNH FT TNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVA FT CDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFT FT TELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVS FT LGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYRKK FT QKAKVKVSRPRAEMDVRNAIVLFSLSAAGVTQELAISRRQRRVPGNLMGSYRSVGVETG FT ETKKEGAARSGGQGGIRARLRPIDADTIDIYARAVFPAAFAAVNVIYWAAYAM" FT polyA_signal 1962159..1962164 FT polyA_site 1962192 FT misc_feature 1974400..1974550 FT /note="Sequence from overlapping clone RP3-484O5 FT (AL645703). Assembly confirmed by restriction digest" FT misc_feature 1979645..1979839 FT /note="Sequence from overlapping clone RP3-484O5 FT (AL645703). Assembly confirmed by restriction digest" FT misc_feature 1980652..1980971 FT /note="Sequence from overlapping clone RP3-484O5 FT (AL645703). Assembly confirmed by restriction digest" FT mRNA complement(join(1980642..1980907,1981037..1981090)) FT /locus_tag="RP11-547D24.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW662737.1" FT mRNA complement(join(1980743..1980907,1981037..1981105, FT 1981307..1981509)) FT /locus_tag="RP11-547D24.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA397625.1" FT mRNA join(<1981909..1982140,1986880..1987001,1987923..1988012, FT 1990980..1991030,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9844, FT AL590822.36:14861..14958,AL590822.36:28384..28470, FT AL590822.36:30921..31056,AL590822.36:31167..31254, FT AL590822.36:32763..32882,AL590822.36:33620..33699, FT AL590822.36:34090..34179,AL590822.36:43449..43564, FT AL590822.36:43788..44261) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-001" FT /product="protein kinase C, zeta" FT /note="match: cDNAs: Em:BC008058.1 Em:BC008058.2 FT Em:BC014270.1 Em:BC014270.2 Em:BT007082.1 Em:L14283.1" FT mRNA join(1981924..1982140,1986880..1987001,1990980..1991030, FT AL645703.18:44363..44448,AL590822.36:3076..3207, FT AL590822.36:4893..>4974) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-007" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:BG329855.1" FT mRNA join(1981942..1982140,1986880..1987199) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-013" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:CN412441.1" FT CDS join(1982070..1982140,1986880..1987001,1987923..1988012, FT 1990980..1991030,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9844, FT AL590822.36:14861..14958,AL590822.36:28384..28470, FT AL590822.36:30921..31056,AL590822.36:31167..31254, FT AL590822.36:32763..32882,AL590822.36:33620..33699, FT AL590822.36:34090..34179,AL590822.36:43449..43564, FT AL590822.36:43788..43875) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-001" FT /standard_name="OTTHUMP00000001368" FT /product="protein kinase C, zeta" FT /note="match: proteins: Sw:O19111 Sw:P09217 Sw:Q02956 FT Sw:Q05513 Tr:Q05513 Tr:Q9JLP6" FT /protein_id="CAI15438.1" FT /translation="MPSRTGPKMEGSGGRVRLKAHYGGDIFITSVDAATTFEELCEEVR FT DMCRLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLARQCRDEGLIIHVFPSTPEQPG FT LPCPGEDKSIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGQCSERIWGLARQGYRCIN FT CKLLVHKRCHGLVPLTCRKHMDSVMPSQEPPVDDKNEDADLPSEETDGIAYISSSRKHD FT SIKDDSEDLKPVIDGMDGIKISQGLGLQDFDLIRVIGRGSYAKVLLVRLKKNDQIYAMK FT VVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMF FT HMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCK FT EGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNP FT DMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAF FT FRSIDWDLLEKKQALPPFQPQITDDYGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEFE FT GFEYINPLLLSTEESV" FT mRNA join(1986880..1987001,1987923..1988012,1990980..1991030, FT 2002738..2002975) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-008" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:BE740250.1" FT mRNA join(1987118..1987315,1987923..1988012,1990980..1991030, FT AL645703.18:44363..44448) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-014" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DA828129.1" FT mRNA join(2004901..2005368,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9844, FT AL590822.36:14861..14958,AL590822.36:28384..28470, FT AL590822.36:30921..31056,AL590822.36:31167..31254, FT AL590822.36:32763..32882,AL590822.36:33620..33699, FT AL590822.36:34090..34179,AL590822.36:43449..43564, FT AL590822.36:43788..44256) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-009" FT /product="protein kinase C, zeta" FT /note="match: cDNAs: Em:CR926012.1" FT /note="match: ESTs: Em:AL538613.2 Em:BI550905.1 FT Em:DA392984.1" FT mRNA join(2005158..2005368,AL645703.18:7448..7656, FT AL645703.18:44363..44448,AL590822.36:3076..3207, FT AL590822.36:4893..4952) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-020" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DA510395.1" FT mRNA join(<2005425..2005714,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..>4931) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-015" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DC312466.1" FT CDS join(2005693..2005714,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..>4931) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-015" FT /standard_name="OTTHUMP00000196802" FT /product="protein kinase C, zeta" FT /protein_id="CAO72114.1" FT /translation="MLTPRTDESIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGQCSE FT RIWGLARQGYRCINCKLLVHKRCHGLVPLTCRKHMDSVMPSQEPPVDD" FT mRNA join(2006127..2006206,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9702) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-016" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DC326758.1" FT mRNA join(2006294..2006572,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9811) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-017" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:BP307516.1 Em:DC304119.1 FT Em:DC305359.1" FT mRNA join(2006683..2006818,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9729) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-018" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DC320083.1 Em:DC328574.1" FT mRNA join(2013687..2013899,AL645703.18:44363..44448, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9802) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-019" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DA083551.1 Em:DC305005.1" FT misc_feature 2022338 FT /note="Clone_right_end: RP11-547D24" FT misc_feature 2024339..2069906 FT /note="annotated region of clone" FT mRNA join(2036155..2036334,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..>9736) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-003" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:AL542576.2 Em:AU137858.1 FT Em:AU138321.1 Em:AU138397.1 Em:AU138706.1 Em:AU138889.1 FT Em:BG571791.1" FT mRNA join(2036178..2036334,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4204..4377, FT AL590822.36:4893..4974,AL590822.36:7738..7790, FT AL590822.36:9656..9844,AL590822.36:14861..14953) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-022" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:AL575282.3 Em:DB034296.1" FT mRNA join(2043093..2043256,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..>9844) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-010" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:AL044353.1 Em:BI560781.1" FT misc_feature 2043372..2043567 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(2047644..2047749,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9763) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-021" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DC337887.1" FT mRNA join(2065164..2065439,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..>7790) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-004" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:BE537476.1 Em:BF125400.1" FT misc_feature 2065907 FT /note="Clone_left_end: RP5-892K4" FT mRNA join(2066252..2066525,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..>4964) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-006" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:BG898174.1" FT mRNA join(2066429..2066525,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4255..4377, FT AL590822.36:4893..4974,AL590822.36:7738..7790, FT AL590822.36:9656..>9845) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-011" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:CD251012.1" FT mRNA join(AL391845.49:<90455..90686,AL391845.49:95426..95547, FT AL391845.49:96469..96558,AL391845.49:99526..99576, FT 2066701..2066786,AL590822.36:3076..3207, FT AL590822.36:4893..4974,AL590822.36:7738..7790, FT AL590822.36:9656..9844,AL590822.36:14861..14958, FT AL590822.36:28384..28470,AL590822.36:30921..31056, FT AL590822.36:31167..31254,AL590822.36:32763..32882, FT AL590822.36:33620..33699,AL590822.36:34090..34179, FT AL590822.36:43449..43564,AL590822.36:43788..44261) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-001" FT /product="protein kinase C, zeta" FT /note="match: cDNAs: Em:BC008058.1 Em:BC008058.2 FT Em:BC014270.1 Em:BC014270.2 Em:BT007082.1 Em:L14283.1" FT mRNA join(AL391845.49:90470..90686,AL391845.49:95426..95547, FT AL391845.49:99526..99576,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..>4974) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-007" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:BG329855.1" FT CDS join(AL391845.49:90616..90686,AL391845.49:95426..95547, FT AL391845.49:96469..96558,AL391845.49:99526..99576, FT 2066701..2066786,AL590822.36:3076..3207, FT AL590822.36:4893..4974,AL590822.36:7738..7790, FT AL590822.36:9656..9844,AL590822.36:14861..14958, FT AL590822.36:28384..28470,AL590822.36:30921..31056, FT AL590822.36:31167..31254,AL590822.36:32763..32882, FT AL590822.36:33620..33699,AL590822.36:34090..34179, FT AL590822.36:43449..43564,AL590822.36:43788..43875) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-001" FT /standard_name="OTTHUMP00000001368" FT /product="protein kinase C, zeta" FT /note="match: proteins: Sw:O19111 Sw:P09217 Sw:Q02956 FT Sw:Q05513 Tr:Q05513 Tr:Q9JLP6" FT /protein_id="CAI21535.1" FT /translation="MPSRTGPKMEGSGGRVRLKAHYGGDIFITSVDAATTFEELCEEVR FT DMCRLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLARQCRDEGLIIHVFPSTPEQPG FT LPCPGEDKSIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGQCSERIWGLARQGYRCIN FT CKLLVHKRCHGLVPLTCRKHMDSVMPSQEPPVDDKNEDADLPSEETDGIAYISSSRKHD FT SIKDDSEDLKPVIDGMDGIKISQGLGLQDFDLIRVIGRGSYAKVLLVRLKKNDQIYAMK FT VVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMF FT HMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCK FT EGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNP FT DMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAF FT FRSIDWDLLEKKQALPPFQPQITDDYGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEFE FT GFEYINPLLLSTEESV" FT mRNA join(AL391845.49:95664..95861,AL391845.49:96469..96558, FT AL391845.49:99526..99576,2066701..2066786) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-014" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DA828129.1" FT mRNA join(AL391845.49:113447..113914,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9844, FT AL590822.36:14861..14958,AL590822.36:28384..28470, FT AL590822.36:30921..31056,AL590822.36:31167..31254, FT AL590822.36:32763..32882,AL590822.36:33620..33699, FT AL590822.36:34090..34179,AL590822.36:43449..43564, FT AL590822.36:43788..44256) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-009" FT /product="protein kinase C, zeta" FT /note="match: cDNAs: Em:CR926012.1" FT /note="match: ESTs: Em:AL538613.2 Em:BI550905.1 FT Em:DA392984.1" FT mRNA join(AL391845.49:113704..113914,2029786..2029994, FT 2066701..2066786,AL590822.36:3076..3207, FT AL590822.36:4893..4952) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-020" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DA510395.1" FT mRNA join(AL391845.49:<113971..114260,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..>4931) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-015" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DC312466.1" FT CDS join(AL391845.49:114239..114260,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..>4931) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-015" FT /standard_name="OTTHUMP00000196802" FT /product="protein kinase C, zeta" FT /protein_id="CAO72063.1" FT /translation="MLTPRTDESIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGQCSE FT RIWGLARQGYRCINCKLLVHKRCHGLVPLTCRKHMDSVMPSQEPPVDD" FT mRNA join(AL391845.49:114673..114752,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9702) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-016" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DC326758.1" FT mRNA join(AL391845.49:114840..115118,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9811) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-017" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:BP307516.1 Em:DC304119.1 FT Em:DC305359.1" FT mRNA join(AL391845.49:115229..115364,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9729) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-018" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DC320083.1 Em:DC328574.1" FT mRNA join(AL391845.49:122233..122445,2066701..2066786, FT AL590822.36:3076..3207,AL590822.36:4893..4974, FT AL590822.36:7738..7790,AL590822.36:9656..9802) FT /gene="PRKCZ" FT /locus_tag="RP11-181G12.1-019" FT /product="protein kinase C, zeta" FT /note="match: ESTs: Em:DA083551.1 Em:DC305005.1" FT misc_feature 2069907..2074486 FT /note="annotated region of clone" FT misc_feature 2070487 FT /note="Clone_left_end: RP11-181G12" FT misc_feature 2252410..2273927 FT /note="annotated region of clone" FT polyA_site complement(2252692) FT polyA_signal complement(2252709..2252714) FT misc_feature 2269928 FT /note="Clone_left_end: RP4-740C4" FT mRNA join(AL513477.21:55108..55357,AL513477.21:56819..56890, FT AL513477.21:58478..58576,AL513477.21:59286..59396, FT AL513477.21:60918..61008,AL513477.21:61750..61837, FT AL513477.21:72258..72354,AL513477.21:74224..74334, FT AL513477.21:88100..88223,AL513477.21:89217..89383, FT complement(2268156..2268289),complement(2267908..2267987), FT complement(2255536..2255582),complement(2252692..2253018)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-001" FT /product="MORN repeat containing 1" FT /note="match: cDNAs: Em:AK024003.1" FT /note="match: ESTs: Em:AI674190.1 Em:AI682556.1" FT CDS join(AL513477.21:55282..55357,AL513477.21:56819..56890, FT AL513477.21:58478..58576,AL513477.21:59286..59396, FT AL513477.21:60918..61008,AL513477.21:61750..61837, FT AL513477.21:72258..72354,AL513477.21:74224..74334, FT AL513477.21:88100..88223,AL513477.21:89217..89383, FT complement(2268156..2268289),complement(2267908..2267987), FT complement(2255536..2255582),complement(2252822..2253018)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-001" FT /standard_name="OTTHUMP00000001498" FT /product="MORN repeat containing 1" FT /protein_id="CAI22504.1" FT /translation="MAAAGEGTPSSRGPRRDPPRRPPRNGYGVYVYPNSFFRYEGEWKA FT GRKHGHGKLLFKDGSYYEGAFVDGEITGEGRRHWAWSGDTFSGQFVLGEPQGYGVMEYK FT AGGCYEGEVSHGMREGHGFLVDRDGQVYQGSFHDNKRHGPGQMLFQNGDKYDGDWVRDR FT RQGHGVLRCADGSTYKGQWHSDVFSGLGSMAHCSGVTYYGLWINGHPAEQATRIVILGP FT EVMEVAQGSPFSVNVQLLQDHGEIAKSESGRVLQISAGVRYVQLSAYSEVNFFKVDRDN FT QETLIQTPFGFECIPYPVSSPAAGVPGPRAAKGGAEADVPLPRGDLELHLGALHGQEDT FT PGGLLARGHAPHCPGACQRVEQGCAEFTDVLLGPPPPGYHPFLFLDSLHKKAGGRSRGG FT LHPRGTPPTAQEPPGGSRPEGRATEEQAAAAHLGEYVLMIRDVTTPPFLGRRLPPAFKH FT LRVVAKRAGQPPHVLEEGPEASSSWQAAHSCTPEPPAPR" FT misc_feature complement(2273928..2378253) FT /note="annotated region of clone" FT mRNA join(2357419..2357476,2361777..2362089) FT /locus_tag="RP4-740C4.4-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK122591.1" FT mRNA complement(join(2336236..2337273,2337923..2338058, FT 2338159..2338394,2339891..2340297,2341810..2341890, FT 2343830..2343974)) FT /gene="PEX10" FT /locus_tag="RP4-740C4.3-001" FT /product="peroxisomal biogenesis factor 10" FT /note="match: cDNAs: Em:AB013818.1 Em:AK124816.1 FT Em:BC018198.1" FT CDS complement(join(2337205..2337273,2337923..2338058, FT 2338159..2338394,2339891..2340297,2341810..2341890, FT 2343830..2343941)) FT /gene="PEX10" FT /locus_tag="RP4-740C4.3-001" FT /standard_name="OTTHUMP00000001658" FT /product="peroxisomal biogenesis factor 10" FT /note="match: proteins: Sw:O60683 Sw:Q8HXW8" FT /protein_id="CAI22603.1" FT /translation="MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEW FT RKEVELLSDVAYFGLTTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVLPY FT LLDKALLPLEQELQADPDSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRALLRA FT VFVLRQGLACLQRLHVAWFYIHGVFYHLAKRLTGITYQALRPDPLRVLMSVAPSALQLR FT VRSLPGEDLRARVSYRLLGVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRAS FT LEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLI FT YLRHYR" FT polyA_signal complement(2336273..2336278) FT polyA_site complement(2336241) FT polyA_site 2335190 FT polyA_signal 2335168..2335173 FT misc_feature complement(2334783) FT /note="Clone_left_end: RP4-713A8" FT mRNA join(2333390..2333781,2334474..2334666) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-007" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT misc_feature complement(2328656..2328889) FT /note="Sequence confirmed by (AC025624) sequenced by WIBR" FT CDS join(2327230..2327310,2328555..2328659,2330854..2330953, FT 2332296..2332374,2333646..2333781,2334474..2334563) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-001" FT /standard_name="OTTHUMP00000001502" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /note="match: proteins: Sw:O15258 Sw:Q9CQU3 Tr:Q5T094 FT Tr:Q9P0H9" FT /protein_id="CAI22604.1" FT /translation="MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWV FT VTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTK FT QNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMK FT RQIKHMIKYRYIPFTHGKRRYRGKEDAGKAFAS" FT mRNA join(2325444..2327310,2328555..2328659,2330854..2330953, FT 2332296..2332374,2333646..2333781,2334474..2334655) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-003" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT CDS join(2327230..2327310,2328555..2328659,2332296..2332374, FT 2333646..2333734) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-004" FT /standard_name="OTTHUMP00000039098" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /protein_id="CAI22605.1" FT /translation="MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWV FT VTLGLSFVYMIRVYLLQMTVLRYPPNRTRNSAPSFEGSQSLNFGMRLPRASLWLWSVLS FT STLSTSRCSGRFW" FT CDS join(2327230..2327310,2328555..2328659,2330854..2330953, FT 2332296..2332374,2333646..>2333755) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-006" FT /standard_name="OTTHUMP00000039099" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /protein_id="CAI22606.1" FT /translation="MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWV FT VTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTK FT QNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLF" FT CDS join(2327230..2327310,2328555..2328659,2330854..2330953, FT 2332296..2332374,2333536..2333734) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-002" FT /standard_name="OTTHUMP00000001503" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /protein_id="CAI22607.1" FT /translation="MSEGDSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWV FT VTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTK FT QNEEFRPFIRRLPEFKFWDASVCGDGRCSCKAGGGRQVPGAGCRCGANLLSPLEGMRLP FT RASLWLWSVLSSTLSTSRCSGRFW" FT misc_feature complement(2325588) FT /note="Clone_right_end: RP11-361M21" FT mRNA join(2324613..2324670,2327223..2327310,2328555..2328659, FT 2330854..2330953,2332296..2332374,2333646..>2333755) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-006" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /note="match: ESTs: Em:BQ638844.1" FT mRNA join(2323272..2323397,2327223..2327310,2328555..2328659, FT 2330854..2330953,2332296..2332374,2333646..2333781, FT 2334474..2335190) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-001" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /note="match: cDNAs: Em:AF157324.1 Em:AK003682.1 FT Em:AK078396.1 Em:BC004965.1" FT mRNA join(2323329..2323397,2327223..2327310,2328555..2328659, FT 2330854..2330953,2332296..2332374,2333536..2333781, FT 2334474..2335190) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-002" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /note="match: cDNAs: Em:AF091071.1" FT mRNA join(2323267..2323397,2327223..2327310,2328555..2328659, FT 2332296..2332374,2333646..2333764) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-004" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /note="match: ESTs: Em:BM827017.1" FT mRNA join(2323296..2323397,2327223..2327806) FT /gene="RER1" FT /locus_tag="RP4-740C4.2-005" FT /product="RER1 retention in endoplasmic reticulum 1 homolog FT (S. cerevisiae)" FT /note="match: ESTs: Em:BE794946.1" FT mRNA complement(join(AL589739.8:2283..2609, FT AL589739.8:5127..5173,AL589739.8:17499..17578, FT AL589739.8:17747..17880,2288871..2289037,2290031..2290154, FT 2303920..2304030,2305900..2305996,2316417..2316504, FT 2317246..2317336,2318858..2318968,2319678..2319776, FT 2321364..2321435,2322897..2323146)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-001" FT /product="MORN repeat containing 1" FT /note="match: cDNAs: Em:AK024003.1" FT /note="match: ESTs: Em:AI674190.1 Em:AI682556.1" FT mRNA complement(join(2286616..2286903,2288871..2289037, FT 2290031..2290154,2303920..2304030,2305900..2305996, FT 2316417..2316504,2317246..2317336,2318858..2318968, FT 2319678..2319776,2321364..2321435,2322897..2323146)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-002" FT /product="MORN repeat containing 1" FT /note="match: cDNAs: Em:BC021704.1 Em:BC021704.2" FT CDS complement(join(AL589739.8:2413..2609, FT AL589739.8:5127..5173,AL589739.8:17499..17578, FT AL589739.8:17747..17880,2288871..2289037,2290031..2290154, FT 2303920..2304030,2305900..2305996,2316417..2316504, FT 2317246..2317336,2318858..2318968,2319678..2319776, FT 2321364..2321435,2322897..2322972)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-001" FT /standard_name="OTTHUMP00000001498" FT /product="MORN repeat containing 1" FT /protein_id="CAI22608.1" FT /translation="MAAAGEGTPSSRGPRRDPPRRPPRNGYGVYVYPNSFFRYEGEWKA FT GRKHGHGKLLFKDGSYYEGAFVDGEITGEGRRHWAWSGDTFSGQFVLGEPQGYGVMEYK FT AGGCYEGEVSHGMREGHGFLVDRDGQVYQGSFHDNKRHGPGQMLFQNGDKYDGDWVRDR FT RQGHGVLRCADGSTYKGQWHSDVFSGLGSMAHCSGVTYYGLWINGHPAEQATRIVILGP FT EVMEVAQGSPFSVNVQLLQDHGEIAKSESGRVLQISAGVRYVQLSAYSEVNFFKVDRDN FT QETLIQTPFGFECIPYPVSSPAAGVPGPRAAKGGAEADVPLPRGDLELHLGALHGQEDT FT PGGLLARGHAPHCPGACQRVEQGCAEFTDVLLGPPPPGYHPFLFLDSLHKKAGGRSRGG FT LHPRGTPPTAQEPPGGSRPEGRATEEQAAAAHLGEYVLMIRDVTTPPFLGRRLPPAFKH FT LRVVAKRAGQPPHVLEEGPEASSSWQAAHSCTPEPPAPR" FT CDS complement(join(2286887..2286903,2288871..2289037, FT 2290031..2290154,2303920..2304030,2305900..2305996, FT 2316417..2316504,2317246..2317336,2318858..2318968, FT 2319678..2319776,2321364..2321435,2322897..2322972)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-002" FT /standard_name="OTTHUMP00000001499" FT /product="MORN repeat containing 1" FT /protein_id="CAI22609.1" FT /translation="MAAAGEGTPSSRGPRRDPPRRPPRNGYGVYVYPNSFFRYEGEWKA FT GRKHGHGKLLFKDGSYYEGAFVDGEITGEGRRHWAWSGDTFSGQFVLGEPQGYGVMEYK FT AGGCYEGEVSHGMREGHGFLVDRDGQVYQGSFHDNKRHGPGQMLFQNGDKYDGDWVRDR FT RQGHGVLRCADGSTYKGQWHSDVFSGLGSMAHCSGVTYYGLWINGHPAEQATRIVILGP FT EVMEVAQGSPFSVNVQLLQDHGEIAKSESGRVLQISAGVRYVQLSAYSEVNFFKVDRDN FT QETLIQTPFGFECIPYPVSSPAAGVPGPRAAKGGAEADVPLPRGDLELHLGALHGQEDT FT PGGLLGSSLF" FT mRNA complement(join(2319466..2319776,2321364..2321435)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-006" FT /product="MORN repeat containing 1" FT /note="match: ESTs: Em:AI458216.1 Em:AI701834.1 FT Em:BE503006.1 Em:BE644753.1 Em:BE670312.1 Em:BE670342.1 FT Em:BG055482.1" FT CDS complement(join(2310498..2310666,2316417..2316504, FT 2317246..2317336,2318858..2318968,2319678..>2319776)) FT /codon_start=1 FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-004" FT /standard_name="OTTHUMP00000001500" FT /product="MORN repeat containing 1" FT /protein_id="CAI22610.1" FT /translation="VTGSCYLKMAVITKGRLWTERSREKAAGTGPGQETPSLDSLFWES FT LKATASWSTKPADVMKGRSPTACGKDTGFWWTGMDKCTRAPSMTTRGTALGRCSFRTVT FT STTATGSGTGVRDTGCCAAPTAPPTSSDPPIYSRRNSRRHRLLPRHHELRVGEAPPGDL FT FSLSTAGVFSANRVSCLAASIP" FT mRNA complement(join(2310430..2310666,2316417..2316504, FT 2317246..2317336,2318858..2318968,2319678..>2319776)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-004" FT /product="MORN repeat containing 1" FT /note="match: ESTs: Em:BX104597.1" FT mRNA complement(join(2318495..2318968,2319678..2319755)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-003" FT /product="MORN repeat containing 1" FT /note="match: ESTs: Em:BF437812.1" FT misc_feature complement(2319375..2319485) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature complement(2319374) FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 450bp by restriction digest data" FT misc_feature complement(2319346..2319373) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(2302604..2304030,2305900..2305996, FT 2316417..2316597,2317246..2317336,2318858..2318968)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-007" FT /product="MORN repeat containing 1" FT /note="match: cDNAs: Em:BC063141.1" FT CDS complement(join(2303241..2303344,2303920..2304030, FT 2305900..2305996,2316417..>2316560)) FT /codon_start=1 FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-005" FT /standard_name="OTTHUMP00000001501" FT /product="MORN repeat containing 1" FT /protein_id="CAI22611.1" FT /translation="TATTRLPLLRVDSVRVSPRNGDKYDGDWVRDRRQGHGVLRCADGS FT TYKGQWHSDVFSGLGSMAHCSGVTYYGLWINGHPAEQATRIVILGPEVMEVAQGSPFSV FT NVQLLQDHGEIAKNGVSLLLSRLECSGAMSALRNLRLPRSSDSALAS" FT mRNA complement(join(2303115..2303344,2303920..2304030, FT 2305900..2305996,2316417..>2316560)) FT /gene="MORN1" FT /locus_tag="RP4-740C4.1-005" FT /product="MORN repeat containing 1" FT /note="match: ESTs: Em:CB154500.1" FT misc_feature complement(2284614..2284743) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature complement(2284258..2284321) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT CDS complement(2283095..2283298) FT /pseudo FT /locus_tag="RP4-740C4.5-001" FT /product="small nuclear ribonucleoprotein N (SNRPN) FT pseudogene" FT /note="match: proteins: Sw:P14678 Sw:P27048 Sw:P63164 FT Tr:O70499 Tr:Q15182 Tr:Q63747 Tr:Q8AVT2 Tr:Q9N1Q0" FT polyA_signal complement(2281870..2281875) FT polyA_site complement(2281853) FT misc_feature complement(2277144..2277155) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature complement(2273928) FT /note="Clone_left_end: RP4-740C4" FT misc_feature 2380250..2532985 FT /note="annotated region of clone" FT CDS complement(join(2522429..2522528,2522996..2523072, FT 2523371..2523466,2524094..2524159,2524272..2524405, FT 2525253..2525372,2525824..2525882,2526229..2526332, FT 2526715..2526798,2527448..2527546,2528000..2528128, FT 2529646..2529739,2530093..2530229,AL589746.11:2438..2527, FT AL589746.11:2701..2835,AL589746.11:4112..4177, FT AL589746.11:4802..4920,AL589746.11:5528..5623, FT AL589746.11:7893..7973,AL589746.11:8224..8385, FT AL589746.11:9835..9894,AL589746.11:10681..10758, FT AL831784.17:5975..6128)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-001" FT /standard_name="OTTHUMP00000000967" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: proteins: Sw:Q495T6 Sw:Q9JLI3" FT /protein_id="CAX30814.1" FT /translation="MGKSEGPVGMVESAGRAGQKRPGFLEGGLLLLLLLVTAALVALGV FT LYADRRGKQLPRLASRLCFLQEERTFVKRKPRGIPEAQEVSEVCTTPGCVIAAARILQN FT MDPTTEPCDDFYQFACGGWLRRHVIPETNSRYSIFDVLRDELEVILKAVLENSTAKDRP FT AVEKARTLYRSCMNQSVIEKRGSQPLLDILEVVGGWPVAMDRWNETVGLEWELERQLAL FT MNSQFNRRVLIDLFIWNDDQNSSRHIIYIDQPTLGMPSREYYFNGGSNRKVREAYLQFM FT VSVATLLREDANLPRDSCLVQEDMVQVLELETQLAKATVPQEERHDVIALYHRMGLEEL FT QSQFGLKGFNWTLFIQTVLSSVKIKLLPDEEVVVYGIPYLQNLENIIDTYSARTIQNYL FT VWRLVLDRIGSLSQRFKDTRVNYRKALFGTMVEEVRWRECVGYVNSNMENAVGSLYVRE FT AFPGDSKSMVRELIDKVRTVFVETLDELGWMDEESKKKAQEKAMSIREQIGHPDYILEE FT MNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLREKVDPNLWIIGAAVVNAFYS FT PNRNQIVFPAGILQPPFFSKEQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMMDW FT WSNFSTQHFREQSECMIYQYGNYSWDLADEQNVNGFNTLGENIADNGGVRQAYKAYLKW FT MAEGGKDQQLPGLDLTHEQLFFINYAQVWCGSYRPEFAIQSIKTDVHSPLKYRVLGSLQ FT NLAAFADTFHCARGTPMHPKERCRVW" FT mRNA complement(join(2522082..2522528,2522996..2523072, FT 2523371..2523466,2524094..2524159,2524272..2524405, FT 2525253..2525372,2525824..2525882,2526229..2526332, FT 2526715..2526798,2527448..2527546,2528000..2528128, FT 2529646..2529739,2530093..2530229,AL589746.11:2438..2527, FT AL589746.11:2701..2835,AL589746.11:4112..4177, FT AL589746.11:4802..4920,AL589746.11:5528..5623, FT AL589746.11:7893..7973,AL589746.11:8224..8385, FT AL589746.11:9835..9894,AL589746.11:10681..10758, FT AL831784.17:5975..6165,AL831784.17:9510..9634)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-001" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: cDNAs: Em:AF336981.1 Em:AK093058.1 FT Em:AX747891.1" FT mRNA join(2398927..2399101,2409915..2410061,2411173..2411391) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-008" FT /product="phospholipase C, eta 2" FT /note="match: ESTs: Em:BU178908.1" FT mRNA join(2407799..2408151,2409915..2410061,2411173..2411415, FT 2411621..2411751,2415887..2416057,2418346..2418439, FT 2418612..2418815,2419037..2419157,2420646..2420817, FT 2421199..2421306,2427732..2428143,2428267..2428449, FT 2428941..2429048,2429962..2430086,2430183..2430267, FT 2430523..2430669,2431080..2431159,2433551..2434349, FT 2435056..2435082,2435361..2436272) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-004" FT /product="phospholipase C, eta 2" FT /note="match: cDNAs: Em:AK044619.1 Em:AK049970.1 FT Em:AK078731.1" FT mRNA join(2409915..2410061,2411173..2411252,2430192..2430267, FT 2430523..2430669,2431080..2431159,2433551..2436969) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-003" FT /product="phospholipase C, eta 2" FT /note="match: cDNAs: Em:AK122591.1" FT CDS join(2409926..2410061,2411173..2411252,2430192..2430267, FT 2430523..2430669,2431080..2431159,2433551..2434525) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-003" FT /standard_name="OTTHUMP00000000792" FT /product="phospholipase C, eta 2" FT /note="match: proteins: Tr:Q86YU7" FT /protein_id="CAX30815.1" FT /translation="MGAMQEGMQMVKLRGGSKGLVRFYYLDEHRSCIRWRPSRKNEKAK FT ISIDSIQEVSEGRQSEVFQRYPDGSFDPFVEVEIIGLPVDCSREQTRVVDDNGFNPTWE FT ETLVFMVHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSMMPGYRHVYLEGMEEASIFV FT HVAVSDISGKVKQALGLKGLFLRGPKPGSLDSHAAGRPPARPSVSQRILRRTASAPTKS FT QKPGRRGFPELVLGTRDTGSKGVADDVVPPGPGPAPEAPAQEGPGSGSPRGKAPAAVAE FT KSPVRVRPPRVLDGPGPAGMAATCMKCVVGSCAGVNTGGLQRERPPSPGPASRQAAIRQ FT QPRARADSLGAPCCGLDPHAIPGRSREAPKGPGAWRQGPGGSGSMSSDSSSPDSPGIPE FT RSPRWPEGACRQPGALQGEMSALFAQKLEEIRSKSPMFSAGKPLLPCVVLPHAPGMAGP FT GSPAAASAWTVSPRVLVLVALYPWHCLRGTLLPWLACGP" FT mRNA join(2410529..2411415,2411621..2411751,2415887..2416057, FT 2418346..2418439,2418612..2418815,2419037..2419157, FT 2420646..2420817,2421199..2421306,2422631..2422774, FT 2426295..2426387,2426927..2427009,2428046..2428143, FT 2428267..2428449,2428941..2429048,2429962..2430086, FT 2430183..2430267,2430523..2430669,2431080..2431159, FT 2433551..2436969) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-001" FT /product="phospholipase C, eta 2" FT /note="match: cDNAs: Em:AK074149.1 Em:AK122589.1" FT mRNA join(2411327..2411415,2411620..2411751,2415887..2416057, FT 2418346..2418439,2418612..2418815,2419037..2419157, FT 2420646..2420817,2421199..2421306,2422631..2422774, FT 2426295..2426387,2426927..2427009,2428046..2428143, FT 2428267..2428449,2429962..2430086,2430183..2430267, FT 2430523..2430669,2431080..2431159,2433551..2433848, FT 2435361..2436964) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-002" FT /product="phospholipase C, eta 2" FT /note="match: cDNAs: Em:BC043358.1" FT CDS join(2411361..2411415,2411621..2411751,2415887..2416057, FT 2418346..2418439,2418612..2418815,2419037..2419157, FT 2420646..2420817,2421199..2421306,2422631..2422774, FT 2426295..2426387,2426927..2427009,2428046..2428143, FT 2428267..2428449,2428941..2429048,2429962..2430086, FT 2430183..2430267,2430523..2430669,2431080..2431159, FT 2433551..2434525) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-001" FT /standard_name="OTTHUMP00000000790" FT /product="phospholipase C, eta 2" FT /note="match: proteins: Tr:Q86YU9 Tr:Q8TEH5" FT /protein_id="CAX30816.1" FT /translation="MAGISDEDSLARRQRTRDQWLKQTFDEADKNGDGSLSIGEVLQLL FT HKLNVNLPRQRVKQMFREADTDDHQGTLGFEEFCAFYKMMSTRRDLYLLMLTYSNHKDH FT LDAASLQRFLQVEQKMAGVTLESCQDIIEQFEPCPENKSKGLLGIDGFTNYTRSPAGDI FT FNPEHHHVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRCVEVDCW FT DGPDGEPIVHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVIQQKKMAQY FT LTDILGDKLDLSSVSSEDATTLPSPQMLKGKILVKGKKLPANISEDAEEGEVSDEDSAD FT EIDDDCKLLNGDASTNRKRVENTAKRKLDSLIKESKIRDCEDPNNFSVSTLSPSGKLGR FT KSKAEEDVESGEDAGASRRNGRLVVGSFSRRKKKGSKLKKAASVEEGDEGQDSPGGQSR FT GATRQKKTMKLSRALSDLVKYTKSVATHDIEMEAASSWQVSSFSETKAHQILQQKPAQY FT LRFNQQQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQLNRAKFSANGG FT CGYVLKPGCMCQGVFNPNSEDPLPGQLKKQLVLRIISGQQLPKPRDSMLGDRGEIIDPF FT VEVEIIGLPVDCSREQTRVVDDNGFNPTWEETLVFMVHMPEIALVRFLVWDHDPIGRDF FT IGQRTLAFSSMMPGYRHVYLEGMEEASIFVHVAVSDISGKVKQALGLKGLFLRGPKPGS FT LDSHAAGRPPARPSVSQRILRRTASAPTKSQKPGRRGFPELVLGTRDTGSKGVADDVVP FT PGPGPAPEAPAQEGPGSGSPRGKAPAAVAEKSPVRVRPPRVLDGPGPAGMAATCMKCVV FT GSCAGVNTGGLQRERPPSPGPASRQAAIRQQPRARADSLGAPCCGLDPHAIPGRSREAP FT KGPGAWRQGPGGSGSMSSDSSSPDSPGIPERSPRWPEGACRQPGALQGEMSALFAQKLE FT EIRSKSPMFSAGKPLLPCVVLPHAPGMAGPGSPAAASAWTVSPRVLVLVALYPWHCLRG FT TLLPWLACGP" FT CDS join(2411743..2411751,2415887..2416057,2418346..2418439, FT 2418612..2418815,2419037..2419157,2420646..2420817, FT 2421199..2421306,2422631..2422774,2426295..2426387, FT 2426927..2427009,2428046..2428143,2428267..2428449, FT 2429962..2430086,2430183..2430267,2430523..2430669, FT 2431080..2431159,2433551..2433848,2435361..2436652) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-002" FT /standard_name="OTTHUMP00000000791" FT /product="phospholipase C, eta 2" FT /note="match: proteins: Tr:Q86XJ2" FT /protein_id="CAX30817.1" FT /translation="MFREADTDDHQGTLGFEEFCAFYKMMSTRRDLYLLMLTYSNHKDH FT LDAASLQRFLQVEQKMAGVTLESCQDIIEQFEPCPENKSKGLLGIDGFTNYTRSPAGDI FT FNPEHHHVHQDMTQPLSHYFITSSHNTYLVGDQLMSQSRVDMYAWVLQAGCRCVEVDCW FT DGPDGEPIVHHGYTLTSKILFKDVIETINKYAFIKNEYPVILSIENHCSVIQQKKMAQY FT LTDILGDKLDLSSVSSEDATTLPSPQMLKGKILVKGKKLPANISEDAEEGEVSDEDSAD FT EIDDDCKLLNGDASTNRKRVENTAKRKLDSLIKESKIRDCEDPNNFSVSTLSPSGKLGR FT KSKAEEDVESGEDAGASRRNGRLVVGSFSRRKKKGSKLKKAASVEEGDEGQDSPGGQSR FT GATRQKKTMKLSRALSDLVKYTKSVATHDIEMEAASSWQVSSFSETKAHQILQQKPAQY FT LRFNQQQLSRIYPSSYRVDSSNYNPQPFWNAGCQMGVFNPNSEDPLPGQLKKQLVLRII FT SGQQLPKPRDSMLGDRGEIIDPFVEVEIIGLPVDCSREQTRVVDDNGFNPTWEETLVFM FT VHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSMMPGYRHVYLEGMEEASIFVHVAVSD FT ISGKVKQALGLKGLFLRGPKPGSLDSHAAGRPPARPSVSQRILRRTASAPTKSQKPGRR FT GFPELVLGTRDTGSKGVADDVVPPGPGPAPEAPAQEGPGSGSPRDTRPLSTQRPLPPLC FT SLETIAEEPAPGPGPPPPAAVPTSSSQGRPPYPTGPGANVASPLEDTEEPRDSRPRPCN FT GEGAGGAYERAPGSQTDGRSQPRTLGHLPVIRRVKSEGQVPTEPLGGWRPLAAPFPAPA FT VYSDATGSDPLWQRLEPCGHRDSVSSSSSMSSSDTVIDLSLPSLGLGRSRENLAGAHMG FT RLPPRPHSASAARPDLPPVTKSKSNPNLRATGQRPPIPDELQPRSLAPRMAGLPFRPPW FT GCLSLVGVQDCPVAAKSKSLGDLTADDFAPSFEGGSRRLSHSLGLPGGTRRVSGPGVRR FT DTLTEQLRWLTVFQQAGDITSPTSLGPAGEGVAGGPGFVRRSSSRSHSRVRAIASRARQ FT AQERQQRLQGLGRQGPPEEERGTPEGACSVGHEGSVDAPAPSKGALGPASAAAENLVLL FT RL" FT polyA_site complement(2423739) FT mRNA complement(join(2423739..2424035,2424540..2424697)) FT /locus_tag="RP3-395M20.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BU733111.1" FT mRNA complement(join(2424876..2425292,2425822..2425918)) FT /locus_tag="RP3-395M20.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM694243.1" FT CDS join(<2428941..2429048,2429962..2430086,2430183..2430267, FT 2430523..2430669,2431080..2431159,2433551..2433848, FT 2435361..2436652) FT /codon_start=3 FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-007" FT /standard_name="OTTHUMP00000000793" FT /product="phospholipase C, eta 2" FT /protein_id="CAX30818.1" FT /translation="ALNYQSEGRMLQLNRAKFSANGGCGYVLKPGCMCQGVFNPNSEDP FT LPGQLKKQLVLRIISGQQLPKPRDSMLGDRGEIIDPFVEVEIIGLPVDCSREQTRVVDD FT NGFNPTWEETLVFMVHMPEIALVRFLVWDHDPIGRDFIGQRTLAFSSMMPGYRHVYLEG FT MEEASIFVHVAVSDISGKVKQALGLKGLFLRGPKPGSLDSHAAGRPPARPSVSQRILRR FT TASAPTKSQKPGRRGFPELVLGTRDTGSKGVADDVVPPGPGPAPEAPAQEGPGSGSPRD FT TRPLSTQRPLPPLCSLETIAEEPAPGPGPPPPAAVPTSSSQGRPPYPTGPGANVASPLE FT DTEEPRDSRPRPCNGEGAGGAYERAPGSQTDGRSQPRTLGHLPVIRRVKSEGQVPTEPL FT GGWRPLAAPFPAPAVYSDATGSDPLWQRLEPCGHRDSVSSSSSMSSSDTVIDLSLPSLG FT LGRSRENLAGAHMGRLPPRPHSASAARPDLPPVTKSKSNPNLRATGQRPPIPDELQPRS FT LAPRMAGLPFRPPWGCLSLVGVQDCPVAAKSKSLGDLTADDFAPSFEGGSRRLSHSLGL FT PGGTRRVSGPGVRRDTLTEQLRWLTVFQQAGDITSPTSLGPAGEGVAGGPGFVRRSSSR FT SHSRVRAIASRARQAQERQQRLQGLGRQGPPEEERGTPEGACSVGHEGSVDAPAPSKGA FT LGPASAAAENLVLLRL" FT mRNA join(<2428941..2429048,2429962..2430086,2430183..2430267, FT 2430523..2430669,2431080..2431159,2433551..2433848, FT 2435361..2436966) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-007" FT /product="phospholipase C, eta 2" FT /note="match: cDNAs: Em:BC019679.1 Em:BC050037.1" FT mRNA join(2429221..2430086,2430183..2430267,2430523..2430669, FT 2431080..2436967) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-005" FT /product="phospholipase C, eta 2" FT /note="match: cDNAs: Em:AB007919.1" FT mRNA join(2430086..2430267,2430523..2430669,2431080..2431159, FT 2433551..2433848,2435056..2435082,2435361..2436967) FT /gene="PLCH2" FT /locus_tag="RP3-395M20.1-006" FT /product="phospholipase C, eta 2" FT /note="match: cDNAs: Em:BC037356.1 Em:BC044630.1" FT polyA_signal 2436945..2436950 FT polyA_site 2436967 FT polyA_site complement(2439972) FT polyA_site complement(2439976) FT mRNA complement(join(2441732..2442221,2442777..2442826, FT 2443067..2443122,2444327..2444452)) FT /gene="PANK4" FT /locus_tag="RP3-395M20.4-003" FT /product="pantothenate kinase 4" FT /note="match: ESTs: Em:CB960239.1 Em:CB989859.1" FT mRNA complement(join(2443845..2444478,2445441..2445524)) FT /gene="PANK4" FT /locus_tag="RP3-395M20.4-002" FT /product="pantothenate kinase 4" FT /note="match: ESTs: Em:AA286834.1 Em:AA648809.1 FT Em:AI927082.1" FT mRNA complement(join(2445795..2445905,2446697..2446840, FT 2447001..2447156,2449603..2449703,2449955..2450036, FT 2450582..2450734)) FT /gene="PANK4" FT /locus_tag="RP3-395M20.4-004" FT /product="pantothenate kinase 4" FT /note="match: ESTs: Em:BQ221069.1" FT mRNA complement(join(2452700..2452754,2453157..2453239, FT 2457040..2457626)) FT /gene="PANK4" FT /locus_tag="RP3-395M20.4-006" FT /product="pantothenate kinase 4" FT /note="match: ESTs: Em:BG723264.1" FT mRNA complement(join(2439972..2440499,2441301..2441369, FT 2441496..2441596,2442117..2442221,2442777..2442826, FT 2443067..2443122,2444327..2444478,2445441..2445528, FT 2445793..2445905,2447001..2447156,2449603..2449703, FT 2449955..2450036,2450582..2450763,2451240..2451393, FT 2451761..2451853,2452162..2452345,2452540..2452754, FT 2453157..2453239,2457903..2458039)) FT /gene="PANK4" FT /locus_tag="RP3-395M20.4-001" FT /product="pantothenate kinase 4" FT /note="match: cDNAs: Em:AK001644.1 Em:AL442072.1 FT Em:BC043496.1" FT CDS complement(join(2440286..2440499,2441301..2441369, FT 2441496..2441596,2442117..2442221,2442777..2442826, FT 2443067..2443122,2444327..2444478,2445441..2445528, FT 2445793..2445905,2447001..2447156,2449603..2449703, FT 2449955..2450036,2450582..2450763,2451240..2451393, FT 2451761..2451853,2452162..2452345,2452540..2452754, FT 2453157..2453239,2457903..2458026)) FT /gene="PANK4" FT /locus_tag="RP3-395M20.4-001" FT /standard_name="OTTHUMP00000000865" FT /product="pantothenate kinase 4" FT /note="match: proteins: Sw:Q80YV4 Sw:Q923S8 Sw:Q9NVE7" FT /protein_id="CAX30819.1" FT /translation="MAECGASGSGSSGDSLDKSITLPPDEIFRNLENAKRFAIDIGGSL FT TKLAYYSTVQHKVAKVRSFDHSGKDTEREHEPPYEISVQEEITARLHFIKFENTYIEAC FT LDFIKDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKVDKEDVMTCLIKGCNFVLKNIP FT HEAFVYQKDSDPEFRFQTNHPHIFPYLLVNIGSGVSIVKVETEDRFEWVGGSSIGGGTF FT WGLGALLTKTKKFDELLHLASRGQHSNVDMLVRDVYGGAHQTLGLSGNLIASSFGKSAT FT ADQEFSKEDMAKSLLHMISNDIGQLACLHARLHSLDRVYFGGFFIRGHPVTMRTITYSI FT NFFSKGEVQALFLRHEGYLGAIGAFLKGAEQDNPNQYSWGENYAGSSGLMSASPELGPA FT QRARSGTFDLLEMDRLERPLVDLPLLLDPPSYVPDTVDLTDDALARKYWLTCFEEALDG FT VVKRAVASQPDSVDAAERAEKFRQKYWNKLQTLRQQPFAYGTLTVRSLLDTREHCLNEF FT NFPDPYSKVKQRENGVALRCFPGVVRSLDALGWEERQLALVKGLLAGNVFDWGAKAVSA FT VLESDPYFGFEEAKRKLQERPWLVDSYSEWLQRLKGPPHKCALIFADNSGIDIILGVFP FT FVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLLLVQTG FT SSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWL FT AERLGGRLFSVIFKYEVPAE" FT mRNA complement(join(2450643..2450763,2451240..2451393, FT 2451761..2451853,2452162..2452345,2452540..2452754, FT 2457903..2458014)) FT /gene="PANK4" FT /locus_tag="RP3-395M20.4-005" FT /product="pantothenate kinase 4" FT /note="match: ESTs: Em:BX345091.1" FT polyA_site complement(2460184) FT polyA_signal complement(2460205..2460210) FT mRNA complement(join(2460184..2461188,2461285..2461450, FT 2461550..2461684)) FT /gene="HES5" FT /locus_tag="RP3-395M20.5-001" FT /product="hairy and enhancer of split 5 (Drosophila)" FT /note="match: cDNAs: Em:AK078170.1 Em:AK087508.1" FT /note="match: ESTs: Em:AW071837.1 Em:AW136641.1 FT Em:BU741484.1 Em:CD672133.1 Em:CD672134.1" FT CDS complement(join(2460908..2461188,2461285..2461450, FT 2461550..2461603)) FT /gene="HES5" FT /locus_tag="RP3-395M20.5-001" FT /standard_name="OTTHUMP00000000867" FT /product="hairy and enhancer of split 5 (Drosophila)" FT /note="match: proteins: Sw:P70120 Sw:Q03062 Tr:P70120" FT /protein_id="CAX30820.1" FT /translation="MAPSTVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQ FT EFARHQPNSKLEKADILEMAVSYLKHSKAFVAAAGPKSLHQDYSEGYSWCLQEAVQFLT FT LHAASDTQMKLLYHFQRPPAAPAAPAKEPKAPGAAPPPALSAKATAAAAAAHQPACGLW FT RPW" FT polyA_site complement(2481359) FT mRNA complement(2481359..2481713) FT /locus_tag="RP3-395M20.8-005_1" FT /product="novel transcript" FT /note="match: ESTs: Em:AW418953.1" FT polyA_site complement(2481722) FT polyA_signal complement(2481737..2481742) FT mRNA complement(join(2481359..2481713,2482012..2482170, FT 2482431..2483545)) FT /locus_tag="RP3-395M20.8-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK021767.1" FT mRNA complement(join(2481359..2481713,2482431..2482706)) FT /locus_tag="RP3-395M20.8-004" FT /product="novel transcript" FT mRNA complement(join(2481722..2482170,2482431..2485477)) FT /locus_tag="RP3-395M20.8-003_1" FT /product="novel transcript" FT mRNA complement(join(2482011..2482170,2482431..2482700, FT 2484530..2484614)) FT /locus_tag="RP3-395M20.8-006" FT /product="novel transcript" FT /note="match: ESTs: Em:AA290908.1" FT mRNA complement(join(2481359..2481558,2483214..2484142, FT 2485065..2485253)) FT /locus_tag="RP3-395M20.8-001_1" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK128532.1" FT mRNA complement(2485540..2485684) FT /locus_tag="RP3-395M20.7-004_2" FT /product="novel transcript" FT /note="match: ESTs: Em:AW418953.1" FT mRNA join(2487078..2487106,2488024..2488172,2489165..2489273, FT 2489782..2489907,2491262..2491417,2492063..>2492153) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-011" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:AA020847.1 Em:AA021617.1 FT Em:BX103478.1" FT mRNA join(2487230..2487289,2488024..2488172,2489165..2489273, FT 2489782..2489907,2491262..2491417,2492063..2492153, FT 2493112..>2493254) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-008" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BI761634.1" FT mRNA join(2487419..2487471,2488024..2488172,2489165..2489273, FT 2489782..2489907,2491262..2491417,2492063..2492153, FT 2493112..>2493254) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-006" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BG761765.1" FT mRNA join(2487419..2487691,2488024..2488172,2489165..2489273, FT 2489782..2489907,2491262..2491417,2492063..2492153, FT 2493112..>2493254) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-007" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BG763109.1 Em:BG766329.1 FT Em:BG766381.1 Em:BG769328.1 Em:BI767552.1 Em:DC410546.1" FT mRNA join(2487661..2487700,2488024..2488172,2489165..2489273, FT 2489782..2489907,2491262..2491417,2492063..2492153, FT 2492933..2493157) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-009" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BI767552.1" FT mRNA join(2487805..2488172,2489165..2489273,2489782..2489907, FT 2491262..2491417,2492063..2492153,2493112..2493254, FT 2494304..2494335,2494587..2495268) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-001" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: cDNAs: Em:AF147720.1 Em:AF153978.1 FT Em:AF373877.1 Em:AF373878.1 Em:BC002794.1 Em:BC002794.2 FT Em:BC018882.1 Em:BC018882.2 Em:U70321.1 Em:U81232.1" FT mRNA join(2487825..2487894,2490791..2491417,2492063..2492153, FT 2493112..2493254,2494304..2494335,2494587..2495268) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-002" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: cDNAs: Em:BC029848.1" FT mRNA join(2487844..2488172,2489165..2489272,2489782..2489907, FT 2490320..2490595) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-013" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BI762784.1" FT mRNA join(2487845..2488172,2489165..2489272,2489782..2490301) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-012" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:AL551467.2" FT mRNA join(2487996..2488172,2489165..2489273,2489782..2489907, FT 2491262..2491417,2492063..2492974) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-016" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT mRNA join(2488010..2488172,2489165..2489273,2489782..2491417, FT 2492063..2492153,2492933..2495188,2496129..2496796) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-015" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: cDNAs: Em:AB208808.1" FT CDS join(2488104..2488172,2489165..2489273,2489782..2489907, FT 2491262..2491417,2492063..>2492153) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-011" FT /standard_name="OTTHUMP00000204099" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /protein_id="CAX30821.1" FT /translation="MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPSCKED FT EYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMG FT LRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQ FT NCPPGTFSPNGTLEECQHQT" FT CDS join(2488104..2488172,2489165..2489273,2489782..2489907, FT 2491262..2491417,2492063..2492153,2492933..2492963) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-009" FT /standard_name="OTTHUMP00000204098" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /protein_id="CAX30822.1" FT /translation="MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPSCKED FT EYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMG FT LRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQ FT NCPPGTFSPNGTLEECQHQTNRAWKSQTDL" FT CDS join(2488104..2488172,2489165..2489273,2489782..2489907, FT 2491262..2491417,2492063..2492153,2493112..>2493254) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-006" FT /standard_name="OTTHUMP00000204095" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /protein_id="CAX30823.1" FT /translation="MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPSCKED FT EYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMG FT LRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQ FT NCPPGTFSPNGTLEECQHQTKCSWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLI FT ICVKRRKPR" FT CDS join(2488104..2488172,2489165..2489273,2489782..2489907, FT 2491262..2491417,2492063..2492153,2493112..2493254, FT 2494304..2494335,2494587..2494712) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-001" FT /standard_name="OTTHUMP00000000866" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: proteins: Sw:Q92956.3 Tr:Q8N634" FT /protein_id="CAX30824.1" FT /translation="MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPSCKED FT EYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMG FT LRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQ FT NCPPGTFSPNGTLEECQHQTKCSWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLI FT ICVKRRKPRGDVVKVIVSVQRKRQEAEGEATVIEALQAPPDVTTVAVEETIPSFTGRSP FT NH" FT mRNA complement(join(2485540..2485735,2486163..2488135, FT 2488416..2488450)) FT /locus_tag="RP3-395M20.7-001_1" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK128532.1" FT mRNA complement(join(2485680..2485735,2487120..2487308, FT 2487867..2488135,2488416..2488470)) FT /locus_tag="RP3-395M20.7-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BM837782.1" FT mRNA join(2489252..2489273,2489782..2491417,2492063..2492153, FT 2493112..2493254,2494304..2494335,2494587..2495265) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-003" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: cDNAs: Em:AK124010.1" FT mRNA join(2491019..2491417,2492063..2492153,2492933..2492981) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-010" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BM706892.1" FT mRNA join(2491993..2492153,2492933..2493254,2494304..2494335, FT 2494587..2494943) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-005" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BQ676022.1 Em:BQ676621.1 FT Em:BQ878755.1 Em:BU149430.1" FT mRNA join(2492121..2492153,2493216..2493254,2494304..2494335, FT 2496492..2496793,2496850..2497061) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-004" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BM675229.1" FT mRNA join(2493240..2493396,2494304..2494335,2494587..2494891) FT /gene="TNFRSF14" FT /locus_tag="RP3-395M20.6-014" FT /product="tumor necrosis factor receptor superfamily, FT member 14 (herpesvirus entry mediator)" FT /note="match: ESTs: Em:BU617532.1" FT polyA_site 2495268 FT polyA_signal 2497039..2497044 FT polyA_site 2497061 FT mRNA 2497849..2498044 FT /locus_tag="RP3-395M20.8-001_2" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK128532.1" FT mRNA 2497900..2498044 FT /locus_tag="RP3-395M20.8-005_2" FT /product="novel transcript" FT /note="match: ESTs: Em:AW418953.1" FT mRNA 2497995..2498105 FT /locus_tag="RP3-395M20.8-003_2" FT /product="novel transcript" FT mRNA join(2499305..2499493,2500416..2501327,2508612..2508811) FT /locus_tag="RP3-395M20.7-001_2" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK128532.1" FT mRNA join(2508053..2508159,2508457..2508811) FT /locus_tag="RP3-395M20.7-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AK021767.1" FT mRNA 2508457..2508811 FT /locus_tag="RP3-395M20.7-004_1" FT /product="novel transcript" FT /note="match: ESTs: Em:AW418953.1" FT polyA_site 2508811 FT mRNA join(2512999..2513089,2514809..2514934,2515564..2515972) FT /locus_tag="RP3-395M20.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF510112.1 Em:CA433641.1 FT Em:CB852498.1" FT polyA_site 2515972 FT mRNA join(2517930..2518030,2518530..2518734,2519180..2519231, FT 2519829..2519892,2519989..2520064,2520361..2520479, FT 2520849..2521071) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-006" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:BG745636.1 Em:BI908820.1" FT mRNA join(2517979..2518030,2518530..2518734,2519180..2519231, FT 2519829..2519892,2519989..2520064,2520393..2520479, FT 2520849..2521097) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-007" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:BI908668.1" FT mRNA join(2518237..2518312,2518613..2518734,2519180..2519231, FT 2519775..2519892,2519989..2520064,2520393..2520451) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-008" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:CB144367.1" FT mRNA join(2518237..2518387,2518530..2518734,2519180..2519231, FT 2519829..2519892,2519989..2520064,2520393..2520479, FT 2520849..2522902) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-003" FT /product="chromosome 1 open reading frame 93" FT /note="match: cDNAs: Em:AK075273.1" FT mRNA join(2518248..2518387,2518530..2518734,2519180..2519231, FT 2519829..2519892,2519989..2520064,2520361..2520479, FT 2520849..2522907) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-001" FT /product="chromosome 1 open reading frame 93" FT /note="match: cDNAs: Em:AF425266.1 Em:BC022547.1 FT Em:BC032051.1" FT mRNA join(2518256..2518312,2518553..2518734,2519180..2519231, FT 2519829..2519892,2519989..2520064,2520361..2520479, FT 2520849..2521244) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-009" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:BM921857.1" FT mRNA join(2518258..2518387,2518530..2518734,2519180..2519231, FT 2519775..2519892,2519989..2520064,2520393..2520479, FT 2520849..2522906) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-002" FT /product="chromosome 1 open reading frame 93" FT /note="match: cDNAs: Em:AK057027.1" FT mRNA join(2518272..2518387,2518530..2518734,2519180..2519231, FT 2519829..2519892,2519969..2520064,2520361..2520416) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-011" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:BM834179.1" FT mRNA join(2518316..2518387,2518530..2518734,2519180..2519231, FT 2519829..2519892,2520361..2520431) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-010" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:BF001433.1" FT CDS join(2518325..2518387,2518530..2518734,2519180..2519231, FT 2519775..2519892,2519989..2520064,2520393..2520479, FT 2520849..2520853) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-002" FT /standard_name="OTTHUMP00000000969" FT /product="chromosome 1 open reading frame 93" FT /protein_id="CAX30825.1" FT /translation="MSTVDLARVGACILKHAVTGEAVELRSLWREHACVVAGLRRFGCV FT VCRWIAQDLSSLAGLLDQHGVRLVGVGPEALGLQEFLDGDYFAGELYLDESKQLYKELG FT FKRLWTQASPEFGQATWCLRRYNSLSILPAALGKPVRDVAAKAKAVGIQGNLSGDLLQS FT GGLLVVSKEVPRRLRPQGAHPAGPGHLCGGLCQRPASV" FT CDS join(2518325..2518387,2518530..2518734,2519180..2519231, FT 2519829..2519892,2519989..2520064,2520393..2520479, FT 2520849..2520853) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-003" FT /standard_name="OTTHUMP00000000970" FT /product="chromosome 1 open reading frame 93" FT /note="match: proteins: Tr:Q8N2H0" FT /protein_id="CAX30826.1" FT /translation="MSTVDLARVGACILKHAVTGEAVELRSLWREHACVVAGLRRFGCV FT VCRWIAQDLSSLAGLLDQHGVRLVGVGPEALGLQEFLDGDYFAGELYLDESKQLYKELG FT FKRYNSLSILPAALGKPVRDVAAKAKAVGIQGNLSGDLLQSGGLLVVSKEVPRRLRPQG FT AHPAGPGHLCGGLCQRPASV" FT CDS join(2518325..2518387,2518530..2518734,2519180..2519231, FT 2519829..2519892,2519989..2520064,2520361..2520479, FT 2520849..2520866) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-001" FT /standard_name="OTTHUMP00000000968" FT /product="chromosome 1 open reading frame 93" FT /note="match: proteins: Tr:Q8TBF2 Tr:Q9DB60" FT /protein_id="CAX30827.1" FT /translation="MSTVDLARVGACILKHAVTGEAVELRSLWREHACVVAGLRRFGCV FT VCRWIAQDLSSLAGLLDQHGVRLVGVGPEALGLQEFLDGDYFAGELYLDESKQLYKELG FT FKRYNSLSILPAALGKPVRDVAAKAKAVGIQGNLSGDLLQSGGLLVVSKGGDKVLLHFV FT QKSPGDYVPKEHILQVLGISAEVCASDPPQCDREV" FT mRNA join(2518481..2518734,2519180..2519231,2519829..2519892, FT 2519969..2520064,2520361..2520479,2520849..2520952) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-012" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:BF569921.1" FT mRNA join(2518517..2518734,2519180..2519231,2519829..2519892, FT 2519969..2520064,2520393..2520479,2520849..2522908) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-004" FT /product="chromosome 1 open reading frame 93" FT /note="match: cDNAs: Em:AK094901.1" FT mRNA join(2518524..2518734,2519180..2519231,2519829..2520184) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-013" FT /product="chromosome 1 open reading frame 93" FT /note="match: ESTs: Em:BI545971.1" FT mRNA join(2520033..2520479,2520849..2522907) FT /gene="C1orf93" FT /locus_tag="RP3-395M20.10-005" FT /product="chromosome 1 open reading frame 93" FT /note="match: cDNAs: Em:AL359575.1" FT polyA_site complement(2522082) FT polyA_signal complement(2522091..2522096) FT polyA_signal 2522884..2522889 FT polyA_site 2522902 FT polyA_site 2522907 FT mRNA complement(join(2522078..2522528,2522996..2523072, FT 2524094..2524117)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-002" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: ESTs: Em:BF437289.1" FT mRNA complement(join(2523133..2523466,2524094..2524318)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-003" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: ESTs: Em:BI907511.1" FT mRNA complement(join(2523133..2523466,2524160..2524307)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-004" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: ESTs: Em:BI823929.1" FT mRNA complement(join(2524094..2524159,2524272..2524405, FT 2525253..2525512)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-005" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: ESTs: Em:CA405847.1" FT mRNA complement(join(2525293..2525372,2525824..2525882, FT 2526229..2526332,2526715..2526724,2527473..2527546, FT 2528000..2528135)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-006" FT /product="membrane metallo-endopeptidase-like 1" FT misc_feature 2532986..2556795 FT /note="annotated region of clone" FT CDS complement(join(AL139246.20:144180..144279, FT AL139246.20:144747..144823,AL139246.20:145122..145217, FT AL139246.20:145845..145910,AL139246.20:146023..146156, FT AL139246.20:147004..147123,AL139246.20:147575..147633, FT AL139246.20:147980..148083,AL139246.20:148466..148549, FT AL139246.20:149199..149297,AL139246.20:149751..149879, FT AL139246.20:151397..151490,AL139246.20:151844..151980, FT 2535323..2535412,2535586..2535720,2536997..2537062, FT 2537687..2537805,2538413..2538508,2540778..2540858, FT 2541109..2541270,2542720..2542779,2543566..2543643, FT AL831784.17:5975..6128)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-001" FT /standard_name="OTTHUMP00000000967" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: proteins: Sw:Q495T6 Sw:Q9JLI3" FT /protein_id="CAI22652.1" FT /translation="MGKSEGPVGMVESAGRAGQKRPGFLEGGLLLLLLLVTAALVALGV FT LYADRRGKQLPRLASRLCFLQEERTFVKRKPRGIPEAQEVSEVCTTPGCVIAAARILQN FT MDPTTEPCDDFYQFACGGWLRRHVIPETNSRYSIFDVLRDELEVILKAVLENSTAKDRP FT AVEKARTLYRSCMNQSVIEKRGSQPLLDILEVVGGWPVAMDRWNETVGLEWELERQLAL FT MNSQFNRRVLIDLFIWNDDQNSSRHIIYIDQPTLGMPSREYYFNGGSNRKVREAYLQFM FT VSVATLLREDANLPRDSCLVQEDMVQVLELETQLAKATVPQEERHDVIALYHRMGLEEL FT QSQFGLKGFNWTLFIQTVLSSVKIKLLPDEEVVVYGIPYLQNLENIIDTYSARTIQNYL FT VWRLVLDRIGSLSQRFKDTRVNYRKALFGTMVEEVRWRECVGYVNSNMENAVGSLYVRE FT AFPGDSKSMVRELIDKVRTVFVETLDELGWMDEESKKKAQEKAMSIREQIGHPDYILEE FT MNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLREKVDPNLWIIGAAVVNAFYS FT PNRNQIVFPAGILQPPFFSKEQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMMDW FT WSNFSTQHFREQSECMIYQYGNYSWDLADEQNVNGFNTLGENIADNGGVRQAYKAYLKW FT MAEGGKDQQLPGLDLTHEQLFFINYAQVWCGSYRPEFAIQSIKTDVHSPLKYRVLGSLQ FT NLAAFADTFHCARGTPMHPKERCRVW" FT mRNA complement(join(AL139246.20:143833..144279, FT AL139246.20:144747..144823,AL139246.20:145122..145217, FT AL139246.20:145845..145910,AL139246.20:146023..146156, FT AL139246.20:147004..147123,AL139246.20:147575..147633, FT AL139246.20:147980..148083,AL139246.20:148466..148549, FT AL139246.20:149199..149297,AL139246.20:149751..149879, FT AL139246.20:151397..151490,AL139246.20:151844..151980, FT 2535323..2535412,2535586..2535720,2536997..2537062, FT 2537687..2537805,2538413..2538508,2540778..2540858, FT 2541109..2541270,2542720..2542779,2543566..2543643, FT AL831784.17:5975..6165,AL831784.17:9510..9634)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-001" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: cDNAs: Em:AF336981.1 Em:AK093058.1 FT Em:AX747891.1" FT misc_feature 2556695 FT /note="Clone_right_end: RP4-755G5" FT misc_feature 2556796..2634220 FT /note="annotated region of clone" FT CDS complement(join(AL139246.20:144180..144279, FT AL139246.20:144747..144823,AL139246.20:145122..145217, FT AL139246.20:145845..145910,AL139246.20:146023..146156, FT AL139246.20:147004..147123,AL139246.20:147575..147633, FT AL139246.20:147980..148083,AL139246.20:148466..148549, FT AL139246.20:149199..149297,AL139246.20:149751..149879, FT AL139246.20:151397..151490,AL139246.20:151844..151980, FT AL589746.11:2438..2527,AL589746.11:2701..2835, FT AL589746.11:4112..4177,AL589746.11:4802..4920, FT AL589746.11:5528..5623,AL589746.11:7893..7973, FT AL589746.11:8224..8385,AL589746.11:9835..9894, FT AL589746.11:10681..10758,2560770..2560923)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-001" FT /standard_name="OTTHUMP00000000967" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: proteins: Sw:Q495T6 Sw:Q9JLI3" FT /protein_id="CAI17336.1" FT /translation="MGKSEGPVGMVESAGRAGQKRPGFLEGGLLLLLLLVTAALVALGV FT LYADRRGKQLPRLASRLCFLQEERTFVKRKPRGIPEAQEVSEVCTTPGCVIAAARILQN FT MDPTTEPCDDFYQFACGGWLRRHVIPETNSRYSIFDVLRDELEVILKAVLENSTAKDRP FT AVEKARTLYRSCMNQSVIEKRGSQPLLDILEVVGGWPVAMDRWNETVGLEWELERQLAL FT MNSQFNRRVLIDLFIWNDDQNSSRHIIYIDQPTLGMPSREYYFNGGSNRKVREAYLQFM FT VSVATLLREDANLPRDSCLVQEDMVQVLELETQLAKATVPQEERHDVIALYHRMGLEEL FT QSQFGLKGFNWTLFIQTVLSSVKIKLLPDEEVVVYGIPYLQNLENIIDTYSARTIQNYL FT VWRLVLDRIGSLSQRFKDTRVNYRKALFGTMVEEVRWRECVGYVNSNMENAVGSLYVRE FT AFPGDSKSMVRELIDKVRTVFVETLDELGWMDEESKKKAQEKAMSIREQIGHPDYILEE FT MNRRLDEEYSNLNFSEDLYFENSLQNLKVGAQRSLRKLREKVDPNLWIIGAAVVNAFYS FT PNRNQIVFPAGILQPPFFSKEQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMMDW FT WSNFSTQHFREQSECMIYQYGNYSWDLADEQNVNGFNTLGENIADNGGVRQAYKAYLKW FT MAEGGKDQQLPGLDLTHEQLFFINYAQVWCGSYRPEFAIQSIKTDVHSPLKYRVLGSLQ FT NLAAFADTFHCARGTPMHPKERCRVW" FT mRNA join(2564007..2564114,2567795..2568059) FT /locus_tag="RP13-436F16.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI433880.1 Em:BX097663.1" FT mRNA complement(join(AL139246.20:143833..144279, FT AL139246.20:144747..144823,AL139246.20:145122..145217, FT AL139246.20:145845..145910,AL139246.20:146023..146156, FT AL139246.20:147004..147123,AL139246.20:147575..147633, FT AL139246.20:147980..148083,AL139246.20:148466..148549, FT AL139246.20:149199..149297,AL139246.20:149751..149879, FT AL139246.20:151397..151490,AL139246.20:151844..151980, FT AL589746.11:2438..2527,AL589746.11:2701..2835, FT AL589746.11:4112..4177,AL589746.11:4802..4920, FT AL589746.11:5528..5623,AL589746.11:7893..7973, FT AL589746.11:8224..8385,AL589746.11:9835..9894, FT AL589746.11:10681..10758,2560770..2560960, FT 2564305..2564429)) FT /gene="MMEL1" FT /locus_tag="RP3-395M20.11-001" FT /product="membrane metallo-endopeptidase-like 1" FT /note="match: cDNAs: Em:AF336981.1 Em:AK093058.1 FT Em:AX747891.1" FT polyA_signal 2568039..2568044 FT polyA_site 2568059 FT misc_feature 2579264..2632220 FT /note="Tandem repeat. Extensive polymorphism observed in FT different BACs" FT misc_feature 2586581..2586937 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 2589871..2590134 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 2596054..2596100 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 2598663..2599809 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 2609896..2610237 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 2610676..2610959 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 2632220 FT /note="Clone_right_end: RP13-436F16" FT gap 2634221..2684220 FT /estimated_length=50000 FT misc_feature 2684221..2804248 FT /note="annotated region of clone" FT misc_feature 2684221 FT /note="Clone_left_end: RP11-740P5" FT misc_feature 2692455..2692465 FT /note="Single clone region" FT misc_feature 2692469..2692563 FT /note="Single clone region" FT misc_feature 2692469..2692580 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 2692571..2692572 FT /note="Weak data" FT mRNA complement(join(<2700271..2700320,2702384..2702588, FT 2704046..2704271,2706068..2706280)) FT /locus_tag="RP11-740P5.1-001" FT /product="novel protein similar to mouse B230396O12Rik" FT /note="match: cDNAs: Em:AK030055.1" FT /note="match: ESTs: Em:DN831537.1 Em:DN831538.1 FT Em:DY655627.1 Em:DY655628.1" FT CDS complement(join(<2700271..2700320,2702384..2702588, FT 2704046..2704271,2706068..2706156)) FT /locus_tag="RP11-740P5.1-001" FT /standard_name="OTTHUMP00000202542" FT /product="novel protein similar to mouse B230396O12Rik" FT /note="match: proteins: Tr:A2A7W6.1 Tr:A8MXL8.1 Tr:Q5PPS5.1 FT Tr:Q6NV67.1 Tr:Q8C0Q3.1" FT /protein_id="CAQ10653.2" FT /translation="MLQRSPRAGPSRAQGRREAAETGGPTTQEGVACGVHQLATLLMEL FT DSEDEASRLLAADALYRLGRLEETHKALLVALSRRPQAAPVLARLALLQLRRGFFYDAN FT QLVKKLVQSGDTACLQPTLDVFCHEDRQLLQGHCHARALAILRARPGGADGRVHTKEAI FT AYLSLAIFAAGSQASESLLARARCYGF" FT mRNA complement(join(2728415..2728563,2728800..2729257)) FT /locus_tag="RP11-740P5.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA994732.1 Em:BX119185.1" FT mRNA complement(join(2730997..2731253,2731392..2731563)) FT /locus_tag="RP11-740P5.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW236506.1 Em:BF478075.1" FT misc_feature 2767374..2767396 FT /note="Single clone region" FT misc_feature 2802249 FT /note="Clone_left_end: RP5-907A6" FT misc_feature 2804476..2804480 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 2855642 FT /note="Clone_left_end: RP11-333E3" FT misc_feature 2866582 FT /note="Clone_right_end: RP11-740P5" FT misc_feature 2907351 FT /note="Clone_right_end: RP5-907A6" FT misc_feature 2909352..2945557 FT /note="annotated region of clone" FT misc_feature 2931118..2931250 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 2931251 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 60bp by restriction digest data" FT mRNA 2938047..2939467 FT /gene="ACTRT2" FT /locus_tag="RP11-333E3.1-001" FT /product="actin-related protein T2" FT /note="match: cDNAs: Em:AB057364.1 Em:AF440740.1 FT Em:AK058153.1 Em:BC029499.1" FT CDS 2938251..2939384 FT /gene="ACTRT2" FT /locus_tag="RP11-333E3.1-001" FT /standard_name="OTTHUMP00000000569" FT /product="actin-related protein T2" FT /note="match: proteins: Sw:Q8TDY3 Sw:Q8TDY3 Sw:Q8TDY3 FT Sw:Q9D9L5 Tr:Q96LK1" FT /protein_id="CAH72587.1" FT /translation="MFNPHALDSPAVIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQ FT APSAEANQKKYFVGEEALYKQEALQLHSPFERGLITGWDDVERLWKHLFEWELGVKPSD FT QPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSDQAVLALYASACVTGLVVDSGDAV FT TCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLASGHTFPCQLDKGLVDDIKKKLCY FT VALEPEKELSRRPEEVLREYKLPDGNIISLGDPLHQAPEALFVPQQLGSQSPGLSNMVS FT SSITKCDTDIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIKITAPPDRWFS FT TWIGASIVTSLSSFKQMWVTAADFKEFGTSVVQRRCF" FT polyA_signal 2939447..2939452 FT polyA_site 2939467 FT misc_feature 2939566..2939577 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 2940605 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 500bp by restriction digest data" FT misc_feature 2940980..2941042 FT /note="Single clone region. Single read sequenced with dGTP FT big dye terminator reads only. Assembly consistant with FT restriction digest data" FT misc_feature 2941043..2941081 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 2941558 FT /note="Clone_left_end: RP1-163G9" FT misc_feature complement(2945558..3086848) FT /note="annotated region of clone" FT misc_feature complement(3064456..3064793) FT /note="Tandem repeat. Single clone region. Sequence from FT reads from a short insert library derived from a single pUC FT clone. Restriction digest data confirm the assembly. Weak FT data" FT mRNA complement(join(3049491..3049822,3050137..3050273)) FT /locus_tag="RP1-163G9.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW770723.1 Em:BF108395.1" FT misc_feature complement(3046287..3046325) FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT CDS join(2985824..2985860,AL512383.11:17841..18190, FT AL590438.12:33468..33518,AL354743.33:77056..77190, FT AL354743.33:88395..88497,AL354743.33:94695..94902, FT AL354743.33:96643..96790,AL354743.33:97399..97552, FT AL354743.33:103288..104704,AL354743.33:106464..106551, FT AL354743.33:109732..109901,AL354743.33:110571..110648, FT AL354743.33:117485..117654,AL354743.33:117955..118129, FT AL354743.33:122776..123012,AL354743.33:123870..124044, FT AL354743.33:125581..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /standard_name="OTTHUMP00000000611" FT /product="PR domain containing 16" FT /note="match: proteins: Sw:Q9HAZ2 Tr:Q7TPF4" FT /protein_id="CAI19630.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(2985824..2985860,AL512383.11:17841..18190, FT AL590438.12:33468..33518,AL354743.33:77056..77190, FT AL354743.33:88395..88497,AL354743.33:94695..94902, FT AL354743.33:96643..96790,AL354743.33:97399..97552, FT AL354743.33:103288..104704,AL354743.33:106464..106551, FT AL354743.33:109732..109901,AL354743.33:110571..110648, FT AL354743.33:117485..117654,AL354743.33:117955..118129, FT AL354743.33:122776..123012,AL354743.33:123870..124044, FT AL354743.33:125638..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /standard_name="OTTHUMP00000000612" FT /product="PR domain containing 16" FT /protein_id="CAI19631.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(2985824..2985860,AL512383.11:17841..18190, FT AL590438.12:33468..33518,AL354743.33:77056..77193, FT AL354743.33:88395..88497,AL354743.33:94695..94902, FT AL354743.33:96643..96790,AL354743.33:97399..97552, FT AL354743.33:103288..104704,AL354743.33:106467..106551, FT AL354743.33:109732..109901,AL354743.33:110571..110648, FT AL354743.33:117485..117654,AL354743.33:117955..118129, FT AL354743.33:122776..123012,AL354743.33:123870..124044, FT AL354743.33:125581..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /standard_name="OTTHUMP00000000613" FT /product="PR domain containing 16" FT /protein_id="CAI19629.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQVIYYKVIKDIEPGEELLVHVKEGVYPLGTVP FT PGLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQA FT HECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFEC FT ENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEV FT CHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIF FT APGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPG FT IFPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGP FT EEKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPD FT KDKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSI FT KAIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVK FT AEPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRA FT RASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT mRNA join(2985761..2985860,AL512383.11:17841..18190, FT AL590438.12:33468..33518,AL354743.33:77056..77193, FT AL354743.33:88395..88497,AL354743.33:94695..94902, FT AL354743.33:96643..96790,AL354743.33:97399..97552, FT AL354743.33:103288..104704,AL354743.33:106467..106551, FT AL354743.33:109732..109901,AL354743.33:110571..110648, FT AL354743.33:117485..117654,AL354743.33:117955..118129, FT AL354743.33:122776..123012,AL354743.33:123870..124044, FT AL354743.33:125581..126197) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(2985780..2985860,AL512383.11:17841..18190, FT AL590438.12:33468..33518,AL354743.33:77056..77190, FT AL354743.33:88395..88497,AL354743.33:94695..94902, FT AL354743.33:96643..96790,AL354743.33:97399..97552, FT AL354743.33:103288..104704,AL354743.33:106464..106551, FT AL354743.33:109732..109901,AL354743.33:110571..110648, FT AL354743.33:117485..117654,AL354743.33:117955..118129, FT AL354743.33:122776..123012,AL354743.33:123870..124044, FT AL354743.33:125638..127325) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(2985775..2985860,AL512383.11:17841..18190, FT AL590438.12:33468..33518,AL354743.33:77056..77190, FT AL354743.33:88395..88497,AL354743.33:94695..94902, FT AL354743.33:96643..96790,AL354743.33:97399..97552, FT AL354743.33:103288..104704,AL354743.33:106464..106551, FT AL354743.33:109732..109901,AL354743.33:110571..110648, FT AL354743.33:117485..117654,AL354743.33:117955..118129, FT AL354743.33:122776..123012,AL354743.33:123870..124044, FT AL354743.33:125581..130525) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB051462.2" FT mRNA complement(join(2976181..2976301,2976794..2976847, FT 2977065..2977168,2977671..2980619,2980776..2980866, FT 2983901..2984612,2984786..2985001)) FT /locus_tag="RP1-163G9.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AW611763.1 Em:BI759040.1" FT /note="match: cDNAs: Em:AL832943.1" FT mRNA complement(join(2980636..2980866,2983901..2984333)) FT /locus_tag="RP1-163G9.1-004" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC029785.1" FT polyA_signal complement(2980657..2980662) FT polyA_site complement(2980636) FT mRNA complement(join(2976179..2976301,2976794..2976847, FT 2977065..2977168,2977671..2977895,2978155..2978377, FT 2978854..2980350)) FT /locus_tag="RP1-163G9.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK124865.1" FT mRNA complement(join(2977853..2977895,2980010..2980246)) FT /locus_tag="RP1-163G9.1-006" FT /product="novel transcript" FT /note="match: ESTs: Em:AW195452.1" FT mRNA complement(join(2976181..2976847,2977065..2977168, FT 2977671..2978596)) FT /locus_tag="RP1-163G9.1-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:AL833006.1" FT mRNA complement(join(2976181..2976301,2976794..2976847, FT 2977671..2977895,2978155..2978315)) FT /locus_tag="RP1-163G9.1-005" FT /product="novel transcript" FT /note="match: ESTs: Em:AI640149.1 Em:AW299437.1 FT Em:BM669054.1" FT polyA_signal complement(2976194..2976199) FT polyA_site complement(2976179) FT misc_feature complement(2947949..2948093) FT /note="weak data in tandem repeat" FT misc_feature complement(2945558) FT /note="Clone_left_end: RP1-163G9" FT misc_feature 3086849..3129183 FT /note="annotated region of clone" FT misc_feature 3089896..3089995 FT /note="Sequence confirmed by AC026668 sequenced by UWGSC" FT misc_feature 3090128..3090377 FT /note="Sequence confirmed by AC026668 sequenced by UWGSC" FT misc_feature 3090378..3090728 FT /note="Sequence from AC026668 sequenced by WUGSC" FT misc_feature 3090729..3091114 FT /note="Sequence confirmed by AC026668 sequenced by UWGSC" FT misc_feature 3091115..3091323 FT /note="Sequence from AC026668 sequenced by UWGSC" FT misc_feature 3091324..3091416 FT /note="Sequence confirmed by AC026668 sequenced by UWGSC" FT misc_feature 3120273..3120499 FT /note="Sequence from AC026668 sequenced by UWGSC" FT misc_feature 3125184 FT /note="Clone_left_end: RP11-22L13" FT CDS join(complement(AL008733.10:100989..101025), FT 3102689..3103038,AL590438.12:33468..33518, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /standard_name="OTTHUMP00000000611" FT /product="PR domain containing 16" FT /note="match: proteins: Sw:Q9HAZ2 Tr:Q7TPF4" FT /protein_id="CAH71132.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(complement(AL008733.10:100989..101025), FT 3102689..3103038,AL590438.12:33468..33518, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125638..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /standard_name="OTTHUMP00000000612" FT /product="PR domain containing 16" FT /protein_id="CAH71133.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(complement(AL008733.10:100989..101025), FT 3102689..3103038,AL590438.12:33468..33518, FT AL354743.33:77056..77193,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106467..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /standard_name="OTTHUMP00000000613" FT /product="PR domain containing 16" FT /protein_id="CAH71134.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQVIYYKVIKDIEPGEELLVHVKEGVYPLGTVP FT PGLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQA FT HECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFEC FT ENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEV FT CHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIF FT APGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPG FT IFPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGP FT EEKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPD FT KDKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSI FT KAIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVK FT AEPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRA FT RASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT mRNA join(complement(AL008733.10:100989..101088), FT 3102689..3103038,AL590438.12:33468..33518, FT AL354743.33:77056..77193,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106467..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..126197) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(complement(AL008733.10:100989..101069), FT 3102689..3103038,AL590438.12:33468..33518, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125638..127325) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(complement(AL008733.10:100989..101074), FT 3102689..3103038,AL590438.12:33468..33518, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..130525) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB051462.2" FT misc_feature 3129184..3226660 FT /note="annotated region of clone" FT misc_feature 3150518 FT /note="Clone_right_end: RP11-193J6" FT mRNA join(3160696..3160701,AL354743.33:77056..77190, FT AL354743.33:78580..78822) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-004" FT /product="PR domain containing 16" FT /note="match: ESTs: Em:AI278689.1" FT misc_feature 3175307 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 850bp by restriction digest data" FT misc_feature 3222661 FT /note="Clone_left_end: RP4-785P20" FT CDS join(complement(AL008733.10:100989..101025), FT AL512383.11:17841..18190,3160651..3160701, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /standard_name="OTTHUMP00000000611" FT /product="PR domain containing 16" FT /note="match: proteins: Sw:Q9HAZ2 Tr:Q7TPF4" FT /protein_id="CAH71531.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(complement(AL008733.10:100989..101025), FT AL512383.11:17841..18190,3160651..3160701, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125638..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /standard_name="OTTHUMP00000000612" FT /product="PR domain containing 16" FT /protein_id="CAH71529.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(complement(AL008733.10:100989..101025), FT AL512383.11:17841..18190,3160651..3160701, FT AL354743.33:77056..77193,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106467..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..125715) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /standard_name="OTTHUMP00000000613" FT /product="PR domain containing 16" FT /protein_id="CAH71530.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQVIYYKVIKDIEPGEELLVHVKEGVYPLGTVP FT PGLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQA FT HECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFEC FT ENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEV FT CHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIF FT APGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPG FT IFPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGP FT EEKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPD FT KDKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSI FT KAIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVK FT AEPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRA FT RASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT mRNA join(complement(AL008733.10:100989..101088), FT AL512383.11:17841..18190,3160651..3160701, FT AL354743.33:77056..77193,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106467..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..126197) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(complement(AL008733.10:100989..101069), FT AL512383.11:17841..18190,3160651..3160701, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125638..127325) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(complement(AL008733.10:100989..101074), FT AL512383.11:17841..18190,3160651..3160701, FT AL354743.33:77056..77190,AL354743.33:88395..88497, FT AL354743.33:94695..94902,AL354743.33:96643..96790, FT AL354743.33:97399..97552,AL354743.33:103288..104704, FT AL354743.33:106464..106551,AL354743.33:109732..109901, FT AL354743.33:110571..110648,AL354743.33:117485..117654, FT AL354743.33:117955..118129,AL354743.33:122776..123012, FT AL354743.33:123870..124044,AL354743.33:125581..130525) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB051462.2" FT misc_feature 3226661..3365232 FT /note="annotated region of clone" FT mRNA join(AL590438.12:33513..33518,3301716..3301850, FT 3303240..3303482) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-004" FT /product="PR domain containing 16" FT /note="match: ESTs: Em:AI278689.1" FT misc_feature 3266093 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 800bp from restriction digest data and FT spanning pUC clone" FT misc_feature 3266094..3266237 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT misc_feature 3280772 FT /note="Clone_right_end: RP11-22L13" FT misc_feature 3286931 FT /note="Clone_left_end: RP11-168F9" FT polyA_signal 3303452..3303457 FT polyA_site 3303482 FT CDS join(complement(AL008733.10:100989..101025), FT AL512383.11:17841..18190,AL590438.12:33468..33518, FT 3301716..3301850,3313055..3313157,3319355..3319562, FT 3321303..3321450,3322059..3322212,3327948..3329364, FT 3331124..3331211,3334392..3334561,3335231..3335308, FT 3342145..3342314,3342615..3342789,3347436..3347672, FT 3348530..3348704,3350241..3350375) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /standard_name="OTTHUMP00000000611" FT /product="PR domain containing 16" FT /note="match: proteins: Sw:Q9HAZ2 Tr:Q7TPF4" FT /protein_id="CAI22788.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(complement(AL008733.10:100989..101025), FT AL512383.11:17841..18190,AL590438.12:33468..33518, FT 3301716..3301850,3313055..3313157,3319355..3319562, FT 3321303..3321450,3322059..3322212,3327948..3329364, FT 3331124..3331211,3334392..3334561,3335231..3335308, FT 3342145..3342314,3342615..3342789,3347436..3347672, FT 3348530..3348704,3350298..3350375) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /standard_name="OTTHUMP00000000612" FT /product="PR domain containing 16" FT /protein_id="CAI22789.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQIYYKVIKDIEPGEELLVHVKEGVYPLGTVPP FT GLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQAH FT ECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECE FT NCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVC FT HKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFA FT PGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPGI FT FPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGPE FT EKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPDK FT DKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSIK FT AIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVKA FT EPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRAR FT ASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYSRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQGSLDAWLKVTGATSESGAFHPINHL" FT CDS join(complement(AL008733.10:100989..101025), FT AL512383.11:17841..18190,AL590438.12:33468..33518, FT 3301716..3301853,3313055..3313157,3319355..3319562, FT 3321303..3321450,3322059..3322212,3327948..3329364, FT 3331127..3331211,3334392..3334561,3335231..3335308, FT 3342145..3342314,3342615..3342789,3347436..3347672, FT 3348530..3348704,3350241..3350375) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /standard_name="OTTHUMP00000000613" FT /product="PR domain containing 16" FT /protein_id="CAI22790.1" FT /translation="MRSKARARKLAKSDGDVVNNMYEPNRDLLASHSAEDEAEDSAMSP FT IPVGPPSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRKM FT EAGERLGPCVVVPRAAAKETDFGWEQILTDVEVSPQEGCITKISEDLGSEKFCVDANQA FT GAGSWLKYIRVACSCDDQNLTMCQISEQVIYYKVIKDIEPGEELLVHVKEGVYPLGTVP FT PGLDEEPTFRCDECDELFQSKLDLRRHKKYTCGSVGAALYEGLAEELKPEGLGGGSGQA FT HECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFEC FT ENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEV FT CHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIF FT APGLPLTPSPMMDKAKPSPSLNHASLGFNEYFPSRPHPGSLPFSTAPPTFPALTPGFPG FT IFPPSLYPRPPLLPPTSLLKSPLNHTQDAKLPSPLGNPALPLVSAVSNSSQGTTAAAGP FT EEKFESRLEDSCVEKLKTRSSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDVDSDPD FT KDKGKGKSAEGQPKFGGGLAPPGAPNSVAEVPVFYSQHSFFPPPDEQLLTATGAAGDSI FT KAIASIAEKYFGPGFMGMQEKKLGSLPYHSAFPFQFLPNFPHSLYPFTDRALAHNLLVK FT AEPKSPRDALKVGGPSAECPFDLTTKPKDVKPILPMPKGPSAPASGEEQPLDLSIGSRA FT RASQNGGGREPRKNHVYGERKLGAGEGLPQVCPARMPQQPPLHYAKPSPFFMDPIYRVE FT KRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADSGSSLQPLPHHPF FT NFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFS FT ISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENAPVSQHPGVLTNHL FT GTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTRTEKRADMQIVDGSAQC FT PGLASEKQEDVEEEDDDDLEEDDEDSLAGKSQDDTVSPAPEPQAAYEDEEDEEPAASLA FT VGFDHTRRCAEDHEGGLLALEPMPTFGKGLDLRRAAEEAFEVKDVLNSTLDSEALKHTL FT CRQAKNQAYAMMLSLSEDTPLHTPSQGSLDAWLKVTGATSESGAFHPINHL" FT mRNA join(complement(AL008733.10:100989..101088), FT AL512383.11:17841..18190,AL590438.12:33468..33518, FT 3301716..3301853,3313055..3313157,3319355..3319562, FT 3321303..3321450,3322059..3322212,3327948..3329364, FT 3331127..3331211,3334392..3334561,3335231..3335308, FT 3342145..3342314,3342615..3342789,3347436..3347672, FT 3348530..3348704,3350241..3350857) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-003" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(complement(AL008733.10:100989..101069), FT AL512383.11:17841..18190,AL590438.12:33468..33518, FT 3301716..3301850,3313055..3313157,3319355..3319562, FT 3321303..3321450,3322059..3322212,3327948..3329364, FT 3331124..3331211,3334392..3334561,3335231..3335308, FT 3342145..3342314,3342615..3342789,3347436..3347672, FT 3348530..3348704,3350298..3351985) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-002" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB078876.1" FT mRNA join(complement(AL008733.10:100989..101074), FT AL512383.11:17841..18190,AL590438.12:33468..33518, FT 3301716..3301850,3313055..3313157,3319355..3319562, FT 3321303..3321450,3322059..3322212,3327948..3329364, FT 3331124..3331211,3334392..3334561,3335231..3335308, FT 3342145..3342314,3342615..3342789,3347436..3347672, FT 3348530..3348704,3350241..3355185) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-001" FT /product="PR domain containing 16" FT /note="match: cDNAs: Em:AB051462.2" FT mRNA join(3341483..3341623,3342145..3342314,3342615..3342789, FT 3347436..3347672,3350241..3350659) FT /gene="PRDM16" FT /locus_tag="RP4-785P20.1-005" FT /product="PR domain containing 16" FT /note="match: ESTs: Em:BI554270.1" FT polyA_site 3352748 FT polyA_signal 3355163..3355168 FT polyA_site 3355185 FT misc_feature 3363232 FT /note="Clone_right_end: RP4-785P20" FT misc_feature 3365233..3420713 FT /note="annotated region of clone" FT mRNA join(3370990..3371375,3379630..3380236,3382712..3382757, FT 3383732..3383901,3385444..3385500,3385997..3386157, FT 3389642..3389794,3389957..3390086,3391272..3391346, FT 3392534..3392626,3394439..3394590,3394988..3395176, FT 3396081..3396154,3396376..3396477,3397012..3397677) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-001" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: ESTs: Em:BQ218186.1" FT /note="match: cDNAs: Em:AK095984.1 Em:CR609468.1" FT CDS join(3379649..3380236,3382712..3382757,3383732..3383901, FT 3385444..3385500,3385997..3386157,3389642..3389794, FT 3389957..3390086,3391272..3391346,3392534..3392626, FT 3394439..3394590,3394988..3395176,3396081..3396154, FT 3396376..3396477,3397012..3397151) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-001" FT /standard_name="OTTHUMP00000000683" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: proteins: Sw:Q3U5C8.2 Sw:Q5VV41.1" FT /protein_id="CAH70832.1" FT /translation="MAQRHSDSSLEEKLLGHRFHSELRLDAGGNPASGLPMVRGSPRVR FT DDAAFQPQVPAPPQPRPPGHEEPWPIVLSTESPAALKLGTQQLIPKSLAVASKAKTPAR FT HQSFGAAVLSREAARRDPKLLPAPSFSLDDMDVDKDPGGMLRRNLRNQSYRAAMKGLGK FT PGGQGDAIQLSPKLQALAEEPSQPHTRSPAKNKKTLGRKRGHKGSFKDDPQLYQEIQER FT GLNTSQESDDDILDESSSPEGTQKVDATIVVKSYRPAQVTWSQLPEVVELGILDQLSTE FT ERKRQEAMFEILTSEFSYQHSLSILVEEFLQSKELRATVTQMEHHHLFSNILDVLGASQ FT RFFEDLEQRHKAQVLVEDISDILEEHAEKHFHPYIAYCSNEVYQQRTLQKLISSNAAFR FT EALREIERRPACGGLPMLSFLILPMQRVTRLPLLMDTLCLKTQGHSERYKAASRALKAI FT SKLVRQCNEGAHRMERMEQMYTLHTQLDFSKVKSLPLISASRWLLKRGELFLVEETGLF FT RKIASRPTCYLFLFNDVLVVTKKKSEESYMVQDYAQMNHIQVEKIEPSELPLPGGGNRS FT SSVPHPFQVTLLRNSEGRQEQLLLSSDSASDRARWIVALTHSERQWQGLSSKGDLPQVE FT ITKAFFAKQADEVTLQQADVVLVLQQEDGWLYGERLRDGETGWFPEDFARFITSRVAVE FT GNVRRMERLRVETDV" FT mRNA join(3382569..3382757,3383732..3383901,3385444..3385500, FT 3385997..3386157,3389642..3389794,3389957..3390086, FT 3391272..3391346,3392534..3392626,3394439..3394590, FT 3394988..3395176,3396081..3396154,3396376..3396477, FT 3397012..3397677) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-002" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: cDNAs: Em:BC051838.1" FT mRNA join(3383535..3383901,3385444..3385500,3385997..3386157, FT 3389642..3389794,3389957..3390086,3391272..3391346, FT 3392534..3392626,3394439..3394590,3394988..3395176, FT 3396081..3396154,3396376..3396477,3397012..3397677) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-003" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: cDNAs: Em:D89016.1" FT mRNA join(3385108..3385500,3385997..3386157,3389642..3389794, FT 3389957..>3390085) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-005" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: ESTs: Em:BX398305.1" FT mRNA complement(join(3406484..3407153,3409203..3409331, FT 3410335..3410463,3410560..3410688,3410935..3411063, FT 3411177..3411305,3412454..3412582,3413219..3413347, FT 3413552..3413683,3413797..3413925,3414055..3414185, FT 3414935..3415063,3415262..3415390,3415702..3415830, FT 3416152..3416280,3416360..3416488,3417197..3417328, FT 3417530..3417658,3417741..3417872,3418360..3418485, FT AL513320.30:3060..3194,AL513320.30:3274..3408, FT AL513320.30:3960..4088,AL513320.30:5647..5775, FT AL513320.30:6410..6541,AL513320.30:6927..7097, FT AL513320.30:7722..7844,AL513320.30:8635..8754, FT AL513320.30:9402..9539,AL513320.30:9858..9980, FT AL513320.30:12402..12524,AL513320.30:13254..13379, FT AL513320.30:21976..22098)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-002" FT /product="multiple EGF-like-domains 6" FT /note="match: cDNAs: Em:AB011532.1 Em:BC031402.1 FT Em:BC039980.1" FT CDS join(3386000..3386157,3389642..3389794,3389957..>3390085) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-005" FT /standard_name="OTTHUMP00000200633" FT /product="Rho guanine exchange factor (GEF) 16" FT /protein_id="CAQ07782.1" FT /translation="MFEILTSEFSYQHSLSILVEEFLQSKELRATVTQMEHHHLFSNIL FT DVLGASQRFFEDLEQRHKAQVLVEDISDILEEHAEKHFHPYIAYCSNEVYQQRTLQKLI FT SSNAAFREALREIERRPACGGLPMLSFLILPMQRVTRLPLLM" FT CDS join(3386000..3386157,3389642..3389794,3389957..3390086, FT 3391272..3391346,3392534..3392626,3394439..3394590, FT 3394988..3395176,3396081..3396154,3396376..3396477, FT 3397012..3397151) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-002" FT /standard_name="OTTHUMP00000000684" FT /product="Rho guanine exchange factor (GEF) 16" FT /protein_id="CAH70833.1" FT /translation="MFEILTSEFSYQHSLSILVEEFLQSKELRATVTQMEHHHLFSNIL FT DVLGASQRFFEDLEQRHKAQVLVEDISDILEEHAEKHFHPYIAYCSNEVYQQRTLQKLI FT SSNAAFREALREIERRPACGGLPMLSFLILPMQRVTRLPLLMDTLCLKTQGHSERYKAA FT SRALKAISKLVRQCNEGAHRMERMEQMYTLHTQLDFSKVKSLPLISASRWLLKRGELFL FT VEETGLFRKIASRPTCYLFLFNDVLVVTKKKSEESYMVQDYAQMNHIQVEKIEPSELPL FT PGGGNRSSSVPHPFQVTLLRNSEGRQEQLLLSSDSASDRARWIVALTHSERQWQGLSSK FT GDLPQVEITKAFFAKQADEVTLQQADVVLVLQQEDGWLYGERLRDGETGWFPEDFARFI FT TSRVAVEGNVRRMERLRVETDV" FT mRNA join(3388171..3388355,3389642..3389794,3389957..3391021) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-006" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: cDNAs: Em:AK310408.1" FT /note="match: ESTs: Em:DB071802.1" FT mRNA join(3388188..3388355,3389642..3389794,3389957..3390086, FT 3391272..3391346,3392534..>3392583) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-007" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: ESTs: Em:DC340284.1" FT CDS join(3388222..3388355,3389642..3389794,3389957..3390086, FT 3391272..3391346,3392534..>3392583) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-007" FT /standard_name="OTTHUMP00000200632" FT /product="Rho guanine exchange factor (GEF) 16" FT /protein_id="CAQ07783.1" FT /translation="MFASDLLRALDCCPGAGSSGLLPQLGPRQLLAFTVNCLGNHRYLG FT FFEDLEQRHKAQVLVEDISDILEEHAEKHFHPYIAYCSNEVYQQRTLQKLISSNAAFRE FT ALREIERRPACGGLPMLSFLILPMQRVTRLPLLMDTLCLKTQGHSERYKAASRALKAIS FT KLVRQCNEGAHRMERME" FT mRNA join(3389333..3389794,3389957..3390086,3391272..3391346, FT 3392534..3392626,3394439..3395176,3396081..3396154, FT 3396376..3396477,3397012..3397677) FT /gene="ARHGEF16" FT /locus_tag="RP11-168F9.1-004" FT /product="Rho guanine exchange factor (GEF) 16" FT /note="match: cDNAs: Em:AK091910.1" FT misc_feature 3391884 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1300bp by restriction digest data" FT mRNA complement(join(3406484..3407153,3407476..3407523, FT 3409203..3409331,3410335..3410361,3410935..3411063, FT 3411177..3411305,3412454..3412582,3413219..3413347, FT 3413797..3413925,3414935..3415063,3416152..3416280, FT 3416360..3416488,3417197..3417328,3417530..3417658, FT 3417741..3417872,3418360..3418485,AL513320.30:3060..3194, FT AL513320.30:3274..3408,AL513320.30:3960..4088, FT AL513320.30:5647..5775,AL513320.30:6410..6541, FT AL513320.30:6927..7097,AL513320.30:7722..7844, FT AL513320.30:8635..8754,AL513320.30:9402..9539, FT AL513320.30:9858..9980,AL513320.30:12402..12524, FT AL513320.30:13254..13379,AL513320.30:21976..22098, FT AL513320.30:28932..29300)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-001" FT /product="multiple EGF-like-domains 6" FT /note="match: ESTs: Em:AI425396.1 Em:BB612188.1 FT Em:BB665520.1 Em:CA324389.1" FT /note="match: cDNAs: Em:AB011539.2 Em:AF086226.1" FT CDS complement(join(3407092..3407153,3407476..3407523, FT 3409203..3409331,3410335..3410361,3410935..3411063, FT 3411177..3411305,3412454..3412582,3413219..3413347, FT 3413797..3413925,3414935..3415063,3416152..3416280, FT 3416360..3416488,3417197..3417328,3417530..3417658, FT 3417741..3417872,3418360..3418485,AL513320.30:3060..3194, FT AL513320.30:3274..3408,AL513320.30:3960..4088, FT AL513320.30:5647..5775,AL513320.30:6410..6541, FT AL513320.30:6927..7097,AL513320.30:7722..7844, FT AL513320.30:8635..8754,AL513320.30:9402..9539, FT AL513320.30:9858..9980,AL513320.30:12402..12524, FT AL513320.30:13254..13379,AL513320.30:21976..22098, FT AL513320.30:28932..29097)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-001" FT /standard_name="OTTHUMP00000000663" FT /product="multiple EGF-like-domains 6" FT /note="match: proteins: Sw:O75095 Sw:O88281" FT /protein_id="CAH70834.1" FT /translation="MGASRDRGLAALWCLGLLGGLARVAGTHYRYLWRGCYPCHLGQAG FT YPVSAGDQRPDVDECRTHNGGCQHRCVNTPGSYLCECKPGFRLHTDSRTCLAINSCALG FT NGGCQHHCVQLTITRHRCQCRPGFQLQEDGRHCVRRSPCANRNGSCMHRCQVVRGLARC FT ECHVGYQLAADGKACEDVDECAAGLAQCAHGCLNTQGSFKCVCHAGYELGADGRQCYRI FT EMEIVNSCEANNGGCSHGCSHTSAGPLCTCPRGYELDTDQRTCIDVDDCADSPCCQQVC FT TNNPGGYECGCYAGYRLSADGCGCEDVDECASSRGGCEHHCTNLAGSFQCSCEAGYRLH FT EDRRGCSPLEEPMVDLDGELPFVRPLPHIAVLQDELPQLFQDDDVGADEEEAELRGEHT FT LTEKFVCLDDSFGHDCSLTCDDCRNGGTCLLGLDGCDCPEGWTGLICNETCPPDTFGKN FT CSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCHRL FT YGACLCDPGLYGRFCHLTCPPWAFGPGCSEECQCVQPHTQSCDKRDGSCSCKAGFRGER FT CQAECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDCGQECPVGTFGVNC FT SSSCSCGGAPCHGVTGQCRCPPGRTGEDCEADCPEGRWGLGCQEICPACQHAARCDPET FT GACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTGFSCQR FT ACDTGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRCEQQCPQGHFGPGCEQRC FT QCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACDAVNGSCL FT CPAGRRGPRCAEKCLPRDVRAGCRHSGGCLNGGLCDPHTGRCLCPAGWTGDKCQSPCLR FT GWFGEACAQRCSCPPGAACHHVTGACRCPPGFTGSGCEQGCPPGRYGPGCEQLCGCLNG FT GSCDAATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGAACDPVTGTCLCPPGR FT AGVRCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCELACPPGRYGA FT ACHLECSCHNNSTCEPATGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHCD FT CGGGADCDPVSGQCHCVDGYMGPTCREGGPLRLPENPSLAQGSAGTLPASSRPTSRSGG FT PARH" FT polyA_signal 3397657..3397662 FT polyA_site 3397677 FT misc_feature 3399807 FT /note="Clone_left_end: RP11-46F15" FT polyA_site complement(3406484) FT mRNA complement(join(3406876..3407153,3407476..3407523, FT 3409203..3410050)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-003" FT /product="multiple EGF-like-domains 6" FT /note="match: ESTs: Em:BX426097.1" FT mRNA complement(join(3409292..3409331,3410335..3410463, FT 3410560..3410808)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-006" FT /product="multiple EGF-like-domains 6" FT /note="match: ESTs: Em:BF996318.1" FT mRNA complement(join(3409203..3409331,3410335..3410463, FT 3410560..3410688,3410935..3411305,3412454..3412578)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-004" FT /product="multiple EGF-like-domains 6" FT /note="match: ESTs: Em:BQ948709.1" FT mRNA complement(join(3409203..3409331,3410560..3410688, FT 3410935..3411063,3411177..3411305,3412454..3412582, FT 3413219..3413281)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-005" FT /product="multiple EGF-like-domains 6" FT /note="match: ESTs: Em:BM715446.1" FT misc_feature 3416594 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 4200bp by restriction digest data" FT misc_feature 3420714..3548853 FT /note="annotated region of clone" FT mRNA complement(join(AL512413.23:43252..43921, FT AL512413.23:45971..46099,AL512413.23:47103..47231, FT AL512413.23:47328..47456,AL512413.23:47703..47831, FT AL512413.23:47945..48073,AL512413.23:49222..49350, FT AL512413.23:49987..50115,AL512413.23:50320..50451, FT AL512413.23:50565..50693,AL512413.23:50823..50953, FT AL512413.23:51703..51831,AL512413.23:52030..52158, FT AL512413.23:52470..52598,AL512413.23:52920..53048, FT AL512413.23:53128..53256,AL512413.23:53965..54096, FT AL512413.23:54298..54426,AL512413.23:54509..54640, FT AL512413.23:55128..55253,3421772..3421906,3421986..3422120, FT 3422672..3422800,3424359..3424487,3425122..3425253, FT 3425639..3425809,3426434..3426556,3427347..3427466, FT 3428114..3428251,3428570..3428692,3431114..3431236, FT 3431966..3432091,3440688..3440810)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-002" FT /product="multiple EGF-like-domains 6" FT /note="match: cDNAs: Em:AB011532.1 Em:BC031402.1 FT Em:BC039980.1" FT misc_feature 3446072..3446115 FT /note="Sequence from overlapping clone RP11-168F9 FT (AL512413). Assembly confirmed by restriction digest" FT mRNA complement(join(AL512413.23:43252..43921, FT AL512413.23:44244..44291,AL512413.23:45971..46099, FT AL512413.23:47103..47129,AL512413.23:47703..47831, FT AL512413.23:47945..48073,AL512413.23:49222..49350, FT AL512413.23:49987..50115,AL512413.23:50565..50693, FT AL512413.23:51703..51831,AL512413.23:52920..53048, FT AL512413.23:53128..53256,AL512413.23:53965..54096, FT AL512413.23:54298..54426,AL512413.23:54509..54640, FT AL512413.23:55128..55253,3421772..3421906,3421986..3422120, FT 3422672..3422800,3424359..3424487,3425122..3425253, FT 3425639..3425809,3426434..3426556,3427347..3427466, FT 3428114..3428251,3428570..3428692,3431114..3431236, FT 3431966..3432091,3440688..3440810,3447644..3448012)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-001" FT /product="multiple EGF-like-domains 6" FT /note="match: ESTs: Em:AI425396.1 Em:BB612188.1 FT Em:BB665520.1 Em:CA324389.1" FT /note="match: cDNAs: Em:AB011539.2 Em:AF086226.1" FT CDS complement(join(AL512413.23:43860..43921, FT AL512413.23:44244..44291,AL512413.23:45971..46099, FT AL512413.23:47103..47129,AL512413.23:47703..47831, FT AL512413.23:47945..48073,AL512413.23:49222..49350, FT AL512413.23:49987..50115,AL512413.23:50565..50693, FT AL512413.23:51703..51831,AL512413.23:52920..53048, FT AL512413.23:53128..53256,AL512413.23:53965..54096, FT AL512413.23:54298..54426,AL512413.23:54509..54640, FT AL512413.23:55128..55253,3421772..3421906,3421986..3422120, FT 3422672..3422800,3424359..3424487,3425122..3425253, FT 3425639..3425809,3426434..3426556,3427347..3427466, FT 3428114..3428251,3428570..3428692,3431114..3431236, FT 3431966..3432091,3440688..3440810,3447644..3447809)) FT /gene="MEGF6" FT /locus_tag="RP11-46F15.1-001" FT /standard_name="OTTHUMP00000000663" FT /product="multiple EGF-like-domains 6" FT /note="match: proteins: Sw:O75095 Sw:O88281" FT /protein_id="CAI14334.1" FT /translation="MGASRDRGLAALWCLGLLGGLARVAGTHYRYLWRGCYPCHLGQAG FT YPVSAGDQRPDVDECRTHNGGCQHRCVNTPGSYLCECKPGFRLHTDSRTCLAINSCALG FT NGGCQHHCVQLTITRHRCQCRPGFQLQEDGRHCVRRSPCANRNGSCMHRCQVVRGLARC FT ECHVGYQLAADGKACEDVDECAAGLAQCAHGCLNTQGSFKCVCHAGYELGADGRQCYRI FT EMEIVNSCEANNGGCSHGCSHTSAGPLCTCPRGYELDTDQRTCIDVDDCADSPCCQQVC FT TNNPGGYECGCYAGYRLSADGCGCEDVDECASSRGGCEHHCTNLAGSFQCSCEAGYRLH FT EDRRGCSPLEEPMVDLDGELPFVRPLPHIAVLQDELPQLFQDDDVGADEEEAELRGEHT FT LTEKFVCLDDSFGHDCSLTCDDCRNGGTCLLGLDGCDCPEGWTGLICNETCPPDTFGKN FT CSFSCSCQNGGTCDSVTGACRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCHRL FT YGACLCDPGLYGRFCHLTCPPWAFGPGCSEECQCVQPHTQSCDKRDGSCSCKAGFRGER FT CQAECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDCGQECPVGTFGVNC FT SSSCSCGGAPCHGVTGQCRCPPGRTGEDCEADCPEGRWGLGCQEICPACQHAARCDPET FT GACLCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTGFSCQR FT ACDTGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYVGPRCEQQCPQGHFGPGCEQRC FT QCQHGAACDHVSGACTCPAGWRGTFCEHACPAGFFGLDCRSACNCTAGAACDAVNGSCL FT CPAGRRGPRCAEKCLPRDVRAGCRHSGGCLNGGLCDPHTGRCLCPAGWTGDKCQSPCLR FT GWFGEACAQRCSCPPGAACHHVTGACRCPPGFTGSGCEQGCPPGRYGPGCEQLCGCLNG FT GSCDAATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGAACDPVTGTCLCPPGR FT AGVRCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGRHCELACPPGRYGA FT ACHLECSCHNNSTCEPATGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHCD FT CGGGADCDPVSGQCHCVDGYMGPTCREGGPLRLPENPSLAQGSAGTLPASSRPTSRSGG FT PARH" FT misc_feature 3463034 FT /note="Clone_right_end: RP11-168F9" FT misc_feature 3498232..3498325 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 3498326 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 910bp by restriction digest data" FT misc_feature 3498327..3498463 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 3502488..3502880 FT /note="Tandem repeat. Single clone region. Assembly FT confirmed by restriction digest data" FT misc_feature 3507221..3507361 FT /note="Sequence from overlapping clone RP1-187A9 FT (AL359826). Assembly confirmed by restriction digest" FT mRNA join(AL136528.11:119158..119300,AL136528.11:121671..121823, FT AL136528.11:122449..122565,AL136528.11:130409..130481, FT AL136528.11:132133..132236,AL136528.11:133201..133287, FT AL136528.11:133937..134071,AL136528.11:134157..134234, FT AL136528.11:135728..135833,AL136528.11:136893..136941, FT complement(3548777..3548853),complement(3548030..3548221), FT complement(3547331..3547681)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-001" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:AA927748.1 Em:AI805193.1 FT Em:AV729573.1 Em:AW732370.1 Em:AW960345.1 Em:BE396381.1 FT Em:BE513516.1 Em:BF000621.1 Em:BF034373.1 Em:BI759227.1 FT Em:BI761123.1 Em:BI914109.1 Em:BM458289.1 Em:BM707221.1 FT Em:BQ185090.1 Em:BU629131.1 Em:BU729140.1 Em:CA406587.1" FT /note="match: cDNAs: Em:AB034912.1 Em:AK000437.1" FT mRNA join(AL136528.11:119173..119300,AL136528.11:121671..121823, FT AL136528.11:122449..122565,AL136528.11:130409..130481, FT AL136528.11:132133..132236,AL136528.11:133201..133287, FT AL136528.11:133937..134071,AL136528.11:134157..134234, FT AL136528.11:135728..135833,AL136528.11:136893..136941, FT complement(3548777..3548853),complement(3547331..3548221)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-002" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:AI860832.1 Em:AW573286.1 FT Em:BE675325.1 Em:BM993805.1 Em:BX471429.1 Em:CA306676.1 FT Em:CF453772.1" FT /note="match: cDNAs: Em:BC002611.1" FT mRNA join(AL136528.11:119205..119300,AL136528.11:121671..121823, FT AL136528.11:122449..122565,AL136528.11:130409..130481, FT AL136528.11:132133..132236,AL136528.11:133201..133287, FT AL136528.11:134157..134234,AL136528.11:135728..135833, FT AL136528.11:136893..136941,complement(<3548777..3548853)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-005" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:BF037796.1 Em:BF974647.1 FT Em:T83260.1" FT CDS join(AL136528.11:119232..119300,AL136528.11:121671..121823, FT AL136528.11:122449..122565,AL136528.11:130409..130481, FT AL136528.11:132133..132236,AL136528.11:133201..133287, FT AL136528.11:133937..134071,AL136528.11:134157..134234, FT AL136528.11:135728..135833,AL136528.11:136893..136941, FT complement(3548777..3548853),complement(3548030..3548221), FT complement(3547539..3547681)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-001" FT /standard_name="OTTHUMP00000000664" FT /product="WD repeat domain 8" FT /note="match: proteins: Sw:Q9JM98 Sw:Q9P2S5 Tr:Q8BQ21" FT /protein_id="CAI14335.1" FT /translation="MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLY FT TCLDQIQHIEWSADSLFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGR FT HILNTTEFHLRITVWSLCTKSVSYIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIF FT VCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAVWDTCLEYKILLYSLDGRLLSTYSAYEW FT SLGIKSVAWSPSSQFLAVGSYDGKVRILNHVTWKMITEFGHPAAINDPKIVVYKEAEKS FT PQLGLGCLSFPPPRAGAGPLPSSESKYEIASVPVSLQTLKPVTDRANPKIGIGMLAFSP FT DSYFLATRNDNIPNAVWVWDIQKLRLFAVLEQLSPVRAFQWDPQQPRLAICTGGSRLYL FT WSPAGCMSVQVPGEGDFAVLSLCWHLSGDSMALLSKDHFCLCFLETEAVVGTACRQLGG FT HT" FT CDS join(AL136528.11:119232..119300,AL136528.11:121671..121823, FT AL136528.11:122449..122565,AL136528.11:130409..130481, FT AL136528.11:132133..132236,AL136528.11:133201..133287, FT AL136528.11:133937..134071,AL136528.11:134157..134234, FT AL136528.11:135728..135833,AL136528.11:136893..136941, FT complement(3548777..3548853),complement(3547962..3548221)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-002" FT /standard_name="OTTHUMP00000000665" FT /product="WD repeat domain 8" FT /note="match: proteins: Sw:Q9P2S5" FT /protein_id="CAI14336.1" FT /translation="MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLY FT TCLDQIQHIEWSADSLFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGR FT HILNTTEFHLRITVWSLCTKSVSYIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIF FT VCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAVWDTCLEYKILLYSLDGRLLSTYSAYEW FT SLGIKSVAWSPSSQFLAVGSYDGKVRILNHVTWKMITEFGHPAAINDPKIVVYKEAEKS FT PQLGLGCLSFPPPRAGAGPLPSSESKYEIASVPVSLQTLKPVTDRANPKIGIGMLAFSP FT DSYFLATRNDNIPNAVWVWDIQKLRLFAVLEQLSPVRAFQWDPQQPRLAICTGGSRLYL FT WSPAGCMSVQVPGEGKHIPEATDVAALLCAVWHHTG" FT CDS join(AL136528.11:119232..119300,AL136528.11:121671..121823, FT AL136528.11:122449..122565,AL136528.11:130409..130481, FT AL136528.11:132133..132236,AL136528.11:133201..133287, FT AL136528.11:134157..134234,AL136528.11:135728..135833, FT AL136528.11:136893..136941,complement(<3548777..3548853)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-005" FT /standard_name="OTTHUMP00000000666" FT /product="WD repeat domain 8" FT /protein_id="CAI14337.1" FT /translation="MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLY FT TCLDQIQHIEWSADSLFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGR FT HILNTTEFHLRITVWSLCTKSVSYIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIF FT VCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAVWDTCLEVRILNHVTWKMITEFGHPAAI FT NDPKIVVYKEAEKSPQLGLGCLSFPPPRAGAGPLPSSESKYEIASVPVSLQTLKPVTDR FT ANPKIGIGMLAFSPDSYFLATRN" FT mRNA complement(join(3539754..3540120,3540872..3541014, FT 3541196..3541307)) FT /locus_tag="RP11-46F15.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BQ637851.1" FT mRNA join(3541566..3541837,3541988..3542079,3542277..3542453, FT 3544064..3544217,3544973..3546691) FT /gene="TPRG1L" FT /locus_tag="RP11-46F15.3-001" FT /product="tumor protein p63 regulated 1-like" FT /note="match: ESTs: Em:BE730149.1 Em:BF033981.1 FT Em:BG333255.1 Em:BG386770.1 Em:BI547609.1 Em:BU849041.1 FT Em:CA416554.1 Em:CA443810.1 Em:CA446291.1" FT /note="match: cDNAs: Em:AK004324.1 Em:AK004777.1 FT Em:AK025409.1 Em:AK025464.1 Em:AK096427.1 Em:BC019544.1" FT mRNA join(3541614..3541837,3541988..3542079,3544064..3544217, FT 3544973..3546691) FT /gene="TPRG1L" FT /locus_tag="RP11-46F15.3-002" FT /product="tumor protein p63 regulated 1-like" FT /note="match: ESTs: Em:BM665552.1 Em:BM668652.1 FT Em:CA435795.1" FT /note="match: cDNAs: Em:BC019034.1" FT CDS join(3541637..3541837,3541988..3542079,3542277..3542453, FT 3544064..3544217,3544973..3545167) FT /gene="TPRG1L" FT /locus_tag="RP11-46F15.3-001" FT /standard_name="OTTHUMP00000000660" FT /product="tumor protein p63 regulated 1-like" FT /note="match: proteins: Tr:Q8BTC6 Tr:Q9DBS2" FT /protein_id="CAI14339.1" FT /translation="MLQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQT FT LWPLSIHDPTRRARVKEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQGVWLLTEVDHWNN FT EKERLVLVTEQSLLICKYDFISLQCQQVVRIALNAVDTISYGEFQFPPKSLNKREGFGI FT RIQWDKQSRPSFINRWNPWSTNVPYATFTEHPMAGADEKTASLCQLESFKALLIQAVKK FT AQKESPLPGQANGVLILERPLLIETYVGLMSFINNEAKLGYSMTRGKIGF" FT CDS join(3541637..3541837,3541988..3542079,3544064..3544217, FT 3544973..3545167) FT /gene="TPRG1L" FT /locus_tag="RP11-46F15.3-002" FT /standard_name="OTTHUMP00000000661" FT /product="tumor protein p63 regulated 1-like" FT /note="match: proteins: Tr:Q8WV04" FT /protein_id="CAI14338.1" FT /translation="MLQLRDSVDSAGTSPTAVLAAGEEVGAGGGPGGGRPGAGTPLRQT FT LWPLSIHDPTRRARVKEYFVFRPGSIEQAVEEIRVVVRPVEDGEIQGVWLLTEREGFGI FT RIQWDKQSRPSFINRWNPWSTNVPYATFTEHPMAGADEKTASLCQLESFKALLIQAVKK FT AQKESPLPGQANGVLILERPLLIETYVGLMSFINNEAKLGYSMTRGKIGF" FT misc_feature 3544853 FT /note="Clone_left_end: RP5-1092A11" FT polyA_signal 3546669..3546674 FT polyA_site 3546691 FT polyA_site complement(3547331) FT polyA_signal complement(3547353..3547358) FT mRNA join(AL136528.11:129606..130481,AL136528.11:132133..136941, FT complement(3548450..3548853)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-003" FT /product="WD repeat domain 8" FT /note="match: cDNAs: Em:BX537591.1" FT misc_feature complement(3548854..3685794) FT /note="annotated region of clone" FT CDS join(3669046..3669363,3670682..3670805,3672021..3672131, FT 3673297..3673454,3677845..3677994,3679184..3679276, FT 3679672..3680038,3680270..3680400,3683099..3683176, FT 3683797..3684009,AL365330.16:653..757, FT AL365330.16:2271..2393) FT /gene="CCDC27" FT /locus_tag="RP1-286D6.1-001" FT /standard_name="OTTHUMP00000003588" FT /product="coiled-coil domain containing 27" FT /note="match: proteins: Sw:Q2M243" FT /protein_id="CAI19122.1" FT /translation="MFEAIFPSTPQARLKRDPREKPGLSSFRSTFRQQSSLGLCIPRLM FT LPKEASPSQRHSSMSSSMARALVLLQSMASRDARCPEWKPHQKPRTLSKSVQTISRYYR FT KTSEPKDAASLTGFMSKMELRRVFPTHPDCPQFSTRATSMSHCGSPTEADLSGEIDNSS FT ETWRGTQDLFLARRGSDTNVDGYLLPFSKSICEFDYLRKRRKSQTLSPVTSSSVASQSC FT LRKRMPWYLSVIHEKDHCLSELEIQVQKKDEEILLLQEEREALKMQLKCLLKGKGQETS FT MSPGRREQLSDASLKLGRLSLLKAFSRHEEELQHWWQMQEESAAPERGKEPDLGGGEED FT EGLEGEPDGVEDTGAWGGVSQMGSVHEEGSEEEEEEEGDRDEDSEERELPEEEEIPRRR FT ASSLAESFEEELLAQLEEYEQVILDFQFNLEATRTRYSLATGVIASLQQQVDFQETQLR FT KINTENETLQKELRERRQQLQAMTDKFSNLREDKKHQEMMGLIEKDNQLLRQQVSELER FT KLTKRDCVISELDTKVSQLQEQVELDQNHLQRWKQLQEDLQSKKEMIQQAEQHTRVALE FT SSQSRLERLRNKIIQATFSISGTKSLANEISDNDILEALQRIISERSDYYNQLKQKGVK FT VPPLQQSEAFLTSKSKKGTSK" FT mRNA join(3668962..3669363,3670682..3670805,3672021..3672131, FT 3673297..3673454,3677845..3677994,3679184..3679276, FT 3679672..3680038,3680270..3680400,3683099..3683176, FT 3683797..3684009,AL365330.16:653..757, FT AL365330.16:2271..2514) FT /gene="CCDC27" FT /locus_tag="RP1-286D6.1-001" FT /product="coiled-coil domain containing 27" FT /note="match: cDNAs: Em:AK057387.1" FT /note="match: ESTs: Em:BX100905.1" FT mRNA join(3669009..3669363,3670682..3670805,3672021..3672131, FT 3673316..3673454,3677845..3677994,3679184..3679276, FT 3679531..3680038,3680270..3680400,3683099..3683176, FT 3683797..3684009,AL365330.16:653..757, FT AL365330.16:2271..2514) FT /gene="CCDC27" FT /locus_tag="RP1-286D6.1-002" FT /product="coiled-coil domain containing 27" FT /note="match: cDNAs: Em:AB074457.1" FT mRNA complement(join(3653713..3654418,3656797..3656951, FT 3659368..3659521,3659625..3659754,3662171..3663900)) FT /locus_tag="RP5-1092A11.4-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC035073.1" FT mRNA complement(join(3652548..3656951,3659368..3659475, FT 3659625..3659754,3662171..3663886)) FT /locus_tag="RP5-1092A11.4-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AI050876.1 Em:AW295318.1 FT Em:CF137336.1 Em:R06724.1" FT /note="match: cDNAs: Em:AB007964.1" FT mRNA complement(join(3652548..3654418,3656797..3656951, FT 3659368..3659475,3659625..3659754,3662171..3662745, FT 3662851..3663340)) FT /locus_tag="RP5-1092A11.4-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG702684.1" FT /note="match: cDNAs: Em:BC013872.2 Em:BC044603.1" FT mRNA complement(join(3652739..3653122,3653490..3653667, FT 3654345..3654439)) FT /locus_tag="RP5-1092A11.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:CA439799.1" FT polyA_site 3652765 FT polyA_signal 3652744..3652749 FT polyA_signal complement(3652564..3652569) FT polyA_site complement(3652548) FT mRNA complement(join(3628764..3629002,3630751..3630862)) FT /locus_tag="RP5-1092A11.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM674713.1 Em:BM713377.1" FT polyA_signal complement(3628780..3628785) FT polyA_site complement(3628764) FT mRNA join(3607236..3607508,3624113..3624355,3638585..3638771, FT 3639918..3640033,3643679..3643788,3644192..3644334, FT 3644693..3644781,3645891..3646012,3646564..3646712, FT 3647491..3647629,3648027..3648120,3649311..3652765) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-003" FT /product="tumor protein p73" FT /note="match: cDNAs: Em:AB055065.1 Em:AK014503.1 FT Em:AY040827.1 Em:Y19235.1" FT CDS join(3607470..3607508,3624113..3624355,3638585..3638771, FT 3639918..3640033,3643679..3643788,3644192..3644334, FT 3644693..3644781,3645891..3646012,3646564..3646712, FT 3647491..3647629,3648027..3648120,3649311..3649643) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-003" FT /standard_name="OTTHUMP00000003478" FT /product="tumor protein p73" FT /note="match: proteins: Sw:O15350 Tr:Q9JJP1" FT /protein_id="CAI19123.1" FT /translation="MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVP FT THSPYAQPSSTFDTMSPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYC FT QIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPAS FT HLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPI FT LIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAF FT KQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSY FT RQQQQLLQRPSHLQPPSYGPVLSPMNKVHGGMNKLPSVNQLVGQPPPHSSAATPNLGPV FT GPGMLNNHGHAVPANGEMSSSHSAQSMVSGSHCTPPPPYHADPSLVSFLTGLGCPNCIE FT YFTSQGLQSIYHLQNLTIEDLGALKIPEQYRMTIWRGLQDLKQGHDYSTAQQLLRSSNA FT ATISIGGSGELQRQRVMEAVHFRVRHTITIPNRGGPGGGPDEWADFGFDLPDCKARKQP FT IKEEFTEAEIH" FT mRNA join(3607236..3607508,3624113..3624355,3638585..3638771, FT 3639918..3640033,3643679..3643788,3644192..3644334, FT 3644693..3644781,3645891..3646012,3646564..3646712, FT 3647491..3647629,3649311..3649856) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-004" FT /product="tumor protein p73" FT /note="match: cDNAs: Em:AB055066.1 Em:AY040828.1" FT CDS join(3607470..3607508,3624113..3624355,3638585..3638771, FT 3639918..3640033,3643679..3643788,3644192..3644334, FT 3644693..3644781,3645891..3646012,3646564..3646712, FT 3647491..3647629,3649311..3649326) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-004" FT /standard_name="OTTHUMP00000003479" FT /product="tumor protein p73" FT /note="match: proteins: Sw:O15350" FT /protein_id="CAI19124.1" FT /translation="MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVP FT THSPYAQPSSTFDTMSPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYC FT QIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPAS FT HLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPI FT LIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAF FT KQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSY FT RQQQQLLQRPSHLQPPSYGPVLSPMNKVHGGMNKLPSVNQLVGQPPPHSSAATPNLGPV FT GPGMLNNHGHAVPANGEMSSSHSAQSMVSGSHCTPPPPYHADPSLVRTWGP" FT mRNA join(3607236..3607508,3624113..3624355,3638585..3638771, FT 3639918..3640033,3643679..3643788,3644192..3644334, FT 3644693..3644781,3645891..3646012,3647491..3647629, FT 3648027..3648120,3649311..3649856) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-005" FT /product="tumor protein p73" FT /note="match: cDNAs: Em:AY040829.1" FT CDS join(3607470..3607508,3624113..3624355,3638585..3638771, FT 3639918..3640033,3643679..3643788,3644192..3644334, FT 3644693..3644781,3645891..3646012,3647491..3647629, FT 3648027..3648119) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-005" FT /standard_name="OTTHUMP00000003480" FT /product="tumor protein p73" FT /note="match: proteins: Sw:O15350" FT /protein_id="CAI19125.1" FT /translation="MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVP FT THSPYAQPSSTFDTMSPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYC FT QIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPAS FT HLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPI FT LIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAF FT KQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSY FT RQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQRPVHGLGVPLHSATPLPRRPQPRQFFN FT RIGVSKLHRVFHLPRVTEHLPPAEPDH" FT CDS join(3598930..3598994,3599624..3599744,3624113..3624355, FT 3638585..3638771,3639918..3640033,3643679..3643788, FT 3644192..3644334,3644693..3644781,3645891..3646012, FT 3646564..3646712,3647491..3647629,3648027..3648120, FT 3649311..3649643) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-001" FT /standard_name="OTTHUMP00000000662" FT /product="tumor protein p73" FT /note="match: proteins: Sw:O15350 Tr:Q9JJP2" FT /protein_id="CAI19127.1" FT /translation="MAQSTATSPDGGTTFEHLWSSLEPDSTYFDLPQSSRGNNEVVGGT FT DSSMDVFHLEGMTTSVMAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSS FT TFDTMSPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQI FT KVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNL FT SQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRD FT GQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPAL FT GAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRP FT SHLQPPSYGPVLSPMNKVHGGMNKLPSVNQLVGQPPPHSSAATPNLGPVGPGMLNNHGH FT AVPANGEMSSSHSAQSMVSGSHCTPPPPYHADPSLVSFLTGLGCPNCIEYFTSQGLQSI FT YHLQNLTIEDLGALKIPEQYRMTIWRGLQDLKQGHDYSTAQQLLRSSNAATISIGGSGE FT LQRQRVMEAVHFRVRHTITIPNRGGPGGGPDEWADFGFDLPDCKARKQPIKEEFTEAEI FT H" FT CDS join(3598930..3598994,3599624..3599744,3624113..3624355, FT 3638585..3638771,3639918..3640033,3643679..3643788, FT 3644192..3644334,3644693..3644781,3645891..3646012, FT 3646564..3646712,3647491..3647629,3649311..3649326) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-002" FT /standard_name="OTTHUMP00000003477" FT /product="tumor protein p73" FT /protein_id="CAI19126.1" FT /translation="MAQSTATSPDGGTTFEHLWSSLEPDSTYFDLPQSSRGNNEVVGGT FT DSSMDVFHLEGMTTSVMAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSS FT TFDTMSPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQI FT KVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNL FT SQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRD FT GQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPAL FT GAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRP FT SHLQPPSYGPVLSPMNKVHGGMNKLPSVNQLVGQPPPHSSAATPNLGPVGPGMLNNHGH FT AVPANGEMSSSHSAQSMVSGSHCTPPPPYHADPSLVRTWGP" FT mRNA complement(join(3575502..3575994,3578717..3578829, FT 3585189..3585336)) FT /locus_tag="RP5-1092A11.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE795863.1" FT mRNA complement(join(3551578..3551638,3551724..3551858, FT 3552508..3552594,3553559..3553662,3555314..3555386, FT 3563230..3563346,3563972..3564124,3569277..3569325)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-004" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:BX331531.1" FT mRNA join(3569084..3569205,3598897..3598994,3599624..3599744, FT 3624113..3624355,3638585..3638771,3639918..3640033, FT 3643679..3643788,3644192..3644334,3644693..3644781, FT 3645891..3646012,3646564..3646712,3647491..3647629, FT 3648027..3648120,3649311..3652765) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-001" FT /product="tumor protein p73" FT /note="match: ESTs: Em:AA642460.1 Em:AI094238.1 FT Em:AL528847.2 Em:AW503182.1 Em:BE295836.1 Em:BE808133.1 FT Em:BX280538.1 Em:BY717229.1 Em:CA440128.1 Em:CF137367.1" FT /note="match: cDNAs: Em:AK014503.1 Em:Y11416.1 Em:Y11419.1" FT mRNA join(3569129..3569205,3598897..3598994,3599624..3599744, FT 3624113..3624355,3638585..3638771,3639918..3640033, FT 3643679..3643788,3644192..3644334,3644693..3644781, FT 3645891..3646012,3646564..3646712,3647491..3647629, FT 3649311..3649856) FT /gene="TP73" FT /locus_tag="RP5-1092A11.1-002" FT /product="tumor protein p73" FT /note="match: cDNAs: Em:Y11416.1" FT mRNA complement(join(AL513320.30:128619..128969, FT AL513320.30:129318..129509,AL513320.30:130065..130141, FT 3548854..3548902,3549962..3550067,3551561..3551638, FT 3551724..3551858,3552508..3552594,3553559..3553662, FT 3555314..3555386,3563230..3563346,3563972..3564124, FT 3566495..3566637)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-001" FT /product="WD repeat domain 8" FT /note="match: cDNAs: Em:AB034912.1 Em:AK000437.1" FT /note="match: ESTs: Em:AA927748.1 Em:AI805193.1 FT Em:AV729573.1 Em:AW732370.1 Em:AW960345.1 Em:BE396381.1 FT Em:BE513516.1 Em:BF000621.1 Em:BF034373.1 Em:BI759227.1 FT Em:BI761123.1 Em:BI914109.1 Em:BM458289.1 Em:BM707221.1 FT Em:BQ185090.1 Em:BU629131.1 Em:BU729140.1 Em:CA406587.1" FT mRNA complement(join(<3551724..3551858,3553559..3553662, FT 3555314..3555386,3563230..3563346,3563972..3564124, FT 3566495..3566627)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-006" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:BE781919.1" FT mRNA complement(join(3563810..3564124,3566495..3566625)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-010" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:H81154.1" FT mRNA complement(join(AL513320.30:128619..129509, FT AL513320.30:130065..130141,3548854..3548902, FT 3549962..3550067,3551561..3551638,3551724..3551858, FT 3552508..3552594,3553559..3553662,3555314..3555386, FT 3563230..3563346,3563972..3564124,3566495..3566622)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-002" FT /product="WD repeat domain 8" FT /note="match: cDNAs: Em:BC002611.1" FT /note="match: ESTs: Em:AI860832.1 Em:AW573286.1 FT Em:BE675325.1 Em:BM993805.1 Em:BX471429.1 Em:CA306676.1 FT Em:CF453772.1" FT mRNA complement(join(AL513320.30:<130065..130141, FT 3548854..3548902,3549962..3550067,3551561..3551638, FT 3552508..3552594,3553559..3553662,3555314..3555386, FT 3563230..3563346,3563972..3564124,3566495..3566590)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-005" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:BF037796.1 Em:BF974647.1 FT Em:T83260.1" FT CDS complement(join(AL513320.30:128827..128969, FT AL513320.30:129318..129509,AL513320.30:130065..130141, FT 3548854..3548902,3549962..3550067,3551561..3551638, FT 3551724..3551858,3552508..3552594,3553559..3553662, FT 3555314..3555386,3563230..3563346,3563972..3564124, FT 3566495..3566563)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-001" FT /standard_name="OTTHUMP00000000664" FT /product="WD repeat domain 8" FT /note="match: proteins: Sw:Q9JM98 Sw:Q9P2S5 Tr:Q8BQ21" FT /protein_id="CAI19128.1" FT /translation="MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLY FT TCLDQIQHIEWSADSLFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGR FT HILNTTEFHLRITVWSLCTKSVSYIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIF FT VCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAVWDTCLEYKILLYSLDGRLLSTYSAYEW FT SLGIKSVAWSPSSQFLAVGSYDGKVRILNHVTWKMITEFGHPAAINDPKIVVYKEAEKS FT PQLGLGCLSFPPPRAGAGPLPSSESKYEIASVPVSLQTLKPVTDRANPKIGIGMLAFSP FT DSYFLATRNDNIPNAVWVWDIQKLRLFAVLEQLSPVRAFQWDPQQPRLAICTGGSRLYL FT WSPAGCMSVQVPGEGDFAVLSLCWHLSGDSMALLSKDHFCLCFLETEAVVGTACRQLGG FT HT" FT CDS complement(join(AL513320.30:129250..129509, FT AL513320.30:130065..130141,3548854..3548902, FT 3549962..3550067,3551561..3551638,3551724..3551858, FT 3552508..3552594,3553559..3553662,3555314..3555386, FT 3563230..3563346,3563972..3564124,3566495..3566563)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-002" FT /standard_name="OTTHUMP00000000665" FT /product="WD repeat domain 8" FT /note="match: proteins: Sw:Q9P2S5" FT /protein_id="CAI19129.1" FT /translation="MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLY FT TCLDQIQHIEWSADSLFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGR FT HILNTTEFHLRITVWSLCTKSVSYIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIF FT VCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAVWDTCLEYKILLYSLDGRLLSTYSAYEW FT SLGIKSVAWSPSSQFLAVGSYDGKVRILNHVTWKMITEFGHPAAINDPKIVVYKEAEKS FT PQLGLGCLSFPPPRAGAGPLPSSESKYEIASVPVSLQTLKPVTDRANPKIGIGMLAFSP FT DSYFLATRNDNIPNAVWVWDIQKLRLFAVLEQLSPVRAFQWDPQQPRLAICTGGSRLYL FT WSPAGCMSVQVPGEGKHIPEATDVAALLCAVWHHTG" FT CDS complement(join(AL513320.30:<130065..130141, FT 3548854..3548902,3549962..3550067,3551561..3551638, FT 3552508..3552594,3553559..3553662,3555314..3555386, FT 3563230..3563346,3563972..3564124,3566495..3566563)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-005" FT /standard_name="OTTHUMP00000000666" FT /product="WD repeat domain 8" FT /protein_id="CAI19130.1" FT /translation="MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLY FT TCLDQIQHIEWSADSLFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGR FT HILNTTEFHLRITVWSLCTKSVSYIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIF FT VCSDWQLLRHFDTDTQDLTGIEWAPNGCVLAVWDTCLEVRILNHVTWKMITEFGHPAAI FT NDPKIVVYKEAEKSPQLGLGCLSFPPPRAGAGPLPSSESKYEIASVPVSLQTLKPVTDR FT ANPKIGIGMLAFSPDSYFLATRN" FT CDS complement(join(<3551724..3551858,3553559..3553662, FT 3555314..3555386,3563230..3563346,3563972..3564124, FT 3566495..3566563)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-006" FT /standard_name="OTTHUMP00000000667" FT /product="WD repeat domain 8" FT /protein_id="CAI19131.1" FT /translation="MNFSEVFKLSSLLCKFSPDGKYLASCVQYRLVVRDVNTLQILQLY FT TCLDQIQHIEWSADSLFILCAMYKRGLVQVWSLEQPEWHCKIDEGSAGLVASCWSPDGR FT HILNTTEFHLRITVWSLCTKSVSYIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIF FT VCSDWQLLRYKILLYSLDGRLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDGK" FT mRNA complement(join(AL513320.30:129738..130141, FT 3548854..3553662,3555314..3556189)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-003" FT /product="WD repeat domain 8" FT /note="match: cDNAs: Em:BX537591.1" FT mRNA complement(join(3549330..3550067,3551561..3551638, FT 3551724..3551858,3552508..3552594,3553559..3553621)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-007" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:BM922346.1" FT mRNA complement(join(3549874..3550067,3551561..3551638, FT 3551724..3552014)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-009" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:AA948600.1 Em:AA954980.1 FT Em:AI685370.1" FT mRNA complement(join(3551480..3551638,3551724..3551997)) FT /gene="WDR8" FT /locus_tag="RP11-46F15.4-008" FT /product="WD repeat domain 8" FT /note="match: ESTs: Em:BF874291.1 Em:CB268528.1 FT Em:CB268529.1" FT misc_feature complement(3548854) FT /note="Clone_left_end: RP5-1092A11" FT misc_feature 3685795..3745933 FT /note="annotated region of clone" FT mRNA complement(join(3739340..3739805,3739988..3740126, FT 3742322..3742430,3742934..3743000,3743272..3743308, FT 3745830..3745933,AL691523.6:1..4)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-008" FT /product="KIAA0562" FT /note="match: ESTs: Em:BE740974.1 Em:CA429496.1" FT polyA_signal 3688185..3688190 FT polyA_site 3688208 FT mRNA join(3689352..3689405,3689627..3689745,3691863..3692047, FT 3692359..3692546) FT /locus_tag="RP1-286D6.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI655104.1 Em:AI990490.1 FT Em:BE466869.1 Em:BE504634.1 Em:BG764955.1 Em:BI517341.1 FT Em:BX283121.1" FT /note="match: cDNAs: Em:BC035379.1 Em:BC042129.1" FT mRNA join(3689389..3689745,3691863..3691952) FT /locus_tag="RP1-286D6.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI678212.1" FT polyA_signal 3692481..3692486 FT polyA_site 3692546 FT polyA_site complement(3696784) FT polyA_signal complement(3696799..3696804) FT misc_feature 3699060..3699098 FT /note="Sequence from overlapping clone FT dJ897I12(AL390734).Assembly confirmed by restriction FT digest" FT mRNA complement(join(3697699..3697900,3698076..3698165, FT 3699225..3699327,3700560..3700739)) FT /gene="LRRC47" FT /locus_tag="RP1-286D6.3-002" FT /product="leucine rich repeat containing 47" FT /note="match: ESTs: Em:CB136402.1" FT mRNA complement(join(3697854..3697900,3698076..3698165, FT 3699225..3699327,3700334..3700475,3700560..3700611)) FT /gene="LRRC47" FT /locus_tag="RP1-286D6.3-003" FT /product="leucine rich repeat containing 47" FT /note="match: ESTs: Em:BQ352354.1 Em:BQ352355.1" FT misc_feature 3701703..3701754 FT /note="Sequence from overlapping clone FT dJ897I12(AL390734).Assembly confirmed by restriction FT digest" FT CDS join(complement(AL136528.11:16432..16749), FT complement(AL136528.11:14990..15113), FT complement(AL136528.11:13664..13774), FT complement(AL136528.11:12341..12498), FT complement(AL136528.11:7801..7950), FT complement(AL136528.11:6519..6611), FT complement(AL136528.11:5757..6123), FT complement(AL136528.11:5395..5525), FT complement(AL136528.11:2619..2696), FT complement(AL136528.11:1786..1998),3686347..3686451, FT 3687965..3688087) FT /gene="CCDC27" FT /locus_tag="RP1-286D6.1-001" FT /standard_name="OTTHUMP00000003588" FT /product="coiled-coil domain containing 27" FT /note="match: proteins: Sw:Q2M243" FT /protein_id="CAI42526.1" FT /translation="MFEAIFPSTPQARLKRDPREKPGLSSFRSTFRQQSSLGLCIPRLM FT LPKEASPSQRHSSMSSSMARALVLLQSMASRDARCPEWKPHQKPRTLSKSVQTISRYYR FT KTSEPKDAASLTGFMSKMELRRVFPTHPDCPQFSTRATSMSHCGSPTEADLSGEIDNSS FT ETWRGTQDLFLARRGSDTNVDGYLLPFSKSICEFDYLRKRRKSQTLSPVTSSSVASQSC FT LRKRMPWYLSVIHEKDHCLSELEIQVQKKDEEILLLQEEREALKMQLKCLLKGKGQETS FT MSPGRREQLSDASLKLGRLSLLKAFSRHEEELQHWWQMQEESAAPERGKEPDLGGGEED FT EGLEGEPDGVEDTGAWGGVSQMGSVHEEGSEEEEEEEGDRDEDSEERELPEEEEIPRRR FT ASSLAESFEEELLAQLEEYEQVILDFQFNLEATRTRYSLATGVIASLQQQVDFQETQLR FT KINTENETLQKELRERRQQLQAMTDKFSNLREDKKHQEMMGLIEKDNQLLRQQVSELER FT KLTKRDCVISELDTKVSQLQEQVELDQNHLQRWKQLQEDLQSKKEMIQQAEQHTRVALE FT SSQSRLERLRNKIIQATFSISGTKSLANEISDNDILEALQRIISERSDYYNQLKQKGVK FT VPPLQQSEAFLTSKSKKGTSK" FT mRNA join(complement(AL136528.11:16432..16833), FT complement(AL136528.11:14990..15113), FT complement(AL136528.11:13664..13774), FT complement(AL136528.11:12341..12498), FT complement(AL136528.11:7801..7950), FT complement(AL136528.11:6519..6611), FT complement(AL136528.11:5757..6123), FT complement(AL136528.11:5395..5525), FT complement(AL136528.11:2619..2696), FT complement(AL136528.11:1786..1998),3686347..3686451, FT 3687965..3688208) FT /gene="CCDC27" FT /locus_tag="RP1-286D6.1-001" FT /product="coiled-coil domain containing 27" FT /note="match: ESTs: Em:BX100905.1" FT /note="match: cDNAs: Em:AK057387.1" FT mRNA join(complement(AL136528.11:16432..16786), FT complement(AL136528.11:14990..15113), FT complement(AL136528.11:13664..13774), FT complement(AL136528.11:12341..12479), FT complement(AL136528.11:7801..7950), FT complement(AL136528.11:6519..6611), FT complement(AL136528.11:5757..6264), FT complement(AL136528.11:5395..5525), FT complement(AL136528.11:2619..2696), FT complement(AL136528.11:1786..1998),3686347..3686451, FT 3687965..3688208) FT /gene="CCDC27" FT /locus_tag="RP1-286D6.1-002" FT /product="coiled-coil domain containing 27" FT /note="match: cDNAs: Em:AB074457.1" FT misc_feature 3702502..3702891 FT /note="Sequence from overlapping clone dJ897I12 FT (AL390734).Assembly confirmed by restriction digest" FT CDS complement(join(3731966..3732081,3732844..3732934, FT 3739738..3739805,3739988..3740126,3742322..3742430, FT 3742934..3743000,3743272..3743308,3745830..3745933, FT AL691523.6:1..4,AL691523.6:422..628,AL691523.6:1677..1853, FT AL691523.6:4493..4666,AL691523.6:5556..5723, FT AL691523.6:7126..7323,AL691523.6:7923..8150, FT AL691523.6:9595..9750,AL691523.6:10239..10407, FT AL691523.6:15538..15614,AL691523.6:15920..15982, FT AL691523.6:18106..18244,AL691523.6:19239..19412, FT AL691523.6:22926..23038)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-001" FT /standard_name="OTTHUMP00000003590" FT /product="KIAA0562" FT /note="match: proteins: Sw:O60308 Sw:Q80V31" FT /protein_id="CAI42527.1" FT /translation="MPHKIGFVVVSSSGHEDGFSARELMIHAPTVSGWRSPRFCQFPQE FT IVLQMVERCRIRKLQLLAHQYMISSKIEFYISESLPEYFAPYQAERFRRLGYVSLCDNE FT KTGCKARELKSVYVDAVGQFLKLIFHQNHVNKYNIYNQVALVAINIIGDPADFSDESNT FT ASREKLIDHYLGHNSEDPALEGTYARKSDYISPLDDLAFDMYQDPEVAQIIRKLDERKR FT EAVQKERYDYAKKLKQAIADLQKVGERLGRYEVEKRCAVEKEDYDLAKEKKQQMEQYRA FT EVYEQLELHSLLDAELMRRPFDLPLQPLARSGSPCHQKPMPSLPQLEERGTENQFAEPF FT LQEKPSSYSLTISPQHSAVDPLLPATDPHPKINAESLPYDERPLPAIRKHYGEAVVEPE FT MSNADISDARRGGMLGEPEPLTEKALREASSAIDVLGETLVAEAYCKTWSYREDALLAL FT SKKLMEMPVGTPKEDLKNTLRASVFLVRRAIKDIVTSVFQASLKLLKMIITQYIPKHKL FT SKLETAHCVERTIPVLLTRTGDSSARLRVTAANFIQEMALFKEVKSLQIIPSYLVQPLK FT ANSSVHLAMSQMGLLARLLKDLGTGSSGFTIDNVMKFSVSALEHRVYEVRETAVRIILD FT MYRQHQASILEYLPPDDSNTRRNILYKTIFEGFAKIDGRATDAEMRARRKAATEEAEKQ FT KKEEIKALQGQLAALKEIQAEVQEKESDAVKPKNQDIQGGKAAPAEALGIPDEHYLDNL FT CIFCGERSESFTEEGLDLHYWKHCLMLTRCDHCKQVVEISSLTEHLLTECDKKDGFGKC FT YRCSEAVFKEELPRHIKHKDCNPAKPEKLANRCPLCHENFSPGEEAWKAHLMGPAGCTM FT NLRKTHILQKAPALQPGKSSAVAASGPLGSKAGSKIPTPKGGLSKSSSRTYAKR" FT misc_feature 3711145..3711156 FT /note="Sequence from overlapping clone FT dJ897I12(AL390734).Assembly confirmed by restriction FT digest" FT mRNA complement(join(3696784..3697900,3698076..3698165, FT 3699225..3699327,3700560..3700675,3701651..3701767, FT 3703413..3703874,3712426..3713068)) FT /gene="LRRC47" FT /locus_tag="RP1-286D6.3-001" FT /product="leucine rich repeat containing 47" FT /note="match: ESTs: Em:AA846266.1 Em:AA861549.1 FT Em:AI452971.1 Em:AI742518.1 Em:BE746880.1 Em:BF435746.1 FT Em:BG709158.1 Em:BG744226.1 Em:BG823313.1 Em:BM505127.1 FT Em:BU192774.1" FT /note="match: cDNAs: Em:AB033011.1 Em:BC012300.1 FT Em:BC031301.1" FT CDS complement(join(3697652..3697900,3698076..3698165, FT 3699225..3699327,3700560..3700675,3701651..3701767, FT 3703413..3703874,3712426..3713040)) FT /gene="LRRC47" FT /locus_tag="RP1-286D6.3-001" FT /standard_name="OTTHUMP00000003589" FT /product="leucine rich repeat containing 47" FT /note="match: proteins: Sw:Q505F5 Sw:Q8N1G4 Sw:Q8N1G4" FT /protein_id="CAI42528.1" FT /translation="MAAAAVSESWPELELAERERRRELLLTGPGLEERVRAAGGQLPPR FT LFTLPLLHYLEVSGCGSLRAPGPGLAQGLPQLHSLVLRRNALGPGLSPELGPLPALRVL FT DLSGNALEALPPGQGLGPAEPPGLPQLQSLNLSGNRLRELPADLARCAPRLQSLNLTGN FT CLDSFPAELFRPGALPLLSELAAADNCLRELSPDIAHLASLKTLDLSNNQLSEIPAELA FT DCPKLKEINFRGNKLRDKRLEKMVSGCQTRSILEYLRVGGRGGGKGKGRAEGSEKEESR FT RKRRERKQRREGGDGEEQDVGDAGRLLLRVLHVSENPVPLTVRVSPEVRDVRPYIVGAV FT VRGMDLQPGNALKRFLTSQTKLHEDLCEKRTAATLATHELRAVKGPLLYCARPPQDLKI FT VPLGRKEAKAKELVRQLQLEAEEQRKQKKRQSVSGLHRYLHLLDGNENYPCLVDADGDV FT ISFPPITNSEKTKVKKTTSDLFLEVTSATSLQICKDVMDALILKMAEMKKYTLENKEEG FT SLSDTEADAVSGQLPDPTTNPSAGKDGPSLLVVEQVRVVDLEGSLKVVYPSKADLATAP FT PHVTVVR" FT mRNA complement(join(3728645..3732081,3732844..3732934, FT 3739738..3739805,3739988..3740126,3742322..3742430, FT 3742934..3743000,3743272..3743308,3745830..3745933, FT AL691523.6:1..4,AL691523.6:422..628,AL691523.6:1677..1853, FT AL691523.6:4493..4666,AL691523.6:5556..5723, FT AL691523.6:7126..7323,AL691523.6:7923..8150, FT AL691523.6:9595..9750,AL691523.6:10239..10407, FT AL691523.6:15538..15614,AL691523.6:15920..15982, FT AL691523.6:18106..18244,AL691523.6:19239..19412, FT AL691523.6:22926..23052,AL691523.6:27520..27830)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-001" FT /product="KIAA0562" FT /note="match: ESTs: Em:AA890549.1 Em:AL079866.1 FT Em:AW054702.1 Em:AW250028.1 Em:AW732543.1 Em:BE828700.1 FT Em:BE896557.1 Em:BI193652.1 Em:BM052650.1 Em:BM052894.1 FT Em:BM709370.1 Em:BM786519.1 Em:BQ027672.1 Em:CA417174.1 FT Em:CA441169.1 Em:CA442832.1" FT /note="match: cDNAs: Em:AB011134.1 Em:BC001640.1" FT misc_feature 3714676..3714682 FT /note="Sequence from overlapping clone FT dJ897I12(AL390734).Assembly confirmed by restriction FT digest" FT misc_feature 3719052..3719262 FT /note="Sequence from overlapping clone dJ897I12 FT (AL390734).Assembly confirmed by restriction digest" FT misc_feature 3719698..3720055 FT /note="Sequence from overlapping clone FT dJ897I12(AL390734).Assembly confirmed by restriction FT digest" FT misc_feature 3721826..3721972 FT /note="Sequence from overlapping clone dJ897I12 FT (AL390734).Assembly confirmed by restriction digest" FT misc_feature 3722499..3723326 FT /note="Sequence from overlapping clone dJ897I12 FT (AL390734).Assembly confirmed by restriction digest" FT misc_feature 3725065..3725564 FT /note="Sequence from overlapping clone dJ897I12 FT (AL390734).Assembly confirmed by restriction digest" FT polyA_site complement(3728645) FT polyA_signal complement(3728662..3728667) FT misc_feature 3728712..3728859 FT /note="Sequence from overlapping clone FT dJ897I12(AL390734).Assembly confirmed by restriction FT digest" FT polyA_site complement(3731344) FT polyA_signal complement(3731363..3731368) FT polyA_site complement(3732713) FT polyA_signal complement(3732726..3732731) FT mRNA complement(join(3731803..3732081,3732844..3733022)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-009" FT /product="KIAA0562" FT /note="match: ESTs: Em:AA807180.1 Em:AI215905.1" FT misc_feature 3742699..3743150 FT /note="Sequence from overlapping clone FT dJ897I12(AL390734).Assembly confirmed by restriction FT digest" FT misc_feature 3743716..3743725 FT /note="Sequence from overlapping clone dJ897I12 FT (AL390734).Assembly confirmed by restriction digest" FT misc_feature 3743916..3744093 FT /note="Sequence from overlapping clone dJ897I12 FT (AL390734).Assembly confirmed by restriction digest" FT mRNA complement(join(3732713..3732934,3739738..3739805, FT 3739988..3740126,3742322..3742430,3742934..3743000, FT 3743272..3743308,3745830..>3745870)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-007" FT /product="KIAA0562" FT /note="match: ESTs: Em:AA715113.1 Em:AA732726.1 FT Em:AA834568.1 Em:AI216482.1 Em:AW976184.1 Em:BF743439.1" FT CDS complement(join(3732824..3732934,3739738..3739805, FT 3739988..3740126,3742322..3742430,3742934..3743000, FT 3743272..3743308,3745830..>3745870)) FT /codon_start=3 FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-007" FT /standard_name="OTTHUMP00000003630" FT /product="KIAA0562" FT /protein_id="CAI42529.1" FT /translation="QLAALKEIQAEVQEKESDAVKPKNQDIQGGKAAPAEALGIPDEHY FT LDNLCIFCGERSESFTEEGLDLHYWKHCLMLTRCDHCKQVVEISSLTEHLLTECDKKDG FT FGKCYRCSEAVFKEELPRHIKHKDCNPAKPEKLANRCPLCHENFSPGEEAWKAHLMGPA FT GCTMNLRKTHILQKAPALQPGEGQRR" FT misc_feature 3745934..3815907 FT /note="annotated region of clone" FT mRNA complement(join(AL365330.16:53646..54111, FT AL365330.16:54294..54432,AL365330.16:56628..56736, FT AL365330.16:57240..57306,AL365330.16:57578..57614, FT AL365330.16:60136..60239,3745934..3745937)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-008" FT /product="KIAA0562" FT /note="match: ESTs: Em:BE740974.1 Em:CA429496.1" FT mRNA complement(join(3746256..3746561,3747610..3747788)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-011" FT /product="KIAA0562" FT /note="match: ESTs: Em:BX097361.1" FT misc_feature 3747933 FT /note="Clone_right_end: RP1-286D6" FT mRNA complement(join(3805689..3806637,3807133..3807621, FT 3809447..3809560,BX005110.5:2829..2942)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-001" FT /product="chromosome 1 open reading frame 174" FT /note="match: cDNAs: Em:BC035643.1" FT /note="match: ESTs: Em:AA431985.1 Em:AI263389.1 FT Em:AI453753.1 Em:AI610702.1 Em:AL353972.1 Em:AV684263.1 FT Em:AV691731.1 Em:AV692973.1 Em:AV696280.1 Em:BI753170.1 FT Em:BI753576.1 Em:BI822841.1 Em:BM837562.1 Em:BM994753.1 FT Em:BX417418.1 Em:CD514339.1 Em:CF142065.1" FT CDS complement(join(3806524..3806637,3807133..3807621, FT 3809447..3809560,BX005110.5:2829..2843)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-001" FT /standard_name="OTTHUMP00000003854" FT /product="chromosome 1 open reading frame 174" FT /note="match: proteins: Tr:Q80WR5 Tr:Q8CA21 Tr:Q8IYL3" FT /protein_id="CAI17365.1" FT /translation="MRSRKLTGAVRSSARLKARSCSAARLASAQEVAGSTSAKTACLTS FT SSHKATDTRTSKKFKCDKGHLVKSELQKLVPKNDSASLPKVTPETPCENEFAEGSALLP FT GSEAGVSVQQGAASLPLGGCRVVSDSRLAKTRDGLSVPKHSAGSGAEESNSSSTVQKQN FT EPGLQTEDVQKPPLQMDNSVFLDDDSNQPMPVSRFFGNVELMQDLPPASSSCPSMSRRE FT FRKMHFRAKDDDDDDDDDAEM" FT mRNA complement(join(3805689..3806637,3807133..3809560, FT BX005110.5:2829..2950)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-002" FT /product="chromosome 1 open reading frame 174" FT /note="match: cDNAs: Em:AK125092.1" FT /note="match: ESTs: Em:AL705905.1 Em:CB994739.1" FT mRNA complement(join(3805689..3806637,3807133..3807621, FT 3809447..3809560,3811859..3812747,BX005110.5:2829..2904)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-003" FT /product="chromosome 1 open reading frame 174" FT /note="match: cDNAs: Em:BC047611.1" FT polyA_site complement(3750235) FT polyA_signal complement(3750251..3750256) FT mRNA complement(join(3747655..3747786,3750426..3750599, FT 3751489..3751656,3753479..3753700)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-006" FT /product="KIAA0562" FT /note="match: ESTs: Em:BI831887.1" FT mRNA complement(join(<3751626..3751656,3753059..3753256, FT 3753856..3753909,3755528..>3755674)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-005" FT /product="KIAA0562" FT /note="match: ESTs: Em:T89220.1" FT CDS complement(join(<3751626..3751656,3753059..3753256, FT 3753856..3753909,3755528..>3755674)) FT /codon_start=1 FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-005" FT /standard_name="OTTHUMP00000003629" FT /product="KIAA0562" FT /protein_id="CAI17366.1" FT /translation="RLGRYEVEKRCAVEKEDYDLAKEKKQQMEQYRAEVYEQLELHSLL FT DAELHSAVDPLLPATDPHPKINAESLPYDERPLPAIRKHYGEAVVEPEMSNADISDARR FT GGMLGEPEPLTEKALREASSAIDVLGETLVAEAYCKTWS" FT mRNA complement(join(3756321..3756340,3761471..3761547, FT 3761853..3761915,3764039..3764268)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-010" FT /product="KIAA0562" FT /note="match: ESTs: Em:BE930177.1" FT CDS complement(join(<3755647..3755683,3756172..3756340, FT 3761471..3761547,3761853..3761915,3764039..3764177, FT 3768859..3768971)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-004" FT /standard_name="OTTHUMP00000003592" FT /product="KIAA0562" FT /protein_id="CAI17367.1" FT /translation="MPHKIGFVVVSSSGHEDGFSARELMIHAPTVSGWRSPSYVSLCDN FT EKTGCKARELKSVYVDAVGQFLKLIFHQNHVNKYNIYNQVALVAINIIGDPADFSDESN FT TASREKLIDHYLGHNSEDPALEGTYARKSDYISPLDDLAFDMYQDPEVAQIIRKLDERK FT REAVQKERYDYAKKLKQAIADLQKVGERLGRYEVEK" FT CDS complement(join(3759719..3759887,3761471..3761547, FT 3761853..3761915,3764039..3764177,3765172..3765345, FT 3768859..3768971)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-002" FT /standard_name="OTTHUMP00000003591" FT /product="KIAA0562" FT /note="match: proteins: Sw:O60308" FT /protein_id="CAI17368.1" FT /translation="MPHKIGFVVVSSSGHEDGFSARELMIHAPTVSGWRSPRFCQFPQE FT IVLQMVERCRIRKLQLLAHQYMISSKIEFYISESLPEYFAPYQAERFRRLGYVSLCDNE FT KTGCKARELKSVYVDAVGQFLKLIFHQNHVNKYNIYNQVALVAINIIGDPADFSDESNT FT ASREKLIDHYLGHNSEDPALEGTYASSVRTGGESTFGELKGPAVPSSVTLSVLGTSLGQ FT WFPCHLPAVDDNEGTPFQRCLV" FT CDS complement(join(AL365330.16:46272..46387, FT AL365330.16:47150..47240,AL365330.16:54044..54111, FT AL365330.16:54294..54432,AL365330.16:56628..56736, FT AL365330.16:57240..57306,AL365330.16:57578..57614, FT AL365330.16:60136..60239,3745934..3745937,3746355..3746561, FT 3747610..3747786,3750426..3750599,3751489..3751656, FT 3753059..3753256,3753856..3754083,3755528..3755683, FT 3756172..3756340,3761471..3761547,3761853..3761915, FT 3764039..3764177,3765172..3765345,3768859..3768971)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-001" FT /standard_name="OTTHUMP00000003590" FT /product="KIAA0562" FT /note="match: proteins: Sw:O60308 Sw:Q80V31" FT /protein_id="CAI17369.1" FT /translation="MPHKIGFVVVSSSGHEDGFSARELMIHAPTVSGWRSPRFCQFPQE FT IVLQMVERCRIRKLQLLAHQYMISSKIEFYISESLPEYFAPYQAERFRRLGYVSLCDNE FT KTGCKARELKSVYVDAVGQFLKLIFHQNHVNKYNIYNQVALVAINIIGDPADFSDESNT FT ASREKLIDHYLGHNSEDPALEGTYARKSDYISPLDDLAFDMYQDPEVAQIIRKLDERKR FT EAVQKERYDYAKKLKQAIADLQKVGERLGRYEVEKRCAVEKEDYDLAKEKKQQMEQYRA FT EVYEQLELHSLLDAELMRRPFDLPLQPLARSGSPCHQKPMPSLPQLEERGTENQFAEPF FT LQEKPSSYSLTISPQHSAVDPLLPATDPHPKINAESLPYDERPLPAIRKHYGEAVVEPE FT MSNADISDARRGGMLGEPEPLTEKALREASSAIDVLGETLVAEAYCKTWSYREDALLAL FT SKKLMEMPVGTPKEDLKNTLRASVFLVRRAIKDIVTSVFQASLKLLKMIITQYIPKHKL FT SKLETAHCVERTIPVLLTRTGDSSARLRVTAANFIQEMALFKEVKSLQIIPSYLVQPLK FT ANSSVHLAMSQMGLLARLLKDLGTGSSGFTIDNVMKFSVSALEHRVYEVRETAVRIILD FT MYRQHQASILEYLPPDDSNTRRNILYKTIFEGFAKIDGRATDAEMRARRKAATEEAEKQ FT KKEEIKALQGQLAALKEIQAEVQEKESDAVKPKNQDIQGGKAAPAEALGIPDEHYLDNL FT CIFCGERSESFTEEGLDLHYWKHCLMLTRCDHCKQVVEISSLTEHLLTECDKKDGFGKC FT YRCSEAVFKEELPRHIKHKDCNPAKPEKLANRCPLCHENFSPGEEAWKAHLMGPAGCTM FT NLRKTHILQKAPALQPGKSSAVAASGPLGSKAGSKIPTPKGGLSKSSSRTYAKR" FT mRNA complement(join(3750235..3750599,3751489..3751656, FT 3753059..3753256,3753856..3754083,3755528..3755683, FT 3756172..3756340,3761471..3761547,3761853..3761915, FT 3764039..3764177,3765172..3765345,3768859..3768985, FT 3773453..3773762)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-003" FT /product="KIAA0562" FT /note="match: ESTs: Em:CA944603.1" FT /note="match: cDNAs: Em:BC047450.1" FT mRNA complement(join(<3755647..3755683,3756172..3756340, FT 3761471..3761547,3761853..3761915,3764039..3764177, FT 3768859..3768985,3773453..3773758)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-004" FT /product="KIAA0562" FT /note="match: ESTs: Em:BU848755.1 Em:BU930955.1" FT mRNA complement(join(3759673..3759887,3761471..3761547, FT 3761853..3761915,3764039..3764177,3765172..3765345, FT 3768859..3768985,3773453..3773778)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-002" FT /product="KIAA0562" FT /note="match: cDNAs: Em:BC050721.1" FT mRNA complement(join(AL365330.16:42951..46387, FT AL365330.16:47150..47240,AL365330.16:54044..54111, FT AL365330.16:54294..54432,AL365330.16:56628..56736, FT AL365330.16:57240..57306,AL365330.16:57578..57614, FT AL365330.16:60136..60239,3745934..3745937,3746355..3746561, FT 3747610..3747786,3750426..3750599,3751489..3751656, FT 3753059..3753256,3753856..3754083,3755528..3755683, FT 3756172..3756340,3761471..3761547,3761853..3761915, FT 3764039..3764177,3765172..3765345,3768859..3768985, FT 3773453..3773763)) FT /gene="KIAA0562" FT /locus_tag="RP1-286D6.4-001" FT /product="KIAA0562" FT /note="match: cDNAs: Em:AB011134.1 Em:BC001640.1" FT /note="match: ESTs: Em:AA890549.1 Em:AL079866.1 FT Em:AW054702.1 Em:AW250028.1 Em:AW732543.1 Em:BE828700.1 FT Em:BE896557.1 Em:BI193652.1 Em:BM052650.1 Em:BM052894.1 FT Em:BM709370.1 Em:BM786519.1 Em:BQ027672.1 Em:CA417174.1 FT Em:CA441169.1 Em:CA442832.1" FT mRNA join(3773845..3774281,3775282..3775408,3782376..3782564, FT 3784538..3784617,3786169..3786339,3789036..3789136, FT 3800071..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-001" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: ESTs: Em:AI872124.1 Em:BI770511.1 FT Em:BU629454.1 Em:BX118850.1" FT /note="match: cDNAs: Em:AB013918.1 Em:AF039210.1 FT Em:AF064019.1 Em:BC048797.1" FT mRNA join(3773845..3774281,3775282..3775408,3782376..3782564, FT 3784538..3784617,3786169..3786339,3789036..3789136, FT 3789578..3789701,3800071..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-005" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: ESTs: Em:AL702256.1" FT /note="match: cDNAs: Em:AB028911.1" FT mRNA join(3774024..3774281,3775282..3775430,3782376..3782564, FT 3782848..3782962,3784538..3784617,3786169..3786339, FT 3789036..3789136,3800071..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-002" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: cDNAs: Em:BC032827.1" FT mRNA join(3774037..3774281,3775282..3775408,3776984..3777070, FT 3782376..3782564,3784538..3784617,3786169..3786339, FT 3789036..3789136,3800071..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-003" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: cDNAs: Em:AB028913.1" FT mRNA join(3774037..3774281,3775282..3775408,3782207..3782564, FT 3784538..3784617,3786169..3786339,3789036..3789136, FT 3800071..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-004" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: cDNAs: Em:AB028912.1" FT mRNA join(3774081..3774281,3775282..3775408,3782326..3782564, FT 3784538..3784617,3786169..3786339,3789036..3789136, FT 3800071..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-007" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: ESTs: Em:BI517452.1" FT /note="match: cDNAs: Em:AF409062.1" FT mRNA join(3774164..3774281,3775282..3775430,3782376..3782564, FT 3784538..3784617,3786169..3786339,3789036..3789136, FT 3800071..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-006" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: cDNAs: Em:AF409061.1" FT CDS join(3774168..3774281,3775282..3775408,3782376..3782564, FT 3784538..3784617,3786169..3786339,3789036..3789136, FT 3800071..3800305) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-001" FT /standard_name="OTTHUMP00000003633" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: proteins: Sw:O76075" FT /protein_id="CAI17371.1" FT /translation="MLQKPKSVKLRALRSPRKFGVAGRSCQEVLRKGCLRFQLPERGSR FT LCLYEDGTELTEDYFPSVPDNAELVLLTLGQAWQGYVSDIRRFLSAFHEPQVGLIQAAQ FT QLLCDEQAPQRQRLLADLLHNVSQNIAAETRAEDPPWFEGLESRFQSKSGYLRYSCESR FT IRSYLREVSSYPSTVGAEAQEEFLRVLGSMCQRLRSMQYNGSYFDRGAKGGSRLCTPEG FT WFSCQGPFDMDSCLSRHSINPYSNRESRILFSTWNLDHIIEKKRTIIPTLVEAIKEQDG FT REVDWEYFYGLLFTSENLKLVHIVCHKKTTHKLNCDPSRIYKPQTRLKRKQPVRKRQ" FT CDS join(3782327..3782564,3784538..3784617,3786169..3786339, FT 3789036..3789136,3800071..3800305) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-004" FT /standard_name="OTTHUMP00000003634" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /protein_id="CAI17372.1" FT /translation="MCLLLDRHLLFVPLVADVSDIRRFLSAFHEPQVGLIQAAQQLLCD FT EQAPQRQRLLADLLHNVSQNIAAETRAEDPPWFEGLESRFQSKSGYLRYSCESRIRSYL FT REVSSYPSTVGAEAQEEFLRVLGSMCQRLRSMQYNGSYFDRGAKGGSRLCTPEGWFSCQ FT GPFDMDSCLSRHSINPYSNRESRILFSTWNLDHIIEKKRTIIPTLVEAIKEQDGREVDW FT EYFYGLLFTSENLKLVHIVCHKKTTHKLNCDPSRIYKPQTRLKRKQPVRKRQ" FT mRNA join(3784227..3784617,3786169..3786339,3789036..3789109) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-008" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: ESTs: Em:AL602837.1" FT misc_feature 3784800..3785229 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 3785230 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 280bp by restriction digest data" FT misc_feature 3785230..3785446 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(3800071..3800364,3801602..3801993) FT /gene="DFFB" FT /locus_tag="RP13-531C17.1-009" FT /product="DNA fragmentation factor, 40kDa, beta polypeptide FT (caspase-activated DNase)" FT /note="match: ESTs: Em:BG190041.1 Em:BG194151.1 FT Em:BG202840.1" FT polyA_signal 3801971..3801976 FT polyA_site 3801993 FT polyA_site complement(3805689) FT polyA_signal complement(3805713..3805718) FT misc_feature 3815908..3823583 FT /note="annotated region of clone" FT mRNA complement(join(AL691523.6:59756..60704, FT AL691523.6:61200..61688,AL691523.6:63514..63627, FT 3816736..3816849)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-001" FT /product="chromosome 1 open reading frame 174" FT /note="match: cDNAs: Em:BC035643.1" FT /note="match: ESTs: Em:AA431985.1 Em:AI263389.1 FT Em:AI453753.1 Em:AI610702.1 Em:AL353972.1 Em:AV684263.1 FT Em:AV691731.1 Em:AV692973.1 Em:AV696280.1 Em:BI753170.1 FT Em:BI753576.1 Em:BI822841.1 Em:BM837562.1 Em:BM994753.1 FT Em:BX417418.1 Em:CD514339.1 Em:CF142065.1" FT CDS complement(join(AL691523.6:60591..60704, FT AL691523.6:61200..61688,AL691523.6:63514..63627, FT 3816736..3816750)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-001" FT /standard_name="OTTHUMP00000003854" FT /product="chromosome 1 open reading frame 174" FT /note="match: proteins: Tr:Q80WR5 Tr:Q8CA21 Tr:Q8IYL3" FT /protein_id="CAI17266.1" FT /translation="MRSRKLTGAVRSSARLKARSCSAARLASAQEVAGSTSAKTACLTS FT SSHKATDTRTSKKFKCDKGHLVKSELQKLVPKNDSASLPKVTPETPCENEFAEGSALLP FT GSEAGVSVQQGAASLPLGGCRVVSDSRLAKTRDGLSVPKHSAGSGAEESNSSSTVQKQN FT EPGLQTEDVQKPPLQMDNSVFLDDDSNQPMPVSRFFGNVELMQDLPPASSSCPSMSRRE FT FRKMHFRAKDDDDDDDDDAEM" FT mRNA complement(join(AL691523.6:59756..60704, FT AL691523.6:61200..63627,3816736..3816857)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-002" FT /product="chromosome 1 open reading frame 174" FT /note="match: cDNAs: Em:AK125092.1" FT /note="match: ESTs: Em:AL705905.1 Em:CB994739.1" FT mRNA complement(join(AL691523.6:59756..60704, FT AL691523.6:61200..61688,AL691523.6:63514..63627, FT AL691523.6:65926..66814,3816736..3816811)) FT /gene="C1orf174" FT /locus_tag="RP13-531C17.2-003" FT /product="chromosome 1 open reading frame 174" FT /note="match: cDNAs: Em:BC047611.1" FT mRNA join(3816936..3817195,3820529..3820600,3821795..3822096) FT /locus_tag="RP13-15E13.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BI826900.1" FT mRNA join(3816968..3817195,CR847867.6:9376..12206) FT /locus_tag="RP13-15E13.1-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK130173.1" FT mRNA join(3816980..3817195,3820529..3820600, FT CR847867.6:8673..9271,CR847867.6:9376..10428) FT /locus_tag="RP13-15E13.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC016994.1" FT /note="match: ESTs: Em:BG032857.1" FT misc_feature 3821583 FT /note="Clone_right_end: RP13-15E13" FT misc_feature 3823584..3845268 FT /note="annotated region of clone" FT mRNA join(BX005110.5:3061..3288,3830959..3833789) FT /locus_tag="RP13-15E13.1-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK130173.1" FT mRNA join(BX005110.5:3073..3288,BX005110.5:6622..6693, FT 3830256..3830854,3830959..3832011) FT /locus_tag="RP13-15E13.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC016994.1" FT /note="match: ESTs: Em:BG032857.1" FT polyA_signal 3831985..3831990 FT polyA_site 3832011 FT misc_feature 3834942..3835040 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 3843268 FT /note="Clone_right_end: WI2-1744J18" FT gap 3845269..3995268 FT /estimated_length=150000 FT misc_feature 3995269 FT /note="Clone_left_end: WI2-914D12" FT misc_feature 3996368..4019073 FT /note="annotated region of clone" FT misc_feature 3996368 FT /note="Clone_left_end: RP13-614K11" FT mRNA join(4000673..4000758,4001054..4001203,4009087..4009411) FT /locus_tag="RP13-614K11.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AW247556.1" FT mRNA join(4000677..4000758,4001054..4001203,4012313..4015322) FT /locus_tag="RP13-614K11.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI300964.1 Em:BE467422.1" FT /note="match: cDNAs: Em:AK124708.1" FT polyA_site complement(4007209) FT polyA_signal complement(4007229..4007234) FT mRNA complement(join(4007209..4007388,4008017..4008655, FT 4008923..4009040)) FT /locus_tag="RP13-614K11.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI093840.1 Em:AI184536.1 FT Em:AI676018.1 Em:BX095399.1" FT misc_feature 4017074 FT /note="Clone_left_end: RP11-718D19" FT misc_feature 4074977..4074999 FT /note="Sequence generated from a transposon library derived FT from a single pUC clone. Sequence from uni-directional dGTP FT big dye terminator reads only. Restriction digest data FT confirm the assembly" FT misc_feature 4075000 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 260bp by restriction digest data" FT misc_feature 4075000..4075056 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT misc_feature 4084252..4084589 FT /note="Sequence from overlapping clone RP13-614K11 FT (AL928679). Assembly confirmed by restriction digest" FT misc_feature 4086544..4086822 FT /note="Sequence from overlapping clone RP13-614K11 FT (AL928679). Assembly confirmed by restriction digest" FT misc_feature 4135451..4136540 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Assembly consistent with restriction digest data" FT misc_feature 4136541 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 500bp by restriction digest data" FT misc_feature 4158100 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 30bp by restriction digest data" FT misc_feature 4179332 FT /note="Clone_left_end: RP11-374C13" FT misc_feature 4183332..4322604 FT /note="annotated region of clone" FT misc_feature 4194633..4194791 FT /note="Single read sequenced with dGTP big dye terminator FT chemistry. Assembly confirmed by restriction digest data" FT misc_feature 4194792 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 500bp by restriction digest data" FT misc_feature 4202442..4202690 FT /note="Assembly confirmed by restriction digest data" FT misc_feature 4202444..4202447 FT /note="Weak data" FT misc_feature 4202691 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1000bp by restriction digest data" FT misc_feature 4220750..4220751 FT /note="Weak data" FT misc_feature 4220768..4220780 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 4220781 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 400bp by restriction digest data" FT CDS complement(4235588..4235959) FT /pseudo FT /locus_tag="RP11-374C13.1-001" FT /product="eukaryotic translation elongation factor 1 delta FT (guanine nucleotide exchange protein) (EEF1D) pseudogene" FT /note="match: proteins: Sw:P29692 Sw:P57776 Tr:Q80T06 FT Tr:Q91VK2 Tr:Q96I38 Tr:Q9BW34" FT misc_feature 4244828..4244972 FT /note="Sequence from clone PCR only. Assembly confirmed by FT restriction digest data" FT misc_feature 4318605 FT /note="Clone_left_end: RP11-168B8" FT misc_feature 4322605..4479763 FT /note="annotated region of clone" FT misc_feature 4363705 FT /note="Clone_right_end: RP11-374C13" FT misc_feature 4394570 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 700bp by restriction digest data" FT misc_feature 4394571..4394916 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(4472111..4472692,4475613..4475647,4476372..4476608, FT AL355602.11:5057..5484,AL355602.11:5645..5745, FT AL355602.11:6291..6984) FT /locus_tag="RP5-1166F10.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK093498.1 Em:AX748168.1" FT /note="match: ESTs: Em:AW628519.1" FT misc_feature 4475764 FT /note="Clone_left_end: RP5-1166F10" FT misc_feature 4479764..4576926 FT /note="annotated region of clone" FT polyA_signal 4484719..4484724 FT polyA_site 4484747 FT misc_feature 4574827 FT /note="Clone_left_end: RP1-37J18" FT mRNA join(AL591916.8:151507..152088,AL591916.8:155009..155043, FT AL591916.8:155768..156004,4482820..4483247, FT 4483408..4483508,4484054..4484747) FT /locus_tag="RP5-1166F10.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK093498.1 Em:AX748168.1" FT /note="match: ESTs: Em:AW628519.1" FT misc_feature complement(4576927..4708253) FT /note="annotated region of clone" FT mRNA join(4631608..4631689,4632530..4632652,4642337..4642634, FT 4643143..4643238,4643399..4643481) FT /locus_tag="RP1-37J18.2-001" FT /product="Novel transcript" FT /note="match: ESTs: Em:BX111285.1" FT mRNA join(4611795..4612109,4612165..4612205) FT /locus_tag="RP1-37J18.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA905451.1" FT misc_feature 4708254..4737092 FT /note="annotated region of clone" FT mRNA join(4714792..4715514,Z98886.2:34968..35767, FT AL023586.1:36217..36304,AL023586.1:38644..38889, FT AL023586.1:40791..40922,AL023586.1:43765..44158) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-002" FT /product="adherens junctions associated protein 1" FT /note="match: cDNAs: Em:AL049673.1" FT /note="match: ESTs: Em:AA835004.1 Em:BG460226.1 FT Em:BM914453.1" FT mRNA join(4715105..4715514,Z98886.2:34968..35767, FT AL023586.1:36217..36304,AL023586.1:38644..38889, FT AL023586.1:40791..40922,AL023586.1:48909..50154) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-001" FT /product="adherens junctions associated protein 1" FT /note="match: cDNAs: Em:AF052143.1 Em:AF175409.1 FT Em:AL049672.1 Em:AY282806.1" FT /note="match: ESTs: Em:H10123.1 Em:T80070.1" FT CDS join(4715486..4715514,Z98886.2:34968..35767, FT AL023586.1:36217..36304,AL023586.1:38644..38889, FT AL023586.1:40791..40863) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-001" FT /standard_name="OTTHUMP00000000694" FT /product="adherens junctions associated protein 1" FT /note="match: proteins: Sw:Q4W8E7.1 Sw:Q9UKB5.1" FT /protein_id="CAH72438.1" FT /translation="MWIQQLLGLSSMSIRWPGRPLGSHAWILIAMFQLAVDLPACEALG FT PGPEFWLLPRSPPRPPRLWSFRSGQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRP FT RDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLRRGKRHLQGDG FT LSSFDSRGSRPTTETEFIAWGPTGDEEALESNTFPGVYGPTTVSILQTRKTTVAATTTT FT TTTATPMTLQTKGFTESLDPRRRIPGGVSTTEPSTSPSNNGEVTQPPRILGEASGLAVH FT QIITITVSLIMVIAALITTLVLKNCCAQSGNTRRNSHQRKTNQQEESCQNLTDFPSARV FT PSSLDIFTAYNETLQCSHECVRASVPVYTDETLHSTTGEYKSTFNGNRPSSSDRHLIPV FT AFVSEKWFEISC" FT misc_feature 4736893 FT /note="Clone_left_end: RP1-77N19" FT misc_feature 4737093..4793796 FT /note="annotated region of clone" FT mRNA join(AL391808.9:6639..7361,4771960..4772759, FT AL023586.1:36217..36304,AL023586.1:38644..38889, FT AL023586.1:40791..40922,AL023586.1:43765..44158) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-002" FT /product="adherens junctions associated protein 1" FT /note="match: cDNAs: Em:AL049673.1" FT /note="match: ESTs: Em:AA835004.1 Em:BG460226.1 FT Em:BM914453.1" FT mRNA join(AL391808.9:6952..7361,4771960..4772759, FT AL023586.1:36217..36304,AL023586.1:38644..38889, FT AL023586.1:40791..40922,AL023586.1:48909..50154) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-001" FT /product="adherens junctions associated protein 1" FT /note="match: cDNAs: Em:AF052143.1 Em:AF175409.1 FT Em:AL049672.1 Em:AY282806.1" FT /note="match: ESTs: Em:H10123.1 Em:T80070.1" FT CDS join(AL391808.9:7333..7361,4771960..4772759, FT AL023586.1:36217..36304,AL023586.1:38644..38889, FT AL023586.1:40791..40863) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-001" FT /standard_name="OTTHUMP00000000694" FT /product="adherens junctions associated protein 1" FT /note="match: proteins: Sw:Q4W8E7.1 Sw:Q9UKB5.1" FT /protein_id="CAI22750.1" FT /translation="MWIQQLLGLSSMSIRWPGRPLGSHAWILIAMFQLAVDLPACEALG FT PGPEFWLLPRSPPRPPRLWSFRSGQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRP FT RDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLRRGKRHLQGDG FT LSSFDSRGSRPTTETEFIAWGPTGDEEALESNTFPGVYGPTTVSILQTRKTTVAATTTT FT TTTATPMTLQTKGFTESLDPRRRIPGGVSTTEPSTSPSNNGEVTQPPRILGEASGLAVH FT QIITITVSLIMVIAALITTLVLKNCCAQSGNTRRNSHQRKTNQQEESCQNLTDFPSARV FT PSSLDIFTAYNETLQCSHECVRASVPVYTDETLHSTTGEYKSTFNGNRPSSSDRHLIPV FT AFVSEKWFEISC" FT unsure 4748713..4748754 FT /note="poor double stranding" FT mRNA join(4771215..4771246,4771960..4772225) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-003" FT /product="adherens junctions associated protein 1" FT /note="match: ESTs: Em:AI419771.1" FT misc_feature 4793597 FT /note="Clone_left_end: RP3-426F10" FT misc_feature 4793797..4885336 FT /note="annotated region of clone" FT mRNA join(AL391808.9:6639..7361,Z98886.2:34968..35767, FT 4829913..4830000,4832340..4832585,4834487..4834618, FT 4837461..4837854) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-002" FT /product="adherens junctions associated protein 1" FT /note="match: cDNAs: Em:AL049673.1" FT /note="match: ESTs: Em:AA835004.1 Em:BG460226.1 FT Em:BM914453.1" FT mRNA join(AL391808.9:6952..7361,Z98886.2:34968..35767, FT 4829913..4830000,4832340..4832585,4834487..4834618, FT 4842605..4843850) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-001" FT /product="adherens junctions associated protein 1" FT /note="match: cDNAs: Em:AF052143.1 Em:AF175409.1 FT Em:AL049672.1 Em:AY282806.1" FT /note="match: ESTs: Em:H10123.1 Em:T80070.1" FT CDS join(AL391808.9:7333..7361,Z98886.2:34968..35767, FT 4829913..4830000,4832340..4832585,4834487..4834559) FT /gene="AJAP1" FT /locus_tag="RP3-426F10.1-001" FT /standard_name="OTTHUMP00000000694" FT /product="adherens junctions associated protein 1" FT /note="match: proteins: Sw:Q4W8E7.1 Sw:Q9UKB5.1" FT /protein_id="CAI20566.1" FT /translation="MWIQQLLGLSSMSIRWPGRPLGSHAWILIAMFQLAVDLPACEALG FT PGPEFWLLPRSPPRPPRLWSFRSGQPARVPAPVWSPRPPRVERIHGQMQMPRARRAHRP FT RDQAAALVPKAGLAKPPAAAKSSPSLASSSSSSSSAVAGGAPEQQALLRRGKRHLQGDG FT LSSFDSRGSRPTTETEFIAWGPTGDEEALESNTFPGVYGPTTVSILQTRKTTVAATTTT FT TTTATPMTLQTKGFTESLDPRRRIPGGVSTTEPSTSPSNNGEVTQPPRILGEASGLAVH FT QIITITVSLIMVIAALITTLVLKNCCAQSGNTRRNSHQRKTNQQEESCQNLTDFPSARV FT PSSLDIFTAYNETLQCSHECVRASVPVYTDETLHSTTGEYKSTFNGNRPSSSDRHLIPV FT AFVSEKWFEISC" FT polyA_signal 4837836..4837841 FT polyA_site 4837855 FT polyA_signal 4843806..4843811 FT polyA_signal 4843832..4843837 FT polyA_site 4843851 FT misc_feature complement(4958305..4958662) FT /note="Single clone region. pac pcr only" FT misc_feature complement(4885337) FT /note="Clone_left_end: RP5-1096P7" FT misc_feature 5027238..5027256 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 5027257 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 120bp by restriction digest data" FT misc_feature 5027258 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 5052295 FT /note="Clone_right_end: RP4-603B14" FT misc_feature complement(5078501..5253148) FT /note="annotated region of clone" FT misc_feature complement(5253148) FT /note="Clone_right_end: RP11-542C10" FT misc_feature complement(5159160) FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 500bp by restriction digest data" FT misc_feature complement(5159141..5159159) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(5146519..5146629,5148311..5148433, FT 5150640..5150687,5150793..5150959)) FT /locus_tag="RP11-542C10.1-001" FT /product="Putative novel transcript" FT /note="match: ESTs: Em:AI239428.1 Em:AW188195.1" FT misc_feature complement(5078501) FT /note="Clone_left_end: RP11-542C10" FT misc_feature complement(5408760) FT /note="Clone_right_end: RP4-703E10" FT misc_feature complement(5392227) FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 110bp from restriction digest data and FT spanning pUC clone" FT misc_feature complement(5378961..5379120) FT /note="Sequence confirmed by AC068226 sequenced by WIBR" FT misc_feature complement(5289767) FT /note="Clone_left_end: RP4-703E10" FT misc_feature 5424526 FT /note="Clone_right_end: CTD-2338G21" FT misc_feature 5433360 FT /note="Clone_right_end: WI2-3534A6" FT misc_feature 5534679 FT /note="Clone_left_end: RP1-58B11" FT misc_feature 5643630..5749216 FT /note="annotated region of clone" FT misc_feature 5660485 FT /note="Clone_left_end: RP5-1185F7" FT misc_feature 5713704..5713780 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 5713729..5713732 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 5713734..5713780 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 5714259..5714393 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(5647428..5647635,5728201..5728355)) FT /locus_tag="RP11-154H17.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ435581.1" FT misc_feature 5737154..5737280 FT /note="Sequence from overlapping clone RP5-1185F7 FT (AL355856). Assembly confirmed by restriction digest" FT misc_feature 5745813 FT /note="Clone_left_end: RP5-1098C18" FT misc_feature 5747216 FT /note="Clone_right_end: RP11-154H17" FT misc_feature 5808479..5808485 FT /note="1327 bases of IS2 transposon V00610 removed here. FT This sequence represents the duplicated flanking sequence FT of the IS2" FT misc_feature 5838412 FT /note="Clone_right_end: RP5-1098C18" FT misc_feature 5862935 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 340bp by restriction digest data" FT misc_feature 5872942 FT /note="Clone_left_end: RP11-33M12" FT misc_feature 5874942..5945551 FT /note="annotated region of clone" FT misc_feature 5875334 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 400bp by restriction digest data" FT misc_feature 5887905 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 430bp by restriction digest data" FT misc_feature 5890367 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 900bp by restriction digest data" FT misc_feature 5897405..5897654 FT /note="Sequence confirmed by AC026968 sequenced by WIBR" FT misc_feature 5897655..5897667 FT /note="Sequence from AC026968 sequenced by WIBR" FT misc_feature 5897668..5897875 FT /note="Sequence confirmed by AC026968 sequenced by WIBR" FT polyA_site complement(5922871) FT polyA_signal complement(5922883..5922888) FT mRNA complement(join(5923270..5924093,5924398..5924733)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-007" FT /product="nephronophthisis 4" FT /note="match: ESTs: Em:BF340853.1 Em:CD246068.1" FT mRNA complement(join(5922871..5924093,5924398..5926518, FT 5927090..5927712)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-010" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:BC028627.1 Em:BC050076.1" FT mRNA complement(join(5925992..5926518,5927090..5927712)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-006" FT /product="nephronophthisis 4" FT /note="match: ESTs: Em:BG722849.1 Em:BI561269.1 FT Em:BX491299.1" FT mRNA complement(join(5922871..5926518,5927090..5927175, FT 5927800..5928435)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-004" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AK127333.1" FT CDS complement(join(5926429..5926518,5927090..5927175, FT 5927800..5928097)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-004" FT /standard_name="OTTHUMP00000000747" FT /product="nephronophthisis 4" FT /protein_id="CAH72672.1" FT /translation="MPDLPRSWQWRVRGSWQQWRYVCCLRRDKKLLTSLVPIPTLSVAS FT SQVLFRASGGKPIAVLCLTVELQPHVVDQVFRFYHPELSFLKKAIRLPPWHTFPGAPVG FT MLGEDPPVHVRCSDPNVICETQNVGPGEPRDIFLKVASGPSPEIKDFFVIIYS" FT mRNA complement(join(5927142..5927175,5927800..5927956, FT 5933312..5933901)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-008" FT /product="nephronophthisis 4" FT /note="match: ESTs: Em:BM741189.1 Em:BM741440.1 FT Em:BM742505.1 Em:BM744331.1 Em:BM744409.1 Em:BM744427.1 FT Em:BM756774.1 Em:BM756830.1 Em:BM756854.1 Em:BM756885.1 FT Em:BM765345.1 Em:BM766759.1 Em:BM770843.1 Em:BX642078.1" FT mRNA complement(join(5936939..5937358,5940174..5942909)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-003" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AK128182.1" FT misc_feature 5941552 FT /note="Clone_left_end: RP11-49J3" FT misc_feature 5942752..5942782 FT /note="Sequence from overlapping clone RP11-49J3 FT (AL356261). Assembly confirmed by restriction digest" FT mRNA join(AL035406.25:150972..151201,AL035406.25:157118..157290, FT complement(AL356261.23:94779..94922), FT complement(AL356261.23:85596..85768), FT complement(AL356261.23:83808..83872), FT complement(AL356261.23:78303..78458), FT complement(AL356261.23:69209..69345), FT complement(AL356261.23:64579..64760), FT complement(AL356261.23:63613..63739), FT complement(AL356261.23:49656..49838), FT complement(AL356261.23:44158..44296), FT complement(AL356261.23:25661..25722), FT complement(AL356261.23:23624..23731), FT complement(AL356261.23:22141..22289), FT complement(AL356261.23:21801..21992), FT complement(AL356261.23:21126..21313), FT complement(AL356261.23:7377..7537), FT complement(AL356261.23:3795..3975), FT complement(5940174..5940299),complement(5939406..5939692), FT complement(5937153..5937358),complement(5936446..5936583), FT complement(5936008..5936138),complement(5934934..5935154), FT complement(5934531..5934717),complement(5933312..5933395), FT complement(5927800..5927956),complement(5927090..5927175), FT complement(5926433..5926518),complement(5925162..5925333), FT complement(5924398..5924577),complement(5923950..5924093), FT complement(5922873..5923465)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-002" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:BC040520.1" FT mRNA join(AL035406.25:150974..151201,AL035406.25:157118..157290, FT complement(AL356261.23:94779..94922), FT complement(AL356261.23:85596..85768), FT complement(AL356261.23:83808..83872), FT complement(AL356261.23:78303..78458), FT complement(AL356261.23:69209..69345), FT complement(AL356261.23:64579..64760), FT complement(AL356261.23:63613..63739), FT complement(AL356261.23:49656..49838), FT complement(AL356261.23:44158..44296), FT complement(AL356261.23:25661..25722), FT complement(AL356261.23:23624..23731), FT complement(AL356261.23:22141..22289), FT complement(AL356261.23:21801..21992), FT complement(AL356261.23:21126..21313), FT complement(AL356261.23:7377..7537), FT complement(AL356261.23:3795..3975), FT complement(5940174..5940299),complement(5937147..5937358), FT complement(5934934..5935154),complement(5934531..5934717), FT complement(5933312..5933395),complement(5927800..5927956), FT complement(5927090..5927175),complement(5926433..5926518), FT complement(5925162..5925333),complement(5924398..5924577), FT complement(5923950..5924093),complement(5922878..5923465)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-001" FT /product="nephronophthisis 4" FT /note="match: ESTs: Em:AI769224.1 Em:AL043313.2 FT Em:AW027145.1 Em:AW139370.1 Em:AW188967.1 Em:AW241964.1 FT Em:AW338245.1 Em:BE388266.1 Em:BE391252.1 Em:BE779125.1 FT Em:BF204944.1 Em:BF871526.1 Em:BF915896.1 Em:BF931939.1 FT Em:BG827466.1 Em:BI551869.1 Em:BI559867.1 Em:BM008418.1 FT Em:BM470285.1 Em:BM717147.1 Em:BM803649.1 Em:BU738621.1 FT Em:CB152147.1" FT /note="match: cDNAs: Em:AB014573.1 Em:AF537130.1 FT Em:AY118228.1" FT mRNA join(AL035406.25:151021..151201, FT complement(AL356261.23:85596..85768), FT complement(AL356261.23:83808..83872), FT complement(AL356261.23:78303..78458), FT complement(AL356261.23:69209..69345), FT complement(AL356261.23:64579..64760), FT complement(AL356261.23:63613..63739), FT complement(AL356261.23:49656..49838), FT complement(AL356261.23:44158..44296), FT complement(AL356261.23:22141..22292), FT complement(AL356261.23:21801..21992), FT complement(AL356261.23:21126..21313), FT complement(AL356261.23:7377..7537), FT complement(AL356261.23:3795..3975), FT complement(5940174..5940299),complement(5937147..5937358), FT complement(5934934..5935154),complement(5934531..5934717), FT complement(5933312..5933395),complement(5927800..5927956), FT complement(5927090..5927175),complement(5926433..5926518), FT complement(5925162..5925333),complement(5924398..5924577), FT complement(5923950..5924093),complement(5922871..5923465)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-009" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AK124074.1" FT CDS join(AL035406.25:157156..157290, FT complement(AL356261.23:94779..94922), FT complement(AL356261.23:85596..85768), FT complement(AL356261.23:83808..83872), FT complement(AL356261.23:78303..78458), FT complement(AL356261.23:69209..69345), FT complement(AL356261.23:64579..64760), FT complement(AL356261.23:63613..63739), FT complement(AL356261.23:49656..49838), FT complement(AL356261.23:44158..44296), FT complement(AL356261.23:25661..25722), FT complement(AL356261.23:23624..23731), FT complement(AL356261.23:22141..22289), FT complement(AL356261.23:21801..21992), FT complement(AL356261.23:21126..21313), FT complement(AL356261.23:7377..7537), FT complement(AL356261.23:3795..3975), FT complement(5940174..5940299),complement(5937147..5937358), FT complement(5934934..5935154),complement(5934531..5934717), FT complement(5933312..5933395),complement(5927800..5927956), FT complement(5927090..5927175),complement(5926433..5926518), FT complement(5925162..5925333),complement(5924398..5924577), FT complement(5923950..5924093),complement(5923325..5923465)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-001" FT /standard_name="OTTHUMP00000000745" FT /product="nephronophthisis 4" FT /note="match: proteins: Sw:O75161 Sw:P59240 Tr:Q80UJ2 FT Tr:Q8CGY9" FT /protein_id="CAH72673.1" FT /translation="MNDWHRIFTQNVLVPPHPQRARQPWKESTAFQCVLKWLDGPVIRQ FT GVLEVLSEVECHLRVSFFDVTYRHFFGRTWKTTVKPTKRPPSRIVFNEPLYFHTSLNHP FT HIVAVVEVVAEGKKRDGSLQTLSCGFGILRIFSNQPDSPISASQDKRLRLYHGTPRALL FT HPLLQDPAEQNRHMTLIENCSLQYTLKPHPALEPAFHLLPENLLVSGLQQIPGLLPAHG FT ESGDALRKPRLQKPITGHLDDLFFTLYPSLEKFEEELLELHVQDHFQEGCGPLDGGALE FT ILERRLRVGVHNGLGFVQRPQVVVLVPEMDVALTRSASFSRKVVSSSKTSSGSQALVLR FT SRLRLPEMVGHPAFAVIFQLEYVFSSPAGVDGNAASVTSLSNLACMHMVRWAVWNPLLE FT ADSGRVTLPLQGGIQPNPSHCLVYKVPSASMSSEEVKQVESGTLRFQFSLGSEEHLDAP FT TEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLAASPRSPTQH FT CLARPTSQLPHGSQASPAQAEFPLEAGISHLEADLSQTSLVLETSIAEQLQELPFTPLH FT APIVVGTQTRSSAGQPSRASMVLLQSSGFPEILDANKQPAEAVSATEPVTFNPQKEESD FT CLQSNEMVLQFLAFSRVAQDCRGTSWPKTVYFTFQFYRFPPATTPRLQLVQLDEAGQPS FT SGALTHILVPVSRDGTFDAGSPGFQLRYMVGPGFLKPGERRCFARYLAVQTLQIDVWDG FT DSLLLIGSAAVQMKHLLRQGRPAVQASHELEVVATEYEQDNMVVSGDMLGFGRVKPIGV FT HSVVKGRLHLTLANVGHPCEQKVRGCSTLPPSRSRVISNDGASRFSGGSLLTTGSSRRK FT HVVQAQKLADVDSELAAMLLTHARQGKGPQDVSRESDATRRRKLERMRSVRLQEAGGDL FT GRRGTSVLVRQSVRTQHLRDLQVIAAYRERTKAESIASLLSLAITTEHTLHATLGVAEF FT FEFVLKNPHNTQHTVTVEIDNPELSVIVDSQEWRDFKGAAGLHTPVEEDMFHLRGSLAP FT QLYLRPHETAHVPFKFQSFSAGQLAMVQASPGLSNEKGMDAVSPWKSSAVPTKHAKVLF FT RASGGKPIAVLCLTVELQPHVVDQVFRFYHPELSFLKKAIRLPPWHTFPGAPVGMLGED FT PPVHVRCSDPNVICETQNVGPGEPRDIFLKVASGPSPEIKDFFVIIYSDRWLATPTQTW FT QVYLHSLQRVDVSCVAGQLTRLSLVLRGTQTVRKVRAFTSHPQELKTDPKGVFVLPPRG FT VQDLHVGVRPLRAGSRFVHLNLVDVDCHQLVASWLVCLCCRQPLISKAFEIMLAAGEGK FT GVNKRITYTNPYPSRRTFHLHSDHPELLRFREDSFQVGGGETYTIGLQFAPSQRVGEEE FT ILIYINDHEDKNEEAFCVKVIYQ" FT misc_feature 5945552..6043853 FT /note="annotated region of clone" FT mRNA complement(join(5946555..5947032,5947346..5947526, FT 5948520..5948670,5950928..5951088,5964677..5964864, FT 5965352..5965384)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-005" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AL117405.1" FT /note="match: ESTs: Em:AL044747.1" FT misc_feature 6007467..6007534 FT /note="Sequence from overlapping clone RP11-33M12 FT (AL356693). Assembly confirmed by restriction digest" FT misc_feature 6010646..6010663 FT /note="Sequence from AC026968 sequenced by WIBR" FT misc_feature 6027207 FT /note="Clone_right_end: RP11-33M12" FT misc_feature 6035966 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1100bp by restriction digest data" FT misc_feature 6039854 FT /note="Clone_left_end: RP1-233K16" FT mRNA join(AL035406.25:150972..151201,AL035406.25:157118..157290, FT complement(6038330..6038473),complement(6029147..6029319), FT complement(6027359..6027423),complement(6021854..6022009), FT complement(6012760..6012896),complement(6008130..6008311), FT complement(6007164..6007290),complement(5993207..5993389), FT complement(5987709..5987847),complement(5969212..5969273), FT complement(5967175..5967282),complement(5965692..5965840), FT complement(5965352..5965543),complement(5964677..5964864), FT complement(5950928..5951088),complement(5947346..5947526), FT complement(AL356693.37:67233..67358), FT complement(AL356693.37:66465..66751), FT complement(AL356693.37:64212..64417), FT complement(AL356693.37:63505..63642), FT complement(AL356693.37:63067..63197), FT complement(AL356693.37:61993..62213), FT complement(AL356693.37:61590..61776), FT complement(AL356693.37:60371..60454), FT complement(AL356693.37:54859..55015), FT complement(AL356693.37:54149..54234), FT complement(AL356693.37:53492..53577), FT complement(AL356693.37:52221..52392), FT complement(AL356693.37:51457..51636), FT complement(AL356693.37:51009..51152), FT complement(AL356693.37:49932..50524)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-002" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:BC040520.1" FT mRNA join(AL035406.25:150974..151201,AL035406.25:157118..157290, FT complement(6038330..6038473),complement(6029147..6029319), FT complement(6027359..6027423),complement(6021854..6022009), FT complement(6012760..6012896),complement(6008130..6008311), FT complement(6007164..6007290),complement(5993207..5993389), FT complement(5987709..5987847),complement(5969212..5969273), FT complement(5967175..5967282),complement(5965692..5965840), FT complement(5965352..5965543),complement(5964677..5964864), FT complement(5950928..5951088),complement(5947346..5947526), FT complement(AL356693.37:67233..67358), FT complement(AL356693.37:64206..64417), FT complement(AL356693.37:61993..62213), FT complement(AL356693.37:61590..61776), FT complement(AL356693.37:60371..60454), FT complement(AL356693.37:54859..55015), FT complement(AL356693.37:54149..54234), FT complement(AL356693.37:53492..53577), FT complement(AL356693.37:52221..52392), FT complement(AL356693.37:51457..51636), FT complement(AL356693.37:51009..51152), FT complement(AL356693.37:49937..50524)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-001" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AB014573.1 Em:AF537130.1 FT Em:AY118228.1" FT /note="match: ESTs: Em:AI769224.1 Em:AL043313.2 FT Em:AW027145.1 Em:AW139370.1 Em:AW188967.1 Em:AW241964.1 FT Em:AW338245.1 Em:BE388266.1 Em:BE391252.1 Em:BE779125.1 FT Em:BF204944.1 Em:BF871526.1 Em:BF915896.1 Em:BF931939.1 FT Em:BG827466.1 Em:BI551869.1 Em:BI559867.1 Em:BM008418.1 FT Em:BM470285.1 Em:BM717147.1 Em:BM803649.1 Em:BU738621.1 FT Em:CB152147.1" FT mRNA join(AL035406.25:151021..151201, FT complement(6029147..6029319),complement(6027359..6027423), FT complement(6021854..6022009),complement(6012760..6012896), FT complement(6008130..6008311),complement(6007164..6007290), FT complement(5993207..5993389),complement(5987709..5987847), FT complement(5965692..5965843),complement(5965352..5965543), FT complement(5964677..5964864),complement(5950928..5951088), FT complement(5947346..5947526), FT complement(AL356693.37:67233..67358), FT complement(AL356693.37:64206..64417), FT complement(AL356693.37:61993..62213), FT complement(AL356693.37:61590..61776), FT complement(AL356693.37:60371..60454), FT complement(AL356693.37:54859..55015), FT complement(AL356693.37:54149..54234), FT complement(AL356693.37:53492..53577), FT complement(AL356693.37:52221..52392), FT complement(AL356693.37:51457..51636), FT complement(AL356693.37:51009..51152), FT complement(AL356693.37:49930..50524)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-009" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AK124074.1" FT CDS join(AL035406.25:157156..157290, FT complement(6038330..6038473),complement(6029147..6029319), FT complement(6027359..6027423),complement(6021854..6022009), FT complement(6012760..6012896),complement(6008130..6008311), FT complement(6007164..6007290),complement(5993207..5993389), FT complement(5987709..5987847),complement(5969212..5969273), FT complement(5967175..5967282),complement(5965692..5965840), FT complement(5965352..5965543),complement(5964677..5964864), FT complement(5950928..5951088),complement(5947346..5947526), FT complement(AL356693.37:67233..67358), FT complement(AL356693.37:64206..64417), FT complement(AL356693.37:61993..62213), FT complement(AL356693.37:61590..61776), FT complement(AL356693.37:60371..60454), FT complement(AL356693.37:54859..55015), FT complement(AL356693.37:54149..54234), FT complement(AL356693.37:53492..53577), FT complement(AL356693.37:52221..52392), FT complement(AL356693.37:51457..51636), FT complement(AL356693.37:51009..51152), FT complement(AL356693.37:50384..50524)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-001" FT /standard_name="OTTHUMP00000000745" FT /product="nephronophthisis 4" FT /note="match: proteins: Sw:O75161 Sw:P59240 Tr:Q80UJ2 FT Tr:Q8CGY9" FT /protein_id="CAI14749.1" FT /translation="MNDWHRIFTQNVLVPPHPQRARQPWKESTAFQCVLKWLDGPVIRQ FT GVLEVLSEVECHLRVSFFDVTYRHFFGRTWKTTVKPTKRPPSRIVFNEPLYFHTSLNHP FT HIVAVVEVVAEGKKRDGSLQTLSCGFGILRIFSNQPDSPISASQDKRLRLYHGTPRALL FT HPLLQDPAEQNRHMTLIENCSLQYTLKPHPALEPAFHLLPENLLVSGLQQIPGLLPAHG FT ESGDALRKPRLQKPITGHLDDLFFTLYPSLEKFEEELLELHVQDHFQEGCGPLDGGALE FT ILERRLRVGVHNGLGFVQRPQVVVLVPEMDVALTRSASFSRKVVSSSKTSSGSQALVLR FT SRLRLPEMVGHPAFAVIFQLEYVFSSPAGVDGNAASVTSLSNLACMHMVRWAVWNPLLE FT ADSGRVTLPLQGGIQPNPSHCLVYKVPSASMSSEEVKQVESGTLRFQFSLGSEEHLDAP FT TEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLAASPRSPTQH FT CLARPTSQLPHGSQASPAQAEFPLEAGISHLEADLSQTSLVLETSIAEQLQELPFTPLH FT APIVVGTQTRSSAGQPSRASMVLLQSSGFPEILDANKQPAEAVSATEPVTFNPQKEESD FT CLQSNEMVLQFLAFSRVAQDCRGTSWPKTVYFTFQFYRFPPATTPRLQLVQLDEAGQPS FT SGALTHILVPVSRDGTFDAGSPGFQLRYMVGPGFLKPGERRCFARYLAVQTLQIDVWDG FT DSLLLIGSAAVQMKHLLRQGRPAVQASHELEVVATEYEQDNMVVSGDMLGFGRVKPIGV FT HSVVKGRLHLTLANVGHPCEQKVRGCSTLPPSRSRVISNDGASRFSGGSLLTTGSSRRK FT HVVQAQKLADVDSELAAMLLTHARQGKGPQDVSRESDATRRRKLERMRSVRLQEAGGDL FT GRRGTSVLVRQSVRTQHLRDLQVIAAYRERTKAESIASLLSLAITTEHTLHATLGVAEF FT FEFVLKNPHNTQHTVTVEIDNPELSVIVDSQEWRDFKGAAGLHTPVEEDMFHLRGSLAP FT QLYLRPHETAHVPFKFQSFSAGQLAMVQASPGLSNEKGMDAVSPWKSSAVPTKHAKVLF FT RASGGKPIAVLCLTVELQPHVVDQVFRFYHPELSFLKKAIRLPPWHTFPGAPVGMLGED FT PPVHVRCSDPNVICETQNVGPGEPRDIFLKVASGPSPEIKDFFVIIYSDRWLATPTQTW FT QVYLHSLQRVDVSCVAGQLTRLSLVLRGTQTVRKVRAFTSHPQELKTDPKGVFVLPPRG FT VQDLHVGVRPLRAGSRFVHLNLVDVDCHQLVASWLVCLCCRQPLISKAFEIMLAAGEGK FT GVNKRITYTNPYPSRRTFHLHSDHPELLRFREDSFQVGGGETYTIGLQFAPSQRVGEEE FT ILIYINDHEDKNEEAFCVKVIYQ" FT misc_feature complement(6043854..6203504) FT /note="annotated region of clone" FT mRNA complement(join(6165143..6165487,6166294..6166347, FT 6166676..6166839,6169855..6170050,6170454..6170586, FT 6171835..6171943,6172200..6172337,6172969..6173058, FT 6181165..6181297,6181554..6181633,6184008..6184167, FT 6184577..6184721,6185160..6185293,6185584..6185672, FT 6185826..6185918,6186632..6186806,6188106..6188278, FT 6188559..6188669,6188898..6189129,6190208..6190388, FT 6191691..6191799)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-005" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AK046510.1 Em:AK126012.1" FT CDS complement(join(6165428..6165487,6166294..6166347, FT 6166676..6166839,6169855..6170050,6170454..6170586, FT 6171835..6171943,6172200..6172337,6172969..6173058, FT 6181165..6181297,6181554..6181633,6184008..6184167, FT 6184577..6184721,6185160..6185293,6185584..6185672, FT 6185826..6185918,6186632..6186806,6188106..6188278, FT 6188559..6188669,6188898..6189087)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-005" FT /standard_name="OTTHUMP00000001139" FT /product="chromodomain helicase DNA binding protein 5" FT /protein_id="CAI19883.1" FT /translation="MIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQE FT LDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNK FT DVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVER FT EIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDEL FT SDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGF FT NARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGA FT ETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKSGEV FT ISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEKDPGAQKPRQPLEVQALPAALDR FT VESEDKHESPASKERAREERPEETEKAPPSPEQLPREEVLPEKEKILDKLELSLIHSRG FT DSSELRPDDTKAEEKEPIETQQNGDKEEDDEGKKEDKKGKFKFMFNIADGGFTELHTLW FT QNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEVHK FT GNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAE FT SHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSE FT RSILSRLTNRAGDPTIQQISSRPRDFPVLQRSFPAEPRLPGHLPDPHGREKLPPF" FT mRNA complement(join(6185594..6185672,6185826..6185918, FT 6186632..6186806,6187143..6187224,6188106..6188278, FT 6188559..6188602)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-006" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: ESTs: Em:AL045330.1" FT misc_feature complement(6180798) FT /note="Tandem repeat. Forced join. gap sized to be 1-200bp FT by restriciton digest" FT mRNA complement(join(6165141..6165487,6166294..6166347, FT 6166676..6166832)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-003" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: ESTs: Em:AA435597.1 Em:AA774900.1 FT Em:AV275809.2 Em:BQ338811.1 Em:R88567.1" FT polyA_signal complement(6161867..6161872) FT polyA_site complement(6161852) FT polyA_site 6161253 FT polyA_signal 6161224..6161229 FT mRNA join(6156316..6156816,6157329..6157417,6158545..6158870) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-011" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:AL540655.2" FT polyA_site 6146423 FT polyA_signal 6146404..6146409 FT mRNA join(6145260..6145308,6145800..6146423) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-012" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:BF514486.1 Em:BM974920.1 FT Em:H96854.1" FT mRNA join(6132807..6132858,6133793..6133830,6142255..6142334, FT 6145264..6145308,6145800..6145853,6146218..6146422) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-013" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:AI090677.1" FT CDS join(6100629..6100705,6101891..6101932,6132815..6132858, FT 6133793..6133830,6142255..6142334,6145264..6145308, FT 6159883..6160078) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-003" FT /standard_name="OTTHUMP00000000876" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /protein_id="CAI19884.1" FT /translation="MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKS FT GLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIK FT KKGWRQRGERAGQARVTPPCSLGRRARDASKSAGAGCHLQAQACVPSSTQALQTTRGRA FT PLKPPPPLAS" FT CDS join(6100629..6100705,6101891..6101932,6132815..6132858, FT 6133793..6133830,6142255..6142334,6145264..6145308, FT 6147527..6147571,6149068..6149111,6150449..6150535, FT 6154460..6154545,6155383..6155503,6155590..6155684, FT 6156696..6156816,6157329..6157417,6158545..6158634) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-006" FT /standard_name="OTTHUMP00000000874" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /protein_id="CAC08512.1" FT /translation="MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKS FT GLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIK FT KKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPN FT TPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQR FT EKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEE FT GRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVL FT PKLSSSIIHEIDSILGNKPYSKKDYRS" FT CDS join(6100629..6100705,6132815..6132858,6133793..6133830, FT 6142255..6142334,6145264..6145308,6147527..6147571, FT 6149068..6149111,6150449..6150535,6154460..6154545, FT 6155383..6155503,6155590..6155684,6156696..6156816, FT 6157329..6157417,6158545..6158634) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-002" FT /standard_name="OTTHUMP00000000875" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /protein_id="CAI19885.1" FT /translation="MYPESTTGSPARLSLRQTGSPGMIYRNLGKSGLRVSCLGLGTWVT FT FGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTK FT IFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVI FT NQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKI FT GVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAI FT AERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSI FT LGNKPYSKKDYRS" FT CDS join(6100629..6100705,6132815..6132858,6133793..6133830, FT 6142255..6142334,6145264..6145308,6147527..6147571, FT 6149068..6149111,6150449..6150535,6154460..6154545, FT 6155383..6155503,6155590..>6155685) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-007" FT /standard_name="OTTHUMP00000000878" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /protein_id="CAI19887.1" FT /translation="MYPESTTGSPARLSLRQTGSPGMIYRNLGKSGLRVSCLGLGTWVT FT FGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTK FT IFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVI FT NQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKI FT GVGAMTWSPLACGIVSGKYDSGIPPYSRASLK" FT CDS join(6100629..6100705,6101891..6101932,6132815..6132858, FT 6133793..6133830,6142255..6142334,6145264..6145308, FT 6147527..6147571,6149068..6149111,6150449..6150535, FT 6154460..6154545,6155383..6155503,6155590..>6155641) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-010" FT /standard_name="OTTHUMP00000000885" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /protein_id="CAI19886.1" FT /translation="MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKS FT GLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIK FT KKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPN FT TPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQR FT EKVEVQLPELFHKIGVGAMTWSPLACGIVSG" FT CDS join(6100629..6100705,6132815..6132858,6133793..6133830, FT 6142255..6142334,6145264..>6145309) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-008" FT /standard_name="OTTHUMP00000000879" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /protein_id="CAI19888.1" FT /translation="MYPESTTGSPARLSLRQTGSPGMIYRNLGKSGLRVSCLGLGTWVT FT FGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWR" FT CDS join(6100629..6100705,6101891..6101932,6132815..>6132850) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-009" FT /standard_name="OTTHUMP00000000884" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /protein_id="CAI19889.1" FT /translation="MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKS FT GLRVSCL" FT mRNA join(6095977..6096108,6100577..6100705,6101228..6101822) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-014" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:BU855894.1" FT mRNA join(6094343..6094854,6100577..6100705,6101891..6101932, FT 6132815..6132858,6133793..6133830,6142255..6142334, FT 6145264..6145308,6147527..6147571,6149068..6149111, FT 6150449..6150535,6154460..6154545,6155383..6155503, FT 6155590..6155684,6156696..6156816,6157329..6157417, FT 6158545..6161239) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-006" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: cDNAs: Em:AK124696.1" FT mRNA join(6087357..6087519,6100577..6100705,6132815..6132858, FT 6133793..6133830,6142255..6142334,6145264..>6145309) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-008" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:BM148800.1" FT mRNA join(6086360..6086505,6100577..6100705,6132815..6132858, FT 6133793..6133830,6142255..6142334,6145264..6145308, FT 6147527..6147571,6149068..6149111,6150449..6150535, FT 6154460..6154545,6155383..6155503,6155590..>6155685) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-007" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:AL121464.1 Em:AL121511.1 FT Em:AL560646.2 Em:AL583176.2 Em:AU077252.1 Em:BE243023.1 FT Em:BE243151.1 Em:BI259546.1 Em:BM146591.1 Em:BM147117.1 FT Em:BM147158.1 Em:BM147340.1 Em:BM147705.1 Em:BM149685.1 FT Em:BM150347.1 Em:BM152189.1 Em:BM152495.1 Em:BM152593.1 FT Em:BM152777.1 Em:BM457719.1 Em:BM469118.1 Em:BQ073672.1 FT Em:BU149360.1 Em:BU527642.1 Em:CA487301.1" FT mRNA join(6086360..6086505,6100577..6100705,6101891..6101932, FT 6132815..6132858,6133793..6133830,6142255..6142334, FT 6145264..6145308,6147527..6147571,6149068..6149111, FT 6150449..6150535,6154460..6154545,6155383..6155503, FT 6155590..>6155641) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-010" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:AW407792.1 Em:BI907219.1 FT Em:BM146977.1 Em:BM147772.1 Em:BM148082.1 Em:BM148790.1 FT Em:BM467561.1 Em:BQ216865.1" FT mRNA join(AL031847.17:129740..129918,AL031847.17:141586..141713, FT AL031847.17:150348..150527,AL031847.17:154146..154264, FT AL031847.17:154965..155203,AL031847.17:157327..157451, FT AL031847.17:158708..158831,AL031847.17:160451..160617, FT AL031847.17:160788..161009,AL031847.17:162992..163198, FT AL031847.17:163440..163651,AL031847.17:165708..165839, FT AL031847.17:165932..166040,complement(6202474..6202665), FT complement(6202188..6202388),complement(6196788..6196925), FT complement(6196577..6196698),complement(6195290..6195463), FT complement(6194778..6194919),complement(6194188..6194319), FT complement(6191691..6191808),complement(6190264..6190388), FT complement(6188898..6189129),complement(6188559..6188669), FT complement(6188106..6188278),complement(6186632..6186806), FT complement(6185826..6185918),complement(6185584..6185672), FT complement(6185160..6185293),complement(6184577..6184721), FT complement(6184008..6184167),complement(6181554..6181633), FT complement(6181165..6181297),complement(6172969..6173058), FT complement(6172200..6172337),complement(6171835..6171943), FT complement(6170454..6170586),complement(6169855..6170050), FT complement(6166676..6166839),complement(6166455..6166569), FT complement(6166294..6166347),complement(6161853..6165487)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-001" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AB007913.1 Em:AF425231.1 FT Em:AL117491.1" FT /note="match: ESTs: Em:AA394017.1 Em:AA435597.1 FT Em:AI075932.1 Em:AI369154.1 Em:AL044919.1 Em:AL046111.2 FT Em:AL134392.1 Em:AL519188.1 Em:AL519189.2 Em:AW005809.1 FT Em:BE466693.1 Em:BE590137.1 Em:BE621343.1 Em:BF918547.1 FT Em:BF950965.1 Em:BF950966.1 Em:BI603565.1 Em:BI603800.1 FT Em:BI753222.1 Em:BI756485.1 Em:BI916428.1 Em:BI919134.1 FT Em:BM713651.1 Em:BM714801.1 Em:BM930129.1 Em:BQ067813.1 FT Em:BQ365945.1 Em:BU178652.1 Em:BU193325.1 Em:BU738969.1 FT Em:BU740688.1 Em:BX096438.1 Em:BX432977.1 Em:BX432978.1 FT Em:BX451393.1 Em:CB724019.1 Em:F11047.1 Em:R88567.1" FT CDS join(AL031847.17:129840..129918,AL031847.17:141586..141713, FT AL031847.17:150348..150527,AL031847.17:154146..154264, FT AL031847.17:154965..155203,AL031847.17:157327..157451, FT AL031847.17:158708..158831,AL031847.17:160451..160617, FT AL031847.17:160788..161009,AL031847.17:162992..163198, FT AL031847.17:163440..163651,AL031847.17:165708..165839, FT AL031847.17:165932..166040,complement(6202474..6202665), FT complement(6202188..6202388),complement(6196788..6196925), FT complement(6196577..6196698),complement(6195290..6195463), FT complement(6194778..6194919),complement(6194188..6194319), FT complement(6191691..6191808),complement(6190264..6190388), FT complement(6188898..6189129),complement(6188559..6188669), FT complement(6188106..6188278),complement(6186632..6186806), FT complement(6185826..6185918),complement(6185584..6185672), FT complement(6185160..6185293),complement(6184577..6184721), FT complement(6184008..6184167),complement(6181554..6181633), FT complement(6181165..6181297),complement(6172969..6173058), FT complement(6172200..6172337),complement(6171835..6171943), FT complement(6170454..6170586),complement(6169855..6170050), FT complement(6166676..6166839),complement(6166455..6166569), FT complement(6166340..6166347)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-001" FT /standard_name="OTTHUMP00000001137" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: proteins: Sw:Q8TDI0" FT /protein_id="CAI19891.1" FT /translation="MRGPVGTEEELPRLFAEEMENEDEMSEEEDGGLEAFDDFFPVEPV FT SLPKKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLK FT DKKEKKAKRKKKDEDEDDNDDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKA FT FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTI FT SPPLAVSPPQVPQPVPIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKTAGLKFRFGGI FT SNKRKKGSSSEEDEREESDFDSASIHSASVRSECSAALGKKSKRRRKKKRIDDGDGYET FT DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDD FT DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCP FT RCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAG FT LSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYA FT KMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYD FT NLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYID FT STGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYL FT VSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMK FT KEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYK FT LLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLR FT RLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDL FT KKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQ FT MTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGI FT NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM FT MLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSS FT KGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEY FT LSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGK FT RIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKS FT DRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE FT KEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV FT NGKYSTPDLIPEGPEGKKSGEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEK FT DPGAQKPRQPLEVQALPAALDRVESEDKHESPASKERAREERPEETEKAPPSPEQLPRE FT EVLPEKEKILDKLELSLIHSRGDSSELRPDDTKAEEKEPIETQQNGDKEEDDEGKKEDK FT KGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARW FT QDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMT FT QDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKAD FT VTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYSNNFGPNFRG FT PGPGGIVNYNQMPLGPYVTDI" FT mRNA join(AL031847.17:129840..129918,AL031847.17:141586..141713, FT AL031847.17:150348..150527,AL031847.17:154146..154264, FT AL031847.17:154965..155203,AL031847.17:157327..157451, FT AL031847.17:158708..158831,AL031847.17:160451..160617, FT AL031847.17:160788..161009,AL031847.17:162992..163198, FT AL031847.17:163440..163651,AL031847.17:165708..165839, FT AL031847.17:165932..166040,complement(6202474..6202665), FT complement(6202188..6202388),complement(6196788..6196925), FT complement(6196577..6196698),complement(6195290..6195463), FT complement(6194778..6194919),complement(6194188..6194319), FT complement(6191691..6191808),complement(6190264..6190388), FT complement(6189100..6189129),complement(6181554..6181633), FT complement(6181165..6181297),complement(6172969..6173058), FT complement(6172200..6172337),complement(6171835..6171943), FT complement(6170454..6170586),complement(6169855..6170050), FT complement(6166676..6166839),complement(6166455..6166569), FT complement(6166294..6166347),complement(6165151..6165487)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-002" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AK127046.1" FT mRNA join(6052761..6052848,6100577..6100705,6132815..6132858, FT 6133793..6133830,6142255..6142334,6145264..6145308, FT 6147527..6147571,6149068..6149111,6150449..6150535, FT 6154460..6154545,6155383..6155503,6155590..6155684, FT 6156696..6156816,6157329..6157417,6158545..6158634) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-002" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: cDNAs: Em:AF044253.1 Em:AF247702.2" FT mRNA join(6052423..6052848,6100577..6100705,6101891..6101932, FT 6132815..6132858,6133793..6133830,6142255..6142334, FT 6145264..6145308,6147527..6147571,6149068..6149111, FT 6150449..6150535,6154460..6154545,6155383..6155503, FT 6155590..6155684,6156696..6156816,6157329..6157417, FT 6158545..6161253) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-001" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:AI124844.1 Em:AI436084.1 FT Em:AL520102.2 Em:AL520103.2 Em:AL527523.2 Em:AL578286.2 FT Em:AL582057.2 Em:AL583175.2 Em:AW025078.1 Em:BF882564.1 FT Em:BF882571.1 Em:BF975247.1 Em:BG388339.1 Em:BG391172.1 FT Em:BG705422.1 Em:BG708403.1 Em:BG760324.1 Em:BI550709.1 FT Em:BI669328.1 Em:BI757087.1 Em:BI772395.1 Em:BI818654.1 FT Em:BI820393.1 Em:BM145792.1 Em:BM547092.1 Em:BM669311.1 FT Em:BM923137.1 Em:BM925038.1 Em:BM926190.1 Em:BM974095.1 FT Em:BQ053241.1 Em:BQ057694.1 Em:BQ183094.1 Em:BQ683921.1 FT Em:BQ962307.1 Em:BX370696.1 Em:CD368448.1" FT /note="match: cDNAs: Em:AF247701.2 Em:U33429.1 Em:X76724.1" FT mRNA join(6052766..6052848,6100577..6100705,6101891..6101932, FT 6132815..6132858,6133793..6133907) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-005" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:CB113547.1" FT mRNA join(6052771..6052848,6078695..6078895,6100577..6100705, FT 6101891..6101932,6132815..>6132850) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-009" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:BM823724.1" FT mRNA join(6052733..6052848,6055923..6056144,6067499..6067720) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-004" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:BG702403.1 Em:BM755469.1 FT Em:BQ223090.1" FT mRNA complement(join(AL356693.37:49932..50524, FT AL356693.37:51009..51152,AL356693.37:51457..51636, FT AL356693.37:52221..52392,AL356693.37:53492..53577, FT AL356693.37:54149..54234,AL356693.37:54859..55015, FT AL356693.37:60371..60454,AL356693.37:61590..61776, FT AL356693.37:61993..62213,AL356693.37:63067..63197, FT AL356693.37:63505..63642,AL356693.37:64212..64417, FT AL356693.37:66465..66751,AL356693.37:67233..67358, FT AL356261.23:3795..3975,AL356261.23:7377..7537, FT AL356261.23:21126..21313,AL356261.23:21801..21992, FT AL356261.23:22141..22289,AL356261.23:23624..23731, FT AL356261.23:25661..25722,AL356261.23:44158..44296, FT AL356261.23:49656..49838,AL356261.23:63613..63739, FT AL356261.23:64579..64760,AL356261.23:69209..69345, FT AL356261.23:78303..78458,AL356261.23:83808..83872, FT AL356261.23:85596..85768,AL356261.23:94779..94922, FT 6046215..6046387,6052304..6052533)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-002" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:BC040520.1" FT mRNA complement(join(AL356693.37:49937..50524, FT AL356693.37:51009..51152,AL356693.37:51457..51636, FT AL356693.37:52221..52392,AL356693.37:53492..53577, FT AL356693.37:54149..54234,AL356693.37:54859..55015, FT AL356693.37:60371..60454,AL356693.37:61590..61776, FT AL356693.37:61993..62213,AL356693.37:64206..64417, FT AL356693.37:67233..67358,AL356261.23:3795..3975, FT AL356261.23:7377..7537,AL356261.23:21126..21313, FT AL356261.23:21801..21992,AL356261.23:22141..22289, FT AL356261.23:23624..23731,AL356261.23:25661..25722, FT AL356261.23:44158..44296,AL356261.23:49656..49838, FT AL356261.23:63613..63739,AL356261.23:64579..64760, FT AL356261.23:69209..69345,AL356261.23:78303..78458, FT AL356261.23:83808..83872,AL356261.23:85596..85768, FT AL356261.23:94779..94922,6046215..6046387, FT 6052304..6052531)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-001" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AB014573.1 Em:AF537130.1 FT Em:AY118228.1" FT /note="match: ESTs: Em:AI769224.1 Em:AL043313.2 FT Em:AW027145.1 Em:AW139370.1 Em:AW188967.1 Em:AW241964.1 FT Em:AW338245.1 Em:BE388266.1 Em:BE391252.1 Em:BE779125.1 FT Em:BF204944.1 Em:BF871526.1 Em:BF915896.1 Em:BF931939.1 FT Em:BG827466.1 Em:BI551869.1 Em:BI559867.1 Em:BM008418.1 FT Em:BM470285.1 Em:BM717147.1 Em:BM803649.1 Em:BU738621.1 FT Em:CB152147.1" FT mRNA complement(join(AL356693.37:49930..50524, FT AL356693.37:51009..51152,AL356693.37:51457..51636, FT AL356693.37:52221..52392,AL356693.37:53492..53577, FT AL356693.37:54149..54234,AL356693.37:54859..55015, FT AL356693.37:60371..60454,AL356693.37:61590..61776, FT AL356693.37:61993..62213,AL356693.37:64206..64417, FT AL356693.37:67233..67358,AL356261.23:3795..3975, FT AL356261.23:7377..7537,AL356261.23:21126..21313, FT AL356261.23:21801..21992,AL356261.23:22141..22292, FT AL356261.23:44158..44296,AL356261.23:49656..49838, FT AL356261.23:63613..63739,AL356261.23:64579..64760, FT AL356261.23:69209..69345,AL356261.23:78303..78458, FT AL356261.23:83808..83872,AL356261.23:85596..85768, FT 6052304..6052484)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-009" FT /product="nephronophthisis 4" FT /note="match: cDNAs: Em:AK124074.1" FT mRNA join(6051526..6051616,6100577..6100705,6101891..6101932, FT 6132815..6132858,6133793..6133830,6142255..6142334, FT 6145264..6145308,6159883..6160235) FT /gene="KCNAB2" FT /locus_tag="RP1-233K16.1-003" FT /product="potassium voltage-gated channel, shaker-related FT subfamily, beta member 2" FT /note="match: ESTs: Em:BG720519.1" FT CDS complement(join(AL356693.37:50384..50524, FT AL356693.37:51009..51152,AL356693.37:51457..51636, FT AL356693.37:52221..52392,AL356693.37:53492..53577, FT AL356693.37:54149..54234,AL356693.37:54859..55015, FT AL356693.37:60371..60454,AL356693.37:61590..61776, FT AL356693.37:61993..62213,AL356693.37:64206..64417, FT AL356693.37:67233..67358,AL356261.23:3795..3975, FT AL356261.23:7377..7537,AL356261.23:21126..21313, FT AL356261.23:21801..21992,AL356261.23:22141..22289, FT AL356261.23:23624..23731,AL356261.23:25661..25722, FT AL356261.23:44158..44296,AL356261.23:49656..49838, FT AL356261.23:63613..63739,AL356261.23:64579..64760, FT AL356261.23:69209..69345,AL356261.23:78303..78458, FT AL356261.23:83808..83872,AL356261.23:85596..85768, FT AL356261.23:94779..94922,6046215..6046349)) FT /gene="NPHP4" FT /locus_tag="RP11-33M12.1-001" FT /standard_name="OTTHUMP00000000745" FT /product="nephronophthisis 4" FT /note="match: proteins: Sw:O75161 Sw:P59240 Tr:Q80UJ2 FT Tr:Q8CGY9" FT /protein_id="CAI19892.1" FT /translation="MNDWHRIFTQNVLVPPHPQRARQPWKESTAFQCVLKWLDGPVIRQ FT GVLEVLSEVECHLRVSFFDVTYRHFFGRTWKTTVKPTKRPPSRIVFNEPLYFHTSLNHP FT HIVAVVEVVAEGKKRDGSLQTLSCGFGILRIFSNQPDSPISASQDKRLRLYHGTPRALL FT HPLLQDPAEQNRHMTLIENCSLQYTLKPHPALEPAFHLLPENLLVSGLQQIPGLLPAHG FT ESGDALRKPRLQKPITGHLDDLFFTLYPSLEKFEEELLELHVQDHFQEGCGPLDGGALE FT ILERRLRVGVHNGLGFVQRPQVVVLVPEMDVALTRSASFSRKVVSSSKTSSGSQALVLR FT SRLRLPEMVGHPAFAVIFQLEYVFSSPAGVDGNAASVTSLSNLACMHMVRWAVWNPLLE FT ADSGRVTLPLQGGIQPNPSHCLVYKVPSASMSSEEVKQVESGTLRFQFSLGSEEHLDAP FT TEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLAASPRSPTQH FT CLARPTSQLPHGSQASPAQAEFPLEAGISHLEADLSQTSLVLETSIAEQLQELPFTPLH FT APIVVGTQTRSSAGQPSRASMVLLQSSGFPEILDANKQPAEAVSATEPVTFNPQKEESD FT CLQSNEMVLQFLAFSRVAQDCRGTSWPKTVYFTFQFYRFPPATTPRLQLVQLDEAGQPS FT SGALTHILVPVSRDGTFDAGSPGFQLRYMVGPGFLKPGERRCFARYLAVQTLQIDVWDG FT DSLLLIGSAAVQMKHLLRQGRPAVQASHELEVVATEYEQDNMVVSGDMLGFGRVKPIGV FT HSVVKGRLHLTLANVGHPCEQKVRGCSTLPPSRSRVISNDGASRFSGGSLLTTGSSRRK FT HVVQAQKLADVDSELAAMLLTHARQGKGPQDVSRESDATRRRKLERMRSVRLQEAGGDL FT GRRGTSVLVRQSVRTQHLRDLQVIAAYRERTKAESIASLLSLAITTEHTLHATLGVAEF FT FEFVLKNPHNTQHTVTVEIDNPELSVIVDSQEWRDFKGAAGLHTPVEEDMFHLRGSLAP FT QLYLRPHETAHVPFKFQSFSAGQLAMVQASPGLSNEKGMDAVSPWKSSAVPTKHAKVLF FT RASGGKPIAVLCLTVELQPHVVDQVFRFYHPELSFLKKAIRLPPWHTFPGAPVGMLGED FT PPVHVRCSDPNVICETQNVGPGEPRDIFLKVASGPSPEIKDFFVIIYSDRWLATPTQTW FT QVYLHSLQRVDVSCVAGQLTRLSLVLRGTQTVRKVRAFTSHPQELKTDPKGVFVLPPRG FT VQDLHVGVRPLRAGSRFVHLNLVDVDCHQLVASWLVCLCCRQPLISKAFEIMLAAGEGK FT GVNKRITYTNPYPSRRTFHLHSDHPELLRFREDSFQVGGGETYTIGLQFAPSQRVGEEE FT ILIYINDHEDKNEEAFCVKVIYQ" FT misc_feature complement(6043953) FT /note="Clone_right_end: RP1-120G22" FT mRNA join(AL031847.17:163022..163198,AL031847.17:163440..163651, FT AL031847.17:165708..165839,AL031847.17:165932..166040, FT complement(6202474..6202665),complement(6202188..6202388), FT complement(6196788..6196925),complement(6196577..6196698), FT complement(6195290..6195463),complement(6194778..6194919), FT complement(6194188..6194319),complement(6191691..6191808), FT complement(6190264..6190388),complement(6188898..6189129), FT complement(6188559..6188669),complement(6188106..6188278), FT complement(6186632..6186806),complement(6185826..6185918), FT complement(6185584..6185672),complement(6185160..6185293), FT complement(6184577..6184721),complement(6184008..6184167), FT complement(6181554..6181633),complement(6181211..6181297), FT complement(6161853..6162153)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-007" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AK091386.1 Em:AX746951.1" FT CDS join(AL031847.17:163061..163198,AL031847.17:163440..163651, FT AL031847.17:165708..165839,AL031847.17:165932..166040, FT complement(6202474..6202665),complement(6202188..6202388), FT complement(6196788..6196925),complement(6196577..6196698), FT complement(6195290..6195463),complement(6194778..6194919), FT complement(6194188..6194319),complement(6191691..6191808), FT complement(6190264..6190388),complement(6188898..6189129), FT complement(6188559..6188669),complement(6188106..6188278), FT complement(6186632..6186806),complement(6185826..6185918), FT complement(6185584..6185672),complement(6185160..6185293), FT complement(6184577..6184721),complement(6184008..6184167), FT complement(6181554..6181633),complement(6181211..6181297), FT complement(6161980..6162153)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-007" FT /standard_name="OTTHUMP00000001140" FT /product="chromodomain helicase DNA binding protein 5" FT /protein_id="CAI19894.1" FT /translation="MVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAGLSYWHCSWVKEL FT QLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIK FT PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHREL FT MLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE FT GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWE FT REFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLT FT SYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNL FT EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA FT KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPV FT AAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL FT EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYD FT SDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLG FT SKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKK FT HGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVR FT EEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDAS FT QEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLAR FT VGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMR FT HLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPE FT GPEGKKSGEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEKDPGAQKPRQPLE FT VQALPAALDRVESEDKHESPASKERAREERPEQTPPAQAQLRGGRPLSPGTAPGWQREG FT PGLGARRARSPSQGGPGGGGSSFGSQAPL" FT mRNA join(AL031847.17:165759..165839,AL031847.17:165932..166040, FT complement(6202474..6202665),complement(6202188..6202388), FT complement(6196788..6196925),complement(6196577..6196698), FT complement(6195290..6195463),complement(6194778..6194919), FT complement(6194188..6194319),complement(6191691..6191808), FT complement(6190264..6190388),complement(6188898..6189129), FT complement(6188559..6188669),complement(6188106..6188278), FT complement(6186632..6186806),complement(6185826..6185918), FT complement(6185584..6185672),complement(6185160..6185293), FT complement(6184577..6184721),complement(6184008..6184167), FT complement(6181554..6181633),complement(6181165..6181297), FT complement(6173371..6173476),complement(6172969..6173058), FT complement(6172200..6172337),complement(6171835..6171943), FT complement(6170454..6170586),complement(6169855..6170050), FT complement(6166676..6166839),complement(6166294..6166347), FT complement(6165141..6165487)) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-004" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AL110281.1 Em:AL137693.1" FT misc_feature complement(6203505..6369922) FT /note="annotated region of clone" FT mRNA complement(join(6341313..6341346,6342784..6342856, FT 6354924..6355564)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-007" FT /product="acyl-CoA thioesterase 7" FT /note="match: ESTs: Em:AA780696.1 Em:BI017568.1" FT misc_feature complement(6333447..6333522) FT /note="Single clone region" FT mRNA complement(join(6318333..6318487,6319124..6319545)) FT /locus_tag="RP1-120G22.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF205088.1" FT mRNA complement(join(6307406..6310132,6310500..6310684, FT 6311398..6311590,6313778..6314207,6314610..6315073)) FT /gene="GPR153" FT /locus_tag="RP1-120G22.8-001" FT /product="G protein-coupled receptor 153" FT /note="match: ESTs: Em:AI051296.1 Em:AI937160.1 FT Em:AL535864.2 Em:AL539597.2 Em:AL540300.2 Em:AL566087.2 FT Em:AW006293.1 Em:AW182844.1 Em:BE905229.1 Em:BF973129.1 FT Em:BG255974.1 Em:BG286364.1 Em:BG678862.1 Em:BM454616.1 FT Em:BM680733.1 Em:BM718856.1 Em:BM854044.1 Em:BQ574577.1 FT Em:BQ575651.1 Em:BQ879126.1 Em:BU624941.1 Em:BU848658.1 FT Em:BU931054.1 Em:CA418643.1 Em:CA441930.1 Em:CB243960.1 FT Em:R36925.1 Em:T06138.1" FT /note="match: cDNAs: Em:AY255529.1 Em:BC029098.1 FT Em:BC037650.1" FT CDS complement(join(6310085..6310132,6310500..6310684, FT 6311398..6311590,6313778..6314207,6314610..6314965)) FT /gene="GPR153" FT /locus_tag="RP1-120G22.8-001" FT /standard_name="OTTHUMP00000001391" FT /product="G protein-coupled receptor 153" FT /note="match: proteins: Sw:Q8K0Z9" FT /protein_id="CAI19434.1" FT /translation="MSDERRLPGSAVGWLVCGGLSLLANAWGILSVGAKQKKWKPLEFL FT LCTLAATHMLNVAVPIATYSVVQLRRQRPDFEWNEGLCKVFVSTFYTLTLATCFSVTSL FT SYHRMWMVCWPVNYRLSNAKKQAVHTVMGIWMVSFILSALPAVGWHDTSERFYTHGCRF FT IVAEIGLGFGVCFLLLVGGSVAMGVICTAIALFQTLAVQVGRQADRRAFTVPTIVVEDA FT QGKRRSSIDGSEPAKTSLQTTGLVTTIVFIYDCLMGFPVLVVSFSSLRADASAPWMALC FT VLWCSVAQALLLPVFLWACDRYRADLKAVREKCMALMANDEESDDETSLEGGISPDLVL FT ERSLDYGYGGDFVALDRMAKYEISALEGGLPQLYPLRPLQEDKMQYLQGGEGFVPVSQE FT GSSG" FT mRNA join(AL031848.11:58437..59571,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324333..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-006" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AK057168.1 Em:BC017365.2" FT /note="match: ESTs: Em:AA448257.1 Em:AA994873.1 FT Em:AI090641.1 Em:AI126491.1 Em:AI203663.1 Em:AI539474.1 FT Em:AI805171.1 Em:AI827504.1 Em:AL535912.2 Em:AW183574.1 FT Em:BE294531.1 Em:BG324607.1 Em:BG332214.1 Em:BG338545.1 FT Em:BM742333.1 Em:BM743044.1 Em:BX102155.1 Em:BX362959.1 FT Em:BX363124.1 Em:BX406115.1 Em:BX425742.1" FT CDS join(AL031848.11:59429..59571,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324657..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-006" FT /standard_name="OTTHUMP00000001415" FT /product="acyl-CoA thioesterase 7" FT /note="match: proteins: Tr:Q53Y78" FT /protein_id="CAI19435.1" FT /translation="MARPGLIHSAPGLPDTCALLQPPAASAAAAPSMSGPDVETPSAIQ FT ICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLS FT PMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKV FT LEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH FT LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVIT FT ISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPE FT TEDEKKRFEEGKGRYLQMKAKRQGHAEPQP" FT mRNA join(AL031848.11:59467..59571,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6342784..6342856), FT complement(6341162..6341346),complement(6324333..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-002" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074416.1" FT mRNA join(AL031848.11:59467..59571,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6342784..6342948), FT complement(6341162..6341346),complement(6324333..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-003" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074415.1" FT polyA_signal complement(6307432..6307437) FT polyA_site complement(6307406) FT CDS join(6304426..6304506,6304608..6304689,6305170..>6305547) FT /gene="HES3" FT /locus_tag="RP1-120G22.7-002" FT /standard_name="OTTHUMP00000001390" FT /product="hairy and enhancer of split 3 (Drosophila)" FT /protein_id="CAI19439.1" FT /translation="MEKKRRARINVSLEQLKSLLEKHYSHQIRKRKLEKADILELSVKY FT MRSLQNSLQGLWPVPRGAEQPSGFRSCLPGVSQLLRRGDEVGSGLRCPLVPESAAGSTM FT DSAGLGQEAPALFRPCTPAVWAPAPAAGGPRSPPPLLLLPESLPGSSASVPPPQPASSR FT CAESPGLGLRVWRPWGS" FT mRNA join(6303645..6303911,6304396..6304506,6304608..6304689, FT 6305170..6305667,6305699..6306095) FT /gene="HES3" FT /locus_tag="RP1-120G22.7-001" FT /product="hairy and enhancer of split 3 (Drosophila)" FT /note="match: ESTs: Em:BY733481.1" FT /note="match: cDNAs: Em:AK090218.1" FT mRNA join(6303646..6303893,6304420..6304506,6304608..6304689, FT 6305170..>6305547) FT /gene="HES3" FT /locus_tag="RP1-120G22.7-002" FT /product="hairy and enhancer of split 3 (Drosophila)" FT /note="match: cDNAs: Em:D13418.1" FT mRNA join(AL031848.11:67015..67334,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324333..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-001" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074417.1" FT /note="match: ESTs: Em:AA059373.1 Em:AL521641.2 FT Em:AL702662.1 Em:AW958013.1 Em:BF026988.1 Em:BF978518.1 FT Em:BF982149.1 Em:BG032495.1 Em:BG768180.1 Em:BI822642.1 FT Em:BM807217.1 Em:BQ227185.1 Em:BQ689305.1 Em:BQ689972.1 FT Em:BU168640.1 Em:BU171356.1 Em:BU179742.1 Em:BX396834.1 FT Em:N39397.1" FT CDS join(AL031848.11:67162..67334,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324657..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-001" FT /standard_name="OTTHUMP00000001410" FT /product="acyl-CoA thioesterase 7" FT /note="match: proteins: Sw:O00154 Sw:Q91V12" FT /protein_id="CAI19440.1" FT /translation="MKLLARALRLCEFGRQASSRRLVAGQGCVGPRRGCCAPVQVVGPR FT ADLPPCGACITGRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL FT ARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYV FT PLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNT FT VSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFH FT DKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGR FT SLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQP" FT mRNA join(6297831..6297908,6298281..6299504) FT /gene="C1orf211" FT /locus_tag="RP1-120G22.6-001" FT /product="chromosome 1 open reading frame 211" FT /note="match: ESTs: Em:AI611130.1 Em:BE546866.1 FT Em:BI333919.1 Em:BI335051.1 Em:BU623051.1 Em:BU733886.1" FT /note="match: cDNAs: Em:BC030279.1" FT mRNA join(6296300..6296396,6297026..6297210,6297305..6297405, FT 6297874..6297908,6298281..6299000) FT /gene="C1orf211" FT /locus_tag="RP1-120G22.6-002" FT /product="chromosome 1 open reading frame 211" FT /note="match: ESTs: Em:BE546866.1 Em:BE732470.1" FT mRNA complement(join(6284659..6285322,6291962..6292179, FT 6294946..6295034,6295777..6296032)) FT /gene="ICMT" FT /locus_tag="RP1-120G22.4-006" FT /product="isoprenylcysteine carboxyl methyltransferase" FT /note="match: ESTs: Em:AL532289.2 Em:BI092582.1 FT Em:BM042217.1 Em:BM454345.1 Em:BQ050510.1" FT mRNA complement(join(6283551..6285322,6291962..6292179, FT 6293534..6293703,6294465..6294571,6294946..6295034, FT 6295777..6296032)) FT /gene="ICMT" FT /locus_tag="RP1-120G22.4-002" FT /product="isoprenylcysteine carboxyl methyltransferase" FT /note="match: ESTs: Em:AA143108.1 Em:BE906561.1 FT Em:BG035024.1 Em:BQ437332.1 Em:CA329011.1 Em:CB246902.1 FT Em:CB813749.1" FT /note="match: cDNAs: Em:BC017037.1" FT mRNA complement(join(6281253..6285322,6291962..6292179, FT 6293534..6293703,6294946..6295034,6295777..6296000)) FT /gene="ICMT" FT /locus_tag="RP1-120G22.4-001" FT /product="isoprenylcysteine carboxyl methyltransferase" FT /note="match: ESTs: Em:AL513958.2 Em:AL548361.2 FT Em:AL553748.2 Em:AL556195.2 Em:AU141081.1 Em:AU280094.1 FT Em:AU280344.1 Em:AV700846.1 Em:BE393129.1 Em:BE745625.1 FT Em:BE747040.1 Em:BE891108.1 Em:BE905626.1 Em:BF919873.1 FT Em:BF969731.1 Em:BF982216.1 Em:BG111984.1 Em:BG166399.1 FT Em:BG752291.1 Em:BG831479.1 Em:BI254420.1 Em:BM008105.1 FT Em:BM467041.1 Em:BM552437.1 Em:BM564792.1 Em:BM726894.1 FT Em:BQ016337.1 Em:BQ045104.1 Em:BQ045349.1 Em:BU155343.1 FT Em:BU157494.1 Em:BU173806.1 Em:BU187180.1 Em:BU501528.1 FT Em:BU509543.1 Em:BU616418.1 Em:BU741178.1 Em:BU859131.1 FT Em:BU955941.1 Em:BX110443.1 Em:BX433358.1 Em:CA309880.1 FT Em:CA446640.1 Em:CA446647.1 Em:CA454248.1 Em:CB851969.1 FT Em:CB994396.1" FT /note="match: cDNAs: Em:AF064084.1 Em:AF075595.1 FT Em:AF209926.1 Em:AK092890.1 Em:BC028168.1" FT CDS complement(join(6285140..6285322,6291962..6292179, FT 6293534..6293703,6294946..6295034,6295777..6295971)) FT /gene="ICMT" FT /locus_tag="RP1-120G22.4-001" FT /standard_name="OTTHUMP00000001381" FT /product="isoprenylcysteine carboxyl methyltransferase" FT /note="match: proteins: Sw:O12947 Sw:O60725 Sw:Q9EQK7 FT Sw:Q9WVM4" FT /protein_id="CAI19441.1" FT /translation="MAGCAARAPPGSEARLSLATFLLGASVLALPLLTRAGLQGRTGLA FT LYVAGLNALLLLLYRPPRYQIAIRACFLGFVFGCGTLLSFSQSSWSHFGWYMCSLSLFH FT YSEYLVTAVNNPKSLSLDSFLLNHSLEYTVAALSSWLEFTLENIFWPELKQITWLSVTG FT LLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLVTSGVYAWFRHPSYVGWFYWSIG FT TQVMLCNPICGVSYALTVWRFFRDRTEEEEISLIHFFGEEYLEYKKRVPTGLPFIKGVK FT VDL" FT misc_feature complement(6294012) FT /note="Clone_left_end: RP5-889P23" FT mRNA complement(join(6281252..6282357,6282869..6284114)) FT /gene="ICMT" FT /locus_tag="RP1-120G22.4-004" FT /product="isoprenylcysteine carboxyl methyltransferase" FT /note="match: cDNAs: Em:AF173157.1 Em:AL117548.1" FT mRNA complement(join(6281958..6282220,6283498..6283562)) FT /gene="ICMT" FT /locus_tag="RP1-120G22.4-005" FT /product="isoprenylcysteine carboxyl methyltransferase" FT /note="match: ESTs: Em:AA448574.1" FT polyA_site 6281359 FT polyA_signal 6281337..6281342 FT polyA_signal complement(6281274..6281279) FT polyA_site complement(6281253) FT polyA_site 6280865 FT polyA_signal 6280839..6280844 FT mRNA join(AL031848.11:92121..92258,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324333..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-004" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074418.1" FT /note="match: ESTs: Em:AA305593.1 Em:BU594651.1" FT CDS join(AL031848.11:92176..92258,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324657..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-004" FT /standard_name="OTTHUMP00000001413" FT /product="acyl-CoA thioesterase 7" FT /protein_id="CAI19442.1" FT /translation="MLLLRRSLSLNVLRKEVDRACFGEKAKQIMRPDDANVAGNVHGGT FT ILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKH FT SVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKR FT YEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMK FT LMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVD FT ADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKA FT KRQGHAEPQP" FT mRNA join(AL031848.11:93484..94002,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324333..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-005" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074419.1" FT /note="match: ESTs: Em:AA035123.1 Em:AV748198.1 FT Em:BQ067921.1 Em:BQ683828.1 Em:BQ945532.1 Em:CD105607.1" FT CDS join(AL031848.11:93983..94002,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(6341162..6341346), FT complement(6324657..6324755)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-005" FT /standard_name="OTTHUMP00000001414" FT /product="acyl-CoA thioesterase 7" FT /protein_id="CAI19443.1" FT /translation="MAFQLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQN FT GERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLT FT NKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQP FT VLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTA FT SVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTY FT VSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQP" FT mRNA join(6272798..6272963,6273126..6273243,6278349..6278429, FT 6279296..6279403) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-006" FT /product="chromosome 1 open reading frame 188" FT /note="match: ESTs: Em:BX103942.1" FT mRNA join(6271095..6271178,6271927..6272113,6272291..6272476, FT 6272742..6272896) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-005" FT /product="chromosome 1 open reading frame 188" FT /note="match: ESTs: Em:BQ417069.1 Em:BU786548.1" FT mRNA join(6270998..6271178,6271927..6271976) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-003" FT /product="chromosome 1 open reading frame 188" FT /note="match: ESTs: Em:AI219323.1" FT mRNA join(6270962..6270998,6271081..6271178,6271983..6272113) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-004" FT /product="chromosome 1 open reading frame 188" FT /note="match: ESTs: Em:AA788745.1" FT mRNA complement(join(6252990..6253114,6257712..6257816, FT 6260549..6260810,6268741..6268799,6269195..6269449)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-006" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:BM450322.1 Em:CB268503.1" FT mRNA join(AL031848.11:100579..100603,AL031848.11:102962..103079, FT AL031848.11:113239..113395,AL031848.11:119260..119351, FT AL031848.11:125415..125529,AL031848.11:134250..134336, FT complement(6354924..6355040),complement(<6341190..6341346)) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-008" FT /product="acyl-CoA thioesterase 7" FT /note="match: ESTs: Em:BE736800.1" FT mRNA complement(join(6246752..6246876,6252990..6253114, FT 6257712..6257816,6268741..6268799,6269195..6269304)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-007" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:BU783482.1" FT mRNA join(6268920..6269085,6269474..6269599,6269984..6270030, FT 6270283..6270355,6270430..6270498,6271927..6272113, FT 6272278..6272476,6272742..6273243,6278349..6278429, FT 6279296..6280865) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-002" FT /product="chromosome 1 open reading frame 188" FT /note="match: cDNAs: Em:AK056658.1" FT /note="match: ESTs: Em:AI358038.1 Em:BQ045434.1 FT Em:N95458.1" FT mRNA join(6268678..6269085,6269175..6269256,6269328..6269599, FT 6269984..6270030,6270283..6270355,6270430..6270960) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-009" FT /product="chromosome 1 open reading frame 188" FT /note="match: ESTs: Em:AI313148.1 Em:AI827065.1 FT Em:AW105079.1 Em:BI765593.1" FT /note="match: cDNAs: Em:BC034459.1" FT misc_feature complement(6268301..6268345) FT /note="Single clone region. short insert library only" FT CDS join(6266596..6266786,6267439..6267571,6268941..6269085, FT 6269175..6269256,6269328..6269403,6269474..6269599, FT 6269984..6270030,6270283..6270355,6270430..6270498, FT 6270930..6270998,6271081..6271178,6271927..6272113, FT 6272291..6272476,6272742..6272793,6273126..6273243, FT 6278349..6278429,6279296..6279467) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-001" FT /standard_name="OTTHUMP00000001377" FT /product="chromosome 1 open reading frame 188" FT /note="match: proteins: Sw:Q3V3A7.1" FT /protein_id="CAI19444.2" FT /translation="MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFC FT AGCLRGRATDGRLTCPLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLE FT CSEQDVETTYFCNTCGQPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPY FT LLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAI FT ALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLS FT HLATLLPTLQVHLVICSSFLSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIAS FT DHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQK FT PTLHRSISTKVLLAEGENTPFAEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSL FT IKAEIMGDVLHKSLQLDVQIASEHASLEGMRVVFQEIWEEAYQRVANEQEIYEAQLHDL FT LQLRQENAYLTTITKQITPYVRSIAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAAS FT ARNNPGSVPEKREKTSEPKGNSWAPNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT" FT mRNA join(6266236..6266362,6266596..6266786,6267439..6267571, FT 6268941..6269085,6269175..6269256,6269328..6269403, FT 6269474..6269599,6269984..6270030,6270283..6270355, FT 6270430..6270498,6270930..6270998,6271081..6271178, FT 6271927..6272113,6272291..6272476,6272742..6272793, FT 6273126..6273243,6278349..6278429,6279296..6281359) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-001" FT /product="chromosome 1 open reading frame 188" FT /note="match: cDNAs: Em:AK042379.1 Em:AK127700.1" FT /note="match: ESTs: Em:AA994370.1 Em:AI193900.1 FT Em:AI220246.1 Em:AW294656.1 Em:BQ045220.1 Em:BU175661.1 FT Em:DA719827.1 Em:DB290694.1 Em:DB636433.1" FT mRNA join(6266189..6266362,6266596..6266786,6267439..6267624) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-008" FT /product="chromosome 1 open reading frame 188" FT /note="match: ESTs: Em:BM310807.1 Em:CD673733.1" FT mRNA join(6265535..6266161,6266256..6266362,6266596..6266786, FT 6267439..6268367) FT /gene="C1orf188" FT /locus_tag="RP1-120G22.3-007" FT /product="chromosome 1 open reading frame 188" FT /note="match: ESTs: Em:AA494215.1 Em:AI474487.1 FT Em:BF510516.1 Em:BM310499.1 Em:BM669545.1 Em:BM698769.1" FT /note="match: cDNAs: Em:AK128246.1" FT mRNA complement(join(6264900..6265042,6265266..6265473, FT 6265814..6265840)) FT /locus_tag="RP1-120G22.11-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI473719.1" FT mRNA complement(join(6252987..6253114,6257712..6257816, FT 6260549..6260787,6263427..6263554)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-008" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:AA203261.1" FT mRNA complement(join(6246675..6246876,6252990..6253114, FT 6257712..6257816,6260549..6260902)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-002" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:AV758018.1 Em:BI114052.1 FT Em:BM451228.1" FT mRNA complement(join(6245080..6246876,6252990..6253114, FT 6257712..6257816,6259622..6259672)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-001" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:AL545780.2 Em:AL547798.2 FT Em:AL548103.2 Em:AL548108.2 Em:AL551315.2 Em:AL558923.2 FT Em:AL574090.2 Em:AU118531.1 Em:AU136465.1 Em:AV756844.1 FT Em:BE250686.1 Em:BE270619.1 Em:BE395435.1 Em:BF577321.1 FT Em:BG686877.1 Em:BG775693.1 Em:BI258665.1 Em:BI597377.1 FT Em:BM665682.1 Em:BM678916.1 Em:BQ269584.1 Em:BQ438458.1 FT Em:BQ774119.1 Em:BU155610.1 Em:BU683566.1 Em:BU685733.1 FT Em:BU927988.1 Em:BU942831.1 Em:BX420502.1 Em:BX438159.1 FT Em:CA336134.1 Em:CD047838.1 Em:CD050076.1 Em:CD050658.1 FT Em:CD108909.1 Em:CD691629.1 Em:CF130136.1" FT /note="match: cDNAs: Em:AF113701.1 Em:AF136171.1 FT Em:AK097075.1 Em:BC007139.1 Em:BC011829.1 Em:BC011829.2 FT Em:BC020237.1 Em:BC035566.1 Em:D17652.1 Em:X59357.1" FT CDS complement(join(6246732..6246876,6252990..6253114, FT 6257712..6257816,6259622..6259633)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-001" FT /standard_name="OTTHUMP00000001141" FT /product="ribosomal protein L22" FT /note="match: proteins: Sw:P35268 Sw:P47198 Sw:P67984 FT Sw:Q90YU6 Tr:Q7Z4W8 Tr:Q98TF8" FT /protein_id="CAI19448.1" FT /translation="MAPVKKLVVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQE FT RIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVA FT NSKESYELRYFQINQDEEEEEDED" FT mRNA complement(join(6246635..6246876,6252990..6253114, FT 6257712..6259623)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-003" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:AA252631.1 Em:AA315111.1 FT Em:AL539203.2 Em:BG036686.1 Em:BG771853.1 Em:BI460618.1 FT Em:BI834375.1 Em:BQ358912.1 Em:D58941.1" FT mRNA complement(join(6246783..6246876,6252990..6253114, FT 6257712..6257816,6259430..6259613)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-005" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:BG477658.1" FT mRNA complement(join(6241329..6241546,6252990..6253114, FT 6257712..6257817)) FT /gene="RPL22" FT /locus_tag="RP1-120G22.1-004" FT /product="ribosomal protein L22" FT /note="match: ESTs: Em:BU069971.1 Em:BU070216.1 FT Em:BU071700.1 Em:BU071720.1 Em:BU948212.1 Em:BU948481.1" FT misc_feature complement(6252684..6253038) FT /note="Single clone region. short insert library only" FT polyA_signal complement(6245109..6245114) FT polyA_site complement(6245080) FT mRNA join(complement(6240005..6240183), FT complement(6228210..6228337),complement(6219396..6219575), FT complement(6215659..6215777),complement(6214720..6214958), FT complement(6212472..6212596),complement(6211092..6211215), FT complement(6209306..6209472),complement(6208914..6209135), FT complement(6206725..6206931),complement(6206272..6206483), FT complement(6204084..6204215),complement(6203883..6203991), FT AL035406.25:840..1031,AL035406.25:1117..1317, FT AL035406.25:6580..6717,AL035406.25:6807..6928, FT AL035406.25:8042..8215,AL035406.25:8586..8727, FT AL035406.25:9186..9317,AL035406.25:11697..11814, FT AL035406.25:13117..13241,AL035406.25:14376..14607, FT AL035406.25:14836..14946,AL035406.25:15227..15399, FT AL035406.25:16699..16873,AL035406.25:17587..17679, FT AL035406.25:17833..17921,AL035406.25:18212..18345, FT AL035406.25:18784..18928,AL035406.25:19338..19497, FT AL035406.25:21872..21951,AL035406.25:22208..22340, FT AL035406.25:30447..30536,AL035406.25:31168..31305, FT AL035406.25:31562..31670,AL035406.25:32919..33051, FT AL035406.25:33455..33650,AL035406.25:36666..36829, FT AL035406.25:36936..37050,AL035406.25:37158..37211, FT AL035406.25:38018..41652) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-001" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AB007913.1 Em:AF425231.1 FT Em:AL117491.1" FT /note="match: ESTs: Em:AA394017.1 Em:AA435597.1 FT Em:AI075932.1 Em:AI369154.1 Em:AL044919.1 Em:AL046111.2 FT Em:AL134392.1 Em:AL519188.1 Em:AL519189.2 Em:AW005809.1 FT Em:BE466693.1 Em:BE590137.1 Em:BE621343.1 Em:BF918547.1 FT Em:BF950965.1 Em:BF950966.1 Em:BI603565.1 Em:BI603800.1 FT Em:BI753222.1 Em:BI756485.1 Em:BI916428.1 Em:BI919134.1 FT Em:BM713651.1 Em:BM714801.1 Em:BM930129.1 Em:BQ067813.1 FT Em:BQ365945.1 Em:BU178652.1 Em:BU193325.1 Em:BU738969.1 FT Em:BU740688.1 Em:BX096438.1 Em:BX432977.1 Em:BX432978.1 FT Em:BX451393.1 Em:CB724019.1 Em:F11047.1 Em:R88567.1" FT CDS join(complement(6240005..6240083), FT complement(6228210..6228337),complement(6219396..6219575), FT complement(6215659..6215777),complement(6214720..6214958), FT complement(6212472..6212596),complement(6211092..6211215), FT complement(6209306..6209472),complement(6208914..6209135), FT complement(6206725..6206931),complement(6206272..6206483), FT complement(6204084..6204215),complement(6203883..6203991), FT AL035406.25:840..1031,AL035406.25:1117..1317, FT AL035406.25:6580..6717,AL035406.25:6807..6928, FT AL035406.25:8042..8215,AL035406.25:8586..8727, FT AL035406.25:9186..9317,AL035406.25:11697..11814, FT AL035406.25:13117..13241,AL035406.25:14376..14607, FT AL035406.25:14836..14946,AL035406.25:15227..15399, FT AL035406.25:16699..16873,AL035406.25:17587..17679, FT AL035406.25:17833..17921,AL035406.25:18212..18345, FT AL035406.25:18784..18928,AL035406.25:19338..19497, FT AL035406.25:21872..21951,AL035406.25:22208..22340, FT AL035406.25:30447..30536,AL035406.25:31168..31305, FT AL035406.25:31562..31670,AL035406.25:32919..33051, FT AL035406.25:33455..33650,AL035406.25:36666..36829, FT AL035406.25:36936..37050,AL035406.25:37158..37165) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-001" FT /standard_name="OTTHUMP00000001137" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: proteins: Sw:Q8TDI0" FT /protein_id="CAI19450.1" FT /translation="MRGPVGTEEELPRLFAEEMENEDEMSEEEDGGLEAFDDFFPVEPV FT SLPKKKKPKKLKENKCKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLK FT DKKEKKAKRKKKDEDEDDNDDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKA FT FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTI FT SPPLAVSPPQVPQPVPIRKAKTKEGKGPGVRKKIKGSKDGKKKGKGKKTAGLKFRFGGI FT SNKRKKGSSSEEDEREESDFDSASIHSASVRSECSAALGKKSKRRRKKKRIDDGDGYET FT DHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDD FT DDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCP FT RCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAG FT LSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYA FT KMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYD FT NLKQAYWGHRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYID FT STGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYL FT VSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMK FT KEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYK FT LLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLR FT RLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDL FT KKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQ FT MTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGI FT NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM FT MLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSS FT KGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEY FT LSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGK FT RIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKS FT DRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE FT KEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV FT NGKYSTPDLIPEGPEGKKSGEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEK FT DPGAQKPRQPLEVQALPAALDRVESEDKHESPASKERAREERPEETEKAPPSPEQLPRE FT EVLPEKEKILDKLELSLIHSRGDSSELRPDDTKAEEKEPIETQQNGDKEEDDEGKKEDK FT KGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARW FT QDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMT FT QDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKAD FT VTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYSNNFGPNFRG FT PGPGGIVNYNQMPLGPYVTDI" FT mRNA join(complement(6240005..6240083), FT complement(6228210..6228337),complement(6219396..6219575), FT complement(6215659..6215777),complement(6214720..6214958), FT complement(6212472..6212596),complement(6211092..6211215), FT complement(6209306..6209472),complement(6208914..6209135), FT complement(6206725..6206931),complement(6206272..6206483), FT complement(6204084..6204215),complement(6203883..6203991), FT AL035406.25:840..1031,AL035406.25:1117..1317, FT AL035406.25:6580..6717,AL035406.25:6807..6928, FT AL035406.25:8042..8215,AL035406.25:8586..8727, FT AL035406.25:9186..9317,AL035406.25:11697..11814, FT AL035406.25:13117..13241,AL035406.25:14376..14405, FT AL035406.25:21872..21951,AL035406.25:22208..22340, FT AL035406.25:30447..30536,AL035406.25:31168..31305, FT AL035406.25:31562..31670,AL035406.25:32919..33051, FT AL035406.25:33455..33650,AL035406.25:36666..36829, FT AL035406.25:36936..37050,AL035406.25:37158..37211, FT AL035406.25:38018..38354) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-002" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AK127046.1" FT mRNA join(complement(6206725..6206901), FT complement(6206272..6206483),complement(6204084..6204215), FT complement(6203883..6203991),AL035406.25:840..1031, FT AL035406.25:1117..1317,AL035406.25:6580..6717, FT AL035406.25:6807..6928,AL035406.25:8042..8215, FT AL035406.25:8586..8727,AL035406.25:9186..9317, FT AL035406.25:11697..11814,AL035406.25:13117..13241, FT AL035406.25:14376..14607,AL035406.25:14836..14946, FT AL035406.25:15227..15399,AL035406.25:16699..16873, FT AL035406.25:17587..17679,AL035406.25:17833..17921, FT AL035406.25:18212..18345,AL035406.25:18784..18928, FT AL035406.25:19338..19497,AL035406.25:21872..21951, FT AL035406.25:22208..22294,AL035406.25:41352..41652) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-007" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AK091386.1 Em:AX746951.1" FT CDS join(complement(6206725..6206862), FT complement(6206272..6206483),complement(6204084..6204215), FT complement(6203883..6203991),AL035406.25:840..1031, FT AL035406.25:1117..1317,AL035406.25:6580..6717, FT AL035406.25:6807..6928,AL035406.25:8042..8215, FT AL035406.25:8586..8727,AL035406.25:9186..9317, FT AL035406.25:11697..11814,AL035406.25:13117..13241, FT AL035406.25:14376..14607,AL035406.25:14836..14946, FT AL035406.25:15227..15399,AL035406.25:16699..16873, FT AL035406.25:17587..17679,AL035406.25:17833..17921, FT AL035406.25:18212..18345,AL035406.25:18784..18928, FT AL035406.25:19338..19497,AL035406.25:21872..21951, FT AL035406.25:22208..22294,AL035406.25:41352..41525) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-007" FT /standard_name="OTTHUMP00000001140" FT /product="chromodomain helicase DNA binding protein 5" FT /protein_id="CAI19451.1" FT /translation="MVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAGLSYWHCSWVKEL FT QLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIK FT PEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHREL FT MLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLE FT GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWE FT REFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLT FT SYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNL FT EELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA FT KTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPV FT AAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFL FT EYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYD FT SDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLG FT SKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKK FT HGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVR FT EEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDAS FT QEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLAR FT VGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMR FT HLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPE FT GPEGKKSGEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMDEKDPGAQKPRQPLE FT VQALPAALDRVESEDKHESPASKERAREERPEQTPPAQAQLRGGRPLSPGTAPGWQREG FT PGLGARRARSPSQGGPGGGGSSFGSQAPL" FT mRNA join(complement(6204084..6204164), FT complement(6203883..6203991),AL035406.25:840..1031, FT AL035406.25:1117..1317,AL035406.25:6580..6717, FT AL035406.25:6807..6928,AL035406.25:8042..8215, FT AL035406.25:8586..8727,AL035406.25:9186..9317, FT AL035406.25:11697..11814,AL035406.25:13117..13241, FT AL035406.25:14376..14607,AL035406.25:14836..14946, FT AL035406.25:15227..15399,AL035406.25:16699..16873, FT AL035406.25:17587..17679,AL035406.25:17833..17921, FT AL035406.25:18212..18345,AL035406.25:18784..18928, FT AL035406.25:19338..19497,AL035406.25:21872..21951, FT AL035406.25:22208..22340,AL035406.25:30029..30134, FT AL035406.25:30447..30536,AL035406.25:31168..31305, FT AL035406.25:31562..31670,AL035406.25:32919..33051, FT AL035406.25:33455..33650,AL035406.25:36666..36829, FT AL035406.25:37158..37211,AL035406.25:38018..38364) FT /gene="CHD5" FT /locus_tag="RP1-233K16.2-004" FT /product="chromodomain helicase DNA binding protein 5" FT /note="match: cDNAs: Em:AL110281.1 Em:AL137693.1" FT misc_feature complement(6203604) FT /note="Clone_right_end: RP1-202O8" FT misc_feature complement(6369923..6512887) FT /note="annotated region of clone" FT mRNA join(6511777..6512156,AL158217.25:6357..6436, FT AL158217.25:6534..6545,AL158217.25:9172..9584) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-003" FT /product="espin" FT /note="match: ESTs: Em:BQ644238.1" FT CDS join(<6511718..6511808,6511893..6512156, FT AL158217.25:6357..6436,AL158217.25:6534..6545, FT AL158217.25:9172..9283,AL158217.25:10353..10358) FT /codon_start=2 FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-007" FT /standard_name="OTTHUMP00000000921" FT /product="espin" FT /protein_id="CAI19771.1" FT /translation="EIKAGKSLKPTPQSKGLTTVFSGIGQPAFQPDSPLPSVSPALSPV FT RSPTPPAAGFQPLLNGSLVPVPPTTPAPGVQLDVEALIPTHDEQGRPIPEWKRQVMVRK FT MQLKMQEEEEQRRKEEEEEARLASMPAWRRDLLRKKLEEEREQKRKEEERQKQEELRRE FT KEQSEKLRTLGYDESKLAPWQRQI" FT mRNA join(<6511718..6511808,6511893..6512156, FT AL158217.25:6357..6436,AL158217.25:6534..6545, FT AL158217.25:9172..9283,AL158217.25:10353..10543) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-007" FT /product="espin" FT /note="match: ESTs: Em:BU740944.1" FT mRNA join(6510434..6510530,6511663..6511808,6511893..6512009) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-006" FT /product="espin" FT /note="match: ESTs: Em:H72801.1" FT mRNA join(6508580..6508621,6508701..6508862,6508953..6509018) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-005" FT /product="espin" FT /note="match: ESTs: Em:BQ636531.1" FT mRNA join(6508527..6508621,6508701..6508862,6511663..6511808, FT 6511893..6512156,AL158217.25:6357..6436, FT AL158217.25:6534..6545,AL158217.25:9172..9225) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-004" FT /product="espin" FT /note="match: ESTs: Em:BE791713.1" FT mRNA join(6508103..6508177,6508701..6508862,6508953..6509151, FT 6511663..6511808,6511893..6512156,AL158217.25:6357..6436, FT AL158217.25:6534..6545,AL158217.25:9172..10102) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-009" FT /product="espin" FT /note="match: cDNAs: Em:AY203958.1" FT mRNA complement(join(6503094..6503229,6505622..6505741, FT 6506972..6507066)) FT /locus_tag="RP1-202O8.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI461667.1" FT /note="match: cDNAs: Em:BC038781.1" FT misc_feature complement(6505528) FT /note="Clone_left_end: XX-DJ120G22" FT polyA_site complement(6503094) FT mRNA join(<6500438..6500500,6500719..6500868,6500994..6501125, FT 6504541..6504742,6505724..>6505817) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-002" FT /product="espin" FT /note="match: ESTs: Em:BM713713.1" FT CDS join(<6500438..6500500,6500719..6500868,6500994..6501125, FT 6504541..6504742,6505724..>6505817) FT /codon_start=1 FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-002" FT /standard_name="OTTHUMP00000000843" FT /product="espin" FT /protein_id="CAI19772.1" FT /translation="DGMTPLHAAAQMGHSPVIVWLDKDGATAMHFAASRGHTKVLSWLL FT LHGGEISADLWGGTPLHDAAENGELECCQILVVNGAELDVRDRDGYTAADLSDFNGHSH FT CTRYLRTVENLSVEHRVLSRDPSAELEAKQPDSGMSSPNTTVSVQPLNFDLSSPTSTLS FT NYDSCSSSHSSIKGQHPPCGLSSARAADIQSYMDMLNPELGLPRGTIGKPT" FT CDS join(6485016..6485309,6488286..6488479,6500314..6500500, FT 6500686..6500868,6500994..6501125,6504541..6504742, FT 6505724..6505995,6508701..6509151,6511663..6511808, FT 6511893..6512156,AL158217.25:6357..6436, FT AL158217.25:6534..6545,AL158217.25:9172..9319) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-001" FT /standard_name="OTTHUMP00000000828" FT /product="espin" FT /protein_id="CAI19773.1" FT /translation="MALEQALQAARQGELDVLRSLHAAGLLGPSLRDPLDALPVHHAAR FT AGKLHCLRFLVEEAALPAAARARNGATPAHDASATGHLACLQWLLSQGGCRVQDKDNSG FT ATVLHLAARFGHPEVVNWLLHHGGGDPTAATDMGALPIHYAAAKGDFPSLRLLVEHYPE FT GVNAQTKNGATPLYLACQEGHLEVTQYLVQECGADPHARAHDGMTPLHAAAQMGHSPVI FT VWLVSCTDVSLSEQDKDGATAMHFAASRGHTKVLSWLLLHGGEISADLWGGTPLHDAAE FT NGELECCQILVVNGAELDVRDRDGYTAADLSDFNGHSHCTRYLRTVENLSVEHRVLSRD FT PSAELEAKQPDSGMSSPNTTVSVQPLNFDLSSPTSTLSNYDSCSSSHSSIKGQHPPCGL FT SSARAADIQSYMDMLNPELGLPRGTIGKPTPPPPPPSFPPPPPPPGTQLPPPPPGYPAP FT KPPVGPQAADIYMQTKNKLRHVETEALKKELSSCDGHDGLRRQDSSRKPRAFSKQPSTG FT DYYRQLGRCPGETLAARPGMAHSEEVRARQPARAGCPRLGPAARGSLEGPSAPPQAALL FT PGNHVPNGCAADPKASRELPPPPPPPPPPLPEAASSPPPAPPLPLESAGPGCGQRRSSS FT STGSTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQSKGLTTVFSGIGQPAFQPDSPLPS FT VSPALSPVRSPTPPAAGFQPLLNGSLVPVPPTTPAPGVQLDVEALIPTHDEQGRPIPEW FT KRQVMVRKMQLKMQEEEEQRRKEEEEEARLASMPAWRRDLLRKKLEEEREQKRKEEERQ FT KQEELRREKEQSEKLRTLGYDESKLAPWQRQVILKKGDIAKY" FT mRNA join(6484848..6485309,6488286..6488479,6500314..6500500, FT 6500686..6500868,6500994..6501125,6504541..6504742, FT 6505724..6505995,6508701..6509151,6511663..6511808, FT 6511893..6512156,AL158217.25:6357..6436, FT AL158217.25:6534..6545,AL158217.25:9172..10117) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-001" FT /product="espin" FT /note="match: cDNAs: Em:AL136880.1" FT /note="match: ESTs: Em:AA401906.1 Em:AA424699.1 FT Em:BE645230.1 Em:BF751564.1 Em:BM727104.1 Em:BM789046.1 FT Em:BM824376.1 Em:BM852474.1 Em:BM977335.1 Em:BQ639536.1 FT Em:BQ640595.1 Em:BU609118.1 Em:CB240902.1 Em:CB243805.1" FT mRNA complement(join(6472478..6473342,6479667..6479762, FT 6479836..6479903,6484538..6484730)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-002" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /note="match: ESTs: Em:BG470458.1" FT /note="match: cDNAs: Em:BC012091.1" FT mRNA complement(join(6475292..6479213,6479301..6479400, FT 6479667..6479762,6479836..6479979)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-001" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /note="match: ESTs: Em:AA643522.1 Em:AI910382.1 FT Em:AL602811.1 Em:AU158355.1 Em:AW970193.1 Em:BQ023595.1 FT Em:BU729177.1 Em:BU753631.1 Em:BU753763.1 Em:CB150564.1 FT Em:CD109395.1" FT /note="match: cDNAs: Em:AK023754.1 Em:AK091122.1" FT mRNA complement(join(6478909..6479400,6479667..6479762, FT 6479836..6479977)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-005" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /note="match: ESTs: Em:CB961786.1" FT mRNA complement(join(6478474..6479213,6479667..6479762, FT 6479836..6479967)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-004" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /note="match: ESTs: Em:BX396798.1" FT mRNA complement(join(6473060..6473342,6479667..6479762, FT 6479836..6479963)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-003" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /note="match: ESTs: Em:BX108718.1" FT CDS complement(join(6478933..6479213,6479301..6479400, FT 6479667..6479762,6479836..6479880)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-001" FT /standard_name="OTTHUMP00000000825" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /protein_id="CAB46198.1" FT /translation="MGLPRRAGDAAELRKSLKPLLEKRRRARINQSLSQLKGLILPLLG FT RENSNCSKLEKADVLEMTVRFLQELPASSWPTAAPLPCDSYREGYSACVARLARVLPAC FT RVLEPAVSARLLEHLWRRAASATLDGGRAGDSSGPSAPAPAPASAPEPASAPVPSPPSP FT PCGPGLWRPW" FT CDS complement(join(6473253..6473342,6479667..6479762, FT 6479836..6479880)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-002" FT /standard_name="OTTHUMP00000000826" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /protein_id="CAB46199.1" FT /translation="MGLPRRAGDAAELRKSLKPLLEKRRRARINQSLSQLKGLILPLLG FT REDASGWHTWLPLHAQNCFLLYIQAPEQPPA" FT polyA_site complement(6477969) FT mRNA complement(join(6473110..6473342,6476576..6476691)) FT /gene="HES2" FT /locus_tag="RP1-202O8.1-006" FT /product="hairy and enhancer of split 2 (Drosophila)" FT /note="match: ESTs: Em:AI676132.1" FT polyA_signal complement(6475308..6475313) FT polyA_site complement(6475292) FT mRNA join(complement(6453317..6454451), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45590) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-006" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AK057168.1 Em:BC017365.2" FT /note="match: ESTs: Em:AA448257.1 Em:AA994873.1 FT Em:AI090641.1 Em:AI126491.1 Em:AI203663.1 Em:AI539474.1 FT Em:AI805171.1 Em:AI827504.1 Em:AL535912.2 Em:AW183574.1 FT Em:BE294531.1 Em:BG324607.1 Em:BG332214.1 Em:BG338545.1 FT Em:BM742333.1 Em:BM743044.1 Em:BX102155.1 Em:BX362959.1 FT Em:BX363124.1 Em:BX406115.1 Em:BX425742.1" FT CDS join(complement(6453317..6453459), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45266) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-006" FT /standard_name="OTTHUMP00000001415" FT /product="acyl-CoA thioesterase 7" FT /note="match: proteins: Tr:Q53Y78" FT /protein_id="CAI19774.1" FT /translation="MARPGLIHSAPGLPDTCALLQPPAASAAAAPSMSGPDVETPSAIQ FT ICRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLS FT PMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKV FT LEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIH FT LVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVIT FT ISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPE FT TEDEKKRFEEGKGRYLQMKAKRQGHAEPQP" FT mRNA join(complement(6453317..6453421), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:27067..27139,AL031847.17:28577..28761, FT AL031847.17:45168..45590) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-002" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074416.1" FT mRNA join(complement(6453317..6453421), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:26975..27139,AL031847.17:28577..28761, FT AL031847.17:45168..45590) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-003" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074415.1" FT mRNA join(complement(6445554..6445873), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45590) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-001" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074417.1" FT /note="match: ESTs: Em:AA059373.1 Em:AL521641.2 FT Em:AL702662.1 Em:AW958013.1 Em:BF026988.1 Em:BF978518.1 FT Em:BF982149.1 Em:BG032495.1 Em:BG768180.1 Em:BI822642.1 FT Em:BM807217.1 Em:BQ227185.1 Em:BQ689305.1 Em:BQ689972.1 FT Em:BU168640.1 Em:BU171356.1 Em:BU179742.1 Em:BX396834.1 FT Em:N39397.1" FT CDS join(complement(6445554..6445726), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45266) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-001" FT /standard_name="OTTHUMP00000001410" FT /product="acyl-CoA thioesterase 7" FT /note="match: proteins: Sw:O00154 Sw:Q91V12" FT /protein_id="CAI19777.1" FT /translation="MKLLARALRLCEFGRQASSRRLVAGQGCVGPRRGCCAPVQVVGPR FT ADLPPCGACITGRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAAL FT ARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLTNKATLWYV FT PLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQPVLNPEPNT FT VSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFH FT DKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTYVSLSQEGR FT SLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQP" FT mRNA join(complement(6420630..6420767), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45590) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-004" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074418.1" FT /note="match: ESTs: Em:AA305593.1 Em:BU594651.1" FT CDS join(complement(6420630..6420712), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45266) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-004" FT /standard_name="OTTHUMP00000001413" FT /product="acyl-CoA thioesterase 7" FT /protein_id="CAI19778.1" FT /translation="MLLLRRSLSLNVLRKEVDRACFGEKAKQIMRPDDANVAGNVHGGT FT ILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKH FT SVEVQVNVMSENILTGAKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKR FT YEAQKLERMETKWRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMK FT LMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVD FT ADPVVDSSQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKA FT KRQGHAEPQP" FT mRNA join(complement(6418886..6419404), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45590) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-005" FT /product="acyl-CoA thioesterase 7" FT /note="match: cDNAs: Em:AB074419.1" FT /note="match: ESTs: Em:AA035123.1 Em:AV748198.1 FT Em:BQ067921.1 Em:BQ683828.1 Em:BQ945532.1 Em:CD105607.1" FT CDS join(complement(6418886..6418905), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..28761,AL031847.17:45168..45266) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-005" FT /standard_name="OTTHUMP00000001414" FT /product="acyl-CoA thioesterase 7" FT /protein_id="CAI19779.1" FT /translation="MAFQLSRIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQN FT GERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVNVMSENILTGAKKLT FT NKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKWRNGDIVQP FT VLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTA FT SVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQKRYRAASAFFTY FT VSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKRQGHAEPQP" FT mRNA join(complement(6412285..6412309), FT complement(6409809..6409926),complement(6399493..6399649), FT complement(6393537..6393628),complement(6387359..6387473), FT complement(6378552..6378638),AL031847.17:14883..14999, FT AL031847.17:28577..>28733) FT /gene="ACOT7" FT /locus_tag="RP1-120G22.10-008" FT /product="acyl-CoA thioesterase 7" FT /note="match: ESTs: Em:BE736800.1" FT misc_feature complement(6369923) FT /note="Clone_left_end: RP1-202O8" FT misc_feature 6512888..6564870 FT /note="annotated region of clone" FT mRNA join(complement(AL031848.11:732..1111),6517244..6517323, FT 6517421..6517432,6520059..6520471) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-003" FT /product="espin" FT /note="match: ESTs: Em:BQ644238.1" FT CDS join(complement(AL031848.11:1080..>1170), FT complement(AL031848.11:732..995),6517244..6517323, FT 6517421..6517432,6520059..6520170,6521240..6521245) FT /codon_start=2 FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-007" FT /standard_name="OTTHUMP00000000921" FT /product="espin" FT /protein_id="CAI22151.1" FT /translation="EIKAGKSLKPTPQSKGLTTVFSGIGQPAFQPDSPLPSVSPALSPV FT RSPTPPAAGFQPLLNGSLVPVPPTTPAPGVQLDVEALIPTHDEQGRPIPEWKRQVMVRK FT MQLKMQEEEEQRRKEEEEEARLASMPAWRRDLLRKKLEEEREQKRKEEERQKQEELRRE FT KEQSEKLRTLGYDESKLAPWQRQI" FT mRNA join(complement(AL031848.11:1080..>1170), FT complement(AL031848.11:732..995),6517244..6517323, FT 6517421..6517432,6520059..6520170,6521240..6521430) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-007" FT /product="espin" FT /note="match: ESTs: Em:BU740944.1" FT mRNA join(complement(AL031848.11:4267..4361), FT complement(AL031848.11:4026..4187), FT complement(AL031848.11:1080..1225), FT complement(AL031848.11:732..995),6517244..6517323, FT 6517421..6517432,6520059..6520112) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-004" FT /product="espin" FT /note="match: ESTs: Em:BE791713.1" FT mRNA join(complement(AL031848.11:4711..4785), FT complement(AL031848.11:4026..4187), FT complement(AL031848.11:3737..3935), FT complement(AL031848.11:1080..1225), FT complement(AL031848.11:732..995),6517244..6517323, FT 6517421..6517432,6520059..6520989) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-009" FT /product="espin" FT /note="match: cDNAs: Em:AY203958.1" FT polyA_site 6520471 FT mRNA join(6520568..6521040,6521240..6521430) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-008" FT /product="espin" FT /note="match: ESTs: Em:AI125636.1 Em:AI870153.1 FT Em:BQ184167.1 Em:N63660.1" FT polyA_signal 6520970..6520975 FT polyA_site 6521004 FT polyA_site complement(6521211) FT polyA_signal complement(6521241..6521246) FT polyA_signal 6521409..6521414 FT polyA_site 6521430 FT mRNA complement(join(6521816..6521822,6522054..6522234, FT 6522379..6522667)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-011" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: ESTs: Em:CB052963.1" FT mRNA complement(join(6521211..6521822,6522054..6522234, FT 6522689..6522726,6522923..6523682)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-007" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: cDNAs: Em:AK094463.1" FT mRNA complement(join(<6521540..6521822,6522054..6522234, FT 6522689..6522723,6522923..>6523070)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-010" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: ESTs: Em:BE220347.1 Em:BM794760.1 FT Em:BM853061.1" FT CDS complement(join(<6521540..6521822,6522054..6522234, FT 6522689..6522723,6522923..>6523070)) FT /codon_start=1 FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-010" FT /standard_name="OTTHUMP00000000928" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /protein_id="CAI22152.1" FT /translation="GGGQPPNTHQLLSVFWVQVLLAGLVVPLLLGATLTYTYRHCWPHK FT PLVTDEAGMEALTPPPATHLSPLDSAHTLLAPPDSSEKICTVQLVGNSWTPGYPETQEA FT LCPQVTWSWDQLPSRALGPAAAPTLSPESPAGSPAMMLQPGPQLYDVMDAVPARRWKEF FT VRTLGLREAEIEAVEVEIGRFRDQQYEMLKRWRQQQPAGLGAVYAALERMGL" FT mRNA complement(join(6522054..6522234,6522689..6522726, FT 6522923..6523016,6523132..6523187,6524435..6524513, FT 6524612..6524779,6525148..6525332)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-008" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: ESTs: Em:BQ068309.1" FT mRNA complement(join(6522695..6522726,6522923..6523030, FT 6524435..6524513,6524612..6524779,6525148..6525193)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-009" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: ESTs: Em:BM826048.1" FT mRNA complement(join(6522697..6522723,6522923..6523030, FT 6523132..6523187,6524435..6524513,6524612..6524779, FT 6525148..6525282,6525500..6525690)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-012" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: ESTs: Em:BI909448.1" FT mRNA complement(join(6521211..6521822,6522054..6522234, FT 6522689..6522726,6522923..6523030,6523132..6523187, FT 6524435..6524513,6524612..6524779,6525148..6525282, FT 6525500..6525620,6526129..6526255)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-001" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: cDNAs: Em:U72763.1 Em:U74611.1 Em:U75380.1 FT Em:U78029.1 Em:U83597.1 Em:U94501.1" FT /note="match: ESTs: Em:AI140043.1 Em:AI203624.1 FT Em:AI300222.1 Em:AI700459.1 Em:AW002222.1 Em:AW964958.1 FT Em:BE563566.1 Em:BF002663.1 Em:BF726557.1 Em:BM009354.1 FT Em:BM666370.1 Em:BM990071.1" FT CDS complement(join(6521494..6521822,6522054..6522234, FT 6522689..6522726,6522923..6523030,6523132..6523187, FT 6524435..6524513,6524612..6524779,6525148..6525282, FT 6525500..6525620,6526129..6526167)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-001" FT /standard_name="OTTHUMP00000000922" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: proteins: Sw:Q93038 Tr:Q99MM1" FT /protein_id="CAI22154.1" FT /translation="MEQRPRGCAAVAAALLLVLLGARAQGGTRSPRCDCAGDFHKKIGL FT FCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVAL FT ENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCG FT TCLPGFYEHGDGCVSCPTSTLGSCPERCAAVCGWRQMFWVQVLLAGLVVPLLLGATLTY FT TYRHCWPHKPLVTADEAGMEALTPPPATHLSPLDSAHTLLAPPDSSEKICTVQLVGNSW FT TPGYPETQEALCPQVTWSWDQLPSRALGPAAAPTLSPESPAGSPAMMLQPGPQLYDVMD FT AVPARRWKEFVRTLGLREAEIEAVEVEIGRFRDQQYEMLKRWRQQQPAGLGAVYAALER FT MGLDGCVEDLRSRLQRGP" FT mRNA complement(join(6521211..6521822,6522054..6522234, FT 6522689..6522726,6522923..6523207,6524435..6524513, FT 6524612..6524779,6525148..6525282,6525500..6525620, FT 6526129..6526235)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-002" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: cDNAs: Em:AF026071.1" FT mRNA complement(join(6521211..6521822,6522054..6522234, FT 6522689..6522726,6522923..6523187,6524435..6524513, FT 6524612..6524779,6525148..6525282,6525500..6525620, FT 6526129..6526235)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-003" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: cDNAs: Em:U94503.1 Em:Y09392.1" FT /note="match: ESTs: Em:AI424936.1" FT mRNA complement(join(6521211..6521822,6522054..6522234, FT 6522689..6522726,6522923..6523030,6523125..6523207, FT 6524435..6524513,6524612..6524779,6525148..6525282, FT 6525500..6525620,6526129..6526235)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-004" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: cDNAs: Em:AF026070.1" FT CDS complement(join(6521494..6521822,6522054..6522234, FT 6522689..6522726,6522923..6523030,6523125..6523207, FT 6524435..6524513,6524612..6524779,6525148..6525282, FT 6525500..6525620,6526129..6526167)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-004" FT /standard_name="OTTHUMP00000000925" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /protein_id="CAI22155.1" FT /translation="MEQRPRGCAAVAAALLLVLLGARAQGGTRSPRCDCAGDFHKKIGL FT FCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVAL FT ENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCG FT TCLPGFYEHGDGCVSCPTPPPSLAGAPWGAVQSAVPLSVAGGRVGVFWVQVLLAGLVVP FT LLLGATLTYTYRHCWPHKPLVTADEAGMEALTPPPATHLSPLDSAHTLLAPPDSSEKIC FT TVQLVGNSWTPGYPETQEALCPQVTWSWDQLPSRALGPAAAPTLSPESPAGSPAMMLQP FT GPQLYDVMDAVPARRWKEFVRTLGLREAEIEAVEVEIGRFRDQQYEMLKRWRQQQPAGL FT GAVYAALERMGLDGCVEDLRSRLQRGP" FT mRNA complement(join(6521211..6521822,6522054..6522234, FT 6522689..6522729,6522923..6523030,6523132..6523187, FT 6524435..6524513,6524612..6524779,6525148..6525282, FT 6525500..6525620,6526129..>6526167)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-005" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: cDNAs: Em:U94502.1" FT CDS complement(join(6521494..6521822,6522054..6522234, FT 6522689..6522729,6522923..6523030,6523132..6523187, FT 6524435..6524513,6524612..6524779,6525148..6525282, FT 6525500..6525620,6526129..>6526167)) FT /codon_start=1 FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-005" FT /standard_name="OTTHUMP00000000926" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /protein_id="CAI22153.1" FT /translation="MEQRPRGCAAVAAALLLVLLGARAQGGTRSPRCDCAGDFHKKIGL FT FCCRGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVAL FT ENCSAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCG FT TCLPGFYEHGDGCVSCPTSTLGSCPERCAAVCGWRQMFWVQVLLAGLVVPLLLGATLTY FT TYRHCWPHKPLVTAADEAGMEALTPPPATHLSPLDSAHTLLAPPDSSEKICTVQLVGNS FT WTPGYPETQEALCPQVTWSWDQLPSRALGPAAAPTLSPESPAGSPAMMLQPGPQLYDVM FT DAVPARRWKEFVRTLGLREAEIEAVEVEIGRFRDQQYEMLKRWRQQQPAGLGAVYAALE FT RMGLDGCVEDLRSRLQRGP" FT mRNA complement(join(6524171..6524513,6524612..6524779, FT 6525148..6525282,6525500..6525620,6526129..>6526159)) FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-006" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /note="match: cDNAs: Em:U75381.1 Em:U83598.1 Em:U94512.1" FT /note="match: ESTs: Em:AW517358.1" FT CDS complement(join(6524431..6524513,6524612..6524779, FT 6525148..6525282,6525500..6525620,6526129..>6526159)) FT /codon_start=2 FT /gene="TNFRSF25" FT /locus_tag="RP4-650H14.2-006" FT /standard_name="OTTHUMP00000000927" FT /product="tumor necrosis factor receptor superfamily, FT member 25" FT /protein_id="CAI22158.1" FT /translation="RPRGCAAVAAALLLVLLGARAQGGTRSPRCDCAGDFHKKIGLFCC FT RGCPAGHYLKAPCTEPCGNSTCLVCPQDTFLAWENHHNSECARCQACDEQASQVALENC FT SAVADTRCGCKPGWFVECQVSQCVSSSPFYCQPCLDCGALHRHTRLLCSRRDTDCGTCL FT PGFYEHGDGCVSCPT" FT polyA_site complement(6527182) FT polyA_signal complement(6527199..6527204) FT mRNA complement(join(6526152..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556629,AL591866.13:16635..17199)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-001" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:AB018263.1 Em:AK096347.1" FT /note="match: ESTs: Em:AI687040.1 Em:AL701195.1 FT Em:BG716015.1 Em:BM723634.1 Em:BM792178.1 Em:BQ019124.1 FT Em:BQ448115.1 Em:BU500889.1 Em:BU687545.1 Em:BU734891.1 FT Em:CB147078.1 Em:CB150376.1 Em:CD674411.1" FT CDS complement(join(6527623..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556629,AL591866.13:16635..16701)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-001" FT /standard_name="OTTHUMP00000001050" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /protein_id="CAI22159.1" FT /translation="MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGR FT AAKVCHHADCQQLHRRGPLNLCEACDSKFHSTMHYDGHVRFDLPPQGSVLARNVSTRSC FT PPRTSPAVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVD FT IETEIVPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRV FT KAPAKPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRK FT NMSEFLGEASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAF FT GREVDKMEQLEGKLHTYSLFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRE FT LIDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAE FT RLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYCM FT EEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKSVL FT RKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEV FT DKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKA FT VKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWV FT DTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP FT TIMRKSSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTAS FT SATPTSELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVPSPP FT PSPRLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLSELCLAVPAP FT GIRTQGSPQEAGPSWDCRGAPSPGSGPGLVGCLAGEPAGSHRKRCGDLPSGASPRVQPE FT PPPGVSAQHRKLTLAQLYRIRTTLLLNSTLTASEV" FT mRNA complement(join(6527182..6527632,6527885..6527953, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556629,AL591866.13:16635..17251)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-003" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:BC036671.1" FT /note="match: ESTs: Em:BF952008.1" FT CDS complement(join(6527623..6527632,6527885..6527953, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556629,AL591866.13:16635..16701)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-003" FT /standard_name="OTTHUMP00000001052" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /protein_id="CAI22160.1" FT /translation="MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGR FT AAKVCHHADCQQLHRRGPLNLCEACDSKFHSTMHYDGHVRFDLPPQGSVLARNVSTRSC FT PPRTSPAVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVD FT IETEIVPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRV FT KAPAKPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRK FT NMSEFLGEASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAF FT GREVDKMEQLEGKLHTYSLFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRE FT LIDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAE FT RLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYCM FT EEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKSVL FT RKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEV FT DKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKA FT VKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWV FT DTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP FT TIMRKSSGSPDSQHWKLTLAQLYRIRTTLLLNSTLTASEV" FT mRNA complement(join(6527182..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531643)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-009" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:AK091201.1" FT CDS complement(join(6527623..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537631)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-005" FT /standard_name="OTTHUMP00000001054" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /protein_id="CAI22161.1" FT /translation="MHYDGHVRFDLPPQGSVLARNVSTRSCPPRTSPAVDLEEEEEESS FT VDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVDIETEIVPAMKKKSLGEVL FT LPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRVKAPAKPGDEGKVEQGMKD FT SKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRKNMSEFLGEASIPGQEPPT FT PSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAFGREVDKMEQLEGKLHTYS FT LFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRELIDGHEKLTRRQCHQQEA FT VWELLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAERLFSNIPEIAQLHRRLWA FT SVMAPVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYCMEEEGCMEYMRGLLRDNDL FT FRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGS FT VERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEVDKLLKEFLHLDLTAPIPG FT ASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKAVKKAERTRVIRPPLLVDK FT IVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWVDTIYNAQNQLQQLRAQEP FT PGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASD FT GSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVDGRS FT CSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLSCPP FT HLLKSKSEASLLQLLAGAGTHGTPSAPSRSLSELCLAVPAPGIRTQGSPQEAGPSWDCR FT GAPSPGSGPGLVGCLAGEPAGSHRKRCGDLPSGASPRVQPEPPPGVSAQHRKLTLAQLY FT RIRTTLLLNSTLTASEV" FT mRNA complement(join(6526152..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6535198,6535522..6535582, FT 6535991..6536096,6537589..6537648)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-008" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:AK131074.1" FT CDS complement(join(6527903..6527958,6528159..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537631)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-006" FT /standard_name="OTTHUMP00000001055" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: proteins: Tr:Q96BS1" FT /protein_id="CAI22162.1" FT /translation="MHYDGHVRFDLPPQGSVLARNVSTRSCPPRTSPAVDLEEEEEESS FT VDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVDIETEIVPAMKKKSLGEVL FT LPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRVKAPAKPGDEGKVEQGMKD FT SKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRKNMSEFLGEASIPGQEPPT FT PSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAFGREVDKMEQLEGKLHTYS FT LFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRELIDGHEKLTRRQCHQQEA FT VWELLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAERLFSNIPEIAQLHRRLWA FT SVMAPVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYCMEEEGCMEYMRGLLRDNDL FT FRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGS FT VERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEVDKLLKEFLHLDLTAPIPG FT ASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKAVKKAERTRVIRPPLLVDK FT IVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWVDTIYNAQNQLQQLRAQEP FT PGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASD FT GSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVDGRS FT CSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLSCPP FT HLLKSKSEASLLQLLAGAGTHGTPSAPSRSLSELCLAVPAPAQEADPGPALPNQDHPAA FT " FT CDS join(complement(AL031848.11:27579..27872), FT complement(AL031848.11:24409..24602), FT complement(AL031848.11:12388..12574), FT complement(AL031848.11:12020..12202), FT complement(AL031848.11:11763..11894), FT complement(AL031848.11:8146..8347), FT complement(AL031848.11:6893..7164), FT complement(AL031848.11:3737..4187), FT complement(AL031848.11:1080..1225), FT complement(AL031848.11:732..995),6517244..6517323, FT 6517421..6517432,6520059..6520206) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-001" FT /standard_name="OTTHUMP00000000828" FT /product="espin" FT /protein_id="CAI22163.1" FT /translation="MALEQALQAARQGELDVLRSLHAAGLLGPSLRDPLDALPVHHAAR FT AGKLHCLRFLVEEAALPAAARARNGATPAHDASATGHLACLQWLLSQGGCRVQDKDNSG FT ATVLHLAARFGHPEVVNWLLHHGGGDPTAATDMGALPIHYAAAKGDFPSLRLLVEHYPE FT GVNAQTKNGATPLYLACQEGHLEVTQYLVQECGADPHARAHDGMTPLHAAAQMGHSPVI FT VWLVSCTDVSLSEQDKDGATAMHFAASRGHTKVLSWLLLHGGEISADLWGGTPLHDAAE FT NGELECCQILVVNGAELDVRDRDGYTAADLSDFNGHSHCTRYLRTVENLSVEHRVLSRD FT PSAELEAKQPDSGMSSPNTTVSVQPLNFDLSSPTSTLSNYDSCSSSHSSIKGQHPPCGL FT SSARAADIQSYMDMLNPELGLPRGTIGKPTPPPPPPSFPPPPPPPGTQLPPPPPGYPAP FT KPPVGPQAADIYMQTKNKLRHVETEALKKELSSCDGHDGLRRQDSSRKPRAFSKQPSTG FT DYYRQLGRCPGETLAARPGMAHSEEVRARQPARAGCPRLGPAARGSLEGPSAPPQAALL FT PGNHVPNGCAADPKASRELPPPPPPPPPPLPEAASSPPPAPPLPLESAGPGCGQRRSSS FT STGSTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQSKGLTTVFSGIGQPAFQPDSPLPS FT VSPALSPVRSPTPPAAGFQPLLNGSLVPVPPTTPAPGVQLDVEALIPTHDEQGRPIPEW FT KRQVMVRKMQLKMQEEEEQRRKEEEEEARLASMPAWRRDLLRKKLEEEREQKRKEEERQ FT KQEELRREKEQSEKLRTLGYDESKLAPWQRQVILKKGDIAKY" FT mRNA join(complement(AL031848.11:27579..28040), FT complement(AL031848.11:24409..24602), FT complement(AL031848.11:12388..12574), FT complement(AL031848.11:12020..12202), FT complement(AL031848.11:11763..11894), FT complement(AL031848.11:8146..8347), FT complement(AL031848.11:6893..7164), FT complement(AL031848.11:3737..4187), FT complement(AL031848.11:1080..1225), FT complement(AL031848.11:732..995),6517244..6517323, FT 6517421..6517432,6520059..6521004) FT /gene="ESPN" FT /locus_tag="RP4-650H14.1-001" FT /product="espin" FT /note="match: cDNAs: Em:AL136880.1" FT /note="match: ESTs: Em:AA401906.1 Em:AA424699.1 FT Em:BE645230.1 Em:BF751564.1 Em:BM727104.1 Em:BM789046.1 FT Em:BM824376.1 Em:BM852474.1 Em:BM977335.1 Em:BQ639536.1 FT Em:BQ640595.1 Em:BU609118.1 Em:CB240902.1 Em:CB243805.1" FT misc_feature 6543641..6543692 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(6527182..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536079,6545958..6546014)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-007" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:AB097001.1" FT mRNA complement(join(6527182..6527632,6527885..6527958, FT 6528159..6528646,6529102..6529301,6529395..6529510, FT 6529604..6529736,6530296..6530415,6530566..6530703, FT 6530795..6530944,6531050..6531160,6531548..6531697, FT 6531818..6531868,6532587..6532682,6533046..6533234, FT 6533311..6533514,6534073..6534224,6534511..6534647, FT 6535107..6535198,6535522..6535582,6535991..6536096, FT 6537589..6537718,6550505..6550630)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-006" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:BC015231.1" FT mRNA complement(join(6527182..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6551697..6551760)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-005" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:AK024676.1" FT /note="match: ESTs: Em:BG772816.1" FT misc_feature 6555492..6555533 FT /note="Sequence from clone PCR only" FT mRNA complement(join(6527182..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556756)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-004" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:BC042606.1" FT /note="match: ESTs: Em:BG677865.1" FT CDS complement(join(6527623..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556576)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-004" FT /standard_name="OTTHUMP00000001053" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: proteins: Tr:Q86YD8" FT /protein_id="CAI22164.1" FT /translation="MDKGRAAKVCHHADCQQLHRRGPLNLCEACDSKFHSTMHYDGHVR FT FDLPPQGSVLARNVSTRSCPPRTSPAVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRR FT HTDDPSKECFTLKFDLNVDIETEIVPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSN FT TPLSLTFEAYRFGGHYLRVKAPAKPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERV FT DAQSRRESLDILAPGRRRKNMSEFLGEASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKN FT RAASRFSGFFSSGPSTSAFGREVDKMEQLEGKLHTYSLFGLPRLPRGLRFDHDSWEEEY FT DEDEDEDNACLRLEDSWRELIDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLF FT LCCLLNLQESGLLCEVEAERLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDF FT LKGFKMFGSLFKPYIRYCMEEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDM FT LAKPHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLA FT AVVSRIDAYEVVESSSDEVDKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKD FT SKMDVYCFLFTDLLLVTKAVKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHS FT AVGAYTFQASGQALCRGWVDTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEE FT EEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEF FT DSGPFSSQSDETSLSTTASSATPTSELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPG FT PMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHG FT TPSAPSRSLSELCLAVPAPGIRTQGSPQEAGPSWDCRGAPSPGSGPGLVGCLAGEPAGS FT HRKRCGDLPSGASPRVQPEPPPGVSAQHRKLTLAQLYRIRTTLLLNSTLTASEV" FT mRNA complement(join(6527182..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556629,6557380..6557450)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-002" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: cDNAs: Em:AK125550.1" FT CDS complement(join(6527623..6527632,6527885..6528646, FT 6529102..6529301,6529395..6529510,6529604..6529736, FT 6530296..6530415,6530566..6530703,6530795..6530944, FT 6531050..6531160,6531548..6531697,6531818..6531868, FT 6532587..6532682,6533046..6533234,6533311..6533514, FT 6534073..6534224,6534511..6534647,6535107..6535198, FT 6535522..6535582,6535991..6536096,6537589..6537718, FT 6556553..6556629,6557380..6557383)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-002" FT /standard_name="OTTHUMP00000001051" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /protein_id="CAI22165.1" FT /translation="MDDQSPAEKKGLRCQNPACMDKGRAAKVCHHADCQQLHRRGPLNL FT CEACDSKFHSTMHYDGHVRFDLPPQGSVLARNVSTRSCPPRTSPAVDLEEEEEESSVDG FT KGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVDIETEIVPAMKKKSLGEVLLPV FT FERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRVKAPAKPGDEGKVEQGMKDSKS FT LSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRKNMSEFLGEASIPGQEPPTPSS FT CSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAFGREVDKMEQLEGKLHTYSLFG FT LPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRELIDGHEKLTRRQCHQQEAVWE FT LLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAERLFSNIPEIAQLHRRLWASVM FT APVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYCMEEEGCMEYMRGLLRDNDLFRA FT YITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKSVLRKTEEPRAKEAVVAMIGSVER FT FIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEVDKLLKEFLHLDLTAPIPGASP FT EETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKAVKKAERTRVIRPPLLVDKIVC FT RELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWVDTIYNAQNQLQQLRAQEPPGS FT QQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSPTIMRKSSGSPDSQHCASDGST FT ETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTASSATPTSELLPLGPVDGRSCSM FT DSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVPSPPPSPRLRRRTPVQLLSCPPHLL FT KSKSEASLLQLLAGAGTHGTPSAPSRSLSELCLAVPAPGIRTQGSPQEAGPSWDCRGAP FT SPGSGPGLVGCLAGEPAGSHRKRCGDLPSGASPRVQPEPPPGVSAQHRKLTLAQLYRIR FT TTLLLNSTLTASEV" FT misc_feature 6562870 FT /note="Clone_right_end: RP4-650H14" FT misc_feature 6564871..6665409 FT /note="annotated region of clone" FT misc_feature 6574117 FT /note="Clone_left_end: RP11-239P22" FT mRNA complement(join(AL158217.25:15265..16745, FT AL158217.25:16998..17759,AL158217.25:18215..18414, FT AL158217.25:18508..18623,AL158217.25:18717..18849, FT AL158217.25:19409..19528,AL158217.25:19679..19816, FT AL158217.25:19908..20057,AL158217.25:20163..20273, FT AL158217.25:20661..20810,AL158217.25:20931..20981, FT AL158217.25:21700..21795,AL158217.25:22159..22347, FT AL158217.25:22424..22627,AL158217.25:23186..23337, FT AL158217.25:23624..23760,AL158217.25:24220..24311, FT AL158217.25:24635..24695,AL158217.25:25104..25209, FT AL158217.25:26702..26831,AL158217.25:45666..45742, FT 6579505..6580069)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-001" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: ESTs: Em:AI687040.1 Em:AL701195.1 FT Em:BG716015.1 Em:BM723634.1 Em:BM792178.1 Em:BQ019124.1 FT Em:BQ448115.1 Em:BU500889.1 Em:BU687545.1 Em:BU734891.1 FT Em:CB147078.1 Em:CB150376.1 Em:CD674411.1" FT /note="match: cDNAs: Em:AB018263.1 Em:AK096347.1" FT CDS complement(join(AL158217.25:16736..16745, FT AL158217.25:16998..17759,AL158217.25:18215..18414, FT AL158217.25:18508..18623,AL158217.25:18717..18849, FT AL158217.25:19409..19528,AL158217.25:19679..19816, FT AL158217.25:19908..20057,AL158217.25:20163..20273, FT AL158217.25:20661..20810,AL158217.25:20931..20981, FT AL158217.25:21700..21795,AL158217.25:22159..22347, FT AL158217.25:22424..22627,AL158217.25:23186..23337, FT AL158217.25:23624..23760,AL158217.25:24220..24311, FT AL158217.25:24635..24695,AL158217.25:25104..25209, FT AL158217.25:26702..26831,AL158217.25:45666..45742, FT 6579505..6579571)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-001" FT /standard_name="OTTHUMP00000001050" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /protein_id="CAI16069.1" FT /translation="MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGR FT AAKVCHHADCQQLHRRGPLNLCEACDSKFHSTMHYDGHVRFDLPPQGSVLARNVSTRSC FT PPRTSPAVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVD FT IETEIVPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRV FT KAPAKPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRK FT NMSEFLGEASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAF FT GREVDKMEQLEGKLHTYSLFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRE FT LIDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAE FT RLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYCM FT EEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKSVL FT RKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEV FT DKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKA FT VKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWV FT DTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP FT TIMRKSSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDETSLSTTAS FT SATPTSELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPESPRVPSPP FT PSPRLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLSELCLAVPAP FT GIRTQGSPQEAGPSWDCRGAPSPGSGPGLVGCLAGEPAGSHRKRCGDLPSGASPRVQPE FT PPPGVSAQHRKLTLAQLYRIRTTLLLNSTLTASEV" FT mRNA complement(join(AL158217.25:16295..16745, FT AL158217.25:16998..17066,AL158217.25:18215..18414, FT AL158217.25:18508..18623,AL158217.25:18717..18849, FT AL158217.25:19409..19528,AL158217.25:19679..19816, FT AL158217.25:19908..20057,AL158217.25:20163..20273, FT AL158217.25:20661..20810,AL158217.25:20931..20981, FT AL158217.25:21700..21795,AL158217.25:22159..22347, FT AL158217.25:22424..22627,AL158217.25:23186..23337, FT AL158217.25:23624..23760,AL158217.25:24220..24311, FT AL158217.25:24635..24695,AL158217.25:25104..25209, FT AL158217.25:26702..26831,AL158217.25:45666..45742, FT 6579505..6580121)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-003" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /note="match: ESTs: Em:BF952008.1" FT /note="match: cDNAs: Em:BC036671.1" FT CDS complement(join(AL158217.25:16736..16745, FT AL158217.25:16998..17066,AL158217.25:18215..18414, FT AL158217.25:18508..18623,AL158217.25:18717..18849, FT AL158217.25:19409..19528,AL158217.25:19679..19816, FT AL158217.25:19908..20057,AL158217.25:20163..20273, FT AL158217.25:20661..20810,AL158217.25:20931..20981, FT AL158217.25:21700..21795,AL158217.25:22159..22347, FT AL158217.25:22424..22627,AL158217.25:23186..23337, FT AL158217.25:23624..23760,AL158217.25:24220..24311, FT AL158217.25:24635..24695,AL158217.25:25104..25209, FT AL158217.25:26702..26831,AL158217.25:45666..45742, FT 6579505..6579571)) FT /gene="PLEKHG5" FT /locus_tag="RP4-650H14.3-003" FT /standard_name="OTTHUMP00000001052" FT /product="pleckstrin homology domain containing, family G FT (with RhoGef domain) member 5" FT /protein_id="CAI16068.1" FT /translation="MNSVLTKHGSPPRSWLSLCSGTDDQSPAEKKGLRCQNPACMDKGR FT AAKVCHHADCQQLHRRGPLNLCEACDSKFHSTMHYDGHVRFDLPPQGSVLARNVSTRSC FT PPRTSPAVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVD FT IETEIVPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRV FT KAPAKPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRK FT NMSEFLGEASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAF FT GREVDKMEQLEGKLHTYSLFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWRE FT LIDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAE FT RLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYCM FT EEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKSVL FT RKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSSDEV FT DKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLLVTKA FT VKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQALCRGWV FT DTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGTSAASSP FT TIMRKSSGSPDSQHWKLTLAQLYRIRTTLLLNSTLTASEV" FT polyA_site complement(6581407) FT polyA_signal complement(6581425..6581430) FT polyA_site complement(6585727) FT polyA_site complement(6592289) FT mRNA complement(join(6592289..6592820,6593340..6593445)) FT /gene="NOL9" FT /locus_tag="RP11-58A11.1-005" FT /product="nucleolar protein 9" FT /note="match: ESTs: Em:CA424414.1" FT mRNA complement(join(6592055..6592139,6592523..6592820, FT 6593340..6593501,6601890..6601987,6604886..6605077)) FT /gene="NOL9" FT /locus_tag="RP11-58A11.1-004" FT /product="nucleolar protein 9" FT /note="match: ESTs: Em:BG167366.1 Em:BX282410.1 FT Em:W93241.1" FT CDS join(6607966..6608200,6608508..6608683) FT /pseudo FT /locus_tag="RP11-58A11.2-001" FT /product="ribosomal protein L34 (RPL34) pseudogene" FT /note="match: proteins: Sw:P11250 Sw:P49207 Sw:Q29223 FT Sw:Q7ZWJ7 Sw:Q90YT5 Sw:Q9D1R9 Tr:Q8QFW7" FT misc_feature 6609411..6609473 FT /note="Sequence from overlapping clone RP11-239P22 FT (AL159177). Assembly confirmed by restriction digest" FT mRNA complement(join(6609316..6609758,6610456..6610548)) FT /gene="NOL9" FT /locus_tag="RP11-58A11.1-003" FT /product="nucleolar protein 9" FT /note="match: ESTs: Em:CB984551.1" FT mRNA complement(join(6581407..6586063,6586756..6586889, FT 6589054..6589231,6592028..6592139,6592523..6592820, FT 6593340..6593501,6601890..6601987,6604886..6604982, FT 6605105..6605240,6609631..6609758,6610456..6610675, FT 6614167..6614595)) FT /gene="NOL9" FT /locus_tag="RP11-58A11.1-001" FT /product="nucleolar protein 9" FT /note="match: ESTs: Em:AA311866.1 Em:AA504370.1 FT Em:AA558693.1 Em:AI075717.1 Em:BE396475.1 Em:BE741368.1 FT Em:BF062604.1 Em:BG113536.1 Em:BG256289.1 Em:BI828678.1 FT Em:BM151159.1 Em:BM151160.1 Em:BM706932.1 Em:BM789852.1 FT Em:BM856367.1 Em:BX404942.1 Em:BX404943.1 Em:CA432392.1 FT Em:CA435061.1" FT /note="match: cDNAs: Em:AK091284.1 Em:AX746895.1 FT Em:BC009257.1 Em:BC012439.1" FT CDS complement(join(6585914..6586063,6586756..6586889, FT 6589054..6589231,6592028..6592139,6592523..6592820, FT 6593340..6593501,6601890..6601987,6604886..6604982, FT 6605105..6605240,6609631..6609758,6610456..6610675, FT 6614167..6614562)) FT /gene="NOL9" FT /locus_tag="RP11-58A11.1-001" FT /standard_name="OTTHUMP00000001049" FT /product="nucleolar protein 9" FT /note="match: proteins: Sw:Q5SY16 Tr:Q8C9A8 Tr:Q9D678" FT /protein_id="CAI16071.1" FT /translation="MADSGLLLKRGSCRSTWLRVRKARPQLILSRRPRRRLGSLRWCGR FT RRLRWRLLQAQASGVDWREGARQVSRAAAARRPNTATPSPIPSPTPASEPESEPELESA FT SSCHRPLLIPPVRPVGPGRALLLLPVEQGFTFSGICRVTCLYGQVQVFGFTISQGQPAQ FT DIFSVYTHSCLSIHALHYSQPEKSKKELKREARNLLKSHLNLDDRRWSMQNFSPQCSIV FT LLEHLKTATVNFITSYPGSSYIFVQESPTPQIKPEYLALRSVGIRREKKRKGLQLTEST FT LSALEELVNVSCEEVDGCPVILVCGSQDVGKSTFNRYLINHLLNSLPCVDYLECDLGQT FT EFTPPGCISLLNITEPVLGPPFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKR FT ESPLIVNTMGWVSDQGLLLLIDLIRLLSPSHVVQFRSDHSKYMPDLTPQYVDDMDGLYT FT KSKTKMRNRRFRLAAFADALEFADEEKESPVEFTGHKLIGVYTDFAFRITPRNRESHNK FT ILRDLSILSYLSQLQPPMPKPLSPLHSLTPYQVPFNAVALRITHSDVAPTHILYAVNAS FT WVGLCKIQDDVRGYTNGPILLAQTPICDCLGFGICRGIDMEKRLYHILTPVPPEELRTV FT NCLLVGAIAIPHCVLKCQRGIEGTVPYVTTDYNFKLPGASEKIGAREPEEAHKEKPYRR FT PKFCRKMK" FT mRNA complement(join(6609422..6609758,6614167..6614560)) FT /gene="NOL9" FT /locus_tag="RP11-58A11.1-002" FT /product="nucleolar protein 9" FT /note="match: ESTs: Em:AV721127.1 Em:AV722537.1" FT mRNA join(6615241..6615624,6630969..6631275,6634691..6635452, FT 6636475..6636687,6637010..6637130,6638713..6639817) FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-001" FT /product="taste receptor, type 1, member 1" FT /note="match: ESTs: Em:AA853967.1 Em:AI742401.1 FT Em:CA426652.1" FT /note="match: cDNAs: Em:AF301161.1 Em:AF301162.1 FT Em:AF337040.1 Em:AF387618.1" FT CDS join(6615434..6615624,6630969..6631275,6634691..6635452, FT 6636475..6636687,6637010..6637130,6638713..6639644) FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-001" FT /standard_name="OTTHUMP00000001581" FT /product="taste receptor, type 1, member 1" FT /note="match: proteins: Sw:Q7RTX1 Sw:Q99PG6" FT /protein_id="CAI16073.1" FT /translation="MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFP FT LHSGCLQVRHRPEVTLCDRSCSFNEHGYHLFQAMRLGVEEINNSTALLPNITLGYQLYD FT VCSDSANVYATLRVLSLPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFL FT VPMISYAASSETLSVKRQYPSFLRTIPNDKYQVETMVLLLQKFGWTWISLVGSSDDYGQ FT LGVQALENQATGQGICIAFKDIMPFSAQVGDERMQCLMRHLAQAGATVVVVFSSRQLAR FT VFFESVVLTNLTGKVWVASEAWALSRHITGVPGIQRIGMVLGVAIQKRAVPGLKAFEEA FT YARADKKAPRPCHKGSWCSSNQLCRECQAFMAHTMPKLKAFSMSSAYNAYRAVYAVAHG FT LHQLLGCASGACSRGRVYPWQLLEQIHKVHFLLHKDTVAFNDNRDPLSSYNIIAWDWNG FT PKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCF FT ECVPCGAGTFLNKSDLYRCQPCGKEEWAPEGSQTCFPRTVVFLALREHTSWVLLAANTL FT LLLLLLGTAGLFAWHLDTPVVRSAGGRLCFLMLGSLAAGSGSLYGFFGEPTRPACLLRQ FT ALFALGFTIFLSCLTVRSFQLIIIFKFSTKVPTFYHAWVQNHGAGLFVMISSAAQLLIC FT LTWLVVWTPLPAREYQRFPHLVMLECTETNSLGFILAFLYNGLLSISAFACSYLGKDLP FT ENYNEAKCVTFSLLFNFVSWIAFFTTASVYDGKYLPAANMMAGLSSLSSGFGGYFLPKC FT YVILCRPDLNSTEHFQASIQDYTRRCGST" FT misc_feature 6629877..6630137 FT /note="Sequence from overlapping clone RP11-239P22 FT (AL159177). Assembly confirmed by restriction digest" FT CDS join(<6631001..6631275,6634691..6635452,6638713..6638895) FT /codon_start=3 FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-002" FT /standard_name="OTTHUMP00000001582" FT /product="taste receptor, type 1, member 1" FT /note="match: proteins: Sw:Q7RTX1" FT /protein_id="CAI16074.1" FT /translation="FQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS FT LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMISYAASSETLSVK FT RQYPSFLRTIPNDKYQVETMVLLLQKFGWTWISLVGSSDDYGQLGVQALENQATGQGIC FT IAFKDIMPFSAQVGDERMQCLMRHLAQAGATVVVVFSSRQLARVFFESVVLTNLTGKVW FT VASEAWALSRHITGVPGIQRIGMVLGVAIQKRAVPGLKAFEEAYARADKKAPRPCHKGS FT WCSSNQLCRECQAFMAHTMPKLKAFSMSSAYNAYRAVYAVAHGLHQLLGCASGACSRGR FT VYPWQTSTDASLVGKKSGHLREARPASRALWCFWLCVSTPLGCCWQLTRCCCCCCLGLL FT ACLPGT" FT mRNA join(<6631001..6631275,6634691..6635452,6638713..6639486) FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-002" FT /product="taste receptor, type 1, member 1" FT /note="match: cDNAs: Em:AF387617.1" FT mRNA join(<6631001..6631275,6636475..6636687,6637010..6637130, FT 6639356..>6639486) FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-003" FT /product="taste receptor, type 1, member 1" FT /note="match: cDNAs: Em:AF387620.1" FT CDS join(<6631001..6631275,6636475..6636687,6637010..6637130, FT 6639356..>6639486) FT /codon_start=3 FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-003" FT /standard_name="OTTHUMP00000001583" FT /product="taste receptor, type 1, member 1" FT /note="match: proteins: Sw:Q7RTX1" FT /protein_id="CAI16075.1" FT /translation="FQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS FT LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLH FT KDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQV FT PKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSATWVRTCQRTTTRPNVSPSA FT CSSTSCPGSPSSPRPASTTASTCL" FT mRNA join(<6631001..6631275,6636475..6636687,6637010..6637130, FT 6638713..>6639486) FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-004" FT /product="taste receptor, type 1, member 1" FT /note="match: cDNAs: Em:AF387619.1" FT CDS join(<6631001..6631275,6636475..6636687,6637010..6637130, FT 6638713..>6639486) FT /codon_start=3 FT /gene="TAS1R1" FT /locus_tag="RP11-58A11.3-004" FT /standard_name="OTTHUMP00000001584" FT /product="taste receptor, type 1, member 1" FT /note="match: proteins: Sw:Q7RTX1" FT /protein_id="CAI16076.1" FT /translation="FQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLS FT LPGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMLLEQIHKVHFLLH FT KDTVAFNDNRDPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQV FT PKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSDLYRCQPCGKEEWAPEGSQT FT CFPRTVVFLALREHTSWVLLAANTLLLLLLLGTAGLFAWHLDTPVVRSAGGRLCFLMLG FT SLAAGSGSLYGFFGEPTRPACLLRQALFALGFTIFLSCLTVRSFQLIIIFKFSTKVPTF FT YHAWVQNHGAGLFVMISSAAQLLICLTWLVVWTPLPAREYQRFPHLVMLECTETNSLGF FT ILAFLYNGLLSISAFACSYLGKDLPENYNEAKCVTFSLLFNFVSWIAFFTTASVYDGKY FT LP" FT polyA_signal 6639797..6639802 FT polyA_site 6639817 FT mRNA join(6640061..6640109,6640601..6641359,6642118..>6642359) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-004" FT /product="zinc finger and BTB domain containing 48" FT /note="match: ESTs: Em:BF203689.1 Em:BG749003.1 FT Em:BI768848.1 Em:BX394152.1" FT mRNA join(6640077..6640130,6640601..6641359,6642118..>6642305) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-005" FT /product="zinc finger and BTB domain containing 48" FT /note="match: ESTs: Em:BI836172.1 Em:BM544150.1 FT Em:BX487258.1 Em:CD358885.1" FT mRNA join(6640108..6640196,6640601..6641359,6642118..6642359, FT 6645979..6646090,6646755..6646847,6647265..6647351, FT 6647538..6647692,6648120..6648256,6648338..6648502, FT 6648816..6648904,6648976..6649340) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-001" FT /product="zinc finger and BTB domain containing 48" FT /note="match: ESTs: Em:AA765826.1 Em:BF033273.1 FT Em:BI768562.1 Em:BQ672659.1 Em:BU162146.1 Em:BX283271.1 FT Em:BX363783.1 Em:BX441455.1 Em:CA306809.1 Em:CA748466.1 FT Em:CD673507.1 Em:H24264.1 Em:T29307.1" FT /note="match: cDNAs: Em:BC013573.2 Em:L16896.1" FT mRNA join(6640148..6640196,6642118..6642359,6645979..6646090, FT 6646755..6646847,6647265..6647351,6647538..6647692, FT 6648120..6648165) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-006" FT /product="zinc finger and BTB domain containing 48" FT /note="match: ESTs: Em:BI908418.1" FT CDS join(6640670..6641359,6642118..>6642305) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-005" FT /standard_name="OTTHUMP00000001576" FT /product="zinc finger and BTB domain containing 48" FT /protein_id="CAI16077.1" FT /translation="MDGSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLA FT CCSHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRV FT PEAVELCQSFKPKTSVGQAAGGQSGLGPPASQNVNSHVKEPAGLEEEEVSRTLGLVPRD FT QEPRGSHSPQRPQLHSPAQSEGPSSLCGKLKQALKPCPLEDKKPEDCKVPPRPLEAEGA FT QLQGGSNEWEVVVQVEDDGDGDYMSEPEAVLTRRKSNVIRKPCAAEPALSAGSLAAEPA FT ENRKGTAVPVE" FT CDS join(6640670..6641359,6642118..>6642359) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-004" FT /standard_name="OTTHUMP00000001575" FT /product="zinc finger and BTB domain containing 48" FT /protein_id="CAI16078.1" FT /translation="MDGSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLA FT CCSHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRV FT PEAVELCQSFKPKTSVGQAAGGQSGLGPPASQNVNSHVKEPAGLEEEEVSRTLGLVPRD FT QEPRGSHSPQRPQLHSPAQSEGPSSLCGKLKQALKPCPLEDKKPEDCKVPPRPLEAEGA FT QLQGGSNEWEVVVQVEDDGDGDYMSEPEAVLTRRKSNVIRKPCAAEPALSAGSLAAEPA FT ENRKGTAVPVECPTCHKKFLSKYYLKVHN" FT CDS join(6640670..6641359,6642118..6642359,6645979..6646090, FT 6646755..6646847,6647265..6647351,6647538..6647692, FT 6648120..6648256,6648338..6648502,6648816..6648904, FT 6648976..6649272) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-001" FT /standard_name="OTTHUMP00000001574" FT /product="zinc finger and BTB domain containing 48" FT /note="match: proteins: Sw:P10074" FT /protein_id="CAI16079.1" FT /translation="MDGSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLA FT CCSHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRV FT PEAVELCQSFKPKTSVGQAAGGQSGLGPPASQNVNSHVKEPAGLEEEEVSRTLGLVPRD FT QEPRGSHSPQRPQLHSPAQSEGPSSLCGKLKQALKPCPLEDKKPEDCKVPPRPLEAEGA FT QLQGGSNEWEVVVQVEDDGDGDYMSEPEAVLTRRKSNVIRKPCAAEPALSAGSLAAEPA FT ENRKGTAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEAR FT NCMNRSEQVFTCSVCQETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK FT LHGAPKPHACPTCAKCFLSRTELQLHEAFKHRGEKLFVCEECGHRASSRNGLQMHIKAK FT HRNERPHVCEFCSHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKHNRTHTG FT ERPFSCEFCEQRFTEKGPLLRHVASRHQEGRPHFCQICGKTFKAVEQLRVHVRRHKGVR FT KFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKLRNLIIEDEKMVVVALQPPAELE FT VGSAEVIVESLAQGGLASQLPGQRLCAEESFTGPGVLEPSLIITAAVPEDCDT" FT mRNA join(6645362..6646847,6647265..6647351,6647538..6647692, FT 6648120..6648256,6648338..6648502,6648816..6648904, FT 6648976..6649340) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-002" FT /product="zinc finger and BTB domain containing 48" FT /note="match: ESTs: Em:AL531725.2" FT /note="match: cDNAs: Em:BX648395.1" FT mRNA join(6646267..6647351,6647538..6647692,6648120..6649340) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-003" FT /product="zinc finger and BTB domain containing 48" FT /note="match: cDNAs: Em:AF318381.1" FT mRNA join(6647316..6647351,6647575..6647692,6648120..6648256, FT 6648338..6648502,6648816..6648904,6648976..6649220) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-007" FT /product="zinc finger and BTB domain containing 48" FT /note="match: ESTs: Em:CF457130.1" FT mRNA join(6648747..6648904,6648976..6649340) FT /gene="ZBTB48" FT /locus_tag="RP11-58A11.4-008" FT /product="zinc finger and BTB domain containing 48" FT /note="match: ESTs: Em:AI656996.1" FT mRNA join(AL031447.4:86278..86435,complement(6659107..6659512), FT complement(6655545..6655617),complement(6654141..6654170)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-003" FT /product="kelch-like 21 (Drosophila)" FT /note="match: ESTs: Em:BI462469.1" FT mRNA join(AL031447.4:86325..86435,complement(6659107..6659512), FT complement(6655545..6655617),complement(6653253..6653718)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-004" FT /product="kelch-like 21 (Drosophila)" FT /note="match: ESTs: Em:BM464388.1" FT polyA_signal 6649312..6649317 FT polyA_site 6649340 FT polyA_site complement(6650784) FT polyA_signal complement(6650799..6650804) FT mRNA complement(join(6653441..6653718,6655545..6655617, FT 6659107..6659512,6659810..6659876)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-005" FT /product="kelch-like 21 (Drosophila)" FT /note="match: ESTs: Em:BI821488.1" FT misc_feature 6661024..6661049 FT /note="Sequence from overlapping clone RP11-239P22 FT (AL159177). Assembly confirmed by restriction digest" FT mRNA complement(join(6650784..6653718,6655545..6655617, FT 6659107..6659512,6661857..6662929)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-001" FT /product="kelch-like 21 (Drosophila)" FT /note="match: ESTs: Em:AL524904.2 Em:BG681215.1 FT Em:BI037913.1 Em:BM463103.1 Em:BM664847.1 Em:BM982979.1 FT Em:BQ001204.1 Em:BQ433759.1 Em:BU500377.1 Em:BU623465.1 FT Em:BX485910.1 Em:CA412126.1 Em:CD654971.1" FT /note="match: cDNAs: Em:AK052203.1 Em:AK075305.1 FT Em:AK090472.1 Em:BC034039.1" FT CDS complement(join(6653425..6653718,6655545..6655617, FT 6659107..6659512,6661857..6662877)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-001" FT /standard_name="OTTHUMP00000001572" FT /product="kelch-like 21 (Drosophila)" FT /note="match: proteins: Tr:Q5SY28 Tr:Q8NF10" FT /protein_id="CAI16080.1" FT /translation="MERPAPLAVLPFSDPAHALSLLRGLSQLRAERKFLDVTLEAAGGR FT DFPAHRAVLAAASPYFRAMFAGQLRESRAERVRLHGVPPDMLQLLLDFSYTGRVAVSGD FT NAEPLLRAADLLQFPAVKEACGAFLQQQLDLANCLDMQDFAEAFSCSGLASAAQRFILR FT HVGELGAEQLERLPLARLLRYLRDDGLCVPKEEAAYQLALRWVRADPPRRAAHWPQLLE FT AVRLPFVRRFYLLAHVEAEPLVARCPPCLRLLREARDFQAARYDRHDRGPCPRMRPRPS FT TGLAEILVLVGGCDQDCDELVTVDCYNPQTGQWRYLAEFPDHLGGGYSIVALGNDIYVT FT GGSDGSRLYDCVWRYNSSVNEWAEVAPMLKAREYHSSSVLDGLLYVVAADSTERYDHTT FT DSWEALQPMTYPMDNCSTTACRGRLYAIGSLAGKETMVMQCYDPDTDLWSLVDCGQLPP FT WSFAPKTATLNGLMYFVRDDSAEVDVYNPTRNEWDKIPSMNQVHVGGSLAVLGGKLYVS FT GGYDNTFELSDVVEAYDPETRAWSVVGRLPEPTFWHGSVSIFRQFMPQTFSGGRGFELD FT SGSDDMDPGRPRPPRDPDELH" FT mRNA complement(join(6650784..6655617,6659107..6659512, FT 6661857..6663061)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-002" FT /product="kelch-like 21 (Drosophila)" FT /note="match: cDNAs: Em:AB007938.1" FT CDS complement(join(6655425..6655617,6659107..6659512, FT 6661857..6662877)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-002" FT /standard_name="OTTHUMP00000001573" FT /product="kelch-like 21 (Drosophila)" FT /note="match: proteins: Sw:Q9UJP4" FT /protein_id="CAI16082.1" FT /translation="MERPAPLAVLPFSDPAHALSLLRGLSQLRAERKFLDVTLEAAGGR FT DFPAHRAVLAAASPYFRAMFAGQLRESRAERVRLHGVPPDMLQLLLDFSYTGRVAVSGD FT NAEPLLRAADLLQFPAVKEACGAFLQQQLDLANCLDMQDFAEAFSCSGLASAAQRFILR FT HVGELGAEQLERLPLARLLRYLRDDGLCVPKEEAAYQLALRWVRADPPRRAAHWPQLLE FT AVRLPFVRRFYLLAHVEAEPLVARCPPCLRLLREARDFQAARYDRHDRGPCPRMRPRPS FT TGLAEILVLVGGCDQDCDELVTVDCYNPQTGQWRYLAEFPDHLGGGYSIVALGNDIYVT FT GGSDGSRLYDCVWRYNSSVNEWAEVAPMLKAREYHSSSVLDGLLYVVAADSTERYDHTT FT DSWEALQPMTYPMDNCSTTACRGRLYAIGSLAGKETMVMQCYDPDTDLWSLVDCGQLPP FT WSFAPKTATLNGLMYFVRDDSAEVDVYNPTRNEWDKIPSMNQVNFQAGQHWKHRLVLIL FT QPKCHRDECLGSTAMMGGSHLN" FT misc_feature 6663409 FT /note="Clone_right_end: RP11-58A11" FT misc_feature complement(6665410..6760944) FT /note="annotated region of clone" FT mRNA complement(join(6730521..6730970,6738454..6738527, FT 6740968..6741097,AL159177.13:2845..2935)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-007" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:BM798405.1 Em:BU602281.1" FT mRNA complement(join(6714168..6714347,6727769..6727870, FT 6738454..6738527,6740968..6741097,AL159177.13:2845..2939)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-006" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:AW268308.1 Em:BU537633.1" FT mRNA complement(join(6713869..6714099,6727769..6727870, FT 6738454..6738527,6740968..6741097,AL159177.13:2845..2920)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-010" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:AL698735.1" FT mRNA complement(join(6705936..6706038,6711589..6711662, FT 6712889..6713011,6713971..6714099,6727769..6727870, FT 6740968..6741097,AL159177.13:2845..2938)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-008" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:BI463425.1" FT mRNA complement(join(<6705860..6706038,6711077..6711240, FT 6712889..6713011,6713971..6714099,6727769..6727870, FT 6738454..6738527,6740968..6741097,AL159177.13:2845..2918)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-009" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:BM562943.1" FT CDS complement(join(<6705860..6706038,6711077..6711240, FT 6712889..6713011,6713971..6714099,6727769..6727870, FT 6738454..6738527,6740968..6741097,AL159177.13:2845..2916)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-009" FT /standard_name="OTTHUMP00000001708" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /protein_id="CAI19464.1" FT /translation="MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDK FT HRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIR FT EEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMH FT ISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGERMTDCLIIGLID FT ICQRCSPQPASASCRLCCCHVTLLELYIPVPSRTTAVSSFPICFVTTNCALQFSSRGIR FT PGLTTVLARNLDKNTVGYLQWRWGIQSAMNTSIVRDTKTSHFT" FT CDS complement(join(6695735..6695760,6696177..6696306, FT 6697258..6697400,6697507..6697564,6698355..6698424, FT 6699962..6700117,6704618..6704734,6705101..6705186, FT 6705849..6706038,6711589..6711662,6712889..6713011, FT 6713971..6714099,6727769..6727870,6738454..6738527, FT 6740968..6741097,AL159177.13:2845..2916)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-001" FT /standard_name="OTTHUMP00000001585" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: proteins: Sw:Q5U458 Sw:Q9NVH1 Tr:Q7SZY3" FT /protein_id="CAI19466.1" FT /translation="MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDK FT HRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIR FT EEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMH FT ISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPL FT FGLKLFRNLTPRCFVTTNCALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGIQSAMN FT TSIVRDTKTSHFTVALQLGIPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAE FT RKISRHSVLGAAVSVGVPQGVSLKVKLNRASQTYFFPIHLTDQLLPSAMFYATVGPLVV FT YFAMHRLIIKPYLRAQKEKELEKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEES FT RMGLIIVNAWYGKFVNDKSRKSEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDP FT CVGEEKNLKVLYQFRGVLHQVMVLDSEALRIPKQSHRIDTDG" FT CDS complement(join(6695735..6695760,6696177..6696306, FT 6697258..6697400,6697507..6697564,6698355..6698424, FT 6704618..6704734,6705101..6705186,6705849..6706038, FT 6711589..6711662,6712889..6713011,6713971..6714099, FT 6727769..6727870,6738454..6738527,6740968..6741097, FT AL159177.13:2845..2916)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-002" FT /standard_name="OTTHUMP00000001586" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: proteins: Sw:Q9NVH1" FT /protein_id="CAI19465.1" FT /translation="MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDK FT HRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIR FT EEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMH FT ISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPL FT FGLKLFRNLTPRCFVTTNCALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGIQSAMN FT TSIVRDTKTSHFTVALQLGIPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAE FT RKISRHSVLGAAVSVGVPQGVSLKVKELEKQRESAATDVLQKKQEAESAVRLMQESVRR FT IIEAEESRMGLIIVNAWYGKFVNDKSRKSEKVKVIDVTVPLQCLVKDSKLILTEASKAG FT LPGFYDPCVGEEKNLKVLYQFRGVLHQVMVLDSEALRIPKQSHRIDTDG" FT mRNA complement(join(6695173..6695760,6696177..6696306, FT 6697258..6697400,6697507..6697564,6698355..6698424, FT 6704618..6704734,6705101..6705186,6705849..6706038, FT 6711589..6711662,6712889..6713011,6713971..6714099, FT 6727769..6727870,6738454..6738527,6740968..6741097, FT AL159177.13:2845..3040)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-002" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: cDNAs: Em:BC014145.1" FT mRNA complement(join(6694228..6695760,6696177..6696306, FT 6697258..6697400,6697507..6697564,6698355..6698424, FT 6699962..6700117,6704618..6704734,6705101..6705186, FT 6705849..6706038,6711589..6711662,6712889..6713011, FT 6713971..6714099,6727769..6727870,6738454..6738527, FT 6740968..6741097,AL159177.13:2845..3040)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-001" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: cDNAs: Em:AF306694.1 Em:AF306695.1 FT Em:AK001599.1 Em:AL833841.1" FT /note="match: ESTs: Em:AA649997.1 Em:AI280130.1 FT Em:AL710684.1 Em:BE797440.1 Em:BF036417.1 Em:BF375976.1 FT Em:BG027348.1 Em:BG749220.1 Em:BI832194.1 Em:BQ026192.1 FT Em:BQ712401.1 Em:BQ880880.1 Em:BU150592.1 Em:BU599586.1 FT Em:BX481639.1 Em:BX490154.1 Em:BX490320.1 Em:BX491237.1 FT Em:CB268987.1 Em:R60577.1" FT CDS complement(join(6694586..6694844,6705931..6706038, FT 6711589..6711662,6712889..6713011,6713971..6714099, FT 6727769..6727870,6738454..6738527,6740968..>6741097)) FT /codon_start=1 FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-003" FT /standard_name="OTTHUMP00000001587" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: proteins: Tr:Q9UMU8" FT /protein_id="CAI19467.1" FT /translation="ASSEELKAAYRRLCMLYHPDKHRDPELKSQAERLFNLVHQAYEVL FT SDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIREEFERLQREREERRLQQRTNPKGT FT ISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMHISQSIEAPLTATDTAILSGSLSTQ FT NGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPLFGLKLFRNLTPRCFVTTNCALQFS FT SRGIRPGLTTVLARNLDKNTVGYLQWHCSSPLLQVQRPHRNTRACAPEPSFRPFLHVPT FT WDAECSGARTPSTAWTSAAVKLREACLSGPGSGSHQLLLLTPRSKRRTGGG" FT mRNA complement(join(6694228..6694844,6705931..6706038, FT 6711589..6711662,6712889..6713011,6713971..6714099, FT 6727769..6727870,6738454..6738527,6740968..>6741097)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-003" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:AA359216.1" FT /note="match: cDNAs: Em:AL109978.1" FT mRNA complement(join(6712974..6713011,6713971..6714099, FT 6727769..6727870,6728185..6728270)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-004" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: cDNAs: Em:AF306696.1" FT polyA_signal complement(6714183..6714188) FT polyA_site complement(6714168) FT mRNA complement(join(6697361..6697400,6697507..6697564, FT 6698143..6698424,6699962..6700117,6704618..6704734, FT 6705101..6705172)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-011" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:BG763162.1 Em:BG765466.1 FT Em:BM793205.1" FT mRNA complement(join(6694228..6695760,6696177..6696306, FT 6697258..6697400,6697507..6698424,6699962..6700117, FT 6704618..6704734,6705101..6705117)) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-005" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:AL040437.1" FT /note="match: cDNAs: Em:AK093709.1 Em:AK095386.1 FT Em:AX748271.1" FT polyA_site 6695646 FT polyA_signal 6695637..6695642 FT polyA_signal complement(6694245..6694250) FT polyA_site complement(6694228) FT polyA_site 6693625 FT polyA_signal 6693604..6693609 FT mRNA join(6688455..6688751,6690348..6690386) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-007" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT mRNA join(6685252..6685352,6688559..6688751,6690348..6690413, FT 6692430..6692555,6694080..6695646) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-008" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: ESTs: Em:AU143022.1 Em:CA425222.1" FT /note="match: cDNAs: Em:AF086370.1 Em:AK096217.1" FT CDS join(6685279..6685352,6688559..6688751,6690348..6690413, FT 6692430..6692555,6694080..6694148) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-008" FT /standard_name="OTTHUMP00000001580" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: proteins: Sw:Q8WTV1" FT /protein_id="CAI19468.1" FT /translation="MPKSCAARQCCNRYSSRRKQLTFHRFPFSRPELLKEWVLNIGRGN FT FKPKQHTVICSEHFRPECFSAFGNRKNLKHNAVPTVFAFQDPTQQVRENTDPASERGNA FT SSSQKEKTSPCRSQVLPEAGAGEDSPGRNMDTALEELQLPPNAEGHVKQAMLFNVENGT FT PASREALWLSEE" FT CDS join(6685279..6685352,6688559..6688751,6690348..6690413, FT 6692451..6692555,6692856..6693137) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-001" FT /standard_name="OTTHUMP00000001578" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: proteins: Sw:Q8WTV1" FT /protein_id="CAI19470.1" FT /translation="MPKSCAARQCCNRYSSRRKQLTFHRFPFSRPELLKEWVLNIGRGN FT FKPKQHTVICSEHFRPECFSAFGNRKNLKHNAVPTVFAFQDPTQQVRENTDPASERGNA FT SSSQKEKVLPEAGAGEDSPGRNMDTALEELQLPPNAEGHVKQVSPRRPQATEAVGRPTG FT PAGLRRTPNKQPSDHSYALLDLDSLKKKLFLTLKENEKLRKRLQAQRLVMRRMSSRLRA FT CKGHQGLQARLGPEQQS" FT mRNA join(6685258..6685352,6690348..6690413,6692451..6692555, FT 6692856..6693625) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-002" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: ESTs: Em:BM449602.1" FT mRNA join(6685241..6685352,6688559..6688751,6690351..6690413, FT 6692451..6692555,6692856..6693428) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-003" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: ESTs: Em:BI918548.1 Em:BM691509.1 FT Em:BX418796.1 Em:BX422989.1" FT CDS join(6685279..6685352,6688559..6688751,6690351..6690413, FT 6692451..6692555,6692856..6693137) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-003" FT /standard_name="OTTHUMP00000001579" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /protein_id="CAI19469.1" FT /translation="MPKSCAARQCCNRYSSRRKQLTFHRFPFSRPELLKEWVLNIGRGN FT FKPKQHTVICSEHFRPECFSAFGNRKNLKHNAVPTVFAFQDPTQVRENTDPASERGNAS FT SSQKEKVLPEAGAGEDSPGRNMDTALEELQLPPNAEGHVKQVSPRRPQATEAVGRPTGP FT AGLRRTPNKQPSDHSYALLDLDSLKKKLFLTLKENEKLRKRLQAQRLVMRRMSSRLRAC FT KGHQGLQARLGPEQQS" FT mRNA join(6685285..6685352,6688559..6688751,6689703..6689784, FT 6690348..6690413,6692451..6692555,6692856..6693181) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-004" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: ESTs: Em:BQ677253.1 Em:BQ681499.1 FT Em:BU190263.1" FT mRNA join(6685290..6685352,6688559..6688751,6690348..6690413, FT 6692451..6693111) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-005" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: ESTs: Em:BI918437.1 Em:BM919657.1" FT mRNA join(6685231..6685352,6687823..6688579) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-006" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: ESTs: Em:BM928294.1" FT mRNA join(6684926..6685014,6685210..6685352,6688559..6688751, FT 6690348..6690413,6692451..6692555,6692856..6693625) FT /gene="THAP3" FT /locus_tag="RP1-126A5.2-001" FT /product="THAP domain containing, apoptosis associated FT protein 3" FT /note="match: ESTs: Em:AI160971.1 Em:AI655657.1 FT Em:AI948832.1 Em:AL522188.2 Em:AL522189.2 Em:AL580801.2 FT Em:BE672540.1 Em:BG700517.1 Em:BI549151.1 Em:BM013538.1 FT Em:BM675516.1 Em:BM914289.1 Em:BQ056118.1 Em:CD245750.1" FT /note="match: cDNAs: Em:BC005114.1 Em:BC022081.2" FT polyA_site 6684093 FT polyA_site 6684057 FT polyA_signal 6684027..6684032 FT mRNA complement(join(AL591866.13:91271..91300, FT AL591866.13:92675..92747,AL591866.13:96237..96642, FT 6674510..6674667)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-003" FT /product="kelch-like 21 (Drosophila)" FT /note="match: ESTs: Em:BI462469.1" FT mRNA complement(join(AL591866.13:90383..90848, FT AL591866.13:92675..92747,AL591866.13:96237..96642, FT 6674510..6674620)) FT /gene="KLHL21" FT /locus_tag="RP11-58A11.5-004" FT /product="kelch-like 21 (Drosophila)" FT /note="match: ESTs: Em:BM464388.1" FT mRNA join(6673822..6674165,6682252..6682705) FT /gene="PHF13" FT /locus_tag="RP1-126A5.1-002" FT /product="PHD finger protein 13" FT /note="match: ESTs: Em:BU192775.1" FT mRNA join(6673745..6674165,6676817..6676918,6679863..6680397, FT 6681471..6684093) FT /gene="PHF13" FT /locus_tag="RP1-126A5.1-001" FT /product="PHD finger protein 13" FT /note="match: ESTs: Em:AI203396.1 Em:AI990215.1 FT Em:AW275047.1 Em:BE243456.1 Em:BE788462.1 Em:BE882934.1 FT Em:BQ007093.1 Em:BQ184442.1 Em:BX477393.1 Em:CD675446.1" FT /note="match: cDNAs: Em:AK027492.1 Em:AK097715.1 FT Em:AL121733.1 Em:BC029632.1 Em:BC038516.1" FT CDS join(6674127..6674165,6676817..6676918,6679863..6680397, FT 6681471..6681697) FT /gene="PHF13" FT /locus_tag="RP1-126A5.1-001" FT /standard_name="OTTHUMP00000001577" FT /product="PHD finger protein 13" FT /protein_id="CAI19471.1" FT /translation="MDSDSCAAAFHPEEYSPSCKRRRTVEDFNKFCTFVLAYAGYIPYP FT KEELPLRSSPSPANSTAGTIDSDGWDAGFSDIASSVPLPVSDRCFSHLQPTLLQRAKPS FT NFLLDRKKTDKLKKKKKRKRRDSDAPGKEGYRGGLLKLEAADPYVETPTSPTLQDIPQA FT PSDPCSGWDSDTPSSGSCATVSPDQVKEIKTEGKRTIVRQGKQVVFRDEDSTGNDEDIM FT VDSDDDSWDLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDSK FT FDIRRSNRSRTGSRKLFLD" FT misc_feature 6760945..6768856 FT /note="annotated region of clone" FT mRNA join(complement(6761789..6761879),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:29975..30424) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-007" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:BM798405.1 Em:BU602281.1" FT mRNA join(complement(6761789..6761883),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46598..46777) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-006" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:AW268308.1 Em:BU537633.1" FT mRNA join(complement(6761789..6761864),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46846..47076) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-010" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:AL698735.1" FT mRNA join(complement(6761789..6761882),AL031447.4:19848..19977, FT AL031447.4:33075..33176,AL031447.4:46846..46974, FT AL031447.4:47934..48056,AL031447.4:49283..49356, FT AL031447.4:54907..55009) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-008" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:BI463425.1" FT mRNA join(complement(6761789..6761862),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46846..46974,AL031447.4:47934..48056, FT AL031447.4:49705..49868,AL031447.4:54907..>55085) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-009" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: ESTs: Em:BM562943.1" FT CDS join(complement(6761789..6761860),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46846..46974,AL031447.4:47934..48056, FT AL031447.4:49705..49868,AL031447.4:54907..>55085) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-009" FT /standard_name="OTTHUMP00000001708" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /protein_id="CAH71591.1" FT /translation="MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDK FT HRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIR FT EEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMH FT ISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGERMTDCLIIGLID FT ICQRCSPQPASASCRLCCCHVTLLELYIPVPSRTTAVSSFPICFVTTNCALQFSSRGIR FT PGLTTVLARNLDKNTVGYLQWRWGIQSAMNTSIVRDTKTSHFT" FT CDS join(complement(6761789..6761860),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46846..46974,AL031447.4:47934..48056, FT AL031447.4:49283..49356,AL031447.4:54907..55096, FT AL031447.4:55759..55844,AL031447.4:56211..56327, FT AL031447.4:60828..60983,AL031447.4:62521..62590, FT AL031447.4:63381..63438,AL031447.4:63545..63687, FT AL031447.4:64639..64768,AL031447.4:65185..65210) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-001" FT /standard_name="OTTHUMP00000001585" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: proteins: Sw:Q5U458 Sw:Q9NVH1 Tr:Q7SZY3" FT /protein_id="CAH71592.1" FT /translation="MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDK FT HRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIR FT EEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMH FT ISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPL FT FGLKLFRNLTPRCFVTTNCALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGIQSAMN FT TSIVRDTKTSHFTVALQLGIPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAE FT RKISRHSVLGAAVSVGVPQGVSLKVKLNRASQTYFFPIHLTDQLLPSAMFYATVGPLVV FT YFAMHRLIIKPYLRAQKEKELEKQRESAATDVLQKKQEAESAVRLMQESVRRIIEAEES FT RMGLIIVNAWYGKFVNDKSRKSEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDP FT CVGEEKNLKVLYQFRGVLHQVMVLDSEALRIPKQSHRIDTDG" FT CDS join(complement(6761789..6761860),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46846..46974,AL031447.4:47934..48056, FT AL031447.4:49283..49356,AL031447.4:54907..55096, FT AL031447.4:55759..55844,AL031447.4:56211..56327, FT AL031447.4:62521..62590,AL031447.4:63381..63438, FT AL031447.4:63545..63687,AL031447.4:64639..64768, FT AL031447.4:65185..65210) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-002" FT /standard_name="OTTHUMP00000001586" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: proteins: Sw:Q9NVH1" FT /protein_id="CAH71593.1" FT /translation="MATALSEEELDNEDYYSLLNVRREASSEELKAAYRRLCMLYHPDK FT HRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDIYGKRGLEMEGWEVVERRRTPAEIR FT EEFERLQREREERRLQQRTNPKGTISVGVDATDLFDRYDEEYEDVSGSSFPQIEINKMH FT ISQSIEAPLTATDTAILSGSLSTQNGNGGGSINFALRRVTSAKGWGELEFGAGDLQGPL FT FGLKLFRNLTPRCFVTTNCALQFSSRGIRPGLTTVLARNLDKNTVGYLQWRWGIQSAMN FT TSIVRDTKTSHFTVALQLGIPHSFALISYQHKFQDDDQTRVKGSLKAGFFGTVVEYGAE FT RKISRHSVLGAAVSVGVPQGVSLKVKELEKQRESAATDVLQKKQEAESAVRLMQESVRR FT IIEAEESRMGLIIVNAWYGKFVNDKSRKSEKVKVIDVTVPLQCLVKDSKLILTEASKAG FT LPGFYDPCVGEEKNLKVLYQFRGVLHQVMVLDSEALRIPKQSHRIDTDG" FT mRNA join(complement(6761789..6761984),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46846..46974,AL031447.4:47934..48056, FT AL031447.4:49283..49356,AL031447.4:54907..55096, FT AL031447.4:55759..55844,AL031447.4:56211..56327, FT AL031447.4:62521..62590,AL031447.4:63381..63438, FT AL031447.4:63545..63687,AL031447.4:64639..64768, FT AL031447.4:65185..65772) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-002" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: cDNAs: Em:BC014145.1" FT mRNA join(complement(6761789..6761984),AL031447.4:19848..19977, FT AL031447.4:22418..22491,AL031447.4:33075..33176, FT AL031447.4:46846..46974,AL031447.4:47934..48056, FT AL031447.4:49283..49356,AL031447.4:54907..55096, FT AL031447.4:55759..55844,AL031447.4:56211..56327, FT AL031447.4:60828..60983,AL031447.4:62521..62590, FT AL031447.4:63381..63438,AL031447.4:63545..63687, FT AL031447.4:64639..64768,AL031447.4:65185..66717) FT /gene="DNAJC11" FT /locus_tag="RP1-126A5.3-001" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 11" FT /note="match: cDNAs: Em:AF306694.1 Em:AF306695.1 FT Em:AK001599.1 Em:AL833841.1" FT /note="match: ESTs: Em:AA649997.1 Em:AI280130.1 FT Em:AL710684.1 Em:BE797440.1 Em:BF036417.1 Em:BF375976.1 FT Em:BG027348.1 Em:BG749220.1 Em:BI832194.1 Em:BQ026192.1 FT Em:BQ712401.1 Em:BQ880880.1 Em:BU150592.1 Em:BU599586.1 FT Em:BX481639.1 Em:BX490154.1 Em:BX490320.1 Em:BX491237.1 FT Em:CB268987.1 Em:R60577.1" FT misc_feature 6766856 FT /note="Clone_right_end: RP11-239P22" FT misc_feature 6768857..6836675 FT /note="annotated region of clone" FT mRNA join(6784697..6784910,6785997..6787468) FT /locus_tag="RP11-242F24.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC039095.1" FT mRNA join(6784697..6784910,6789780..6790072) FT /locus_tag="RP11-242F24.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA398864.1" FT mRNA join(6787587..6787672,6789780..6790072) FT /locus_tag="RP11-242F24.1-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AW241724.1" FT polyA_signal 6790044..6790049 FT polyA_site 6790072 FT misc_feature 6800618 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1400bp by restriction digest data" FT misc_feature 6813328..6813500 FT /note="Sequence from uni-directional primer reads only. FT Assembly confirmed by restriction digest data" FT misc_feature 6833111..6833178 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 6836676..7041069 FT /note="annotated region of clone" FT misc_feature 6836676 FT /note="Clone_left_end: RP11-312B8" FT polyA_site complement(6843952) FT polyA_signal complement(6843967..6843972) FT mRNA complement(join(6843952..6844105,6844209..6844283, FT 6844718..6844903)) FT /locus_tag="RP11-312B8.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM670173.1" FT mRNA join(6845384..6845635,6880241..6880310,6885152..6885270, FT Z97635.10:14059..14126,Z98052.1:85246..85381, FT AL365194.15:36142..36213,AL596210.20:86653..86806, FT AL359881.28:2867..3007,AL359881.28:4494..6340, FT AL359881.28:12052..12178,AL359881.28:18740..18874, FT Z98884.11:9667..9818,Z98884.11:13563..13759, FT Z98884.11:14150..14228,Z98884.11:14474..14789, FT Z98884.11:15178..15701,Z98884.11:22054..22241, FT Z98884.11:23064..23310,Z98884.11:24929..25000, FT Z98884.11:28418..28611,Z98884.11:29678..29752, FT Z98884.11:32857..32887,Z98884.11:43678..46923) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AB020640.3 Em:BC051341.1" FT mRNA join(6845514..6845635,6885152..6885270,6931817..6932113) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-009" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BG622190.1" FT mRNA join(6845524..6845635,6885152..6885270,6931817..6931900, FT 6947714..6948261) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-002" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BM470492.1" FT mRNA join(6845540..6845635,6880241..6880310,6885152..6885270, FT 6931817..6932098) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-010" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BU507464.1" FT mRNA join(6845578..6845635,6867048..6867148,6885152..6885270, FT 6931817..6932079) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-003" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BU941906.1" FT CDS join(6845591..6845635,6880241..6880310,6885152..6885270, FT Z97635.10:14059..14126,Z98052.1:85246..85381, FT AL365194.15:36142..36213,AL596210.20:86653..86806, FT AL359881.28:2867..3007,AL359881.28:4494..6340, FT AL359881.28:12052..12178,AL359881.28:18740..18874, FT Z98884.11:9667..9818,Z98884.11:13563..13759, FT Z98884.11:14150..14228,Z98884.11:14474..14789, FT Z98884.11:15178..15701,Z98884.11:22054..22241, FT Z98884.11:23064..23310,Z98884.11:24929..25000, FT Z98884.11:28418..28611,Z98884.11:29678..29752, FT Z98884.11:32857..32887,Z98884.11:43678..43710) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /standard_name="OTTHUMP00000001352" FT /product="calmodulin binding transcription activator 1" FT /note="match: proteins: Sw:Q9Y6Y1 Tr:Q6V701 Tr:Q7Z7P1 FT Tr:Q80TQ8 Tr:Q8WYI3" FT /protein_id="CAH72347.1" FT /translation="MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSN FT SSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQN FT GSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHR FT RCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMF FT HGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNSA FT KHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSS FT TEVSSTNQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATV FT FMSEVTNEAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPT FT NVSEELVLSTTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKAEMVSSNIRHSPP FT GERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSLTLTAGSSLLPSGGGLS FT PSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQNTHSSL FT SDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMET FT SQAAEGSEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLG FT NASNMELSLDHFDISFSNQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARA FT PFTQAEMCLPCCSPQQGSLQLSSSEGGASTMAYMHVAEVVSAASAQGTLGMLQQSGRVF FT MVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDT FT GLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERR FT MAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSR FT ACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVD FT HFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL FT QRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRPR FT SEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP FT ETLSPSEGVRDFSRELSPPTPETAAFQASGSQPVGKWNSKDLYIGVSTVQVTGNPKGTS FT VGKEAAPSQVRPREPMSVLMMANREVVNTELGSYRDSAENEECGQPMDDIQVNMMTLAE FT HIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIRSAYN FT EPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHE FT QRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQS FT KFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQ FT AARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT" FT mRNA join(6845612..6845635,6880241..6880310,6885152..6885270, FT 6931817..6931900,6947714..6947847) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-005" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BG027118.1" FT misc_feature 6845732..6845798 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(6867048..6867148,6880241..6880310,6885152..6885270, FT 6931817..6931918) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-004" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:H71092.1" FT mRNA join(6885170..6885270,6946300..6946406,6947714..6948248) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-012" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BG186608.1" FT misc_feature 6888254 FT /note="Clone_right_end: RP11-242F24" FT CDS complement(6894393..6894678) FT /pseudo FT /locus_tag="RP11-312B8.2-001" FT /product="ribosomal protein L37 (RPL37) pseudogene" FT /note="match: proteins: Sw:P61928 Tr:Q9D823" FT mRNA join(6913108..6913249,6931817..6931900,6947714..6948253) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-006" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BG220948.1" FT mRNA join(6913112..6913249,6931817..6931900,6946300..6946406, FT 6947714..6948210) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-007" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BG212651.1" FT mRNA join(6913155..6913249,6931817..6932105) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-008" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:AI241230.1" FT misc_feature 6918280 FT /note="Clone_left_end: RP11-334N17" FT polyA_signal 6932075..6932080 FT polyA_site 6932109 FT mRNA join(6934116..6934483,6946300..6946406,6947714..6947902) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-011" FT /product="calmodulin binding transcription activator 1" FT /note="match: ESTs: Em:BE315403.1" FT polyA_signal 6948242..6948247 FT polyA_site 6948261 FT misc_feature 6997621 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 250bp by restriction digest data" FT misc_feature 7041069 FT /note="Clone_right_end: RP11-312B8" FT misc_feature 7041070..7100574 FT /note="annotated region of clone" FT misc_feature 7042151 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 250bp by restriction digest data" FT mRNA complement(join(7068436..7068756,7074312..7074339)) FT /locus_tag="RP11-334N17.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW197680.1" FT misc_feature 7098574 FT /note="Clone_right_end: RP11-334N17" FT misc_feature 7100575..7139305 FT /note="annotated region of clone" FT misc_feature 7124338..7124350 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 7135306 FT /note="Clone_left_end: RP3-438L4" FT misc_feature 7139306..7224405 FT /note="annotated region of clone" FT mRNA join(AL590128.11:8709..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,7151364..7151431, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..46923) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AB020640.3 Em:BC051341.1" FT CDS join(AL590128.11:8916..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,7151364..7151431, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..43710) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /standard_name="OTTHUMP00000001352" FT /product="calmodulin binding transcription activator 1" FT /note="match: proteins: Sw:Q9Y6Y1 Tr:Q6V701 Tr:Q7Z7P1 FT Tr:Q80TQ8 Tr:Q8WYI3" FT /protein_id="CAI20961.1" FT /translation="MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSN FT SSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQN FT GSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHR FT RCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMF FT HGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNSA FT KHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSS FT TEVSSTNQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATV FT FMSEVTNEAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPT FT NVSEELVLSTTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKAEMVSSNIRHSPP FT GERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSLTLTAGSSLLPSGGGLS FT PSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQNTHSSL FT SDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMET FT SQAAEGSEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLG FT NASNMELSLDHFDISFSNQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARA FT PFTQAEMCLPCCSPQQGSLQLSSSEGGASTMAYMHVAEVVSAASAQGTLGMLQQSGRVF FT MVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDT FT GLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERR FT MAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSR FT ACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVD FT HFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL FT QRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRPR FT SEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP FT ETLSPSEGVRDFSRELSPPTPETAAFQASGSQPVGKWNSKDLYIGVSTVQVTGNPKGTS FT VGKEAAPSQVRPREPMSVLMMANREVVNTELGSYRDSAENEECGQPMDDIQVNMMTLAE FT HIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIRSAYN FT EPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHE FT QRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQS FT KFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQ FT AARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT" FT misc_feature 7224406..7336772 FT /note="annotated region of clone" FT mRNA join(AL590128.11:8709..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT 7309551..7309686,AL365194.15:36142..36213, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..46923) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AB020640.3 Em:BC051341.1" FT CDS join(AL590128.11:8916..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT 7309551..7309686,AL365194.15:36142..36213, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..43710) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /standard_name="OTTHUMP00000001352" FT /product="calmodulin binding transcription activator 1" FT /note="match: proteins: Sw:Q9Y6Y1 Tr:Q6V701 Tr:Q7Z7P1 FT Tr:Q80TQ8 Tr:Q8WYI3" FT /protein_id="CAI21596.1" FT /translation="MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSN FT SSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQN FT GSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHR FT RCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMF FT HGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNSA FT KHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSS FT TEVSSTNQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATV FT FMSEVTNEAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPT FT NVSEELVLSTTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKAEMVSSNIRHSPP FT GERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSLTLTAGSSLLPSGGGLS FT PSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQNTHSSL FT SDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMET FT SQAAEGSEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLG FT NASNMELSLDHFDISFSNQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARA FT PFTQAEMCLPCCSPQQGSLQLSSSEGGASTMAYMHVAEVVSAASAQGTLGMLQQSGRVF FT MVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDT FT GLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERR FT MAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSR FT ACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVD FT HFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL FT QRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRPR FT SEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP FT ETLSPSEGVRDFSRELSPPTPETAAFQASGSQPVGKWNSKDLYIGVSTVQVTGNPKGTS FT VGKEAAPSQVRPREPMSVLMMANREVVNTELGSYRDSAENEECGQPMDDIQVNMMTLAE FT HIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIRSAYN FT EPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHE FT QRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQS FT KFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQ FT AARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT" FT misc_feature 7336773..7491848 FT /note="annotated region of clone" FT mRNA join(7429003..7429177,7430142..7430331) FT /locus_tag="RP3-453P22.1-001" FT /product="putative novel transcript" FT polyA_signal 7430296..7430301 FT polyA_site 7430331 FT polyA_site complement(7448243) FT polyA_signal complement(7448259..7448264) FT mRNA complement(join(7448243..7448553,7449400..7449479)) FT /locus_tag="RP3-453P22.2-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI126341.1" FT mRNA complement(join(7442548..7442783,7449400..7449499, FT 7449719..7449814)) FT /locus_tag="RP3-453P22.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA884520.1" FT misc_feature 7491849..7555496 FT /note="annotated region of clone" FT mRNA join(AL590128.11:8709..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,7527890..7527961, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..46923) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AB020640.3 Em:BC051341.1" FT CDS join(AL590128.11:8916..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,7527890..7527961, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..43710) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /standard_name="OTTHUMP00000001352" FT /product="calmodulin binding transcription activator 1" FT /note="match: proteins: Sw:Q9Y6Y1 Tr:Q6V701 Tr:Q7Z7P1 FT Tr:Q80TQ8 Tr:Q8WYI3" FT /protein_id="CAI21790.1" FT /translation="MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSN FT SSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQN FT GSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHR FT RCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMF FT HGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNSA FT KHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSS FT TEVSSTNQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATV FT FMSEVTNEAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPT FT NVSEELVLSTTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKAEMVSSNIRHSPP FT GERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSLTLTAGSSLLPSGGGLS FT PSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQNTHSSL FT SDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMET FT SQAAEGSEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLG FT NASNMELSLDHFDISFSNQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARA FT PFTQAEMCLPCCSPQQGSLQLSSSEGGASTMAYMHVAEVVSAASAQGTLGMLQQSGRVF FT MVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDT FT GLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERR FT MAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSR FT ACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVD FT HFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL FT QRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRPR FT SEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP FT ETLSPSEGVRDFSRELSPPTPETAAFQASGSQPVGKWNSKDLYIGVSTVQVTGNPKGTS FT VGKEAAPSQVRPREPMSVLMMANREVVNTELGSYRDSAENEECGQPMDDIQVNMMTLAE FT HIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIRSAYN FT EPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHE FT QRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQS FT KFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQ FT AARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT" FT mRNA complement(join(7501156..7501241,7501340..7501614)) FT /locus_tag="RP4-549F15.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA625511.1" FT misc_feature 7507397..7507462 FT /note="Sequence confirmed by AC073482 sequenced by WUGSC" FT misc_feature 7516144..7516471 FT /note="Sequence from AC073482 sequenced by WUGSC" FT misc_feature 7516555 FT /note="Clone_left_end: RP5-1045M14" FT misc_feature 7539256..7539381 FT /note="Sequence from overlapping clone dJ1045M14 FT (AL157716).Assembly confirmed by restriction digest" FT misc_feature 7539997..7540239 FT /note="Sequence from overlapping clone dJ1045M14 FT (AL157716).Assembly confirmed by restriction digest" FT misc_feature 7540395..7540474 FT /note="Sequence from overlapping clone dJ1045M14 FT (AL157716).Assembly confirmed by restriction digest" FT misc_feature 7540475..7540605 FT /note="Sequence from overlapping clone dJ1045M14 FT (AL157716).Assembly confirmed by restriction digest" FT misc_feature 7553470..7553683 FT /note="Sequence from overlapping clone dJ1045M14 FT (AL157716).Assembly confirmed by restriction digest" FT misc_feature 7555396 FT /note="Clone_right_end: RP4-549F15" FT misc_feature 7555497..7615807 FT /note="annotated region of clone" FT misc_feature 7611808 FT /note="Clone_left_end: RP11-92O17" FT misc_feature 7615808..7720919 FT /note="annotated region of clone" FT mRNA join(AL590128.11:8709..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT 7700460..7700613,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..46923) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AB020640.3 Em:BC051341.1" FT CDS join(AL590128.11:8916..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT 7700460..7700613,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..43710) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /standard_name="OTTHUMP00000001352" FT /product="calmodulin binding transcription activator 1" FT /note="match: proteins: Sw:Q9Y6Y1 Tr:Q6V701 Tr:Q7Z7P1 FT Tr:Q80TQ8 Tr:Q8WYI3" FT /protein_id="CAI17064.1" FT /translation="MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSN FT SSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQN FT GSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHR FT RCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMF FT HGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNSA FT KHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSS FT TEVSSTNQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATV FT FMSEVTNEAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPT FT NVSEELVLSTTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKAEMVSSNIRHSPP FT GERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSLTLTAGSSLLPSGGGLS FT PSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQNTHSSL FT SDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMET FT SQAAEGSEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLG FT NASNMELSLDHFDISFSNQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARA FT PFTQAEMCLPCCSPQQGSLQLSSSEGGASTMAYMHVAEVVSAASAQGTLGMLQQSGRVF FT MVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDT FT GLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERR FT MAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSR FT ACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVD FT HFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL FT QRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRPR FT SEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP FT ETLSPSEGVRDFSRELSPPTPETAAFQASGSQPVGKWNSKDLYIGVSTVQVTGNPKGTS FT VGKEAAPSQVRPREPMSVLMMANREVVNTELGSYRDSAENEECGQPMDDIQVNMMTLAE FT HIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIRSAYN FT EPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHE FT QRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQS FT KFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQ FT AARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT" FT misc_feature 7626369..7626438 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 7626740..7626868 FT /note="Single clone region. Sequence from overlapping clone FT RP5-1045M14 (AL157716). Sequence from uni-directional FT primer reads only. Assembly confirmed by restriction FT digest" FT misc_feature 7626964..7627151 FT /note="Sequence from clone PCR only" FT misc_feature 7657010 FT /note="Clone_right_end: RP5-1045M14" FT misc_feature 7716920 FT /note="Clone_left_end: RP11-338N10" FT misc_feature 7720920..7784841 FT /note="annotated region of clone" FT mRNA join(AL590128.11:8709..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT AL596210.20:86653..86806,7721786..7721926,7723413..7725259, FT 7730971..7731097,7737659..7737793,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..46923) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AB020640.3 Em:BC051341.1" FT CDS join(AL590128.11:8916..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT AL596210.20:86653..86806,7721786..7721926,7723413..7725259, FT 7730971..7731097,7737659..7737793,Z98884.11:9667..9818, FT Z98884.11:13563..13759,Z98884.11:14150..14228, FT Z98884.11:14474..14789,Z98884.11:15178..15701, FT Z98884.11:22054..22241,Z98884.11:23064..23310, FT Z98884.11:24929..25000,Z98884.11:28418..28611, FT Z98884.11:29678..29752,Z98884.11:32857..32887, FT Z98884.11:43678..43710) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /standard_name="OTTHUMP00000001352" FT /product="calmodulin binding transcription activator 1" FT /note="match: proteins: Sw:Q9Y6Y1 Tr:Q6V701 Tr:Q7Z7P1 FT Tr:Q80TQ8 Tr:Q8WYI3" FT /protein_id="CAH72663.1" FT /translation="MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSN FT SSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQN FT GSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHR FT RCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMF FT HGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNSA FT KHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSS FT TEVSSTNQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATV FT FMSEVTNEAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPT FT NVSEELVLSTTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKAEMVSSNIRHSPP FT GERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSLTLTAGSSLLPSGGGLS FT PSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQNTHSSL FT SDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMET FT SQAAEGSEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLG FT NASNMELSLDHFDISFSNQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARA FT PFTQAEMCLPCCSPQQGSLQLSSSEGGASTMAYMHVAEVVSAASAQGTLGMLQQSGRVF FT MVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDT FT GLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERR FT MAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSR FT ACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVD FT HFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL FT QRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRPR FT SEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP FT ETLSPSEGVRDFSRELSPPTPETAAFQASGSQPVGKWNSKDLYIGVSTVQVTGNPKGTS FT VGKEAAPSQVRPREPMSVLMMANREVVNTELGSYRDSAENEECGQPMDDIQVNMMTLAE FT HIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIRSAYN FT EPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHE FT QRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQS FT KFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQ FT AARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT" FT misc_feature 7780842 FT /note="Clone_left_end: RP3-467L1" FT misc_feature 7784842..7945568 FT /note="annotated region of clone" FT mRNA join(AL590128.11:8709..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,7792508..7792659,7796404..7796600, FT 7796991..7797069,7797315..7797630,7798019..7798542, FT 7804895..7805082,7805905..7806151,7807770..7807841, FT 7811259..7811452,7812519..7812593,7815698..7815728, FT 7826519..7829764) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AB020640.3 Em:BC051341.1" FT CDS join(AL590128.11:8916..8960,AL590128.11:43566..43635, FT AL590128.11:48477..48595,Z97635.10:14059..14126, FT Z98052.1:85246..85381,AL365194.15:36142..36213, FT AL596210.20:86653..86806,AL359881.28:2867..3007, FT AL359881.28:4494..6340,AL359881.28:12052..12178, FT AL359881.28:18740..18874,7792508..7792659,7796404..7796600, FT 7796991..7797069,7797315..7797630,7798019..7798542, FT 7804895..7805082,7805905..7806151,7807770..7807841, FT 7811259..7811452,7812519..7812593,7815698..7815728, FT 7826519..7826551) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-001" FT /standard_name="OTTHUMP00000001352" FT /product="calmodulin binding transcription activator 1" FT /note="match: proteins: Sw:Q9Y6Y1 Tr:Q6V701 Tr:Q7Z7P1 FT Tr:Q80TQ8 Tr:Q8WYI3" FT /protein_id="CAI21433.1" FT /translation="MWRAEGKWLPKTSRKSVSQSVFCGTSTYCVLNTVPPIEDDHGNSN FT SSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQN FT GSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHR FT RCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMF FT HGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGGSVHHKCNSA FT KHRIISPKVEPRTGGYGSHSEVQHNDVSEGKHEHSHSKGSSREKRNGKVAKPVLLHQSS FT TEVSSTNQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSGMAVASVMGSLSQSATV FT FMSEVTNEAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTTGSSESLSMLPT FT NVSEELVLSTTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKAEMVSSNIRHSPP FT GERSFSFTTVLTKEIKTEDTSFEQQMAKEAYSSSAAAVAASSLTLTAGSSLLPSGGGLS FT PSTTLEQMDFSAIDSNKDYTSSFSQTGHSPHIHQTPSPSFFLQDASKPLPVEQNTHSSL FT SDSGGTFVMPTVKTEASSQTSSCSGHVETRIESTSSLHLMQFQANFQAMTAEGEVTMET FT SQAAEGSEVLLKSGELQACSSEHYLQPETNGVIRSAGGVPILPGNVVQGLYPVAQPSLG FT NASNMELSLDHFDISFSNQFSDLINDFISVEGGSSTIYGHQLVSGDSTALSQSEDGARA FT PFTQAEMCLPCCSPQQGSLQLSSSEGGASTMAYMHVAEVVSAASAQGTLGMLQQSGRVF FT MVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDT FT GLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERR FT MAEMTGSQQHKQASGGGSSGGGSGSGNGGSQAQCASGTGALGSCFESRVVVVCEKMMSR FT ACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVD FT HFSCTPLMWACALGHLEAAVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHL FT QRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRPR FT SEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP FT ETLSPSEGVRDFSRELSPPTPETAAFQASGSQPVGKWNSKDLYIGVSTVQVTGNPKGTS FT VGKEAAPSQVRPREPMSVLMMANREVVNTELGSYRDSAENEECGQPMDDIQVNMMTLAE FT HIIEATPDRIKQENFVPMESSGLERTDPATISSTMSWLASYLADADCLPSAAQIRSAYN FT EPLTPSSNTSLSPVGSPVSEIAFEKPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHE FT QRELYEAARLVQTAFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQS FT KFRSYYEQKKFQQSRRAAVLIQKYYRSYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQ FT AARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT" FT mRNA join(7796468..7796600,7796991..7797069,7797315..7797630, FT 7798019..7798542,7804895..7805082,7805905..7806151, FT 7807770..7807841,7809831..7809851,7811259..7811452, FT 7812519..7812593,7826519..7827916) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-014" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:BC051341.1" FT mRNA join(7804974..7805082,7805947..7806151,7807770..7807841, FT 7811259..7811452,7812519..7812593,7826519..7827916) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-013" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AF111804.1" FT mRNA join(7805021..7805082,7805905..7806151,7807770..7807841, FT 7811259..7811452,7812519..7812593,7826519..7826582) FT /gene="CAMTA1" FT /locus_tag="RP3-467L1.1-015" FT /product="calmodulin binding transcription activator 1" FT /note="match: cDNAs: Em:AY349360.1" FT polyA_signal 7829740..7829745 FT polyA_site 7829764 FT mRNA join(7831329..7831445,7833502..7833571,7837220..7837378, FT 7838178..7838229,7839686..7841492) FT /gene="VAMP3" FT /locus_tag="RP3-467L1.2-001" FT /product="vesicle-associated membrane protein 3 FT (cellubrevin)" FT /note="match: cDNAs: Em:BC003570.1 Em:BC005941.1 FT Em:BC007050.1 Em:U64520.1" FT CDS join(7831444..7831445,7833502..7833571,7837220..7837378, FT 7838178..7838229,7839686..7839705) FT /gene="VAMP3" FT /locus_tag="RP3-467L1.2-001" FT /standard_name="OTTHUMP00000001361" FT /product="vesicle-associated membrane protein 3 FT (cellubrevin)" FT /protein_id="CAB63146.1" FT /translation="MSTGPTAATGSNRRLQQTQNQVDEVVDIMRVNVDKVLERDQKLSE FT LDDRADALQAGASQFETSAAKLKRKYWWKNCKMWAIGITVLVIFIIIIIVWVVSS" FT mRNA join(7832767..7833258,7833502..7833571,7837220..7837378, FT 7838178..7838229,7839686..7839866) FT /gene="VAMP3" FT /locus_tag="RP3-467L1.2-002" FT /product="vesicle-associated membrane protein 3 FT (cellubrevin)" FT /note="match: ESTs: Em:AU124684.1 Em:BF916178.1 FT Em:BG762463.1" FT mRNA join(7837157..7837378,7838178..7838229) FT /gene="VAMP3" FT /locus_tag="RP3-467L1.2-003" FT /product="vesicle-associated membrane protein 3 FT (cellubrevin)" FT /note="match: ESTs: Em:BE893912.1" FT polyA_signal 7841471..7841476 FT polyA_site 7841492 FT misc_feature 7842294..7842347 FT /note="weak data" FT mRNA join(7844380..7844436,7844714..7845065,7845501..7845646, FT 7846781..7846896,7848105..7848306,7854020..7854068, FT 7858585..7858733,7861173..7861251,7863107..7863213, FT 7863752..7864018) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-003" FT /product="period homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:BC026102.1" FT mRNA join(7844714..7845065,7845501..7845646,7846781..7846896, FT 7848105..7848306,7854017..7854068,7858585..7858733, FT 7861173..7861251,7863107..7863213,7863752..7863908, FT 7868953..7869058,7869953..7870081,7870498..7870648, FT 7879345..7879480,7880175..7880299,7880527..7880700, FT 7886540..7886770,7887178..7887875,7889894..7890221, FT 7895822..7896005,7897059..7897209,7902732..7905237) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-001" FT /product="period homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB047686.1" FT mRNA join(7844763..7845065,7845501..7845646,7846781..7846896, FT 7848105..7848306,7854020..7854068,7858585..7858733, FT 7861173..7861251,7863107..7863213,7863752..7863908, FT 7868953..7869058,7869953..7870081,7870498..7870627, FT 7879345..7879480,7880175..7880299,7880527..7880700, FT 7886540..7886770,7887178..7887875,7889897..7890221, FT 7895822..7896005,7897059..7897209,7902732..7905237) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-002" FT /product="period homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AL157954.1" FT CDS join(7844938..7845065,7845501..7845646,7846781..7846896, FT 7848105..7848306,7854020..7854068,7858585..7858733, FT 7861173..7861251,7863107..7863213,7863752..7863912) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-003" FT /standard_name="OTTHUMP00000001355" FT /product="period homolog 3 (Drosophila)" FT /protein_id="CAI21434.1" FT /translation="MPRGEAPGPGRRGAKDEALGEESGERWSPEFHLQRKLADSSHSEQ FT QDRNRVSEELIMVVQEMKKYFPSERRNKPSTLDALNYALRCVHSVQANSEFFQILSQNG FT APQADVSMYSLEELATIASEHTSKNTDTFVAVFSFLSGRLVHISEQAALILNRKKDVLA FT SSHFVDLLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQE FT KCHSPFRIIPYLIHVHHPAQPELESEPCCLTVVEKIHSGYEAPRIPVNKRIFTTTHTPG FT CVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPI FT RFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKVRT" FT CDS join(7844938..7845065,7845501..7845646,7846781..7846896, FT 7848105..7848306,7854017..7854068,7858585..7858733, FT 7861173..7861251,7863107..7863213,7863752..7863908, FT 7868953..7869058,7869953..7870081,7870498..7870648, FT 7879345..7879480,7880175..7880299,7880527..7880700, FT 7886540..7886770,7887178..7887875,7889894..7890221, FT 7895822..7896005,7897059..7897209,7902732..7902815) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-001" FT /standard_name="OTTHUMP00000001353" FT /product="period homolog 3 (Drosophila)" FT /note="match: proteins: Sw:O70361 Sw:P56645 Tr:O89119 FT Tr:Q8CBC2" FT /protein_id="CAI21435.1" FT /translation="MPRGEAPGPGRRGAKDEALGEESGERWSPEFHLQRKLADSSHSEQ FT QDRNRVSEELIMVVQEMKKYFPSERRNKPSTLDALNYALRCVHSVQANSEFFQILSQNG FT APQADVSMYSLEELATIASEHTSKNTDTFVAVFSFLSGRLVHISEQAALILNRKKDVLA FT SSHFVDLLAPQDMRVFYAHTARAQLPFWNNWTQRAAARYECAPVKPFFCRIRGGEDRKQ FT EKCHSPFRIIPYLIHVHHPAQPELESEPCCLTVVEKIHSGYEAPRIPVNKRIFTTTHTP FT GCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSP FT IRFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKVRTSPLNEDVFATKIKKMNDNDK FT DITELQEQIYKLLLQPVHVSVSSGYGSLGSSGSQEQLVSIASSSEASGHRVEETKAEQM FT TLQQVYASVNKIKNLGQQLYIESMTKSSFKPVTGTRTEPNGGGESANGGGECKTFTSFH FT QTLKNNSVYTEPCEDLRNDEHSPSYQQINCIDSVIRYLKSYNIPALKRKCISCTNTTSS FT SSEEDKQNHKADDVQALQAGLQIPAIPKSEMPTNGRSIDTGGGAPQILSTAMLSLGSGI FT SQCGYSSTIVHVPPPETARDATLFCEPWTLNMQPAPLTSEEFKHVGLTAAVLSAHTQKE FT EQNYVDKFREKILSSPYSSYLQQESRSKAKYSYFQGDSTSKQTRSAGCRKGKHKRKKLP FT EPPDSSSSNTGSGPRRGAHQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPL FT PAATSPGREYAAPGTAPEGLHGLPLSEGLQPYPAFPFPYLDTFMTVFLPDPPVCPLLSP FT SFLPCPFLGATASSAISPSMSSAMSPTLDPPPSVTSQRREEEKWEAQSEGHPFITSRSS FT SPLQLNLLQEEMPRPSESPDQMRRNTCPQTEYQCVTGNNGSESSPATTGALSTGSPPRE FT NPSHPTASALSTGSPPMKNPSHPTASALSTGSPPMKNPSHPTASTLSMGLPPSRTPSHP FT TATVLSTGSPPSESPSRTGSAASGSSDSSIYLTSSVYSSKISQNGQQSQDVQKKETFPN FT VAEEPIWRMIRQTPERILMTYQVPERVKEVVLKEDLEKLESMRQQQPQFSHGQKEELAK FT VYNWIQSQTVTQEIDIQACVTCENEDSADGAATSCGQVLVEDSC" FT CDS join(7844938..7845065,7845501..7845646,7846781..7846896, FT 7848105..7848306,7854020..7854068,7858585..7858733, FT 7861173..7861251,7863107..7863213,7863752..7863908, FT 7868953..7869058,7869953..7870081,7870498..7870627, FT 7879345..7879480,7880175..7880299,7880527..7880700, FT 7886540..7886770,7887178..7887875,7889897..7890221, FT 7895822..7896005,7897059..7897209,7902732..7902815) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-002" FT /standard_name="OTTHUMP00000001354" FT /product="period homolog 3 (Drosophila)" FT /protein_id="CAI21436.1" FT /translation="MPRGEAPGPGRRGAKDEALGEESGERWSPEFHLQRKLADSSHSEQ FT QDRNRVSEELIMVVQEMKKYFPSERRNKPSTLDALNYALRCVHSVQANSEFFQILSQNG FT APQADVSMYSLEELATIASEHTSKNTDTFVAVFSFLSGRLVHISEQAALILNRKKDVLA FT SSHFVDLLAPQDMRVFYAHTARAQLPFWNNWTQRAARYECAPVKPFFCRIRGGEDRKQE FT KCHSPFRIIPYLIHVHHPAQPELESEPCCLTVVEKIHSGYEAPRIPVNKRIFTTTHTPG FT CVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEHSPI FT RFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKVRTSPLNEDVFATKIKKMNDNDKD FT ITELQEQIYKLLLQPVHVSVSSGYGSLGSSGSQEQLVSIASSSEASGHRVEETKAEQMT FT LQQVYASVNKIKNLGQQLYIESMTKSSFKPVTGTRTEPNGGGECKTFTSFHQTLKNNSV FT YTEPCEDLRNDEHSPSYQQINCIDSVIRYLKSYNIPALKRKCISCTNTTSSSSEEDKQN FT HKADDVQALQAGLQIPAIPKSEMPTNGRSIDTGGGAPQILSTAMLSLGSGISQCGYSST FT IVHVPPPETARDATLFCEPWTLNMQPAPLTSEEFKHVGLTAAVLSAHTQKEEQNYVDKF FT REKILSSPYSSYLQQESRSKAKYSYFQGDSTSKQTRSAGCRKGKHKRKKLPEPPDSSSS FT NTGSGPRRGAHQNAQPCCPSAASSPHTSSPTFPPAAMVPSQAPYLVPAFPLPAATSPGR FT EYAAPGTAPEGLHGLPLSEGLQPYPAFPFPYLDTFMTVFLPDPPVCPLLSPSFLPCPFL FT GATASSAISPSMSSAMSPTLDPPPSVTSQRREEEKWEAQSEGHPFITSRSSSPLQLNLL FT QEEMPRPSESPDQMRRNTCPQTEYCVTGNNGSESSPATTGALSTGSPPRENPSHPTASA FT LSTGSPPMKNPSHPTASALSTGSPPMKNPSHPTASTLSMGLPPSRTPSHPTATVLSTGS FT PPSESPSRTGSAASGSSDSSIYLTSSVYSSKISQNGQQSQDVQKKETFPNVAEEPIWRM FT IRQTPERILMTYQVPERVKEVVLKEDLEKLESMRQQQPQFSHGQKEELAKVYNWIQSQT FT VTQEIDIQACVTCENEDSADGAATSCGQVLVEDSC" FT mRNA join(7845583..7845646,7846781..7846896,7847258..7847306, FT 7848105..7848398) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-005" FT /product="period homolog 3 (Drosophila)" FT /note="match: ESTs: Em:AI018784.1" FT mRNA join(7863111..7863213,7863752..7863908,7869953..7870407) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-006" FT /product="period homolog 3 (Drosophila)" FT /note="match: ESTs: Em:BU620023.1" FT polyA_signal 7864008..7864013 FT polyA_site 7864018 FT misc_feature 7875687..7875826 FT /note="Weak data" FT mRNA complement(join(7870302..7870776,7871549..7871664, FT 7887164..7887402)) FT /locus_tag="RP3-467L1.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI464920.1" FT mRNA join(7896868..7897209,7902732..7902944) FT /gene="PER3" FT /locus_tag="RP3-467L1.3-004" FT /product="period homolog 3 (Drosophila)" FT /note="match: ESTs: Em:AU279973.1" FT polyA_site complement(7903143) FT polyA_signal complement(7903165..7903170) FT polyA_signal 7905211..7905216 FT polyA_site 7905237 FT polyA_site complement(7907674) FT polyA_signal complement(7907690..7907695) FT CDS complement(join(7904003..7904010,7906752..7906826, FT 7907864..7907942,7909700..7909743,7910872..7910982, FT 7912961..7913063)) FT /gene="UTS2" FT /locus_tag="RP3-467L1.5-001" FT /standard_name="OTTHUMP00000001356" FT /product="urotensin 2" FT /note="match: proteins: Sw:O95399 Sw:Q8HYC2 Sw:Q95J46" FT /protein_id="CAI21437.1" FT /translation="MYKLASCCLLFIGFLNPLLSLPLLDSREISFQLSAPHEDARLTPE FT ELERASLLQILPEMLGAERGDILRKADSSTNIFNPRGNLRKFQDFSGQDPNILLSHLLA FT RIWKPYKKQRRKLRQDLRLWKKEPGLRIFKNYVWV" FT mRNA complement(join(7907682..7907942,7909700..7909743, FT 7910872..7910982,7912961..7913095)) FT /gene="UTS2" FT /locus_tag="RP3-467L1.5-002" FT /product="urotensin 2" FT /note="match: cDNAs: Em:AF104118.1" FT CDS complement(join(7907826..7907942,7909700..7909743, FT 7910872..7910982,7912961..7913063)) FT /gene="UTS2" FT /locus_tag="RP3-467L1.5-002" FT /standard_name="OTTHUMP00000001357" FT /product="urotensin 2" FT /protein_id="CAB63148.1" FT /translation="MYKLASCCLLFIGFLNPLLSLPLLDSREISFQLSAPHEDARLTPE FT ELERASLLQILPEMLGAERGDILRKADSSTNIFNPRGNLRKFQDFSGQDPNILLSHLLA FT RIWKPYKKRETPDCFWKYCV" FT mRNA complement(join(7903143..7904010,7906752..7906826, FT 7907864..7907942,7909700..7909743,7910872..7910982, FT 7912961..7913178,7913367..7913572)) FT /gene="UTS2" FT /locus_tag="RP3-467L1.5-001" FT /product="urotensin 2" FT /note="match: cDNAs: Em:BC025776.1" FT mRNA complement(join(7907826..7907942,7909700..7909743, FT 7910872..7910982,7912961..7912983,7913367..7913491)) FT /gene="UTS2" FT /locus_tag="RP3-467L1.5-003" FT /product="urotensin 2" FT /note="match: cDNAs: Em:AF140630.1" FT CDS complement(join(7907826..7907942,7909700..7909743, FT 7910872..7910982,7912961..7912983,7913367..7913491)) FT /gene="UTS2" FT /locus_tag="RP3-467L1.5-003" FT /standard_name="OTTHUMP00000001358" FT /product="urotensin 2" FT /protein_id="CAI21438.1" FT /translation="METNVFHLMLCVTSARTHKSTSLCFGHFNSYPSLPLIHDLLLEIS FT FQLSAPHEDARLTPEELERASLLQILPEMLGAERGDILRKADSSTNIFNPRGNLRKFQD FT FSGQDPNILLSHLLARIWKPYKKRETPDCFWKYCV" FT misc_feature 7923769 FT /note="Clone_left_end: RP5-892F13" FT misc_feature 7943568 FT /note="Clone_right_end: RP3-467L1" FT misc_feature 7945569..8011316 FT /note="annotated region of clone" FT misc_feature 7945803..7945901 FT /note="Weak data" FT misc_feature 7959839 FT /note="Clone_left_end: CTA-215D11" FT polyA_site complement(7979907) FT polyA_signal complement(7979921..7979926) FT polyA_site complement(7993187) FT mRNA complement(join(7981860..7982081,7993222..7993356, FT 7995073..7995160)) FT /gene="TNFRSF9" FT /locus_tag="RP5-892F13.1-003" FT /product="tumor necrosis factor receptor superfamily, FT member 9" FT /note="match: ESTs: Em:BF064069.1" FT mRNA complement(join(7993187..7993356,7995073..7995203, FT 7996520..7996623,7997750..7997816,7998253..7998364)) FT /gene="TNFRSF9" FT /locus_tag="RP5-892F13.1-002" FT /product="tumor necrosis factor receptor superfamily, FT member 9" FT /note="match: ESTs: Em:BG058770.1 Em:CA308737.1" FT CDS complement(join(7980895..7980983,7993222..7993356, FT 7995073..7995203,7997750..7997816,7998253..7998390, FT 7998781..7998888,7999955..8000054)) FT /gene="TNFRSF9" FT /locus_tag="RP5-892F13.1-001" FT /standard_name="OTTHUMP00000001360" FT /product="tumor necrosis factor receptor superfamily, FT member 9" FT /note="match: proteins: Sw:Q07011" FT /protein_id="CAB57398.1" FT /translation="MGNSCYNIVATLLLVLNFERTRSLQDPCSNCPAGTFCDNNRNQIC FT SPCPPNSFSSAGGQRTCDICRQCKGVFRTRKECSSTSNAECDCTPGFHCLGAGCSMCEQ FT DCKQGQELTKKGCKDCCFGTFNDQKRGICRPWTNCSLDGKSVLVNGTKERDVVCGPSPA FT DLSPGASSVTPPAPAREPGHSPQIISFFLALTSTALLFLLFFLTLRFSVVKRGRKKLLY FT IFKQPFMRPVQTTQEEDGCSCRFPEEEEGGCEL" FT mRNA complement(join(7979907..7980983,7993222..7993356, FT 7995073..7995203,7997750..7997816,7998253..7998390, FT 7998781..7998888,7999955..8000138,8000844..8000926)) FT /gene="TNFRSF9" FT /locus_tag="RP5-892F13.1-001" FT /product="tumor necrosis factor receptor superfamily, FT member 9" FT /note="match: cDNAs: Em:BC006196.1 Em:BC006196.2 FT Em:L12964.2 Em:U03397.1" FT misc_feature 8011216 FT /note="Clone_right_end: RP5-892F13" FT misc_feature 8011317..8133495 FT /note="annotated region of clone" FT unsure 8013001 FT /note="weak data" FT unsure 8013050 FT /note="weak data" FT mRNA join(8014351..8014383,8022823..8022935,8025384..8025485, FT 8029405..8029464,8030954..8031023,8037712..8037798, FT 8044954..8045112) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-004" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:CB294100.1" FT mRNA join(8021723..8021795,8022823..8022935,8025384..8025485, FT 8029145..8029208,8029405..8029464,8030954..8031108) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-007" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:AL597221.1" FT mRNA join(8021723..8021853,8022823..8022935,8025384..8025485, FT 8029405..8029464,8030954..8031023,8037712..8037798, FT 8044954..8045339) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-002" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:BU603047.1" FT /note="match: cDNAs: Em:BC008188.1" FT mRNA join(8021752..8021795,8022823..8022935,8025384..8025485, FT 8029405..8029464,8030954..8031023,8037712..8037798, FT 8044954..8045565) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-001" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:BU682926.1" FT /note="match: cDNAs: Em:AF021819.1" FT mRNA join(8021761..8021795,8022823..8022935,8025384..8025485, FT 8030954..8031023,8037712..8037798,8044954..8045341) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-003" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: cDNAs: Em:AK130886.1" FT mRNA join(8021808..8021853,8022823..8022935,8025384..8025485, FT 8029405..8029464,8030954..8031581) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-008" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:BX444623.1" FT mRNA join(8021954..8022141,8022823..8022935,8025384..8025485, FT 8029405..8029464,8030954..8031023,8037712..8037798, FT 8044954..8045310) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-005" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:BG716033.1 Em:BG771654.1 FT Em:BI827423.1 Em:BQ435677.1" FT mRNA join(8022029..8022161,8022823..8022935,8025384..8025485, FT 8029405..8029464,8030954..8031023,8037712..8037798, FT 8044954..8045171) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-006" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:BI830621.1" FT mRNA join(8022827..8022935,8025384..8025485,8029405..8029464, FT 8030954..8031023,8031689..8032017) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-009" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:BG029568.1" FT CDS join(8022846..8022935,8025384..8025485,8029405..8029464, FT 8030954..8031023,8037712..8037798,8044954..8045114) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-001" FT /standard_name="OTTHUMP00000001348" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: proteins: Sw:Q99LX0 Tr:Q8UW59 Tr:Q90XE4" FT /protein_id="CAB52550.1" FT /translation="MASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQ FT CSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAA FT ICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFE FT FALAIVEALNGKEVAAQVKAPLVLKD" FT mRNA join(8025411..8025485,8029405..8029464,8030954..8031023, FT 8037712..8037798,8044924..8045342) FT /gene="PARK7" FT /locus_tag="CTA-215D11.1-010" FT /product="Parkinson disease (autosomal recessive, early FT onset) 7" FT /note="match: ESTs: Em:BU688129.1" FT polyA_signal 8045318..8045323 FT polyA_site 8045339 FT polyA_site 8045565 FT mRNA complement(join(8066074..8066271,8066573..8066784)) FT /locus_tag="CTA-215D11.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI005454.1" FT polyA_site complement(8071779) FT polyA_signal complement(8071807..8071812) FT CDS complement(join(8073270..8074456,8075368..8075444, FT 8075555..8075679)) FT /gene="ERRFI1" FT /locus_tag="CTA-215D11.2-001" FT /standard_name="OTTHUMP00000001359" FT /product="ERBB receptor feedback inhibitor 1" FT /note="match: proteins: Sw:P05432 Sw:Q99JZ7 Sw:Q9UJM3" FT /protein_id="CAB52551.1" FT /translation="MSIAGVAAQEIRVPLKTGFLHNGRAMGNMRKTYWSSRSEFKNNFL FT NIDPITMAYSLNSSAQERLIPLGHASKSAPMNGHCFAENGPSQKSSLPPLLIPPSENLG FT PHEEDQVVCGFKKLTVNGVCASTPPLTPIKNSPSLFPCAPLCERGSRPLPPLPISEALS FT LDDTDCEVEFLTSSDTDFLLEDSTLSDFKYDVPGRRSFRGCGQINYAYFDTPAVSAADL FT SYVSDQNGGVPDPNPPPPQTHRRLRRSHSGPAGSFNKPAIRISNCCIHRASPNSDEDKP FT EVPPRVPIPPRPVKPDYRRWSAEVTSSTYSDEDRPPKVPPREPLSPSNSRTPSPKSLPS FT YLNGVMPPTQSFAPDPKYVSSKALQRQNSEGSASKVPCILPIIENGKKVSSTHYYLLPE FT RPPYLDKYEKFFREAEETNGGAQIQPLPADCGISSATEKPDSKTKMDLGGHVKRKHLSY FT VVSP" FT mRNA complement(join(8073487..8075444,8075555..8075693)) FT /gene="ERRFI1" FT /locus_tag="CTA-215D11.2-002" FT /product="ERBB receptor feedback inhibitor 1" FT /note="match: cDNAs: Em:BC012839.1" FT mRNA complement(join(8064464..8064618,8075555..8075752, FT 8086218..8086343)) FT /gene="ERRFI1" FT /locus_tag="CTA-215D11.2-003" FT /product="ERBB receptor feedback inhibitor 1" FT /note="match: ESTs: Em:BM509000.1" FT mRNA complement(join(8071779..8074456,8075368..8075444, FT 8075555..8075752,8086218..8086368)) FT /gene="ERRFI1" FT /locus_tag="CTA-215D11.2-001" FT /product="ERBB receptor feedback inhibitor 1" FT /note="match: cDNAs: Em:AK096149.1 Em:BC025337.1" FT mRNA complement(join(8073799..8074456,8075555..8075752, FT 8086218..8086356)) FT /gene="ERRFI1" FT /locus_tag="CTA-215D11.2-004" FT /product="ERBB receptor feedback inhibitor 1" FT /note="match: ESTs: Em:BX335630.1" FT mRNA complement(join(8074100..8074456,8075368..8075460, FT 8075555..8075752,8086218..8086356)) FT /gene="ERRFI1" FT /locus_tag="CTA-215D11.2-005" FT /product="ERBB receptor feedback inhibitor 1" FT /note="match: ESTs: Em:BI818234.1" FT mRNA join(8086798..8087481,8089287..8089417, FT AL358876.11:6494..7722) FT /locus_tag="RP11-431K24.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK130268.1" FT CDS complement(join(8117305..8118001,8118421..8118523)) FT /pseudo FT /locus_tag="CTA-215D11.4-001" FT /product="ribosomal protein L7a (RPL7A) pseudogene" FT /note="match: proteins: Sw:O57592 Sw:O76732 Sw:P12970 FT Sw:P62425 Sw:Q90YW2 Tr:Q7TQ86 Tr:Q80UT7 Tr:Q86LY4 Tr:Q8CDE3 FT Tr:Q8ITA4 Tr:Q8MKB9" FT misc_feature 8133395 FT /note="Clone_right_end: CTA-215D11" FT misc_feature 8133496..8177039 FT /note="annotated region of clone" FT misc_feature 8173040 FT /note="Clone_left_end: RP11-431K24" FT misc_feature 8177040..8346223 FT /note="annotated region of clone" FT misc_feature 8209686 FT /note="Clone_right_end: RP11-478I22" FT misc_feature 8226973..8227009 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS join(8249884..8250391,8251276..8251555,8252242..8252314, FT 8252617..8252830) FT /pseudo FT /locus_tag="RP11-431K24.2-001" FT /product="52kDa eukaryotic translation initiation factor 2 FT subunit 3 gamma (EIF2S3) pseudogene" FT /note="match: proteins: Sw:P41091 Sw:Q9Z0N1 Sw:Q9Z0N2 FT Tr:Q7ZY57 Tr:Q9CRE9 Tr:Q9D791" FT mRNA join(AL034417.14:75582..76265,AL034417.14:78071..78201, FT 8181534..8182762) FT /locus_tag="RP11-431K24.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK130268.1" FT mRNA join(8268732..8268933,8270547..8270655,8274685..8274738, FT 8275139..8275270) FT /locus_tag="RP11-431K24.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ011841.1" FT polyA_signal 8275231..8275236 FT polyA_site 8275270 FT polyA_site complement(8278250) FT polyA_signal complement(8278266..8278271) FT mRNA complement(join(8278250..8278593,8280457..8280589)) FT /locus_tag="RP11-431K24.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG215422.1" FT misc_feature 8334938 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 850bp by restriction digest data" FT misc_feature 8342225 FT /note="Clone_left_end: RP11-141M15" FT misc_feature 8346224..8466555 FT /note="annotated region of clone" FT misc_feature 8354987 FT /note="Clone_right_end: RP11-431K24" FT mRNA complement(join(8425915..8426034,AL096855.48:18232..18312, FT AL096855.48:18672..18924)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-005" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:CA842580.1" FT mRNA complement(join(8414153..8415180,8415479..8415659, FT 8416160..8416306,8418256..8418976,8419824..8420046, FT 8420172..8421550,8421823..8421936,8422743..8422904, FT 8424116..8424315,8424806..8424898,8425872..8426034, FT AL096855.48:18232..18312,AL096855.48:19066..19171)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-003" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AF016005.1" FT mRNA complement(join(8425936..8426034,AL096855.48:18232..18312, FT AL096855.48:18672..18752,AL096855.48:19066..19171)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-006" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:AA613558.1" FT mRNA complement(join(8425940..8426034,AL096855.48:18232..18312, FT AL096855.48:19520..19739)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-004" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:AW503134.1" FT mRNA complement(join(8424116..8424315,8424806..8424898, FT 8425872..8426034,AL096855.48:18232..18312, FT AL096855.48:20293..20717)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-013" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:BM554449.1" FT mRNA join(8377886..8378246,8384366..8384786,8385358..8385450, FT 8385878..8386102,8390269..8390996,8395497..8395650, FT 8397876..8398052,8399553..8399758,8403807..8404225) FT /gene="SLC45A1" FT /locus_tag="RP11-141M15.1-001" FT /product="solute carrier family 45, member 1" FT /note="match: cDNAs: Em:AB075229.1 Em:AK082651.1 FT Em:BC051188.1" FT /note="match: ESTs: Em:BM543646.1" FT CDS join(8378169..8378246,8384366..8384786,8385358..8385450, FT 8385878..8386102,8390269..8390996,8395497..8395650, FT 8397876..8398052,8399553..8399758,8403807..8404073) FT /gene="SLC45A1" FT /locus_tag="RP11-141M15.1-001" FT /standard_name="OTTHUMP00000000552" FT /product="solute carrier family 45, member 1" FT /note="match: proteins: Sw:Q9Y2W3.3" FT /protein_id="CAH70515.2" FT /translation="MLQQPGPRPGRQQPSGDRDACRLHPQGRPPALPTMIPAASSTPPG FT DALFPSVAPQDFWRSQVTGYSGSVTRHLSHRANNFKRHPKRRKCIRPSPPPPPNTPCPL FT ELVDFGDLHPQRSFRELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFIS FT PILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGIALADVTGN FT HKWGLLLTVCGVVLMDFSADSADNPSHAYMMDVCSPADQDRGLNIHALLAGLGGGFGYV FT VGGIHWDKTGFGRALGGQLRVIYLFTAVTLSVTTVLTLVSIPERPLRPPSEKRAAMKSP FT SLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISPPSPLTPKYGSFISRDSSLTGISEFA FT SSFGTANIDSVLIDCFTGGHDSYLAIPGSVPRPPISVSFPRAPDGFYRQDRGLLEGREG FT ALTSGCDGDILRVGSLDTSKPRSSGILKRPQTLAIPDAAGGGGPETSRRRNVTFSQQVA FT NILLNGVKYESELTGSSERAEQPLSVGRLCSTICNMPKALRTLCVNHFLGWLSFEGMLL FT FYTDFMGEVVFQGDPKAPHTSEAYQKYNSGVTMGCWGMCIYAFSAAFYSAILEKLEEFL FT SVRTLYFIAYLAFGLGTGLATLSRNLYVVLSLCITYGILFSTLCTLPYSLLCDYYQSKK FT FAGSSADGTRRGMGVDISLLSCQYFLAQILVSLVLGPLTSAVGSANGVMYFSSLVSFLG FT CLYSSLFVIYEIPPSDAADEEHRPLLLNV" FT misc_feature 8380265..8380315 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 8380316 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 600bp by restriction digest data" FT misc_feature 8389508 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 200bp by restriction digest data" FT mRNA join(8390198..8390996,8395497..8395650,8397876..8398052, FT 8399553..8399758,8403807..8404217) FT /gene="SLC45A1" FT /locus_tag="RP11-141M15.1-002" FT /product="solute carrier family 45, member 1" FT /note="match: cDNAs: Em:AF118274.1" FT mRNA join(8390488..8390996,8395497..8395650,8396139..8396169) FT /gene="SLC45A1" FT /locus_tag="RP11-141M15.1-005" FT /product="solute carrier family 45, member 1" FT /note="match: ESTs: Em:BE858821.1" FT mRNA join(8390898..8390996,8395497..8395674,8397876..8397914, FT 8403891..8404219) FT /gene="SLC45A1" FT /locus_tag="RP11-141M15.1-004" FT /product="solute carrier family 45, member 1" FT /note="match: ESTs: Em:BF062396.1" FT misc_feature 8402956 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 200bp by restriction digest data" FT polyA_signal 8404204..8404209 FT polyA_site 8404225 FT polyA_site complement(8412457) FT polyA_signal complement(8412481..8412486) FT mRNA complement(join(8412969..8413238,8415003..8415142)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-011" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:AA213395.1" FT CDS complement(join(8415147..8415180,8415479..8415659, FT 8416160..8416306,8418256..8418976,8419824..8420046, FT 8420172..8421550,8421823..8421936,8422743..8422904, FT 8424116..8424315,8424806..8424898,8425872..8426034, FT AL096855.48:18232..18312,AL096855.48:61430..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:136718..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT AL357713.11:31762..31887,AL357713.11:41511..41581, FT AL357713.11:73174..73498)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-001" FT /standard_name="OTTHUMP00000001701" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: proteins: Sw:Q9P2R6" FT /protein_id="CAH70516.1" FT /translation="MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEG FT GAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVV FT YRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVASQPPQ FT HLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVI FT KNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNS FT TQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAF FT AGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTED FT EVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAV FT FRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKD FT WHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGLSGKHSMRTRR FT SRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKK FT VKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVN FT DEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSS FT APPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP FT SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQP FT FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP FT PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQ FT LMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT FT PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP FT PPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEA FT IEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGP FT GHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFYMPLNPTDPL FT LAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPGFEVKPPELDPLHPAANP FT MEHFARHSALTIPPTAGPHPFASFHPGLNPLERERLALAGPQLRPEMSYPDRLAAERIH FT AERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTA FT GPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQAM FT HAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL" FT misc_feature 8418454..8418489 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT polyA_site complement(8423770) FT mRNA complement(join(8423770..8424315,8424806..8424898)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-012" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:BE646375.1" FT misc_feature 8462557 FT /note="Clone_left_end: RP5-1115A15" FT mRNA complement(join(8412466..8415180,8415479..8415659, FT 8416160..8416306,8418256..8418976,8419824..8420046, FT 8420172..8421550,8421823..8421936,8422743..8422904, FT 8424116..8424315,8424806..8424898,8425872..8426034, FT AL096855.48:18232..18312,AL096855.48:61430..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:121263..121443)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-002" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AB007927.1" FT CDS complement(join(8415147..8415180,8415479..8415659, FT 8416160..8416306,8418256..8418976,8419824..8420046, FT 8420172..8421550,8421823..8421936,8422743..8422904, FT 8424116..8424315,8424806..8424898,8425872..8426034, FT AL096855.48:18232..18312,AL096855.48:61430..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:121263..121288)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-002" FT /standard_name="OTTHUMP00000001702" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: proteins: Sw:Q9P2R6" FT /protein_id="CAH70517.1" FT /translation="MDDPFSPCRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQH FT EELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHES FT GYDAGKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGEL FT ITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASE FT DDFDSEDSEQELKGYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPV FT DPPPFMFKPVKEEDDGLSGKHSMRTRRSRGSMSTLRSGRKKQPASPDGRTSPINEDIRS FT SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK FT KTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSD FT SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAP FT NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQP FT PLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS FT QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN FT LPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHP FT PTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSI FT AGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDR FT GYNSCARTDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERER FT EREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLS FT EYARPHVMSPTNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRE FT RELRERMKPGFEVKPPELDPLHPAANPMEHFARHSALTIPPTAGPHPFASFHPGLNPLE FT RERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHS FT HLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHP FT VFGTPYPRDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQE FT DYYSRLKKEGDKQL" FT mRNA complement(join(8412457..8415180,8415479..8415659, FT 8416160..8416306,8418256..8418976,8419824..8420046, FT 8420172..8421550,8421823..8421936,8422743..8422904, FT 8424116..8424315,8424806..8424898,8425872..8426034, FT AL096855.48:18232..18312,AL096855.48:61430..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:136718..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT AL357713.11:31762..31887,AL357713.11:41511..41581, FT AL357713.11:73174..73642,AL357552.25:106192..106376, FT AL357552.25:130948..131253)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-001" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AB036737.1" FT misc_feature 8466556..8642958 FT /note="annotated region of clone" FT mRNA complement(join(8601283..8601377,8616534..8616630, FT 8617477..8617582,AL357713.11:7986..8042)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-008" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:BF947436.1" FT misc_feature 8481855..8481871 FT /note="Sequence confirmed by AC016049 sequenced by WIBR" FT mRNA complement(join(AL356072.21:81691..81810,8482787..8482867, FT 8483227..8483479)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-005" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:CA842580.1" FT mRNA complement(join(AL356072.21:69929..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT 8482787..8482867,8483621..8483726)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-003" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AF016005.1" FT mRNA complement(join(AL356072.21:81712..81810,8482787..8482867, FT 8483227..8483307,8483621..8483726)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-006" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:AA613558.1" FT mRNA complement(join(AL356072.21:81716..81810,8482787..8482867, FT 8484075..8484294)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-004" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:AW503134.1" FT mRNA join(8484705..8484761,8488542..8488648,8489887..8490032, FT 8494693..8494898) FT /locus_tag="RP5-1115A15.1-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BX114148.1" FT mRNA complement(join(AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT 8482787..8482867,8484848..8485272)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-013" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:BM554449.1" FT mRNA join(8485698..8485814,8488542..8488648,8489887..8490101) FT /locus_tag="RP5-1115A15.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA382221.1 Em:AW663507.1" FT polyA_signal 8490082..8490087 FT polyA_site 8490101 FT misc_feature 8522744 FT /note="Clone_right_end: RP11-141M15" FT mRNA complement(join(8525030..8526083,8555123..8555222, FT 8557465..8557589,8568686..8568734,8601273..8601377, FT 8616534..8616630,8617477..8617582,AL357713.11:31762..31887, FT AL357713.11:41511..41581,AL357713.11:73174..73642, FT AL357552.25:67219..67626)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-010" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AK096094.1" FT CDS complement(join(AL356072.21:70923..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT 8482787..8482867,8525985..8526083,8555123..8555222, FT 8557465..8557589,8568686..8568734,8601273..8601377, FT 8616534..8616630,8617477..8617582,AL357713.11:31762..31887, FT AL357713.11:41511..41581,AL357713.11:73174..73498)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-001" FT /standard_name="OTTHUMP00000001701" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: proteins: Sw:Q9P2R6" FT /protein_id="CAI19208.1" FT /translation="MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEG FT GAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVV FT YRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVASQPPQ FT HLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVI FT KNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNS FT TQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAF FT AGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTED FT EVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAV FT FRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKD FT WHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGLSGKHSMRTRR FT SRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKK FT VKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVN FT DEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSS FT APPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP FT SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQP FT FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP FT PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQ FT LMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT FT PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP FT PPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEA FT IEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGP FT GHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFYMPLNPTDPL FT LAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPGFEVKPPELDPLHPAANP FT MEHFARHSALTIPPTAGPHPFASFHPGLNPLERERLALAGPQLRPEMSYPDRLAAERIH FT AERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTA FT GPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQAM FT HAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL" FT misc_feature 8559097..8560195 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT misc_feature 8560196 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 420bp by restriction digest data" FT misc_feature 8582429 FT /note="Clone_left_end: RP11-3J23" FT mRNA complement(join(8482850..8482867,8525985..8526083, FT 8555123..8555222,8557465..8557589,8568686..8568734, FT 8579769..8579851,8585818..8586086)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-007" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:BI916181.1" FT mRNA complement(join(AL356072.21:68242..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT 8482787..8482867,8525985..8526083,8555123..8555222, FT 8557465..8557589,8568686..8568734,8585818..8585998)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-002" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AB007927.1" FT CDS complement(join(AL356072.21:70923..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT 8482787..8482867,8525985..8526083,8555123..8555222, FT 8557465..8557589,8568686..8568734,8585818..8585843)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-002" FT /standard_name="OTTHUMP00000001702" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: proteins: Sw:Q9P2R6" FT /protein_id="CAI19209.1" FT /translation="MDDPFSPCRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQH FT EELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHES FT GYDAGKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGEL FT ITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASE FT DDFDSEDSEQELKGYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPV FT DPPPFMFKPVKEEDDGLSGKHSMRTRRSRGSMSTLRSGRKKQPASPDGRTSPINEDIRS FT SGRNSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSK FT KTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSD FT SSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAP FT NQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQP FT PLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPAS FT QSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNAN FT LPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHP FT PTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSI FT AGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDR FT GYNSCARTDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKERERERER FT EREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLS FT EYARPHVMSPTNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRE FT RELRERMKPGFEVKPPELDPLHPAANPMEHFARHSALTIPPTAGPHPFASFHPGLNPLE FT RERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHS FT HLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHP FT VFGTPYPRDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQE FT DYYSRLKKEGDKQL" FT mRNA complement(join(AL356072.21:68233..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT 8482787..8482867,8525985..8526083,8555123..8555222, FT 8557465..8557589,8568686..8568734,8601273..8601377, FT 8616534..8616630,8617477..8617582,AL357713.11:31762..31887, FT AL357713.11:41511..41581,AL357713.11:73174..73642, FT AL357552.25:106192..106376,AL357552.25:130948..131253)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-001" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AB036737.1" FT misc_feature 8640958 FT /note="Clone_right_end: RP5-1115A15" FT misc_feature 8642959..8746371 FT /note="annotated region of clone" FT mRNA complement(join(AL096855.48:136728..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT 8650844..8650900)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-008" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:BF947436.1" FT mRNA complement(join(8716252..8716500,AL357552.25:16843..17007)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-009" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:AI524637.1 Em:AW444820.1 FT Em:BE675021.1 Em:BF512881.1" FT mRNA complement(join(AL096855.48:60475..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:136718..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT 8674620..8674745,8684369..8684439,8716032..8716500, FT AL357552.25:67219..67626)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-010" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AK096094.1" FT CDS complement(join(AL356072.21:70923..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT AL096855.48:18232..18312,AL096855.48:61430..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:136718..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT 8674620..8674745,8684369..8684439,8716032..8716356)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-001" FT /standard_name="OTTHUMP00000001701" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: proteins: Sw:Q9P2R6" FT /protein_id="CAH73433.1" FT /translation="MTADKDKDKDKEKDRDRDRDREREKRDKARESENSRPRRSCTLEG FT GAKNYAESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITEDDVV FT YRPGDCVYIESRRPNTPYFICSIQDFKLVHNSQACCRSPTPALCDPPACSLPVASQPPQ FT HLSEAGRGPVGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVI FT KNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNS FT TQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAF FT AGMCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIEKCWTED FT EVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAV FT FRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKD FT WHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGLSGKHSMRTRR FT SRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKKSAKK FT VKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVN FT DEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSS FT APPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP FT SPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQP FT FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP FT PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQ FT LMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPIT FT PPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESP FT PPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEA FT IEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGP FT GHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFYMPLNPTDPL FT LAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPGFEVKPPELDPLHPAANP FT MEHFARHSALTIPPTAGPHPFASFHPGLNPLERERLALAGPQLRPEMSYPDRLAAERIH FT AERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTA FT GPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQAM FT HAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL" FT misc_feature 8746172 FT /note="Clone_left_end: RP4-633I8" FT mRNA complement(join(AL356072.21:68233..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT AL096855.48:18232..18312,AL096855.48:61430..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:136718..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT 8674620..8674745,8684369..8684439,8716032..8716500, FT AL357552.25:106192..106376,AL357552.25:130948..131253)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-001" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AB036737.1" FT misc_feature 8746372..8890240 FT /note="annotated region of clone" FT misc_feature 8754515 FT /note="Clone_right_end: RP11-3J23" FT mRNA complement(join(AL357713.11:73394..73642,8763114..8763278)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-009" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: ESTs: Em:AI524637.1 Em:AW444820.1 FT Em:BE675021.1 Em:BF512881.1" FT CDS 8810489..8811146 FT /pseudo FT /locus_tag="RP4-633I8.1-001" FT /product="ribosomal protein L7 (RPL7) pseudogene" FT /note="match: proteins: Sw:P05426 Sw:P14148 Sw:P18124 FT Tr:O95036 Tr:Q15289 Tr:Q5M9N8 Tr:Q90YW3 Tr:Q9DG69" FT mRNA complement(join(AL096855.48:60475..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:136718..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT AL357713.11:31762..31887,AL357713.11:41511..41581, FT AL357713.11:73174..73642,8813490..8813897)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-010" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AK096094.1" FT misc_feature 8834000..8834087 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 8840799 FT /note="Clone_left_end: RP11-185B14" FT misc_feature 8842904..8842905 FT /note="Sequence from overlapping clone RP11-185B14 FT (AL354930). Assembly confirmed by restriction digest" FT CDS complement(8846262..8846994) FT /pseudo FT /locus_tag="RP4-633I8.2-001" FT /product="ribosomal protein L7 (RPL7) pseudogene" FT /note="match: proteins: Sw:P05426 Sw:P14148 Sw:P18124 FT Tr:Q5M9N8 Tr:Q7X7V6 Tr:Q9SCF9" FT CDS join(8858534..8858750,8859368..8859565) FT /pseudo FT /locus_tag="RP4-633I8.3-001" FT /product="ribosomal protein L27 (RPL27) pseudogene" FT /note="match: proteins: Sw:P61355 Sw:Q90YU1 Tr:P61358 FT Tr:Q8WTY3 Tr:Q9DFL2" FT misc_feature 8861709..8861725 FT /note="Sequence from overlapping clone RP11-185B14 FT (AL354930). Assembly confirmed by restriction digest" FT mRNA join(8865919..8865997,8866837..8867110) FT /locus_tag="RP4-633I8.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ632317.1" FT misc_feature 8870279..8870305 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(AL356072.21:68233..70956, FT AL356072.21:71255..71435,AL356072.21:71936..72082, FT AL356072.21:74032..74752,AL356072.21:75600..75822, FT AL356072.21:75948..77326,AL356072.21:77599..77712, FT AL356072.21:78519..78680,AL356072.21:79892..80091, FT AL356072.21:80582..80674,AL356072.21:81648..81810, FT AL096855.48:18232..18312,AL096855.48:61430..61528, FT AL096855.48:90568..90667,AL096855.48:92910..93034, FT AL096855.48:104131..104179,AL096855.48:136718..136822, FT AL096855.48:151979..152075,AL096855.48:152922..153027, FT AL357713.11:31762..31887,AL357713.11:41511..41581, FT AL357713.11:73174..73642,8852463..8852647, FT 8877219..8877524)) FT /gene="RERE" FT /locus_tag="RP11-141M15.2-001" FT /product="arginine-glutamic acid dipeptide (RE) repeats" FT /note="match: cDNAs: Em:AB036737.1" FT misc_feature 8877521..8877676 FT /note="Sequence from overlapping clone RP11-185B14 FT (AL354930). Assembly confirmed by restriction digest" FT misc_feature 8877830..8878498 FT /note="Sequence from overlapping clone RP11-185B14 FT (AL354930). Assembly confirmed by restriction digest" FT misc_feature 8890140 FT /note="Clone_right_end: RP4-633I8" FT misc_feature 8890241..8916640 FT /note="annotated region of clone" FT CDS 8891173..8891431 FT /pseudo FT /locus_tag="RP11-185B14.1-001" FT /product="pseudogene similar to part of ribosomal protein FT L23a (RPL23A)" FT /note="match: proteins: Sw:O22644 Sw:P62751 Sw:P62752 FT Sw:Q07761 Sw:Q9AT35 Tr:Q8ISQ4 Tr:Q8ITB8 Tr:Q91YK6 Tr:Q9DFF6 FT Tr:Q9LWB2 Tr:Q9LWB3" FT misc_feature 8912641 FT /note="Clone_left_end: RP3-477M7" FT misc_feature 8916641..9056068 FT /note="annotated region of clone" FT polyA_site complement(8921061) FT polyA_site complement(8921064) FT polyA_signal complement(8921083..8921088) FT mRNA complement(join(8921064..8921488,8922946..8923004, FT 8923294..8923402,8923950..8924151,8925344..8925541, FT 8926338..8926560,8927176..8927309,8928047..8928116, FT 8930511..8931356)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-002" FT /product="enolase 1, (alpha)" FT /note="match: cDNAs: Em:AL833741.1" FT CDS complement(join(8921419..8921488,8922946..8923004, FT 8923294..8923402,8923950..8924151,8925344..8925541, FT 8926338..8926560,8927176..8927309,8928047..8928116, FT 8930511..8930569,8931950..8932045,8934883..8934967)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-001" FT /standard_name="OTTHUMP00000001706" FT /product="enolase 1, (alpha)" FT /note="match: proteins: Sw:O57391 Sw:P07323 Sw:P51913 FT Sw:Q9W7L1 Tr:Q9DDH1" FT /protein_id="CAC42425.1" FT /translation="MSILKIHAREIFDSRGNPTVEVDLFTSKGLFRAAVPSGASTGIYE FT ALELRDNDKTRYMGKGVSKAVEHINKTIAPALVSKKLNVTEQEKIDKLMIEMDGTENKS FT KFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNSEVILPVPAFNVINGGSHAGNKL FT AMQEFMILPVGAANFREAMRIGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKE FT GLELLKTAIGKAGYTDKVVIGMDVAASEFFRSGKYDLDFKSPDDPSRYISPDQLADLYK FT SFIKDYPVVSIEDPFDQDDWGAWQKFTASAGIQVVGDDLTVTNPKRIAKAVNEKSCNCL FT LLKVNQIGSVTESLQACKLAQANGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPC FT RSERLAKYNQLLRIEEELGSKAKFAGRNFRNPLAK" FT mRNA complement(join(8931150..8931249,8931411..8932045, FT 8934883..8934976)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-007" FT /product="enolase 1, (alpha)" FT mRNA complement(join(8935847..8936090,8937567..8938066)) FT /locus_tag="RP3-477M7.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG419400.1" FT mRNA complement(join(8926420..8926560,8927176..8927309, FT 8928047..8928116,8930511..8930569,8931950..8932045, FT 8934883..8934976,8938274..8938326)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-004" FT /product="enolase 1, (alpha)" FT /note="match: ESTs: Em:BE276267.1 Em:BE905826.1" FT mRNA complement(join(8921061..8921488,8922946..8923004, FT 8923294..8923402,8923950..8924151,8925344..8925541, FT 8926338..8926560,8927176..8927309,8928047..8928116, FT 8930511..8930569,8931950..8932045,8934883..8934976, FT 8938639..8938749)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-001" FT /product="enolase 1, (alpha)" FT /note="match: cDNAs: Em:AK019820.1 Em:BC004458.1 FT Em:BC009912.1 Em:BC009912.2 Em:BC015641.1" FT mRNA complement(join(8926409..8926560,8927176..8927309, FT 8928047..8928116,8928500..8928638,8930548..8930569, FT 8931950..8932045,8934883..8934976,8938639..8938729)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-003" FT /product="enolase 1, (alpha)" FT /note="match: ESTs: Em:BF204991.1" FT mRNA complement(join(8930231..8930467,8931950..8932045, FT 8934883..8934976,8938639..8938747)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-005" FT /product="enolase 1, (alpha)" FT /note="match: ESTs: Em:BM827683.1" FT mRNA complement(join(8931411..8932045,8934883..8934976, FT 8938639..8938735)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-006" FT /product="enolase 1, (alpha)" FT /note="match: ESTs: Em:CD655269.1" FT mRNA complement(join(8934915..8934976,8938639..8939308)) FT /gene="ENO1" FT /locus_tag="RP3-477M7.1-008" FT /product="enolase 1, (alpha)" FT /note="match: ESTs: Em:BI559375.1" FT mRNA join(8938894..8939019,8939624..8939953) FT /locus_tag="RP3-477M7.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA454066.1 Em:AI313313.1 FT Em:BU566406.1 Em:BU588425.1" FT polyA_signal 8939910..8939915 FT polyA_site 8939932 FT CDS 8953468..8954210 FT /pseudo FT /locus_tag="RP3-477M7.4-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:P05204 Sw:Q86SG4" FT misc_feature 8954793..8955310 FT /note="Sequence from overlapping clone bA185B14 (AL354930). FT Assembly confirmed by restriction digest" FT CDS complement(8967506..8967803) FT /pseudo FT /locus_tag="RP3-477M7.5-001" FT /product="pseudogene similar to part of a Zinc finger FT protein" FT /note="match: proteins: Sw:P15620 Sw:Q14591 Sw:Q96LW9 FT Tr:Q96CX4 Tr:Q9H5H4" FT CDS 8969819..8969965 FT /pseudo FT /locus_tag="RP3-477M7.6-001" FT /product="pseudogene similar to part of cytochrome oxidase FT subunit II" FT /note="match: proteins: Sw:Q96127 Tr:Q85D17 Tr:Q85QF7 FT Tr:Q9MGC5" FT mRNA join(9005927..9006024,9009322..9009501,9017196..9017304, FT 9027831..9027875,9030926..9031037) FT /gene="CA6" FT /locus_tag="RP3-477M7.7-004" FT /product="carbonic anhydrase VI" FT /note="match: ESTs: Em:CB955924.1" FT mRNA join(9005927..9006024,9018969..9019061,9022646..9022715, FT 9027718..9027875,9030926..9031040,9034681..9034933) FT /gene="CA6" FT /locus_tag="RP3-477M7.7-003" FT /product="carbonic anhydrase VI" FT /note="match: ESTs: Em:CB956732.1" FT mRNA join(9005941..9006024,9009322..9009501,9011482..9012141, FT 9012460..9012710) FT /gene="CA6" FT /locus_tag="RP3-477M7.7-002" FT /product="carbonic anhydrase VI" FT /note="match: cDNAs: Em:BC034350.1" FT mRNA join(9005942..9006024,9009322..9009501,9017196..9017344, FT 9018969..9019061,9022646..9022715,9027718..9027875, FT 9030926..9031040,9034681..9035151) FT /gene="CA6" FT /locus_tag="RP3-477M7.7-001" FT /product="carbonic anhydrase VI" FT /note="match: cDNAs: Em:M57892.1" FT CDS join(9005946..9006024,9009322..9009501,9017196..9017344, FT 9018969..9019061,9022646..9022715,9027718..9027875, FT 9030926..9031040,9034681..9034763) FT /gene="CA6" FT /locus_tag="RP3-477M7.7-001" FT /standard_name="OTTHUMP00000001699" FT /product="carbonic anhydrase VI" FT /note="match: proteins: Sw:P08060 Sw:P18915 Sw:P23280 FT Sw:Q865C0" FT /protein_id="CAC42429.1" FT /translation="MRALVLLLSLFLLGGQAQHVSDWTYSEGALDEAHWPQHYPACGGQ FT RQSPINLQRTKVRYNPSLKGLNMTGYETQAGEFPMVNNGHTVQISLPSTMRMTVADGTV FT YIAQQMHFHWGGASSEISGSEHTVDGIRHVIEIHIVHYNSKYKSYDIAQDAPDGLAVLA FT AFVEVKNYPENTYYSNFISHLANIKYPGQRTTLTGLDVQDMLPRNLQHYYTYHGSLTTP FT PCTENVHWFVLADFVKLSRTQVWKLENSLLDHRNKTIHNDYRRTQPLNHRVVESNFPNQ FT EYTLGSEFQFYLHKIEEILDYLRRALN" FT polyA_signal 9012690..9012695 FT polyA_site 9012710 FT polyA_signal 9035118..9035123 FT polyA_site 9035151 FT misc_feature 9054068 FT /note="Clone_right_end: RP3-477M7" FT misc_feature complement(9056069..9191181) FT /note="annotated region of clone" FT mRNA complement(join(9160364..9164693,9165545..9165739, FT 9171335..9171548,9188704..9189229)) FT /gene="GPR157" FT /locus_tag="RP5-963K15.2-002" FT /product="G protein-coupled receptor 157" FT /note="match: ESTs: Em:AA844234.1 Em:AI200169.1 FT Em:AI631108.1 Em:AI935202.1 Em:AL558921.2 Em:BE741477.1 FT Em:BM719431.1 Em:BU616899.1" FT /note="match: cDNAs: Em:AK089429.1 Em:AY768808.1" FT CDS complement(join(9164478..9164693,9165545..9165739, FT 9171335..9171548,9188704..9189086)) FT /gene="GPR157" FT /locus_tag="RP5-963K15.2-002" FT /standard_name="OTTHUMP00000082681" FT /product="G protein-coupled receptor 157" FT /protein_id="CAM12842.1" FT /translation="MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSR FT ARRLLLFLSLADLLSAASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYL FT YLSIVRAARGPRTDRLLWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEA FT KDHVLWMLLTGKLWEMLAYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSM FT ADKKLVLIPLIFIGLRVWSTVRFVLTLCGSPAVQTPVLVVLHGIGNTFQGGANCIMFVL FT CTRAVRTRLFSLCCCCCSSQPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST" FT mRNA complement(join(9171228..9171548,9188704..9188840)) FT /gene="GPR157" FT /locus_tag="RP5-963K15.2-003" FT /product="G protein-coupled receptor 157" FT /note="match: ESTs: Em:CB995537.1" FT misc_feature complement(9183337) FT /note="Clone_right_end: RP11-315O13" FT mRNA complement(join(9164591..9164693,9171335..9171429)) FT /gene="GPR157" FT /locus_tag="RP5-963K15.2-001" FT /product="G protein-coupled receptor 157" FT /note="match: ESTs: Em:BF992382.1" FT polyA_signal complement(9160378..9160383) FT polyA_site complement(9160364) FT mRNA complement(join(9101844..9101996,9107669..9107793, FT 9117507..9117667,9118211..9118309,9129563..9129653, FT 9145073..9145225,9148431..9148537)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-009" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:BG721117.1 Em:BI461376.1" FT mRNA complement(join(9101917..9101996,9107669..9107793, FT 9117507..9117667,9118211..9118309,9129563..9129653, FT 9145073..9145185,9148431..9148516)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-011" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:BG773094.1" FT mRNA complement(join(9107670..9107793,9117507..9117667, FT 9118211..9118309,9129563..9129653,9145073..9145201, FT 9148431..9148502)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-010" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:BG717925.1" FT misc_feature complement(9144285) FT /note="Clone_left_end: RP4-684L19" FT mRNA complement(join(9101844..9101996,9107669..9107793, FT 9117507..9117667,9118211..9118309,9129563..9129653, FT 9132363..9132444,9133135..9133181)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-008" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:BG720957.1" FT mRNA complement(join(9101844..9101996,9107669..9107793, FT 9117507..9117667,9118211..9118309,9129563..9129653, FT 9132108..9132324)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-006" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:AA233480.1 Em:BG717131.1 FT Em:BI459321.1 Em:BI461273.1 Em:BI825365.1" FT mRNA complement(join(9101844..9101996,9107669..9107793, FT 9117507..9117667,9118211..9118309,9129563..9129653, FT 9131732..9131786)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-007" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:BG722340.1 Em:BI561116.1" FT mRNA complement(join(9117557..9117667,9118211..9118309, FT 9129563..9129653,9129757..9129910)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-005" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:AA442103.1" FT mRNA complement(join(9095166..9097848,9097956..9098083, FT 9098490..9098565,9098887..9098988,9099611..9099721, FT 9099859..9100046,9100123..9100248,9101844..9101996, FT 9107669..9107793,9117507..9117667,9118211..9118309, FT 9129563..9129775)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-001" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:AA747436.1 Em:AW467506.1 FT Em:BU430420.1 Em:CB986744.1" FT /note="match: cDNAs: Em:BC001692.1 Em:BC001692.2 FT Em:BC001820.2 Em:M55531.1" FT mRNA complement(join(9100139..9101996,9107669..9107793, FT 9117507..9117667,9118211..9118309,9129563..9129663)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-002" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: cDNAs: Em:BC035878.1" FT CDS complement(join(9101680..9101996,9107669..9107793, FT 9117507..9117667,9118211..9118309,9129563..9129595)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-002" FT /standard_name="OTTHUMP00000001705" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: proteins: Tr:Q8IVB3" FT /protein_id="CAI23457.1" FT /translation="MEQQDQSMKEGRLTLVLALATLIAAFGSSFQYGYNVAAVNSPALL FT MQQFYNETYYGRTGEFMEDFPLTLLWSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLF FT NNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALG FT VVPQLFITVGILVAQIFGLRNLLANVDGEFRTSREHPHPFTTTLGPLLVFQSHHHRTGL FT SADWSLLTGWMSLGGPSCPEPT" FT CDS complement(join(9097645..9097848,9097956..9098083, FT 9098490..9098565,9098887..9098988,9099611..9099721, FT 9099859..9100046,9100123..9100248,9101844..9101996, FT 9107669..9107793,9117507..9117667,9118211..9118309, FT 9129563..9129595)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-001" FT /standard_name="OTTHUMP00000001704" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: proteins: Sw:P22732 Sw:P46408 Sw:Q863Y9 FT Sw:Q9WV38" FT /protein_id="CAI23458.1" FT /translation="MEQQDQSMKEGRLTLVLALATLIAAFGSSFQYGYNVAAVNSPALL FT MQQFYNETYYGRTGEFMEDFPLTLLWSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLF FT NNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALG FT VVPQLFITVGILVAQIFGLRNLLANVDGWPILLGLTGVPAALQLLLLPFFPESPRYLLI FT QKKDEAAAKKALQTLRGWDSVDREVAEIRQEDEAEKAAGFISVLKLFRMRSLRWQLLSI FT IVLMGGQQLSGVNAIYYYADQIYLSAGVPEEHVQYVTAGTGAVNVVMTFCAVFVVELLG FT RRLLLLLGFSICLIACCVLTAALALQDTVSWMPYISIVCVISYVIGHALGPSPIPALLI FT TEIFLQSSRPSAFMVGGSVHWLSNFTVGLIFPFIQEGLGPYSFIVFAVICLLTTIYIFL FT IVPETKAKTFIEINQIFTKMNKVSEVYPEKEELKELPPVTSEQ" FT mRNA complement(join(9101915..9101996,9107669..9107788, FT 9118238..9118309,9129241..9129308)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-004" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:CB046368.1" FT mRNA complement(join(9098490..9098565,9098887..9098988, FT 9099611..9099954)) FT /gene="SLC2A5" FT /locus_tag="RP5-963K15.1-003" FT /product="solute carrier family 2 (facilitated FT glucose/fructose transporter), member 5" FT /note="match: ESTs: Em:AI214129.1" FT polyA_signal complement(9097026..9097031) FT polyA_site complement(9097005) FT polyA_signal complement(9095169..9095174) FT polyA_site complement(9095166) FT mRNA complement(join(9063359..9063577,9064811..9064938, FT 9067369..9067444,9070202..9070303,9073584..9073694, FT 9074740..9074927,9075176..9075301,9078282..9078434, FT 9079268..9079392,9082977..9083137,9085035..9085133, FT 9086354..9086404)) FT /gene="SLC2A7" FT /locus_tag="RP5-963K15.3-001" FT /product="solute carrier family 2 (facilitated glucose FT transporter), member 7" FT /note="match: cDNAs: Em:AY571960.1" FT CDS complement(join(9063359..9063577,9064811..9064938, FT 9067369..9067444,9070202..9070303,9073584..9073694, FT 9074740..9074927,9075176..9075301,9078282..9078434, FT 9079268..9079392,9082977..9083137,9085035..9085133, FT 9086354..9086404)) FT /gene="SLC2A7" FT /locus_tag="RP5-963K15.3-001" FT /standard_name="OTTHUMP00000159095" FT /product="solute carrier family 2 (facilitated glucose FT transporter), member 7" FT /note="match: proteins: Tr:Q6PXP3" FT /protein_id="CAI23459.3" FT /translation="MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVV FT NTPHKVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGR FT KGTLLINNIFAIIPAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKN FT LRGMVGTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPES FT PRYSLIQKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLR FT WQLLSIIVLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAV FT LVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSP FT VPSVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFIIFAGICLLT FT AIYIYVVIPETKGKTFVEINRIFAKRNRVKLPEEKEETIDAGPPTASPAKETSF" FT misc_feature complement(9059787..9059896) FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 9193181 FT /note="Clone_right_end: RP5-963K15" FT misc_feature 9201304..9201333 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT misc_feature 9202494..9202592 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT misc_feature 9212534 FT /note="Clone_left_end: RP3-510D11" FT misc_feature complement(9214534..9341683) FT /note="annotated region of clone" FT polyA_site 9331396 FT polyA_signal 9331376..9331381 FT mRNA join(9325589..9328096,9331204..9331396) FT /gene="H6PD" FT /locus_tag="RP3-510D11.3-002" FT /product="hexose-6-phosphate dehydrogenase (glucose FT 1-dehydrogenase)" FT /note="match: cDNAs: Em:AK026460.1" FT misc_feature complement(9322869..9322914) FT /note="Single clone region" FT CDS join(9304994..9305620,9307025..9307142,9322118..9322387, FT 9323568..9324928) FT /gene="H6PD" FT /locus_tag="RP3-510D11.3-001" FT /standard_name="OTTHUMP00000001703" FT /product="hexose-6-phosphate dehydrogenase (glucose FT 1-dehydrogenase)" FT /protein_id="CAI95702.1" FT /translation="MWNMLIVAMCLALLGCLQAQELQGHVSIILLGATGDLAKKYLWQG FT LFQLYLDEAGRGHSFSFHGAALTAPKQGQELMAKALESLSCPKDMAPSHCAEHKDQFLQ FT LSQYRQLKTAEDYQALNKDIEAQLQHAGLREAGRIFYFSVPPFAYEDIARNINSSCRPG FT PGAWLRVVLEKPFGHDHFSAQQLATELGTFFQEEEMYRVDHYLGKQAVAQILPFRDQNR FT KALDGLWNRHHVERVEIIMKETVDAEGRTSFYEEYGVIRDVLQNHLTEVLTLVAMELPH FT NVSSAEAVLRHKLQVFQALRGLQRGSAVVGQYQSYSEQVRRELQKPDSFHSLTPTFAAV FT LVHIDNLRWEGVPFILMSGKALDERVGYARILFKNQACCVQSEKHWAAAQSQCLPRQLV FT FHIGHGDLGSPAVLVSRNLFRPSLPSSWKEMEGPPGLRLFGSPLSDYYAYSPVRERDAH FT SVLLSHIFHGRKNFFITTENLLASWNFWTPLLESLAHKAPRLYPGGAENGRLLDFEFSS FT GRLFFSQQQPEQLVPGPGPAPMPSDFQVLRAKYRESPLVSAWSEELISKLANDIEATAV FT RAVRRFGQFHLALSGGSSPVALFQQLATAHYGFPWAHTHLWLVDERCVPLSDPESNFQG FT LQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSSFDLVLLGMG FT ADGHTASLFPQSPTGLDGEQLVVLTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMKRE FT ITTLVSRVGHEPKKWPISGVLPHSGQLVWYMDYDAFLG" FT mRNA join(9294863..9295125,9304984..9305620,9307025..9307142, FT 9322118..9322387,9323568..9331396) FT /gene="H6PD" FT /locus_tag="RP3-510D11.3-001" FT /product="hexose-6-phosphate dehydrogenase (glucose FT 1-dehydrogenase)" FT misc_feature complement(9280280..9280383) FT /note="Single clone region" FT mRNA complement(join(9228327..9228424,9242066..9242354, FT 9243690..9243809,9262638..9262678)) FT /locus_tag="RP3-510D11.1-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:AK123145.1" FT misc_feature complement(9261439..9261525) FT /note="Single clone region" FT misc_feature complement(9248115) FT /note="Clone_right_end: RP3-324M8" FT mRNA join(9242271..9242375,9243692..9243855) FT /locus_tag="RP3-510D11.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA374861.1" FT misc_feature complement(9214534) FT /note="Clone_left_end: RP3-510D11" FT misc_feature complement(9341684..9426699) FT /note="annotated region of clone" FT CDS join(9415951..9416644,AL358252.13:908..1035) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-001" FT /standard_name="OTTHUMP00000001398" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: proteins: Sw:Q96BD6.1 Sw:Q9D5L7.1 FT Tr:Q7ZX62.1" FT /protein_id="CAM12843.1" FT /translation="MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPP FT VSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITW FT AMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPA FT FLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEI FT RMRYLNGLDPEPLPLMDLCRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ" FT mRNA join(9415766..9416644,AL358252.13:908..1035) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-002" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: cDNAs: Em:AF403026.1" FT CDS 9415951..>9416556 FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-004" FT /standard_name="OTTHUMP00000190856" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /protein_id="CAM12844.1" FT /translation="MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPP FT VSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITW FT AMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPA FT FLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFR" FT mRNA join(9411490..9411669,9415802..9416644, FT AL358252.13:908..1323) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-003" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: cDNAs: Em:AF403036.1 Em:AK015181.1" FT /note="match: ESTs: Em:BY714732.1" FT mRNA join(9354587..9354653,9415802..>9416556) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-004" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: ESTs: Em:CK791839.1" FT mRNA join(9352939..9353130,9415802..9416644, FT AL358252.13:908..2992) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-001" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: cDNAs: Em:AB209559.1 Em:AF131840.1 FT Em:AK026046.1 Em:AK225417.1 Em:BC015711.1 Em:CR609804.1" FT /note="match: ESTs: Em:BU163641.1 Em:BU185168.1 FT Em:BU685023.1 Em:BX357512.1 Em:BX367079.2 Em:CN258965.1 FT Em:DA888853.1" FT misc_feature complement(9341684) FT /note="Clone_left_end: RP3-324M8" FT misc_feature 9426700..9448757 FT /note="annotated region of clone" FT polyA_signal 9427902..9427907 FT polyA_site 9427924 FT polyA_signal 9429563..9429568 FT polyA_site 9429591 FT CDS join(complement(AL008734.10:10056..10749),9427507..9427634) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-001" FT /standard_name="OTTHUMP00000001398" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: proteins: Sw:Q96BD6.1 Sw:Q9D5L7.1 FT Tr:Q7ZX62.1" FT /protein_id="CAI14376.2" FT /translation="MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPP FT VSYDVQLLHSWNNNDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITW FT AMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPA FT FLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEI FT RMRYLNGLDPEPLPLMDLCRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ" FT mRNA join(complement(AL008734.10:10056..10934),9427507..9427634) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-002" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: cDNAs: Em:AF403026.1" FT mRNA join(complement(AL008734.10:15031..15210), FT complement(AL008734.10:10056..10898),9427507..9427922) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-003" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: cDNAs: Em:AF403036.1 Em:AK015181.1" FT /note="match: ESTs: Em:BY714732.1" FT mRNA join(complement(AL008734.10:73570..73761), FT complement(AL008734.10:10056..10898),9427507..9429591) FT /gene="SPSB1" FT /locus_tag="RP3-324M8.1-001" FT /product="splA/ryanodine receptor domain and SOCS box FT containing 1" FT /note="match: cDNAs: Em:AB209559.1 Em:AF131840.1 FT Em:AK026046.1 Em:AK225417.1 Em:BC015711.1 Em:CR609804.1" FT /note="match: ESTs: Em:BU163641.1 Em:BU185168.1 FT Em:BU685023.1 Em:BX357512.1 Em:BX367079.2 Em:CN258965.1 FT Em:DA888853.1" FT misc_feature 9450757 FT /note="Clone_right_end: RP11-476D13" FT misc_feature 9488067 FT /note="Clone_left_end: RP13-392I16" FT misc_feature 9490067..9630982 FT /note="annotated region of clone" FT misc_feature 9530056..9530181 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 9555125..9555129 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(9561151..9561607,9563280..9563530)) FT /locus_tag="RP13-392I16.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG698340.1" FT misc_feature 9597485..9597517 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(9599541..9599806,9613684..9613863,9627342..9627419, FT 9630316..9630416,AL954705.14:4422..4488, FT AL954705.14:11030..11310,AL954705.14:13375..13849) FT /gene="SLC25A33" FT /locus_tag="RP13-392I16.2-001" FT /product="solute carrier family 25, member 33" FT CDS join(9599751..9599806,9613684..9613863,9627342..9627419, FT 9630316..9630416,AL954705.14:4422..4488, FT AL954705.14:11030..11310,AL954705.14:13375..13577) FT /gene="SLC25A33" FT /locus_tag="RP13-392I16.2-001" FT /standard_name="OTTHUMP00000001435" FT /product="solute carrier family 25, member 33" FT /protein_id="CAI17318.1" FT /translation="MATGGQQKENTLLHLFAGGCGGTVGAIFTCPLEVIKTRLQSSRLA FT LRTVYYPQVHLGTISGAGMVRPTSVTPGLFQVLKSILEKEGPKSLFRGLGPNLVGVAPS FT RAVYFACYSKAKEQFNGIFVPNSNIVHIFSAGSAAFITNSLMNPIWMVKTRMQLEQKVR FT GSKQMNTLQCARYVYQTEGIRGFYRGLTASYAGISETIICFAIYESLKKYLKEAPLASS FT ANGTEKNSTSFFGLMAAAALSKGCASCIAYPHEVIRTRLREEGTKYKSFVQTARLVFRE FT EGYLAFYRGLFAQLIRQIPNTAIVLSTYELIVYLLEDRTQ" FT misc_feature 9603659..9603679 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 9626983 FT /note="Clone_left_end: RP13-15M17" FT misc_feature 9630983..9693257 FT /note="annotated region of clone" FT CDS 9636485..9637043 FT /pseudo FT /locus_tag="RP13-15M17.1-001" FT /product="ribosomal protein L9 (RPL9) pseudogene" FT misc_feature 9646710..9646733 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(9648980..9649101,9655948..9656068,9656917..9657111, FT 9658507..9658683,9661163..9661512,9662127..9665007) FT /gene="RP13-15M17.2" FT /locus_tag="RP13-15M17.2-003" FT /product="novel protein" FT /note="match: ESTs: Em:AI143773.1 Em:AI360203.1 FT Em:BM013352.1 Em:BQ070602.1 Em:BQ072123.1 Em:BQ226798.1 FT Em:BQ581138.1 Em:BU679706.1" FT /note="match: cDNAs: Em:AK086543.1" FT mRNA join(9648980..9649101,9655948..9656068,9656917..9657111, FT 9658507..9658683,9661163..9661512,9662127..9662330, FT 9667615..9667847,9669898..9669969,9670564..9670863, FT 9671811..9671948,9673044..9674907) FT /gene="RP13-15M17.2" FT /locus_tag="RP13-15M17.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:AI005087.1 Em:AL554295.2 FT Em:AW001211.1 Em:BE262061.1 Em:BE302686.1 Em:BE676679.1 FT Em:BF311061.1 Em:BG828926.1 Em:BI199425.1 Em:BI820866.1 FT Em:BM193195.1 Em:BM726575.1 Em:BQ050621.1 Em:BQ425762.1 FT Em:BX403270.1" FT /note="match: cDNAs: Em:AK078532.1" FT CDS join(9648989..9649101,9655948..9656068,9656917..9657111, FT 9658507..9658683,9661163..9661512,9662127..9662349) FT /gene="RP13-15M17.2" FT /locus_tag="RP13-15M17.2-003" FT /standard_name="OTTHUMP00000063150" FT /product="novel protein" FT /note="match: proteins: Tr:Q8BNY3 Tr:Q8C397" FT /protein_id="CAI17268.1" FT /translation="MEGVSALLARCPTAGLAGGLGVTACAAAGVLLYRIARRMKPTHTM FT VNCWFCNQDTLVPYGNRNCWDCPHCEQYNGFQENGDYNKPIPAQYLEHLNHVVSSAPSL FT RDPSQPQQWVSSQVLLCKRCNHHQTTKIKQLAAFAPREEGRYDEEVEVYRHHLEQMYKL FT CRPCQAAVEYYIKHQNRQLRALLLSHQFKRREADQTHAQNFSSAVKSPVQVILLRALAF FT LACAFLLTTALYGASGHFAPGTTVPLALPPGGNGSATPDNGTTPGAEGWRQLLGLLPEH FT MAEKLCEAWAFGQSHQTGVVALGLLTCLLAMLLAGRIRLRRIDAFCTCLWALLLGLHLA FT EQHLQAASPSWLDTLKFSTTSLCCLVGFTAAVATRKATGPRRFRPRRSEKQP" FT CDS join(9648989..9649101,9655948..9656068,9656917..9657111, FT 9658507..9658683,9661163..9661512,9662127..9662330, FT 9667615..9667847,9669898..9669969,9670564..9670863, FT 9671811..9671948,9673044..9673141) FT /gene="RP13-15M17.2" FT /locus_tag="RP13-15M17.2-002" FT /standard_name="OTTHUMP00000063149" FT /product="novel protein" FT /protein_id="CAI17269.1" FT /translation="MEGVSALLARCPTAGLAGGLGVTACAAAGVLLYRIARRMKPTHTM FT VNCWFCNQDTLVPYGNRNCWDCPHCEQYNGFQENGDYNKPIPAQYLEHLNHVVSSAPSL FT RDPSQPQQWVSSQVLLCKRCNHHQTTKIKQLAAFAPREEGRYDEEVEVYRHHLEQMYKL FT CRPCQAAVEYYIKHQNRQLRALLLSHQFKRREADQTHAQNFSSAVKSPVQVILLRALAF FT LACAFLLTTALYGASGHFAPGTTVPLALPPGGNGSATPDNGTTPGAEGWRQLLGLLPEH FT MAEKLCEAWAFGQSHQTGVVALGLLTCLLAMLLAGRIRLRRIDAFCTCLWALLLGLHLA FT EQHLQAASPSWLDTLKFSTTSLCCLVGFTAAVATRKATGPRRFRPRRFFPGDSAGLFPT FT SPSLAIPHPSVGGSPASLFIPSPPSFLPLANQQLFRSPRRTSPSSLPGRLSRALSLGTI FT PSLTRADSGYLFSGSRPPSQVSRSGEFPVSDYFSLLSGSCPSSPLPSPAPSVAGSVASS FT SGSLRHRRPLISPARLNLKGQKLLLFPSPPGEAPTTPSSSDEHSPHNGSLFTMEPPHVP FT RKPPLQDVKHALDLRSKLERGSACSNRSIKKEDDSSQSSTCVVDTTTRGCSEEAATWRG FT RFGPSLVRGLLAVSLAANALFTSVFLYQSLR" FT CDS join(<9656955..9657111,9658507..9658683,9661163..9661512, FT 9662127..9662330,9667615..9667847,9670564..9670863, FT 9671811..9671948,9673044..9673141) FT /codon_start=2 FT /gene="RP13-15M17.2" FT /locus_tag="RP13-15M17.2-001" FT /standard_name="OTTHUMP00000063148" FT /product="novel protein" FT /protein_id="CAI17270.1" FT /translation="EHLNHVVSSAPSLRDPSQPQQWVSSQVLLCKRCNHHQTTKIKQLA FT AFAPREEGRYDEEVEVYRHHLEQMYKLCRPCQAAVEYYIKHQNRQLRALLLSHQFKRRE FT ADQTHAQNFSSAVKSPVQVILLRALAFLACAFLLTTALYGASGHFAPGTTVPLALPPGG FT NGSATPDNGTTPGAEGWRQLLGLLPEHMAEKLCEAWAFGQSHQTGVVALGLLTCLLAML FT LAGRIRLRRIDAFCTCLWALLLGLHLAEQHLQAASPSWLDTLKFSTTSLCCLVGFTAAV FT ATRKATGPRRFRPRRFFPGDSAGLFPTSPSLAIPHPSVGGSPASLFIPSPPSFLPLANQ FT QLFRSPRRTSPSSLPGRLSRALSLGTIPSLTRADYFSLLSGSCPSSPLPSPAPSVAGSV FT ASSSGSLRHRRPLISPARLNLKGQKLLLFPSPPGEAPTTPSSSDEHSPHNGSLFTMEPP FT HVPRKPPLQDVKHALDLRSKLERGSACSNRSIKKEDDSSQSSTCVVDTTTRGCSEEAAT FT WRGRFGPSLVRGLLAVSLAANALFTSVFLYQSLR" FT mRNA join(<9656955..9657111,9658507..9658683,9661163..9661512, FT 9662127..9662330,9667615..9667847,9670564..9670863, FT 9671811..9671948,9673044..9674931) FT /gene="RP13-15M17.2" FT /locus_tag="RP13-15M17.2-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BX648377.1" FT polyA_signal 9664980..9664985 FT polyA_site 9665007 FT polyA_signal 9674898..9674903 FT polyA_signal 9674911..9674916 FT polyA_site 9674931 FT misc_feature 9678240 FT /note="Clone_right_end: RP13-392I16" FT mRNA join(AL928921.21:111475..111740,AL928921.21:125618..125797, FT AL928921.21:139276..139353,AL928921.21:142250..142350, FT 9633404..9633470,9640012..9640292,9642357..9642831) FT /gene="SLC25A33" FT /locus_tag="RP13-392I16.2-001" FT /product="solute carrier family 25, member 33" FT CDS join(AL928921.21:111685..111740,AL928921.21:125618..125797, FT AL928921.21:139276..139353,AL928921.21:142250..142350, FT 9633404..9633470,9640012..9640292,9642357..9642559) FT /gene="SLC25A33" FT /locus_tag="RP13-392I16.2-001" FT /standard_name="OTTHUMP00000001435" FT /product="solute carrier family 25, member 33" FT /protein_id="CAI17271.1" FT /translation="MATGGQQKENTLLHLFAGGCGGTVGAIFTCPLEVIKTRLQSSRLA FT LRTVYYPQVHLGTISGAGMVRPTSVTPGLFQVLKSILEKEGPKSLFRGLGPNLVGVAPS FT RAVYFACYSKAKEQFNGIFVPNSNIVHIFSAGSAAFITNSLMNPIWMVKTRMQLEQKVR FT GSKQMNTLQCARYVYQTEGIRGFYRGLTASYAGISETIICFAIYESLKKYLKEAPLASS FT ANGTEKNSTSFFGLMAAAALSKGCASCIAYPHEVIRTRLREEGTKYKSFVQTARLVFRE FT EGYLAFYRGLFAQLIRQIPNTAIVLSTYELIVYLLEDRTQ" FT misc_feature 9693258..9855191 FT /note="annotated region of clone" FT misc_feature 9693258 FT /note="Clone_left_end: RP11-558F24" FT misc_feature 9703505..9703556 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(9711803..9711860,9751525..9751629,9770482..9770654, FT 9775599..9775827,9775907..9776136,9776498..9776677, FT 9777017..9777166,9777595..9777684,9778752..9778973, FT 9779979..9780075,9780170..9780300,9780669..9780719, FT 9780800..9780967,9781185..9781306,9781502..9781645, FT 9781819..9781918,9782033..9782211,9782302..9782414, FT 9782586..9782664,9783183..9783350,9784027..9784150, FT 9784334..9784479,9784862..9784994,9786967..9788977) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-001" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /note="match: ESTs: Em:AA905399.1 Em:AL135069.1 FT Em:AL699862.1 Em:AL707253.1 Em:AW205444.1 Em:AW499604.1 FT Em:AW499827.1 Em:AW500671.1 Em:AW501532.1 Em:AW503896.1 FT Em:AW504513.1 Em:AW505003.1 Em:AW505305.1 Em:BE247490.1 FT Em:BE819202.1 Em:BE892546.1 Em:BF432645.1 Em:BF901979.1 FT Em:BG177675.1 Em:BG752254.1 Em:BG764936.1 Em:BI024765.1 FT Em:BI062902.1 Em:BM147994.1 Em:BM149716.1 Em:BM151830.1 FT Em:BM454223.1 Em:BM455643.1 Em:BM466963.1 Em:BM905504.1 FT Em:BM917771.1 Em:BM927390.1 Em:BQ050479.1 Em:BQ052158.1 FT Em:BQ053439.1 Em:BQ059472.1 Em:BQ061774.1 Em:BQ226736.1 FT Em:BQ231014.1 Em:BQ436769.1 Em:BQ641415.1 Em:BQ677923.1 FT Em:BQ679261.1 Em:BQ679872.1 Em:BQ680765.1 Em:BQ683169.1 FT Em:BQ684103.1 Em:BQ708914.1 Em:BQ877521.1 Em:BQ878471.1 FT Em:BQ883233.1 Em:BU163998.1 Em:BU164465.1 Em:BU177784.1 FT Em:BU429372.1 Em:BU430485.1 Em:BU431610.1 Em:BU431658.1 FT Em:BX481261.1 Em:BX484762.1 Em:BX506013.1 Em:CA306388.1 FT Em:CA307257.1 Em:CA427279.1 Em:CA427830.1 Em:CF136974.1 FT Em:CF137881.1 Em:CF138629.1 Em:N42945.1" FT /note="match: cDNAs: Em:U86453.1 Em:U86587.1 Em:Y10055.1" FT mRNA join(9711818..9711860,9770163..9770338,9770482..9770654, FT 9775599..9775806,9787978..9788977) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-002" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /note="match: ESTs: Em:BI908749.1" FT /note="match: cDNAs: Em:BC030263.1" FT misc_feature 9711852..9712169 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT polyA_site complement(9712668) FT polyA_signal complement(9712700..9712705) FT mRNA complement(join(9712668..9714101,9714256..9714644)) FT /locus_tag="RP11-558F24.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA827203.1 Em:BG759098.1 FT Em:BI911864.1 Em:CD684426.1" FT /note="match: cDNAs: Em:AK097325.1 Em:BC016063.1" FT CDS complement(join(9713837..9714101,9714256..9714494)) FT /locus_tag="RP11-558F24.1-001" FT /standard_name="OTTHUMP00000001601" FT /product="novel protein" FT /note="match: proteins: Tr:Q8N853" FT /protein_id="CAI15698.1" FT /translation="MPSQSACPVLSTAPGTPCDLRKHLLNMVSEEKRSPQLSAKTWRRG FT LRLQKRRNALFLPEGDICVVGSTSGARALIPETSKLERSGTVIAYCNLELLASSDPPVW FT ASQSTGMTGMSYRSQPQLGFKSTPPAHSSVFHHSVKAPKEDQAQEAASRPLTSQDGWNP FT NIKK" FT mRNA complement(join(9789084..9790763,9791264..9791448, FT 9791819..9791954,9793459..9793604,9794030..9794200, FT 9795006..9795232,9795525..9795673,9795943..9796100, FT 9797556..9797612,9801152..9801314,9803942..9804063, FT 9804453..9804701,9809519..9809704,9809822..9809971, FT 9811531..9811739,9815172..9815367,9816539..9816568, FT 9833330..9833452,AL357140.33:28510..29393)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-001" FT /product="calsyntenin 1" FT /note="match: cDNAs: Em:AB020718.1 Em:AJ289016.1" FT /note="match: ESTs: Em:AI660578.1 Em:AU279459.1 FT Em:BE719283.1 Em:BE719931.1 Em:BF194803.1 Em:BF433688.1 FT Em:BF436692.1 Em:BF956587.1 Em:BG323744.1 Em:BG747646.1 FT Em:BG753606.1 Em:BG832175.1 Em:BG896947.1 Em:BI084726.1 FT Em:BI821895.1 Em:BM413684.1 Em:BM558386.1 Em:BM915553.1 FT Em:BM970036.1 Em:BQ055457.1 Em:BQ063711.1 Em:BQ070651.1 FT Em:BQ182086.1 Em:BQ183208.1 Em:BQ307588.1 Em:BQ331345.1 FT Em:BQ643420.1 Em:BQ671310.1 Em:BQ678166.1 Em:BQ888843.1 FT Em:BQ935804.1 Em:BU158086.1 Em:BU164383.1 Em:BU186126.1 FT Em:BU197086.1 Em:BU541890.1 Em:BU542796.1 Em:BU553187.1 FT Em:BU553598.1 Em:BU684980.1 Em:BU845922.1 Em:BU849209.1 FT Em:BU849462.1 Em:BU855380.1 Em:BU856806.1 Em:BU859664.1 FT Em:BU944695.1 Em:BX337308.1 Em:CA392926.1 Em:CA414791.1 FT Em:CA450571.1 Em:CB132727.1 Em:CB851788.1 Em:CD515698.1 FT Em:CD518741.1 Em:CF130833.1 Em:CF455216.1 Em:CF457338.1 FT Em:W28898.1" FT CDS complement(join(9790566..9790763,9791264..9791448, FT 9791819..9791954,9793459..9793604,9794030..9794200, FT 9795006..9795232,9795525..9795673,9795943..9796100, FT 9797556..9797612,9801152..9801314,9803942..9804063, FT 9804453..9804701,9809519..9809704,9809822..9809971, FT 9811531..9811739,9815172..9815367,9816539..9816568, FT 9833330..9833452,AL357140.33:28510..28600)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-001" FT /standard_name="OTTHUMP00000001597" FT /product="calsyntenin 1" FT /note="match: proteins: Sw:O94985 Sw:Q9EPL2" FT /protein_id="CAI15700.1" FT /translation="MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGI FT VTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKS FT TGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPV FT FKEKSYKATVIEGKQYDSILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNT FT EKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGAL FT AVFPNIHLETCDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPS FT PSGSLNWTMGLPTDNGHDSDQVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGR FT KKETILCSSDKTDMNRHHYSLYVHGCRLIFLFRQDPSEEKKYRPAEFHWKLNQVCDEEW FT HHYVLNVEFPSVTLYVDGTSHEPFSVTEDYPLHPSKIETQLVVGACWQEFSGVENDNET FT EPVTVASAGGDLHMTQFFRGNLAGLTLRSGKLADKKVIDCLYTCKEGLDLQVLEDSGRG FT VQIQAHPSQLVLTLEGEDLGELDKAMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATC FT ISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTITREVEP FT EGDGAEDPTVQESLVSEEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKGIEVSSS FT ELGMTFTGVDTMASYEEVLHLLRYRNWHARSLLDRKFKLICSELNGRYISNEFKVEVNV FT IHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVVIVVCVSFL FT VFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEE FT EEEEESEDGEEEDDITSAESESSEEEEGEQGDPQNATRQQQLEWDDSTLSY" FT mRNA complement(join(9789086..9790763,9791264..9791448, FT 9791819..9791954,9793459..9793604,9794030..9794200, FT 9795006..9795232,9795525..9795673,9795943..9796100, FT 9797556..9797612,9801152..9801314,9803942..9804063, FT 9804453..9804701,9809519..9809704,9809822..9809971, FT 9811531..9811739,9815172..9815367,9833330..9833452, FT AL357140.33:28510..28851)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-002" FT /product="calsyntenin 1" FT /note="match: cDNAs: Em:BC033902.2 Em:BC053843.1" FT /note="match: ESTs: Em:BF170469.1 Em:BI822437.1 FT Em:BM470071.1 Em:BM932144.1 Em:BQ054642.1 Em:BQ308737.1 FT Em:BX361607.1 Em:BX416440.1 Em:CA867954.1" FT CDS complement(join(9790566..9790763,9791264..9791448, FT 9791819..9791954,9793459..9793604,9794030..9794200, FT 9795006..9795232,9795525..9795673,9795943..9796100, FT 9797556..9797612,9801152..9801314,9803942..9804063, FT 9804453..9804701,9809519..9809704,9809822..9809971, FT 9811531..9811739,9815172..9815367,9833330..9833452, FT AL357140.33:28510..28600)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-002" FT /standard_name="OTTHUMP00000001598" FT /product="calsyntenin 1" FT /protein_id="CAI15699.1" FT /translation="MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGI FT VTENDNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKE FT KLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATV FT IEGKQYDSILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQ FT YKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLET FT CDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSGSLNWTMG FT LPTDNGHDSDQVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGRKKETILCSSD FT KTDMNRHHYSLYVHGCRLIFLFRQDPSEEKKYRPAEFHWKLNQVCDEEWHHYVLNVEFP FT SVTLYVDGTSHEPFSVTEDYPLHPSKIETQLVVGACWQEFSGVENDNETEPVTVASAGG FT DLHMTQFFRGNLAGLTLRSGKLADKKVIDCLYTCKEGLDLQVLEDSGRGVQIQAHPSQL FT VLTLEGEDLGELDKAMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATCISVPPVDGYV FT MVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTV FT QESLVSEEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVD FT TMASYEEVLHLLRYRNWHARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPMEHA FT NHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFR FT IRAAHRRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGE FT EEDDITSAESESSEEEEGEQGDPQNATRQQQLEWDDSTLSY" FT CDS complement(join(9720892..9720973,9722368..9722686)) FT /pseudo FT /locus_tag="RP11-558F24.2-001" FT /product="ribosomal protein L26-like 1 pseudogene FT (RPL26L1)" FT /note="match: proteins: Sw:P12749 Sw:P47832 Sw:P61255 FT Sw:Q9UNX3 Tr:P61256 Tr:P61257 Tr:Q7PQW7 Tr:Q7SXA1 Tr:Q862N4 FT Tr:Q8ITA3 Tr:Q90YU2" FT mRNA complement(join(9739858..9740176,9740770..9741193, FT 9747393..9747632)) FT /locus_tag="RP11-558F24.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL523098.2 Em:AL523099.2 FT Em:BQ081849.1" FT misc_feature 9747534..9747658 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(9748234..9748371,9751525..9751629,9751733..9752004) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-004" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /note="match: ESTs: Em:AA186335.1 Em:AA188126.1" FT misc_feature 9749568..9749665 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT misc_feature 9769408..9769409 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(9770256..9770338,9770482..9770654,9775599..9775827, FT 9775907..9776136,9776498..9776677,9777122..9777166, FT 9777595..9777684,9778752..9778973,9779979..9780075, FT 9780170..9780300,9780492..9780719,9780800..9780967, FT 9781185..9781306,9781502..9781645,9781819..9781918, FT 9782033..9782211,9782302..9782414,9782586..9782664, FT 9783183..9783350,9784027..9784150,9784334..9784479, FT 9784862..9784994,9786967..9787290) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-003" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /note="match: cDNAs: Em:U57843.1" FT CDS join(9770514..9770654,9775599..9775827,9775907..9776136, FT 9776498..9776677,9777017..9777166,9777595..9777684, FT 9778752..9778973,9779979..9780075,9780170..9780300, FT 9780669..9780719,9780800..9780967,9781185..9781306, FT 9781502..9781645,9781819..9781918,9782033..9782211, FT 9782302..9782414,9782586..9782664,9783183..9783350, FT 9784027..9784150,9784334..9784479,9784862..9784994, FT 9786967..9787104) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-001" FT /standard_name="OTTHUMP00000001595" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /note="match: proteins: Sw:O00329 Sw:O35904 Tr:Q8BS14" FT /protein_id="CAI15703.1" FT /translation="MPPGVDCPMEFWTKEENQSVVVDFLLPTGVYLNFPVSRNANLSTI FT KQLLWHRAQYEPLFHMLSGPEAYVFTCINQTAEQQELEDEQRRLCDVQPFLPVLRLVAR FT EGDRVKKLINSQISLLIGKGLHEFDSLCDPEVNDFRAKMCQFCEEAAARRQQLGWEAWL FT QYSFPLQLEPSAQTWGPGTLRLPNRALLVNVKFEGSEESFTFQVSTKDVPLALMACALR FT KKATVFRQPLVEQPEDYTLQVNGRHEYLYGSYPLCQFQYICSCLHSGLTPHLTMVHSSS FT ILAMRDEQSNPAPQVQKPRAKPPPIPAKKPSSVSLWSLEQPFRIELIQGSKVNADERMK FT LVVQAGLFHGNEMLCKTVSSSEVSVCSEPVWKQRLEFDINICDLPRMARLCFALYAVIE FT KAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMWPSVPDEKGELLNPTGT FT VRSNPNTDSAAALLICLPEVAPHPVYYPALEKILELGRHSECVHVTEEEQLQLREILER FT RGSGELYEHEKDLVWKLRHEVQEHFPEALARLLLVTKWNKHEDVAQMLYLLCSWPELPV FT LSALELLDFSFPDCHVGSFAIKSLRKLTDDELFQYLLQLVQVLKYESYLDCELTKFLLD FT RALANRKIGHFLFWHLRSEMHVPSVALRFGLILEAYCRGSTHHMKVLMKQGEALSKLKA FT LNDFVKLSSQKTPKPQTKELMHLCMRQEAYLEALSHLQSPLDPSTLLAEVCVEQCTFMD FT SKMKPLWIMYSNEEAGSGGSVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTP FT YGCLPTGDRTGLIEVVLRSDTIANIQLNKSNMAATAAFNKDALLNWLKSKNPGEALDRA FT IEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHFLGNFKTKFGINRERV FT PFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFALMRAAGLPEL FT SCSKDIQYLKDSLALGKTEEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNRQ" FT CDS join(9770514..9770654,9775599..9775827,9775907..9776136, FT 9776498..9776677,9777122..9777166,9777595..9777684, FT 9778752..9778973,9779979..9780075,9780170..9780300, FT 9780492..9780719,9780800..9780967,9781185..9781306, FT 9781502..9781645,9781819..9781918,9782033..9782211, FT 9782302..9782414,9782586..9782664,9783183..9783350, FT 9784027..9784150,9784334..9784479,9784862..9784994, FT 9786967..9787104) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-003" FT /standard_name="OTTHUMP00000001596" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /protein_id="CAI15702.1" FT /translation="MPPGVDCPMEFWTKEENQSVVVDFLLPTGVYLNFPVSRNANLSTI FT KQLLWHRAQYEPLFHMLSGPEAYVFTCINQTAEQQELEDEQRRLCDVQPFLPVLRLVAR FT EGDRVKKLINSQISLLIGKGLHEFDSLCDPEVNDFRAKMCQFCEEAAARRQQLGWEAWL FT QYSFPLQLEPSAQTWGPGTLRLPNRALLVNVKFEGSEESFTFQVSTKDVPLALMACALR FT KKATVFRQPLVEQPEDYTLQVNGRHEYLYGSYPLCQFQVQKPRAKPPPIPAKKPSSVSL FT WSLEQPFRIELIQGSKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVSVCSEPVWKQRL FT EFDINICDLPRMARLCFALYAVIEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKT FT GERCLYMWPSVPDEKGELLNPTGTVRSNPNTDSAAALLICLPEVAPHPVYYPALEKLPG FT GMLLASREWRPELLWMRLHAEDSAPSRMIGVAMPGLGVLPGLVQAPGDAECSRLLQILE FT LGRHSECVHVTEEEQLQLREILERRGSGELYEHEKDLVWKLRHEVQEHFPEALARLLLV FT TKWNKHEDVAQMLYLLCSWPELPVLSALELLDFSFPDCHVGSFAIKSLRKLTDDELFQY FT LLQLVQVLKYESYLDCELTKFLLDRALANRKIGHFLFWHLRSEMHVPSVALRFGLILEA FT YCRGSTHHMKVLMKQGEALSKLKALNDFVKLSSQKTPKPQTKELMHLCMRQEAYLEALS FT HLQSPLDPSTLLAEVCVEQCTFMDSKMKPLWIMYSNEEAGSGGSVGIIFKNGDDLRQDM FT LTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLRSDTIANIQLNKSNMAAT FT AAFNKDALLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESGQ FT LFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYT FT ILRRHGLLFLHLFALMRAAGLPELSCSKDIQYLKDSLALGKTEEEALKHFRVKFNEALR FT ESWKTKVNWLAHNVSKDNRQ" FT mRNA join(9775757..9775827,9775907..9776221) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-005" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /note="match: ESTs: Em:BE819199.1 Em:BE819204.1 FT Em:BE819205.1" FT mRNA join(9776334..9776677,9777017..9777166,9777595..9777639) FT /gene="PIK3CD" FT /locus_tag="RP11-558F24.3-006" FT /product="phosphoinositide-3-kinase, catalytic, delta FT polypeptide" FT /note="match: ESTs: Em:BU429512.1" FT polyA_signal 9788956..9788961 FT polyA_site 9788977 FT polyA_site complement(9789084) FT polyA_signal complement(9789101..9789106) FT mRNA complement(join(9789086..9790763,9791180..9791448, FT 9791819..9791954,9793459..9793544)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-006" FT /product="calsyntenin 1" FT /note="match: ESTs: Em:BF804442.1" FT /note="match: cDNAs: Em:AK056820.1" FT mRNA complement(join(9809546..9809704,9809822..9810225)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-005" FT /product="calsyntenin 1" FT /note="match: ESTs: Em:AI797820.1" FT mRNA complement(join(9789086..9790763,9791264..9791448, FT 9791819..9791954,9793459..9793604,9794030..9794200, FT 9795006..9795232,9795525..9795673,9795943..9796100, FT 9801152..9801314,9803942..9804063,9804453..9804701, FT 9809519..9809704,9809822..9809971,9811531..>9811639)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-003" FT /product="calsyntenin 1" FT /note="match: ESTs: Em:BQ065658.1 Em:BQ354927.1 FT Em:BQ925473.1" FT /note="match: cDNAs: Em:AK000605.1" FT CDS complement(join(9790566..9790763,9791264..9791448, FT 9791819..9791954,9793459..9793604,9794030..9794200, FT 9795006..9795232,9795525..9795673,9795943..9796100, FT 9801152..9801314,9803942..9804063,9804453..9804701, FT 9809519..9809704,9809822..9809971,9811531..>9811639)) FT /codon_start=1 FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-003" FT /standard_name="OTTHUMP00000001599" FT /product="calsyntenin 1" FT /protein_id="CAI15704.1" FT /translation="SILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKL FT NYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVF FT PNIHLETCDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSG FT SLNWTMGLPTDNGHDSDQVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGRKKE FT TILCSSDKTDMNRHHYSLYVHGCRLIFLFRQDPSEEKKYRPAEFHWKLNQVCDEEWHHY FT VLNVEFPSVTLYVDGTSHEPFSVTEDYPLHPSKIETQLVVGACWQGGDLHMTQFFRGNL FT AGLTLRSGKLADKKVIDCLYTCKEGLDLQVLEDSGRGVQIQAHPSQLVLTLEGEDLGEL FT DKAMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATCISVPPVDGYVMVLQPEEPKISL FT SGVHHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHD FT LDTCEVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLL FT RYRNWHARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPMEHANHMAAQPQFVHP FT EHRSFVDLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHRRTMRDQ FT DTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESES FT SEEEEGEQGDPQNATRQQQLEWDDSTLSY" FT misc_feature 9828649..9828671 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 9828948..9829134 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 9855192..10032661 FT /note="annotated region of clone" FT misc_feature 9855192 FT /note="Clone_left_end: RP11-84A14" FT misc_feature 9862358 FT /note="Clone_right_end: RP11-558F24" FT misc_feature 9870200 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 400bp by restriction digest data" FT misc_feature 9883458..9883564 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(AL691449.21:95827..97506, FT AL691449.21:98007..98191,AL691449.21:98562..98697, FT AL691449.21:100202..100347,AL691449.21:100773..100943, FT AL691449.21:101749..101975,AL691449.21:102268..102416, FT AL691449.21:102686..102843,AL691449.21:104299..104355, FT AL691449.21:107895..108057,AL691449.21:110685..110806, FT AL691449.21:111196..111444,AL691449.21:116262..116447, FT AL691449.21:116565..116714,AL691449.21:118274..118482, FT AL691449.21:121915..122110,AL691449.21:123282..123311, FT AL691449.21:140073..140195,9883701..9884584)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-001" FT /product="calsyntenin 1" FT /note="match: cDNAs: Em:AB020718.1 Em:AJ289016.1" FT /note="match: ESTs: Em:AI660578.1 Em:AU279459.1 FT Em:BE719283.1 Em:BE719931.1 Em:BF194803.1 Em:BF433688.1 FT Em:BF436692.1 Em:BF956587.1 Em:BG323744.1 Em:BG747646.1 FT Em:BG753606.1 Em:BG832175.1 Em:BG896947.1 Em:BI084726.1 FT Em:BI821895.1 Em:BM413684.1 Em:BM558386.1 Em:BM915553.1 FT Em:BM970036.1 Em:BQ055457.1 Em:BQ063711.1 Em:BQ070651.1 FT Em:BQ182086.1 Em:BQ183208.1 Em:BQ307588.1 Em:BQ331345.1 FT Em:BQ643420.1 Em:BQ671310.1 Em:BQ678166.1 Em:BQ888843.1 FT Em:BQ935804.1 Em:BU158086.1 Em:BU164383.1 Em:BU186126.1 FT Em:BU197086.1 Em:BU541890.1 Em:BU542796.1 Em:BU553187.1 FT Em:BU553598.1 Em:BU684980.1 Em:BU845922.1 Em:BU849209.1 FT Em:BU849462.1 Em:BU855380.1 Em:BU856806.1 Em:BU859664.1 FT Em:BU944695.1 Em:BX337308.1 Em:CA392926.1 Em:CA414791.1 FT Em:CA450571.1 Em:CB132727.1 Em:CB851788.1 Em:CD515698.1 FT Em:CD518741.1 Em:CF130833.1 Em:CF455216.1 Em:CF457338.1 FT Em:W28898.1" FT CDS complement(join(AL691449.21:97309..97506, FT AL691449.21:98007..98191,AL691449.21:98562..98697, FT AL691449.21:100202..100347,AL691449.21:100773..100943, FT AL691449.21:101749..101975,AL691449.21:102268..102416, FT AL691449.21:102686..102843,AL691449.21:104299..104355, FT AL691449.21:107895..108057,AL691449.21:110685..110806, FT AL691449.21:111196..111444,AL691449.21:116262..116447, FT AL691449.21:116565..116714,AL691449.21:118274..118482, FT AL691449.21:121915..122110,AL691449.21:123282..123311, FT AL691449.21:140073..140195,9883701..9883791)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-001" FT /standard_name="OTTHUMP00000001597" FT /product="calsyntenin 1" FT /note="match: proteins: Sw:O94985 Sw:Q9EPL2" FT /protein_id="CAI16885.1" FT /translation="MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGI FT VTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKS FT TGEGVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPV FT FKEKSYKATVIEGKQYDSILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNT FT EKLNYGKEHQYKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGAL FT AVFPNIHLETCDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPS FT PSGSLNWTMGLPTDNGHDSDQVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGR FT KKETILCSSDKTDMNRHHYSLYVHGCRLIFLFRQDPSEEKKYRPAEFHWKLNQVCDEEW FT HHYVLNVEFPSVTLYVDGTSHEPFSVTEDYPLHPSKIETQLVVGACWQEFSGVENDNET FT EPVTVASAGGDLHMTQFFRGNLAGLTLRSGKLADKKVIDCLYTCKEGLDLQVLEDSGRG FT VQIQAHPSQLVLTLEGEDLGELDKAMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATC FT ISVPPVDGYVMVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTITREVEP FT EGDGAEDPTVQESLVSEEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKGIEVSSS FT ELGMTFTGVDTMASYEEVLHLLRYRNWHARSLLDRKFKLICSELNGRYISNEFKVEVNV FT IHTANPMEHANHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVVIVVCVSFL FT VFMIILGVFRIRAAHRRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEE FT EEEEESEDGEEEDDITSAESESSEEEEGEQGDPQNATRQQQLEWDDSTLSY" FT mRNA complement(join(AL691449.21:95829..97506, FT AL691449.21:98007..98191,AL691449.21:98562..98697, FT AL691449.21:100202..100347,AL691449.21:100773..100943, FT AL691449.21:101749..101975,AL691449.21:102268..102416, FT AL691449.21:102686..102843,AL691449.21:104299..104355, FT AL691449.21:107895..108057,AL691449.21:110685..110806, FT AL691449.21:111196..111444,AL691449.21:116262..116447, FT AL691449.21:116565..116714,AL691449.21:118274..118482, FT AL691449.21:121915..122110,AL691449.21:140073..140195, FT 9883701..9884042)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-002" FT /product="calsyntenin 1" FT /note="match: cDNAs: Em:BC033902.2 Em:BC053843.1" FT /note="match: ESTs: Em:BF170469.1 Em:BI822437.1 FT Em:BM470071.1 Em:BM932144.1 Em:BQ054642.1 Em:BQ308737.1 FT Em:BX361607.1 Em:BX416440.1 Em:CA867954.1" FT CDS complement(join(AL691449.21:97309..97506, FT AL691449.21:98007..98191,AL691449.21:98562..98697, FT AL691449.21:100202..100347,AL691449.21:100773..100943, FT AL691449.21:101749..101975,AL691449.21:102268..102416, FT AL691449.21:102686..102843,AL691449.21:104299..104355, FT AL691449.21:107895..108057,AL691449.21:110685..110806, FT AL691449.21:111196..111444,AL691449.21:116262..116447, FT AL691449.21:116565..116714,AL691449.21:118274..118482, FT AL691449.21:121915..122110,AL691449.21:140073..140195, FT 9883701..9883791)) FT /gene="CLSTN1" FT /locus_tag="RP11-558F24.5-002" FT /standard_name="OTTHUMP00000001598" FT /product="calsyntenin 1" FT /protein_id="CAI16884.1" FT /translation="MLRRPAPALAPAARLLLAGLLCGGGVWAARVNKHKPWLEPTYHGI FT VTENDNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKE FT KLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATV FT IEGKQYDSILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQ FT YKLTVTAYDCGKKRATEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLET FT CDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPSPSGSLNWTMG FT LPTDNGHDSDQVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGRKKETILCSSD FT KTDMNRHHYSLYVHGCRLIFLFRQDPSEEKKYRPAEFHWKLNQVCDEEWHHYVLNVEFP FT SVTLYVDGTSHEPFSVTEDYPLHPSKIETQLVVGACWQEFSGVENDNETEPVTVASAGG FT DLHMTQFFRGNLAGLTLRSGKLADKKVIDCLYTCKEGLDLQVLEDSGRGVQIQAHPSQL FT VLTLEGEDLGELDKAMQHISYLNSRQFPTPGIRRLKITSTIKCFNEATCISVPPVDGYV FT MVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTV FT QESLVSEEIVHDLDTCEVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVD FT TMASYEEVLHLLRYRNWHARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPMEHA FT NHMAAQPQFVHPEHRSFVDLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFR FT IRAAHRRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGE FT EEDDITSAESESSEEEEGEQGDPQNATRQQQLEWDDSTLSY" FT misc_feature 9884099..9884106 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 9884167..9884207 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 9884681 FT /note="Clone_left_end: RP11-807G9" FT polyA_site complement(9908334) FT polyA_signal complement(9908349..9908354) FT mRNA join(9908376..9908524,9909427..9909532,9910044..9910212) FT /locus_tag="RP11-84A14.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG189868.1 Em:BG221378.1" FT CDS complement(join(9910776..9910834,9931245..9931335, FT 9932027..9932122)) FT /gene="CTNNBIP1" FT /locus_tag="RP11-84A14.1-001" FT /standard_name="OTTHUMP00000001722" FT /product="catenin, beta interacting protein 1" FT /note="match: proteins: Sw:Q9JJN6 Sw:Q9NSA3" FT /protein_id="CAI16886.1" FT /translation="MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYA FT GVVNSQLSQLPPHSIDQGAEDVVMAFSRSETEDRRQ" FT mRNA complement(join(9910717..9910834,9931245..9931335, FT 9932027..9932146,9937963..9938047,9938198..9938234)) FT /gene="CTNNBIP1" FT /locus_tag="RP11-84A14.1-004" FT /product="catenin, beta interacting protein 1" FT /note="match: ESTs: Em:AI765102.1" FT mRNA complement(join(9910508..9910834,9931245..9931335, FT 9932027..9932146,9937963..9938047,9953067..9953295)) FT /gene="CTNNBIP1" FT /locus_tag="RP11-84A14.1-003" FT /product="catenin, beta interacting protein 1" FT /note="match: ESTs: Em:BG743658.1 Em:BU541435.1" FT mRNA join(9961518..9961630,9962082..9962174) FT /locus_tag="RP11-84A14.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW860637.1" FT misc_feature 9970097..9970474 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(9908334..9910834,9931245..9931335, FT 9932027..9932146,9937963..9938047,9943763..9943796, FT 9970153..9970321)) FT /gene="CTNNBIP1" FT /locus_tag="RP11-84A14.1-001" FT /product="catenin, beta interacting protein 1" FT /note="match: cDNAs: Em:AB021262.1" FT /note="match: ESTs: Em:AA262975.1 Em:AA478738.1 FT Em:AI273618.1 Em:AI284169.1 Em:AI379088.1 Em:AL530989.2 FT Em:AL530990.2 Em:BF971395.1 Em:BG673980.1 Em:BG676252.1 FT Em:BG755350.1 Em:BI226022.1 Em:BI227247.1 Em:BI252220.1 FT Em:BM052920.1 Em:BM463223.1 Em:BM665429.1 Em:BM679074.1 FT Em:BM790757.1 Em:BM799933.1 Em:BM809725.1 Em:BQ183910.1 FT Em:BQ649914.1 Em:BQ653136.1 Em:BQ681227.1 Em:BQ682197.1 FT Em:BQ892669.1 Em:BQ944181.1 Em:BU149124.1 Em:BU171531.1 FT Em:BU607337.1 Em:BU631757.1 Em:BU633955.1 Em:BU634033.1 FT Em:BU742895.1 Em:BX420986.1 Em:CB242070.1 Em:CB852750.1 FT Em:CD671708.1 Em:N27968.1" FT mRNA complement(join(9910167..9910834,9931245..9931335, FT 9932027..9932146,9937963..9938047,9970153..9970394)) FT /gene="CTNNBIP1" FT /locus_tag="RP11-84A14.1-002" FT /product="catenin, beta interacting protein 1" FT /note="match: cDNAs: Em:BC014300.1" FT /note="match: ESTs: Em:AI857488.1 Em:BE798239.1 FT Em:BE899357.1 Em:BF690344.1 Em:BI489816.1 Em:BI559707.1 FT Em:BM918501.1 Em:BQ880119.1 Em:CB995652.1 Em:CD300580.1" FT misc_feature 9970175..9970292 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 9971741..9971771 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT polyA_site complement(9982171) FT polyA_signal complement(9982193..9982198) FT polyA_site complement(9988997) FT polyA_signal complement(9989010..9989015) FT mRNA complement(join(9990319..9990515,9991949..9992238)) FT /gene="LZIC" FT /locus_tag="RP11-84A14.3-002" FT /product="leucine zipper and CTNNBIP1 domain containing" FT /note="match: ESTs: Em:BE468220.1" FT mRNA complement(join(9982173..9982416,9991949..9992030, FT 9992861..9992956,9994820..9994918,9995550..9995678)) FT /gene="LZIC" FT /locus_tag="RP11-84A14.3-004" FT /product="leucine zipper and CTNNBIP1 domain containing" FT /note="match: ESTs: Em:AI377844.1" FT CDS complement(join(9990457..9990515,9991949..9992030, FT 9992861..9992956,9994820..9994918,9995550..9995685, FT 9996577..9996677)) FT /gene="LZIC" FT /locus_tag="RP11-84A14.3-001" FT /standard_name="OTTHUMP00000001733" FT /product="leucine zipper and CTNNBIP1 domain containing" FT /note="match: proteins: Tr:Q8K3C3 Tr:Q8WZA0" FT /protein_id="CAI16887.1" FT /translation="MASRGKTETSKLKQNLEEQLDRLMQQLQDLEECREELDTDEYEET FT KKETLEQLSEFNDSLKKIMSGNMTLVDELSGMQLAIQAAISQAFKTPEVIRLFAKKQPG FT QLRTRLAEMDRDLMVGKLERDLYTQQKVEILTALRKLGEKLTADDEAFLSANAGAILSQ FT FEKVSTDLGSGDKILALASFEVEKTKK" FT mRNA complement(join(9982171..9982416,9991949..9992030, FT 9992861..9992956,9994820..9994868,10002682..10002807)) FT /gene="LZIC" FT /locus_tag="RP11-84A14.3-003" FT /product="leucine zipper and CTNNBIP1 domain containing" FT /note="match: ESTs: Em:AW086019.1 Em:AW291133.1 FT Em:BF511663.1 Em:BQ018333.1" FT mRNA join(10002981..10003083,10009696..10010032) FT /locus_tag="RP11-84A14.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI244413.1 Em:BF367791.1" FT mRNA complement(join(9988997..9990515,9991949..9992030, FT 9992861..9992956,9994820..9994918,9995550..9995685, FT 9996577..9996685,10002682..10002840,10003307..10003387)) FT /gene="LZIC" FT /locus_tag="RP11-84A14.3-001" FT /product="leucine zipper and CTNNBIP1 domain containing" FT /note="match: cDNAs: Em:AB060688.1 Em:AK025913.1 FT Em:BC007240.1" FT /note="match: ESTs: Em:AA132104.1 Em:AA220235.1 FT Em:AA442917.1 Em:AA774973.1 Em:AI332597.1 Em:AI346534.1 FT Em:AI350775.1 Em:AI589613.1 Em:AI672593.1 Em:AI741164.1 FT Em:AI804235.1 Em:AI928143.1 Em:AL535447.2 Em:AL535448.2 FT Em:AW013858.1 Em:AW341079.1 Em:AW770988.1 Em:BE177251.1 FT Em:BE219717.1 Em:BF035741.1 Em:BF448463.1 Em:BG573737.1 FT Em:BG825759.1 Em:BI462375.1 Em:BI792832.1 Em:BM142131.1 FT Em:BM471662.1 Em:BM472983.1 Em:BM670960.1 Em:BM851681.1 FT Em:BQ440085.1 Em:BU186239.1 Em:BU597614.1 Em:BX451937.1 FT Em:BX451938.1 Em:BX453503.1 Em:CB126990.1 Em:CB988126.1 FT Em:CD244383.1" FT mRNA complement(join(9990311..9990515,9991949..9992030, FT 9992861..9992956,9994820..9994918,9995550..9995685, FT 9996577..9996685,10002682..10002840,10003407..10003465)) FT /gene="LZIC" FT /locus_tag="RP11-84A14.3-005" FT /product="leucine zipper and CTNNBIP1 domain containing" FT /note="match: ESTs: Em:AV733076.1 Em:BF574972.1 FT Em:BG530657.1 Em:BI464938.1 Em:BI772110.1 Em:BU949012.1 FT Em:CD687809.1 Em:CD697334.1" FT mRNA join(10003486..10003573,10032076..10032246, FT AL603962.13:4989..5172,AL603962.13:10428..10567, FT AL603962.13:10653..11163) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-002" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: ESTs: Em:AI247931.1 Em:AI800364.1 FT Em:BI858034.1 Em:BU948641.1 Em:BU948893.1" FT mRNA join(10003486..10003573,10032076..10032246, FT AL603962.13:4989..5172,AL603962.13:10428..10567, FT AL603962.13:11698..14895) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-001" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: cDNAs: Em:AF088049.1 Em:AF459819.1" FT /note="match: ESTs: Em:AA311657.1 Em:AA551523.1 FT Em:AA631395.1 Em:AA716249.1 Em:AI742166.1 Em:AW779092.1 FT Em:AW961169.1 Em:BE272001.1 Em:BF000222.1 Em:BF341797.1 FT Em:BF576168.1 Em:BF672353.1 Em:BF673919.1 Em:BF886165.1 FT Em:BG751629.1 Em:BG951144.1 Em:BI003866.1 Em:BI160399.1 FT Em:BI758308.1 Em:BI858034.1 Em:BM693812.1 Em:BM907450.1 FT Em:BQ218886.1 Em:BQ671034.1 Em:BQ948161.1 Em:BU173830.1 FT Em:BU738251.1 Em:BX118239.1 Em:BX282101.1 Em:BX363137.1 FT Em:BX370511.1 Em:CB853148.1 Em:CD701509.1 Em:W04257.1 FT Em:W72875.1 Em:Z21300.1" FT mRNA join(10003487..10003573,10032076..10032246, FT AL603962.13:4989..5172,AL603962.13:10428..10567, FT AL603962.13:11698..12277,AL603962.13:12411..13066) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-005" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: cDNAs: Em:BC014943.1" FT mRNA join(10003546..10003573,10032076..10032561) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-004" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: ESTs: Em:CD104214.1" FT CDS join(10032132..10032246,AL603962.13:4989..5172, FT AL603962.13:10428..10567,AL603962.13:10653..10696) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-002" FT /standard_name="OTTHUMP00000001732" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /protein_id="CAI16888.1" FT /translation="MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVK FT GIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQE FT KLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKDGVSLYHPGWSAVA" FT CDS join(10032132..10032246,AL603962.13:4989..5172, FT AL603962.13:10428..10567,AL603962.13:11698..12098) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-001" FT /standard_name="OTTHUMP00000001731" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: proteins: Sw:Q9HAN9" FT /protein_id="CAI16889.1" FT /translation="MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVK FT GIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQE FT KLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESF FT AVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDIS FT STKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT" FT misc_feature 10032661 FT /note="Clone_right_end: RP11-84A14" FT misc_feature 10032662..10060918 FT /note="annotated region of clone" FT mRNA join(10041110..10041228,10045194..10045559) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-003" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: ESTs: Em:AA705016.1 Em:AI392757.1 FT Em:AI657110.1 Em:AW004846.1" FT polyA_signal 10041803..10041808 FT polyA_site 10041824 FT mRNA join(10043199..10043348,10044341..10044626) FT /locus_tag="RP11-807G9.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC032483.1" FT /note="match: ESTs: Em:BI835196.1" FT polyA_signal 10044602..10044607 FT polyA_site 10044626 FT misc_feature 10055729..10055793 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 10056919 FT /note="Clone_left_end: RP11-496H15" FT mRNA join(10057264..10057389,AL590639.9:8107..8320, FT AL590639.9:8709..8887,AL590639.9:9312..9413, FT AL590639.9:16921..17159) FT /gene="RBP7" FT /locus_tag="RP11-496H15.1-002" FT /product="retinol binding protein 7, cellular" FT /note="match: cDNAs: Em:BC033883.1" FT /note="match: ESTs: Em:BM477848.1" FT mRNA join(10057274..10057389,AL590639.9:8709..8887, FT AL590639.9:9312..9413,AL590639.9:16921..17159) FT /gene="RBP7" FT /locus_tag="RP11-496H15.1-001" FT /product="retinol binding protein 7, cellular" FT /note="match: cDNAs: Em:AF399927.1 Em:AY145438.1" FT /note="match: ESTs: Em:AA484284.1 Em:AA888151.1 FT Em:AI694572.1 Em:AI733027.1 Em:AI791518.1 Em:AL603589.1 FT Em:AW448918.1 Em:AW969847.1 Em:BI835720.1 Em:BM091139.1 FT Em:BM091444.1 Em:BM142634.1 Em:BM263061.1 Em:BM955928.1 FT Em:BM973611.1" FT CDS join(10057317..10057389,AL590639.9:8709..8887, FT AL590639.9:9312..9413,AL590639.9:16921..16971) FT /gene="RBP7" FT /locus_tag="RP11-496H15.1-001" FT /standard_name="OTTHUMP00000001729" FT /product="retinol binding protein 7, cellular" FT /note="match: proteins: Sw:Q96R05" FT /protein_id="CAI16811.1" FT /translation="MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQ FT NGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKN FT RGWTHWIEGDKLHLEMFCEGQVCKQTFQRA" FT mRNA join(AL357140.33:148295..148382,AL357140.33:176885..177055, FT 10035650..10035833,10041089..10041228,10041314..10041824) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-002" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: ESTs: Em:AI247931.1 Em:AI800364.1 FT Em:BI858034.1 Em:BU948641.1 Em:BU948893.1" FT mRNA join(AL357140.33:148295..148382,AL357140.33:176885..177055, FT 10035650..10035833,10041089..10041228,10042359..10045556) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-001" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: cDNAs: Em:AF088049.1 Em:AF459819.1" FT /note="match: ESTs: Em:AA311657.1 Em:AA551523.1 FT Em:AA631395.1 Em:AA716249.1 Em:AI742166.1 Em:AW779092.1 FT Em:AW961169.1 Em:BE272001.1 Em:BF000222.1 Em:BF341797.1 FT Em:BF576168.1 Em:BF672353.1 Em:BF673919.1 Em:BF886165.1 FT Em:BG751629.1 Em:BG951144.1 Em:BI003866.1 Em:BI160399.1 FT Em:BI758308.1 Em:BI858034.1 Em:BM693812.1 Em:BM907450.1 FT Em:BQ218886.1 Em:BQ671034.1 Em:BQ948161.1 Em:BU173830.1 FT Em:BU738251.1 Em:BX118239.1 Em:BX282101.1 Em:BX363137.1 FT Em:BX370511.1 Em:CB853148.1 Em:CD701509.1 Em:W04257.1 FT Em:W72875.1 Em:Z21300.1" FT mRNA join(AL357140.33:148296..148382,AL357140.33:176885..177055, FT 10035650..10035833,10041089..10041228,10042359..10042938, FT 10043072..10043727) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-005" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: cDNAs: Em:BC014943.1" FT CDS join(AL357140.33:176941..177055,10035650..10035833, FT 10041089..10041228,10041314..10041357) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-002" FT /standard_name="OTTHUMP00000001732" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /protein_id="CAI16812.1" FT /translation="MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVK FT GIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQE FT KLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKDGVSLYHPGWSAVA" FT CDS join(AL357140.33:176941..177055,10035650..10035833, FT 10041089..10041228,10042359..10042759) FT /gene="NMNAT1" FT /locus_tag="RP11-807G9.1-001" FT /standard_name="OTTHUMP00000001731" FT /product="nicotinamide nucleotide adenylyltransferase 1" FT /note="match: proteins: Sw:Q9HAN9" FT /protein_id="CAI16813.1" FT /translation="MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVK FT GIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQE FT KLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESF FT AVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDIS FT STKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT" FT misc_feature 10060919..10154994 FT /note="annotated region of clone" FT CDS join(10067026..10067239,10067628..10067806, FT 10068231..10068332,10075840..10075890) FT /gene="RBP7" FT /locus_tag="RP11-496H15.1-002" FT /standard_name="OTTHUMP00000001730" FT /product="retinol binding protein 7, cellular" FT /protein_id="CAI14684.1" FT /translation="MESRSVAQAGVQWCDLGSLQPPPPGFKQFSYFSLQSSWDYRYVPP FT CPANFVFLVEMGFLHVDQAGLKLLTSGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSS FT LRNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKL FT HLEMFCEGQVCKQTFQRA" FT polyA_signal 10076060..10076065 FT polyA_site 10076078 FT mRNA join(AL603962.13:26603..26728,10067026..10067239, FT 10067628..10067806,10068231..10068332,10075840..10076078) FT /gene="RBP7" FT /locus_tag="RP11-496H15.1-002" FT /product="retinol binding protein 7, cellular" FT /note="match: cDNAs: Em:BC033883.1" FT /note="match: ESTs: Em:BM477848.1" FT mRNA join(AL603962.13:26613..26728,10067628..10067806, FT 10068231..10068332,10075840..10076078) FT /gene="RBP7" FT /locus_tag="RP11-496H15.1-001" FT /product="retinol binding protein 7, cellular" FT /note="match: cDNAs: Em:AF399927.1 Em:AY145438.1" FT /note="match: ESTs: Em:AA484284.1 Em:AA888151.1 FT Em:AI694572.1 Em:AI733027.1 Em:AI791518.1 Em:AL603589.1 FT Em:AW448918.1 Em:AW969847.1 Em:BI835720.1 Em:BM091139.1 FT Em:BM091444.1 Em:BM142634.1 Em:BM263061.1 Em:BM955928.1 FT Em:BM973611.1" FT CDS join(AL603962.13:26656..26728,10067628..10067806, FT 10068231..10068332,10075840..10075890) FT /gene="RBP7" FT /locus_tag="RP11-496H15.1-001" FT /standard_name="OTTHUMP00000001729" FT /product="retinol binding protein 7, cellular" FT /note="match: proteins: Sw:Q96R05" FT /protein_id="CAI14685.1" FT /translation="MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQ FT NGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKN FT RGWTHWIEGDKLHLEMFCEGQVCKQTFQRA" FT mRNA join(10092890..10093752,10132086..10132272, FT AL096841.6:2525..2660,AL096841.6:8172..8259, FT AL096841.6:10012..10156,AL096841.6:12580..12808, FT AL096841.6:24523..24664,AL096841.6:26577..26677, FT AL096841.6:29026..29140,AL096841.6:33858..33941, FT AL096841.6:36456..36512,AL096841.6:37564..37680, FT AL096841.6:37779..37877,AL096841.6:39433..39546, FT AL096841.6:42052..42250,AL096841.6:44131..44269, FT AL096841.6:52004..52103,AL096841.6:54027..54154, FT AL096841.6:56248..56346,AL096841.6:58390..58625, FT AL096841.6:65420..65546,AL096841.6:68206..68350, FT AL096841.6:75200..75334,AL096841.6:78202..78393, FT AL096841.6:85708..85882,AL096841.6:86480..86626, FT AL096841.6:86959..87431) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-002" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: cDNAs: Em:AB028839.1" FT /note="match: ESTs: Em:AW601914.1 Em:BE783057.1" FT mRNA join(10093332..10093752,10132086..10132272, FT 10132512..10133176) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-005" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: ESTs: Em:AA807126.1 Em:CB529467.1 FT Em:CD367800.1" FT mRNA join(10093654..10093752,10132086..10132272, FT AL096841.6:2525..2660,AL096841.6:8172..8259, FT AL096841.6:10012..10156,AL096841.6:12580..12808, FT AL096841.6:13261..13647,AL096841.6:24523..24664, FT AL096841.6:26577..26677,AL096841.6:29026..29140, FT AL096841.6:33858..33941,AL096841.6:36456..36512, FT AL096841.6:37564..37680,AL096841.6:37779..37877, FT AL096841.6:39433..39546,AL096841.6:42052..42250, FT AL096841.6:44131..44269,AL096841.6:52004..52103, FT AL096841.6:54027..54154,AL096841.6:56248..56346, FT AL096841.6:58390..58625,AL096841.6:65420..65546, FT AL096841.6:68206..68350,AL096841.6:75200..75334, FT AL096841.6:78202..78393,AL096841.6:85708..85882, FT AL096841.6:86480..86626,AL096841.6:86959..88303) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-001" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: cDNAs: Em:AF043117.1" FT /note="match: ESTs: Em:AA444067.1 Em:AA477607.1 FT Em:AA780338.1 Em:AA976646.1 Em:AA984076.1 Em:AA987542.1 FT Em:AI065111.1 Em:AI198846.1 Em:AI355418.1 Em:AL040012.1 FT Em:AL134861.1 Em:AL570775.2 Em:AV708628.1 Em:AW384908.1 FT Em:AW500389.1 Em:AW504934.1 Em:AW895735.1 Em:AW961092.1 FT Em:BE222225.1 Em:BE537679.1 Em:BE544212.1 Em:BE544944.1 FT Em:BE778566.1 Em:BF725413.1 Em:BF762293.1 Em:BF844127.1 FT Em:BG035765.1 Em:BG109452.1 Em:BG117824.1 Em:BG178828.1 FT Em:BG829557.1 Em:BG830850.1 Em:BI090495.1 Em:BM147555.1 FT Em:BM263697.1 Em:BM505359.1 Em:BM836929.1 Em:BM970047.1 FT Em:BM981823.1 Em:BM989708.1 Em:BQ001243.1 Em:BQ019962.1 FT Em:BQ687232.1 Em:BU182354.1 Em:BU615192.1 Em:BU624533.1 FT Em:BX327775.1 Em:BX391676.1 Em:BX491036.1 Em:CA447474.1 FT Em:CA453684.1 Em:CA941359.1 Em:CA941646.1 Em:CB119655.1 FT Em:CF145833.1 Em:W52779.1" FT CDS join(10093729..10093752,10132086..10132272, FT 10132512..10132603) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-005" FT /standard_name="OTTHUMP00000001728" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /protein_id="CAI14686.1" FT /translation="MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAAS FT APGPSQSLGLNVHNMTPATSPIGASGLGIISDDKMIKTEFGSADFMNLVDGFKIK" FT CDS join(10093729..10093752,10132086..10132272, FT AL096841.6:2525..2660,AL096841.6:8172..8259, FT AL096841.6:10012..10156,AL096841.6:12580..12808, FT AL096841.6:13261..13647,AL096841.6:24523..24664, FT AL096841.6:26577..26677,AL096841.6:29026..29140, FT AL096841.6:33858..33941,AL096841.6:36456..36512, FT AL096841.6:37564..37680,AL096841.6:37779..37877, FT AL096841.6:39433..39546,AL096841.6:42052..42250, FT AL096841.6:44131..44269,AL096841.6:52004..52103, FT AL096841.6:54027..54154,AL096841.6:56248..56346, FT AL096841.6:58390..58625,AL096841.6:65420..65546, FT AL096841.6:68206..68350,AL096841.6:75200..75334, FT AL096841.6:78202..78393,AL096841.6:85708..85882, FT AL096841.6:86480..86626,AL096841.6:86959..87020) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-001" FT /standard_name="OTTHUMP00000001726" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: proteins: Sw:O95155 Tr:O95155" FT /protein_id="CAI14688.1" FT /translation="MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAAS FT APGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQ FT SMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVC FT KIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPF FT ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPS FT FWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWA FT SSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS FT LGASGGASNWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLS FT NIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFK FT QIFIPILQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKS FT LSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLEL FT GRQELFKILHSILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVL FT QQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKF FT PTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREM FT LKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNS FT DVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYL FT VAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDK FT FTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRI FT HEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKP FT FLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCAR FT FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDY FT SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVP FT ELKEQIQAWMREKQNSDH" FT CDS join(10093729..10093752,10132086..10132272, FT AL096841.6:2525..2660,AL096841.6:8172..8259, FT AL096841.6:10012..10156,AL096841.6:12580..12808, FT AL096841.6:24523..24664,AL096841.6:26577..26677, FT AL096841.6:29026..29140,AL096841.6:33858..33941, FT AL096841.6:36456..36512,AL096841.6:37564..37680, FT AL096841.6:37779..37877,AL096841.6:39433..39546, FT AL096841.6:42052..42250,AL096841.6:44131..44269, FT AL096841.6:52004..52103,AL096841.6:54027..54154, FT AL096841.6:56248..56346,AL096841.6:58390..58625, FT AL096841.6:65420..65546,AL096841.6:68206..68350, FT AL096841.6:75200..75334,AL096841.6:78202..78393, FT AL096841.6:85708..85882,AL096841.6:86480..86626, FT AL096841.6:86959..87020) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-002" FT /standard_name="OTTHUMP00000001727" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /protein_id="CAI14687.1" FT /translation="MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAAS FT APGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQ FT SMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVC FT KIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPF FT ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGASNWD FT SYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTA FT LVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLA FT LAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQR FT LSYLGAFFSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHS FT ILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLET FT VDPTYIFHPRCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHA FT HHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKL FT VRCKACADAGLLDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPE FT FYVEDVAEFLFFIVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMT FT NPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIF FT KSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKE FT QWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLA FT AMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRS FT YSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPL FT MDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMR FT EKQNSDH" FT CDS complement(10114503..10114839) FT /pseudo FT /locus_tag="RP11-496H15.2-001" FT /product="pseudogene similar to part of ribosomal protein FT L21 (RPL21)" FT /note="match: proteins: Sw:O09167 Sw:P20280 Sw:P46778 FT Tr:Q7SZB3 Tr:Q861S4 Tr:Q862Y5 Tr:Q9CQM8" FT CDS join(10118729..10119011,10119296..10119710) FT /pseudo FT /locus_tag="RP11-496H15.3-001" FT /product="pseudogene similar to part of phosphoglycerate FT mutase" FT /note="match: proteins: Sw:O70250 Sw:P15259 Sw:P16290 FT Sw:P18669 Sw:P25113 Sw:Q8MKE8 Sw:Q8N0Y7 Sw:Q9DBJ1 Tr:Q7SYB4 FT Tr:Q7SZR4" FT mRNA join(10132130..10132272,10132512..10132556, FT 10132959..10133176) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-006" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: ESTs: Em:BE042922.1 Em:BE670441.1" FT polyA_signal 10133153..10133158 FT polyA_site 10133176 FT misc_feature 10150996 FT /note="Clone_left_end: RP4-575L21" FT misc_feature 10154995..10247416 FT /note="annotated region of clone" FT misc_feature 10155995..10156041 FT /note="Sequence from overlapping clone bA496H15 (AL590639). FT Assembly confirmed by restriction digest" FT mRNA join(10160919..10161253,10163006..10163243) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-008" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: ESTs: Em:BQ304269.1 Em:BQ304277.1" FT mRNA join(10167389..10167432,10177517..10177658, FT 10179571..10179671,10182020..10182134,10186852..10186935, FT 10189450..10189506,10190558..10190674,10190773..10190871, FT 10192427..10192538) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-007" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: ESTs: Em:BQ212984.1" FT mRNA join(10182100..10182134,10186852..10186935, FT 10189450..10189506,10190773..10190871,10192427..10192540, FT 10195046..10195244,10197125..10197263,10204998..10205097) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-011" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: ESTs: Em:BM471185.1" FT misc_feature 10186335..10186694 FT /note="Sequence from overlapping clone bA496H15 (AL590639). FT Assembly confirmed by restriction digest" FT mRNA join(AL590639.9:33971..34833,AL590639.9:73167..73353, FT 10155519..10155654,10161166..10161253,10163006..10163150, FT 10165574..10165802,10177517..10177658,10179571..10179671, FT 10182020..10182134,10186852..10186935,10189450..10189506, FT 10190558..10190674,10190773..10190871,10192427..10192540, FT 10195046..10195244,10197125..10197263,10204998..10205097, FT 10207021..10207148,10209242..10209340,10211384..10211619, FT 10218414..10218540,10221200..10221344,10228194..10228328, FT 10231196..10231387,10238702..10238876,10239474..10239620, FT 10239953..10240425) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-002" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: cDNAs: Em:AB028839.1" FT /note="match: ESTs: Em:AW601914.1 Em:BE783057.1" FT mRNA join(AL590639.9:34735..34833,AL590639.9:73167..73353, FT 10155519..10155654,10161166..10161253,10163006..10163150, FT 10165574..10165802,10166255..10166641,10177517..10177658, FT 10179571..10179671,10182020..10182134,10186852..10186935, FT 10189450..10189506,10190558..10190674,10190773..10190871, FT 10192427..10192540,10195046..10195244,10197125..10197263, FT 10204998..10205097,10207021..10207148,10209242..10209340, FT 10211384..10211619,10218414..10218540,10221200..10221344, FT 10228194..10228328,10231196..10231387,10238702..10238876, FT 10239474..10239620,10239953..10241297) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-001" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: cDNAs: Em:AF043117.1" FT /note="match: ESTs: Em:AA444067.1 Em:AA477607.1 FT Em:AA780338.1 Em:AA976646.1 Em:AA984076.1 Em:AA987542.1 FT Em:AI065111.1 Em:AI198846.1 Em:AI355418.1 Em:AL040012.1 FT Em:AL134861.1 Em:AL570775.2 Em:AV708628.1 Em:AW384908.1 FT Em:AW500389.1 Em:AW504934.1 Em:AW895735.1 Em:AW961092.1 FT Em:BE222225.1 Em:BE537679.1 Em:BE544212.1 Em:BE544944.1 FT Em:BE778566.1 Em:BF725413.1 Em:BF762293.1 Em:BF844127.1 FT Em:BG035765.1 Em:BG109452.1 Em:BG117824.1 Em:BG178828.1 FT Em:BG829557.1 Em:BG830850.1 Em:BI090495.1 Em:BM147555.1 FT Em:BM263697.1 Em:BM505359.1 Em:BM836929.1 Em:BM970047.1 FT Em:BM981823.1 Em:BM989708.1 Em:BQ001243.1 Em:BQ019962.1 FT Em:BQ687232.1 Em:BU182354.1 Em:BU615192.1 Em:BU624533.1 FT Em:BX327775.1 Em:BX391676.1 Em:BX491036.1 Em:CA447474.1 FT Em:CA453684.1 Em:CA941359.1 Em:CA941646.1 Em:CB119655.1 FT Em:CF145833.1 Em:W52779.1" FT CDS join(AL590639.9:34810..34833,AL590639.9:73167..73353, FT 10155519..10155654,10161166..10161253,10163006..10163150, FT 10165574..10165802,10166255..10166641,10177517..10177658, FT 10179571..10179671,10182020..10182134,10186852..10186935, FT 10189450..10189506,10190558..10190674,10190773..10190871, FT 10192427..10192540,10195046..10195244,10197125..10197263, FT 10204998..10205097,10207021..10207148,10209242..10209340, FT 10211384..10211619,10218414..10218540,10221200..10221344, FT 10228194..10228328,10231196..10231387,10238702..10238876, FT 10239474..10239620,10239953..10240014) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-001" FT /standard_name="OTTHUMP00000001726" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: proteins: Sw:O95155 Tr:O95155" FT /protein_id="CAI21859.1" FT /translation="MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAAS FT APGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQ FT SMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVC FT KIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPF FT ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLYESSPAPTPS FT FWSSVPVMGPSLASPSRAASQLAVPSTPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWA FT SSGVSILSSSPSPPALASSPQAVPASSSRQRPSSTGPPLPPASPSATSRRPSSLRISPS FT LGASGGASNWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLS FT NIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFK FT QIFIPILQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKS FT LSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLEL FT GRQELFKILHSILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVL FT QQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKF FT PTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREM FT LKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNS FT DVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYL FT VAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDK FT FTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRI FT HEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKP FT FLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCAR FT FAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDY FT SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVP FT ELKEQIQAWMREKQNSDH" FT CDS join(AL590639.9:34810..34833,AL590639.9:73167..73353, FT 10155519..10155654,10161166..10161253,10163006..10163150, FT 10165574..10165802,10177517..10177658,10179571..10179671, FT 10182020..10182134,10186852..10186935,10189450..10189506, FT 10190558..10190674,10190773..10190871,10192427..10192540, FT 10195046..10195244,10197125..10197263,10204998..10205097, FT 10207021..10207148,10209242..10209340,10211384..10211619, FT 10218414..10218540,10221200..10221344,10228194..10228328, FT 10231196..10231387,10238702..10238876,10239474..10239620, FT 10239953..10240014) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-002" FT /standard_name="OTTHUMP00000001727" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /protein_id="CAI21860.1" FT /translation="MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAAS FT APGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQ FT SMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVC FT KIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPF FT ASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGASNWD FT SYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTA FT LVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLA FT LAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQR FT LSYLGAFFSFSVFAEDDVKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHS FT ILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLET FT VDPTYIFHPRCRITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHA FT HHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKL FT VRCKACADAGLLDESFLRRCLNFYGLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPE FT FYVEDVAEFLFFIVQYSPQALYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMT FT NPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIF FT KSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKE FT QWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLA FT AMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRS FT YSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPL FT MDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMR FT EKQNSDH" FT mRNA join(10188397..10189506,10190558..10190674, FT 10190773..10190871,10192427..10192540,10195046..10195244, FT 10204998..10205657) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-003" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: cDNAs: Em:AK023654.1" FT mRNA join(10218412..10218540,10221200..10221344, FT 10226302..10226400,10228194..10228328,10231196..10231247) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-009" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: ESTs: Em:CB157174.1" FT mRNA join(10231014..10231387,10238702..10238876, FT 10239474..10239620,10239953..10240074) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-004" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: cDNAs: Em:AF091093.1" FT /note="match: ESTs: Em:H11311.1 Em:H18161.1 Em:H20921.1 FT Em:H52762.1" FT misc_feature 10236013 FT /note="Clone_left_end: RP11-420G9" FT misc_feature 10237181 FT /note="Clone_right_end: RP11-496H15" FT mRNA join(10239074..10239225,10239474..10239620, FT 10239953..10240008) FT /gene="UBE4B" FT /locus_tag="RP4-575L21.1-010" FT /product="ubiquitination factor E4B (UFD2 homolog, yeast)" FT /note="match: ESTs: Em:BF056340.1" FT polyA_signal 10241269..10241274 FT polyA_site 10241297 FT misc_feature 10245416 FT /note="Clone_right_end: RP4-575L21" FT misc_feature 10247417..10417028 FT /note="annotated region of clone" FT mRNA join(10270863..10270936,10292308..10292492, FT 10316305..10316381,10318551..10318730,10321963..10322028, FT 10327438..10327616,10328210..10328321,10331560..10331637, FT 10332299..10332364,10335486..10335561,10336379..10336457, FT 10338044..10338186,10342458..10342591,10351140..10351219, FT 10352105..10352180,10355144..10355223,10355718..10355824, FT 10356640..10356723,10356955..10357135,10357232..10357304, FT 10380101..10380194,10381767..10381915,10383942..10384120, FT 10384816..10384953,10386169..10386417,10394578..10394696, FT 10396715..10396800,10397132..10397261,10397429..10397591, FT 10399827..10399917,10402108..10402226,10403290..10403345, FT 10405903..10406011,10407819..10407885,10408707..10408791, FT 10412689..10412794,AL139424.21:5959..6073, FT AL139424.21:6722..6855,AL139424.21:8313..8374, FT AL139424.21:10130..10275,AL139424.21:10439..10678, FT AL139424.21:13497..13568,AL139424.21:16171..16292, FT AL139424.21:19346..19495,AL139424.21:19884..20076, FT AL139424.21:20285..20403,AL139424.21:21575..22967) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-002" FT /product="kinesin family member 1B" FT /note="match: cDNAs: Em:AF257176.1" FT mRNA join(10270863..10270936,10292308..10292492, FT 10316305..10316381,10318551..10318730,10321963..10322028, FT 10327438..10327616,10328210..10328321,10331560..10331637, FT 10332299..10332364,10335486..10335561,10336379..10336457, FT 10338044..10338186,10342458..10342591,10351140..10351219, FT 10352105..10352180,10355144..10355223,10355718..10355824, FT 10356640..10356723,10356955..10357135,10357232..10357304, FT 10363221..10368655) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-003" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:AL135264.1 Em:AU131505.1 FT Em:BF338098.1 Em:BG258423.1 Em:BM460386.1 Em:CD517715.1 FT Em:CF121324.1" FT /note="match: cDNAs: Em:AY139835.1" FT mRNA join(10271674..10271796,10292308..10292492, FT 10316305..10316381,10318551..10318730,10321963..10322028, FT 10327438..10327616,10328210..10328321,10331560..10331637, FT 10332299..10332364,10333072..10333089,10335486..10335561, FT 10336379..10336457,10338044..10338186,10339155..10339196, FT 10342380..10342591,10351140..10351219,10352105..10352180, FT 10355144..10355223,10355718..10355824,10356640..10356723, FT 10356955..10357135,10357232..10357304,10380101..10380194, FT 10381767..10381915,10383942..10384120,10384816..10384953, FT 10386169..10386417,10394578..10394696,10396715..10396800, FT 10397132..10397261,10397429..10397591,10399827..10399917, FT 10402108..10402226,10403290..10403345,10405903..10406011, FT 10407819..10407885,10408707..10408791,10412689..10412794, FT AL139424.21:5959..6073,AL139424.21:6722..6855, FT AL139424.21:8313..8374,AL139424.21:10130..10275, FT AL139424.21:10439..10678,AL139424.21:13497..13568, FT AL139424.21:16171..16292,AL139424.21:19346..19495, FT AL139424.21:19884..20076,AL139424.21:20285..20403, FT AL139424.21:21575..26633) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-001" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:AI082256.1 Em:BG702590.1 FT Em:BI601300.1 Em:BM716071.1 Em:BQ427458.1 Em:BQ772488.1" FT /note="match: cDNAs: Em:AB011163.2" FT mRNA join(10290822..10291055,10292308..10292492, FT 10316305..10316381,10318551..10318730,10321963..10322028, FT 10327438..10327616,10328210..10328321,10331560..10331637, FT 10332299..10332364,10335486..10335561,10336379..10336457, FT 10338044..10338186,10342458..10342591,10351140..10351219, FT 10352105..10352180,10355144..10355223,10355718..10355824, FT 10356640..10356723,10356955..10357135,10357232..10357304, FT 10363221..10366815) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-004" FT /product="kinesin family member 1B" FT /note="match: cDNAs: Em:AB040881.2 Em:AY043362.1" FT mRNA join(10292308..10292492,10316305..10316381, FT 10318551..10318730,10321963..10322028,10327438..10327616, FT 10328210..10328321,10331560..10331637,10332299..10332364, FT 10333072..10333089,10335486..10335561,10336379..10336457, FT 10338044..10338186,10339155..10339196,10342380..10342591, FT 10351140..10351219,10352105..10352180,10355144..10355223, FT 10355718..10355824,10356640..10356723,10356955..10357135, FT 10357232..10357304,10380101..10380194,10381767..10381915, FT 10383942..10384120,10384816..10384953,10386169..10386417, FT 10394578..10394696,10396715..10396800,10397132..10397261, FT 10397429..10397591,10399827..10399917,10402108..10402226, FT 10403290..10403345,10405903..10406011,10407819..10407885, FT 10408707..10408791,10412689..10412794, FT AL139424.21:5959..6073,AL139424.21:6722..6855, FT AL139424.21:8313..8374,AL139424.21:10130..10275, FT AL139424.21:10439..10678,AL139424.21:13497..13568, FT AL139424.21:16171..16292,AL139424.21:19346..19495, FT AL139424.21:19884..20076,AL139424.21:20285..20403, FT AL139424.21:23369..26627) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-005" FT /product="kinesin family member 1B" FT /note="match: cDNAs: Em:AB017133.1" FT CDS join(10292387..10292492,10316305..10316381, FT 10318551..10318730,10321963..10322028,10327438..10327616, FT 10328210..10328321,10331560..10331637,10332299..10332364, FT 10333072..10333089,10335486..10335561,10336379..10336457, FT 10338044..10338186,10339155..10339196,10342380..10342591, FT 10351140..10351219,10352105..10352180,10355144..10355223, FT 10355718..10355824,10356640..10356723,10356955..10357135, FT 10357232..10357304,10380101..10380194,10381767..10381915, FT 10383942..10384120,10384816..10384953,10386169..10386417, FT 10394578..10394696,10396715..10396800,10397132..10397261, FT 10397429..10397591,10399827..10399917,10402108..10402226, FT 10403290..10403345,10405903..10406011,10407819..10407885, FT 10408707..10408791,10412689..10412794, FT AL139424.21:5959..6073,AL139424.21:6722..6855, FT AL139424.21:8313..8374,AL139424.21:10130..10275, FT AL139424.21:10439..10678,AL139424.21:13497..13568, FT AL139424.21:16171..16292,AL139424.21:19346..19495, FT AL139424.21:19884..20076,AL139424.21:20285..20403, FT AL139424.21:21575..21617) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-001" FT /standard_name="OTTHUMP00000001772" FT /product="kinesin family member 1B" FT /note="match: proteins: Tr:O60333" FT /protein_id="CAI95219.1" FT /translation="MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKE FT APKSFSFDYSYWSHTSPEDPCFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS FT YTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNK FT GNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFT FT IVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV FT ISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDE FT TLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDIDPLID FT DYSGSGSKYLKDFQNNKHRYLLASENQRPGHFSTASMGSLTSSPSSCSLSSQVGLTSVT FT SIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIR FT EDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHI FT KEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVSQPVQLRSGNRIIMGKNHVFRFN FT HPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKRLQEMEILYKKEKE FT EADLLLEQQRLDYESKLQALQKQVETRSLAAETTEEEEEEEEVPWTQHEFELAQWAFRK FT WKSHQFTSLRDLLWGNAVYLKEANAISVELKKKVQFQFVLLTDTLYSPLPPELLPTEME FT KTHEDRPFPRTVVAVEVQDLKNGATHYWSLEKLKQRLDLMREMYDRAGEMASSAQDESE FT TTVTGSDPFYDRFHWFKLVGSSPIFHGCVNERLADRTPSPTFSTADSDITELADEQQDE FT MEDFDDEAFVDDAGSDAGTEEGSDLFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPL FT IHRVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNEYFNQSDFSS FT VAMTRSGLSLEELRIVEGQGQSSEVITPPEEISRINDLDLKSSTLLDGKMVMEGFSEEI FT GNHLKLGSAFTFRVTVLQASGILPEYADIFCQFNFLHRHDEAFSTEPLKNNGRGSPLAF FT YHVQNIAVEITESFVDYIKTKPIVFEVFGHYQQHPLHLQGQELNSPPQPCRRFFPPPMP FT LSKPVPATKLNTMSKTSLGQSMSKYDLLVWFEISELEPTGEYIPAVVDHTAGLPCQGTF FT LLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRNKPEVDEAAVDAILSLNIISAKY FT LKSSHNSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQPAVITK FT DVCMVFYSRDAKISPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCKMSDTGSPGMQRRR FT RKILDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKLELLHEVEKTRHFLLLRERLGD FT SIPKSLSDSLSPSLSSGTLSTSTSISSQISTTTFESAITPSESSGYDSGDIESLVDREK FT ELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSESSFSSATLTPSSTCPSL FT VDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARAGKNEFLNLVPDIEEIR FT PSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLSTAQVEYSE FT DQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRRCPSQSK FT Y" FT CDS join(10292387..10292492,10316305..10316381, FT 10318551..10318730,10321963..10322028,10327438..10327616, FT 10328210..10328321,10331560..10331637,10332299..10332364, FT 10335486..10335561,10336379..10336457,10338044..10338186, FT 10342458..10342591,10351140..10351219,10352105..10352180, FT 10355144..10355223,10355718..10355824,10356640..10356723, FT 10356955..10357135,10357232..10357304,10380101..10380194, FT 10381767..10381915,10383942..10384120,10384816..10384953, FT 10386169..10386417,10394578..10394696,10396715..10396800, FT 10397132..10397261,10397429..10397591,10399827..10399917, FT 10402108..10402226,10403290..10403345,10405903..10406011, FT 10407819..10407885,10408707..10408791,10412689..10412794, FT AL139424.21:5959..6073,AL139424.21:6722..6855, FT AL139424.21:8313..8374,AL139424.21:10130..10275, FT AL139424.21:10439..10678,AL139424.21:13497..13568, FT AL139424.21:16171..16292,AL139424.21:19346..19495, FT AL139424.21:19884..20076,AL139424.21:20285..20403, FT AL139424.21:21575..21617) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-002" FT /standard_name="OTTHUMP00000001773" FT /product="kinesin family member 1B" FT /note="match: proteins: Tr:O60333" FT /protein_id="CAI95220.1" FT /translation="MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKE FT APKSFSFDYSYWSHTSPEDPCFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS FT YTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNK FT GNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFT FT IVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV FT ISALAEVSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLR FT YADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDTSMGSLTSSPSS FT CSLSSQVGLTSVTSIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRME FT REALLAEMGVAIREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADA FT ERRQDIVLSGAHIKEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVSQPVQLRSGN FT RIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKR FT LQEMEILYKKEKEEADLLLEQQRLDYESKLQALQKQVETRSLAAETTEEEEEEEEVPWT FT QHEFELAQWAFRKWKSHQFTSLRDLLWGNAVYLKEANAISVELKKKVQFQFVLLTDTLY FT SPLPPELLPTEMEKTHEDRPFPRTVVAVEVQDLKNGATHYWSLEKLKQRLDLMREMYDR FT AGEMASSAQDESETTVTGSDPFYDRFHWFKLVGSSPIFHGCVNERLADRTPSPTFSTAD FT SDITELADEQQDEMEDFDDEAFVDDAGSDAGTEEGSDLFSDGHDPFYDRSPWFILVGRA FT FVYLSNLLYPVPLIHRVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKIS FT FDNEYFNQSDFSSVAMTRSGLSLEELRIVEGQGQSSEVITPPEEISRINDLDLKSSTLL FT DGKMVMEGFSEEIGNHLKLGSAFTFRVTVLQASGILPEYADIFCQFNFLHRHDEAFSTE FT PLKNNGRGSPLAFYHVQNIAVEITESFVDYIKTKPIVFEVFGHYQQHPLHLQGQELNSP FT PQPCRRFFPPPMPLSKPVPATKLNTMSKTSLGQSMSKYDLLVWFEISELEPTGEYIPAV FT VDHTAGLPCQGTFLLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRNKPEVDEAAV FT DAILSLNIISAKYLKSSHNSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYL FT ELDHCIQPAVITKDVCMVFYSRDAKISPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCK FT MSDTGSPGMQRRRRKILDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKLELLHEVEK FT TRHFLLLRERLGDSIPKSLSDSLSPSLSSGTLSTSTSISSQISTTTFESAITPSESSGY FT DSGDIESLVDREKELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSESSFS FT SATLTPSSTCPSLVDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARAGKN FT EFLNLVPDIEEIRPSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERG FT IINLSTAQVEYSEDQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTI FT RSKLSRRCPSQSKY" FT CDS join(10292387..10292492,10316305..10316381, FT 10318551..10318730,10321963..10322028,10327438..10327616, FT 10328210..10328321,10331560..10331637,10332299..10332364, FT 10333072..10333089,10335486..10335561,10336379..10336457, FT 10338044..10338186,10339155..10339196,10342380..10342591, FT 10351140..10351219,10352105..10352180,10355144..10355223, FT 10355718..10355824,10356640..10356723,10356955..10357135, FT 10357232..10357304,10380101..10380194,10381767..10381915, FT 10383942..10384120,10384816..10384953,10386169..10386417, FT 10394578..10394696,10396715..10396800,10397132..10397261, FT 10397429..10397591,10399827..10399917,10402108..10402226, FT 10403290..10403345,10405903..10406011,10407819..10407885, FT 10408707..10408791,10412689..10412794, FT AL139424.21:5959..6073,AL139424.21:6722..6855, FT AL139424.21:8313..8374,AL139424.21:10130..10275, FT AL139424.21:10439..10678,AL139424.21:13497..13568, FT AL139424.21:16171..16292,AL139424.21:19346..19495, FT AL139424.21:19884..20076,AL139424.21:20285..20403, FT AL139424.21:23369..23432) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-005" FT /standard_name="OTTHUMP00000001776" FT /product="kinesin family member 1B" FT /note="match: proteins: Sw:O60333" FT /protein_id="CAI95221.1" FT /translation="MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKE FT APKSFSFDYSYWSHTSPEDPCFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS FT YTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNK FT GNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFT FT IVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV FT ISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDE FT TLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDIDPLID FT DYSGSGSKYLKDFQNNKHRYLLASENQRPGHFSTASMGSLTSSPSSCSLSSQVGLTSVT FT SIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIR FT EDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHI FT KEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVSQPVQLRSGNRIIMGKNHVFRFN FT HPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKRLQEMEILYKKEKE FT EADLLLEQQRLDYESKLQALQKQVETRSLAAETTEEEEEEEEVPWTQHEFELAQWAFRK FT WKSHQFTSLRDLLWGNAVYLKEANAISVELKKKVQFQFVLLTDTLYSPLPPELLPTEME FT KTHEDRPFPRTVVAVEVQDLKNGATHYWSLEKLKQRLDLMREMYDRAGEMASSAQDESE FT TTVTGSDPFYDRFHWFKLVGSSPIFHGCVNERLADRTPSPTFSTADSDITELADEQQDE FT MEDFDDEAFVDDAGSDAGTEEGSDLFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPL FT IHRVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNEYFNQSDFSS FT VAMTRSGLSLEELRIVEGQGQSSEVITPPEEISRINDLDLKSSTLLDGKMVMEGFSEEI FT GNHLKLGSAFTFRVTVLQASGILPEYADIFCQFNFLHRHDEAFSTEPLKNNGRGSPLAF FT YHVQNIAVEITESFVDYIKTKPIVFEVFGHYQQHPLHLQGQELNSPPQPCRRFFPPPMP FT LSKPVPATKLNTMSKTSLGQSMSKYDLLVWFEISELEPTGEYIPAVVDHTAGLPCQGTF FT LLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRNKPEVDEAAVDAILSLNIISAKY FT LKSSHNSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQPAVITK FT DVCMVFYSRDAKISPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCKMSDTGSPGMQRRR FT RKILDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKLELLHEVEKTRHFLLLRERLGD FT SIPKSLSDSLSPSLSSGTLSTSTSISSQISTTTFESAITPSESSGYDSGDIESLVDREK FT ELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSESSFSSATLTPSSTCPSL FT VDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARAGKNEFLNLVPDIEEIR FT PSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLSTAQVEYSE FT DQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRPGHLASEIIRED FT KSVSFSCQ" FT CDS join(10292387..10292492,10316305..10316381, FT 10318551..10318730,10321963..10322028,10327438..10327616, FT 10328210..10328321,10331560..10331637,10332299..10332364, FT 10335486..10335561,10336379..10336457,10338044..10338186, FT 10342458..10342591,10351140..10351219,10352105..10352180, FT 10355144..10355223,10355718..10355824,10356640..10356723, FT 10356955..10357135,10357232..10357304,10363221..10364705) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-003" FT /standard_name="OTTHUMP00000001774" FT /product="kinesin family member 1B" FT /note="match: proteins: Tr:O60333" FT /protein_id="CAI95222.1" FT /translation="MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKE FT APKSFSFDYSYWSHTSPEDPCFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS FT YTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNK FT GNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFT FT IVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV FT ISALAEVSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLR FT YADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDTSMGSLTSSPSS FT CSLSSQVGLTSVTSIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRME FT REALLAEMGVAIREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADA FT ERRQDIVLSGAHIKEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVSQPVQLRSGN FT RIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKR FT LQEMEILYKKEKEEADLLLEQQRLDADSDSGDDSDKRSCEESWKLITSLREKLPPSKLQ FT TIVKKCGLPSSGKKREPIKMYQIPQRRRLSKDSKWVTISDLKIQAVKEICYEVALNDFR FT HSRQEIEALAIVKMKELCAMYGKKDPNERDSWRAVARDVWDTVGVGDEKIEDVMATGKG FT STDVDDLKVHIDKLEDILQEVKKQNNMKDEEIKVLRNKMLKMEKVLPLIGSQEQKSPGS FT HKAKEPVGAGVSSTSENNVSKGDNGELAKEERVSQLMNGDPAFRRGRLRWMRQEQIRFK FT NLQQQEITKQLRRQNVPHRFIPPENRKPRFPFKSNPKHRNSWSPGTHIIITEDEVIELR FT IPKDDEARKGNKEESQEKGGKGAFKDPQFPWGSQGMRSQDHIQVSKQHINNQQQPPQLR FT WRSNSLNNGQPKSTRCQASASAESLNSHSGHPTADVQTFQAKRHIHQHRQSYCNYNTGG FT QLEGNAATSYQKQTDKPSHCSQFVTPPRMRRQFSAPNLKAGRETTV" FT misc_feature 10337858 FT /note="Clone_left_end: RP4-736L20" FT mRNA join(10338616..10339196,10342380..10342441) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-006" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:BX507709.1" FT mRNA join(10342508..10342591,10351140..10351219, FT 10352105..10352392) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-007" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:AA058693.1" FT polyA_signal 10368615..10368620 FT polyA_site 10368655 FT mRNA join(10404833..10404975,10405903..10406011, FT 10407819..10407885,10408707..10408791,10412689..10412794, FT AL139424.21:5959..6073,AL139424.21:6722..6855) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-008" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:BI829019.1" FT mRNA join(10405679..10406011,10407819..10407885, FT 10408707..10408791,10412689..10412794, FT AL139424.21:5959..6073,AL139424.21:6722..6854) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-009" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:CD244458.1" FT misc_feature 10415028 FT /note="Clone_right_end: RP11-420G9" FT misc_feature 10417029..10499749 FT /note="annotated region of clone" FT misc_feature 10424556..10424723 FT /note="Sequence from clone PCR only" FT mRNA join(10425224..10425706,10428525..10428560) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-010" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:BF898190.1" FT misc_feature 10430712..10430772 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(AL358013.19:25447..25520,AL358013.19:46892..47076, FT AL358013.19:70889..70965,AL358013.19:73135..73314, FT AL358013.19:76547..76612,AL358013.19:82022..82200, FT AL358013.19:82794..82905,AL358013.19:86144..86221, FT AL358013.19:86883..86948,AL358013.19:90070..90145, FT AL358013.19:90963..91041,AL358013.19:92628..92770, FT AL358013.19:97042..97175,AL358013.19:105724..105803, FT AL358013.19:106689..106764,AL358013.19:109728..109807, FT AL358013.19:110302..110408,AL358013.19:111224..111307, FT AL358013.19:111539..111719,AL358013.19:111816..111888, FT AL358013.19:134685..134778,AL358013.19:136351..136499, FT AL358013.19:138526..138704,AL358013.19:139400..139537, FT AL358013.19:140753..141001,AL358013.19:149162..149280, FT AL358013.19:151299..151384,AL358013.19:151716..151845, FT AL358013.19:152013..152175,AL358013.19:154411..154501, FT AL358013.19:156692..156810,AL358013.19:157874..157929, FT AL358013.19:160487..160595,AL358013.19:162403..162469, FT AL358013.19:163291..163375,AL358013.19:167273..167378, FT 10420987..10421101,10421750..10421883,10423341..10423402, FT 10425158..10425303,10425467..10425706,10428525..10428596, FT 10431199..10431320,10434374..10434523,10434912..10435104, FT 10435313..10435431,10436603..10437995) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-002" FT /product="kinesin family member 1B" FT /note="match: cDNAs: Em:AF257176.1" FT mRNA join(AL358013.19:26258..26380,AL358013.19:46892..47076, FT AL358013.19:70889..70965,AL358013.19:73135..73314, FT AL358013.19:76547..76612,AL358013.19:82022..82200, FT AL358013.19:82794..82905,AL358013.19:86144..86221, FT AL358013.19:86883..86948,AL358013.19:87656..87673, FT AL358013.19:90070..90145,AL358013.19:90963..91041, FT AL358013.19:92628..92770,AL358013.19:93739..93780, FT AL358013.19:96964..97175,AL358013.19:105724..105803, FT AL358013.19:106689..106764,AL358013.19:109728..109807, FT AL358013.19:110302..110408,AL358013.19:111224..111307, FT AL358013.19:111539..111719,AL358013.19:111816..111888, FT AL358013.19:134685..134778,AL358013.19:136351..136499, FT AL358013.19:138526..138704,AL358013.19:139400..139537, FT AL358013.19:140753..141001,AL358013.19:149162..149280, FT AL358013.19:151299..151384,AL358013.19:151716..151845, FT AL358013.19:152013..152175,AL358013.19:154411..154501, FT AL358013.19:156692..156810,AL358013.19:157874..157929, FT AL358013.19:160487..160595,AL358013.19:162403..162469, FT AL358013.19:163291..163375,AL358013.19:167273..167378, FT 10420987..10421101,10421750..10421883,10423341..10423402, FT 10425158..10425303,10425467..10425706,10428525..10428596, FT 10431199..10431320,10434374..10434523,10434912..10435104, FT 10435313..10435431,10436603..10441661) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-001" FT /product="kinesin family member 1B" FT /note="match: cDNAs: Em:AB011163.2" FT /note="match: ESTs: Em:AI082256.1 Em:BG702590.1 FT Em:BI601300.1 Em:BM716071.1 Em:BQ427458.1 Em:BQ772488.1" FT polyA_signal 10441635..10441640 FT polyA_site 10441661 FT mRNA join(10458649..10458808,10459686..10459761, FT 10460450..10460629,10463128..10463193,10464218..10464336, FT 10468128..10468197,10471475..10471609) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-002" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:BM452552.1" FT mRNA join(10459101..10459182,10459686..10460065) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-004" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:AA902304.1 Em:AI650575.1" FT mRNA join(10459101..10459182,10459686..10459748, FT 10471495..10471609,10473119..10473308,10477044..10477089) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-003" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:CD705637.1" FT mRNA join(10459130..10459182,10459686..10459761, FT 10460433..10460629,10463128..10463193,10464218..10464333) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-005" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:AW732320.1" FT mRNA join(10459137..10459182,10459686..10459761, FT 10460450..10460629,10463128..10463193,10464218..10464336, FT 10468128..10468197,10471475..10471609,10473119..10473308, FT 10477044..10477174,10477433..10477566,10478883..10478982, FT 10479474..10479596,10479687..10480201) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-001" FT /product="phosphogluconate dehydrogenase" FT /note="match: cDNAs: Em:BC000368.1" FT mRNA join(10459169..10459182,10459686..10459761, FT 10471475..10471609,10473119..10473308,10477044..10477174, FT 10477433..10477566) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-007" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:BI870041.1" FT CDS join(10459175..10459182,10459686..10459761, FT 10460450..10460629,10463128..10463193,10464218..10464336, FT 10468128..10468197,10471475..10471609,10473119..10473308, FT 10477044..10477174,10477433..10477566,10478883..10478982, FT 10479474..10479596,10479687..10479806) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-001" FT /standard_name="OTTHUMP00000001897" FT /product="phosphogluconate dehydrogenase" FT /note="match: proteins: Sw:P00349 Sw:P41570 Sw:P78812 FT Sw:Q9DCD0 Tr:Q7TP11 Tr:Q803T9 Tr:Q91V28 Tr:Q91YT9" FT /protein_id="CAI95751.1" FT /translation="MAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN FT EAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNS FT EYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQGIAAK FT VGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFED FT WNKTELDSFLIEITANILKFQDTDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLI FT GEAVFARCLSSLKDERIQASKKLKGPQKFQFDGDKKSFLEDIRKALYASKIISYAQGFM FT LLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAV FT ENCQDSWRRAVSTGVQAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELL FT AKPGQFIHTNWTGHGGTVSSSSYNA" FT mRNA join(10459555..10459761,10460450..10460629, FT 10463128..10463193,10464218..10464336,10468128..10468197) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-006" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:BQ051203.1 Em:CD695997.1" FT mRNA join(10459689..10459761,10460450..10460629, FT 10464218..10464336,10468128..10468197,10471475..10471609, FT 10473119..10473308) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-008" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:BF984770.1" FT mRNA join(AL358013.19:46892..47076,AL358013.19:70889..70965, FT AL358013.19:73135..73314,AL358013.19:76547..76612, FT AL358013.19:82022..82200,AL358013.19:82794..82905, FT AL358013.19:86144..86221,AL358013.19:86883..86948, FT AL358013.19:87656..87673,AL358013.19:90070..90145, FT AL358013.19:90963..91041,AL358013.19:92628..92770, FT AL358013.19:93739..93780,AL358013.19:96964..97175, FT AL358013.19:105724..105803,AL358013.19:106689..106764, FT AL358013.19:109728..109807,AL358013.19:110302..110408, FT AL358013.19:111224..111307,AL358013.19:111539..111719, FT AL358013.19:111816..111888,AL358013.19:134685..134778, FT AL358013.19:136351..136499,AL358013.19:138526..138704, FT AL358013.19:139400..139537,AL358013.19:140753..141001, FT AL358013.19:149162..149280,AL358013.19:151299..151384, FT AL358013.19:151716..151845,AL358013.19:152013..152175, FT AL358013.19:154411..154501,AL358013.19:156692..156810, FT AL358013.19:157874..157929,AL358013.19:160487..160595, FT AL358013.19:162403..162469,AL358013.19:163291..163375, FT AL358013.19:167273..167378,10420987..10421101, FT 10421750..10421883,10423341..10423402,10425158..10425303, FT 10425467..10425706,10428525..10428596,10431199..10431320, FT 10434374..10434523,10434912..10435104,10435313..10435431, FT 10438397..10441655) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-005" FT /product="kinesin family member 1B" FT /note="match: cDNAs: Em:AB017133.1" FT CDS join(AL358013.19:46971..47076,AL358013.19:70889..70965, FT AL358013.19:73135..73314,AL358013.19:76547..76612, FT AL358013.19:82022..82200,AL358013.19:82794..82905, FT AL358013.19:86144..86221,AL358013.19:86883..86948, FT AL358013.19:87656..87673,AL358013.19:90070..90145, FT AL358013.19:90963..91041,AL358013.19:92628..92770, FT AL358013.19:93739..93780,AL358013.19:96964..97175, FT AL358013.19:105724..105803,AL358013.19:106689..106764, FT AL358013.19:109728..109807,AL358013.19:110302..110408, FT AL358013.19:111224..111307,AL358013.19:111539..111719, FT AL358013.19:111816..111888,AL358013.19:134685..134778, FT AL358013.19:136351..136499,AL358013.19:138526..138704, FT AL358013.19:139400..139537,AL358013.19:140753..141001, FT AL358013.19:149162..149280,AL358013.19:151299..151384, FT AL358013.19:151716..151845,AL358013.19:152013..152175, FT AL358013.19:154411..154501,AL358013.19:156692..156810, FT AL358013.19:157874..157929,AL358013.19:160487..160595, FT AL358013.19:162403..162469,AL358013.19:163291..163375, FT AL358013.19:167273..167378,10420987..10421101, FT 10421750..10421883,10423341..10423402,10425158..10425303, FT 10425467..10425706,10428525..10428596,10431199..10431320, FT 10434374..10434523,10434912..10435104,10435313..10435431, FT 10436603..10436645) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-001" FT /standard_name="OTTHUMP00000001772" FT /product="kinesin family member 1B" FT /note="match: proteins: Tr:O60333" FT /protein_id="CAI95753.1" FT /translation="MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKE FT APKSFSFDYSYWSHTSPEDPCFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS FT YTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNK FT GNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFT FT IVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV FT ISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDE FT TLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDIDPLID FT DYSGSGSKYLKDFQNNKHRYLLASENQRPGHFSTASMGSLTSSPSSCSLSSQVGLTSVT FT SIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIR FT EDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHI FT KEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVSQPVQLRSGNRIIMGKNHVFRFN FT HPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKRLQEMEILYKKEKE FT EADLLLEQQRLDYESKLQALQKQVETRSLAAETTEEEEEEEEVPWTQHEFELAQWAFRK FT WKSHQFTSLRDLLWGNAVYLKEANAISVELKKKVQFQFVLLTDTLYSPLPPELLPTEME FT KTHEDRPFPRTVVAVEVQDLKNGATHYWSLEKLKQRLDLMREMYDRAGEMASSAQDESE FT TTVTGSDPFYDRFHWFKLVGSSPIFHGCVNERLADRTPSPTFSTADSDITELADEQQDE FT MEDFDDEAFVDDAGSDAGTEEGSDLFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPL FT IHRVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNEYFNQSDFSS FT VAMTRSGLSLEELRIVEGQGQSSEVITPPEEISRINDLDLKSSTLLDGKMVMEGFSEEI FT GNHLKLGSAFTFRVTVLQASGILPEYADIFCQFNFLHRHDEAFSTEPLKNNGRGSPLAF FT YHVQNIAVEITESFVDYIKTKPIVFEVFGHYQQHPLHLQGQELNSPPQPCRRFFPPPMP FT LSKPVPATKLNTMSKTSLGQSMSKYDLLVWFEISELEPTGEYIPAVVDHTAGLPCQGTF FT LLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRNKPEVDEAAVDAILSLNIISAKY FT LKSSHNSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQPAVITK FT DVCMVFYSRDAKISPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCKMSDTGSPGMQRRR FT RKILDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKLELLHEVEKTRHFLLLRERLGD FT SIPKSLSDSLSPSLSSGTLSTSTSISSQISTTTFESAITPSESSGYDSGDIESLVDREK FT ELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSESSFSSATLTPSSTCPSL FT VDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARAGKNEFLNLVPDIEEIR FT PSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLSTAQVEYSE FT DQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRRCPSQSK FT Y" FT CDS join(AL358013.19:46971..47076,AL358013.19:70889..70965, FT AL358013.19:73135..73314,AL358013.19:76547..76612, FT AL358013.19:82022..82200,AL358013.19:82794..82905, FT AL358013.19:86144..86221,AL358013.19:86883..86948, FT AL358013.19:90070..90145,AL358013.19:90963..91041, FT AL358013.19:92628..92770,AL358013.19:97042..97175, FT AL358013.19:105724..105803,AL358013.19:106689..106764, FT AL358013.19:109728..109807,AL358013.19:110302..110408, FT AL358013.19:111224..111307,AL358013.19:111539..111719, FT AL358013.19:111816..111888,AL358013.19:134685..134778, FT AL358013.19:136351..136499,AL358013.19:138526..138704, FT AL358013.19:139400..139537,AL358013.19:140753..141001, FT AL358013.19:149162..149280,AL358013.19:151299..151384, FT AL358013.19:151716..151845,AL358013.19:152013..152175, FT AL358013.19:154411..154501,AL358013.19:156692..156810, FT AL358013.19:157874..157929,AL358013.19:160487..160595, FT AL358013.19:162403..162469,AL358013.19:163291..163375, FT AL358013.19:167273..167378,10420987..10421101, FT 10421750..10421883,10423341..10423402,10425158..10425303, FT 10425467..10425706,10428525..10428596,10431199..10431320, FT 10434374..10434523,10434912..10435104,10435313..10435431, FT 10436603..10436645) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-002" FT /standard_name="OTTHUMP00000001773" FT /product="kinesin family member 1B" FT /note="match: proteins: Tr:O60333" FT /protein_id="CAI95752.1" FT /translation="MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKE FT APKSFSFDYSYWSHTSPEDPCFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS FT YTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNK FT GNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFT FT IVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV FT ISALAEVSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLR FT YADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDTSMGSLTSSPSS FT CSLSSQVGLTSVTSIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRME FT REALLAEMGVAIREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADA FT ERRQDIVLSGAHIKEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVSQPVQLRSGN FT RIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKR FT LQEMEILYKKEKEEADLLLEQQRLDYESKLQALQKQVETRSLAAETTEEEEEEEEVPWT FT QHEFELAQWAFRKWKSHQFTSLRDLLWGNAVYLKEANAISVELKKKVQFQFVLLTDTLY FT SPLPPELLPTEMEKTHEDRPFPRTVVAVEVQDLKNGATHYWSLEKLKQRLDLMREMYDR FT AGEMASSAQDESETTVTGSDPFYDRFHWFKLVGSSPIFHGCVNERLADRTPSPTFSTAD FT SDITELADEQQDEMEDFDDEAFVDDAGSDAGTEEGSDLFSDGHDPFYDRSPWFILVGRA FT FVYLSNLLYPVPLIHRVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKIS FT FDNEYFNQSDFSSVAMTRSGLSLEELRIVEGQGQSSEVITPPEEISRINDLDLKSSTLL FT DGKMVMEGFSEEIGNHLKLGSAFTFRVTVLQASGILPEYADIFCQFNFLHRHDEAFSTE FT PLKNNGRGSPLAFYHVQNIAVEITESFVDYIKTKPIVFEVFGHYQQHPLHLQGQELNSP FT PQPCRRFFPPPMPLSKPVPATKLNTMSKTSLGQSMSKYDLLVWFEISELEPTGEYIPAV FT VDHTAGLPCQGTFLLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRNKPEVDEAAV FT DAILSLNIISAKYLKSSHNSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYL FT ELDHCIQPAVITKDVCMVFYSRDAKISPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCK FT MSDTGSPGMQRRRRKILDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKLELLHEVEK FT TRHFLLLRERLGDSIPKSLSDSLSPSLSSGTLSTSTSISSQISTTTFESAITPSESSGY FT DSGDIESLVDREKELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSESSFS FT SATLTPSSTCPSLVDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARAGKN FT EFLNLVPDIEEIRPSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERG FT IINLSTAQVEYSEDQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTI FT RSKLSRRCPSQSKY" FT CDS join(AL358013.19:46971..47076,AL358013.19:70889..70965, FT AL358013.19:73135..73314,AL358013.19:76547..76612, FT AL358013.19:82022..82200,AL358013.19:82794..82905, FT AL358013.19:86144..86221,AL358013.19:86883..86948, FT AL358013.19:87656..87673,AL358013.19:90070..90145, FT AL358013.19:90963..91041,AL358013.19:92628..92770, FT AL358013.19:93739..93780,AL358013.19:96964..97175, FT AL358013.19:105724..105803,AL358013.19:106689..106764, FT AL358013.19:109728..109807,AL358013.19:110302..110408, FT AL358013.19:111224..111307,AL358013.19:111539..111719, FT AL358013.19:111816..111888,AL358013.19:134685..134778, FT AL358013.19:136351..136499,AL358013.19:138526..138704, FT AL358013.19:139400..139537,AL358013.19:140753..141001, FT AL358013.19:149162..149280,AL358013.19:151299..151384, FT AL358013.19:151716..151845,AL358013.19:152013..152175, FT AL358013.19:154411..154501,AL358013.19:156692..156810, FT AL358013.19:157874..157929,AL358013.19:160487..160595, FT AL358013.19:162403..162469,AL358013.19:163291..163375, FT AL358013.19:167273..167378,10420987..10421101, FT 10421750..10421883,10423341..10423402,10425158..10425303, FT 10425467..10425706,10428525..10428596,10431199..10431320, FT 10434374..10434523,10434912..10435104,10435313..10435431, FT 10438397..10438460) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-005" FT /standard_name="OTTHUMP00000001776" FT /product="kinesin family member 1B" FT /note="match: proteins: Sw:O60333" FT /protein_id="CAI95754.1" FT /translation="MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKE FT APKSFSFDYSYWSHTSPEDPCFASQNRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKS FT YTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSYSVEVSYMEIYCERVRDLLNPKNK FT GNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFT FT IVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKV FT ISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDE FT TLSTLRYADRAKQIKCNAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDIDPLID FT DYSGSGSKYLKDFQNNKHRYLLASENQRPGHFSTASMGSLTSSPSSCSLSSQVGLTSVT FT SIQERIMSTPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIR FT EDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHI FT KEEHCIFRSERSNSGEVIVTLEPCERSETYVNGKRVSQPVQLRSGNRIIMGKNHVFRFN FT HPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQEMEKRLQEMEILYKKEKE FT EADLLLEQQRLDYESKLQALQKQVETRSLAAETTEEEEEEEEVPWTQHEFELAQWAFRK FT WKSHQFTSLRDLLWGNAVYLKEANAISVELKKKVQFQFVLLTDTLYSPLPPELLPTEME FT KTHEDRPFPRTVVAVEVQDLKNGATHYWSLEKLKQRLDLMREMYDRAGEMASSAQDESE FT TTVTGSDPFYDRFHWFKLVGSSPIFHGCVNERLADRTPSPTFSTADSDITELADEQQDE FT MEDFDDEAFVDDAGSDAGTEEGSDLFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPL FT IHRVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNEYFNQSDFSS FT VAMTRSGLSLEELRIVEGQGQSSEVITPPEEISRINDLDLKSSTLLDGKMVMEGFSEEI FT GNHLKLGSAFTFRVTVLQASGILPEYADIFCQFNFLHRHDEAFSTEPLKNNGRGSPLAF FT YHVQNIAVEITESFVDYIKTKPIVFEVFGHYQQHPLHLQGQELNSPPQPCRRFFPPPMP FT LSKPVPATKLNTMSKTSLGQSMSKYDLLVWFEISELEPTGEYIPAVVDHTAGLPCQGTF FT LLHQGIQRRITVTIIHEKGSELHWKDVRELVVGRIRNKPEVDEAAVDAILSLNIISAKY FT LKSSHNSSRTFYRFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQPAVITK FT DVCMVFYSRDAKISPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCKMSDTGSPGMQRRR FT RKILDTSVAYVRGEENLAGWRPRGDSLILEHQWELEKLELLHEVEKTRHFLLLRERLGD FT SIPKSLSDSLSPSLSSGTLSTSTSISSQISTTTFESAITPSESSGYDSGDIESLVDREK FT ELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSESSFSSATLTPSSTCPSL FT VDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARAGKNEFLNLVPDIEEIR FT PSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLSTAQVEYSE FT DQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRPGHLASEIIRED FT KSVSFSCQ" FT mRNA join(10472891..10473308,10477044..10477101) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-010" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:BQ373105.1" FT mRNA join(10475349..10475449,10477044..10477174, FT 10477433..10477566,10478883..10478982,10479474..10479596, FT 10479687..10479887) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-009" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:BF028825.1" FT mRNA join(10478869..10478982,10479474..10479865) FT /gene="PGD" FT /locus_tag="RP4-736L20.2-011" FT /product="phosphogluconate dehydrogenase" FT /note="match: ESTs: Em:BQ329168.1" FT polyA_signal 10480180..10480185 FT polyA_site 10480201 FT mRNA join(10490159..10490625,10493899..10494022, FT 10494714..10494747,AL354956.13:655..721, FT AL354956.13:11685..12461) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-002" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: cDNAs: Em:AF521016.1" FT /note="match: ESTs: Em:AI278922.1" FT mRNA join(10490441..10490625,10493899..10494022, FT 10494714..10494747,AL354956.13:11685..11967) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-003" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: cDNAs: Em:AF516753.1" FT mRNA join(10490500..10490625,10493899..10494022, FT 10494714..10494747,AL354956.13:655..721, FT AL354956.13:2573..3017) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-001" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: cDNAs: Em:BC029430.1" FT CDS join(10490575..10490625,10493899..10494022, FT 10494714..10494747,AL354956.13:655..721, FT AL354956.13:2573..2713) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-001" FT /standard_name="OTTHUMP00000065118" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: proteins: Sw:Q8N2Z9.1" FT /protein_id="CAI95755.1" FT /translation="MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQ FT TIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIA FT QINLERKAQKKKKSEDGSKNSRQPAEAGVVESEN" FT CDS join(10490575..10490625,10493899..10494022, FT 10494714..10494747,AL354956.13:11685..11709) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-003" FT /standard_name="OTTHUMP00000065120" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: proteins: Sw:Q8N2Z9-3.1 Sw:Q8N2Z9.1" FT /protein_id="CAI95756.1" FT /translation="MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQ FT TIAAISELTFRQCENFAKDLEMFASICRKRQE" FT CDS join(10490575..10490625,10493899..10494022, FT 10494714..10494747,AL354956.13:655..721, FT AL354956.13:11685..11903) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-002" FT /standard_name="OTTHUMP00000065119" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: proteins: Sw:Q8N2Z9-2.1 Sw:Q8N2Z9.1" FT /protein_id="CAI95757.1" FT /translation="MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQ FT TIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLHMQEAAGIRKSS FT LLTFLAWWFEWTSQASAGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSC FT K" FT mRNA join(10490840..10491458,10493899..10494022, FT 10494714..10494747,AL354956.13:655..721, FT AL354956.13:2573..2642) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-005" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AL556284.2 Em:BM466649.1" FT mRNA join(10491180..10491458,AL354956.13:655..721, FT AL354956.13:2573..2810) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-007" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AI922894.1" FT mRNA join(10491315..10491458,AL354956.13:655..721, FT AL354956.13:11685..11967) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-009" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AA858169.1" FT mRNA join(10494724..10494747,AL354956.13:655..721, FT AL354956.13:2573..2749,AL354956.13:11685..12265) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-008" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AI198670.1 Em:AI359654.1 FT Em:BE856317.1 Em:BX413583.2" FT mRNA join(AL358013.19:159417..159559,AL358013.19:160487..160595, FT AL358013.19:162403..162469,AL358013.19:163291..163375, FT AL358013.19:167273..167378,10420987..10421101, FT 10421750..10421883) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-008" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:BI829019.1" FT mRNA join(AL358013.19:160263..160595,AL358013.19:162403..162469, FT AL358013.19:163291..163375,AL358013.19:167273..167378, FT 10420987..10421101,10421750..10421882) FT /gene="KIF1B" FT /locus_tag="RP4-736L20.1-009" FT /product="kinesin family member 1B" FT /note="match: ESTs: Em:CD244458.1" FT misc_feature 10499750..10557788 FT /note="annotated region of clone" FT mRNA join(10500180..10500470,10502322..10502714) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-006" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:BX091212.1 Em:N47122.1" FT misc_feature 10501749 FT /note="Clone_right_end: RP4-736L20" FT polyA_signal 10502743..10502748 FT polyA_site 10502766 FT mRNA join(10509776..10510379,10511434..10511959) FT /gene="CORT" FT /locus_tag="RP5-1113E3.4-001" FT /product="cortistatin" FT /note="match: cDNAs: Em:AB000263.1 Em:AF013252.1 FT Em:AF086433.1 Em:AY358561.1 Em:BC040034.1" FT CDS join(10510131..10510379,10511434..10511652) FT /gene="CORT" FT /locus_tag="RP5-1113E3.4-001" FT /standard_name="OTTHUMP00000001901" FT /product="cortistatin" FT /note="match: proteins: Sw:O00230.1 Tr:Q5T6G0.1" FT /protein_id="CAI19195.1" FT /translation="MYRHKNSWRLGLKYPPSSKEETQVPKTLISGLPGRKSSSRVGEKL FT QSAHKMPLSPGLLLLLLSGATATAALPLEGGPTGRDSEHMQEAAGIRKSSLLTFLAWWF FT EWTSQASAGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSCK" FT polyA_signal 10511696..10511701 FT polyA_site 10511716 FT polyA_signal 10511935..10511940 FT polyA_site 10511959 FT polyA_signal 10512037..10512042 FT polyA_site 10512060 FT polyA_site complement(10516579) FT polyA_signal complement(10516611..10516616) FT mRNA join(10518612..10518829,10519147..10519395) FT /locus_tag="RP5-1113E3.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI697430.1" FT polyA_site complement(10522525) FT polyA_signal complement(10522539..10522544) FT polyA_site complement(10522920) FT mRNA complement(join(10522578..10523266,10523488..10523677, FT 10527247..10527389)) FT /gene="DFFA" FT /locus_tag="RP5-1113E3.2-004" FT /product="DNA fragmentation factor, 45kDa, alpha FT polypeptide" FT /note="match: ESTs: Em:AL572842.2" FT mRNA join(10532345..10532637,10555331..10555378, FT AL591403.10:21297..21400,AL591403.10:40482..40841) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-002" FT /product="peroxisomal biogenesis factor 14" FT /note="match: ESTs: Em:BM908123.1" FT mRNA complement(join(10516579..10521759,10523115..10523266, FT 10523488..10523677,10527247..10527389,10529234..10529395, FT 10532380..10532583)) FT /gene="DFFA" FT /locus_tag="RP5-1113E3.2-001" FT /product="DNA fragmentation factor, 45kDa, alpha FT polypeptide" FT /note="match: cDNAs: Em:BC000037.1 Em:BC007112.1 FT Em:BC007721.1 Em:BT006980.1 Em:U91985.1" FT CDS complement(join(10521547..10521759,10523115..10523266, FT 10523488..10523677,10527247..10527389,10529234..10529395, FT 10532380..10532515)) FT /gene="DFFA" FT /locus_tag="RP5-1113E3.2-001" FT /standard_name="OTTHUMP00000001903" FT /product="DNA fragmentation factor, 45kDa, alpha FT polypeptide" FT /note="match: proteins: Sw:O00273 Sw:O54786 Tr:O00273 FT Tr:Q8BQC7" FT /protein_id="CAI19196.1" FT /translation="MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSK FT ACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNSDGGTA FT WISQESFDVDETDSGAGLKWKNVARQLKEDLSSIILLSEEDLQMLVDAPCSDLAQELRQ FT SCATVQRLQHTLQQVLDQREEVRQSKQLLQLYLQALEKEGSLLSKQEESKAAFGEEVDA FT VDTGISRETSSDVALASHILTALREKQAPELSLSSQDLELVTKEDPKALAVALNWDIKK FT TETVQEACERELALRLQQTQSLHSLRSISASKASPPGDLQNPKRARQDPT" FT mRNA complement(join(10521700..10521759,10523045..10523266, FT 10527247..10527389,10529234..10529395,10532380..10532536)) FT /gene="DFFA" FT /locus_tag="RP5-1113E3.2-003" FT /product="DNA fragmentation factor, 45kDa, alpha FT polypeptide" FT /note="match: ESTs: Em:BE299794.1" FT mRNA complement(join(10522525..10523266,10523488..10523677, FT 10527247..10527389,10529234..10529395,10532380..10532545)) FT /gene="DFFA" FT /locus_tag="RP5-1113E3.2-002" FT /product="DNA fragmentation factor, 45kDa, alpha FT polypeptide" FT /note="match: cDNAs: Em:AF087573.1 Em:AF103799.1" FT CDS complement(join(10523091..10523266,10523488..10523677, FT 10527247..10527389,10529234..10529395,10532380..10532515)) FT /gene="DFFA" FT /locus_tag="RP5-1113E3.2-002" FT /standard_name="OTTHUMP00000001904" FT /product="DNA fragmentation factor, 45kDa, alpha FT polypeptide" FT /protein_id="CAI19197.1" FT /translation="MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSK FT ACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKFVALASNEKWAYNNSDGGTA FT WISQESFDVDETDSGAGLKWKNVARQLKEDLSSIILLSEEDLQMLVDAPCSDLAQELRQ FT SCATVQRLQHTLQQVLDQREEVRQSKQLLQLYLQALEKEGSLLSKQEESKAAFGEEVDA FT VDTGISRETSSDVALASHILTALREKQAPELSLSSQDLEVGGNQGH" FT mRNA join(10534944..10535059,10555331..10555378, FT AL591403.10:40482..40566,AL139423.25:7820..7948, FT AL139423.25:26914..26999,AL139423.25:31601..31703, FT AL139423.25:32922..33019,AL139423.25:35854..35945, FT AL139423.25:38113..39340) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-001" FT /product="peroxisomal biogenesis factor 14" FT /note="match: cDNAs: Em:AB017546.1 Em:AF045186.1 FT Em:AK002194.1 Em:BC006327.1" FT /note="match: ESTs: Em:BG715484.1" FT CDS join(10535024..10535059,10555331..10555378, FT AL591403.10:40482..40566,AL139423.25:7820..7948, FT AL139423.25:26914..26999,AL139423.25:31601..31703, FT AL139423.25:32922..33019,AL139423.25:35854..35945, FT AL139423.25:38113..38569) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-001" FT /standard_name="OTTHUMP00000001902" FT /product="peroxisomal biogenesis factor 14" FT /note="match: proteins: Sw:O75381 Sw:O75381 Sw:Q9R0A0 FT Tr:Q9QX52 Tr:Q9R0A0 Tr:Q9Z2Z3 Tr:Q9Z2Z4" FT /protein_id="CAI19198.1" FT /translation="MASSEQAEQPSQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSP FT LATRRAFLKKKGLTDEEIDMAFQQSGTAADEPSSLGPATQVVPVQPPHLISQPYSPAGS FT RWRDYGALAIIMAGIAFGFHQLYKKYLLPLILGGREDRKQLERMEAGLSELSGSVAQTV FT TQLQTTLASVQELLIQQQQKIQELAHELAAAKATTSTNWILESQNINELKSEINSLKGL FT LLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGH FT SPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEE FT DCLGVQREDRRGGDGQINEQVEKLRRPEGASNESERD" FT mRNA join(10555329..10555378,AL591403.10:40482..40566, FT AL139423.25:7820..7948,AL139423.25:26914..26999, FT AL139423.25:31601..31868) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-004" FT /product="peroxisomal biogenesis factor 14" FT /note="match: ESTs: Em:BE044358.1" FT misc_feature 10555789 FT /note="Clone_left_end: RP11-108G8" FT mRNA join(AL139424.21:75131..75597,AL139424.21:78871..78994, FT AL139424.21:79686..79719,10500404..10500470, FT 10511434..10512210) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-002" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: cDNAs: Em:AF521016.1" FT /note="match: ESTs: Em:AI278922.1" FT mRNA join(AL139424.21:75413..75597,AL139424.21:78871..78994, FT AL139424.21:79686..79719,10511434..10511716) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-003" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: cDNAs: Em:AF516753.1" FT mRNA join(AL139424.21:75472..75597,AL139424.21:78871..78994, FT AL139424.21:79686..79719,10500404..10500470, FT 10502322..10502766) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-001" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: cDNAs: Em:BC029430.1" FT CDS join(AL139424.21:75547..75597,AL139424.21:78871..78994, FT AL139424.21:79686..79719,10500404..10500470, FT 10502322..10502462) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-001" FT /standard_name="OTTHUMP00000065118" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: proteins: Sw:Q8N2Z9.1" FT /protein_id="CAI19199.1" FT /translation="MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQ FT TIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIA FT QINLERKAQKKKKSEDGSKNSRQPAEAGVVESEN" FT CDS join(AL139424.21:75547..75597,AL139424.21:78871..78994, FT AL139424.21:79686..79719,10511434..10511458) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-003" FT /standard_name="OTTHUMP00000065120" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: proteins: Sw:Q8N2Z9-3.1 Sw:Q8N2Z9.1" FT /protein_id="CAI19200.1" FT /translation="MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQ FT TIAAISELTFRQCENFAKDLEMFASICRKRQE" FT CDS join(AL139424.21:75547..75597,AL139424.21:78871..78994, FT AL139424.21:79686..79719,10500404..10500470, FT 10511434..10511652) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-002" FT /standard_name="OTTHUMP00000065119" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: proteins: Sw:Q8N2Z9-2.1 Sw:Q8N2Z9.1" FT /protein_id="CAI19201.1" FT /translation="MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQ FT TIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRSNSLHMQEAAGIRKSS FT LLTFLAWWFEWTSQASAGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSC FT K" FT mRNA join(AL139424.21:75812..76430,AL139424.21:78871..78994, FT AL139424.21:79686..79719,10500404..10500470, FT 10502322..10502391) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-005" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AL556284.2 Em:BM466649.1" FT mRNA join(AL139424.21:76152..76430,10500404..10500470, FT 10502322..10502559) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-007" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AI922894.1" FT mRNA join(AL139424.21:76287..76430,10500404..10500470, FT 10511434..10511716) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-009" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AA858169.1" FT mRNA join(AL139424.21:79696..79719,10500404..10500470, FT 10502322..10502498,10511434..10512014) FT /gene="APITD1" FT /locus_tag="RP5-1113E3.1-008" FT /product="apoptosis-inducing, TAF9-like domain 1" FT /note="match: ESTs: Em:AI198670.1 Em:AI359654.1 FT Em:BE856317.1 Em:BX413583.2" FT misc_feature 10557789..10651475 FT /note="annotated region of clone" FT misc_feature 10580596 FT /note="Clone_right_end: RP5-1113E3" FT mRNA join(AL354956.13:32596..32888,AL354956.13:55582..55629, FT 10577085..10577188,10596270..10596629) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-002" FT /product="peroxisomal biogenesis factor 14" FT /note="match: ESTs: Em:BM908123.1" FT mRNA join(AL354956.13:35195..35310,AL354956.13:55582..55629, FT 10596270..10596354,AL139423.25:7820..7948, FT AL139423.25:26914..26999,AL139423.25:31601..31703, FT AL139423.25:32922..33019,AL139423.25:35854..35945, FT AL139423.25:38113..39340) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-001" FT /product="peroxisomal biogenesis factor 14" FT /note="match: cDNAs: Em:AB017546.1 Em:AF045186.1 FT Em:AK002194.1 Em:BC006327.1" FT /note="match: ESTs: Em:BG715484.1" FT CDS join(AL354956.13:35275..35310,AL354956.13:55582..55629, FT 10596270..10596354,AL139423.25:7820..7948, FT AL139423.25:26914..26999,AL139423.25:31601..31703, FT AL139423.25:32922..33019,AL139423.25:35854..35945, FT AL139423.25:38113..38569) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-001" FT /standard_name="OTTHUMP00000001902" FT /product="peroxisomal biogenesis factor 14" FT /note="match: proteins: Sw:O75381 Sw:O75381 Sw:Q9R0A0 FT Tr:Q9QX52 Tr:Q9R0A0 Tr:Q9Z2Z3 Tr:Q9Z2Z4" FT /protein_id="CAH70044.1" FT /translation="MASSEQAEQPSQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSP FT LATRRAFLKKKGLTDEEIDMAFQQSGTAADEPSSLGPATQVVPVQPPHLISQPYSPAGS FT RWRDYGALAIIMAGIAFGFHQLYKKYLLPLILGGREDRKQLERMEAGLSELSGSVAQTV FT TQLQTTLASVQELLIQQQQKIQELAHELAAAKATTSTNWILESQNINELKSEINSLKGL FT LLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGH FT SPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEE FT DCLGVQREDRRGGDGQINEQVEKLRRPEGASNESERD" FT mRNA join(10595945..10596117,10596270..10596346) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-003" FT /product="peroxisomal biogenesis factor 14" FT /note="match: ESTs: Em:AA019403.1" FT mRNA join(AL354956.13:55580..55629,10596270..10596354, FT AL139423.25:7820..7948,AL139423.25:26914..26999, FT AL139423.25:31601..31868) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-004" FT /product="peroxisomal biogenesis factor 14" FT /note="match: ESTs: Em:BE044358.1" FT misc_feature 10651476..10794760 FT /note="annotated region of clone" FT misc_feature 10651476 FT /note="Clone_left_end: RP4-734G22" FT mRNA join(AL354956.13:35195..35310,AL354956.13:55582..55629, FT AL591403.10:40482..40566,10659295..10659423, FT 10678389..10678474,10683076..10683178,10684397..10684494, FT 10687329..10687420,10689588..10690815) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-001" FT /product="peroxisomal biogenesis factor 14" FT /note="match: cDNAs: Em:AB017546.1 Em:AF045186.1 FT Em:AK002194.1 Em:BC006327.1" FT /note="match: ESTs: Em:BG715484.1" FT CDS join(AL354956.13:35275..35310,AL354956.13:55582..55629, FT AL591403.10:40482..40566,10659295..10659423, FT 10678389..10678474,10683076..10683178,10684397..10684494, FT 10687329..10687420,10689588..10690044) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-001" FT /standard_name="OTTHUMP00000001902" FT /product="peroxisomal biogenesis factor 14" FT /note="match: proteins: Sw:O75381 Sw:O75381 Sw:Q9R0A0 FT Tr:Q9QX52 Tr:Q9R0A0 Tr:Q9Z2Z3 Tr:Q9Z2Z4" FT /protein_id="CAD20149.2" FT /translation="MASSEQAEQPSQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSP FT LATRRAFLKKKGLTDEEIDMAFQQSGTAADEPSSLGPATQVVPVQPPHLISQPYSPAGS FT RWRDYGALAIIMAGIAFGFHQLYKKYLLPLILGGREDRKQLERMEAGLSELSGSVAQTV FT TQLQTTLASVQELLIQQQQKIQELAHELAAAKATTSTNWILESQNINELKSEINSLKGL FT LLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGH FT SPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEE FT DCLGVQREDRRGGDGQINEQVEKLRRPEGASNESERD" FT polyA_signal 10690790..10690795 FT polyA_site 10690815 FT polyA_site complement(10696661) FT polyA_signal complement(10696674..10696679) FT mRNA complement(join(10697178..10697465,10698772..10698820)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-004" FT /product="castor zinc finger 1" FT /note="match: ESTs: Em:BU729694.1" FT mRNA complement(join(10707270..10708196,10709127..10709249, FT 10709340..10709494,10710749..10710812,10710998..10711133, FT 10713434..10714275,10714476..10714648,10715706..10715870, FT 10716703..10716793,10718565..10718633,10719759..10720593, FT 10725140..10725628,10753931..10753969,10765549..10765601, FT AL031984.13:16941..17097,AL031984.13:52804..52890)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-001" FT /product="castor zinc finger 1" FT /note="match: cDNAs: Em:AK000328.1 Em:AK092289.1 FT Em:AX747454.1 Em:BC051883.1 Em:BC051883.2" FT mRNA join(AL354956.13:55580..55629,AL591403.10:40482..40566, FT 10659295..10659423,10678389..10678474,10683076..10683343) FT /gene="PEX14" FT /locus_tag="RP4-734G22.1-004" FT /product="peroxisomal biogenesis factor 14" FT /note="match: ESTs: Em:BE044358.1" FT polyA_site complement(10707270) FT polyA_site complement(10707277) FT polyA_signal complement(10707282..10707287) FT mRNA complement(join(10696661..10700116,10702916..10703057, FT 10703217..10703368,10704974..10705145,10706185..10706383, FT 10707858..>10708196)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-003" FT /product="castor zinc finger 1" FT /note="match: ESTs: Em:AA449398.1 Em:AI085338.1 FT Em:AI283046.1 Em:AW812234.1 Em:AW812251.1 Em:AW872786.1 FT Em:BG695926.1 Em:BM673865.1 Em:BQ188241.1 Em:R32739.1 FT Em:R50443.1" FT /note="match: cDNAs: Em:BC035954.1" FT CDS complement(join(10698999..10700116,10702916..10703057, FT 10703217..10703368,10704974..10705145,10706185..10706383, FT 10707858..>10708196)) FT /codon_start=2 FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-003" FT /standard_name="OTTHUMP00000002018" FT /product="castor zinc finger 1" FT /note="match: proteins: Tr:Q8BWG3 Tr:Q8CI82" FT /protein_id="CAI22570.1" FT /translation="FHFRTEGGAAKGNTEAAFPASAAETKPPMAPSSPPVPPVTTATVS FT SLEGPAPSPASVPSTPTLLAWKQLASTIPQMPQIPASVPHLPASPLATTSLENAKPQVK FT PGFLQFQENDPCLATDCKYANKFHFHCLFGNCKYVCKTSGKAESHCLDHINPNNNLVNV FT RDQFAYYSLQCLCPNQHCEFRMRGHYHCLRTGCYFVTNITTKLPWHIKKHEKAERRAAN FT GFKYFTKREECGRLGCKYNQVNSHFHCIREGCQFSFLLKHQMTSHARKHMRRMLGKNFD FT RVPPSQGPPGLMDAETDECMDYTGCSPGAMSSESSTMDRSCSSTPVGNESTAAGNTISM FT PTASGAKKRFWIIEDMSPFGKRRKTASSRKMLDEGMMLEGFRRFDLYEDCKDAACQFSL FT KVTHYHCTRENCGYKFCGRTHMYKHAQHHDRVDNLVLDDFKRFKASLSCHFADCPFSGT FT STHFHCLRCRFRCTDSTKVTAHRKHHGKQDVISAAGFCQFSSSADCAVPDCKYKLKCSH FT FHCTFPGCRHTVVGMSQMDSHKRKHEKQERGEPAAEGPAPGPPISLDGSLSLGAEPGSL FT LFLQSAAAGLGLALGDAGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEEELELPEEE FT AEDDEDEDDDEDDDDEDDDEDDDDEDLRTDSEESLPEAAAEAAGAGARTPALAALAALG FT APGPAPTAASSP" FT mRNA complement(join(10710541..10710812,10710998..10711157)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-005" FT /product="castor zinc finger 1" FT /note="match: ESTs: Em:BG984807.1 Em:BG984808.1" FT mRNA complement(join(10713269..10714275,10714476..10714516)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-006" FT /product="castor zinc finger 1" FT /note="match: ESTs: Em:BM563826.1" FT mRNA complement(join(10718064..10718633,10719759..10721455)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-002" FT /product="castor zinc finger 1" FT /note="match: cDNAs: Em:AK022285.1" FT misc_feature 10742449 FT /note="Clone_left_end: RP4-552O20" FT CDS complement(join(10707854..10708196,10709127..10709249, FT 10709340..10709494,10710749..10710812,10710998..10711133, FT 10713434..10714275,10714476..10714648,10715706..10715870, FT 10716703..10716793,10718565..10718633,10719759..10720593, FT 10725140..10725628,10753931..10753946)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-001" FT /standard_name="OTTHUMP00000002017" FT /product="castor zinc finger 1" FT /note="match: proteins: Sw:Q86V15" FT /protein_id="CAI22571.1" FT /translation="MDLGTAEGTRCTDPPAGKPAMAPKRKGGLKLNAICAKLSRQVVVE FT KRADAGSHTEGSPSQPRDQERSGPESGAARAPRSEEDKRRAVIEKWVNGEYSEEPAPTP FT VLGRIAREGLELPPEGVYMVQPQGCSDEEDHAEEPSKDGGALEEKDSDGAASKEDSGPS FT TRQASGEASSLRDYAASTMTEFLGMFGYDDQNTRDELARKISFEKLHAGSTPEAATSSM FT LPTSEDTLSKRARFSKYEEYIRKLKAGEQLSWPAPSTKTEERVGKEVVGTLPGLRLPSS FT TAHLETKATILPLPSHSSVQMQNLVARASKYDFFIQKLKTGENLRPQNGSTYKKPSKYD FT LENVKYLHLFKPGEGSPDMGGAIAFKTGKVGRPSKYDVRGIQKPGPAKVPPTPSLAPAP FT LASVPSAPSAPGPGPEPPASLSFNTPEYLKSTFSKTDSITTGTVSTVKNGLPTDKPAVT FT EDVNIYQKYIARFSGSQHCGHIHCAYQYREHYHCLDPECNYQRFTSKQDVIRHYNMHKK FT RDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCNKVYTSTSDVMTHENFHK FT KNTQLINDGFQRFRATEDCGTADCQFYGQKTTHFHCRRPGCTFTFKNKCDIEKHKSYHI FT KDDAYAKDGFKKFYKYEECKYEGCVYSKATNHFHCIRAGCGFTFTSTSQMTSHKRKHER FT RHIRSSGALGLPPSLLGAKDTEHEESSNDDLVDFSALSSKNSSLSASPTSQQSSASLAA FT ATAATEAGPSATKPPNSKISGLLPQGLPGSIPLALALSNSGLPTPTPYFPILAGRGSTS FT LPVGTPSLLGAVSSGSAASATPDTPTLVASGAGDSAPVAAASVPAPPASIMERISASKG FT LISPMMARLAAAALKPSATFDPGSGQQVTPARFPPAQVKPEPGESTGAPGPHEASQDRS FT LDLTVKEPSNESNGHAVPANSSLLSSLMNKMSQGNPGLGSLLNIKAEAEGSPAAEPSPF FT LGKAVKALVQEKLAEPWKVYLRRFGTKDFCDGQCDFLHKAHFHCVVEECGALFSTLDGA FT IKHANFHFRTEGGAAKGNTEAAFPASAAETKPPMAPSSPPVPPVTTATVSSLEGPAPSP FT ASVPSTPTLLAWKQLASTIPQMPQIPASVPHLPASPLATTSLENAKPQVKPGFLQFQEK FT " FT mRNA complement(join(10725140..10725628,10753931..10753969, FT 10754354..10754536)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-007" FT /product="castor zinc finger 1" FT /note="match: ESTs: Em:BQ423979.1 Em:BQ552589.1" FT misc_feature 10754525..10754941 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(10764253..10764619,10765549..10765632)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-008" FT /product="castor zinc finger 1" FT /note="match: ESTs: Em:BM700915.1" FT misc_feature 10794760 FT /note="Clone_right_end: RP4-734G22" FT misc_feature 10794761..10803917 FT /note="annotated region of clone" FT misc_feature 10803718 FT /note="Clone_left_end: RP1-173D1" FT misc_feature 10803918..10921155 FT /note="annotated region of clone" FT mRNA complement(join(AL139423.25:55795..56721, FT AL139423.25:57652..57774,AL139423.25:57865..58019, FT AL139423.25:59274..59337,AL139423.25:59523..59658, FT AL139423.25:61959..62800,AL139423.25:63001..63173, FT AL139423.25:64231..64395,AL139423.25:65228..65318, FT AL139423.25:67090..67158,AL139423.25:68284..69118, FT AL139423.25:73665..74153,AL139423.25:102456..102494, FT AL139423.25:114074..114126,10820758..10820914, FT 10856621..10856707)) FT /gene="CASZ1" FT /locus_tag="RP4-734G22.2-001" FT /product="castor zinc finger 1" FT /note="match: cDNAs: Em:AK000328.1 Em:AK092289.1 FT Em:AX747454.1 Em:BC051883.1 Em:BC051883.2" FT misc_feature 10921055 FT /note="Clone_right_end: RP1-173D1" FT misc_feature 10921156..11055147 FT /note="annotated region of clone" FT misc_feature 10946867..10947026 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT CDS join(10955821..10956058,10956667..10956697) FT /pseudo FT /locus_tag="RP11-340B24.3-001" FT /product="heat shock 10kDa protein 1 (chaperonin 10) FT (HSPE1) pseudogene" FT /note="match: proteins: Sw:P26772 Sw:P61603 Sw:Q64433 FT Sw:Q9W6X3 Tr:O42283 Tr:P97601 Tr:Q6WSP6 Tr:Q9JI95" FT polyA_site complement(11006530) FT polyA_site complement(11006532) FT polyA_signal complement(11006538..11006543) FT polyA_signal complement(11006546..11006551) FT mRNA complement(join(11006532..11006643,11007700..11007927)) FT /gene="C1orf127" FT /locus_tag="RP11-340B24.1-003" FT /product="chromosome 1 open reading frame 127" FT /note="match: ESTs: Em:BM052613.1 Em:BM052843.1" FT mRNA complement(join(11006528..11006795,11007700..11009808)) FT /gene="C1orf127" FT /locus_tag="RP11-340B24.1-002" FT /product="chromosome 1 open reading frame 127" FT /note="match: ESTs: Em:AK095152.1" FT mRNA complement(join(11006530..11006798,11007700..11008901, FT 11009681..11009871,11014076..11014199,11015047..11015243, FT 11017642..11017810,11018771..11018809,11024185..11024258)) FT /gene="C1orf127" FT /locus_tag="RP11-340B24.1-001" FT /product="chromosome 1 open reading frame 127" FT /note="match: cDNAs: Em:AK094437.1" FT mRNA complement(join(11006787..11006798,11007700..11008901, FT 11009759..11009871,11014076..11014199,11015047..11015243, FT 11017080..11017164,11017673..11017810,11018771..11018809, FT 11024185..11024290)) FT /gene="C1orf127" FT /locus_tag="RP11-340B24.1-004" FT /product="chromosome 1 open reading frame 127" FT /note="match: cDNAs: Em:BC126349.1" FT CDS complement(join(11007720..11008901,11009681..11009871, FT 11014076..11014199,11015047..11015243,11017642..11017810, FT 11018771..11018809,11024185..11024253)) FT /gene="C1orf127" FT /locus_tag="RP11-340B24.1-001" FT /standard_name="OTTHUMP00000002016" FT /product="chromosome 1 open reading frame 127" FT /note="match: proteins: Tr:Q8N9H9" FT /protein_id="CAH72679.1" FT /translation="MKCPMLRSRLGQESVHCGPMFIQVSRPLPLWRDNRQTPWLLSLRG FT ELVASLEDASLMGLYVDMNATTVTVQSPRQGLLQRWEVSGGQQALPGVSFQPESEVLVH FT IPKQRLGLVKRGSYIEETLSLRFLRVHQSNIFMVTENKDFVVVSIPAAGVLQVQRCQEV FT GGTPGTQAFYRVDLSLEFAEMAAPVLWTVESFFQCVGSGTESPASTAALRTTPSPPSPG FT PETPPAGVPPAASSQVWAAGPAAQEWLSRDLLHRPSDALAKKGLGPFLQTAKPARRGQT FT SASILPRVVQAQRGPQPPPGEAGIPGHPTPPATLPSEPVEGVQASPWRPRPVLPTHPAL FT TLPVSSDASSPSPPAPRPERPESLLVSGPSVTLTEGLGTVRPEQDPAKSPGSPLLLRGL FT SSGDVAAPEPIMGEPGQASEEFQPLARPWRATLAAEELVSHRSPGEPQETCSGTEVERP FT RQTGPGLPREGARGHMDLSSSEPSQDIEGPGLSILPARDATFSTPSVRQPDPSAWLSSG FT PELTGMPRVRLAAPLAVLPMEPLPPEPVRPAALLTPEASSVGGPDQARYLESAPGWPVG FT QEEWGVAHTSSPPSTQTLSLWAPTGVLLPSLVELEYPFQAGRGASLQQELTEPTLALSA FT ESHRPPELQDSVEGLSERPSR" FT CDS complement(join(11007720..11008901,11009759..11009871, FT 11014076..11014199,11015047..11015243,11017080..11017164, FT 11017673..11017810,11018771..11018809,11024185..11024253)) FT /gene="C1orf127" FT /locus_tag="RP11-340B24.1-004" FT /standard_name="OTTHUMP00000196215" FT /product="chromosome 1 open reading frame 127" FT /protein_id="CAO03597.1" FT /translation="MKCPMLRSRLGQESVHCGPMFIQVSRPLPLWRDNRQTPWLLSLRG FT ELVASLEDASLMGLYVDMNATTVTVQSPRQGLLQRWEVLNTSAELLPLWLVSGHHAYSL FT EAACPPVSFQPESEVLVHIPKQRLGLVKRGSYIEETLSLRFLRVHQSNIFMVTENKDFV FT VVSIPAAGVLQVQRCQEVGGTPGTQAFYRVDLSLEFAEMAAPVLWTVESFFQCVGSGTE FT SPASTAALRTTPSPPSPGPETPPAGVPPAASSQKGLGPFLQTAKPARRGQTSASILPRV FT VQAQRGPQPPPGEAGIPGHPTPPATLPSEPVEGVQASPWRPRPVLPTHPALTLPVSSDA FT SSPSPPAPRPERPESLLVSGPSVTLTEGLGTVRPEQDPAKSPGSPLLLRGLSSGDVAAP FT EPIMGEPGQASEEFQPLARPWRATLAAEELVSHRSPGEPQETCSGTEVERPRQTGPGLP FT REGARGHMDLSSSEPSQDIEGPGLSILPARDATFSTPSVRQPDPSAWLSSGPELTGMPR FT VRLAAPLAVLPMEPLPPEPVRPAALLTPEASSVGGPDQARYLESAPGWPVGQEEWGVAH FT TSSPPSTQTLSLWAPTGVLLPSLVELEYPFQAGRGASLQQELTEPTLALSAESHRPPEL FT QDSVEGLSERPSR" FT CDS complement(join(11051035..11051148,11051475..11051854)) FT /pseudo FT /locus_tag="RP11-340B24.2-001" FT /product="cofilin pseudogene 6" FT /note="match: proteins: Sw:P10668 Sw:P18760 Sw:P23528 FT Sw:P45592 Tr:P23528 Tr:Q544Y7 Tr:Q9CX22" FT misc_feature 11053147 FT /note="Clone_right_end: RP11-340B24" FT misc_feature 11061710 FT /note="Clone_left_end: RP4-635E18" FT misc_feature 11065710..11176478 FT /note="annotated region of clone" FT mRNA join(11072414..11072485,11073773..11074022, FT 11076901..11077064,11078790..11078930,11080486..11080546) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-004" FT /product="TAR DNA binding protein" FT /note="match: ESTs: Em:BI547516.1 Em:BI550396.1" FT mRNA join(11072699..11072800,11073773..11074022, FT 11076901..11077064,11078790..11078930,11080486..11080656, FT 11082181..11084100) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-001" FT /product="TAR DNA binding protein" FT /note="match: cDNAs: Em:AL050265.1 Em:BC001487.1 FT Em:BC001487.2 Em:BC012873.1" FT /note="match: ESTs: Em:CD703666.1" FT mRNA join(11072712..11072800,11073773..11074022, FT 11075581..11075703,11076901..11077064,11078790..11078930) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-005" FT /product="TAR DNA binding protein" FT /note="match: ESTs: Em:BM558331.1 Em:BX509845.1" FT mRNA join(11072729..11072800,11073773..11074022, FT 11076180..11076311,11076901..11077064,11078790..11078930, FT 11080486..11080655) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-006" FT /product="TAR DNA binding protein" FT /note="match: ESTs: Em:BE901725.1 Em:BG480879.1 FT Em:BG484362.1" FT mRNA join(11073773..11074022,11076901..11077064, FT 11078790..11078930,11080486..11080656,11082181..11082298, FT 11083250..11084240) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-003" FT /product="TAR DNA binding protein" FT /note="match: ESTs: Em:BC027105.1" FT mRNA join(11073773..11074022,11076901..11077064, FT 11078790..11078930,11080486..11080656,11082181..11082307, FT 11083250..11083386,11084121..11085076) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-002" FT /product="TAR DNA binding protein" FT /note="match: cDNAs: Em:AK045495.1 Em:AK076208.1" FT CDS join(11073785..11074022,11076901..11077064, FT 11078790..11078930,11080486..11080656,11082181..11082711) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-001" FT /standard_name="OTTHUMP00000002171" FT /product="TAR DNA binding protein" FT /note="match: proteins: Sw:Q13148 Sw:Q921F2 Tr:Q544R5" FT /protein_id="CAI22098.1" FT /translation="MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRN FT PVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTS FT DLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS FT QRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFI FT PKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPG FT GFGNQGGFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGML FT ASQQNQSGPSGNNQNQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNG FT GFGSSMDSKSSGWGM" FT CDS join(11073785..11074022,11076901..11077064, FT 11078790..11078930,11080486..11080656,11082181..11082298, FT 11083250..11083305) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-003" FT /standard_name="OTTHUMP00000002173" FT /product="TAR DNA binding protein" FT /protein_id="CAI22099.1" FT /translation="MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRN FT PVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTS FT DLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS FT QRHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFI FT PKPFRAFAFVTFADDQIAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGVHLI FT SNVYGRSTSLKVVL" FT mRNA complement(join(11166592..11167557,11168238..11168343, FT 11169347..11169427,11169706..11169786,11172909..11172974, FT 11174375..11174510,11174870..11174944,11175453..11175525, FT AL391561.20:2583..2665,AL391561.20:6825..6947, FT AL391561.20:7558..7705,AL391561.20:10077..10212, FT AL391561.20:12201..12375,AL391561.20:12589..12723, FT AL391561.20:13203..13385,AL391561.20:13583..13705, FT AL391561.20:14033..14131,AL391561.20:14434..14530, FT AL391561.20:15317..15417,AL391561.20:16108..17137)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-002" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: cDNAs: Em:AK126762.1" FT /note="match: ESTs: Em:BF913036.1 Em:BF913037.1" FT CDS complement(join(11167542..11167557,11168238..11168343, FT 11169347..11169427,11169706..11169786,11172909..11172974, FT 11174375..11174510,11174870..11174944,11175453..11175525, FT AL391561.20:2583..2665,AL391561.20:6825..6947, FT AL391561.20:7558..7705,AL391561.20:10077..10212, FT AL391561.20:12201..12375,AL391561.20:12589..12723, FT AL391561.20:13203..13385,AL391561.20:13583..13705, FT AL391561.20:14033..14131,AL391561.20:14434..14530, FT AL391561.20:15317..15417,AL391561.20:16108..16335)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-002" FT /standard_name="OTTHUMP00000001984" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /protein_id="CAI22101.1" FT /translation="MNFEAVLHYKHQNQARDEKKKLRHASGANITNATTAATTAATATT FT TASTEGSNSESEAESTENSPTPSPLQKKVTEDLSKTLLMYTVPAVQGFFRSISLSRGNN FT LQDTLRVLTLWFDYGHWPDVNEALVEGVKAIQIDTWLQVIPQLIARIDTPRPLVGRLIH FT QLLTDIGRYHPQALIYPLTVASKSTTTARHNAANKILKNMCEHSNTLVQQAMMVSEELI FT RVAILWHEMWHEGLEEASRLYFGERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGR FT DLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRISKQLPQLTSLELQYVSPKLLMCRD FT LELAVPGTYDPNQPIIRIQSIAPSLQVITSKQRPRKLTLMGSNGHEFVFLLKGHEDLRQ FT DERVMQLFGLVNTLLANDPTSLRKNLSIQRYAVIPLSTNSGLIGWVPHCDTLHALIRDY FT REKKKILLNIEHRIMLRMAPDYDHLTLMQKVEVFEHAVNNTAGDDLAKLLWLKSPSSEV FT WFDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLSGKILHIDFGDCFEVAMTREKF FT PEKIPFRLTRMLTNAMEVTGLDGNYRITCHTVMEVLREHKDSVMAVLEAFVYDPLLNWR FT LMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELGEPAHKKTGTTVPESIHSFIGDGLVK FT PEALNKKAIQIINRVRDKLTGRDFSHDDTLDVPTQVELLIKQATSHENLCQCYIGWCPF FT W" FT mRNA join(11082181..11082307,11083250..11083386, FT 11084359..11084392,11085167..11085261) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-007" FT /product="TAR DNA binding protein" FT /note="match: ESTs: Em:H25390.1" FT mRNA join(11083255..11083386,11084121..11084392, FT 11085167..11085265,11085608..11085796) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-008" FT /product="TAR DNA binding protein" FT /note="match: ESTs: Em:AL048311.1" FT polyA_signal 11084081..11084086 FT polyA_site 11084100 FT polyA_signal 11084220..11084225 FT polyA_site 11084240 FT mRNA join(11084284..11084392,11085167..11085548) FT /gene="TARDBP" FT /locus_tag="RP4-635E18.2-009" FT /product="TAR DNA binding protein" FT /note="match: ESTs: Em:AW439536.1 Em:W88792.1" FT polyA_signal 11085525..11085530 FT polyA_site 11085549 FT polyA_site complement(11086580) FT misc_feature 11098405..11098478 FT /note="Single clone region. Assembly confirmed by FT restriction digest data. Single read sequenced with dGTP" FT misc_feature 11098834..11099179 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 11099793 FT /note="Forced join. Gap sized to be approximately 339bp FT from restriction digest data and spanning pUC clone" FT mRNA complement(join(11097750..11097868,11102932..11103255)) FT /gene="MASP2" FT /locus_tag="RP4-635E18.3-004" FT /product="mannan-binding lectin serine peptidase 2" FT /note="match: ESTs: Em:AW827159.1" FT polyA_site complement(11104855) FT polyA_signal complement(11104870..11104875) FT mRNA complement(join(11086580..11087705,11090233..11090307, FT 11090805..11090939,11094885..11094963,11097750..11097868, FT 11102932..11103079,11103396..11103592,11105465..11105596, FT 11106613..11106790,11106948..11107176,11107260..11107280)) FT /gene="MASP2" FT /locus_tag="RP4-635E18.3-001" FT /product="mannan-binding lectin serine peptidase 2" FT /note="match: cDNAs: Em:X98400.1 Em:Y09926.1" FT CDS complement(join(11086942..11087705,11090233..11090307, FT 11090805..11090939,11094885..11094963,11097750..11097868, FT 11102932..11103079,11103396..11103592,11105465..11105596, FT 11106613..11106790,11106948..11107176,11107260..11107264)) FT /gene="MASP2" FT /locus_tag="RP4-635E18.3-001" FT /standard_name="OTTHUMP00000002174" FT /product="mannan-binding lectin serine peptidase 2" FT /note="match: proteins: Sw:O00187 Sw:O00187 Sw:Q91WP0 FT Sw:Q9JJS8 Sw:Q9JJS8 Sw:Q9JJS8 Sw:Q9JJS8 Sw:Q9JJS8 FT Sw:Q9JJS8" FT /protein_id="CAI22102.1" FT /translation="MRLLTLLGLLCGSVATPLGPKWPEPVFGRLASPGFPGEYANDQER FT RWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAPGKD FT TFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGF FT YCSCRAGYVLHRNKRTCSALCSGQVFTQRSGELSSPEYPRPYPKLSSCTYSISLEEGFS FT VILDFVESFDVETHPETLCPYDFLKIQTDREEHGPFCGKTLPHRIETKSNTVTITFVTD FT ESGDHTGWKIHYTSTAQPCPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLP FT LKSFTAVCQKDGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEET FT FYTMKVNDGKYVCEADGFWTSSKGEKSLPVCEPVCGLSARTTGGRIYGGQKAKPGDFPW FT QVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAV FT FIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLT FT QRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCRGDSGG FT ALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIISDF" FT mRNA complement(join(11104855..11105010,11105465..11105596, FT 11106613..11106790,11106948..11107176,11107260..11107290)) FT /gene="MASP2" FT /locus_tag="RP4-635E18.3-002" FT /product="mannan-binding lectin serine peptidase 2" FT /note="match: cDNAs: Em:AB008047.1 Em:Y18281.1 Em:Y18282.1 FT Em:Y18283.1" FT CDS complement(join(11104997..11105010,11105465..11105596, FT 11106613..11106790,11106948..11107176,11107260..11107264)) FT /gene="MASP2" FT /locus_tag="RP4-635E18.3-002" FT /standard_name="OTTHUMP00000002175" FT /product="mannan-binding lectin serine peptidase 2" FT /protein_id="CAI22103.1" FT /translation="MRLLTLLGLLCGSVATPLGPKWPEPVFGRLASPGFPGEYANDQER FT RWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKVLATLCGQESTDTERAPGKD FT TFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGF FT YCSCRAGYVLHRNKRTCSEQSL" FT mRNA complement(join(11104855..11106790,11106948..11107176, FT 11107260..11107284)) FT /gene="MASP2" FT /locus_tag="RP4-635E18.3-003" FT /product="mannan-binding lectin serine peptidase 2" FT /note="match: cDNAs: Em:BC052299.1" FT misc_feature 11114266 FT /note="Clone_left_end: RP4-576K7" FT polyA_site complement(11114646) FT mRNA complement(join(11114641..11114942,11115019..11115261)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-002" FT /product="spermidine synthase" FT /note="match: ESTs: Em:CA776231.1 Em:CA776540.1" FT mRNA complement(join(11114721..11115141,11115838..11115877)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-004" FT /product="spermidine synthase" FT /note="match: ESTs: Em:AI880294.1" FT mRNA complement(join(11114646..11114942,11115019..11115141, FT 11115838..11115897,11115968..11115983,11116068..11116151, FT 11116661..11116731)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-003" FT /product="spermidine synthase" FT /note="match: ESTs: Em:BQ446160.1" FT misc_feature 11117847..11117853 FT /note="sequence from overlapping clone dJ576K7 (AL359082). FT Assembly confirmed by restriction digest data" FT mRNA complement(join(11116068..11116151,11116661..11116814, FT 11118767..11118930)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-006" FT /product="spermidine synthase" FT /note="match: ESTs: Em:BQ322887.1" FT mRNA complement(join(11116759..11116814,11118857..11118949, FT 11119282..11119743)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-007" FT /product="spermidine synthase" FT /note="match: ESTs: Em:BG482529.1" FT mRNA complement(join(11114646..11114942,11115019..11115141, FT 11115838..11115983,11116068..11116151,11116661..11116814, FT 11118857..11118949,11119282..11119402,11119834..11120081)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-001" FT /product="spermidine synthase" FT /note="match: cDNAs: Em:BC000309.1 Em:BC000309.2 FT Em:BC033106.1 Em:M34338.1" FT CDS complement(join(11114922..11114942,11115019..11115141, FT 11115838..11115983,11116068..11116151,11116661..11116814, FT 11118857..11118949,11119282..11119402,11119834..11120000)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-001" FT /standard_name="OTTHUMP00000002170" FT /product="spermidine synthase" FT /note="match: proteins: Sw:P19623 Sw:Q64674 Tr:Q543H0 FT Tr:Q64674 Tr:Q8BSZ8 Tr:Q99MI5 Tr:Q9QVS0" FT /protein_id="CAI22104.1" FT /translation="MEPGPDGPAASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRR FT SRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCSHPNPRKVLIIGGGD FT GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN FT QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQ FT FCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNPSTNFQEPVQPLTQQQVAQMQLKYYNS FT DVHRAAFVLPEFARKALNDVS" FT mRNA complement(join(11116068..11116151,11116661..11116814, FT 11118857..11118949,11119282..11119437,11119834..11120077)) FT /gene="SRM" FT /locus_tag="RP4-635E18.4-005" FT /product="spermidine synthase" FT /note="match: ESTs: Em:BQ430055.1" FT polyA_site complement(11126675) FT polyA_signal complement(11126691..11126696) FT mRNA join(11128528..11128770,11130716..11133154) FT /locus_tag="RP4-635E18.7-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK055171.1" FT mRNA complement(join(11126742..11126805,11128065..11128141, FT 11128702..11128981)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-005" FT /product="exosome component 10" FT /note="match: ESTs: Em:AA738183.1" FT mRNA complement(join(11128702..11128763,11129616..11129787, FT 11130957..11133083)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-004" FT /product="exosome component 10" FT /note="match: cDNAs: Em:AK093955.1" FT mRNA complement(join(11128711..11128763,11129616..11129787, FT 11130957..11131030,11132144..11132452)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-006" FT /product="exosome component 10" FT /note="match: ESTs: Em:BI438195.1" FT CDS complement(join(11167542..11167557,11168238..11168343, FT 11169347..11169427,11169706..11169786,11172909..11172974, FT 11174375..11174510,11174870..11174944,11175453..11175525, FT AL391561.20:2583..2665,AL391561.20:6825..6947, FT AL391561.20:7558..7705,AL391561.20:10077..10212, FT AL391561.20:12201..12375,AL391561.20:12589..12723, FT AL391561.20:13203..13385,AL391561.20:13583..13705, FT AL391561.20:14033..14131,AL391561.20:14434..14530, FT AL391561.20:15317..15417,AL391561.20:16108..16356, FT AL391561.20:18659..18776,AL391561.20:19930..20045, FT AL391561.20:24883..25014,AL391561.20:25112..25237, FT AL391561.20:30227..30334,AL391561.20:30547..30624, FT AL391561.20:32255..32370,AL391561.20:35705..35805, FT AL391561.20:42731..42870,AL391561.20:53021..53096, FT AL049653.7:11312..11457,AL049653.7:11595..11757, FT AL049653.7:16615..16757,AL049653.7:21366..21512, FT AL049653.7:22868..22960,AL049653.7:24366..24528, FT AL049653.7:24850..24962,AL049653.7:25453..25620, FT AL049653.7:28202..28288,AL049653.7:40722..40972, FT AL049653.7:42979..43108,AL049653.7:43354..43488, FT AL049653.7:44490..44582,AL049653.7:45452..45541, FT AL049653.7:46197..46319,AL049653.7:49897..50102, FT AL049653.7:50456..50671,AL049653.7:52357..52601, FT AL049653.7:53607..53735,AL049653.7:55168..55354, FT AL049653.7:59679..59787,AL049653.7:59873..60148, FT AL049653.7:65893..66027,AL049653.7:68046..68246, FT AL049653.7:68987..69219,AL049653.7:70539..70647, FT AL049653.7:71302..71463)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-001" FT /standard_name="OTTHUMP00000001983" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: proteins: Sw:P42345 Sw:P42346 Sw:Q9JLN9" FT /protein_id="CAI22105.1" FT /translation="MLGTGPAAATTAATTSSNVSVLQQFASGLKSRNEETRAKAAKELQ FT HYVTMELREMSQEESTRFYDQLNHHIFELVSSSDANERKGGILAIASLIGVEGGNATRI FT GRFANYLRNLLPSNDPVVMEMASKAIGRLAMAGDTFTAEYVEFEVKRALEWLGADRNEG FT RRHAAVLVLRELAISVPTFFFQQVQPFFDNIFVAVWDPKQAIREGAVAALRACLILTTQ FT REPKEMQKPQWYRHTFEEAEKGFDETLAKEKGMNRDDRIHGALLILNELVRISSMEGER FT LREEMEEITQQQLVHDKYCKDLMGFGTKPRHITPFTSFQAVQPQQSNALVGLLGYSSHQ FT GLMGFGTSPSPAKSTLVESRCCRDLMEEKFDQVCQWVLKCRNSKNSLIQMTILNLLPRL FT AAFRPSAFTDTQYLQDTMNHVLSCVKKEKERTAAFQALGLLSVAVRSEFKVYLPRVLDI FT IRAALPPKDFAHKRQKAMQVDATVFTCISMLARAMGPGIQQDIKELLEPMLAVGLSPAL FT TAVLYDLSRQIPQLKKDIQDGLLKMLSLVLMHKPLRHPGMPKGLAHQLASPGLTTLPEA FT SDVGSITLALRTLGSFEFEGHSLTQFVRHCADHFLNSEHKEIRMEAARTCSRLLTPSIH FT LISGHAHVVSQTAVQVVADVLSKLLVVGITDPDPDIRYCVLASLDERFDAHLAQAENLQ FT ALFVALNDQVFEIRELAICTVGRLSSMNPAFVMPFLRKMLIQILTELEHSGIGRIKEQS FT ARMLGHLVSNAPRLIRPYMEPILKALILKLKDPDPDPNPGVINNVLATIGELAQVSGLE FT MRKWVDELFIIIMDMLQDSSLLAKRQVALWTLGQLVASTGYVVEPYRKYPTLLEVLLNF FT LKTEQNQGTRREAIRVLGLLGALDPYKHKVNIGMIDQSRDASAVSLSESKSSQDSSDYS FT TSEMLVNMGNLPLDEFYPAVSMVALMRIFRDQSLSHHHTMVVQAITFIFKSLGLKCVQF FT LPQVMPTFLNVIRVCDGAIREFLFQQLGMLVSFVKSHIRPYMDEIVTLMREFWVMNTSI FT QSTIILLIEQIVVALGGEFKLYLPQLIPHMLRVFMHDNSPGRIVSIKLLAAIQLFGANL FT DDYLHLLLPPIVKLFDAPEAPLPSRKAALETVDRLTESLDFTDYASRIIHPIVRTLDQS FT PELRSTAMDTLSSLVFQLGKKYQIFIPMVNKVLVRHRINHQRYDVLICRIVKGYTLADE FT EEDPLIYQHRMLRSGQGDALASGPVETGPMKKLHVSTINLQKAWGAARRVSKDDWLEWL FT RRLSLELLKDSSSPSLRSCWALAQAYNPMARDLFNAAFVSCWSELNEDQQDELIRSIEL FT ALTSQDIAEVTQTLLNLAEFMEHSDKGPLPLRDDNGIVLLGERAAKCRAYAKALHYKEL FT EFQKGPTPAILESLISINNKLQQPEAAAGVLEYAMKHFGELEIQATWYEKLHEWEDALV FT AYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCCEKWTLVNDETQAKMARMAAAAA FT WGLGQWDSMEEYTCMIPRDTHDGAFYRAVLALHQDLFSLAQQCIDKARDLLDAELTAMA FT GESYSRAYGAMVSCHMLSELEEVIQYKLVPERREIIRQIWWERLQGCQRIVEDWQKILM FT VRSLVVSPHEDMRTWLKYASLCGKSGRLALAHKTLVLLLGVDPSRQLDHPLPTVHPQVT FT YAYMKNMWKSARKIDAFQHMQHFVQTMQQQAQHAIATEDQQHKQELHKLMARCFLKLGE FT WQLNLQGINESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYKHQNQARDEKK FT KLRHASGANITNATTAATTAATATTTASTEGSNSESEAESTENSPTPSPLQKKVTEDLS FT KTLLMYTVPAVQGFFRSISLSRGNNLQDTLRVLTLWFDYGHWPDVNEALVEGVKAIQID FT TWLQVIPQLIARIDTPRPLVGRLIHQLLTDIGRYHPQALIYPLTVASKSTTTARHNAAN FT KILKNMCEHSNTLVQQAMMVSEELIRVAILWHEMWHEGLEEASRLYFGERNVKGMFEVL FT EPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRR FT ISKQLPQLTSLELQYVSPKLLMCRDLELAVPGTYDPNQPIIRIQSIAPSLQVITSKQRP FT RKLTLMGSNGHEFVFLLKGHEDLRQDERVMQLFGLVNTLLANDPTSLRKNLSIQRYAVI FT PLSTNSGLIGWVPHCDTLHALIRDYREKKKILLNIEHRIMLRMAPDYDHLTLMQKVEVF FT EHAVNNTAGDDLAKLLWLKSPSSEVWFDRRTNYTRSLAVMSMVGYILGLGDRHPSNLML FT DRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLTNAMEVTGLDGNYRITCHTVME FT VLREHKDSVMAVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELG FT EPAHKKTGTTVPESIHSFIGDGLVKPEALNKKAIQIINRVRDKLTGRDFSHDDTLDVPT FT QVELLIKQATSHENLCQCYIGWCPFW" FT mRNA complement(join(11137066..11137500,11137658..11137708)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-007" FT /product="exosome component 10" FT /note="match: ESTs: Em:AW026595.1" FT mRNA complement(join(11166592..11167557,11168238..11168343, FT 11169347..11169427,11169706..11169786,11172909..11172974, FT 11174375..11174510,11174870..11174944,11175453..11175525, FT AL391561.20:2583..2665,AL391561.20:6825..6947, FT AL391561.20:7558..7705,AL391561.20:10077..10212, FT AL391561.20:12201..12375,AL391561.20:12589..12723, FT AL391561.20:13203..13385,AL391561.20:13583..13705, FT AL391561.20:14033..14131,AL391561.20:14434..14530, FT AL391561.20:15317..15417,AL391561.20:16108..16356, FT AL391561.20:18659..18776,AL391561.20:19930..20045, FT AL391561.20:24883..25014,AL391561.20:25112..25237, FT AL391561.20:30227..30334,AL391561.20:30547..30624, FT AL391561.20:32255..32370,AL391561.20:35705..35805, FT AL391561.20:42731..42870,AL391561.20:53021..53096, FT AL049653.7:11312..11457,AL049653.7:11595..11757, FT AL049653.7:16615..16757,AL049653.7:21366..21512, FT AL049653.7:22868..22960,AL049653.7:24366..24528, FT AL049653.7:24850..24962,AL049653.7:25453..25620, FT AL049653.7:28202..28288,AL049653.7:40722..40972, FT AL049653.7:42979..43108,AL049653.7:43354..43488, FT AL049653.7:44490..44582,AL049653.7:45452..45541, FT AL049653.7:46197..46319,AL049653.7:49897..50102, FT AL049653.7:50456..50671,AL049653.7:52357..52601, FT AL049653.7:53607..53735,AL049653.7:55168..55354, FT AL049653.7:59679..59787,AL049653.7:59873..60148, FT AL049653.7:65893..66027,AL049653.7:68046..68246, FT AL049653.7:68987..69219,AL049653.7:70539..70647, FT AL049653.7:71302..71477,AL049653.7:74499..74561)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-001" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: cDNAs: Em:AF152838.1 Em:L34075.1 Em:U88966.1" FT /note="match: ESTs: Em:AA262510.1 Em:AA282830.1 FT Em:AA725390.1 Em:AA737024.1 Em:AA767875.1 Em:AA768596.1 FT Em:AL044764.1 Em:AL047770.1 Em:AL079658.1 Em:AL120924.1 FT Em:AL704254.1 Em:AU098639.1 Em:AU135855.1 Em:AW500990.1 FT Em:AW960244.1 Em:AW976130.1 Em:BE163620.1 Em:BE539676.1 FT Em:BE560852.1 Em:BE871879.1 Em:BE884193.1 Em:BE898570.1 FT Em:BF689449.1 Em:BF761404.1 Em:BF761418.1 Em:BF871677.1 FT Em:BF893441.1 Em:BG250647.1 Em:BG420811.1 Em:BG421771.1 FT Em:BG768920.1 Em:BG900350.1 Em:BI090093.1 Em:BI258757.1 FT Em:BI460098.1 Em:BM148769.1 Em:BM149445.1 Em:BM150508.1 FT Em:BM151339.1 Em:BM153242.1 Em:BM193414.1 Em:BM461878.1 FT Em:BM470895.1 Em:BM473815.1 Em:BM721256.1 Em:BM724353.1 FT Em:BM799652.1 Em:BM999881.1 Em:BQ010420.1 Em:BQ024837.1 FT Em:BQ065337.1 Em:BQ073602.1 Em:BQ212803.1 Em:BQ219542.1 FT Em:BQ221375.1 Em:BQ440695.1 Em:BQ440903.1 Em:BU165455.1 FT Em:BU431325.1 Em:BU507234.1 Em:BU630556.1 Em:BU741782.1 FT Em:BU932965.1 Em:BX090957.1 Em:BX437773.1 Em:BX476615.1 FT Em:BX476627.1 Em:BX481180.1 Em:BX508363.1 Em:CA406561.1 FT Em:CA429532.1 Em:CA432283.1 Em:CB130997.1 Em:CB426435.1 FT Em:CD367026.1 Em:CD370823.1 Em:CD540746.1 Em:CD557696.1 FT Em:CD654263.1 Em:CD657588.1 Em:CD700609.1 Em:T05942.1" FT mRNA complement(join(11134345..11134383,11136899..11137005, FT 11137387..11137500,11137658..11137708,11139768..11139857)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-009" FT /product="exosome component 10" FT /note="match: ESTs: Em:BF807761.1" FT mRNA complement(join(11139827..11139879,11140556..11140914)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-010" FT /product="exosome component 10" FT /note="match: ESTs: Em:AL048013.1" FT polyA_site complement(11140758) FT mRNA complement(join(11126678..11126805,11128065..11128141, FT 11128702..11128763,11129616..11129787,11130957..11131045, FT 11132144..11132228,11133991..11134065,11134288..11134383, FT 11136899..11137708,11139768..11139879,11140556..11140571, FT 11140821..11140969,11141139..11141274)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-003" FT /product="exosome component 10" FT /note="match: cDNAs: Em:AK123365.1" FT mRNA complement(join(11140758..11140969,11141139..11141295, FT 11142591..11142680)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-011" FT /product="exosome component 10" FT /note="match: ESTs: Em:BX090275.1" FT mRNA join(11159732..11159967,11161858..11162108) FT /locus_tag="RP4-635E18.6-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE669601.1" FT mRNA join(11159732..11159871,11161858..11162157) FT /locus_tag="RP4-635E18.6-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI342698.1 Em:AI636898.1 FT Em:AI884748.1 Em:AW075242.1 Em:BF002112.1" FT mRNA complement(join(11126675..11126805,11128065..11128141, FT 11128702..11128763,11129616..11129787,11130957..11131030, FT 11132144..11132228,11133991..11134065,11134288..11134383, FT 11136899..11137005,11137422..11137500,11137658..11137708, FT 11139768..11139879,11140556..11140606,11140821..11140969, FT 11141139..11141295,11142745..11142935,11147505..11147648, FT 11147857..11147967,11148180..11148255,11150611..11150725, FT 11151071..11151236,11151550..11151654,11155815..11155938, FT 11158077..11158213,11159778..11159938)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-001" FT /product="exosome component 10" FT /note="match: cDNAs: Em:BC028687.1 Em:BC039901.1 FT Em:X66113.1" FT CDS complement(join(11126775..11126805,11128065..11128141, FT 11128702..11128763,11129616..11129787,11130957..11131030, FT 11132144..11132228,11133991..11134065,11134288..11134383, FT 11136899..11137005,11137422..11137500,11137658..11137708, FT 11139768..11139879,11140556..11140606,11140821..11140969, FT 11141139..11141295,11142745..11142935,11147505..11147648, FT 11147857..11147967,11148180..11148255,11150611..11150725, FT 11151071..11151236,11151550..11151654,11155815..11155938, FT 11158077..11158213,11159778..11159888)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-001" FT /standard_name="OTTHUMP00000002176" FT /product="exosome component 10" FT /note="match: proteins: Sw:P56960 Sw:Q01780 Tr:Q01780 FT Tr:Q8R2R0 Tr:Q96G78 Tr:Q9CYJ3" FT /protein_id="CAI22107.1" FT /translation="MAPPSTREPRVLSATSATKSDGEMVLPGFPDADSFVKFALGSVVA FT VTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVT FT ELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAAEY FT GKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRE FT RPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELNHFTPADAVLQKPQPQLYR FT PIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFII FT DTLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLG FT RHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWER FT GNGQPVQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWR FT DKTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQA FT REMPLLKSEVAAGVKKSGPLPSAERLENVLFGPHDCSHAPPDGYPIIPTSGSVPVQKQA FT SLFPDEKEDNLLGTTCLIATAVITLFNEPSAEDSKKGPLTVAQKKAQNIMESFENPFRM FT FLPSLGHRAPVSQAAKFDPSTKIYEISNRWKLAQVQVQKDSKEAVKKKAAEQTAAREQA FT KEACKAAAEQAISVRQQVVLENAAKKRERATSDPRTTEQKQEKKRLKISKKPKDPEPPE FT KEFTPYDYSQSDFKAFAGNSKSKVSSQFDPNKQTPSGKKCIAAKKIKQSVGNKSMSFPT FT GKSDRGFRYNWPQR" FT mRNA complement(join(11126675..11126805,11128065..11128141, FT 11128702..11128763,11129616..11129787,11130957..11131030, FT 11132144..11132228,11134288..11134383,11136899..11137005, FT 11137422..11137500,11137658..11137708,11139768..11139879, FT 11140556..11140606,11140821..11140969,11141139..11141295, FT 11142745..11142935,11147505..11147648,11147857..11147967, FT 11148180..11148255,11150611..11150725,11151071..11151236, FT 11151550..11151654,11155815..11155938,11158077..11158213, FT 11159778..11159926)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-002" FT /product="exosome component 10" FT /note="match: cDNAs: Em:L01457.1" FT CDS complement(join(11126775..11126805,11128065..11128141, FT 11128702..11128763,11129616..11129787,11130957..11131030, FT 11132144..11132228,11134288..11134383,11136899..11137005, FT 11137422..11137500,11137658..11137708,11139768..11139879, FT 11140556..11140606,11140821..11140969,11141139..11141295, FT 11142745..11142935,11147505..11147648,11147857..11147967, FT 11148180..11148255,11150611..11150725,11151071..11151236, FT 11151550..11151654,11155815..11155938,11158077..11158213, FT 11159778..11159888)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-002" FT /standard_name="OTTHUMP00000002177" FT /product="exosome component 10" FT /protein_id="CAI22106.1" FT /translation="MAPPSTREPRVLSATSATKSDGEMVLPGFPDADSFVKFALGSVVA FT VTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVT FT ELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTVVSSWNRKAAEY FT GKKAKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRE FT RPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELNHFTPADAVLQKPQPQLYR FT PIEETPCHFISSLDELVELNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFII FT DTLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLG FT RHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWER FT GNGQPVQLQVVWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWR FT DKTARREDESYGYVLPNHMMLKIAEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQA FT REMPLLKSEVAAGVKKSGPLPSAERLENVLFGPHDCSHAPPDGYPIIPTSGSVPVQKQA FT SLFPDEKEDNLLGTTCLIATAVITLFNEPSAEDSKKGPLTVAQKKAQNIMESFENPFRM FT ISNRWKLAQVQVQKDSKEAVKKKAAEQTAAREQAKEACKAAAEQAISVRQQVVLENAAK FT KRERATSDPRTTEQKQEKKRLKISKKPKDPEPPEKEFTPYDYSQSDFKAFAGNSKSKVS FT SQFDPNKQTPSGKKCIAAKKIKQSVGNKSMSFPTGKSDRGFRYNWPQR" FT mRNA complement(join(11151560..11151654,11155473..11155604, FT 11155815..11155938,11158077..11158213,11159778..11159911)) FT /gene="EXOSC10" FT /locus_tag="RP4-635E18.5-008" FT /product="exosome component 10" FT /note="match: ESTs: Em:AL710799.1" FT polyA_signal 11162132..11162137 FT polyA_site 11162157 FT polyA_site complement(11166592) FT polyA_signal complement(11166614..11166619) FT mRNA complement(join(11167342..11167557,11168238..11168343, FT 11169347..11169427,11169706..11169786,11172909..11172974, FT 11174375..11174686)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-007" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: ESTs: Em:CD244805.1" FT misc_feature 11174478 FT /note="Clone_right_end: RP4-635E18" FT mRNA complement(join(11167364..11167557,11168238..11168343, FT 11169347..11169427,11169706..11169786,11171571..11171810, FT 11172909..11172974,11174375..11174510,11174870..11174944, FT 11175453..11175584)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-006" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: ESTs: Em:BI771714.1 Em:CB115236.1 FT Em:CB119445.1 Em:CB119926.1" FT mRNA complement(join(<11169360..11169427,11169706..11169786, FT 11172909..11172974,11174375..11174510,11174870..11174944, FT 11175453..11175720)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-005" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: ESTs: Em:BE171674.1" FT CDS complement(join(<11169360..11169427,11169706..11169786, FT 11172909..11172974,11174375..11174510,11174870..11174944, FT 11175453..11175509)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-005" FT /standard_name="OTTHUMP00000001985" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /protein_id="CAI22108.1" FT /translation="MLDRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLTNAMEV FT TGLDGNYRITCHTVMEVLREHKDSVMAVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDS FT YSAGQSVEILDGVELGEPAHKKTGTTVPESIHSFIGDGLVKPEALNKKAIQIINRVR" FT misc_feature 11176479..11250003 FT /note="annotated region of clone" FT misc_feature 11178309..11178342 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(AL109811.40:102883..103848, FT AL109811.40:104529..104634,AL109811.40:105638..105718, FT AL109811.40:105997..106077,AL109811.40:109200..109265, FT AL109811.40:110666..110801,AL109811.40:111161..111235, FT AL109811.40:111744..111816,11177061..11177143, FT 11181303..11181425,11182036..11182183,11184555..11184690, FT 11186679..11186853,11187067..11187201,11187681..11187863, FT 11188061..11188183,11188511..11188609,11188912..11189008, FT 11189795..11189895,11190586..11191615)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-002" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: cDNAs: Em:AK126762.1" FT /note="match: ESTs: Em:BF913036.1 Em:BF913037.1" FT CDS complement(join(AL109811.40:103833..103848, FT AL109811.40:104529..104634,AL109811.40:105638..105718, FT AL109811.40:105997..106077,AL109811.40:109200..109265, FT AL109811.40:110666..110801,AL109811.40:111161..111235, FT AL109811.40:111744..111816,11177061..11177143, FT 11181303..11181425,11182036..11182183,11184555..11184690, FT 11186679..11186853,11187067..11187201,11187681..11187863, FT 11188061..11188183,11188511..11188609,11188912..11189008, FT 11189795..11189895,11190586..11190813)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-002" FT /standard_name="OTTHUMP00000001984" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /protein_id="CAI17227.1" FT /translation="MNFEAVLHYKHQNQARDEKKKLRHASGANITNATTAATTAATATT FT TASTEGSNSESEAESTENSPTPSPLQKKVTEDLSKTLLMYTVPAVQGFFRSISLSRGNN FT LQDTLRVLTLWFDYGHWPDVNEALVEGVKAIQIDTWLQVIPQLIARIDTPRPLVGRLIH FT QLLTDIGRYHPQALIYPLTVASKSTTTARHNAANKILKNMCEHSNTLVQQAMMVSEELI FT RVAILWHEMWHEGLEEASRLYFGERNVKGMFEVLEPLHAMMERGPQTLKETSFNQAYGR FT DLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRISKQLPQLTSLELQYVSPKLLMCRD FT LELAVPGTYDPNQPIIRIQSIAPSLQVITSKQRPRKLTLMGSNGHEFVFLLKGHEDLRQ FT DERVMQLFGLVNTLLANDPTSLRKNLSIQRYAVIPLSTNSGLIGWVPHCDTLHALIRDY FT REKKKILLNIEHRIMLRMAPDYDHLTLMQKVEVFEHAVNNTAGDDLAKLLWLKSPSSEV FT WFDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLSGKILHIDFGDCFEVAMTREKF FT PEKIPFRLTRMLTNAMEVTGLDGNYRITCHTVMEVLREHKDSVMAVLEAFVYDPLLNWR FT LMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELGEPAHKKTGTTVPESIHSFIGDGLVK FT PEALNKKAIQIINRVRDKLTGRDFSHDDTLDVPTQVELLIKQATSHENLCQCYIGWCPF FT W" FT mRNA complement(join(11199011..11199492,11199590..11199717)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-004" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: ESTs: Em:AW003328.1 Em:BF508672.1" FT misc_feature 11199967..11199997 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(11203955..11204044,11204724..11204943, FT 11205210..11205336,11209327..11209594) FT /locus_tag="RP11-99P18.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG193637.1 Em:BG198268.1 FT Em:BG198269.1" FT mRNA join(11204481..11204538,11204724..11204943, FT 11205210..11205336,11209327..11209594) FT /locus_tag="RP11-99P18.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG197159.1" FT mRNA complement(join(11191651..11193254,11194408..11194523, FT 11199361..11199492,11199590..11199715,11204705..11205082)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-003" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: ESTs: Em:AA463584.1 Em:BF920810.1 FT Em:BF921191.1 Em:BF921354.1 Em:BG014793.1 Em:BG563486.1 FT Em:BI061169.1 Em:BU629108.1 Em:N64398.1 Em:N90822.1" FT misc_feature 11230937..11230954 FT /note="Sequence from clone PCR only" FT CDS complement(join(AL109811.40:103833..103848, FT AL109811.40:104529..104634,AL109811.40:105638..105718, FT AL109811.40:105997..106077,AL109811.40:109200..109265, FT AL109811.40:110666..110801,AL109811.40:111161..111235, FT AL109811.40:111744..111816,11177061..11177143, FT 11181303..11181425,11182036..11182183,11184555..11184690, FT 11186679..11186853,11187067..11187201,11187681..11187863, FT 11188061..11188183,11188511..11188609,11188912..11189008, FT 11189795..11189895,11190586..11190834,11193137..11193254, FT 11194408..11194523,11199361..11199492,11199590..11199715, FT 11204705..11204812,11205025..11205102,11206733..11206848, FT 11210183..11210283,11217209..11217348,11227499..11227574, FT AL049653.7:11312..11457,AL049653.7:11595..11757, FT AL049653.7:16615..16757,AL049653.7:21366..21512, FT AL049653.7:22868..22960,AL049653.7:24366..24528, FT AL049653.7:24850..24962,AL049653.7:25453..25620, FT AL049653.7:28202..28288,AL049653.7:40722..40972, FT AL049653.7:42979..43108,AL049653.7:43354..43488, FT AL049653.7:44490..44582,AL049653.7:45452..45541, FT AL049653.7:46197..46319,AL049653.7:49897..50102, FT AL049653.7:50456..50671,AL049653.7:52357..52601, FT AL049653.7:53607..53735,AL049653.7:55168..55354, FT AL049653.7:59679..59787,AL049653.7:59873..60148, FT AL049653.7:65893..66027,AL049653.7:68046..68246, FT AL049653.7:68987..69219,AL049653.7:70539..70647, FT AL049653.7:71302..71463)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-001" FT /standard_name="OTTHUMP00000001983" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: proteins: Sw:P42345 Sw:P42346 Sw:Q9JLN9" FT /protein_id="CAI17228.1" FT /translation="MLGTGPAAATTAATTSSNVSVLQQFASGLKSRNEETRAKAAKELQ FT HYVTMELREMSQEESTRFYDQLNHHIFELVSSSDANERKGGILAIASLIGVEGGNATRI FT GRFANYLRNLLPSNDPVVMEMASKAIGRLAMAGDTFTAEYVEFEVKRALEWLGADRNEG FT RRHAAVLVLRELAISVPTFFFQQVQPFFDNIFVAVWDPKQAIREGAVAALRACLILTTQ FT REPKEMQKPQWYRHTFEEAEKGFDETLAKEKGMNRDDRIHGALLILNELVRISSMEGER FT LREEMEEITQQQLVHDKYCKDLMGFGTKPRHITPFTSFQAVQPQQSNALVGLLGYSSHQ FT GLMGFGTSPSPAKSTLVESRCCRDLMEEKFDQVCQWVLKCRNSKNSLIQMTILNLLPRL FT AAFRPSAFTDTQYLQDTMNHVLSCVKKEKERTAAFQALGLLSVAVRSEFKVYLPRVLDI FT IRAALPPKDFAHKRQKAMQVDATVFTCISMLARAMGPGIQQDIKELLEPMLAVGLSPAL FT TAVLYDLSRQIPQLKKDIQDGLLKMLSLVLMHKPLRHPGMPKGLAHQLASPGLTTLPEA FT SDVGSITLALRTLGSFEFEGHSLTQFVRHCADHFLNSEHKEIRMEAARTCSRLLTPSIH FT LISGHAHVVSQTAVQVVADVLSKLLVVGITDPDPDIRYCVLASLDERFDAHLAQAENLQ FT ALFVALNDQVFEIRELAICTVGRLSSMNPAFVMPFLRKMLIQILTELEHSGIGRIKEQS FT ARMLGHLVSNAPRLIRPYMEPILKALILKLKDPDPDPNPGVINNVLATIGELAQVSGLE FT MRKWVDELFIIIMDMLQDSSLLAKRQVALWTLGQLVASTGYVVEPYRKYPTLLEVLLNF FT LKTEQNQGTRREAIRVLGLLGALDPYKHKVNIGMIDQSRDASAVSLSESKSSQDSSDYS FT TSEMLVNMGNLPLDEFYPAVSMVALMRIFRDQSLSHHHTMVVQAITFIFKSLGLKCVQF FT LPQVMPTFLNVIRVCDGAIREFLFQQLGMLVSFVKSHIRPYMDEIVTLMREFWVMNTSI FT QSTIILLIEQIVVALGGEFKLYLPQLIPHMLRVFMHDNSPGRIVSIKLLAAIQLFGANL FT DDYLHLLLPPIVKLFDAPEAPLPSRKAALETVDRLTESLDFTDYASRIIHPIVRTLDQS FT PELRSTAMDTLSSLVFQLGKKYQIFIPMVNKVLVRHRINHQRYDVLICRIVKGYTLADE FT EEDPLIYQHRMLRSGQGDALASGPVETGPMKKLHVSTINLQKAWGAARRVSKDDWLEWL FT RRLSLELLKDSSSPSLRSCWALAQAYNPMARDLFNAAFVSCWSELNEDQQDELIRSIEL FT ALTSQDIAEVTQTLLNLAEFMEHSDKGPLPLRDDNGIVLLGERAAKCRAYAKALHYKEL FT EFQKGPTPAILESLISINNKLQQPEAAAGVLEYAMKHFGELEIQATWYEKLHEWEDALV FT AYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCCEKWTLVNDETQAKMARMAAAAA FT WGLGQWDSMEEYTCMIPRDTHDGAFYRAVLALHQDLFSLAQQCIDKARDLLDAELTAMA FT GESYSRAYGAMVSCHMLSELEEVIQYKLVPERREIIRQIWWERLQGCQRIVEDWQKILM FT VRSLVVSPHEDMRTWLKYASLCGKSGRLALAHKTLVLLLGVDPSRQLDHPLPTVHPQVT FT YAYMKNMWKSARKIDAFQHMQHFVQTMQQQAQHAIATEDQQHKQELHKLMARCFLKLGE FT WQLNLQGINESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYKHQNQARDEKK FT KLRHASGANITNATTAATTAATATTTASTEGSNSESEAESTENSPTPSPLQKKVTEDLS FT KTLLMYTVPAVQGFFRSISLSRGNNLQDTLRVLTLWFDYGHWPDVNEALVEGVKAIQID FT TWLQVIPQLIARIDTPRPLVGRLIHQLLTDIGRYHPQALIYPLTVASKSTTTARHNAAN FT KILKNMCEHSNTLVQQAMMVSEELIRVAILWHEMWHEGLEEASRLYFGERNVKGMFEVL FT EPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRR FT ISKQLPQLTSLELQYVSPKLLMCRDLELAVPGTYDPNQPIIRIQSIAPSLQVITSKQRP FT RKLTLMGSNGHEFVFLLKGHEDLRQDERVMQLFGLVNTLLANDPTSLRKNLSIQRYAVI FT PLSTNSGLIGWVPHCDTLHALIRDYREKKKILLNIEHRIMLRMAPDYDHLTLMQKVEVF FT EHAVNNTAGDDLAKLLWLKSPSSEVWFDRRTNYTRSLAVMSMVGYILGLGDRHPSNLML FT DRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLTNAMEVTGLDGNYRITCHTVME FT VLREHKDSVMAVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELG FT EPAHKKTGTTVPESIHSFIGDGLVKPEALNKKAIQIINRVRDKLTGRDFSHDDTLDVPT FT QVELLIKQATSHENLCQCYIGWCPFW" FT misc_feature 11246004 FT /note="Clone_left_end: RP4-647M16" FT mRNA complement(join(AL109811.40:102883..103848, FT AL109811.40:104529..104634,AL109811.40:105638..105718, FT AL109811.40:105997..106077,AL109811.40:109200..109265, FT AL109811.40:110666..110801,AL109811.40:111161..111235, FT AL109811.40:111744..111816,11177061..11177143, FT 11181303..11181425,11182036..11182183,11184555..11184690, FT 11186679..11186853,11187067..11187201,11187681..11187863, FT 11188061..11188183,11188511..11188609,11188912..11189008, FT 11189795..11189895,11190586..11190834,11193137..11193254, FT 11194408..11194523,11199361..11199492,11199590..11199715, FT 11204705..11204812,11205025..11205102,11206733..11206848, FT 11210183..11210283,11217209..11217348,11227499..11227574, FT AL049653.7:11312..11457,AL049653.7:11595..11757, FT AL049653.7:16615..16757,AL049653.7:21366..21512, FT AL049653.7:22868..22960,AL049653.7:24366..24528, FT AL049653.7:24850..24962,AL049653.7:25453..25620, FT AL049653.7:28202..28288,AL049653.7:40722..40972, FT AL049653.7:42979..43108,AL049653.7:43354..43488, FT AL049653.7:44490..44582,AL049653.7:45452..45541, FT AL049653.7:46197..46319,AL049653.7:49897..50102, FT AL049653.7:50456..50671,AL049653.7:52357..52601, FT AL049653.7:53607..53735,AL049653.7:55168..55354, FT AL049653.7:59679..59787,AL049653.7:59873..60148, FT AL049653.7:65893..66027,AL049653.7:68046..68246, FT AL049653.7:68987..69219,AL049653.7:70539..70647, FT AL049653.7:71302..71477,AL049653.7:74499..74561)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-001" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: cDNAs: Em:AF152838.1 Em:L34075.1 Em:U88966.1" FT /note="match: ESTs: Em:AA262510.1 Em:AA282830.1 FT Em:AA725390.1 Em:AA737024.1 Em:AA767875.1 Em:AA768596.1 FT Em:AL044764.1 Em:AL047770.1 Em:AL079658.1 Em:AL120924.1 FT Em:AL704254.1 Em:AU098639.1 Em:AU135855.1 Em:AW500990.1 FT Em:AW960244.1 Em:AW976130.1 Em:BE163620.1 Em:BE539676.1 FT Em:BE560852.1 Em:BE871879.1 Em:BE884193.1 Em:BE898570.1 FT Em:BF689449.1 Em:BF761404.1 Em:BF761418.1 Em:BF871677.1 FT Em:BF893441.1 Em:BG250647.1 Em:BG420811.1 Em:BG421771.1 FT Em:BG768920.1 Em:BG900350.1 Em:BI090093.1 Em:BI258757.1 FT Em:BI460098.1 Em:BM148769.1 Em:BM149445.1 Em:BM150508.1 FT Em:BM151339.1 Em:BM153242.1 Em:BM193414.1 Em:BM461878.1 FT Em:BM470895.1 Em:BM473815.1 Em:BM721256.1 Em:BM724353.1 FT Em:BM799652.1 Em:BM999881.1 Em:BQ010420.1 Em:BQ024837.1 FT Em:BQ065337.1 Em:BQ073602.1 Em:BQ212803.1 Em:BQ219542.1 FT Em:BQ221375.1 Em:BQ440695.1 Em:BQ440903.1 Em:BU165455.1 FT Em:BU431325.1 Em:BU507234.1 Em:BU630556.1 Em:BU741782.1 FT Em:BU932965.1 Em:BX090957.1 Em:BX437773.1 Em:BX476615.1 FT Em:BX476627.1 Em:BX481180.1 Em:BX508363.1 Em:CA406561.1 FT Em:CA429532.1 Em:CA432283.1 Em:CB130997.1 Em:CB426435.1 FT Em:CD367026.1 Em:CD370823.1 Em:CD540746.1 Em:CD557696.1 FT Em:CD654263.1 Em:CD657588.1 Em:CD700609.1 Em:T05942.1" FT mRNA join(11249398..11250003,AL049653.7:2001..2009, FT AL049653.7:4324..4424,AL049653.7:5634..5828, FT AL049653.7:6515..6713,AL049653.7:6908..8035) FT /gene="ANGPTL7" FT /locus_tag="RP4-647M16.2-001" FT /product="angiopoietin-like 7" FT /note="match: cDNAs: Em:AK031675.1 Em:BC001881.1 FT Em:BC023373.1 Em:BT009802.1 Em:Y16132.1" FT /note="match: ESTs: Em:AI126635.1 Em:AI278780.1 FT Em:BE383867.1 Em:BE384318.1 Em:BE390279.1 Em:BE550259.1 FT Em:BE730129.1 Em:BI823300.1 Em:BM682673.1 Em:BM686602.1 FT Em:BM687406.1 Em:BM687638.1 Em:BM720771.1 Em:BM723480.1 FT Em:BM906759.1 Em:BQ722925.1 Em:BQ889236.1 Em:BQ898121.1 FT Em:BU727347.1 Em:BU727711.1 Em:BX117785.1 Em:BX483048.1 FT Em:BX506170.1 Em:CA391009.1 Em:CA413386.1 Em:CD172429.1 FT Em:CD513179.1 Em:CD517563.1 Em:CD517580.1 Em:CD518252.1 FT Em:CD519167.1 Em:CD558518.1 Em:CD558561.1 Em:CD677278.1 FT Em:CD677906.1 Em:CD678922.1 Em:CD678923.1 Em:CD679151.1 FT Em:CD679305.1" FT CDS join(11249637..11250003,AL049653.7:2001..2009, FT AL049653.7:4324..4424,AL049653.7:5634..5828, FT AL049653.7:6515..6713,AL049653.7:6908..7077) FT /gene="ANGPTL7" FT /locus_tag="RP4-647M16.2-001" FT /standard_name="OTTHUMP00000001986" FT /product="angiopoietin-like 7" FT /note="match: proteins: Sw:O43827 Sw:O43827" FT /protein_id="CAI17229.1" FT /translation="MLKKPLSAVTWLCIFIVAFVSHPAWLQKLSKHKTPAQPQLKAANC FT CEEVKELKAQVANLSSLLSELNKKQERDWVSVVMQVMELESNSKRMESRLTDAESKYSE FT MNNQIDIMQLQAAQTVTQTSADAIYDCSSLYQKNYRISGVYKLPPDDFLGSPELEVFCD FT METSGGGWTIIQRRKSGLVSFYRDWKQYKQGFGSIRGDFWLGNEHIHRLSRQPTRLRVE FT MEDWEGNLRYAEYSHFVLGNELNSYRLFLGNYTGNVGNDALQYHNNTAFSTKDKDNDNC FT LDKCAQLRKGGYWYNCCTDSNLNGVYYRLGEHNKHLDGITWYGWHGSTYSLKRVEMKIR FT PEDFKP" FT misc_feature 11250004..11326542 FT /note="annotated region of clone" FT mRNA join(11253684..11253831,11254583..11254716, FT 11254911..11255235) FT /gene="ANGPTL7" FT /locus_tag="RP4-647M16.2-002" FT /product="angiopoietin-like 7" FT /note="match: ESTs: Em:CK004235.1" FT polyA_signal 11256017..11256022 FT polyA_site 11256038 FT CDS 11293020..11293169 FT /pseudo FT /locus_tag="RP4-647M16.1-001" FT /product="ribosomal protein L39 (RPL39) pseudogene" FT /note="match: proteins: Sw:O16130 Sw:P51425 Sw:P62893 FT Sw:Q90YS9 Sw:Q96EH5 Sw:Q96W55 Sw:Q98TF5 Tr:Q711N8 Tr:Q86QR6 FT Tr:Q8ISP8 Tr:Q9CQD0" FT CDS complement(join(AL109811.40:103833..103848, FT AL109811.40:104529..104634,AL109811.40:105638..105718, FT AL109811.40:105997..106077,AL109811.40:109200..109265, FT AL109811.40:110666..110801,AL109811.40:111161..111235, FT AL109811.40:111744..111816,AL391561.20:2583..2665, FT AL391561.20:6825..6947,AL391561.20:7558..7705, FT AL391561.20:10077..10212,AL391561.20:12201..12375, FT AL391561.20:12589..12723,AL391561.20:13203..13385, FT AL391561.20:13583..13705,AL391561.20:14033..14131, FT AL391561.20:14434..14530,AL391561.20:15317..15417, FT AL391561.20:16108..16356,AL391561.20:18659..18776, FT AL391561.20:19930..20045,AL391561.20:24883..25014, FT AL391561.20:25112..25237,AL391561.20:30227..30334, FT AL391561.20:30547..30624,AL391561.20:32255..32370, FT AL391561.20:35705..35805,AL391561.20:42731..42870, FT AL391561.20:53021..53096,11259315..11259460, FT 11259598..11259760,11264618..11264760,11269369..11269515, FT 11270871..11270963,11272369..11272531,11272853..11272965, FT 11273456..11273623,11276205..11276291,11288725..11288975, FT 11290982..11291111,11291357..11291491,11292493..11292585, FT 11293455..11293544,11294200..11294322,11297900..11298105, FT 11298459..11298674,11300360..11300604,11301610..11301738, FT 11303171..11303357,11307682..11307790,11307876..11308151, FT 11313896..11314030,11316049..11316249,11316990..11317222, FT 11318542..11318650,11319305..11319466)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-001" FT /standard_name="OTTHUMP00000001983" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: proteins: Sw:P42345 Sw:P42346 Sw:Q9JLN9" FT /protein_id="CAI22145.1" FT /translation="MLGTGPAAATTAATTSSNVSVLQQFASGLKSRNEETRAKAAKELQ FT HYVTMELREMSQEESTRFYDQLNHHIFELVSSSDANERKGGILAIASLIGVEGGNATRI FT GRFANYLRNLLPSNDPVVMEMASKAIGRLAMAGDTFTAEYVEFEVKRALEWLGADRNEG FT RRHAAVLVLRELAISVPTFFFQQVQPFFDNIFVAVWDPKQAIREGAVAALRACLILTTQ FT REPKEMQKPQWYRHTFEEAEKGFDETLAKEKGMNRDDRIHGALLILNELVRISSMEGER FT LREEMEEITQQQLVHDKYCKDLMGFGTKPRHITPFTSFQAVQPQQSNALVGLLGYSSHQ FT GLMGFGTSPSPAKSTLVESRCCRDLMEEKFDQVCQWVLKCRNSKNSLIQMTILNLLPRL FT AAFRPSAFTDTQYLQDTMNHVLSCVKKEKERTAAFQALGLLSVAVRSEFKVYLPRVLDI FT IRAALPPKDFAHKRQKAMQVDATVFTCISMLARAMGPGIQQDIKELLEPMLAVGLSPAL FT TAVLYDLSRQIPQLKKDIQDGLLKMLSLVLMHKPLRHPGMPKGLAHQLASPGLTTLPEA FT SDVGSITLALRTLGSFEFEGHSLTQFVRHCADHFLNSEHKEIRMEAARTCSRLLTPSIH FT LISGHAHVVSQTAVQVVADVLSKLLVVGITDPDPDIRYCVLASLDERFDAHLAQAENLQ FT ALFVALNDQVFEIRELAICTVGRLSSMNPAFVMPFLRKMLIQILTELEHSGIGRIKEQS FT ARMLGHLVSNAPRLIRPYMEPILKALILKLKDPDPDPNPGVINNVLATIGELAQVSGLE FT MRKWVDELFIIIMDMLQDSSLLAKRQVALWTLGQLVASTGYVVEPYRKYPTLLEVLLNF FT LKTEQNQGTRREAIRVLGLLGALDPYKHKVNIGMIDQSRDASAVSLSESKSSQDSSDYS FT TSEMLVNMGNLPLDEFYPAVSMVALMRIFRDQSLSHHHTMVVQAITFIFKSLGLKCVQF FT LPQVMPTFLNVIRVCDGAIREFLFQQLGMLVSFVKSHIRPYMDEIVTLMREFWVMNTSI FT QSTIILLIEQIVVALGGEFKLYLPQLIPHMLRVFMHDNSPGRIVSIKLLAAIQLFGANL FT DDYLHLLLPPIVKLFDAPEAPLPSRKAALETVDRLTESLDFTDYASRIIHPIVRTLDQS FT PELRSTAMDTLSSLVFQLGKKYQIFIPMVNKVLVRHRINHQRYDVLICRIVKGYTLADE FT EEDPLIYQHRMLRSGQGDALASGPVETGPMKKLHVSTINLQKAWGAARRVSKDDWLEWL FT RRLSLELLKDSSSPSLRSCWALAQAYNPMARDLFNAAFVSCWSELNEDQQDELIRSIEL FT ALTSQDIAEVTQTLLNLAEFMEHSDKGPLPLRDDNGIVLLGERAAKCRAYAKALHYKEL FT EFQKGPTPAILESLISINNKLQQPEAAAGVLEYAMKHFGELEIQATWYEKLHEWEDALV FT AYDKKMDTNKDDPELMLGRMRCLEALGEWGQLHQQCCEKWTLVNDETQAKMARMAAAAA FT WGLGQWDSMEEYTCMIPRDTHDGAFYRAVLALHQDLFSLAQQCIDKARDLLDAELTAMA FT GESYSRAYGAMVSCHMLSELEEVIQYKLVPERREIIRQIWWERLQGCQRIVEDWQKILM FT VRSLVVSPHEDMRTWLKYASLCGKSGRLALAHKTLVLLLGVDPSRQLDHPLPTVHPQVT FT YAYMKNMWKSARKIDAFQHMQHFVQTMQQQAQHAIATEDQQHKQELHKLMARCFLKLGE FT WQLNLQGINESTIPKVLQYYSAATEHDRSWYKAWHAWAVMNFEAVLHYKHQNQARDEKK FT KLRHASGANITNATTAATTAATATTTASTEGSNSESEAESTENSPTPSPLQKKVTEDLS FT KTLLMYTVPAVQGFFRSISLSRGNNLQDTLRVLTLWFDYGHWPDVNEALVEGVKAIQID FT TWLQVIPQLIARIDTPRPLVGRLIHQLLTDIGRYHPQALIYPLTVASKSTTTARHNAAN FT KILKNMCEHSNTLVQQAMMVSEELIRVAILWHEMWHEGLEEASRLYFGERNVKGMFEVL FT EPLHAMMERGPQTLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRR FT ISKQLPQLTSLELQYVSPKLLMCRDLELAVPGTYDPNQPIIRIQSIAPSLQVITSKQRP FT RKLTLMGSNGHEFVFLLKGHEDLRQDERVMQLFGLVNTLLANDPTSLRKNLSIQRYAVI FT PLSTNSGLIGWVPHCDTLHALIRDYREKKKILLNIEHRIMLRMAPDYDHLTLMQKVEVF FT EHAVNNTAGDDLAKLLWLKSPSSEVWFDRRTNYTRSLAVMSMVGYILGLGDRHPSNLML FT DRLSGKILHIDFGDCFEVAMTREKFPEKIPFRLTRMLTNAMEVTGLDGNYRITCHTVME FT VLREHKDSVMAVLEAFVYDPLLNWRLMDTNTKGNKRSRTRTDSYSAGQSVEILDGVELG FT EPAHKKTGTTVPESIHSFIGDGLVKPEALNKKAIQIINRVRDKLTGRDFSHDDTLDVPT FT QVELLIKQATSHENLCQCYIGWCPFW" FT mRNA complement(join(AL109811.40:102883..103848, FT AL109811.40:104529..104634,AL109811.40:105638..105718, FT AL109811.40:105997..106077,AL109811.40:109200..109265, FT AL109811.40:110666..110801,AL109811.40:111161..111235, FT AL109811.40:111744..111816,AL391561.20:2583..2665, FT AL391561.20:6825..6947,AL391561.20:7558..7705, FT AL391561.20:10077..10212,AL391561.20:12201..12375, FT AL391561.20:12589..12723,AL391561.20:13203..13385, FT AL391561.20:13583..13705,AL391561.20:14033..14131, FT AL391561.20:14434..14530,AL391561.20:15317..15417, FT AL391561.20:16108..16356,AL391561.20:18659..18776, FT AL391561.20:19930..20045,AL391561.20:24883..25014, FT AL391561.20:25112..25237,AL391561.20:30227..30334, FT AL391561.20:30547..30624,AL391561.20:32255..32370, FT AL391561.20:35705..35805,AL391561.20:42731..42870, FT AL391561.20:53021..53096,11259315..11259460, FT 11259598..11259760,11264618..11264760,11269369..11269515, FT 11270871..11270963,11272369..11272531,11272853..11272965, FT 11273456..11273623,11276205..11276291,11288725..11288975, FT 11290982..11291111,11291357..11291491,11292493..11292585, FT 11293455..11293544,11294200..11294322,11297900..11298105, FT 11298459..11298674,11300360..11300604,11301610..11301738, FT 11303171..11303357,11307682..11307790,11307876..11308151, FT 11313896..11314030,11316049..11316249,11316990..11317222, FT 11318542..11318650,11319305..11319480,11322502..11322564)) FT /gene="FRAP1" FT /locus_tag="RP4-635E18.1-001" FT /product="FK506 binding protein 12-rapamycin associated FT protein 1" FT /note="match: cDNAs: Em:AF152838.1 Em:L34075.1 Em:U88966.1" FT /note="match: ESTs: Em:AA262510.1 Em:AA282830.1 FT Em:AA725390.1 Em:AA737024.1 Em:AA767875.1 Em:AA768596.1 FT Em:AL044764.1 Em:AL047770.1 Em:AL079658.1 Em:AL120924.1 FT Em:AL704254.1 Em:AU098639.1 Em:AU135855.1 Em:AW500990.1 FT Em:AW960244.1 Em:AW976130.1 Em:BE163620.1 Em:BE539676.1 FT Em:BE560852.1 Em:BE871879.1 Em:BE884193.1 Em:BE898570.1 FT Em:BF689449.1 Em:BF761404.1 Em:BF761418.1 Em:BF871677.1 FT Em:BF893441.1 Em:BG250647.1 Em:BG420811.1 Em:BG421771.1 FT Em:BG768920.1 Em:BG900350.1 Em:BI090093.1 Em:BI258757.1 FT Em:BI460098.1 Em:BM148769.1 Em:BM149445.1 Em:BM150508.1 FT Em:BM151339.1 Em:BM153242.1 Em:BM193414.1 Em:BM461878.1 FT Em:BM470895.1 Em:BM473815.1 Em:BM721256.1 Em:BM724353.1 FT Em:BM799652.1 Em:BM999881.1 Em:BQ010420.1 Em:BQ024837.1 FT Em:BQ065337.1 Em:BQ073602.1 Em:BQ212803.1 Em:BQ219542.1 FT Em:BQ221375.1 Em:BQ440695.1 Em:BQ440903.1 Em:BU165455.1 FT Em:BU431325.1 Em:BU507234.1 Em:BU630556.1 Em:BU741782.1 FT Em:BU932965.1 Em:BX090957.1 Em:BX437773.1 Em:BX476615.1 FT Em:BX476627.1 Em:BX481180.1 Em:BX508363.1 Em:CA406561.1 FT Em:CA429532.1 Em:CA432283.1 Em:CB130997.1 Em:CB426435.1 FT Em:CD367026.1 Em:CD370823.1 Em:CD540746.1 Em:CD557696.1 FT Em:CD654263.1 Em:CD657588.1 Em:CD700609.1 Em:T05942.1" FT mRNA join(AL391561.20:74920..75525,11250004..11250012, FT 11252327..11252427,11253637..11253831,11254518..11254716, FT 11254911..11256038) FT /gene="ANGPTL7" FT /locus_tag="RP4-647M16.2-001" FT /product="angiopoietin-like 7" FT /note="match: cDNAs: Em:AK031675.1 Em:BC001881.1 FT Em:BC023373.1 Em:BT009802.1 Em:Y16132.1" FT /note="match: ESTs: Em:AI126635.1 Em:AI278780.1 FT Em:BE383867.1 Em:BE384318.1 Em:BE390279.1 Em:BE550259.1 FT Em:BE730129.1 Em:BI823300.1 Em:BM682673.1 Em:BM686602.1 FT Em:BM687406.1 Em:BM687638.1 Em:BM720771.1 Em:BM723480.1 FT Em:BM906759.1 Em:BQ722925.1 Em:BQ889236.1 Em:BQ898121.1 FT Em:BU727347.1 Em:BU727711.1 Em:BX117785.1 Em:BX483048.1 FT Em:BX506170.1 Em:CA391009.1 Em:CA413386.1 Em:CD172429.1 FT Em:CD513179.1 Em:CD517563.1 Em:CD517580.1 Em:CD518252.1 FT Em:CD519167.1 Em:CD558518.1 Em:CD558561.1 Em:CD677278.1 FT Em:CD677906.1 Em:CD678922.1 Em:CD678923.1 Em:CD679151.1 FT Em:CD679305.1" FT CDS join(AL391561.20:75159..75525,11250004..11250012, FT 11252327..11252427,11253637..11253831,11254518..11254716, FT 11254911..11255080) FT /gene="ANGPTL7" FT /locus_tag="RP4-647M16.2-001" FT /standard_name="OTTHUMP00000001986" FT /product="angiopoietin-like 7" FT /note="match: proteins: Sw:O43827 Sw:O43827" FT /protein_id="CAB44734.1" FT /translation="MLKKPLSAVTWLCIFIVAFVSHPAWLQKLSKHKTPAQPQLKAANC FT CEEVKELKAQVANLSSLLSELNKKQERDWVSVVMQVMELESNSKRMESRLTDAESKYSE FT MNNQIDIMQLQAAQTVTQTSADAIYDCSSLYQKNYRISGVYKLPPDDFLGSPELEVFCD FT METSGGGWTIIQRRKSGLVSFYRDWKQYKQGFGSIRGDFWLGNEHIHRLSRQPTRLRVE FT MEDWEGNLRYAEYSHFVLGNELNSYRLFLGNYTGNVGNDALQYHNNTAFSTKDKDNDNC FT LDKCAQLRKGGYWYNCCTDSNLNGVYYRLGEHNKHLDGITWYGWHGSTYSLKRVEMKIR FT PEDFKP" FT misc_feature 11326543..11445410 FT /note="annotated region of clone" FT mRNA join(11333263..11334117,11345701..11348491) FT /gene="UBIAD1" FT /locus_tag="RP4-796F18.1-001" FT /product="UbiA prenyltransferase domain containing 1" FT /note="match: cDNAs: Em:AF117064.1 Em:AK074890.1 FT Em:BC004468.1 Em:BT006832.1" FT /note="match: ESTs: Em:AA505091.1 Em:AA758853.1 FT Em:AI076214.1 Em:AI266255.1 Em:AI302710.1 Em:AI362648.1 FT Em:AL516789.2 Em:AL558826.2 Em:AW013896.1 Em:AW958856.1 FT Em:BE256713.1 Em:BE312414.1 Em:BE741130.1 Em:BE746381.1 FT Em:BF433587.1 Em:BG026983.1 Em:BG249227.1 Em:BG472901.1 FT Em:BG674299.1 Em:BG828923.1 Em:BI093481.1 Em:BI196621.1 FT Em:BI861804.1 Em:BM551428.1 Em:BM727602.1 Em:BM920345.1 FT Em:BQ674860.1 Em:BQ682119.1 Em:BQ941140.1 Em:BQ961662.1 FT Em:BX507524.1 Em:CA777774.1 Em:N30416.1 Em:N79746.1" FT mRNA join(11333585..11334117,11354930..11355112) FT /gene="UBIAD1" FT /locus_tag="RP4-796F18.1-003" FT /product="UbiA prenyltransferase domain containing 1" FT /note="match: ESTs: Em:BF310088.1" FT CDS join(11333589..11334117,11345701..11346188) FT /gene="UBIAD1" FT /locus_tag="RP4-796F18.1-001" FT /standard_name="OTTHUMP00000002069" FT /product="UbiA prenyltransferase domain containing 1" FT /note="match: proteins: Sw:Q9DC60 Sw:Q9Y5Z9" FT /protein_id="CAI22837.1" FT /translation="MAASQVLGEKINILSGETVKAGDRDPLGNDCPEQDRLPQRSWRQK FT CASYVLALRPWSFSASLTPVALGSALAYRSHGVLDPRLLVGCAVAVLAVHGAGNLVNTY FT YDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEHLALI FT YFGGLSGSFLYTGGIGFKYVALGDLIILITFGPLAVMFAYAIQVGSLAIFPLVYAIPLA FT LSTEAILHSNNTRDMESDREAGIVTLAILIGPTFSYILYNTLLFLPYLVFSILATHCTI FT SLALPLLTIPMAFSLERQFRSQAFNKLPQRTAKLNLLLGLFYVFGIILAPAGSLPKI" FT CDS join(11333589..11334117,11354930..11354940) FT /gene="UBIAD1" FT /locus_tag="RP4-796F18.1-003" FT /standard_name="OTTHUMP00000002070" FT /product="UbiA prenyltransferase domain containing 1" FT /protein_id="CAI22838.1" FT /translation="MAASQVLGEKINILSGETVKAGDRDPLGNDCPEQDRLPQRSWRQK FT CASYVLALRPWSFSASLTPVALGSALAYRSHGVLDPRLLVGCAVAVLAVHGAGNLVNTY FT YDFSKGIDHKKSDDRTLVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSPLKLEHLALI FT YFGGLSGSFLYTGVLI" FT mRNA join(11333946..11334117,11345701..11345884, FT 11353517..11353683,11354930..11355297) FT /gene="UBIAD1" FT /locus_tag="RP4-796F18.1-004" FT /product="UbiA prenyltransferase domain containing 1" FT /note="match: ESTs: Em:BF942953.1 Em:BF942964.1 FT Em:BF944548.1 Em:BF944549.1 Em:BF944551.1 Em:BF944596.1 FT Em:BF944605.1 Em:BF944704.1 Em:BF944723.1 Em:BF950129.1" FT mRNA join(11333991..11334117,11345701..11345789, FT 11354930..11356106) FT /gene="UBIAD1" FT /locus_tag="RP4-796F18.1-002" FT /product="UbiA prenyltransferase domain containing 1" FT /note="match: ESTs: Em:AW801270.1 Em:AW801299.1 FT Em:AW801306.1 Em:AW801307.1 Em:AW801324.1 Em:AW801351.1 FT Em:AW801356.1 Em:AW801357.1 Em:AW801358.1 Em:AW801420.1 FT Em:AW801425.1 Em:AW801427.1 Em:AW801428.1 Em:AW801429.1 FT Em:AW801558.1 Em:AW801609.1 Em:BE891657.1 Em:H86002.1 FT Em:W92289.1" FT CDS complement(join(11338673..11338925,11339225..11339408)) FT /pseudo FT /locus_tag="RP4-796F18.2-001" FT /product="ubiquitin-conjugating enzyme E2 variant 2 FT (UBE2V2) pseudogene" FT /note="match: proteins: Sw:Q15819 Sw:Q9D2M8 Sw:Q9D2M8 FT Sw:Q9D2M8 Sw:Q9D2M8 Tr:Q7ZYP0 Tr:Q862Q9" FT polyA_signal 11348464..11348469 FT polyA_site 11348491 FT misc_feature 11450457 FT /note="Clone_left_end: RP11-149P14" FT misc_feature 11454457..11562577 FT /note="annotated region of clone" FT misc_feature 11457106..11457142 FT /note="Sequence from overlapping clone RP11-192B7 FT (AL592314). Assembly confirmed by restriction digest" FT misc_feature 11471514..11471579 FT /note="Sequence from overlapping clone RP11-192B7 FT (AL592314). Assembly confirmed by restriction digest" FT CDS complement(11485315..11485891) FT /pseudo FT /locus_tag="RP11-149P14.1-001" FT /product="pseudogene similar to part of cytochrome b" FT /note="match: proteins: Sw:P92583 Sw:Q34952 Sw:Q9G9J7 FT Tr:O21789 Tr:Q35235 Tr:Q85PN5 Tr:Q85PP3 Tr:Q8HCJ4 Tr:Q8SF82 FT Tr:Q8SJ50 Tr:Q9XP71" FT misc_feature 11501172..11501174 FT /note="Sequence from overlapping clone RP11-192B7 FT (AL592314). Assembly confirmed by restriction digest" FT misc_feature 11505219..11505327 FT /note="Sequence from overlapping clone RP11-192B7 FT (AL592314). Assembly confirmed by restriction digest" FT misc_feature 11509078 FT /note="Clone_right_end: RP11-192B7" FT misc_feature 11536860..11536870 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 11537236..11537359 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(11539223..11539429,11541315..11542017) FT /gene="PTCHD2" FT /locus_tag="RP1-69M21.1-003" FT /product="patched domain containing 2" FT /note="match: ESTs: Em:BU170953.1" FT mRNA join(<11539295..11539429,11561047..11562145, FT complement(AL031735.9:124944..125163), FT complement(AL031735.9:113315..113451), FT complement(AL031735.9:112338..112472), FT complement(AL031735.9:111680..111840), FT complement(AL031735.9:110239..110378), FT complement(AL031735.9:108338..108486), FT complement(AL031735.9:107961..108122), FT complement(AL031735.9:106993..107154), FT complement(AL031735.9:103786..103899), FT complement(AL031735.9:102529..102665), FT complement(AL031735.9:101006..101190), FT complement(AL031735.9:98155..98285), FT complement(AL031735.9:97882..98054), FT complement(AL031735.9:96808..96934), FT complement(AL031735.9:96131..96276), FT complement(AL031735.9:93301..93460), FT complement(AL031735.9:92717..92830), FT complement(AL031735.9:92197..92363), FT complement(AL031735.9:90257..91517)) FT /gene="PTCHD2" FT /locus_tag="RP1-69M21.1-001" FT /product="patched domain containing 2" FT /note="match: cDNAs: Em:AB037758.1 Em:AK090326.1 FT Em:AL117236.1" FT /note="match: ESTs: Em:AA339510.1 Em:AA629570.1 FT Em:AI024155.1 Em:AI140704.1 Em:AW138274.1 Em:AW206105.1 FT Em:BB850104.1 Em:BE465007.1 Em:BE982863.1 Em:BF567742.1 FT Em:BG910338.1 Em:BI196393.1 Em:BM678348.1 Em:BM692049.1 FT Em:BQ339453.1 Em:BU614887.1 Em:BU701426.1 Em:BU728807.1 FT Em:BU733859.1 Em:BX104445.1 Em:BY234277.1 Em:R44615.1" FT CDS join(<11539295..11539429,11561047..11562145, FT complement(AL031735.9:124944..125163), FT complement(AL031735.9:113315..113451), FT complement(AL031735.9:112338..112472), FT complement(AL031735.9:111680..111840), FT complement(AL031735.9:110239..110378), FT complement(AL031735.9:108338..108486), FT complement(AL031735.9:107961..108122), FT complement(AL031735.9:106993..107154), FT complement(AL031735.9:103786..103899), FT complement(AL031735.9:102529..102665), FT complement(AL031735.9:101006..101190), FT complement(AL031735.9:98155..98285), FT complement(AL031735.9:97882..98054), FT complement(AL031735.9:96808..96934), FT complement(AL031735.9:96131..96276), FT complement(AL031735.9:93301..93460), FT complement(AL031735.9:92717..92830), FT complement(AL031735.9:92197..92363), FT complement(AL031735.9:91155..91517)) FT /codon_start=1 FT /gene="PTCHD2" FT /locus_tag="RP1-69M21.1-001" FT /standard_name="OTTHUMP00000002067" FT /product="patched domain containing 2" FT /note="match: proteins: Tr:Q9P2K9" FT /protein_id="CAH70606.1" FT /translation="AAPRSFPLRLPRGDESAQRGGRRPPTLCALSPAPAAQPSPVRPAE FT TMDTEDDPLLQDVWLEEEQEEEEATGETFLGAQKPGPQPGAGGQCCWRHWPLASRPPAS FT GFWSTLGWAFTNPCCAGLVLFLGCSIPMALSAFMFLYYPPLDIDISYNAFEIRNHEASQ FT RFDALTLALKSQFGSWGRNRRDLADFTSETLQRLISEQLQQLHLGNRSRQASRAPRVIP FT AASLGGPGPYRDTSAAQKPTANRSGRLRRETPPLEDLAANQSEDPRNQRLSKNGRYQPS FT IPPHAAVAANQSRARRGASRWDYSRAYVSANTQTHAHWRIELIFLARGDAERNIFTSER FT LVTIHEIERKIMDHPGFREFCWKPHEVLKDLPLGSYSYCSPPSSLMTYFFPTERGGKIY FT YDGMGQDLADIRGSLELAMTHPEFYWYVDEGLSADNLKSSLLRSEILFGAPLPNYYSVD FT DRWEEQRAKFQSFVVTYVAMLAKQSTSKVQVLYGGTDLFDYEVRRTFNNDMLLAFISSS FT CIAALVYILTSCSVFLSFFGIASIGLSCLVALFLYHVVFGIQYLGILNGVAAFVIVGIG FT VDDVFVFINTYRQATHLEDPQLRMIHTVQTAGKATFFTSLTTAAAYAANVFSQIPAVHD FT FGLFMSLIVSCCWLAVLVTMPAALGLWSLYLAPLESSCQTSCHQNCSRKTSLHFPGDVF FT AAPEQVGGSPAQGPIPYLDDDIPLLEVEEEPVSLELGDVSLVSVSPEGLQPASNTGSRG FT HLIVQLQELLHHWVLWSAVKSRWVIVGLFVSILILSLVFASRLRPASRAPLLFRPDTNI FT QVLLDLKYNLSAEGISCITCSGLFQEKPHSLQNNIRTSLEKKRRGSGVPWASRPEATLQ FT DFPGTVYISKVKSQGHPAVYRLSLNASLPAPWQAVSPGDGEVPSFQVYRAPFGNFTKKL FT TACMSTVGLLQAASPSRKWMLTTLACDAKRGWKFDFSFYVATKEQQHTRKLYFAQSHKP FT PFHGRVCMAPPGCLLSSSPDGPTKGFFFVPSEKVPKARLSATFGFNPCVNTGCGKPAVR FT PLVDTGAMVFVVFGIIGVNRTRQVDNHVIGDPGSVVYDSSFDLFKEIGHLCHLCKAIAA FT NSELVKPGGAQCLPSGYSISSFLQMLHPECKELPEPNLLPGQLSHGAVGVREGRVQWIS FT MAFESTTYKGKSSFQTYSDYLRWESFLQQQLQALPEGSVLRRGFQTCEHWKQIFMEIVG FT VQSALCGLVLSLLICVAAVAVFTTHILLLLPVLLSILGIVCLVVTIMYWSGWEMGAVEA FT ISLSILVGSSVDYCVHLVEGYLLAGENLPPHQAEDARTQRQWRTLEAVRHVGVAIVSSA FT LTTVIATVPLFFCIIAPFAKFGKIVALNTGVSILYTLTVSTALLGIMAPSSFTRTRTSF FT LKALGAVLLAGALGLGACLVLLQSGYKIPLPAGASL" FT misc_feature 11558578 FT /note="Clone_left_end: RP4-539L13" FT misc_feature complement(11562578..11687897) FT /note="annotated region of clone" FT polyA_site 11673412 FT polyA_signal 11673389..11673394 FT mRNA join(11669588..11670170,11671900..11672035, FT 11672847..11673412) FT /locus_tag="RP1-69M21.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM564768.1" FT /note="match: cDNAs: Em:BC039491.1" FT mRNA join(AL590989.15:<86839..86973,AL590989.15:108591..109689, FT 11562735..11562954,11574447..11574583,11575426..11575560, FT 11576058..11576218,11577520..11577659,11579412..11579560, FT 11579776..11579937,11580744..11580905,11583999..11584112, FT 11585233..11585369,11586708..11586892,11589613..11589743, FT 11589844..11590016,11590964..11591090,11591622..11591767, FT 11594438..11594597,11595068..11595181,11595535..11595701, FT 11596381..11597641) FT /gene="PTCHD2" FT /locus_tag="RP1-69M21.1-001" FT /product="patched domain containing 2" FT /note="match: cDNAs: Em:AB037758.1 Em:AK090326.1 FT Em:AL117236.1" FT /note="match: ESTs: Em:AA339510.1 Em:AA629570.1 FT Em:AI024155.1 Em:AI140704.1 Em:AW138274.1 Em:AW206105.1 FT Em:BB850104.1 Em:BE465007.1 Em:BE982863.1 Em:BF567742.1 FT Em:BG910338.1 Em:BI196393.1 Em:BM678348.1 Em:BM692049.1 FT Em:BQ339453.1 Em:BU614887.1 Em:BU701426.1 Em:BU728807.1 FT Em:BU733859.1 Em:BX104445.1 Em:BY234277.1 Em:R44615.1" FT CDS join(AL590989.15:<86839..86973,AL590989.15:108591..109689, FT 11562735..11562954,11574447..11574583,11575426..11575560, FT 11576058..11576218,11577520..11577659,11579412..11579560, FT 11579776..11579937,11580744..11580905,11583999..11584112, FT 11585233..11585369,11586708..11586892,11589613..11589743, FT 11589844..11590016,11590964..11591090,11591622..11591767, FT 11594438..11594597,11595068..11595181,11595535..11595701, FT 11596381..11596743) FT /codon_start=1 FT /gene="PTCHD2" FT /locus_tag="RP1-69M21.1-001" FT /standard_name="OTTHUMP00000002067" FT /product="patched domain containing 2" FT /note="match: proteins: Tr:Q9P2K9" FT /protein_id="CAI22474.1" FT /translation="AAPRSFPLRLPRGDESAQRGGRRPPTLCALSPAPAAQPSPVRPAE FT TMDTEDDPLLQDVWLEEEQEEEEATGETFLGAQKPGPQPGAGGQCCWRHWPLASRPPAS FT GFWSTLGWAFTNPCCAGLVLFLGCSIPMALSAFMFLYYPPLDIDISYNAFEIRNHEASQ FT RFDALTLALKSQFGSWGRNRRDLADFTSETLQRLISEQLQQLHLGNRSRQASRAPRVIP FT AASLGGPGPYRDTSAAQKPTANRSGRLRRETPPLEDLAANQSEDPRNQRLSKNGRYQPS FT IPPHAAVAANQSRARRGASRWDYSRAYVSANTQTHAHWRIELIFLARGDAERNIFTSER FT LVTIHEIERKIMDHPGFREFCWKPHEVLKDLPLGSYSYCSPPSSLMTYFFPTERGGKIY FT YDGMGQDLADIRGSLELAMTHPEFYWYVDEGLSADNLKSSLLRSEILFGAPLPNYYSVD FT DRWEEQRAKFQSFVVTYVAMLAKQSTSKVQVLYGGTDLFDYEVRRTFNNDMLLAFISSS FT CIAALVYILTSCSVFLSFFGIASIGLSCLVALFLYHVVFGIQYLGILNGVAAFVIVGIG FT VDDVFVFINTYRQATHLEDPQLRMIHTVQTAGKATFFTSLTTAAAYAANVFSQIPAVHD FT FGLFMSLIVSCCWLAVLVTMPAALGLWSLYLAPLESSCQTSCHQNCSRKTSLHFPGDVF FT AAPEQVGGSPAQGPIPYLDDDIPLLEVEEEPVSLELGDVSLVSVSPEGLQPASNTGSRG FT HLIVQLQELLHHWVLWSAVKSRWVIVGLFVSILILSLVFASRLRPASRAPLLFRPDTNI FT QVLLDLKYNLSAEGISCITCSGLFQEKPHSLQNNIRTSLEKKRRGSGVPWASRPEATLQ FT DFPGTVYISKVKSQGHPAVYRLSLNASLPAPWQAVSPGDGEVPSFQVYRAPFGNFTKKL FT TACMSTVGLLQAASPSRKWMLTTLACDAKRGWKFDFSFYVATKEQQHTRKLYFAQSHKP FT PFHGRVCMAPPGCLLSSSPDGPTKGFFFVPSEKVPKARLSATFGFNPCVNTGCGKPAVR FT PLVDTGAMVFVVFGIIGVNRTRQVDNHVIGDPGSVVYDSSFDLFKEIGHLCHLCKAIAA FT NSELVKPGGAQCLPSGYSISSFLQMLHPECKELPEPNLLPGQLSHGAVGVREGRVQWIS FT MAFESTTYKGKSSFQTYSDYLRWESFLQQQLQALPEGSVLRRGFQTCEHWKQIFMEIVG FT VQSALCGLVLSLLICVAAVAVFTTHILLLLPVLLSILGIVCLVVTIMYWSGWEMGAVEA FT ISLSILVGSSVDYCVHLVEGYLLAGENLPPHQAEDARTQRQWRTLEAVRHVGVAIVSSA FT LTTVIATVPLFFCIIAPFAKFGKIVALNTGVSILYTLTVSTALLGIMAPSSFTRTRTSF FT LKALGAVLLAGALGLGACLVLLQSGYKIPLPAGASL" FT polyA_site 11597641 FT polyA_signal 11597587..11597592 FT misc_feature complement(11594407) FT /note="Clone_right_end: RP3-330O12" FT mRNA join(11593733..11593884,11594438..11594597, FT 11595068..11595181,11595535..11595701,11596381..11597282) FT /gene="PTCHD2" FT /locus_tag="RP1-69M21.1-002" FT /product="patched domain containing 2" FT /note="match: cDNAs: Em:AL117235.1" FT CDS join(11593851..11593884,11594438..11594597, FT 11595068..11595181,11595535..11595701,11596381..11596712) FT /gene="PTCHD2" FT /locus_tag="RP1-69M21.1-002" FT /standard_name="OTTHUMP00000002068" FT /product="patched domain containing 2" FT /note="match: proteins: Tr:Q9UJD7" FT /protein_id="CAI22475.1" FT /translation="MSRYLKNLLEQDHVQGQILLPDLLGLPALGELPPAAAAGLARGLS FT PAPGLPDLRALEADIHGNRRGAERPVRPGAIPAHLRGRGGRVHHPHPAPAARAPQHLGH FT RVPGGDHHVLERLGDGGCGSHLPVHPRWLLRGLLRPPGRGLPAGWREPAPPPGRGRPNA FT APVAYAGGRAARGRGHRLQCPHHGHRHSAPLLLHHRPICQVRQDCGTQHGRVHPLHADR FT QHRPAGHHGAQLFHSDPDFLPQGPGCRAAGRGPGAGCLPRAPAERL" FT misc_feature complement(11562578) FT /note="Clone_left_end: RP1-69M21" FT misc_feature 11687898..11776033 FT /note="annotated region of clone" FT misc_feature 11694421 FT /note="Clone_right_end: RP4-539L13" FT polyA_site complement(11708424) FT polyA_signal complement(11708462..11708467) FT mRNA complement(join(11709585..11709931,11710002..11710131, FT 11710523..11710770)) FT /gene="FBXO2" FT /locus_tag="RP3-330O12.1-004" FT /product="F-box protein 2" FT /note="match: ESTs: Em:BI763235.1" FT misc_feature 11712899..11712902 FT /note="Weak data" FT misc_feature 11712903..11712905 FT /note="Weak data" FT misc_feature 11712907..11712910 FT /note="Weak data" FT misc_feature 11712912..11712915 FT /note="Weak data" FT misc_feature 11712916..11712925 FT /note="Weak data" FT misc_feature 11712926..11712947 FT /note="Weak data" FT misc_feature 11712949..11713002 FT /note="Weak data" FT mRNA complement(join(11710794..11710891,11713448..11713586)) FT /gene="FBXO2" FT /locus_tag="RP3-330O12.1-003" FT /product="F-box protein 2" FT /note="match: ESTs: Em:BM723727.1" FT mRNA complement(join(11709931..11710131,11710523..11710891, FT 11713448..11713484,11714088..11714254)) FT /gene="FBXO2" FT /locus_tag="RP3-330O12.1-002" FT /product="F-box protein 2" FT /note="match: ESTs: Em:BI545439.1" FT mRNA complement(join(11708424..11708885,11709144..11709282, FT 11709836..11709931,11710002..11710131,11710523..11710891, FT 11714376..11714739)) FT /gene="FBXO2" FT /locus_tag="RP3-330O12.1-001" FT /product="F-box protein 2" FT /note="match: cDNAs: Em:AF174594.1 Em:AF187318.1 FT Em:BC014957.1 Em:BC025233.1" FT /note="match: ESTs: Em:AA063432.1 Em:AA441848.1 FT Em:AA845468.1 Em:AI928563.1 Em:AI952839.1 Em:AW162121.1 FT Em:AW341116.1 Em:AW341533.1 Em:AW341600.1 Em:AW772633.1 FT Em:AW779941.1 Em:AW799873.1 Em:AW956086.1 Em:BE220320.1 FT Em:BF431788.1 Em:BF437653.1 Em:BF446495.1 Em:BF475631.1 FT Em:BF967195.1 Em:BG701090.1 Em:BG716043.1 Em:BG771451.1 FT Em:BG772775.1 Em:BG829900.1 Em:BG829997.1 Em:BG900236.1 FT Em:BI193519.1 Em:BI545561.1 Em:BI546638.1 Em:BI598223.1 FT Em:BI598543.1 Em:BI602337.1 Em:BI667280.1 Em:BI670122.1 FT Em:BM128229.1 Em:BM128645.1 Em:BM666617.1 Em:BM669427.1 FT Em:BM699604.1 Em:BM699742.1 Em:BM701770.1 Em:BM969984.1 FT Em:BM975678.1 Em:BU527402.1 Em:BU731065.1 Em:BU737563.1 FT Em:CA424922.1" FT CDS complement(join(11708751..11708885,11709144..11709282, FT 11709836..11709931,11710002..11710131,11710523..11710891, FT 11714376..11714397)) FT /gene="FBXO2" FT /locus_tag="RP3-330O12.1-001" FT /standard_name="OTTHUMP00000002066" FT /product="F-box protein 2" FT /note="match: proteins: Sw:Q9UK22" FT /protein_id="CAI20209.1" FT /translation="MDGDGDPESVGQPEEASPEEQPEEASAEEERPEDQQEEEAAAAAA FT YLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGGVE FT EERDHWQQFYFLSKRRRNLLRNPCGEEDLEGWCDVEHGGDGWRVEELPGDSGVEFTHDE FT SVKKYFASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRSDAGCLYELTVK FT LLSEHENVLAEFSSGQVAVPQDSDGGGWMEISHTFTDYGPGVRFVRFEHGGQDSVYWKG FT WFGARVTNSSVWVEP" FT mRNA join(11714432..11714638,11715863..11716157, FT 11718324..11718421,11718793..11718928,11721187..11722346) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-002" FT /product="F-box protein 44" FT /note="match: cDNAs: Em:AK055344.1" FT mRNA join(11714914..11715009,11715385..11715756, FT 11715863..11716157,11718324..11718421,11718793..>11718925) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-004" FT /product="F-box protein 44" FT /note="match: ESTs: Em:BI821016.1 Em:BI824139.1 FT Em:BI910539.1 Em:BM906115.1 Em:BX361642.1 Em:BX375571.1" FT mRNA join(11714938..11715009,11715863..11716157, FT 11718324..11718421,11718590..11718685,11718793..11718928, FT 11721187..11721448) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-006" FT /product="F-box protein 44" FT /note="match: ESTs: Em:BM921907.1 Em:BM925679.1" FT mRNA join(11714958..11715009,11715863..11716157, FT 11718324..11718450,11718590..11718685,11718793..11718928, FT 11721187..11723383) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-001" FT /product="F-box protein 44" FT /note="match: cDNAs: Em:AK077452.1 Em:AY040878.1" FT /note="match: ESTs: Em:AA236229.1 Em:AI269945.1 FT Em:AI744853.1 Em:AI935776.1 Em:AI952011.1 Em:AL711268.1 FT Em:AV722616.1 Em:AW157034.1 Em:AW817475.1 Em:BG056842.1 FT Em:BI551645.1 Em:BI761677.1 Em:BI763918.1 Em:BI838115.1 FT Em:BM015388.1 Em:BM676609.1 Em:BM683536.1 Em:BM714229.1 FT Em:BM801700.1 Em:BM903606.1 Em:BM922644.1 Em:BQ679041.1 FT Em:BU174132.1 Em:BU684257.1 Em:BU739035.1 Em:BX093428.1 FT Em:CB851742.1" FT mRNA join(11714967..11715009,11715727..11715756, FT 11715863..11716157,11718324..11718421,11718793..11718928, FT 11721187..11721406) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-008" FT /product="F-box protein 44" FT /note="match: ESTs: Em:BI755690.1 Em:BI824372.1" FT mRNA join(11714967..11715009,11715863..11716157, FT 11718324..11718421,11718793..11718928,11721187..11722348) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-003" FT /product="F-box protein 44" FT /note="match: cDNAs: Em:AY007380.1 Em:BC007832.2" FT mRNA complement(join(11710604..11710891,11715697..11715842)) FT /gene="FBXO2" FT /locus_tag="RP3-330O12.1-005" FT /product="F-box protein 2" FT /note="match: ESTs: Em:AW160505.1" FT CDS join(11715893..11716157,11718324..11718421, FT 11718793..>11718925) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-004" FT /standard_name="OTTHUMP00000002242" FT /product="F-box protein 44" FT /protein_id="CAI20210.1" FT /translation="MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVT FT LWKRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEW FT KVEDLSRDQRKEFPNDQVRSQARLRVQVPAVRSAPVVRARASGDLPARPGDHPAEERCQ FT VE" FT CDS join(11715893..11716157,11718324..11718450, FT 11718590..11718685,11718793..11718928,11721187..11721330) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-001" FT /standard_name="OTTHUMP00000002063" FT /product="F-box protein 44" FT /note="match: proteins: Sw:Q9H4M3" FT /protein_id="CAI20211.1" FT /translation="MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVT FT LWKRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEW FT KVEDLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDW FT FAARPDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRY FT IWFQHGGVDTHYWAGWYGPRVTNSSITIGPPLP" FT CDS join(11715893..11716157,11718324..11718421, FT 11718793..11718928,11721187..11721362) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-002" FT /standard_name="OTTHUMP00000002064" FT /product="F-box protein 44" FT /protein_id="CAI20212.1" FT /translation="MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVT FT LWKRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEW FT KVEDLSRDQRKEFPNDQVRSQARLRVQVPAVRSAPVVRARASGDLPARPGDHPAEERCQ FT VEGGLPHILQLPARRPLHLVSARRRGHSLLGRLVRPEGHQQQHHHRAPAALTPPEPPSA FT EP" FT CDS join(11715893..11716157,11718324..11718421, FT 11718590..11718685,11718793..11718928,11721187..11721362) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-006" FT /standard_name="OTTHUMP00000035894" FT /product="F-box protein 44" FT /protein_id="CAI20213.1" FT /translation="MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVT FT LWKRKCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEW FT KVEDLSRDQRKEFPNDQHLPQVPGGGPQGRRVLGGADGYHTAGHRGQGLVRSQARLRVQ FT VPAVRSAPVVRARASGDLPARPGDHPAEERCQVEGGLPHILQLPARRPLHLVSARRRGH FT SLLGRLVRPEGHQQQHHHRAPAALTPPEPPSAEP" FT mRNA join(11716122..11716157,11718324..11718421, FT 11718793..11718928,11721187..11721365,11722682..11723174) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-007" FT /product="F-box protein 44" FT /note="match: ESTs: Em:BM921893.1" FT mRNA join(11718599..11718685,11718793..11718928, FT 11721187..11721365,11722682..11722788,11722909..11722985, FT 11723199..11723381) FT /gene="FBXO44" FT /locus_tag="RP3-330O12.2-005" FT /product="F-box protein 44" FT /note="match: cDNAs: Em:AA236298.1 Em:AI300467.1 FT Em:BI912887.1" FT polyA_signal 11722326..11722331 FT polyA_site 11722348 FT polyA_signal 11723358..11723363 FT polyA_site 11723381 FT mRNA join(11724181..11724312,11728713..11729001, FT 11731323..11731449,11731985..11732080,11733334..11733469, FT 11733672..11734411) FT /gene="FBXO6" FT /locus_tag="RP3-330O12.3-001" FT /product="F-box protein 6" FT /note="match: cDNAs: Em:AF129536.1 Em:BC020880.1" FT /note="match: ESTs: Em:AA167659.1 Em:AI188162.1 FT Em:AI341548.1 Em:AW070815.1 Em:BE728770.1 Em:BE728810.1 FT Em:BG429686.1 Em:BI160729.1 Em:BQ019301.1 Em:BQ184245.1 FT Em:BQ185942.1 Em:BQ679204.1 Em:BU149504.1 Em:BU185709.1 FT Em:BU521777.1 Em:BU616015.1 Em:BU631452.1 Em:BX119896.1 FT Em:BX400452.1 Em:CA423504.1 Em:CA423571.1 Em:CB529125.1 FT Em:CD364787.1 Em:CD369838.1 Em:R53494.1" FT mRNA join(11724543..11724792,11728713..11729001, FT 11731323..11731449,11731985..11732121) FT /gene="FBXO6" FT /locus_tag="RP3-330O12.3-002" FT /product="F-box protein 6" FT /note="match: ESTs: Em:BG339115.1" FT CDS join(11728716..11729001,11731323..11731449, FT 11731985..11732080,11733334..11733469,11733672..11733908) FT /gene="FBXO6" FT /locus_tag="RP3-330O12.3-001" FT /standard_name="OTTHUMP00000002267" FT /product="F-box protein 6" FT /note="match: proteins: Sw:Q9NRD1" FT /protein_id="CAI20214.1" FT /translation="MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWR FT DLIDLMTLWKRKCLREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQID FT FNGGDRWKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRP FT DIVVKDWFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSD FT YPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEA FT AQSPYRAVVQIF" FT CDS join(<11728753..11729001,11731323..11731449, FT 11733334..11733469,11733672..11733908) FT /codon_start=3 FT /gene="FBXO6" FT /locus_tag="RP3-330O12.3-003" FT /standard_name="OTTHUMP00000002268" FT /product="F-box protein 6" FT /protein_id="CAI20215.1" FT /translation="NELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKC FT LREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLP FT GAHGTDFPDPKVKKYFVTSYEFAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQW FT NNATWTEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQAS FT SEAQPGQKHGQEEAAQSPYRAVVQIF" FT mRNA join(<11728753..11729001,11731323..11731449, FT 11733334..11733469,11733672..11734087) FT /gene="FBXO6" FT /locus_tag="RP3-330O12.3-003" FT /product="F-box protein 6" FT /note="match: ESTs: Em:BM564022.1" FT polyA_signal 11734066..11734071 FT polyA_site 11734088 FT polyA_signal 11734392..11734397 FT polyA_site 11734411 FT polyA_site complement(11734537) FT polyA_signal complement(11734559..11734564) FT CDS complement(join(<11735713..11735788,11736103..11736197, FT 11736905..11737005,11737600..11737671,11740410..11740658)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-007" FT /standard_name="OTTHUMP00000002279" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /protein_id="CAI20216.1" FT /translation="MTTLTRQDLNFGQGREAGPAGPGAGASGPAGFLERATGLCPPAVV FT ADVLCEFLEVAVHLILYVREVYPVGIFQKRKKYNVPVQMSCHPELNQYIQDTLHCVKPL FT LEKNDVEKVVVVILDKEHRPVEKFVFEITQPPLLSISSDSLLSHVEQLLRAFILKISVC FT DAVLDHNPPGCTFTVLVHTREAATRNMEKIQVIKV" FT CDS complement(join(11734832..11734873,11735139..11735231, FT 11735715..11735788,11736103..11736197,11736905..11737005, FT 11737600..11737671,11740410..11740528,11740619..11740658)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-001" FT /standard_name="OTTHUMP00000002273" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: proteins: Sw:Q9D752 Sw:Q9UI95 Tr:Q8QFR4" FT /protein_id="CAI20218.1" FT /translation="MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKR FT KKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQ FT PPLLSISSDSLLSHVEQLLRAFILKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKI FT QVIKDFPWILADEQDVHMHDPRLIPLKTMTSDILKMQLYVEERAHKGS" FT CDS complement(join(11734832..11734873,11735139..11735231, FT 11735715..11735788,11736103..11736197,11736866..11737005, FT 11737600..11737671,11740410..11740528,11740619..11740658)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-002" FT /standard_name="OTTHUMP00000002274" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /protein_id="CAI20217.1" FT /translation="MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKR FT KKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQ FT PPLLSIRWAAPAPRPLAGISSDSLLSHVEQLLRAFILKISVCDAVLDHNPPGCTFTVLV FT HTREAATRNMEKIQVIKDFPWILADEQDVHMHDPRLIPLKTMTSDILKMQLYVEERAHK FT GS" FT mRNA complement(join(<11735714..11735788,11736103..11736197, FT 11736905..11737005,11737600..11737671,11740410..11740528, FT 11740619..11741188)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-006" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: ESTs: Em:BF215024.1 Em:BG825021.1 FT Em:BG832341.1 Em:BI193559.1 Em:BM747757.1 Em:BM749990.1 FT Em:BM758110.1 Em:BM759925.1 Em:BM783772.1 Em:BM838953.1 FT Em:BM847429.1 Em:BQ219144.1 Em:BQ440792.1 Em:CB117704.1" FT CDS complement(join(<11735714..11735788,11736103..11736197, FT 11736905..11737005,11737600..11737671,11740410..11740528, FT 11740619..11740658)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-006" FT /standard_name="OTTHUMP00000002278" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /protein_id="CAI20219.1" FT /translation="MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKR FT KKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKNDVEKVVVVILDKEHRPVEKFVFEITQ FT PPLLSISSDSLLSHVEQLLRAFILKISVCDAVLDHNPPGCTFTVLVHTREAATRNMEKI FT QVIK" FT CDS complement(join(11735927..11736197,11736905..11737005, FT 11740410..11740528,11740619..11740658)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-008" FT /standard_name="OTTHUMP00000002280" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /protein_id="CAI20220.1" FT /translation="MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKR FT KKYNVPVQNDVEKVVVVILDKEHRPVEKFVFEITQPPLLSISSDSLLSHVEQLLRAFIL FT KISVCDAVLDHNPPGVSTPHPLFPWHFHGYLGLVCVPRSMFGCSETHLFLTLRVHLLWE FT ASLIDSTWLPSPY" FT CDS complement(join(11737513..11737671,11740410..11740528, FT 11740619..11740658)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-005" FT /standard_name="OTTHUMP00000002277" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /protein_id="CAI20221.1" FT /translation="MTTLTRQDLNFGQVVADVLCEFLEVAVHLILYVREVYPVGIFQKR FT KKYNVPVQMSCHPELNQYIQDTLHCVKPLLEKVRVHWAPQPSHPMLTPVPVCSQSNSGM FT G" FT mRNA complement(join(11734735..11734873,11735139..11735231, FT 11735715..11735788,11736103..11736197,11736866..11737005, FT 11737600..11737671,11740410..11740528,11740619..11740670, FT 11741096..11741175)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-002" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: ESTs: Em:BI198627.1 Em:BQ670654.1 FT Em:BQ959482.1" FT mRNA complement(join(<11735713..11735788,11736103..11736197, FT 11736905..11737005,11737600..11737671,11740410..11740670, FT 11741096..11741168)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-007" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: ESTs: Em:BE270102.1" FT mRNA complement(join(11735633..11736197,11736905..11737005, FT 11740410..11740528,11740619..11740670,11741096..11741168)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-008" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: ESTs: Em:BM920608.1" FT mRNA complement(join(11734545..11734873,11735139..11735231, FT 11735715..11735788,11736103..11736197,11736905..11737005, FT 11737600..11737671,11740410..11740528,11740619..11740670, FT 11741096..11741495,11741795..11742073,11751470..11751707)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-001" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: cDNAs: Em:AF072933.1 Em:AF080398.1 FT Em:AF139365.1 Em:AF157482.1 Em:AK027327.1 Em:AK094316.1 FT Em:BC015244.1" FT /note="match: ESTs: Em:AA076651.1 Em:AA293812.1 FT Em:AI085220.1 Em:AI318369.1 Em:AI346937.1 Em:AI499014.1 FT Em:AI678045.1 Em:AI817075.1 Em:AI934623.1 Em:AI934641.1 FT Em:AL558372.2 Em:AL580212.2 Em:AU100375.1 Em:AW069723.1 FT Em:AW204511.1 Em:AW207802.1 Em:BE396490.1 Em:BE561003.1 FT Em:BE903557.1 Em:BF673575.1 Em:BF887485.1 Em:BF982018.1 FT Em:BG026497.1 Em:BG060101.1 Em:BG421775.1 Em:BG498977.1 FT Em:BG575420.1 Em:BG681697.1 Em:BG767105.1 Em:BI226290.1 FT Em:BI226490.1 Em:BI861837.1 Em:BM041411.1 Em:BM045261.1 FT Em:BM474301.1 Em:BM559475.1 Em:BM739532.1 Em:BM796856.1 FT Em:BM907198.1 Em:BM917205.1 Em:BM968435.1 Em:BQ100843.1 FT Em:BQ218045.1 Em:BQ430507.1 Em:BQ649779.1 Em:BQ670814.1 FT Em:BQ673165.1 Em:BQ720995.1 Em:BQ943074.1 Em:BU145299.1 FT Em:BU148851.1 Em:BU599363.1 Em:BU686966.1 Em:BU849544.1 FT Em:BX283956.1 Em:BX337143.1 Em:BX392699.1 Em:CB106803.1 FT Em:W47056.1" FT mRNA complement(join(11734805..11734873,11735139..11735231, FT 11735715..11735788,11736103..11736197,11736905..11737005, FT 11737600..11737671,11740410..11740528,11740619..11740670, FT 11751470..11751666)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-003" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: ESTs: Em:AA172327.1 Em:BF034175.1 FT Em:BG389113.1 Em:BI517654.1 Em:BM041282.1 Em:BU175468.1 FT Em:BU507092.1" FT mRNA complement(join(11734582..11734873,11735139..11735231, FT 11735715..11735788,11736103..11736197,11736866..11737005, FT 11737600..11737671,11740410..11740528,11740619..11740670, FT 11751470..11751534)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-004" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: ESTs: Em:BM465188.1 Em:BM760440.1 FT Em:BM838326.1 Em:BM841256.1 Em:BM841551.1 Em:BM841575.1 FT Em:BM841685.1 Em:BM842010.1" FT mRNA complement(join(11736929..11737671,11740410..11740528, FT 11740619..11740670,11751470..11751650)) FT /gene="MAD2L2" FT /locus_tag="RP3-330O12.4-005" FT /product="MAD2 mitotic arrest deficient-like 2 (yeast)" FT /note="match: ESTs: Em:BX440584.1" FT mRNA join(11751786..11751910,11766306..11766766, FT 11769332..11769522,11771908..11772022,11772397..11772486, FT 11775176..11775265,AL953897.6:5608..11881) FT /gene="C1orf187" FT /locus_tag="RP11-56N19.1-001" FT /product="chromosome 1 open reading frame 187" FT /note="match: cDNAs: Em:AK075558.1 Em:AK092318.1 FT Em:AX747479.1 Em:BC021286.1 Em:BC021286.2" FT /note="match: ESTs: Em:AA171403.1 Em:AA974305.1 FT Em:AI653164.1 Em:AL536786.2 Em:AL537197.2 Em:AL538969.2 FT Em:AL566492.2 Em:AL566704.2 Em:AL567594.2 Em:AW160951.1 FT Em:BI160755.1 Em:BM713527.1 Em:BM928129.1 Em:BU739555.1 FT Em:BU855375.1 Em:BU856501.1 Em:BX102570.1 Em:BX410044.1 FT Em:BX452073.1 Em:BX453564.1 Em:BX455428.1 Em:BX461156.1" FT CDS join(11766316..11766766,11769332..11769522, FT 11771908..11772022,11772397..11772486,11775176..11775265, FT AL953897.6:5608..5720) FT /gene="C1orf187" FT /locus_tag="RP11-56N19.1-001" FT /standard_name="OTTHUMP00000002262" FT /product="chromosome 1 open reading frame 187" FT /note="match: proteins: Tr:Q8NBI3" FT /protein_id="CAI20222.1" FT /translation="MAGPAIHTAPMLFLVLLLPLELSLAGALAPGTPARNLPENHIDLP FT GPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAG FT LLQDKDLLLGLALPYPEKENRPPGWERTRKRSREHKRRRDRLRLHQGRALVRGPSSLMK FT KAELSEAQVLDAAMEESSTSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQPRSDG FT EVMPTLDMALFDWTDYEDLKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCL FT PGTCCDLREHLCTPHNRGLNNKCFDDCMCVEGLRCYAKFHRNRRVTRRKGRCVEPETAN FT GDQGSFINV" FT misc_feature 11774033 FT /note="Clone_right_end: RP3-330O12" FT misc_feature 11776034..11876542 FT /note="annotated region of clone" FT polyA_signal 11785889..11785894 FT polyA_site 11785914 FT mRNA join(11796141..11796292,11807497..11807602, FT 11808472..11808646,11810134..11810767) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-003" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:BI518455.1 Em:CA866314.1" FT mRNA join(11796174..11796292,11805860..11805894, FT 11806045..11806280,11807497..11807602,11808472..11808667, FT 11810134..11810383) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-008" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:BI818923.1 Em:BM793897.1" FT mRNA join(11796187..11796292,11805860..11806729) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-004" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:AW811042.1 Em:AW811130.1 FT Em:AW811168.1 Em:BQ364181.1 Em:CD252425.1" FT mRNA join(11796199..11796292,11805860..11805894, FT 11805987..11806280,11807497..11807602,11808472..11808646, FT 11810134..11810545) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-007" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:BM555907.1 Em:BM743708.1 FT Em:BM752596.1 Em:BM764617.1 Em:BM772591.1 Em:BM772673.1" FT mRNA join(11796204..11796292,11805860..11805894, FT 11807497..11807602,11808472..11808646,11810134..11810826) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-002" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:BF978637.1 Em:BG328057.1 FT Em:BG570145.1 Em:CA489457.1" FT /note="match: cDNAs: Em:BC017328.2" FT mRNA join(11796207..11796292,11804590..11804625, FT 11805860..11805894,11806184..11806280,11807497..11807602, FT 11808472..11808667,11810134..11810635) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-005" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:BM561954.1 Em:CA488206.1" FT mRNA join(11796212..11796292,11805860..11805894, FT 11807497..11807602,11808472..11808667,11810134..11810822) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-001" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:AI858573.1 Em:AL519724.2 FT Em:AL519725.2 Em:AL525290.2 Em:AL525334.2 Em:BE899555.1 FT Em:BF570227.1 Em:BF665062.1 Em:BG221286.1 Em:BG679718.1 FT Em:BG696245.1 Em:BG697826.1 Em:BM014496.1 Em:BM680803.1 FT Em:BM910550.1 Em:BQ009813.1 Em:BQ014100.1 Em:BQ018156.1 FT Em:BQ052619.1 Em:BQ678223.1 Em:BU169177.1 Em:BU171952.1 FT Em:BU179889.1 Em:BU688714.1 Em:BU689036.1 Em:BU734234.1 FT Em:BU844714.1 Em:BX372607.1 Em:BX411622.1 Em:BX425035.1 FT Em:BX487060.1 Em:CA435156.1 Em:CA453933.1 Em:CA453935.1 FT Em:CA453973.1 Em:CA453975.1 Em:CA454244.1 Em:CB529559.1 FT Em:CB851535.1 Em:CD365514.1 Em:CF126481.1 Em:T65625.1" FT /note="match: cDNAs: Em:AF165187.1 Em:AF312374.1" FT CDS join(11796266..11796292,11804590..11804625, FT 11805860..11805894,11806184..11806280,11807497..11807602, FT 11808472..11808650) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-005" FT /standard_name="OTTHUMP00000002272" FT /product="angiotensin II receptor-associated protein" FT /protein_id="CAI15876.1" FT /translation="MELPAVNLKCASSSVPRNHPHVILLGHWLLTTCFWRHFSAKPRLE FT TIELTCALCKLRSAAHRATAGLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHVSGW FT LAGHHLPGHRAHQHLLPAGQPHGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARG" FT CDS join(11796266..11796292,11807497..11807602, FT 11808472..11808646,11810134..11810161) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-003" FT /standard_name="OTTHUMP00000002271" FT /product="angiotensin II receptor-associated protein" FT /protein_id="CAI15877.1" FT /translation="MELPAVNLKGLHCILRLLCLGQLHHPGLGRVGCGSAGLHRRHKHV FT SGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRGHGHPQLAAQAALLLLRLPHVPGARGF FT PWVFSGP" FT CDS join(11796266..11796292,11805860..11805894, FT 11807497..11807602,11808472..11808667,11810134..11810249) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-001" FT /standard_name="OTTHUMP00000002269" FT /product="angiotensin II receptor-associated protein" FT /protein_id="CAI15878.1" FT /translation="MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAV FT AQRDSIDAISMFLGGLLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCC FT FVYHMYRERGGELLVHTGFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY" FT CDS join(11796266..11796292,11805860..11805894, FT 11807497..11807602,11808472..11808646,11810134..11810249) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-002" FT /standard_name="OTTHUMP00000002270" FT /product="angiotensin II receptor-associated protein" FT /protein_id="CAI15879.1" FT /translation="MELPAVNLKVILLGHWLLTTWGCIVFSGSYAWANFTILALGVWAV FT AQRDSIDAISMFLGGLLATIFLDIVHISIFYPRVSLTDTGRFGVGMAILSLLLKPLSCC FT FVYHMYRERGGFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQDARGY" FT mRNA join(11805858..11805894,11806184..11806280, FT 11807497..11807602,11808472..11808646,11810134..11810466) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-006" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:BG569955.1 Em:BM707749.1" FT mRNA join(11807569..11807602,11808472..11808667, FT 11810134..11810242,11814482..11814859) FT /gene="AGTRAP" FT /locus_tag="RP11-56N19.3-009" FT /product="angiotensin II receptor-associated protein" FT /note="match: ESTs: Em:BU625585.1" FT polyA_signal 11810804..11810809 FT polyA_site 11810828 FT polyA_signal 11814833..11814838 FT polyA_site 11814859 FT misc_feature 11820486..11820573 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(11826799..11827142,11827278..11827321, FT 11828134..11828332,11829030..11829184,11831581..11831693, FT 11832139..11832316,11835492..11835667,11836521..11836695, FT 11837186..11838367) FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-001" FT /product="chromosome 1 open reading frame 167" FT /note="match: cDNAs: Em:AL833920.1" FT misc_feature 11827405..11827429 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT CDS join(<11832179..11832316,11835492..11835667, FT 11836521..11836695,11838717..11838873,11838983..11839137, FT 11839859..11840067,11842246..11842390,11844231..11844650, FT 11845205..11845346,11847445..11847550,11847930..11848104, FT 11848221..11848435,11848709..11848803,11849327..11849503) FT /codon_start=2 FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-002" FT /standard_name="OTTHUMP00000002264" FT /product="chromosome 1 open reading frame 167" FT /note="match: proteins: Tr:Q8NDA9" FT /protein_id="CAI15881.1" FT /translation="ERETLRKATRATQRTGSFPQAWHSTAAGVAWVAPLSPQHQRAWLC FT RCFGAWQQFVQRGSRYRDHLADRRTGTLRKCLEQWVRMKQLRESDGAKVTQLSLCRQKA FT GREAVYTAGPGACGLGAVGQAQGQQEQGRGSLQDACWTLALCWALLLWKMRLFQRQWAN FT SFFQGLQQRMLQRSLRWWHLRALGPDATSSCTKTPSALEPLSSSTLQDSLEKVPRAPTL FT PDTLQGSLLWAAGQRQQGQCLLLWQARAQQFQGTARWYQHTRQRRIFLSWSRWATAQWA FT WRELASHRAWDRTCRAVLGLWRQRLLQSRLVEWWAQERGWRLARDALCHWHSCWQGQQF FT LHEKCQTWVQVHLQGLQKVVFRSWQQAAAHQRCTVTRPEQLLLQSYFQAWCEVVRDTGV FT LRAQHQAFQDGLRRRALGAVFATWREAQEVAAGAQEQRVAQASLARWRSCGQQGQEDGQ FT QKKARAPQAFPAWPVAPGMHHEAQQQAGESAGAQAAQCWTWCWALWVHESCRGQVSRAH FT ASWKPRAWVLEASVQSAVRGGVQRAILTQLRPAELRRFLRTVQLRVRLGLPGAGKTRSC FT WTQATELVPPAPSLQCSLGGRRKPRGTAWAQRCREHSLCPAFQLWPQWPGQSSWVPGLP FT LWTRDQGPRAHSSPEPRACKAQSKAHKRRLRILEKQAQAHGSALLLALKGHDALGHQEE FT VPAAPVPRGTASRAAGFPAGQVPGSGMAALGGCPRGRAAGADPAQGVAPEMGLADVVAA FT DPATASGSAVTAAGRWAFKKWHQRLAARSPRRGAASSPRPWSKPGPKGPESGQEAARAP FT RGWGLGAEHGAQLQL" FT mRNA join(<11832179..11832316,11835492..11835667, FT 11836521..11836695,11838717..11838873,11838983..11839137, FT 11839859..11840067,11842246..11842390,11844231..11844650, FT 11845205..11845346,11847445..11847550,11847930..11848104, FT 11848221..11848435,11848709..11848803,11849327..11849642) FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-002" FT /product="chromosome 1 open reading frame 167" FT /note="match: ESTs: Em:BI827615.1" FT /note="match: cDNAs: Em:AL834308.1" FT CDS join(<11838988..11839137,11839859..11840067, FT 11842246..11842390,11844231..11844650,11845205..11845346, FT 11847445..11847550,11847930..11848104,11848206..11848435, FT 11848709..11848803,11849327..11849503) FT /codon_start=2 FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-004" FT /standard_name="OTTHUMP00000002265" FT /product="chromosome 1 open reading frame 167" FT /note="match: proteins: Tr:Q8NDF3" FT /protein_id="CAI15882.1" FT /translation="RAPTLPDTLQGSLLWAAGQRQQGQCLLLWQARAQQFQGTARWYQH FT TRQRRIFLSWSRWATAQWAWRELASHRAWDRTCRAVLGLWRQRLLQSRLVEWWAQERGW FT RLARDALCHWHSCWQGQQFLHEKCQTWVQVHLQGLQKVVFRSWQQAAAHQRCTVTRPEQ FT LLLQSYFQAWCEVVRDTGVLRAQHQAFQDGLRRRALGAVFATWREAQEVAAGAQEQRVA FT QASLARWRSCGQQGQEDGQQKKARAPQAFPAWPVAPGMHHEAQQQAGESAGAQAAQCWT FT WCWALWVHESCRGQVSRAHASWKPRAWVLEASVQSAVRGGVQRAILTQLRPAELRRFLR FT TVQLRVRLGLPGAGKTRSCWTQATELVPPAPSLQCSLGGRRKPRGTAWAQRCREHSLCP FT AFQLWPQWPGQSSWVPGLPLWTRDQGPRAHSSPEPRACKAQSKAHKRRLRARSCRILEK FT QAQAHGSALLLALKGHDALGHQEEVPAAPVPRGTASRAAGFPAGQVPGSGMAALGGCPR FT GRAAGADPAQGVAPEMGLADVVAADPATASGSAVTAAGRWAFKKWHQRLAARSPRRGAA FT SSPRPWSKPGPKGPESGQEAARAPRGWGLGAEHGAQLQL" FT mRNA join(<11838988..11839137,11839859..11840067, FT 11842246..11842390,11844231..11844650,11845205..11845346, FT 11847445..11847550,11847930..11848104,11848206..11848435, FT 11848709..11848803,11849327..11849535) FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-004" FT /product="chromosome 1 open reading frame 167" FT /note="match: cDNAs: Em:AL833926.1" FT mRNA complement(join(11837134..11838341,11838702..11838864, FT 11839180..11839676)) FT /locus_tag="RP11-56N19.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI826945.1" FT /note="match: cDNAs: Em:BC034298.1" FT CDS join(<11839874..11840067,11842251..11842390, FT 11844231..11844650,11845205..11845346,11847445..11847550, FT 11847930..11848104,11848300..11848435,11848709..11848803, FT 11849327..11849516) FT /codon_start=3 FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-005" FT /standard_name="OTTHUMP00000002266" FT /product="chromosome 1 open reading frame 167" FT /protein_id="CAI15883.1" FT /translation="AAGQQPNGPGESWLPTGPGIGPAGLCWACGVSGCCSHGWWSGGPR FT SGAGGWHEMPYATGTPVGRQFLHEKCQTWVQVHLQGLQKVVFRSWQQAAAHQRCTVTRP FT EQLLLQSYFQAWCEVVRDTGVLRAQHQAFQDGLRRRALGAVFATWREAQEVAAGAQEQR FT VAQASLARWRSCGQQGQEDGQQKKARAPQAFPAWPVAPGMHHEAQQQAGESAGAQAAQC FT WTWCWALWVHESCRGQVSRAHASWKPRAWVLEASVQSAVRGGVQRAILTQLRPAELRRF FT LRTVQLRVRLGLPGAGKTRSCWTQATELVPPAPSLQCSLGGRRKPRGTAWAQRCREHSL FT CPAFQLWPQWPGQSSWVPGLPLWTRDQGPRAHSSPEPRACKAQSKAHKRRLRRKYLQRR FT CLEALLHGLRGSQQARCLAVAWQHWVDAQGAEQLVRTLLREWHLRWAWQTWWQRILRLR FT VAQQLQQQEDGPLRSGTNAWQPGAQGEELPVAQDPGASQAPRAPRVDRKPPEHRGVGGL FT GQSMGPSCSCDLFS" FT mRNA join(<11839874..11840067,11842251..11842390, FT 11844231..11844650,11845205..11845346,11847445..11847550, FT 11847930..11848104,11848300..11848435,11848709..11848803, FT 11849327..11849535) FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-005" FT /product="chromosome 1 open reading frame 167" FT /note="match: ESTs: Em:BM920101.1" FT /note="match: cDNAs: Em:BC031692.1" FT mRNA join(AL031731.44:65889..66013,AL031731.44:80409..80869, FT AL031731.44:83435..83625,AL031731.44:86011..86125, FT AL031731.44:86500..86589,AL031731.44:89279..89368, FT 11779641..11785914) FT /gene="C1orf187" FT /locus_tag="RP11-56N19.1-001" FT /product="chromosome 1 open reading frame 187" FT /note="match: ESTs: Em:AA171403.1 Em:AA974305.1 FT Em:AI653164.1 Em:AL536786.2 Em:AL537197.2 Em:AL538969.2 FT Em:AL566492.2 Em:AL566704.2 Em:AL567594.2 Em:AW160951.1 FT Em:BI160755.1 Em:BM713527.1 Em:BM928129.1 Em:BU739555.1 FT Em:BU855375.1 Em:BU856501.1 Em:BX102570.1 Em:BX410044.1 FT Em:BX452073.1 Em:BX453564.1 Em:BX455428.1 Em:BX461156.1" FT /note="match: cDNAs: Em:AK075558.1 Em:AK092318.1 FT Em:AX747479.1 Em:BC021286.1 Em:BC021286.2" FT mRNA join(11845228..11845346,11847445..11848012) FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-006" FT /product="chromosome 1 open reading frame 167" FT /note="match: ESTs: Em:BI837287.1" FT polyA_site complement(11845780) FT polyA_signal complement(11845801..11845806) FT mRNA join(11847869..11848104,11848300..11848435, FT 11848709..11848803,11849327..11849642) FT /gene="C1orf167" FT /locus_tag="RP11-56N19.2-003" FT /product="chromosome 1 open reading frame 167" FT /note="match: ESTs: Em:BX118390.1" FT /note="match: cDNAs: Em:AF398935.1" FT polyA_signal 11849619..11849624 FT polyA_site 11849642 FT CDS join(AL031731.44:80419..80869,AL031731.44:83435..83625, FT AL031731.44:86011..86125,AL031731.44:86500..86589, FT AL031731.44:89279..89368,11779641..11779753) FT /gene="C1orf187" FT /locus_tag="RP11-56N19.1-001" FT /standard_name="OTTHUMP00000002262" FT /product="chromosome 1 open reading frame 187" FT /note="match: proteins: Tr:Q8NBI3" FT /protein_id="CAI15884.1" FT /translation="MAGPAIHTAPMLFLVLLLPLELSLAGALAPGTPARNLPENHIDLP FT GPALWTPQASHHRRRGPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAG FT LLQDKDLLLGLALPYPEKENRPPGWERTRKRSREHKRRRDRLRLHQGRALVRGPSSLMK FT KAELSEAQVLDAAMEESSTSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQPRSDG FT EVMPTLDMALFDWTDYEDLKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCL FT PGTCCDLREHLCTPHNRGLNNKCFDDCMCVEGLRCYAKFHRNRRVTRRKGRCVEPETAN FT GDQGSFINV" FT mRNA complement(join(11845780..11850955,11851264..11851383, FT 11852335..11852436,11853964..11854146,11854415..11854595, FT 11854786..11854920,11855155..11855405,11856263..11856456, FT 11860269..11860379,11861218..11861456,11862938..11863302)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-001" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /note="match: ESTs: Em:AA340811.1 Em:AA747599.1 FT Em:AI032831.1 Em:AI288736.1 Em:AI305263.1 Em:AI333711.1 FT Em:AI435368.1 Em:AL048482.2 Em:AL138431.1 Em:AW971044.1 FT Em:AW975991.1 Em:BE244583.1 Em:BE513500.1 Em:BE740198.1 FT Em:BF212925.1 Em:BF688664.1 Em:BF688893.1 Em:BF930775.1 FT Em:BF934146.1 Em:BG675748.1 Em:BG683043.1 Em:BM310814.1 FT Em:BM662260.1 Em:BM673336.1 Em:BQ060043.1 Em:BQ707098.1 FT Em:BQ881921.1 Em:BQ890185.1 Em:BQ940401.1 Em:BU173172.1 FT Em:BU429511.1 Em:BU501685.1 Em:BU526862.1 Em:BU554105.1 FT Em:BU589291.1 Em:BU599661.1 Em:BX097082.1 Em:BX284012.1 FT Em:BX339166.1 Em:BX369322.1 Em:BX369323.1 Em:BX411608.1 FT Em:CA314946.1 Em:CA428434.1 Em:CA773958.1 Em:CF121684.1 FT Em:H29733.1" FT /note="match: cDNAs: Em:AJ237672.1" FT CDS complement(join(11850737..11850955,11851264..11851383, FT 11852335..11852436,11853964..11854146,11854415..11854595, FT 11854786..11854920,11855155..11855405,11856263..11856456, FT 11860269..11860379,11861218..11861456,11862938..11863173)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-001" FT /standard_name="OTTHUMP00000002367" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /protein_id="CAI15885.1" FT /translation="MVNEARGNSSLNPCLEGSASSGSESSKDSSRCSTPGLDPERHERL FT REKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSD FT KETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIGD FT QWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEAGSFEADLKHLKEKVSAGA FT DFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLEVPQEIK FT DVIEPIKDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWT FT EDPRRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGE FT LKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDE FT PLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFT FT SRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVD FT PVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQV FT VEDTLELLNRPTQNARETEAP" FT CDS complement(join(<11861262..11861456,11862938..11863173)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-004" FT /standard_name="OTTHUMP00000002370" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /protein_id="CAI15886.1" FT /translation="MVNEARGNSSLNPCLEGSASSGSESSKDSSRCSTPGLDPERHERL FT REKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSD FT KETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLH" FT CDS complement(<11863085..11863173) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-003" FT /standard_name="OTTHUMP00000002369" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /protein_id="CAI15887.1" FT /translation="MVNEARGNSSLNPCLEGSASSGSESSKDSS" FT CDS complement(<11863085..11863242) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-005" FT /standard_name="OTTHUMP00000002371" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /protein_id="CAI15888.1" FT /translation="MCRGCGCLPPDAPCPTLCSRNPAMVNEARGNSSLNPCLEGSASSG FT SESSKDSS" FT CDS complement(join(11850737..11850955,11851264..11851383, FT 11852335..11852436,11853964..11854146,11854415..11854595, FT 11854786..11854920,11855155..11855405,11856263..11856456, FT 11860269..11860379,11861218..11861456,11862938..11863186, FT 11863462..11863571)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-007" FT /standard_name="OTTHUMP00000002373" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /protein_id="CAI15889.1" FT /translation="MDHRKARVLPAGHYCPSLGIWASQVGSVRSSVPPSISRNPAMVNE FT ARGNSSLNPCLEGSASSGSESSKDSSRCSTPGLDPERHERLREKMRRRLESGDKWFSLE FT FFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGL FT ETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIGDQWEEEEGGFNYAVDLVKH FT IRSEFGDYFDICVAGYPKGHPEAGSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFV FT KACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLEVPQEIKDVIEPIKDNDAAIRNYGI FT ELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDPRRPLPWALSAHPKRR FT EEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEEL FT LKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNR FT QGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELR FT VNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIER FT WGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLELLNRPTQNARET FT EAP" FT mRNA complement(join(<11863085..11863186,11865056..11865351)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-008" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /note="match: cDNAs: Em:AY046565.1" FT mRNA complement(join(<11861262..11861456,11862938..11863186, FT 11865404..11865993)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-004" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /note="match: ESTs: Em:BX339167.1" FT /note="match: cDNAs: Em:AY046564.1" FT mRNA complement(join(11848351..11850955,11851264..11851383, FT 11852335..11852436,11853964..11854146,11854415..11854595, FT 11854786..11854920,11855155..11855405,11856263..11856456, FT 11860269..11860379,11861218..11861456,11862938..11863186, FT 11863462..11864589,11865437..11865470)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-007" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /note="match: cDNAs: Em:AY046558.1 Em:AY046562.1 FT Em:BC052466.1" FT mRNA complement(join(<11863085..11863186,11863856..11864589, FT 11865437..11865470)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-006" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /note="match: cDNAs: Em:AY046563.1" FT mRNA complement(join(<11863085..11864589,11865437..11865470)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-005" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /note="match: cDNAs: Em:AY046561.1" FT mRNA complement(join(11846660..11850955,11851264..11851383, FT 11852335..11852436,11853964..11854146,11854415..11854595, FT 11854786..11854920,11855155..11855405,11856263..11856456, FT 11860269..11860379,11861218..11861456,11862938..11863186, FT 11865945..11866115)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-002" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT /note="match: ESTs: Em:AU129663.1 Em:AW502770.1 FT Em:BQ924752.1 Em:BX424988.1 Em:CD243345.1 Em:CD251815.1 FT Em:CF143225.1" FT /note="match: cDNAs: Em:BC011614.2 Em:BC018766.1 FT Em:BC053509.1" FT mRNA complement(join(<11863085..11863186,11865945..11866977)) FT /gene="MTHFR" FT /locus_tag="RP11-56N19.4-003" FT /product="5,10-methylenetetrahydrofolate reductase (NADPH)" FT mRNA join(11866268..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12603..12735, FT AL021155.1:13620..13733,AL021155.1:13972..14138, FT AL021155.1:14710..14836,AL021155.1:19029..19152, FT AL021155.1:19391..19544,AL021155.1:19750..19909, FT AL021155.1:19998..20104,AL021155.1:21481..21667, FT AL021155.1:22513..22670,AL021155.1:22857..23013, FT AL021155.1:23849..23956,AL021155.1:24049..24174, FT AL021155.1:25657..28658) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-001" FT /product="chloride channel 6" FT /note="match: ESTs: Em:AA772135.1 Em:AA855134.1 FT Em:AI186449.1 Em:AI884613.1 Em:AL047523.1 Em:AL110398.1 FT Em:AL597766.1 Em:AL707580.1 Em:AL707709.1 Em:AL707784.1 FT Em:AW172703.1 Em:AW179141.1 Em:AW190376.1 Em:AW382858.1 FT Em:AW410148.1 Em:AW606214.1 Em:AW949917.1 Em:BE278929.1 FT Em:BE407647.1 Em:BE706817.1 Em:BE706835.1 Em:BE735301.1 FT Em:BE903626.1 Em:BF086392.1 Em:BF350547.1 Em:BF350561.1 FT Em:BF350703.1 Em:BF745042.1 Em:BF745675.1 Em:BF745678.1 FT Em:BF745698.1 Em:BF923295.1 Em:BF924916.1 Em:BG026994.1 FT Em:BG826025.1 Em:BI193874.1 Em:BI601330.1 Em:BM049438.1 FT Em:BM674029.1 Em:BM682588.1 Em:BM715574.1 Em:BQ003853.1 FT Em:BQ012884.1 Em:BQ716147.1 Em:BQ720117.1 Em:BQ892374.1 FT Em:BU736714.1 Em:BX113417.1 Em:BX509297.1 Em:BX642754.1 FT Em:CA313082.1 Em:CA454302.1 Em:CA943511.1 Em:CD512783.1 FT Em:CD514270.1 Em:CD655598.1 Em:F03382.1 Em:H08286.1 FT Em:N25443.1 Em:N36430.1 Em:R20538.1 Em:R41299.1" FT /note="match: cDNAs: Em:AF209724.1 Em:D28475.2 Em:X83378.1 FT Em:X99473.1" FT mRNA join(11866270..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:5876..6293) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-006" FT /product="chloride channel 6" FT /note="match: ESTs: Em:BF310828.1" FT mRNA join(11866317..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12603..12735, FT AL021155.1:13620..13733,AL021155.1:13972..14138, FT AL021155.1:14710..14836,AL021155.1:19029..19152, FT AL021155.1:19391..19544,AL021155.1:19750..19909, FT AL021155.1:19998..20104,AL021155.1:21481..21667, FT AL021155.1:22513..22670,AL021155.1:22857..23013, FT AL021155.1:23849..23956,AL021155.1:24049..24564) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-005" FT /product="chloride channel 6" FT /note="match: ESTs: Em:AI802198.1" FT /note="match: cDNAs: Em:BC050457.1" FT CDS join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:5876..5898) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-006" FT /standard_name="OTTHUMP00000002486" FT /product="chloride channel 6" FT /protein_id="CAI15890.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTYKFQMKM" FT mRNA join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11738,AL021155.1:12603..12735, FT AL021155.1:13620..13732) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-002" FT /product="chloride channel 6" FT /note="match: cDNAs: Em:X96391.1" FT CDS join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11738,AL021155.1:12603..12735, FT AL021155.1:13620..13732) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-002" FT /standard_name="OTTHUMP00000002411" FT /product="chloride channel 6" FT /protein_id="CAI15891.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRYGKRQERLCISRSGCWSCCSFRGANRGYLVQSRGGFVLLEPRAHV FT ESALLFHVCHLHPQLLPFWDSVWKLGFLPAPWIAELWRV" FT mRNA join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12629..12735, FT AL021155.1:13620..13732) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-004" FT /product="chloride channel 6" FT /note="match: cDNAs: Em:X99475.1" FT CDS join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12629..12735, FT AL021155.1:13620..13732) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-004" FT /standard_name="OTTHUMP00000002413" FT /product="chloride channel 6" FT /protein_id="CAI15892.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRSGCWSCCSFRGANRGYLVQSRGGFVLLEPRAHVESALLFHVCHLH FT PQLLPFWDSVWKLGFLPAPWIAELWRV" FT mRNA join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12603..12735, FT AL021155.1:13620..13733,AL021155.1:14710..14817) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-003" FT /product="chloride channel 6" FT /note="match: ESTs: Em:AW500326.1" FT /note="match: cDNAs: Em:X99474.1" FT CDS join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12603..12735, FT AL021155.1:13620..13733,AL021155.1:14710..14817) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-003" FT /standard_name="OTTHUMP00000002412" FT /product="chloride channel 6" FT /protein_id="CAI15893.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVL FT FCSMSATFTLNFFRSGIQFGSWGSFQLPGLLNFGEFKSLREPPCVSGNHRGGVCGLDGV FT RRMPTDVLFESNR" FT CDS join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12603..12735, FT AL021155.1:13620..13733,AL021155.1:13972..14138, FT AL021155.1:14710..14836,AL021155.1:19029..19152, FT AL021155.1:19391..19544,AL021155.1:19750..19909, FT AL021155.1:19998..20104,AL021155.1:21481..21667, FT AL021155.1:22513..22670,AL021155.1:22857..23013, FT AL021155.1:23849..23956,AL021155.1:24049..24507) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-005" FT /standard_name="OTTHUMP00000002414" FT /product="chloride channel 6" FT /protein_id="CAI15894.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVL FT FCSMSATFTLNFFRSGIQFGSWGSFQLPGLLNFGEFKCSDSDKKCHLWTAMDLGFFVVM FT GVIGGLLGATFNCLNKRLAKYRMRNVHPKPKLVRVLESLLVSLVTTVVVFVASMVLGEC FT RQMSSSSQIGNDSFQLQVTEDVNSSIKTFFCPNDTYNDMATLFFNPQESAILQLFHQDG FT TFSPVTLALFFVLYFLLACWTYGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLGHIY FT SGTFALIGAAAFLGGVVRMTISLTVILIESTNEITYGLPIMVTLMVAKWTGDFFNKGIY FT DIHVGLRGVPLLEWETEVEMDKLRASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPV FT VTENRGNEKEFMKGNQLISNNIKFKKSSILTRAGEQRKRSQSMKSYPSSELRNMCDEHI FT ASEEPAEKEDLLQQMLERRYTPYPNLYPDQSPSEDWTMEERFRPLTFHGLILRSQLVTL FT LVRGVCYSESQSSASQPRLSYAEMAEDYPRYPDIHDLDLTLLNPRMIVDVTPYMNPSPF FT TVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEVSEAPALPPPLREDPLARCCLCTQASHQ FT KRRHPTRRGECGPTLALNPARLPCTRDPFPCLPADGTSVPLAVLSSQSRASTRLCLPPE FT MLLFTPYHWCSLVLHLRRDLRIR" FT CDS join(11866320..11866406,11867188..11867247, FT 11875903..11875968,AL021155.1:2129..2194, FT AL021155.1:5002..5068,AL021155.1:8209..8315, FT AL021155.1:9221..9347,AL021155.1:10000..10067, FT AL021155.1:11670..11728,AL021155.1:12603..12735, FT AL021155.1:13620..13733,AL021155.1:13972..14138, FT AL021155.1:14710..14836,AL021155.1:19029..19152, FT AL021155.1:19391..19544,AL021155.1:19750..19909, FT AL021155.1:19998..20104,AL021155.1:21481..21667, FT AL021155.1:22513..22670,AL021155.1:22857..23013, FT AL021155.1:23849..23956,AL021155.1:24049..24174, FT AL021155.1:25657..25737) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-001" FT /standard_name="OTTHUMP00000002410" FT /product="chloride channel 6" FT /note="match: proteins: Sw:O35454 Sw:P51797" FT /protein_id="CAI15895.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVL FT FCSMSATFTLNFFRSGIQFGSWGSFQLPGLLNFGEFKCSDSDKKCHLWTAMDLGFFVVM FT GVIGGLLGATFNCLNKRLAKYRMRNVHPKPKLVRVLESLLVSLVTTVVVFVASMVLGEC FT RQMSSSSQIGNDSFQLQVTEDVNSSIKTFFCPNDTYNDMATLFFNPQESAILQLFHQDG FT TFSPVTLALFFVLYFLLACWTYGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLGHIY FT SGTFALIGAAAFLGGVVRMTISLTVILIESTNEITYGLPIMVTLMVAKWTGDFFNKGIY FT DIHVGLRGVPLLEWETEVEMDKLRASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPV FT VTENRGNEKEFMKGNQLISNNIKFKKSSILTRAGEQRKRSQSMKSYPSSELRNMCDEHI FT ASEEPAEKEDLLQQMLERRYTPYPNLYPDQSPSEDWTMEERFRPLTFHGLILRSQLVTL FT LVRGVCYSESQSSASQPRLSYAEMAEDYPRYPDIHDLDLTLLNPRMIVDVTPYMNPSPF FT TVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVGIITRHNLTYEFLQARLRQHYQTI" FT misc_feature 11872543 FT /note="Clone_left_end: RP5-934G17" FT misc_feature 11876543..11982146 FT /note="annotated region of clone" FT mRNA complement(join(11979648..11980389,AL096840.25:647..1500, FT AL096840.25:3216..4434)) FT /gene="KIAA2013" FT /locus_tag="RP5-1077B9.1-002" FT /product="KIAA2013" FT /note="match: ESTs: Em:AI085480.1 Em:AI222785.1 FT Em:BG831606.1 Em:BQ003285.1 Em:BQ431079.1 Em:BU683383.1 FT Em:BU728033.1 Em:BU736590.1 Em:CA307102.1 Em:CA308474.1 FT Em:CA416666.1 Em:CA417785.1" FT /note="match: cDNAs: Em:AL833697.1 Em:AL833891.1 FT Em:BC004501.1 Em:BC035033.1" FT CDS complement(join(11980372..11980389,AL096840.25:647..1500, FT AL096840.25:3216..4248)) FT /gene="KIAA2013" FT /locus_tag="RP5-1077B9.1-002" FT /standard_name="OTTHUMP00000002508" FT /product="KIAA2013" FT /protein_id="CAI23397.1" FT /translation="MWLQQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAG FT GLHLLPWSRGEPGAAEPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAA FT NRLWVTPGEREPAVAPDFVPFVQLRPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPG FT PVAAGPGPASVSGLAAGSGRDCVLLQEDFLAHRGRPHVYLQRIQLNNPTERVAALQTVG FT PTAGPAPKAFTSTLEKVGDHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQVAPKTQL FT DETVLWVVHVSGPINPQVLKSKAAKELKALQDLARKEMLELLDMPAAELLQDHQLLWAQ FT LFSPGVEMKKITDTHTPSGLTVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDH FT CFSGHATMHAENLWPGRLSSVQQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSF FT GGLQFTENHLQFQADPDVLHNSYALHGIRYKNDHINLAVLADAEGKPYLHVSVESRGQP FT VKIYACKAGCLDEPVELTSAPTGHTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAI FT LAHDEHMAQQDPGLPFLFWFSVASLITLFHLFLFKLIYNEYCGPGAKPLFRSKEDPSV" FT mRNA complement(join(11882854..11883243,11883296..11883337)) FT /locus_tag="RP5-934G17.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AV705132.1" FT mRNA join(11889906..11890327,11893572..11893695, FT 11893934..11894087,11894293..11894365) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-007" FT /product="chloride channel 6" FT /note="match: ESTs: Em:BG718863.1 Em:BG720007.1 FT Em:BI459619.1" FT polyA_signal 11899088..11899093 FT polyA_site 11899107 FT mRNA join(11901074..11901264,11903761..11904130, FT 11905604..11905823,11907491..11907741) FT /locus_tag="RP5-934G17.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG537087.1 Em:BM557724.1 FT Em:BQ776822.1 Em:CA773133.1" FT polyA_signal 11903168..11903173 FT polyA_site 11903201 FT mRNA join(11903918..11904130,11905604..11905823, FT 11907634..11908136) FT /locus_tag="RP5-934G17.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM709065.1 Em:BU732528.1 FT Em:CD368210.1" FT polyA_site complement(11905766) FT polyA_signal complement(11905792..11905797) FT CDS complement(join(11906066..11906071,11907170..11907469)) FT /gene="NPPA" FT /locus_tag="RP5-934G17.4-002" FT /standard_name="OTTHUMP00000002505" FT /product="natriuretic peptide precursor A" FT /protein_id="CAA15955.2" FT /translation="MPLEDEVVPPQVLSEPNEEAGAALSPLPEVPPWTGEVSPAQRDGG FT ALGRGPWDSSDRSALLKSKLRALLTAPRSLRRSSCFGGRMDRIGAQSGLGCNSFRY" FT mRNA complement(join(11905766..11906071,11907170..11907496, FT 11907619..11907840)) FT /gene="NPPA" FT /locus_tag="RP5-934G17.4-001" FT /product="natriuretic peptide precursor A" FT /note="match: ESTs: Em:AA121523.1 Em:AA779538.1 FT Em:AI191320.1 Em:AI571745.1 Em:AW015172.1 Em:AW024316.1 FT Em:AW953653.1 Em:BE467951.1 Em:BE670701.1 Em:BF435412.1 FT Em:BF674025.1 Em:BG182796.1 Em:BG194878.1 Em:BG215616.1 FT Em:BI832557.1 Em:BX282388.1 Em:N80587.1 Em:N92931.1 FT Em:T28714.1 Em:W07709.1" FT /note="match: cDNAs: Em:BC005893.1 Em:M30262.1" FT CDS complement(join(11906066..11906071,11907170..11907496, FT 11907619..11907741)) FT /gene="NPPA" FT /locus_tag="RP5-934G17.4-001" FT /standard_name="OTTHUMP00000002504" FT /product="natriuretic peptide precursor A" FT /note="match: proteins: Sw:P01160 Tr:P01160" FT /protein_id="CAI23398.1" FT /translation="MSSFSTTTVSFLLLLAFQLLGQTRANPMYNAVSNADLMDFKNLLD FT HLEEKMPLEDEVVPPQVLSEPNEEAGAALSPLPEVPPWTGEVSPAQRDGGALGRGPWDS FT SDRSALLKSKLRALLTAPRSLRRSSCFGGRMDRIGAQSGLGCNSFRY" FT mRNA complement(join(11905936..11906071,11907170..11907496, FT 11908138..11908402)) FT /gene="NPPA" FT /locus_tag="RP5-934G17.4-002" FT /product="natriuretic peptide precursor A" FT /note="match: ESTs: Em:AA127620.1 Em:BM711189.1" FT polyA_site complement(11917521) FT polyA_signal complement(11917540..11917545) FT mRNA complement(join(11917521..11917728,11918271..11918526, FT 11918759..11918988)) FT /gene="NPPB" FT /locus_tag="RP5-934G17.5-001" FT /product="natriuretic peptide precursor B" FT /note="match: ESTs: Em:AA216038.1 Em:AA216138.1 FT Em:AA216173.1 Em:AI186050.1 Em:AI634108.1 Em:AI656014.1 FT Em:AI968649.1 Em:AW197593.1 Em:BF509092.1 Em:BF569474.1 FT Em:BI833353.1 Em:BI834766.1 Em:BI868417.1 Em:BX099547.1 FT Em:N85365.1" FT /note="match: cDNAs: Em:BC025785.1 Em:M25296.1" FT CDS complement(join(11917712..11917728,11918271..11918526, FT 11918759..11918890)) FT /gene="NPPB" FT /locus_tag="RP5-934G17.5-001" FT /standard_name="OTTHUMP00000002506" FT /product="natriuretic peptide precursor B" FT /note="match: proteins: Sw:P16860" FT /protein_id="CAA15956.1" FT /translation="MDPQTAPSRALLLLLFLHLAFLGGRSHPLGSPGSASDLETSGLQE FT QRNHLQGKLSELQVEQTSLEPLQESPRPTGVWKSREVATEGIRGHRKMVLYTLRAPRSP FT KMVQGSGCFGRKMDRISSSSGLGCKVLRRH" FT mRNA complement(join(11917522..11917728,11918271..11918403, FT 11918905..11918957)) FT /gene="NPPB" FT /locus_tag="RP5-934G17.5-002" FT /product="natriuretic peptide precursor B" FT /note="match: ESTs: Em:AW236964.1" FT CDS 11937827..11940463 FT /pseudo FT /locus_tag="RP5-934G17.6-001" FT /product="pseudogene similar to part of SET binding factor FT 1 (SBF1)" FT /note="match: proteins: Sw:O95248" FT mRNA join(AL953897.6:92235..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887146..11887278, FT 11888163..11888276,11888515..11888681,11889253..11889379, FT 11893572..11893695,11893934..11894087,11894293..11894452, FT 11894541..11894647,11896024..11896210,11897056..11897213, FT 11897400..11897556,11898392..11898499,11898592..11898717, FT 11900200..11903201) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-001" FT /product="chloride channel 6" FT /note="match: ESTs: Em:AA772135.1 Em:AA855134.1 FT Em:AI186449.1 Em:AI884613.1 Em:AL047523.1 Em:AL110398.1 FT Em:AL597766.1 Em:AL707580.1 Em:AL707709.1 Em:AL707784.1 FT Em:AW172703.1 Em:AW179141.1 Em:AW190376.1 Em:AW382858.1 FT Em:AW410148.1 Em:AW606214.1 Em:AW949917.1 Em:BE278929.1 FT Em:BE407647.1 Em:BE706817.1 Em:BE706835.1 Em:BE735301.1 FT Em:BE903626.1 Em:BF086392.1 Em:BF350547.1 Em:BF350561.1 FT Em:BF350703.1 Em:BF745042.1 Em:BF745675.1 Em:BF745678.1 FT Em:BF745698.1 Em:BF923295.1 Em:BF924916.1 Em:BG026994.1 FT Em:BG826025.1 Em:BI193874.1 Em:BI601330.1 Em:BM049438.1 FT Em:BM674029.1 Em:BM682588.1 Em:BM715574.1 Em:BQ003853.1 FT Em:BQ012884.1 Em:BQ716147.1 Em:BQ720117.1 Em:BQ892374.1 FT Em:BU736714.1 Em:BX113417.1 Em:BX509297.1 Em:BX642754.1 FT Em:CA313082.1 Em:CA454302.1 Em:CA943511.1 Em:CD512783.1 FT Em:CD514270.1 Em:CD655598.1 Em:F03382.1 Em:H08286.1 FT Em:N25443.1 Em:N36430.1 Em:R20538.1 Em:R41299.1" FT /note="match: cDNAs: Em:AF209724.1 Em:D28475.2 Em:X83378.1 FT Em:X99473.1" FT mRNA join(AL953897.6:92237..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11880419..11880836) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-006" FT /product="chloride channel 6" FT /note="match: ESTs: Em:BF310828.1" FT mRNA join(AL953897.6:92284..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887146..11887278, FT 11888163..11888276,11888515..11888681,11889253..11889379, FT 11893572..11893695,11893934..11894087,11894293..11894452, FT 11894541..11894647,11896024..11896210,11897056..11897213, FT 11897400..11897556,11898392..11898499,11898592..11899107) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-005" FT /product="chloride channel 6" FT /note="match: ESTs: Em:AI802198.1" FT /note="match: cDNAs: Em:BC050457.1" FT CDS join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11880419..11880441) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-006" FT /standard_name="OTTHUMP00000002486" FT /product="chloride channel 6" FT /protein_id="CAI23401.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTYKFQMKM" FT mRNA join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886281,11887146..11887278, FT 11888163..11888275) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-002" FT /product="chloride channel 6" FT /note="match: cDNAs: Em:X96391.1" FT CDS join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886281,11887146..11887278, FT 11888163..11888275) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-002" FT /standard_name="OTTHUMP00000002411" FT /product="chloride channel 6" FT /protein_id="CAI23402.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRYGKRQERLCISRSGCWSCCSFRGANRGYLVQSRGGFVLLEPRAHV FT ESALLFHVCHLHPQLLPFWDSVWKLGFLPAPWIAELWRV" FT mRNA join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887172..11887278, FT 11888163..11888275) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-004" FT /product="chloride channel 6" FT /note="match: cDNAs: Em:X99475.1" FT CDS join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887172..11887278, FT 11888163..11888275) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-004" FT /standard_name="OTTHUMP00000002413" FT /product="chloride channel 6" FT /protein_id="CAI23403.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRSGCWSCCSFRGANRGYLVQSRGGFVLLEPRAHVESALLFHVCHLH FT PQLLPFWDSVWKLGFLPAPWIAELWRV" FT mRNA join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887146..11887278, FT 11888163..11888276,11889253..11889360) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-003" FT /product="chloride channel 6" FT /note="match: ESTs: Em:AW500326.1" FT /note="match: cDNAs: Em:X99474.1" FT CDS join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887146..11887278, FT 11888163..11888276,11889253..11889360) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-003" FT /standard_name="OTTHUMP00000002412" FT /product="chloride channel 6" FT /protein_id="CAI23404.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVL FT FCSMSATFTLNFFRSGIQFGSWGSFQLPGLLNFGEFKSLREPPCVSGNHRGGVCGLDGV FT RRMPTDVLFESNR" FT CDS join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887146..11887278, FT 11888163..11888276,11888515..11888681,11889253..11889379, FT 11893572..11893695,11893934..11894087,11894293..11894452, FT 11894541..11894647,11896024..11896210,11897056..11897213, FT 11897400..11897556,11898392..11898499,11898592..11899050) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-005" FT /standard_name="OTTHUMP00000002414" FT /product="chloride channel 6" FT /protein_id="CAI23405.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVL FT FCSMSATFTLNFFRSGIQFGSWGSFQLPGLLNFGEFKCSDSDKKCHLWTAMDLGFFVVM FT GVIGGLLGATFNCLNKRLAKYRMRNVHPKPKLVRVLESLLVSLVTTVVVFVASMVLGEC FT RQMSSSSQIGNDSFQLQVTEDVNSSIKTFFCPNDTYNDMATLFFNPQESAILQLFHQDG FT TFSPVTLALFFVLYFLLACWTYGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLGHIY FT SGTFALIGAAAFLGGVVRMTISLTVILIESTNEITYGLPIMVTLMVAKWTGDFFNKGIY FT DIHVGLRGVPLLEWETEVEMDKLRASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPV FT VTENRGNEKEFMKGNQLISNNIKFKKSSILTRAGEQRKRSQSMKSYPSSELRNMCDEHI FT ASEEPAEKEDLLQQMLERRYTPYPNLYPDQSPSEDWTMEERFRPLTFHGLILRSQLVTL FT LVRGVCYSESQSSASQPRLSYAEMAEDYPRYPDIHDLDLTLLNPRMIVDVTPYMNPSPF FT TVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEVSEAPALPPPLREDPLARCCLCTQASHQ FT KRRHPTRRGECGPTLALNPARLPCTRDPFPCLPADGTSVPLAVLSSQSRASTRLCLPPE FT MLLFTPYHWCSLVLHLRRDLRIR" FT CDS join(AL953897.6:92287..92373,AL953897.6:93155..93214, FT AL953897.6:101870..101935,11876672..11876737, FT 11879545..11879611,11882752..11882858,11883764..11883890, FT 11884543..11884610,11886213..11886271,11887146..11887278, FT 11888163..11888276,11888515..11888681,11889253..11889379, FT 11893572..11893695,11893934..11894087,11894293..11894452, FT 11894541..11894647,11896024..11896210,11897056..11897213, FT 11897400..11897556,11898392..11898499,11898592..11898717, FT 11900200..11900280) FT /gene="CLCN6" FT /locus_tag="RP5-934G17.1-001" FT /standard_name="OTTHUMP00000002410" FT /product="chloride channel 6" FT /note="match: proteins: Sw:O35454 Sw:P51797" FT /protein_id="CAI23406.1" FT /translation="MAGCRGSLCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPR FT KDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLVGLFVDFFVRL FT FTQLKFGVVQTSVEECSQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEVK FT CYLNGVKVPGIVRLRTLLCKVLGVLFSVAGGLFVEKEGPMIHSGSVVGAGLPQFQSISL FT RKIQFNFPYFRSDRDKRDFVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVL FT FCSMSATFTLNFFRSGIQFGSWGSFQLPGLLNFGEFKCSDSDKKCHLWTAMDLGFFVVM FT GVIGGLLGATFNCLNKRLAKYRMRNVHPKPKLVRVLESLLVSLVTTVVVFVASMVLGEC FT RQMSSSSQIGNDSFQLQVTEDVNSSIKTFFCPNDTYNDMATLFFNPQESAILQLFHQDG FT TFSPVTLALFFVLYFLLACWTYGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLGHIY FT SGTFALIGAAAFLGGVVRMTISLTVILIESTNEITYGLPIMVTLMVAKWTGDFFNKGIY FT DIHVGLRGVPLLEWETEVEMDKLRASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPV FT VTENRGNEKEFMKGNQLISNNIKFKKSSILTRAGEQRKRSQSMKSYPSSELRNMCDEHI FT ASEEPAEKEDLLQQMLERRYTPYPNLYPDQSPSEDWTMEERFRPLTFHGLILRSQLVTL FT LVRGVCYSESQSSASQPRLSYAEMAEDYPRYPDIHDLDLTLLNPRMIVDVTPYMNPSPF FT TVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVGIITRHNLTYEFLQARLRQHYQTI" FT polyA_site complement(11979648) FT polyA_signal complement(11979665..11979670) FT misc_feature 11982147..12108571 FT /note="annotated region of clone" FT mRNA complement(join(11982232..11983546,11985262..11986485)) FT /gene="KIAA2013" FT /locus_tag="RP5-1077B9.1-001" FT /product="KIAA2013" FT /note="match: ESTs: Em:AA861083.1 Em:AI523600.1 FT Em:AI587180.1 Em:AI694391.1 Em:AI799455.1 Em:AI914275.1 FT Em:AI953092.1 Em:BE539326.1 Em:BE614809.1 Em:BE742762.1 FT Em:BF338486.1 Em:BF982395.1 Em:BG122680.1 Em:BG253824.1 FT Em:BG324357.1 Em:BI160795.1 Em:BI195819.1 Em:BI550477.1 FT Em:BM800802.1 Em:BQ072567.1 Em:BU552995.1 Em:BU944107.1 FT Em:BX461344.1 Em:CA443798.1 Em:CB960733.1 Em:CB990051.1 FT Em:R17600.1" FT /note="match: cDNAs: Em:AB095933.1" FT CDS complement(join(11982576..11983546,11985262..11986294)) FT /gene="KIAA2013" FT /locus_tag="RP5-1077B9.1-001" FT /standard_name="OTTHUMP00000002507" FT /product="KIAA2013" FT /note="match: proteins: Tr:Q8IVF8" FT /protein_id="CAI19081.1" FT /translation="MWLQQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAG FT GLHLLPWSRGEPGAAEPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAA FT NRLWVTPGEREPAVAPDFVPFVQLRPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPG FT PVAAGPGPASVSGLAAGSGRDCVLLQEDFLAHRGRPHVYLQRIQLNNPTERVAALQTVG FT PTAGPAPKAFTSTLEKVGDHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQVAPKTQL FT DETVLWVVHVSGPINPQVLKSKAAKELKALQDLARKEMLELLDMPAAELLQDHQLLWAQ FT LFSPGVEMKKITDTHTPSGLTVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDH FT CFSGHATMHAENLWPGRLSSVQQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSF FT GGLQFTENHLQFQADPDVLHNSYALHGIRYKNDHINLAVLADAEGKPYLHVSVESRGQP FT VKIYACKAGCLDEPVELTSAPTGHTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAI FT LAHDEHMAQQDPGLPFLFWFSVASLITLFHLFLFKLIYNEYCGPGAKPLFRSKVGSRHL FT VETRGLGLALSPVSRKGLAWRGGVRPGQEWVS" FT mRNA complement(join(AL021155.1:105105..105846, FT 11982693..11983546,11985262..11986480)) FT /gene="KIAA2013" FT /locus_tag="RP5-1077B9.1-002" FT /product="KIAA2013" FT /note="match: ESTs: Em:AI085480.1 Em:AI222785.1 FT Em:BG831606.1 Em:BQ003285.1 Em:BQ431079.1 Em:BU683383.1 FT Em:BU728033.1 Em:BU736590.1 Em:CA307102.1 Em:CA308474.1 FT Em:CA416666.1 Em:CA417785.1" FT /note="match: cDNAs: Em:AL833697.1 Em:AL833891.1 FT Em:BC004501.1 Em:BC035033.1" FT CDS complement(join(AL021155.1:105829..105846, FT 11982693..11983546,11985262..11986294)) FT /gene="KIAA2013" FT /locus_tag="RP5-1077B9.1-002" FT /standard_name="OTTHUMP00000002508" FT /product="KIAA2013" FT /protein_id="CAI19082.1" FT /translation="MWLQQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAG FT GLHLLPWSRGEPGAAEPSACLEAATRAWRGLRERGEVVPLGPGVPALVANGFLALDVAA FT NRLWVTPGEREPAVAPDFVPFVQLRPLSALAEAGEAVLLLREGLLRRVRCLQLGSPGPG FT PVAAGPGPASVSGLAAGSGRDCVLLQEDFLAHRGRPHVYLQRIQLNNPTERVAALQTVG FT PTAGPAPKAFTSTLEKVGDHQFLLYSGRSPPTPTGLVHLVVVAAKKLVNRLQVAPKTQL FT DETVLWVVHVSGPINPQVLKSKAAKELKALQDLARKEMLELLDMPAAELLQDHQLLWAQ FT LFSPGVEMKKITDTHTPSGLTVNLTLYYMLSCSPAPLLSPSLSHRERDQMESTLNYEDH FT CFSGHATMHAENLWPGRLSSVQQILQLSDLWRLTLQKRGCKGLVKVGAPGILQGMVLSF FT GGLQFTENHLQFQADPDVLHNSYALHGIRYKNDHINLAVLADAEGKPYLHVSVESRGQP FT VKIYACKAGCLDEPVELTSAPTGHTFSVMVTQPITPLLYISTDLTHLQDLRHTLHLKAI FT LAHDEHMAQQDPGLPFLFWFSVASLITLFHLFLFKLIYNEYCGPGAKPLFRSKEDPSV" FT mRNA join(11994262..11994380,12008033..12008124, FT 12009830..12009963,12010414..12010577,12012680..12012792, FT 12014887..12014950,12016974..12017071,12017899..12018000, FT 12018573..12018677) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-004" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:BX441265.1 Em:BX444898.1" FT mRNA join(11994751..11994912,12004579..12004719, FT 12008033..12008124,12009830..12009963,12010414..12010577, FT 12012680..>12012748) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-005" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:CD109480.1" FT mRNA join(11994791..11994912,12008033..12008124, FT 12009830..12009963,12010414..12010577,12012680..12012792, FT 12014631..12014824) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-006" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:AL547816.2" FT mRNA join(11994800..11994912,12008033..12008124, FT 12009830..12009963,12010414..12010577,12012680..12012792, FT 12014887..12014950,12017147..12017250,12017899..>12018001) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-003" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:CA488762.1" FT mRNA join(11994810..11994912,12008033..12008124, FT 12009830..12009963,12010414..12010577,12012680..12012792, FT 12014887..12014950,12016974..12017071,12017899..12018000, FT 12018573..12018704,12020703..12020824,12023589..12023693, FT 12024232..12024357,12024701..12024842,12025537..12025650, FT 12026308..12026373,12027044..12027148,12030727..12030873, FT 12032929..12033054,12034710..12035594) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-001" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:AA341740.1 Em:AL047837.1 FT Em:AL525419.2 Em:AL526205.2 Em:AL556481.2 Em:AU121477.1 FT Em:AU127805.1 Em:AU130101.1 Em:AU139472.1 Em:AU280200.1 FT Em:AW068674.1 Em:AW362993.1 Em:AW370562.1 Em:AW373818.1 FT Em:BE074662.1 Em:BE074756.1 Em:BE273153.1 Em:BE273357.1 FT Em:BE275766.1 Em:BE315457.1 Em:BE409444.1 Em:BE546005.1 FT Em:BE744435.1 Em:BE747914.1 Em:BE877883.1 Em:BF034879.1 FT Em:BF125067.1 Em:BF530079.1 Em:BF689682.1 Em:BF983548.1 FT Em:BG106097.1 Em:BG164427.1 Em:BG326560.1 Em:BG327090.1 FT Em:BG334838.1 Em:BG419859.1 Em:BG420267.1 Em:BG422779.1 FT Em:BG489960.1 Em:BG745322.1 Em:BG766323.1 Em:BG831790.1 FT Em:BI600084.1 Em:BI603237.1 Em:BI670174.1 Em:BI820963.1 FT Em:BI911815.1 Em:BM452961.1 Em:BM546895.1 Em:BM835501.1 FT Em:BM835828.1 Em:BM921973.1 Em:BQ059272.1 Em:BQ064845.1 FT Em:BQ068349.1 Em:BQ648283.1 Em:BQ680631.1 Em:BQ681852.1 FT Em:BQ707606.1 Em:BQ712384.1 Em:BQ717325.1 Em:BQ891616.1 FT Em:BQ893149.1 Em:BQ959275.1 Em:BU172029.1 Em:BU502525.1 FT Em:BU556556.1 Em:BU844557.1 Em:BU845163.1 Em:BU848867.1 FT Em:BU854981.1 Em:BU931844.1 Em:BU941916.1 Em:BX350592.1 FT Em:BX384758.1 Em:BX461154.1 Em:CA454729.1 Em:CA454973.1 FT Em:CA487450.1 Em:CA488222.1 Em:CA495386.1 Em:CB130818.1 FT Em:CB150060.1 Em:CB989561.1 Em:CB990076.1 Em:CD519033.1 FT Em:CF265123.1" FT /note="match: cDNAs: Em:BC016657.1 Em:L06419.1 Em:M98252.1" FT CDS join(11994837..11994912,12004579..12004719, FT 12008033..12008124,12009830..12009963,12010414..12010577, FT 12012680..>12012748) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-005" FT /standard_name="OTTHUMP00000002514" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /protein_id="CAI19083.1" FT /translation="MRPLLLLALLGWLLLAEAKGDAKPEAPCCQEGLRAGGSGSLHLGR FT DFTVLAGARGSPSPSVSSIPRFWIPGSDNLLVLTVATKETEGFRRFKRSAQFFNYKIQA FT LGLGEDWNVEKGTSAGGGQKVRLLKKALEKHADKEDLVILFADSYDVLFASGPRELLKK FT FRQARSQVVFSAEELIYPDRRLETKYPVVSDGKRFLGSGGFIGYAPNLSKLVAEWEGQD FT SDS" FT CDS join(11994837..11994912,12008033..12008124, FT 12009830..12009963,12010414..12010577,12012680..12012792, FT 12014631..12014651) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-006" FT /standard_name="OTTHUMP00000002515" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /protein_id="CAI19084.1" FT /translation="MRPLLLLALLGWLLLAEAKGDAKPEDNLLVLTVATKETEGFRRFK FT RSAQFFNYKIQALGLGEDWNVEKGTSAGGGQKVRLLKKALEKHADKEDLVILFADSYDV FT LFASGPRELLKKFRQARSQVVFSAEELIYPDRRLETKYPVVSDGKRFLGSGGFIGYAPN FT LSKLVAEWEGQDSDSDQLFYTKIFLDPEKRVSRLHS" FT CDS join(11994837..11994912,12008033..12008124, FT 12009830..12009963,12010414..12010577,12012680..12012792, FT 12014887..12014950,12017147..12017250,12017899..>12018001) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-003" FT /standard_name="OTTHUMP00000002513" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /protein_id="CAI19085.1" FT /translation="MRPLLLLALLGWLLLAEAKGDAKPEDNLLVLTVATKETEGFRRFK FT RSAQFFNYKIQALGLGEDWNVEKGTSAGGGQKVRLLKKALEKHADKEDLVILFADSYDV FT LFASGPRELLKKFRQARSQVVFSAEELIYPDRRLETKYPVVSDGKRFLGSGGFIGYAPN FT LSKLVAEWEGQDSDSDQLFYTKIFLDPEKREQINITLDHRCRIFQNLDGALVSPWGQGH FT LPGACYELTASVLTSELSVMPSFPAVVLQLNYLGNYIPRFWTFETGCTVCDEGLRSLKG FT IG" FT CDS join(11994837..11994912,12008033..12008124, FT 12009830..12009963,12010414..12010577,12012680..12012792, FT 12014887..12014950,12016974..12017071,12017899..12018000, FT 12018573..12018704,12020703..12020824,12023589..12023693, FT 12024232..12024357,12024701..12024842,12025537..12025650, FT 12026308..12026373,12027044..12027148,12030727..12030873, FT 12032929..12033054,12034710..12034865) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-001" FT /standard_name="OTTHUMP00000002512" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: proteins: Sw:O77588 Sw:P24802 Sw:Q02809 FT Sw:Q63321 Sw:Q9R0E2" FT /protein_id="CAC19722.1" FT /translation="MRPLLLLALLGWLLLAEAKGDAKPEDNLLVLTVATKETEGFRRFK FT RSAQFFNYKIQALGLGEDWNVEKGTSAGGGQKVRLLKKALEKHADKEDLVILFADSYDV FT LFASGPRELLKKFRQARSQVVFSAEELIYPDRRLETKYPVVSDGKRFLGSGGFIGYAPN FT LSKLVAEWEGQDSDSDQLFYTKIFLDPEKREQINITLDHRCRIFQNLDGALDEVVLKFE FT MGHVRARNLAYDTLPVLIHGNGPTKLQLNYLGNYIPRFWTFETGCTVCDEGLRSLKGIG FT DEALPTVLVGVFIEQPTPFVSLFFQRLLRLHYPQKHMRLFIHNHEQHHKAQVEEFLAQH FT GSEYQSVKLVGPEVRMANADARNMGADLCRQDRSCTYYFSVDADVALTEPNSLRLLIQQ FT NKNVIAPLMTRHGRLWSNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYISNIYLIK FT GSALRGELQSSDLFHHSKLDPDMAFCANIRQQDVFMFLTNRHTLGHLLSLDSYRTTHLH FT NDLWEVFSNPEDWKEKYIHQNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHF FT GQWSLGNNKDNRIQGGYENVPTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRA FT QFDLAFVVRYKPDEQPSLMPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPRK FT GWTLMHPGRLTHYHEGLPTTRGTRYIAVSFVDP" FT mRNA join(12014358..12014950,12016974..12017071, FT 12017899..12018000,12018573..12018650) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-007" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:BQ923766.1" FT mRNA join(12024745..12024842,12025537..12025650, FT 12026308..12026373,12027044..12027148,12035340..12035595) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-009" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:CA425349.1" FT mRNA join(12024759..12024842,12025537..12025650, FT 12026308..12026471) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-010" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:BF095474.1" FT mRNA join(12026306..12026373,12027044..12027148, FT 12035407..12035599) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-008" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: ESTs: Em:AI654855.1" FT mRNA join(12031600..12033054,12034710..12035593) FT /gene="PLOD1" FT /locus_tag="RP5-1077B9.2-002" FT /product="procollagen-lysine 1, 2-oxoglutarate FT 5-dioxygenase 1" FT /note="match: cDNAs: Em:AK124035.1" FT polyA_signal 12035575..12035580 FT polyA_site 12035594 FT mRNA join(12040356..12040541,12041867..12041910, FT 12042027..12042171,12049222..12049291) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-003" FT /product="mitofusin 2" FT /note="match: ESTs: Em:AL704765.1" FT mRNA join(12040369..12040541,12042027..12042171, FT 12049222..12049400,12052612..12052747,12056213..12056375, FT 12057354..12057478,12058827..12058935,12059045..12059152, FT 12061458..12061611,12061826..12061893,12062039..12062160, FT 12064049..12064175,12064566..12064670,12064882..12064984, FT 12065768..12065988,12066595..12066750,12067110..12067306, FT 12069649..12069783,12071553..12073565) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-001" FT /product="mitofusin 2" FT /note="match: ESTs: Em:AA291738.1 Em:AA398266.1 FT Em:AA653123.1 Em:AA700751.1 Em:AI360344.1 Em:AI394500.1 FT Em:AI814439.1 Em:AL528723.2 Em:AL563237.2 Em:AL598479.1 FT Em:AL698691.1 Em:AL708607.1 Em:AL708626.1 Em:AU120036.1 FT Em:AU123584.1 Em:AV656238.1 Em:BE741050.1 Em:BE743660.1 FT Em:BE791050.1 Em:BE795735.1 Em:BF796474.1 Em:BF868523.1 FT Em:BF966056.1 Em:BG254329.1 Em:BG324078.1 Em:BG676277.1 FT Em:BG678721.1 Em:BG767614.1 Em:BG769661.1 Em:BG988089.1 FT Em:BI561669.1 Em:BI670272.1 Em:BI917163.1 Em:BM193882.1 FT Em:BM458475.1 Em:BM552149.1 Em:BM556753.1 Em:BM556764.1 FT Em:BM671404.1 Em:BM827849.1 Em:BM975172.1 Em:BQ052633.1 FT Em:BQ073814.1 Em:BQ217793.1 Em:BQ420594.1 Em:BQ439956.1 FT Em:BQ690317.1 Em:BU154794.1 Em:BU176993.1 Em:BU178912.1 FT Em:BU431615.1 Em:BU528926.1 Em:BU621097.1 Em:BU849060.1 FT Em:BX402058.1 Em:BX402059.1 Em:BX484966.1 Em:BX496351.1 FT Em:CA312874.1 Em:CB989381.1 Em:CD358981.1 Em:CD365275.1 FT Em:CD642727.1 Em:CD643998.1 Em:CD683580.1 Em:CF264947.1" FT /note="match: cDNAs: Em:AF036536.2 Em:AK001189.1 FT Em:AL137666.1 Em:BC017061.1 Em:D86987.1" FT mRNA join(12040369..12040541,12042027..12042171, FT 12049222..12049362,12061826..12061893,12062039..12062160, FT 12064049..12064175,12064566..12064670,12064882..12064984, FT 12065768..12065988,12066595..12066750,12067110..12067306, FT 12069649..12069691,12073363..12073567) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-002" FT /product="mitofusin 2" FT /note="match: cDNAs: Em:AK021947.1" FT mRNA join(12040427..12040541,12049222..12049400) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-004" FT /product="mitofusin 2" FT /note="match: ESTs: Em:AU098936.1 Em:BU598227.1" FT mRNA join(12040492..12040541,12042027..12042171, FT 12049222..12049400,12052336..12052520,12052612..12052697) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-006" FT /product="mitofusin 2" FT /note="match: ESTs: Em:AL703933.1 Em:AL704859.1 FT Em:BG723252.1" FT mRNA join(12042049..12042171,12042580..12042647, FT 12049222..12049400,12052612..>12052730) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-005" FT /product="mitofusin 2" FT /note="match: ESTs: Em:AL118966.1" FT CDS join(12049226..12049400,12052612..>12052730) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-005" FT /standard_name="OTTHUMP00000002511" FT /product="mitofusin 2" FT /protein_id="CAI19086.1" FT /translation="MSLLFSRCNSIVTVKKNKRHMAEVNASPLKHFVTAKKKINGIFEQ FT LGAYIQESATFLEDTYRNAELDPVTTEEQVLDVKGYLSKVRGISEVLARRHMK" FT CDS join(12049226..12049400,12052612..12052747, FT 12056213..12056375,12057354..12057478,12058827..12058935, FT 12059045..12059152,12061458..12061611,12061826..12061893, FT 12062039..12062160,12064049..12064175,12064566..12064670, FT 12064882..12064984,12065768..12065988,12066595..12066750, FT 12067110..12067306,12069649..12069783,12071553..12071622) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-001" FT /standard_name="OTTHUMP00000002509" FT /product="mitofusin 2" FT /note="match: proteins: Sw:O95140 Sw:Q80U63 Sw:Q8R500" FT /protein_id="CAI19087.2" FT /translation="MSLLFSRCNSIVTVKKNKRHMAEVNASPLKHFVTAKKKINGIFEQ FT LGAYIQESATFLEDTYRNAELDPVTTEEQVLDVKGYLSKVRGISEVLARRHMKVAFFGR FT TSNGKSTVINAMLWDKVLPSGIGHTTNCFLRVEGTDGHEAFLLTEGSEEKRSAKTVNQL FT AHALHQDKQLHAGSLVSVMWPNSKCPLLKDDLVLMDSPGIDVTTELDSWIDKFCLDADV FT FVLVANSESTLMQTEKHFFHKVSERLSRPNIFILNNRWDASASEPEYMEEVRRQHMERC FT TSFLVDELGVVDRSQAGDRIFFVSAKEVLNARIQKAQGMPEGGGALAEGFQVRMFEFQN FT FERRFEECISQSAVKTKFEQHTVRAKQIAEAVRLIMDSLHMAAREQQVYCEEMREERQD FT RLKFIDKQLELLAQDYKLRIKQITEEVERQVSTAMAEEIRRLSVLVDDYQMDFHPSPVV FT LKVYKNELHRHIEEGLGRNMSDRCSTAITNSLQTMQQDMIDGLKPLLPVSVRSQIDMLV FT PRQCFSLNYDLNCDKLCADFQEDIEFHFSLGWTMLVNRFLGPKNSRRALMGYNDQVQRP FT IPLTPANPSMPPLPQGSLTQEEFMVSMVTGLASLTSRTSMGILVVGGVVWKAVGWRLIA FT LSFGLYGLLYVYERLTWTTKAKERAFKRQFVEHASEKLQLVISYTGSNCSHQVQQELSG FT TFAHLCQQVDVTRENLEQEIAAMNKKIEVLDSLQSKAKLLRNKAGWLDSELNMFTHQYL FT QPSR" FT CDS join(12049299..12049362,12061826..12061893, FT 12062039..12062160,12064049..12064175,12064566..12064670, FT 12064882..12064984,12065768..12065988,12066595..12066750, FT 12067110..12067306,12069649..12069691,12073363..12073467) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-002" FT /standard_name="OTTHUMP00000002510" FT /product="mitofusin 2" FT /protein_id="CAI19088.2" FT /translation="MHPHLSTLSLPRRRSMAFLSSWGALAEGFQVRMFEFQNFERRFEE FT CISQSAVKTKFEQHTVRAKQIAEAVRLIMDSLHMAAREQQVYCEEMREERQDRLKFIDK FT QLELLAQDYKLRIKQITEEVERQVSTAMAEEIRRLSVLVDDYQMDFHPSPVVLKVYKNE FT LHRHIEEGLGRNMSDRCSTAITNSLQTMQQDMIDGLKPLLPVSVRSQIDMLVPRQCFSL FT NYDLNCDKLCADFQEDIEFHFSLGWTMLVNRFLGPKNSRRALMGYNDQVQRPIPLTPAN FT PSMPPLPQGSLTQEEFMVSMVTGLASLTSRTSMGILVVGGVVWKAVGWRLIALSFGLYG FT LLYVYERLTWTTKAKERAFKRQFVEHASEKLQLVISYTGSNCSHQVQQELSGTFAHLCQ FT QVDGETLSERSMAKSTLMLLTLLFLCSFAGAQDVLTQ" FT mRNA join(12067109..12067310,12072975..12073268) FT /gene="MFN2" FT /locus_tag="RP5-1077B9.3-007" FT /product="mitofusin 2" FT /note="match: ESTs: Em:H58349.1" FT polyA_signal 12073544..12073549 FT polyA_site 12073572 FT mRNA join(12079523..12079609,12082152..12082499, FT 12082890..12082974,12089090..12089198,12089280..12089338, FT 12089822..12089912) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-003" FT /product="novel protein" FT /note="match: ESTs: Em:BE904715.1 Em:BI771022.1" FT mRNA join(12079523..12079609,12081702..12081897, FT 12082152..12082499,12082890..12082974,12089090..12089198, FT 12089280..12089338,12089822..12089951,12090085..12090181, FT 12091323..12091460,12091779..12092102) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:AI421692.1 Em:AI491978.1 FT Em:AI568642.1 Em:AL522410.2 Em:AL523368.2 Em:AL523615.2 FT Em:AL555255.2 Em:AL581952.2 Em:AU122847.1 Em:BE551888.1 FT Em:BE733975.1 Em:BF036421.1 Em:BG332948.1 Em:BG477721.1 FT Em:BG536799.1 Em:BG762749.1 Em:BG831985.1 Em:BI488563.1 FT Em:BI518713.1 Em:BI668691.1 Em:BI754139.1 Em:BI761987.1 FT Em:BI822495.1 Em:BI828925.1 Em:BI829186.1 Em:BI910973.1 FT Em:BM458522.1 Em:BM545037.1 Em:BM560885.1 Em:BM681847.1 FT Em:BM804687.1 Em:BM920391.1 Em:BQ067861.1 Em:BQ072531.1 FT Em:BQ225309.1 Em:BX112932.1 Em:BX336813.1 Em:BX357349.1 FT Em:BX362719.1 Em:BX401006.1 Em:BX424194.1 Em:CA309020.1 FT Em:CD513300.1 Em:CF272255.1" FT /note="match: cDNAs: Em:AK022500.1 Em:AK024020.1 FT Em:BC008068.1 Em:BC008068.2" FT CDS join(12081784..12081897,12082152..12082499, FT 12082890..12082974,12089090..12089198,12089280..12089338, FT 12089822..12089951,12090085..12090181,12091323..12091460, FT 12091779..12091865) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-001" FT /standard_name="OTTHUMP00000002537" FT /product="novel protein" FT /note="match: proteins: Tr:Q9H839" FT /protein_id="CAI19089.1" FT /translation="MVEAEELAQLRLLNLELLRQLWVGQDAVRRSVARAASESSLESSS FT SYNSETPSTPETSSTSLSTSCPRGRSSVWGPPDACRGDLRDVARSGVASLPPAKCQHQE FT SLGRPRPHSAPSLGTSSLRDPEPSGRLGDPGPQEAQTPRSILAQQSKLSKPRVTFSEES FT AVPKRSWRLRPYLGYDWIAGSLDTSSSITSQPEAFFSKLQEFRETNKEECICSHPEPQL FT PGLRESSGSGVEEDHECVYCYRVNRRLFPVPVDPGTPCRLCRTPRDQQGPGTLAQPAHV FT RVSIPLSILEPPHRYHIHRRKSFDASDTLALPRHCLLGWDIFPPKSEKSSAPRNLDLWS FT SVSAEAQHQKLSGTSSPFHPASPMQMLPPTPTWSVPQVPRPHVPRQKP" FT mRNA join(12082279..12082499,12082890..12082974, FT 12089090..12089198,12089280..12090181,12091323..12091460, FT 12091779..12092032) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-004" FT /product="novel protein" FT /note="match: ESTs: Em:AL580424.2 Em:BG473605.1 FT Em:BI519769.1 Em:BM922582.1 Em:BQ082397.1 Em:BU684621.1 FT Em:CA446531.1 Em:CD519166.1 Em:CD558963.1 Em:CD580080.1" FT mRNA join(12082921..12082974,12089090..12089198, FT 12089280..12089951,12090085..12090181,12091323..12091460, FT 12091779..12092100) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-002" FT /product="novel protein" FT /note="match: cDNAs: Em:AK095928.1" FT misc_feature 12085318 FT /note="Clone_left_end: RP11-426M1" FT mRNA join(12088778..12089198,12089280..12089664) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-005" FT /product="novel protein" FT /note="match: ESTs: Em:BQ709620.1" FT mRNA join(12089153..12089198,12089280..12089338, FT 12089822..12089951,12090085..12090181,12091323..12091460, FT 12091598..12092082) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-006" FT /product="novel protein" FT /note="match: ESTs: Em:AW275937.1 Em:BX336812.1" FT mRNA join(12091184..12091460,12091779..12092096) FT /gene="RP5-1077B9.4" FT /locus_tag="RP5-1077B9.4-007" FT /product="novel protein" FT /note="match: ESTs: Em:AA523861.1" FT polyA_signal 12092076..12092081 FT polyA_site 12092102 FT misc_feature 12108471 FT /note="Clone_right_end: RP5-1077B9" FT misc_feature 12108572..12258069 FT /note="annotated region of clone" FT mRNA join(12123434..12123718,12144521..12144608, FT 12157158..12157274,12164436..12164588,12169623..12169713, FT 12170098..12170261,12171955..12172071,12175634..12175786, FT 12183341..12183434,12183772..12183884,12186008..12186109, FT 12186240..12186293,12195645..12195670,12198286..12198493, FT 12202344..12204264) FT /gene="TNFRSF8" FT /locus_tag="RP11-426M1.1-001" FT /product="tumor necrosis factor receptor superfamily, FT member 8" FT /note="match: cDNAs: Em:M83554.1 Em:S75768.1" FT /note="match: ESTs: Em:AA928635.1 Em:AI203419.1 FT Em:AI699969.1" FT CDS join(12123656..12123718,12144521..12144608, FT 12157158..12157274,12164436..12164588,12169623..12169713, FT 12170098..12170261,12171955..12172071,12175634..12175786, FT 12183341..12183434,12183772..12183884,12186008..12186109, FT 12186240..12186293,12195645..12195670,12198286..12198493, FT 12202344..12202588) FT /gene="TNFRSF8" FT /locus_tag="RP11-426M1.1-001" FT /standard_name="OTTHUMP00000001783" FT /product="tumor necrosis factor receptor superfamily, FT member 8" FT /note="match: proteins: Sw:P28908 Tr:P28908" FT /protein_id="CAH73719.1" FT /translation="MRVLLAALGLLFLGALRAFPQDRPFEDTCHGNPSHYYDKAVRRCC FT YRCPMGLFPTQQCPQRPTDCRKQCEPDYYLDEADRCTACVTCSRDDLVEKTPCAWNSSR FT VCECRPGMFCSTSAVNSCARCFFHSVCPAGMIVKFPGTAQKNTVCEPASPGVSPACASP FT ENCKEPSSGTIPQAKPTPVSPATSSASTMPVRGGTRLAQEAASKLTRAPDSPSSVGRPS FT SDPGLSPTQPCPEGSGDCRKQCEPDYYLDEAGRCTACVSCSRDDLVEKTPCAWNSSRTC FT ECRPGMICATSATNSRARCVPYPICAAETVTKPQDMAEKDTTFEAPPLGTQPDCNPTPE FT NGEAPASTSPTQSLLVDSQASKTLPIPTSAPVALSSTGKPVLDAGPVLFWVILVLVVVV FT GSSAFLLCHRRACRKRIRQKLHLCYPVQTSQPKLELVDSRPRRSSTQLRSGASVTEPVA FT EERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKI FT YIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVM FT LSVEEEGKEDPLPTAASGK" FT CDS complement(12140308..12140605) FT /pseudo FT /locus_tag="RP11-426M1.2-001" FT /product="ribosomal protein L23a (RPL23A) pseudogene" FT /note="match: proteins: Sw:P62751 Sw:P62752 Tr:Q8ISQ4 FT Tr:Q90YU4 Tr:Q91YK6" FT misc_feature 12144299..12144458 FT /note="Sequence confirmed by AC023251 sequenced by WIBR" FT misc_feature 12151733..12151874 FT /note="Sequence from overlapping clone RP5-1125M11 FT (AL355998). Assembly confirmed by restriction digest" FT mRNA join(12185956..12186109,12186240..12186293, FT 12195645..12195670,12198286..12198493,12202344..12204264) FT /gene="TNFRSF8" FT /locus_tag="RP11-426M1.1-002" FT /product="tumor necrosis factor receptor superfamily, FT member 8" FT /note="match: cDNAs: Em:D86042.1" FT polyA_signal 12204241..12204246 FT polyA_site 12204264 FT mRNA join(12227060..12227226,12248853..12248952, FT 12251014..12251142,12251831..12251980,12252488..12252581, FT 12252920..12253155,12254012..12254089,12254641..12254675, FT complement(AL031276.1:109444..109648), FT complement(AL031276.1:102387..104875)) FT /gene="TNFRSF1B" FT /locus_tag="RP5-1118D24.1-001" FT /product="tumor necrosis factor receptor superfamily, FT member 1B" FT /note="match: cDNAs: Em:BC052977.1 Em:M32315.1 Em:M35857.1 FT Em:M55994.1 Em:S63368.1" FT /note="match: ESTs: Em:AI309205.1 Em:AW505301.1 FT Em:BF568708.1 Em:BI822108.1 Em:BM993941.1 Em:BQ003023.1 FT Em:BU733160.1 Em:BX327944.1 Em:BX327945.1 Em:BX359982.1 FT Em:CA442229.1 Em:CB989913.1 Em:CD109376.1 Em:CD369246.1" FT mRNA join(12227060..12227226,12251014..12251142, FT 12251831..12251980,12252488..12252581,12252920..12253155, FT 12254012..12254089,12254641..12254675, FT complement(AL031276.1:109444..109648), FT complement(AL031276.1:102387..104875)) FT /gene="TNFRSF1B" FT /locus_tag="RP5-1118D24.1-002" FT /product="tumor necrosis factor receptor superfamily, FT member 1B" FT /note="match: cDNAs: Em:BC011844.2 Em:BC042167.1" FT /note="match: ESTs: Em:BF204631.1 Em:BG828205.1 FT Em:BI115162.1" FT CDS join(12227149..12227226,12248853..12248952, FT 12251014..12251142,12251831..12251980,12252488..12252581, FT 12252920..12253155,12254012..12254089,12254641..12254675, FT complement(AL031276.1:109444..109648), FT complement(AL031276.1:104595..104875)) FT /gene="TNFRSF1B" FT /locus_tag="RP5-1118D24.1-001" FT /standard_name="OTTHUMP00000001784" FT /product="tumor necrosis factor receptor superfamily, FT member 1B" FT /note="match: proteins: Sw:P20333 Tr:P20333" FT /protein_id="CAH73721.1" FT /translation="MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREY FT YDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQ FT VETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKP FT CAPGTFSNTTSSTDICRPHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVST FT RSQHTQPTPEPSTAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNC FT VIMTQVKKKPLCLQREAKVPHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDR FT RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSS FT QASSTMGDTDSSPSESPKDEQVPFSKEECAFRSQLETPETLLGSTEEKPLPLGVPDAGM FT KPS" FT mRNA join(12251895..12251980,12252405..12252581, FT 12252920..12253065) FT /gene="TNFRSF1B" FT /locus_tag="RP5-1118D24.1-003" FT /product="tumor necrosis factor receptor superfamily, FT member 1B" FT /note="match: ESTs: Em:BF764027.1" FT misc_feature 12254070 FT /note="Clone_left_end: RP5-1118D24" FT misc_feature complement(12258070..12371671) FT /note="annotated region of clone" FT mRNA join(12371583..12371671,BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..26015) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-004" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK001481.1" FT CDS join(<12364625..12364785,12368488..12368698, FT 12371511..12371671,BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..87747) FT /codon_start=2 FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /standard_name="OTTHUMP00000015346" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /protein_id="CAI19222.1" FT /translation="TEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTLS FT VGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTG FT GSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLG FT EPIEEFMRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLARFDF FT KKCKLLYESFSNQTKSINLVSHSMMAFDTRYAGQKTSPGMTNVFSCIFQPAKNSSTTQG FT SIQIELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDIKKQNHVTPSRHRN FT SSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSCFDTNAIILK FT GTTVLTYKPRFVDRPFSGSLFGIEVFSCRLGNEHDTALSIVDPVQIQMELVGNSSYQNS FT SGLMDAFNSEDFPPVLEIQLQALDIRLSYNDVQLFLAIAKSIPEQANAAVPDSVALESD FT SVGTYLPGASRVGEEIREGTRHTLDPVLELQLARLQELGFSMDDCRKALLACQGQLKKA FT ASWLFKNAEPLKSLSLASTSRDSPGAVAAPLISGVEIKAESVCICFIDDCMDCDVPLAE FT LTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFIEPWPCSVSWQQQAASRLHP FT PRLKLEAKAKPRLDINITSVLIDQYVSTKESWMADYCKDDKDIESAKSEDWMGSSVDPP FT CFGQTEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTF FT LDDTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDK FT VGTFFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITV FT RSALIVRNRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGV FT FFCKAPIHWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDS FT AKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIE FT LGVSLENFPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPY FT WLINKTGLPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIH FT PEGMPGWCQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPR FT YLLDNKSSHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDV FT PNCIWSGGFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRID FT NFSKVPVVFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMN FT DFQDNRQLYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKK FT KEPGKRSQLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEP FT LMLRKPDRRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLG FT PVPPEQQFINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQEL FT QKLKNPDTEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSI FT QDVQVDNQLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMIT FT AQRFTVQIEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISI FT PQIKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILK FT HFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAA FT KFAGTLSDGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTV FT EGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVR FT KPRCCTGPQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFL FT KSGDYVDREAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMV FT HVKSEVLAVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(<12364625..12364785,12368488..12368698, FT 12371511..12371671,BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BX641035.1" FT /note="match: ESTs: Em:BG714328.1 Em:BQ005959.1 FT Em:BX282193.1 Em:CB044598.1 Em:R10290.1" FT mRNA join(12359338..12359441,12364563..12364785, FT 12368488..12368698,12371511..12371671, FT BX784395.1:2001..2011,BX784395.1:2199..2311, FT BX682532.4:2142..2354,BX682532.4:6099..6364, FT BX682532.4:7524..7657,BX682532.4:9836..9991, FT BX682532.4:10563..10773,BX682532.4:11733..11807, FT BX682532.4:15675..15881,BX682532.4:17856..17945, FT BX682532.4:21253..21393,BX682532.4:23732..23854, FT BX682532.4:29807..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5318) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-002" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK125118.1" FT mRNA join(12313791..12313883,12316333..12316560, FT 12317044..12317144,12317992..12318012) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-008" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: ESTs: Em:BQ380551.1" FT mRNA join(12304481..12304493,12304594..12304674, FT 12309280..12309660) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-007" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: ESTs: Em:BG005909.1" FT CDS join(12294324..12294420,12302570..12302647, FT 12304303..12304493,12304594..12304674,12309280..12309396, FT 12313779..12313883,12316390..12316560,12317044..12317144, FT 12317992..12318160,12320750..12320851,12321005..12321206, FT 12321958..12322137,12326938..12327068,12327902..12327977, FT 12328763..12328933,12331051..12331181,12333060..12333192, FT 12335882..12338095,12339556..12339707,12342762..12343793, FT 12348280..12348370,12351055..12351181,12353581..12353761, FT 12359259..12359441,12364563..12364785,12368488..12368698, FT 12371511..12371671,BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..87747) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /standard_name="OTTHUMP00000015345" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q86UB4 Tr:Q9NSJ3 Tr:Q9UIM0" FT /protein_id="CAI19223.1" FT /translation="MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKD FT ALKELELPFEVKAGFIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQDFNDEKEKL FT LERERKKALLQALEEKWKNDRQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGV FT TNPSHPFAFGICIKNVSMQNAVNEPVQKLMRKKQLDVAEFSIYWDVDCTLLGDLPQMEL FT QEAMARSMESRSHHYVLEPVFASALLKRNCSKKPLRSRHSPRIDCDIQLETIPLKLSQL FT QYRQIMEFLKELERKERQVKFRRWKPKVAISKNCREWWYFALNANLYEIREQRKRCTWD FT FMLHRARDAVSYTDKYFNKLKGGLLSTDDKEEMCRIEEEQSFEELKILRELVHDRFHKQ FT EELAESLREPQFDSPGACPGAPEPGGGSGMLQYLQSWFPGWGGWYGQQTPEGNVVEGLS FT AEQQEQWIPEEILGTEEFFDPTADASCMNTYTKRDHVFAKLNLQLQRGTVTLLHKEQGT FT PQMNESAFMQLEFSDVKLLAESLPRRNSSLLSVRLGGLFLRDLATEGTMFPLLVFPNPQ FT KEVGRVSQSFGLQTTSADRSDHYPAADPDGPVFEMLYERNPAHSHFERRLNVSTRPLNI FT IYNPQAIKKVADFFYKGKVHTSGFGYQSELELRVAEAARRQYNKLKMQTKAEIRQTLDR FT LLVGDFIEESKRWTVRLDISAPQVIFPDDFKFKNPVLVVVDLGRMLLTNTQDNSRRKSR FT DGSASEETQFSDDEYKTPLATPPNTPPPESSSSNGEKTPPFSGVEFSEEQLQAHLMSTK FT MYERYSLSFMDLQIMVGRVKDNWKHVQDIDVGPTHVVEKFNVHLQLERRLIYTSDPKYP FT GAVLSGNLPDLKIHINEDKISALKNCFALLTTPEMKTSDTQIKEKIFPQEEQRGSLQDS FT VMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVK FT RPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPN FT VAHLTDGATLNDRSATSVSLDKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQV FT NNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTYEQNTEV FT AVEIHRLNLLLLRTVGMANREKYGRKIATASIGGTKVNVSMGSTFDMNGSLGCLQLMDL FT TQDNVKNQYVVSIGNSVGYENIISDIGYFESVFVRMEDAALTEALSFTFVERSKQECFL FT NLKMASLHYNHSAKFLKELTLSMDELEENFRGMLKSAATKVTTVLATKTAEYSEMVSLF FT ETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHL FT GQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAGREAVGSEGSRMFCPPSGSGS FT ANSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIERESELTFSLSPDDLGTS FT SIMKIEGKFVNPVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLS FT TCGESSVERKENGLFSHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLSGDLTLG FT AQGLVSLKFQDFEVEFSKDHPQTLSIQIALHSLLMEDLLEKNPDSKYKNLMVSRGAPKP FT SSLAQKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPTSASRKKQKEVQDK FT DYPLTPPPSPTVDEPKILVGKSKFDDSLVHINIFLVDKKHPEFSSSYNRVNRSIDVDFN FT CLDVLITLQTWVVILDFFGIGSTADNHAMRLPPEGILHNVKLEPHASMESGLQDPVNTK FT LDLKVHSLSLVLNKTTSELAKANVSKLVAHLEMIEGDLALQGSIGSLSLSDLTCHGEFY FT RERFTTSGEEALIFQTFKYGRPDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQH FT FTQLQDVLGRQRAAIEGQTVRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGK FT LKVKNKFLFAGFPGTFSLQDKESVPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPL FT AGMSLGSLKSEFVPSTSTKQQGPQPTLSVGQESSSPEDHVCLLDCVVVDLQDMDIFAAE FT RHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISI FT HGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTCMCF FT LIDMVNVSLELKDPKRKEGAGSLARFDFKKCKLLYESFSNQTKSINLVSHSMMAFDTRY FT AGQKTSPGMTNVFSCIFQPAKNSSTTQGSIQIELHFRSTKDSSCFTVVLNNLRVFLIFD FT WLLLVHDFLHTPSDIKKQNHVTPSRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHL FT EVKVNVTGTEFVVIEDVSCFDTNAIILKGTTVLTYKPRFVDRPFSGSLFGIEVFSCRLG FT NEHDTALSIVDPVQIQMELVGNSSYQNSSGLMDAFNSEDFPPVLEIQLQALDIRLSYND FT VQLFLAIAKSIPEQANAAVPDSVALESDSVGTYLPGASRVGEEIREGTRHTLDPVLELQ FT LARLQELGFSMDDCRKALLACQGQLKKAASWLFKNAEPLKSLSLASTSRDSPGAVAAPL FT ISGVEIKAESVCICFIDDCMDCDVPLAELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNR FT ALSGWEPFIEPWPCSVSWQQQAASRLHPPRLKLEAKAKPRLDINITSVLIDQYVSTKES FT WMADYCKDDKDIESAKSEDWMGSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYAREV FT KTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNV FT SEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDKVGTFFRY FT AAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR FT NRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGVFFCKAPI FT HWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDSAKQIFRQ FT PGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIELGVSLEN FT FPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPYWLINKTG FT LPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIHPEGMPGW FT CQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKS FT SHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSG FT GFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPV FT VFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMNDFQDNRQ FT LYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKKKEPGKRS FT QLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEPLMLRKPD FT RRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQ FT FINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQELQKLKNPD FT TEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDN FT QLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMITAQRFTVQ FT IEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSV FT FTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELL FT SQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLS FT DGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEG FT GVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVRKPRCCTG FT PQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFLKSGDYVD FT REAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMVHVKSEVL FT AVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(12290124..12290177,12294248..12294420, FT 12302570..12302647,12304303..12304493,12304594..12304674, FT 12309280..12309396,12313779..12313883,12316390..12316560, FT 12317044..12317144,12317992..12318160,12320750..12320851, FT 12321005..12321206,12321958..12322137,12326938..12327068, FT 12327902..12327977,12328763..12328933,12331051..12331181, FT 12333060..12333192,12335882..12338095,12339556..12339707, FT 12342762..12343793,12348280..12348370,12351055..12351181, FT 12353581..12353761,12359259..12359441,12364563..12364785, FT 12368488..12368698,12371511..12371671, FT BX784395.1:2001..2011,BX784395.1:2199..2311, FT BX682532.4:2142..2354,BX682532.4:6099..6364, FT BX682532.4:7524..7657,BX682532.4:9836..9991, FT BX682532.4:10563..10773,BX682532.4:11733..11807, FT BX682532.4:15675..15881,BX682532.4:17856..17945, FT BX682532.4:21253..21393,BX682532.4:23732..23854, FT BX682532.4:26258..26332,BX682532.4:29810..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AB007922.3 Em:AK057675.1 FT Em:AK074350.1 Em:AL162331.1 Em:AL833079.1 Em:BC028115.1 FT Em:BC051804.1" FT /note="match: ESTs: Em:AI077324.1 Em:AI275077.1 FT Em:AI359540.1 Em:AI825257.1 Em:AL118592.1 Em:AL598064.1 FT Em:AL703898.1 Em:AU129407.1 Em:AW864675.1 Em:BF334941.1 FT Em:BF365579.1 Em:BF377336.1 Em:BF885418.1 Em:BF911498.1 FT Em:BG994160.1 Em:BI061932.1 Em:BI063205.1 Em:BM719840.1 FT Em:BX488817.1 Em:CA310426.1 Em:CA394072.1 Em:CA434794.1 FT Em:CB045261.1 Em:CB321851.1 Em:CD364663.1 Em:CD655090.1" FT CDS complement(12280849..12281166) FT /pseudo FT /locus_tag="RP5-1118D24.2-001" FT /product="ribosomal protein L10 (RPL10) pseudogene" FT /note="match: proteins: Sw:P27635 Sw:Q6PDV7 Sw:Q6ZWV3 FT Sw:Q9XSI3" FT polyA_site 12269285 FT polyA_signal 12269259..12269264 FT mRNA join(AL357835.11:120489..120655,AL357835.11:142282..142381, FT AL357835.11:144443..144571,AL357835.11:145260..145409, FT AL357835.11:145917..146010,AL357835.11:146349..146584, FT AL357835.11:147441..147518,AL357835.11:148070..148104, FT 12262024..12262228,12266797..12269285) FT /gene="TNFRSF1B" FT /locus_tag="RP5-1118D24.1-001" FT /product="tumor necrosis factor receptor superfamily, FT member 1B" FT /note="match: cDNAs: Em:BC052977.1 Em:M32315.1 Em:M35857.1 FT Em:M55994.1 Em:S63368.1" FT /note="match: ESTs: Em:AI309205.1 Em:AW505301.1 FT Em:BF568708.1 Em:BI822108.1 Em:BM993941.1 Em:BQ003023.1 FT Em:BU733160.1 Em:BX327944.1 Em:BX327945.1 Em:BX359982.1 FT Em:CA442229.1 Em:CB989913.1 Em:CD109376.1 Em:CD369246.1" FT mRNA join(AL357835.11:120489..120655,AL357835.11:144443..144571, FT AL357835.11:145260..145409,AL357835.11:145917..146010, FT AL357835.11:146349..146584,AL357835.11:147441..147518, FT AL357835.11:148070..148104,12262024..12262228, FT 12266797..12269285) FT /gene="TNFRSF1B" FT /locus_tag="RP5-1118D24.1-002" FT /product="tumor necrosis factor receptor superfamily, FT member 1B" FT /note="match: cDNAs: Em:BC011844.2 Em:BC042167.1" FT /note="match: ESTs: Em:BF204631.1 Em:BG828205.1 FT Em:BI115162.1" FT CDS join(AL357835.11:120578..120655,AL357835.11:142282..142381, FT AL357835.11:144443..144571,AL357835.11:145260..145409, FT AL357835.11:145917..146010,AL357835.11:146349..146584, FT AL357835.11:147441..147518,AL357835.11:148070..148104, FT 12262024..12262228,12266797..12267077) FT /gene="TNFRSF1B" FT /locus_tag="RP5-1118D24.1-001" FT /standard_name="OTTHUMP00000001784" FT /product="tumor necrosis factor receptor superfamily, FT member 1B" FT /note="match: proteins: Sw:P20333 Tr:P20333" FT /protein_id="CAI19225.1" FT /translation="MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREY FT YDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQ FT VETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKP FT CAPGTFSNTTSSTDICRPHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVST FT RSQHTQPTPEPSTAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNC FT VIMTQVKKKPLCLQREAKVPHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDR FT RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSS FT QASSTMGDTDSSPSESPKDEQVPFSKEECAFRSQLETPETLLGSTEEKPLPLGVPDAGM FT KPS" FT misc_feature 12371672..12374030 FT /note="annotated region of clone" FT mRNA join(complement(AL031276.1:1..89),12371672..12371682, FT 12371870..12371982,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..26015) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-004" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK001481.1" FT CDS join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),12371672..12371682, FT 12371870..12371982,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..87747) FT /codon_start=2 FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /standard_name="OTTHUMP00000015346" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /protein_id="CAI19411.1" FT /translation="TEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTLS FT VGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTG FT GSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLG FT EPIEEFMRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLARFDF FT KKCKLLYESFSNQTKSINLVSHSMMAFDTRYAGQKTSPGMTNVFSCIFQPAKNSSTTQG FT SIQIELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDIKKQNHVTPSRHRN FT SSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSCFDTNAIILK FT GTTVLTYKPRFVDRPFSGSLFGIEVFSCRLGNEHDTALSIVDPVQIQMELVGNSSYQNS FT SGLMDAFNSEDFPPVLEIQLQALDIRLSYNDVQLFLAIAKSIPEQANAAVPDSVALESD FT SVGTYLPGASRVGEEIREGTRHTLDPVLELQLARLQELGFSMDDCRKALLACQGQLKKA FT ASWLFKNAEPLKSLSLASTSRDSPGAVAAPLISGVEIKAESVCICFIDDCMDCDVPLAE FT LTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFIEPWPCSVSWQQQAASRLHP FT PRLKLEAKAKPRLDINITSVLIDQYVSTKESWMADYCKDDKDIESAKSEDWMGSSVDPP FT CFGQTEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTF FT LDDTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDK FT VGTFFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITV FT RSALIVRNRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGV FT FFCKAPIHWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDS FT AKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIE FT LGVSLENFPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPY FT WLINKTGLPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIH FT PEGMPGWCQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPR FT YLLDNKSSHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDV FT PNCIWSGGFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRID FT NFSKVPVVFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMN FT DFQDNRQLYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKK FT KEPGKRSQLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEP FT LMLRKPDRRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLG FT PVPPEQQFINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQEL FT QKLKNPDTEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSI FT QDVQVDNQLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMIT FT AQRFTVQIEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISI FT PQIKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILK FT HFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAA FT KFAGTLSDGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTV FT EGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVR FT KPRCCTGPQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFL FT KSGDYVDREAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMV FT HVKSEVLAVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),12371672..12371682, FT 12371870..12371982,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BX641035.1" FT /note="match: ESTs: Em:BG714328.1 Em:BQ005959.1 FT Em:BX282193.1 Em:CB044598.1 Em:R10290.1" FT mRNA join(complement(AL031276.1:12231..12334), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),12371672..12371682, FT 12371870..12371982,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5318) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-002" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK125118.1" FT CDS join(complement(AL031276.1:77252..77348), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),12371672..12371682, FT 12371870..12371982,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..87747) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /standard_name="OTTHUMP00000015345" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q86UB4 Tr:Q9NSJ3 Tr:Q9UIM0" FT /protein_id="CAI19412.1" FT /translation="MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKD FT ALKELELPFEVKAGFIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQDFNDEKEKL FT LERERKKALLQALEEKWKNDRQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGV FT TNPSHPFAFGICIKNVSMQNAVNEPVQKLMRKKQLDVAEFSIYWDVDCTLLGDLPQMEL FT QEAMARSMESRSHHYVLEPVFASALLKRNCSKKPLRSRHSPRIDCDIQLETIPLKLSQL FT QYRQIMEFLKELERKERQVKFRRWKPKVAISKNCREWWYFALNANLYEIREQRKRCTWD FT FMLHRARDAVSYTDKYFNKLKGGLLSTDDKEEMCRIEEEQSFEELKILRELVHDRFHKQ FT EELAESLREPQFDSPGACPGAPEPGGGSGMLQYLQSWFPGWGGWYGQQTPEGNVVEGLS FT AEQQEQWIPEEILGTEEFFDPTADASCMNTYTKRDHVFAKLNLQLQRGTVTLLHKEQGT FT PQMNESAFMQLEFSDVKLLAESLPRRNSSLLSVRLGGLFLRDLATEGTMFPLLVFPNPQ FT KEVGRVSQSFGLQTTSADRSDHYPAADPDGPVFEMLYERNPAHSHFERRLNVSTRPLNI FT IYNPQAIKKVADFFYKGKVHTSGFGYQSELELRVAEAARRQYNKLKMQTKAEIRQTLDR FT LLVGDFIEESKRWTVRLDISAPQVIFPDDFKFKNPVLVVVDLGRMLLTNTQDNSRRKSR FT DGSASEETQFSDDEYKTPLATPPNTPPPESSSSNGEKTPPFSGVEFSEEQLQAHLMSTK FT MYERYSLSFMDLQIMVGRVKDNWKHVQDIDVGPTHVVEKFNVHLQLERRLIYTSDPKYP FT GAVLSGNLPDLKIHINEDKISALKNCFALLTTPEMKTSDTQIKEKIFPQEEQRGSLQDS FT VMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVK FT RPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPN FT VAHLTDGATLNDRSATSVSLDKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQV FT NNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTYEQNTEV FT AVEIHRLNLLLLRTVGMANREKYGRKIATASIGGTKVNVSMGSTFDMNGSLGCLQLMDL FT TQDNVKNQYVVSIGNSVGYENIISDIGYFESVFVRMEDAALTEALSFTFVERSKQECFL FT NLKMASLHYNHSAKFLKELTLSMDELEENFRGMLKSAATKVTTVLATKTAEYSEMVSLF FT ETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHL FT GQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAGREAVGSEGSRMFCPPSGSGS FT ANSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIERESELTFSLSPDDLGTS FT SIMKIEGKFVNPVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLS FT TCGESSVERKENGLFSHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLSGDLTLG FT AQGLVSLKFQDFEVEFSKDHPQTLSIQIALHSLLMEDLLEKNPDSKYKNLMVSRGAPKP FT SSLAQKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPTSASRKKQKEVQDK FT DYPLTPPPSPTVDEPKILVGKSKFDDSLVHINIFLVDKKHPEFSSSYNRVNRSIDVDFN FT CLDVLITLQTWVVILDFFGIGSTADNHAMRLPPEGILHNVKLEPHASMESGLQDPVNTK FT LDLKVHSLSLVLNKTTSELAKANVSKLVAHLEMIEGDLALQGSIGSLSLSDLTCHGEFY FT RERFTTSGEEALIFQTFKYGRPDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQH FT FTQLQDVLGRQRAAIEGQTVRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGK FT LKVKNKFLFAGFPGTFSLQDKESVPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPL FT AGMSLGSLKSEFVPSTSTKQQGPQPTLSVGQESSSPEDHVCLLDCVVVDLQDMDIFAAE FT RHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISI FT HGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTCMCF FT LIDMVNVSLELKDPKRKEGAGSLARFDFKKCKLLYESFSNQTKSINLVSHSMMAFDTRY FT AGQKTSPGMTNVFSCIFQPAKNSSTTQGSIQIELHFRSTKDSSCFTVVLNNLRVFLIFD FT WLLLVHDFLHTPSDIKKQNHVTPSRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHL FT EVKVNVTGTEFVVIEDVSCFDTNAIILKGTTVLTYKPRFVDRPFSGSLFGIEVFSCRLG FT NEHDTALSIVDPVQIQMELVGNSSYQNSSGLMDAFNSEDFPPVLEIQLQALDIRLSYND FT VQLFLAIAKSIPEQANAAVPDSVALESDSVGTYLPGASRVGEEIREGTRHTLDPVLELQ FT LARLQELGFSMDDCRKALLACQGQLKKAASWLFKNAEPLKSLSLASTSRDSPGAVAAPL FT ISGVEIKAESVCICFIDDCMDCDVPLAELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNR FT ALSGWEPFIEPWPCSVSWQQQAASRLHPPRLKLEAKAKPRLDINITSVLIDQYVSTKES FT WMADYCKDDKDIESAKSEDWMGSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYAREV FT KTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNV FT SEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDKVGTFFRY FT AAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR FT NRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGVFFCKAPI FT HWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDSAKQIFRQ FT PGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIELGVSLEN FT FPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPYWLINKTG FT LPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIHPEGMPGW FT CQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKS FT SHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSG FT GFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPV FT VFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMNDFQDNRQ FT LYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKKKEPGKRS FT QLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEPLMLRKPD FT RRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQ FT FINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQELQKLKNPD FT TEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDN FT QLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMITAQRFTVQ FT IEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSV FT FTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELL FT SQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLS FT DGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEG FT GVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVRKPRCCTG FT PQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFLKSGDYVD FT REAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMVHVKSEVL FT AVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:81495..81548), FT complement(AL031276.1:77252..77424), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),12371672..12371682, FT 12371870..12371982,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AB007922.3 Em:AK057675.1 FT Em:AK074350.1 Em:AL162331.1 Em:AL833079.1 Em:BC028115.1 FT Em:BC051804.1" FT /note="match: ESTs: Em:AI077324.1 Em:AI275077.1 FT Em:AI359540.1 Em:AI825257.1 Em:AL118592.1 Em:AL598064.1 FT Em:AL703898.1 Em:AU129407.1 Em:AW864675.1 Em:BF334941.1 FT Em:BF365579.1 Em:BF377336.1 Em:BF885418.1 Em:BF911498.1 FT Em:BG994160.1 Em:BI061932.1 Em:BI063205.1 Em:BM719840.1 FT Em:BX488817.1 Em:CA310426.1 Em:CA394072.1 Em:CA434794.1 FT Em:CB045261.1 Em:CB321851.1 Em:CD364663.1 Em:CD655090.1" FT misc_feature 12374031..12413851 FT /note="annotated region of clone" FT mRNA join(complement(AL031276.1:1..89),BX784395.1:2001..2011, FT BX784395.1:2199..2311,12374172..12374384, FT 12378129..12378394,12379554..12379687,12381866..12382021, FT 12382593..12382803,12383763..12383837,12387705..12387911, FT 12389886..12389975,12393283..12393423,12395762..12398045) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-004" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK001481.1" FT CDS join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,12374172..12374384, FT 12378129..12378394,12379554..12379687,12381866..12382021, FT 12382593..12382803,12383763..12383837,12387705..12387911, FT 12389886..12389975,12393283..12393423,12395762..12395884, FT 12401837..12401942,12402956..12403108,12405431..12405566, FT 12406662..12406709,12408880..12409030,12409221..12409431, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..87747) FT /codon_start=2 FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /standard_name="OTTHUMP00000015346" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /protein_id="CAI23590.1" FT /translation="TEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTLS FT VGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTG FT GSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLG FT EPIEEFMRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLARFDF FT KKCKLLYESFSNQTKSINLVSHSMMAFDTRYAGQKTSPGMTNVFSCIFQPAKNSSTTQG FT SIQIELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDIKKQNHVTPSRHRN FT SSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSCFDTNAIILK FT GTTVLTYKPRFVDRPFSGSLFGIEVFSCRLGNEHDTALSIVDPVQIQMELVGNSSYQNS FT SGLMDAFNSEDFPPVLEIQLQALDIRLSYNDVQLFLAIAKSIPEQANAAVPDSVALESD FT SVGTYLPGASRVGEEIREGTRHTLDPVLELQLARLQELGFSMDDCRKALLACQGQLKKA FT ASWLFKNAEPLKSLSLASTSRDSPGAVAAPLISGVEIKAESVCICFIDDCMDCDVPLAE FT LTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFIEPWPCSVSWQQQAASRLHP FT PRLKLEAKAKPRLDINITSVLIDQYVSTKESWMADYCKDDKDIESAKSEDWMGSSVDPP FT CFGQTEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTF FT LDDTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDK FT VGTFFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITV FT RSALIVRNRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGV FT FFCKAPIHWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDS FT AKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIE FT LGVSLENFPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPY FT WLINKTGLPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIH FT PEGMPGWCQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPR FT YLLDNKSSHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDV FT PNCIWSGGFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRID FT NFSKVPVVFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMN FT DFQDNRQLYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKK FT KEPGKRSQLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEP FT LMLRKPDRRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLG FT PVPPEQQFINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQEL FT QKLKNPDTEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSI FT QDVQVDNQLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMIT FT AQRFTVQIEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISI FT PQIKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILK FT HFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAA FT KFAGTLSDGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTV FT EGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVR FT KPRCCTGPQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFL FT KSGDYVDREAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMV FT HVKSEVLAVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,12374172..12374384, FT 12378129..12378394,12379554..12379687,12381866..12382021, FT 12382593..12382803,12383763..12383837,12387705..12387911, FT 12389886..12389975,12393283..12393423,12395762..12395884, FT 12401837..12401942,12402956..12403108,12405431..12405566, FT 12406662..12406709,12408880..12409030,12409221..12409431, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BX641035.1" FT /note="match: ESTs: Em:BG714328.1 Em:BQ005959.1 FT Em:BX282193.1 Em:CB044598.1 Em:R10290.1" FT mRNA join(complement(AL031276.1:12231..12334), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,12374172..12374384, FT 12378129..12378394,12379554..12379687,12381866..12382021, FT 12382593..12382803,12383763..12383837,12387705..12387911, FT 12389886..12389975,12393283..12393423,12395762..12395884, FT 12401837..12401942,12402956..12403108,12405431..12405566, FT 12406662..12406709,12408880..12409431,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5318) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-002" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK125118.1" FT mRNA join(12404922..12405067,12405431..12405566, FT 12406662..12406709,12408880..12409030,12409221..12409306) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-009" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: ESTs: Em:CD704457.1" FT misc_feature 12411851 FT /note="Clone_right_end: WI2-801539E12" FT CDS join(complement(AL031276.1:77252..77348), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,12374172..12374384, FT 12378129..12378394,12379554..12379687,12381866..12382021, FT 12382593..12382803,12383763..12383837,12387705..12387911, FT 12389886..12389975,12393283..12393423,12395762..12395884, FT 12398288..12398362,12401840..12401942,12402956..12403108, FT 12405431..12405566,12406662..12406709,12408880..12409030, FT 12409221..12409431,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..87747) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /standard_name="OTTHUMP00000015345" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q86UB4 Tr:Q9NSJ3 Tr:Q9UIM0" FT /protein_id="CAI23591.1" FT /translation="MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKD FT ALKELELPFEVKAGFIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQDFNDEKEKL FT LERERKKALLQALEEKWKNDRQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGV FT TNPSHPFAFGICIKNVSMQNAVNEPVQKLMRKKQLDVAEFSIYWDVDCTLLGDLPQMEL FT QEAMARSMESRSHHYVLEPVFASALLKRNCSKKPLRSRHSPRIDCDIQLETIPLKLSQL FT QYRQIMEFLKELERKERQVKFRRWKPKVAISKNCREWWYFALNANLYEIREQRKRCTWD FT FMLHRARDAVSYTDKYFNKLKGGLLSTDDKEEMCRIEEEQSFEELKILRELVHDRFHKQ FT EELAESLREPQFDSPGACPGAPEPGGGSGMLQYLQSWFPGWGGWYGQQTPEGNVVEGLS FT AEQQEQWIPEEILGTEEFFDPTADASCMNTYTKRDHVFAKLNLQLQRGTVTLLHKEQGT FT PQMNESAFMQLEFSDVKLLAESLPRRNSSLLSVRLGGLFLRDLATEGTMFPLLVFPNPQ FT KEVGRVSQSFGLQTTSADRSDHYPAADPDGPVFEMLYERNPAHSHFERRLNVSTRPLNI FT IYNPQAIKKVADFFYKGKVHTSGFGYQSELELRVAEAARRQYNKLKMQTKAEIRQTLDR FT LLVGDFIEESKRWTVRLDISAPQVIFPDDFKFKNPVLVVVDLGRMLLTNTQDNSRRKSR FT DGSASEETQFSDDEYKTPLATPPNTPPPESSSSNGEKTPPFSGVEFSEEQLQAHLMSTK FT MYERYSLSFMDLQIMVGRVKDNWKHVQDIDVGPTHVVEKFNVHLQLERRLIYTSDPKYP FT GAVLSGNLPDLKIHINEDKISALKNCFALLTTPEMKTSDTQIKEKIFPQEEQRGSLQDS FT VMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVK FT RPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPN FT VAHLTDGATLNDRSATSVSLDKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQV FT NNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTYEQNTEV FT AVEIHRLNLLLLRTVGMANREKYGRKIATASIGGTKVNVSMGSTFDMNGSLGCLQLMDL FT TQDNVKNQYVVSIGNSVGYENIISDIGYFESVFVRMEDAALTEALSFTFVERSKQECFL FT NLKMASLHYNHSAKFLKELTLSMDELEENFRGMLKSAATKVTTVLATKTAEYSEMVSLF FT ETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHL FT GQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAGREAVGSEGSRMFCPPSGSGS FT ANSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIERESELTFSLSPDDLGTS FT SIMKIEGKFVNPVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLS FT TCGESSVERKENGLFSHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLSGDLTLG FT AQGLVSLKFQDFEVEFSKDHPQTLSIQIALHSLLMEDLLEKNPDSKYKNLMVSRGAPKP FT SSLAQKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPTSASRKKQKEVQDK FT DYPLTPPPSPTVDEPKILVGKSKFDDSLVHINIFLVDKKHPEFSSSYNRVNRSIDVDFN FT CLDVLITLQTWVVILDFFGIGSTADNHAMRLPPEGILHNVKLEPHASMESGLQDPVNTK FT LDLKVHSLSLVLNKTTSELAKANVSKLVAHLEMIEGDLALQGSIGSLSLSDLTCHGEFY FT RERFTTSGEEALIFQTFKYGRPDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQH FT FTQLQDVLGRQRAAIEGQTVRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGK FT LKVKNKFLFAGFPGTFSLQDKESVPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPL FT AGMSLGSLKSEFVPSTSTKQQGPQPTLSVGQESSSPEDHVCLLDCVVVDLQDMDIFAAE FT RHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISI FT HGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTCMCF FT LIDMVNVSLELKDPKRKEGAGSLARFDFKKCKLLYESFSNQTKSINLVSHSMMAFDTRY FT AGQKTSPGMTNVFSCIFQPAKNSSTTQGSIQIELHFRSTKDSSCFTVVLNNLRVFLIFD FT WLLLVHDFLHTPSDIKKQNHVTPSRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHL FT EVKVNVTGTEFVVIEDVSCFDTNAIILKGTTVLTYKPRFVDRPFSGSLFGIEVFSCRLG FT NEHDTALSIVDPVQIQMELVGNSSYQNSSGLMDAFNSEDFPPVLEIQLQALDIRLSYND FT VQLFLAIAKSIPEQANAAVPDSVALESDSVGTYLPGASRVGEEIREGTRHTLDPVLELQ FT LARLQELGFSMDDCRKALLACQGQLKKAASWLFKNAEPLKSLSLASTSRDSPGAVAAPL FT ISGVEIKAESVCICFIDDCMDCDVPLAELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNR FT ALSGWEPFIEPWPCSVSWQQQAASRLHPPRLKLEAKAKPRLDINITSVLIDQYVSTKES FT WMADYCKDDKDIESAKSEDWMGSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYAREV FT KTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNV FT SEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDKVGTFFRY FT AAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR FT NRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGVFFCKAPI FT HWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDSAKQIFRQ FT PGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIELGVSLEN FT FPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPYWLINKTG FT LPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIHPEGMPGW FT CQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKS FT SHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSG FT GFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPV FT VFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMNDFQDNRQ FT LYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKKKEPGKRS FT QLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEPLMLRKPD FT RRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQ FT FINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQELQKLKNPD FT TEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDN FT QLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMITAQRFTVQ FT IEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSV FT FTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELL FT SQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLS FT DGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEG FT GVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVRKPRCCTG FT PQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFLKSGDYVD FT REAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMVHVKSEVL FT AVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:81495..81548), FT complement(AL031276.1:77252..77424), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,12374172..12374384, FT 12378129..12378394,12379554..12379687,12381866..12382021, FT 12382593..12382803,12383763..12383837,12387705..12387911, FT 12389886..12389975,12393283..12393423,12395762..12395884, FT 12398288..12398362,12401840..12401942,12402956..12403108, FT 12405431..12405566,12406662..12406709,12408880..12409030, FT 12409221..12409431,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AB007922.3 Em:AK057675.1 FT Em:AK074350.1 Em:AL162331.1 Em:AL833079.1 Em:BC028115.1 FT Em:BC051804.1" FT /note="match: ESTs: Em:AI077324.1 Em:AI275077.1 FT Em:AI359540.1 Em:AI825257.1 Em:AL118592.1 Em:AL598064.1 FT Em:AL703898.1 Em:AU129407.1 Em:AW864675.1 Em:BF334941.1 FT Em:BF365579.1 Em:BF377336.1 Em:BF885418.1 Em:BF911498.1 FT Em:BG994160.1 Em:BI061932.1 Em:BI063205.1 Em:BM719840.1 FT Em:BX488817.1 Em:CA310426.1 Em:CA394072.1 Em:CA434794.1 FT Em:CB045261.1 Em:CB321851.1 Em:CD364663.1 Em:CD655090.1" FT misc_feature 12413852..12430585 FT /note="annotated region of clone" FT CDS join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,12414031..12414278, FT 12415956..12416147,12416455..12416581,12418515..12418657, FT 12422776..12422906,12423128..12423303,12428523..12428646, FT 12429522..12429757,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..87747) FT /codon_start=2 FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /standard_name="OTTHUMP00000015346" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /protein_id="CAI19413.1" FT /translation="TEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTLS FT VGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTG FT GSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLG FT EPIEEFMRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLARFDF FT KKCKLLYESFSNQTKSINLVSHSMMAFDTRYAGQKTSPGMTNVFSCIFQPAKNSSTTQG FT SIQIELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDIKKQNHVTPSRHRN FT SSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSCFDTNAIILK FT GTTVLTYKPRFVDRPFSGSLFGIEVFSCRLGNEHDTALSIVDPVQIQMELVGNSSYQNS FT SGLMDAFNSEDFPPVLEIQLQALDIRLSYNDVQLFLAIAKSIPEQANAAVPDSVALESD FT SVGTYLPGASRVGEEIREGTRHTLDPVLELQLARLQELGFSMDDCRKALLACQGQLKKA FT ASWLFKNAEPLKSLSLASTSRDSPGAVAAPLISGVEIKAESVCICFIDDCMDCDVPLAE FT LTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFIEPWPCSVSWQQQAASRLHP FT PRLKLEAKAKPRLDINITSVLIDQYVSTKESWMADYCKDDKDIESAKSEDWMGSSVDPP FT CFGQTEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTF FT LDDTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDK FT VGTFFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITV FT RSALIVRNRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGV FT FFCKAPIHWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDS FT AKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIE FT LGVSLENFPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPY FT WLINKTGLPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIH FT PEGMPGWCQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPR FT YLLDNKSSHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDV FT PNCIWSGGFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRID FT NFSKVPVVFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMN FT DFQDNRQLYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKK FT KEPGKRSQLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEP FT LMLRKPDRRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLG FT PVPPEQQFINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQEL FT QKLKNPDTEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSI FT QDVQVDNQLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMIT FT AQRFTVQIEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISI FT PQIKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILK FT HFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAA FT KFAGTLSDGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTV FT EGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVR FT KPRCCTGPQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFL FT KSGDYVDREAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMV FT HVKSEVLAVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,12414031..12414278, FT 12415956..12416147,12416455..12416581,12418515..12418657, FT 12422776..12422906,12423128..12423303,12428523..12428646, FT 12429522..12429757,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BX641035.1" FT /note="match: ESTs: Em:BG714328.1 Em:BQ005959.1 FT Em:BX282193.1 Em:CB044598.1 Em:R10290.1" FT mRNA join(complement(AL031276.1:12231..12334), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37401, FT 12414031..12414278,12415956..12416147,12416455..12416581, FT 12418515..12418657,12422776..12422906,12423128..12423303, FT 12428523..12428646,12429522..12429757, FT AL109757.14:5220..5318) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-002" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK125118.1" FT mRNA join(12427725..12427756,12428523..12428646, FT 12429522..12429757,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT AL031296.1:34723..34796,AL031296.1:38964..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-005" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BC025329.1" FT /note="match: ESTs: Em:BF205658.1" FT misc_feature 12427788 FT /note="Clone_left_end: RP4-636F13" FT CDS join(complement(AL031276.1:77252..77348), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT 12414031..12414278,12415956..12416147,12416455..12416581, FT 12418515..12418657,12422776..12422906,12423128..12423303, FT 12428523..12428646,12429522..12429757, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..87747) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /standard_name="OTTHUMP00000015345" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q86UB4 Tr:Q9NSJ3 Tr:Q9UIM0" FT /protein_id="CAI19414.1" FT /translation="MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKD FT ALKELELPFEVKAGFIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQDFNDEKEKL FT LERERKKALLQALEEKWKNDRQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGV FT TNPSHPFAFGICIKNVSMQNAVNEPVQKLMRKKQLDVAEFSIYWDVDCTLLGDLPQMEL FT QEAMARSMESRSHHYVLEPVFASALLKRNCSKKPLRSRHSPRIDCDIQLETIPLKLSQL FT QYRQIMEFLKELERKERQVKFRRWKPKVAISKNCREWWYFALNANLYEIREQRKRCTWD FT FMLHRARDAVSYTDKYFNKLKGGLLSTDDKEEMCRIEEEQSFEELKILRELVHDRFHKQ FT EELAESLREPQFDSPGACPGAPEPGGGSGMLQYLQSWFPGWGGWYGQQTPEGNVVEGLS FT AEQQEQWIPEEILGTEEFFDPTADASCMNTYTKRDHVFAKLNLQLQRGTVTLLHKEQGT FT PQMNESAFMQLEFSDVKLLAESLPRRNSSLLSVRLGGLFLRDLATEGTMFPLLVFPNPQ FT KEVGRVSQSFGLQTTSADRSDHYPAADPDGPVFEMLYERNPAHSHFERRLNVSTRPLNI FT IYNPQAIKKVADFFYKGKVHTSGFGYQSELELRVAEAARRQYNKLKMQTKAEIRQTLDR FT LLVGDFIEESKRWTVRLDISAPQVIFPDDFKFKNPVLVVVDLGRMLLTNTQDNSRRKSR FT DGSASEETQFSDDEYKTPLATPPNTPPPESSSSNGEKTPPFSGVEFSEEQLQAHLMSTK FT MYERYSLSFMDLQIMVGRVKDNWKHVQDIDVGPTHVVEKFNVHLQLERRLIYTSDPKYP FT GAVLSGNLPDLKIHINEDKISALKNCFALLTTPEMKTSDTQIKEKIFPQEEQRGSLQDS FT VMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVK FT RPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPN FT VAHLTDGATLNDRSATSVSLDKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQV FT NNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTYEQNTEV FT AVEIHRLNLLLLRTVGMANREKYGRKIATASIGGTKVNVSMGSTFDMNGSLGCLQLMDL FT TQDNVKNQYVVSIGNSVGYENIISDIGYFESVFVRMEDAALTEALSFTFVERSKQECFL FT NLKMASLHYNHSAKFLKELTLSMDELEENFRGMLKSAATKVTTVLATKTAEYSEMVSLF FT ETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHL FT GQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAGREAVGSEGSRMFCPPSGSGS FT ANSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIERESELTFSLSPDDLGTS FT SIMKIEGKFVNPVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLS FT TCGESSVERKENGLFSHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLSGDLTLG FT AQGLVSLKFQDFEVEFSKDHPQTLSIQIALHSLLMEDLLEKNPDSKYKNLMVSRGAPKP FT SSLAQKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPTSASRKKQKEVQDK FT DYPLTPPPSPTVDEPKILVGKSKFDDSLVHINIFLVDKKHPEFSSSYNRVNRSIDVDFN FT CLDVLITLQTWVVILDFFGIGSTADNHAMRLPPEGILHNVKLEPHASMESGLQDPVNTK FT LDLKVHSLSLVLNKTTSELAKANVSKLVAHLEMIEGDLALQGSIGSLSLSDLTCHGEFY FT RERFTTSGEEALIFQTFKYGRPDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQH FT FTQLQDVLGRQRAAIEGQTVRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGK FT LKVKNKFLFAGFPGTFSLQDKESVPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPL FT AGMSLGSLKSEFVPSTSTKQQGPQPTLSVGQESSSPEDHVCLLDCVVVDLQDMDIFAAE FT RHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISI FT HGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTCMCF FT LIDMVNVSLELKDPKRKEGAGSLARFDFKKCKLLYESFSNQTKSINLVSHSMMAFDTRY FT AGQKTSPGMTNVFSCIFQPAKNSSTTQGSIQIELHFRSTKDSSCFTVVLNNLRVFLIFD FT WLLLVHDFLHTPSDIKKQNHVTPSRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHL FT EVKVNVTGTEFVVIEDVSCFDTNAIILKGTTVLTYKPRFVDRPFSGSLFGIEVFSCRLG FT NEHDTALSIVDPVQIQMELVGNSSYQNSSGLMDAFNSEDFPPVLEIQLQALDIRLSYND FT VQLFLAIAKSIPEQANAAVPDSVALESDSVGTYLPGASRVGEEIREGTRHTLDPVLELQ FT LARLQELGFSMDDCRKALLACQGQLKKAASWLFKNAEPLKSLSLASTSRDSPGAVAAPL FT ISGVEIKAESVCICFIDDCMDCDVPLAELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNR FT ALSGWEPFIEPWPCSVSWQQQAASRLHPPRLKLEAKAKPRLDINITSVLIDQYVSTKES FT WMADYCKDDKDIESAKSEDWMGSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYAREV FT KTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNV FT SEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDKVGTFFRY FT AAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR FT NRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGVFFCKAPI FT HWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDSAKQIFRQ FT PGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIELGVSLEN FT FPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPYWLINKTG FT LPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIHPEGMPGW FT CQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKS FT SHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSG FT GFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPV FT VFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMNDFQDNRQ FT LYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKKKEPGKRS FT QLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEPLMLRKPD FT RRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQ FT FINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQELQKLKNPD FT TEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDN FT QLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMITAQRFTVQ FT IEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSV FT FTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELL FT SQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLS FT DGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEG FT GVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVRKPRCCTG FT PQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFLKSGDYVD FT REAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMVHVKSEVL FT AVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:81495..81548), FT complement(AL031276.1:77252..77424), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT 12414031..12414278,12415956..12416147,12416455..12416581, FT 12418515..12418657,12422776..12422906,12423128..12423303, FT 12428523..12428646,12429522..12429757, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AB007922.3 Em:AK057675.1 FT Em:AK074350.1 Em:AL162331.1 Em:AL833079.1 Em:BC028115.1 FT Em:BC051804.1" FT /note="match: ESTs: Em:AI077324.1 Em:AI275077.1 FT Em:AI359540.1 Em:AI825257.1 Em:AL118592.1 Em:AL598064.1 FT Em:AL703898.1 Em:AU129407.1 Em:AW864675.1 Em:BF334941.1 FT Em:BF365579.1 Em:BF377336.1 Em:BF885418.1 Em:BF911498.1 FT Em:BG994160.1 Em:BI061932.1 Em:BI063205.1 Em:BM719840.1 FT Em:BX488817.1 Em:CA310426.1 Em:CA394072.1 Em:CA434794.1 FT Em:CB045261.1 Em:CB321851.1 Em:CD364663.1 Em:CD655090.1" FT misc_feature 12430586..12483331 FT /note="annotated region of clone" FT CDS join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,12433805..12433913, FT 12438482..12438645,12439542..12439650,12443035..12443214, FT 12445319..12445432,12446244..12446393,12460238..12460387, FT 12461661..12461757,12463878..12464026,12475140..12475274, FT 12476713..12476880,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..87747) FT /codon_start=2 FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /standard_name="OTTHUMP00000015346" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /protein_id="CAI22115.1" FT /translation="TEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTLS FT VGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTG FT GSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLG FT EPIEEFMRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLARFDF FT KKCKLLYESFSNQTKSINLVSHSMMAFDTRYAGQKTSPGMTNVFSCIFQPAKNSSTTQG FT SIQIELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDIKKQNHVTPSRHRN FT SSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSCFDTNAIILK FT GTTVLTYKPRFVDRPFSGSLFGIEVFSCRLGNEHDTALSIVDPVQIQMELVGNSSYQNS FT SGLMDAFNSEDFPPVLEIQLQALDIRLSYNDVQLFLAIAKSIPEQANAAVPDSVALESD FT SVGTYLPGASRVGEEIREGTRHTLDPVLELQLARLQELGFSMDDCRKALLACQGQLKKA FT ASWLFKNAEPLKSLSLASTSRDSPGAVAAPLISGVEIKAESVCICFIDDCMDCDVPLAE FT LTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFIEPWPCSVSWQQQAASRLHP FT PRLKLEAKAKPRLDINITSVLIDQYVSTKESWMADYCKDDKDIESAKSEDWMGSSVDPP FT CFGQTEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTF FT LDDTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDK FT VGTFFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITV FT RSALIVRNRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGV FT FFCKAPIHWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDS FT AKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIE FT LGVSLENFPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPY FT WLINKTGLPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIH FT PEGMPGWCQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPR FT YLLDNKSSHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDV FT PNCIWSGGFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRID FT NFSKVPVVFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMN FT DFQDNRQLYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKK FT KEPGKRSQLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEP FT LMLRKPDRRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLG FT PVPPEQQFINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQEL FT QKLKNPDTEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSI FT QDVQVDNQLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMIT FT AQRFTVQIEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISI FT PQIKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILK FT HFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAA FT KFAGTLSDGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTV FT EGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVR FT KPRCCTGPQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFL FT KSGDYVDREAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMV FT HVKSEVLAVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,12433805..12433913, FT 12438482..12438645,12439542..12439650,12443035..12443214, FT 12445319..12445432,12446244..12446393,12460238..12460387, FT 12461661..12461757,12463878..12464026,12475140..12475274, FT 12476713..12476880,AL031296.1:34723..34855, FT AL031296.1:38925..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BX641035.1" FT /note="match: ESTs: Em:BG714328.1 Em:BQ005959.1 FT Em:BX282193.1 Em:CB044598.1 Em:R10290.1" FT mRNA join(complement(AL031276.1:12231..12334), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT 12433805..12433903) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-002" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK125118.1" FT mRNA join(BX784396.1:14672..14703,BX784396.1:15470..15593, FT BX784396.1:16469..16704,12433805..12433913, FT 12438482..12438645,12439542..12439650,12443035..12443214, FT 12445319..12445432,12446244..12446393,12460238..12460387, FT 12461661..12461757,12463878..12464026,12475140..12475274, FT 12476713..12476880,AL031296.1:34723..34796, FT AL031296.1:38964..39120,AL031296.1:76223..76354, FT AL031296.1:85576..85816,AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-005" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BC025329.1" FT /note="match: ESTs: Em:BF205658.1" FT misc_feature 12455232 FT /note="Clone_right_end: RP5-1190M18" FT misc_feature 12457442..12457570 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(12460366..12460387,12462621..12462755, FT 12463878..12464001) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-010" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: ESTs: Em:BF742038.1" FT mRNA join(12467307..12467383,12475140..12475274, FT 12476713..12476880) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-013" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: ESTs: Em:BY022784.1 Em:BY023464.1 FT Em:BY025695.1" FT mRNA join(12469891..12469947,12475140..12475274, FT 12476713..12476880) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-011" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: ESTs: Em:BQ430009.1" FT misc_feature 12471524..12471735 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 12479332 FT /note="Clone_left_end: RP5-888M10" FT CDS join(complement(AL031276.1:77252..77348), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT 12433805..12433913,12438482..12438645,12439542..12439650, FT 12443035..12443214,12445319..12445432,12446244..12446393, FT 12460238..12460387,12461661..12461757,12463878..12464026, FT 12475140..12475274,12476713..12476880, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..87747) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /standard_name="OTTHUMP00000015345" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q86UB4 Tr:Q9NSJ3 Tr:Q9UIM0" FT /protein_id="CAI22116.1" FT /translation="MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKD FT ALKELELPFEVKAGFIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQDFNDEKEKL FT LERERKKALLQALEEKWKNDRQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGV FT TNPSHPFAFGICIKNVSMQNAVNEPVQKLMRKKQLDVAEFSIYWDVDCTLLGDLPQMEL FT QEAMARSMESRSHHYVLEPVFASALLKRNCSKKPLRSRHSPRIDCDIQLETIPLKLSQL FT QYRQIMEFLKELERKERQVKFRRWKPKVAISKNCREWWYFALNANLYEIREQRKRCTWD FT FMLHRARDAVSYTDKYFNKLKGGLLSTDDKEEMCRIEEEQSFEELKILRELVHDRFHKQ FT EELAESLREPQFDSPGACPGAPEPGGGSGMLQYLQSWFPGWGGWYGQQTPEGNVVEGLS FT AEQQEQWIPEEILGTEEFFDPTADASCMNTYTKRDHVFAKLNLQLQRGTVTLLHKEQGT FT PQMNESAFMQLEFSDVKLLAESLPRRNSSLLSVRLGGLFLRDLATEGTMFPLLVFPNPQ FT KEVGRVSQSFGLQTTSADRSDHYPAADPDGPVFEMLYERNPAHSHFERRLNVSTRPLNI FT IYNPQAIKKVADFFYKGKVHTSGFGYQSELELRVAEAARRQYNKLKMQTKAEIRQTLDR FT LLVGDFIEESKRWTVRLDISAPQVIFPDDFKFKNPVLVVVDLGRMLLTNTQDNSRRKSR FT DGSASEETQFSDDEYKTPLATPPNTPPPESSSSNGEKTPPFSGVEFSEEQLQAHLMSTK FT MYERYSLSFMDLQIMVGRVKDNWKHVQDIDVGPTHVVEKFNVHLQLERRLIYTSDPKYP FT GAVLSGNLPDLKIHINEDKISALKNCFALLTTPEMKTSDTQIKEKIFPQEEQRGSLQDS FT VMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVK FT RPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPN FT VAHLTDGATLNDRSATSVSLDKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQV FT NNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTYEQNTEV FT AVEIHRLNLLLLRTVGMANREKYGRKIATASIGGTKVNVSMGSTFDMNGSLGCLQLMDL FT TQDNVKNQYVVSIGNSVGYENIISDIGYFESVFVRMEDAALTEALSFTFVERSKQECFL FT NLKMASLHYNHSAKFLKELTLSMDELEENFRGMLKSAATKVTTVLATKTAEYSEMVSLF FT ETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHL FT GQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAGREAVGSEGSRMFCPPSGSGS FT ANSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIERESELTFSLSPDDLGTS FT SIMKIEGKFVNPVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLS FT TCGESSVERKENGLFSHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLSGDLTLG FT AQGLVSLKFQDFEVEFSKDHPQTLSIQIALHSLLMEDLLEKNPDSKYKNLMVSRGAPKP FT SSLAQKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPTSASRKKQKEVQDK FT DYPLTPPPSPTVDEPKILVGKSKFDDSLVHINIFLVDKKHPEFSSSYNRVNRSIDVDFN FT CLDVLITLQTWVVILDFFGIGSTADNHAMRLPPEGILHNVKLEPHASMESGLQDPVNTK FT LDLKVHSLSLVLNKTTSELAKANVSKLVAHLEMIEGDLALQGSIGSLSLSDLTCHGEFY FT RERFTTSGEEALIFQTFKYGRPDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQH FT FTQLQDVLGRQRAAIEGQTVRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGK FT LKVKNKFLFAGFPGTFSLQDKESVPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPL FT AGMSLGSLKSEFVPSTSTKQQGPQPTLSVGQESSSPEDHVCLLDCVVVDLQDMDIFAAE FT RHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISI FT HGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTCMCF FT LIDMVNVSLELKDPKRKEGAGSLARFDFKKCKLLYESFSNQTKSINLVSHSMMAFDTRY FT AGQKTSPGMTNVFSCIFQPAKNSSTTQGSIQIELHFRSTKDSSCFTVVLNNLRVFLIFD FT WLLLVHDFLHTPSDIKKQNHVTPSRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHL FT EVKVNVTGTEFVVIEDVSCFDTNAIILKGTTVLTYKPRFVDRPFSGSLFGIEVFSCRLG FT NEHDTALSIVDPVQIQMELVGNSSYQNSSGLMDAFNSEDFPPVLEIQLQALDIRLSYND FT VQLFLAIAKSIPEQANAAVPDSVALESDSVGTYLPGASRVGEEIREGTRHTLDPVLELQ FT LARLQELGFSMDDCRKALLACQGQLKKAASWLFKNAEPLKSLSLASTSRDSPGAVAAPL FT ISGVEIKAESVCICFIDDCMDCDVPLAELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNR FT ALSGWEPFIEPWPCSVSWQQQAASRLHPPRLKLEAKAKPRLDINITSVLIDQYVSTKES FT WMADYCKDDKDIESAKSEDWMGSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYAREV FT KTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNV FT SEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDKVGTFFRY FT AAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR FT NRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGVFFCKAPI FT HWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDSAKQIFRQ FT PGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIELGVSLEN FT FPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPYWLINKTG FT LPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIHPEGMPGW FT CQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKS FT SHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSG FT GFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPV FT VFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMNDFQDNRQ FT LYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKKKEPGKRS FT QLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEPLMLRKPD FT RRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQ FT FINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQELQKLKNPD FT TEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDN FT QLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMITAQRFTVQ FT IEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSV FT FTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELL FT SQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLS FT DGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEG FT GVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVRKPRCCTG FT PQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFLKSGDYVD FT REAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMVHVKSEVL FT AVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:81495..81548), FT complement(AL031276.1:77252..77424), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT 12433805..12433913,12438482..12438645,12439542..12439650, FT 12443035..12443214,12445319..12445432,12446244..12446393, FT 12460238..12460387,12461661..12461757,12463878..12464026, FT 12475140..12475274,12476713..12476880, FT AL031296.1:34723..34855,AL031296.1:38925..39120, FT AL031296.1:76223..76354,AL031296.1:85576..85816, FT AL031296.1:87616..90768) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AB007922.3 Em:AK057675.1 FT Em:AK074350.1 Em:AL162331.1 Em:AL833079.1 Em:BC028115.1 FT Em:BC051804.1" FT /note="match: ESTs: Em:AI077324.1 Em:AI275077.1 FT Em:AI359540.1 Em:AI825257.1 Em:AL118592.1 Em:AL598064.1 FT Em:AL703898.1 Em:AU129407.1 Em:AW864675.1 Em:BF334941.1 FT Em:BF365579.1 Em:BF377336.1 Em:BF885418.1 Em:BF911498.1 FT Em:BG994160.1 Em:BI061932.1 Em:BI063205.1 Em:BM719840.1 FT Em:BX488817.1 Em:CA310426.1 Em:CA394072.1 Em:CA434794.1 FT Em:CB045261.1 Em:CB321851.1 Em:CD364663.1 Em:CD655090.1" FT misc_feature 12483332..12604213 FT /note="annotated region of clone" FT CDS join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT 12516054..12516186,12520256..12520451,12557554..12557685, FT 12566907..12567147,12568947..12569078) FT /codon_start=2 FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /standard_name="OTTHUMP00000015346" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /protein_id="CAI23163.1" FT /translation="TEEPRGTHSQGQFTMPLAGMSLGSLKSEFVPSTSTKQQGPQPTLS FT VGQESSSPEDHVCLLDCVVVDLQDMDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTG FT GSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLG FT EPIEEFMRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLARFDF FT KKCKLLYESFSNQTKSINLVSHSMMAFDTRYAGQKTSPGMTNVFSCIFQPAKNSSTTQG FT SIQIELHFRSTKDSSCFTVVLNNLRVFLIFDWLLLVHDFLHTPSDIKKQNHVTPSRHRN FT SSSESAIVPKTVKSGVVTKRSSLPVSNERHLEVKVNVTGTEFVVIEDVSCFDTNAIILK FT GTTVLTYKPRFVDRPFSGSLFGIEVFSCRLGNEHDTALSIVDPVQIQMELVGNSSYQNS FT SGLMDAFNSEDFPPVLEIQLQALDIRLSYNDVQLFLAIAKSIPEQANAAVPDSVALESD FT SVGTYLPGASRVGEEIREGTRHTLDPVLELQLARLQELGFSMDDCRKALLACQGQLKKA FT ASWLFKNAEPLKSLSLASTSRDSPGAVAAPLISGVEIKAESVCICFIDDCMDCDVPLAE FT LTFSRLNFLQRVRTSPEGYAHFTLSGDYYNRALSGWEPFIEPWPCSVSWQQQAASRLHP FT PRLKLEAKAKPRLDINITSVLIDQYVSTKESWMADYCKDDKDIESAKSEDWMGSSVDPP FT CFGQTEVKTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTF FT LDDTHNVSEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDK FT VGTFFRYAAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITV FT RSALIVRNRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGV FT FFCKAPIHWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDS FT AKQIFRQPGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIE FT LGVSLENFPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPY FT WLINKTGLPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIH FT PEGMPGWCQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPR FT YLLDNKSSHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDV FT PNCIWSGGFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRID FT NFSKVPVVFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMN FT DFQDNRQLYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKK FT KEPGKRSQLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEP FT LMLRKPDRRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLG FT PVPPEQQFINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQEL FT QKLKNPDTEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSI FT QDVQVDNQLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMIT FT AQRFTVQIEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISI FT PQIKLSVFTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILK FT HFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAA FT KFAGTLSDGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTV FT EGVKTEGGVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVR FT KPRCCTGPQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFL FT KSGDYVDREAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMV FT HVKSEVLAVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:6887..>7047), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:29807..29912, FT BX682532.4:30926..31078,BX682532.4:33401..33536, FT BX682532.4:34632..34679,BX682532.4:36850..37000, FT BX682532.4:37191..37401,BX784396.1:978..1225, FT BX784396.1:2903..3094,BX784396.1:3402..3528, FT BX784396.1:5462..5604,BX784396.1:9723..9853, FT BX784396.1:10075..10250,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT 12516054..12516186,12520256..12520451,12557554..12557685, FT 12566907..12567147,12568947..12572099) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-003" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BX641035.1" FT /note="match: ESTs: Em:BG714328.1 Em:BQ005959.1 FT Em:BX282193.1 Em:CB044598.1 Em:R10290.1" FT mRNA join(BX784396.1:14672..14703,BX784396.1:15470..15593, FT BX784396.1:16469..16704,AL109757.14:5220..5328, FT AL109757.14:9897..10060,AL109757.14:10957..11065, FT AL109757.14:14450..14629,AL109757.14:16734..16847, FT AL109757.14:17659..17808,AL109757.14:31653..31802, FT AL109757.14:33076..33172,AL109757.14:35293..35441, FT AL109757.14:46555..46689,AL109757.14:48128..48295, FT 12516054..12516127,12520295..12520451,12557554..12557685, FT 12566907..12567147,12568947..12572099) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-005" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BC025329.1" FT /note="match: ESTs: Em:BF205658.1" FT mRNA join(12524995..12525304,12557554..12557685, FT 12566907..12567147,12568947..12572099) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-006" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK026719.1" FT mRNA join(12557280..12557685,12566907..12566961) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-012" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: ESTs: Em:CA941136.1" FT CDS join(complement(AL031276.1:77252..77348), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,12516054..12516186, FT 12520256..12520451,12557554..12557685,12566907..12567147, FT 12568947..12569078) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /standard_name="OTTHUMP00000015345" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q86UB4 Tr:Q9NSJ3 Tr:Q9UIM0" FT /protein_id="CAI23164.1" FT /translation="MLEGLVAWVLNTYLGKYVNNLNTDQLSVALLKGAVELENLPLKKD FT ALKELELPFEVKAGFIGKVTLQIPFYRPHVDPWVISISSLHLIGAPEKIQDFNDEKEKL FT LERERKKALLQALEEKWKNDRQQKGESYWYSVTASVVTRIVENIELKIQDVHLRFEDGV FT TNPSHPFAFGICIKNVSMQNAVNEPVQKLMRKKQLDVAEFSIYWDVDCTLLGDLPQMEL FT QEAMARSMESRSHHYVLEPVFASALLKRNCSKKPLRSRHSPRIDCDIQLETIPLKLSQL FT QYRQIMEFLKELERKERQVKFRRWKPKVAISKNCREWWYFALNANLYEIREQRKRCTWD FT FMLHRARDAVSYTDKYFNKLKGGLLSTDDKEEMCRIEEEQSFEELKILRELVHDRFHKQ FT EELAESLREPQFDSPGACPGAPEPGGGSGMLQYLQSWFPGWGGWYGQQTPEGNVVEGLS FT AEQQEQWIPEEILGTEEFFDPTADASCMNTYTKRDHVFAKLNLQLQRGTVTLLHKEQGT FT PQMNESAFMQLEFSDVKLLAESLPRRNSSLLSVRLGGLFLRDLATEGTMFPLLVFPNPQ FT KEVGRVSQSFGLQTTSADRSDHYPAADPDGPVFEMLYERNPAHSHFERRLNVSTRPLNI FT IYNPQAIKKVADFFYKGKVHTSGFGYQSELELRVAEAARRQYNKLKMQTKAEIRQTLDR FT LLVGDFIEESKRWTVRLDISAPQVIFPDDFKFKNPVLVVVDLGRMLLTNTQDNSRRKSR FT DGSASEETQFSDDEYKTPLATPPNTPPPESSSSNGEKTPPFSGVEFSEEQLQAHLMSTK FT MYERYSLSFMDLQIMVGRVKDNWKHVQDIDVGPTHVVEKFNVHLQLERRLIYTSDPKYP FT GAVLSGNLPDLKIHINEDKISALKNCFALLTTPEMKTSDTQIKEKIFPQEEQRGSLQDS FT VMNLTQSIVLLEQHTREVLVESQLLLAEFKVNCMQLGVESNGRYISVLKVFGTNAHFVK FT RPYDAEVSLTVHGLLLVDTMQTYGADFDLLMASHKNLSFDIPTGSLRDSRAQSPVSGPN FT VAHLTDGATLNDRSATSVSLDKILTKEQESLIKLEYQFVSSECPSMNLDSTLQVISLQV FT NNLDIILNPETIVELIGFLQKSFPKEKDDLSPQPLMTDFERSFREQGTYQSTYEQNTEV FT AVEIHRLNLLLLRTVGMANREKYGRKIATASIGGTKVNVSMGSTFDMNGSLGCLQLMDL FT TQDNVKNQYVVSIGNSVGYENIISDIGYFESVFVRMEDAALTEALSFTFVERSKQECFL FT NLKMASLHYNHSAKFLKELTLSMDELEENFRGMLKSAATKVTTVLATKTAEYSEMVSLF FT ETPRKTREPFILEENEIYGFDLASSHLDTVKLILNINIESPVVSIPRKPGSPELLVGHL FT GQIFIQNFVAGDDESRSDRLQVEIKDIKLYSLNCTQLAGREAVGSEGSRMFCPPSGSGS FT ANSQEEAHFTRHDFFESLHRGQAFHILNNTTIQFKLEKIPIERESELTFSLSPDDLGTS FT SIMKIEGKFVNPVQVVLAKHVYEQVLQTLDNLVYSEDLNKYPASATSSPCPDSPLPPLS FT TCGESSVERKENGLFSHSSLSNTSQKSLSVKEVKSFTQIQATFCISELQVQLSGDLTLG FT AQGLVSLKFQDFEVEFSKDHPQTLSIQIALHSLLMEDLLEKNPDSKYKNLMVSRGAPKP FT SSLAQKEYLSQSCPSVSNVEYPDMPRSLPSHMEEAPNVFQLYQRPTSASRKKQKEVQDK FT DYPLTPPPSPTVDEPKILVGKSKFDDSLVHINIFLVDKKHPEFSSSYNRVNRSIDVDFN FT CLDVLITLQTWVVILDFFGIGSTADNHAMRLPPEGILHNVKLEPHASMESGLQDPVNTK FT LDLKVHSLSLVLNKTTSELAKANVSKLVAHLEMIEGDLALQGSIGSLSLSDLTCHGEFY FT RERFTTSGEEALIFQTFKYGRPDPLLRREHDIRVSLRMASVQYVHTQRFQAEVVAFIQH FT FTQLQDVLGRQRAAIEGQTVRDQAQRCSRVLLDIEAGAPVLLIPESSRSNNLIVANLGK FT LKVKNKFLFAGFPGTFSLQDKESVPSASPTGIPKHSLRKTTSTEEPRGTHSQGQFTMPL FT AGMSLGSLKSEFVPSTSTKQQGPQPTLSVGQESSSPEDHVCLLDCVVVDLQDMDIFAAE FT RHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISI FT HGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTCMCF FT LIDMVNVSLELKDPKRKEGAGSLARFDFKKCKLLYESFSNQTKSINLVSHSMMAFDTRY FT AGQKTSPGMTNVFSCIFQPAKNSSTTQGSIQIELHFRSTKDSSCFTVVLNNLRVFLIFD FT WLLLVHDFLHTPSDIKKQNHVTPSRHRNSSSESAIVPKTVKSGVVTKRSSLPVSNERHL FT EVKVNVTGTEFVVIEDVSCFDTNAIILKGTTVLTYKPRFVDRPFSGSLFGIEVFSCRLG FT NEHDTALSIVDPVQIQMELVGNSSYQNSSGLMDAFNSEDFPPVLEIQLQALDIRLSYND FT VQLFLAIAKSIPEQANAAVPDSVALESDSVGTYLPGASRVGEEIREGTRHTLDPVLELQ FT LARLQELGFSMDDCRKALLACQGQLKKAASWLFKNAEPLKSLSLASTSRDSPGAVAAPL FT ISGVEIKAESVCICFIDDCMDCDVPLAELTFSRLNFLQRVRTSPEGYAHFTLSGDYYNR FT ALSGWEPFIEPWPCSVSWQQQAASRLHPPRLKLEAKAKPRLDINITSVLIDQYVSTKES FT WMADYCKDDKDIESAKSEDWMGSSVDPPCFGQSLPLVYLRTRSTASLTNLEHQIYAREV FT KTPKRRQPFVPFALRNHTGCTLWFATLTTTPTRAALSHSGSPGVVPEGNGTFLDDTHNV FT SEWREVLTGEEIPFEFEARGKLRHRHTHDLRIHQLQVRVNGWEQVSPVSVDKVGTFFRY FT AAPDKNSSSSTIGSPSSRTNIIHPQVYFSSLPPVRVVFAVTMEGSARKVITVRSALIVR FT NRLETPMELRLDSPSAPDKPVVLPAIMPGDSFAVPLHLTSWRLQARPKGLGVFFCKAPI FT HWTNVVKTAEISSSKRECHSMDTEKSRFFRFCVAIKKENYPDYMPSNIFSDSAKQIFRQ FT PGHTIYLLPTVVICNLLPCELDFYVKGMPINGTLKPGKEAALHTADTSQNIELGVSLEN FT FPLCKELLIPPGTQNYMVRMRLYDVNRRQLNLTIRIVCRAEGSLKIFISAPYWLINKTG FT LPLIFRQDNAKTDAAGQFEEHELARSLSPLLFCYADKEQPNLCTMRIGRGIHPEGMPGW FT CQGFSLDGGSGVRALKVIQQGNRPGLIYNIGIDVKKGRGRYIDTCMVIFAPRYLLDNKS FT SHKLAFAQREFARGQGTANPEGYISTLPGSSVVFHWPRNDYDQLLCVRLMDVPNCIWSG FT GFEVNKNNSFHINMRDTLGKCFFLRVEITLRGATYRISFSDTDQLPPPFRIDNFSKVPV FT VFTQHGVAEPRLRTEVKPMTSLDYAWDEPTLPPFITLTVKGAGSSEINCNMNDFQDNRQ FT LYYENFIYIAATYTFSGLQEGTGRPVASNKAITCAELVLDVSPKTQRVILKKKEPGKRS FT QLWRMTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEPLMLRKPD FT RRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQ FT FINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQELQKLKNPD FT TEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDN FT QLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMITAQRFTVQ FT IEEKLLLKLLSFFGYDQAESEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSV FT FTSNKLPLDLKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELL FT SQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAAKFAGTLS FT DGLGKTMDNRHQSEREYIRYHAATSGEHLVAGIHGLAHGIIGGLTSVITSTVEGVKTEG FT GVSGFISGLGKGLVGTVTKPVAGALDFASETAQAVRDTATLSGPRTQAQRVRKPRCCTG FT PQGLLPRYSESQAEGQEQLFKLTDNIQDEFFIAVENIDSYCVLISSKAVYFLKSGDYVD FT REAIFLEVKYDDLYHCLVSKDHGKVYVQVTKKAVSTSSGVSIPGPSHQKPMVHVKSEVL FT AVKLSQEINYAKSLYYEQQLMLRLSENREQLELDS" FT mRNA join(complement(AL031276.1:81495..81548), FT complement(AL031276.1:77252..77424), FT complement(AL031276.1:69025..69102), FT complement(AL031276.1:67179..67369), FT complement(AL031276.1:66998..67078), FT complement(AL031276.1:62276..62392), FT complement(AL031276.1:57789..57893), FT complement(AL031276.1:55112..55282), FT complement(AL031276.1:54528..54628), FT complement(AL031276.1:53512..53680), FT complement(AL031276.1:50821..50922), FT complement(AL031276.1:50466..50667), FT complement(AL031276.1:49535..49714), FT complement(AL031276.1:44604..44734), FT complement(AL031276.1:43695..43770), FT complement(AL031276.1:42739..42909), FT complement(AL031276.1:40491..40621), FT complement(AL031276.1:38480..38612), FT complement(AL031276.1:33577..35790), FT complement(AL031276.1:31965..32116), FT complement(AL031276.1:27879..28910), FT complement(AL031276.1:23302..23392), FT complement(AL031276.1:20491..20617), FT complement(AL031276.1:17911..18091), FT complement(AL031276.1:12231..12413), FT complement(AL031276.1:6887..7109), FT complement(AL031276.1:2974..3184), FT complement(AL031276.1:1..161),BX784395.1:2001..2011, FT BX784395.1:2199..2311,BX682532.4:2142..2354, FT BX682532.4:6099..6364,BX682532.4:7524..7657, FT BX682532.4:9836..9991,BX682532.4:10563..10773, FT BX682532.4:11733..11807,BX682532.4:15675..15881, FT BX682532.4:17856..17945,BX682532.4:21253..21393, FT BX682532.4:23732..23854,BX682532.4:26258..26332, FT BX682532.4:29810..29912,BX682532.4:30926..31078, FT BX682532.4:33401..33536,BX682532.4:34632..34679, FT BX682532.4:36850..37000,BX682532.4:37191..37401, FT BX784396.1:978..1225,BX784396.1:2903..3094, FT BX784396.1:3402..3528,BX784396.1:5462..5604, FT BX784396.1:9723..9853,BX784396.1:10075..10250, FT BX784396.1:15470..15593,BX784396.1:16469..16704, FT AL109757.14:5220..5328,AL109757.14:9897..10060, FT AL109757.14:10957..11065,AL109757.14:14450..14629, FT AL109757.14:16734..16847,AL109757.14:17659..17808, FT AL109757.14:31653..31802,AL109757.14:33076..33172, FT AL109757.14:35293..35441,AL109757.14:46555..46689, FT AL109757.14:48128..48295,12516054..12516186, FT 12520256..12520451,12557554..12557685,12566907..12567147, FT 12568947..12572099) FT /gene="VPS13D" FT /locus_tag="RP5-888M10.1-001" FT /product="vacuolar protein sorting 13 homolog D (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AB007922.3 Em:AK057675.1 FT Em:AK074350.1 Em:AL162331.1 Em:AL833079.1 Em:BC028115.1 FT Em:BC051804.1" FT /note="match: ESTs: Em:AI077324.1 Em:AI275077.1 FT Em:AI359540.1 Em:AI825257.1 Em:AL118592.1 Em:AL598064.1 FT Em:AL703898.1 Em:AU129407.1 Em:AW864675.1 Em:BF334941.1 FT Em:BF365579.1 Em:BF377336.1 Em:BF885418.1 Em:BF911498.1 FT Em:BG994160.1 Em:BI061932.1 Em:BI063205.1 Em:BM719840.1 FT Em:BX488817.1 Em:CA310426.1 Em:CA394072.1 Em:CA434794.1 FT Em:CB045261.1 Em:CB321851.1 Em:CD364663.1 Em:CD655090.1" FT polyA_signal 12570396..12570401 FT polyA_site 12570416 FT polyA_signal 12572073..12572078 FT polyA_site 12572099 FT mRNA join(12587766..12587834,12588094..12588462) FT /locus_tag="RP5-888M10.2-001" FT /product="putative novel transcript" FT misc_feature 12604214..12660903 FT /note="annotated region of clone" FT misc_feature 12606213 FT /note="Clone_right_end: RP5-888M10" FT mRNA complement(join(12628421..12628453,12632756..12632881, FT 12640551..12640694,AL513016.5:2174..2409)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-002" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: ESTs: Em:BF246262.1" FT mRNA complement(join(12639796..12640694,AL513016.5:2174..2310)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-003" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: ESTs: Em:BM921248.1" FT mRNA complement(join(12627939..12628453,12632756..12632881, FT 12638746..12638984,12639321..12639440,12640551..12640694, FT AL513016.5:2769..3347)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-001" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: cDNAs: Em:AF061741.1 Em:AF061742.1 FT Em:BC002730.2 Em:BX648476.1" FT /note="match: ESTs: Em:AL577730.2 Em:BF037805.1 FT Em:BI833292.1 Em:BM698462.1 Em:BM820173.1 Em:BQ002634.1 FT Em:BQ009252.1 Em:BQ276358.1 Em:BQ691058.1 Em:BQ900179.1 FT Em:CA503294.1 Em:CB132994.1" FT CDS complement(join(12628369..12628453,12632756..12632881, FT 12638746..12638984,12639321..12639440,12640551..12640694, FT AL513016.5:2769..2963)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-001" FT /standard_name="OTTHUMP00000001866" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: proteins: Sw:O75911 Sw:O75911 Sw:O77769 FT Sw:O88876 Sw:O88876 Sw:O88876" FT /protein_id="CAI14999.1" FT /translation="MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITG FT GGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVY FT QTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRML FT ELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHT FT STEMFQGMRVRFPNLFPPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAA FT LEEIHKFSGTYTCMNTFKGRT" FT misc_feature 12608703..12608736 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT polyA_site complement(12627939) FT polyA_signal complement(12627957..12627962) FT CDS complement(join(<12638746..12638984,12639321..12639440, FT 12640551..12640634)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-004" FT /standard_name="OTTHUMP00000001867" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /protein_id="CAI15000.1" FT /translation="MGTECHYFICDVGNREEVYQTAKAVREKVGDITILVNNAAVVHGK FT SLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYC FT TSKASAFAFMESLTLGLLDCPGVSATTVLPFHTSTEMFQGMRV" FT misc_feature 12643010..12643685 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 12643417..12643571 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 12643675..12643685 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 12655035..12655040 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a clone PCR. Restriction digest FT data confirm the assembly" FT misc_feature 12655308..12655378 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 12655575..12655654 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(<12638746..12638984,12639321..12639440, FT 12640551..12640694,12655999..12656321)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-004" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: ESTs: Em:CD515672.1 Em:R47196.1" FT misc_feature 12658904 FT /note="Clone_left_end: RP11-290B1" FT misc_feature 12660231..12660254 FT /note="Sequence from overlapping clone RP11-290B1 FT (AL592487). Assembly confirmed by restriction digest" FT misc_feature 12660904..12676365 FT /note="annotated region of clone" FT misc_feature 12672366 FT /note="Clone_left_end: RP11-474O21" FT misc_feature 12676366..12825110 FT /note="annotated region of clone" FT mRNA complement(join(AL645761.8:24208..24240, FT AL645761.8:28543..28668,AL645761.8:36338..36481, FT 12676564..12676799)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-002" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: ESTs: Em:BF246262.1" FT mRNA complement(join(AL645761.8:35583..36481, FT 12676564..12676700)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-003" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: ESTs: Em:BM921248.1" FT mRNA complement(join(AL645761.8:23726..24240, FT AL645761.8:28543..28668,AL645761.8:34533..34771, FT AL645761.8:35108..35227,AL645761.8:36338..36481, FT 12677159..12677737)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-001" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: ESTs: Em:AL577730.2 Em:BF037805.1 FT Em:BI833292.1 Em:BM698462.1 Em:BM820173.1 Em:BQ002634.1 FT Em:BQ009252.1 Em:BQ276358.1 Em:BQ691058.1 Em:BQ900179.1 FT Em:CA503294.1 Em:CB132994.1" FT /note="match: cDNAs: Em:AF061741.1 Em:AF061742.1 FT Em:BC002730.2 Em:BX648476.1" FT CDS complement(join(AL645761.8:24156..24240, FT AL645761.8:28543..28668,AL645761.8:34533..34771, FT AL645761.8:35108..35227,AL645761.8:36338..36481, FT 12677159..12677353)) FT /gene="DHRS3" FT /locus_tag="RP11-514N2.1-001" FT /standard_name="OTTHUMP00000001866" FT /product="dehydrogenase/reductase (SDR family) member 3" FT /note="match: proteins: Sw:O75911 Sw:O75911 Sw:O77769 FT Sw:O88876 Sw:O88876 Sw:O88876" FT /protein_id="CAH74172.1" FT /translation="MVWKRLGALVMFPLQMIYLVVKAAVGLVLPAKLRDLSRENVLITG FT GGRGIGRQLAREFAERGARKIVLWGRTEKCLKETTEEIRQMGTECHYFICDVGNREEVY FT QTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRML FT ELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLPFHT FT STEMFQGMRVRFPNLFPPLKPETVARRTVEAVQLNQALLLLPWTMHALVILKSILPQAA FT LEEIHKFSGTYTCMNTFKGRT" FT CDS join(12704566..12704733,12711142..12711358, FT 12721802..12721865,12725972..12726746) FT /gene="AADACL4" FT /locus_tag="RP11-474O21.1-001" FT /standard_name="OTTHUMP00000001872" FT /product="arylacetamide deacetylase-like 4" FT /note="match: proteins: Tr:O28558 Tr:Q86WZ1 Tr:Q8BLF1 FT Tr:Q8BM81 Tr:Q8PDG3 Tr:Q9P2I4" FT /protein_id="CAH74173.1" FT /translation="MAVPWLVLLLALPIFFLGVFVWAVFEHFLTTDIPATLQHPAKLRF FT LHCIFLYLVTLGNIFEKLGICSMPKFIRFLHDSVRIKKDPELVVTDLRFGTIPVRLFQP FT KAASSRPRRGIIFYHGGATVFGSLDCYHGLCNYLARETESVLLMIGYRKLPDHHSPALF FT QDCMNASIHFLKALETYGVDPSRVVVCGESVGGAAVAAITQALVGRSDLPRIRAQVLIY FT PVVQAFCLQLPSFQQNQNVPLLSRKFMVTSLCNYLAIDLSWRDAILNGTCVPPDVWRKY FT EKWLSPDNIPKKFKNRGYQPWSPGPFNEAAYLEAKHMLDVENSPLIADDEVIAQLPEAF FT LVSCENDILRDDSLLYKKRLEDQGVRVTWYHLYDGFHGSIIFFDKKALSFPCSLKIVNA FT VVSYIKGI" FT mRNA join(12704566..12704733,12711142..12711358, FT 12721802..12721865,12725972..12727097) FT /gene="AADACL4" FT /locus_tag="RP11-474O21.1-001" FT /product="arylacetamide deacetylase-like 4" FT /note="match: ESTs: Em:AI804040.1 Em:BX096582.1" FT /note="match: cDNAs: Em:AK034567.1" FT misc_feature 12719815..12719859 FT /note="Sequence from overlapping clone RP11-290B1 FT (AL592487). Assembly confirmed by restriction digest" FT polyA_signal 12727068..12727073 FT polyA_site 12727097 FT CDS 12752923..12753027 FT /pseudo FT /locus_tag="RP11-474O21.2-001" FT /product="ribosomal protein L23a (RPL23A) pseudogene" FT /note="match: proteins: Sw:P62751 Sw:P62752 Tr:Q90YU4 FT Tr:Q9DFF6" FT mRNA join(12776118..12776347,12780885..12780948, FT 12785189..12788726) FT /gene="AADACL3" FT /locus_tag="RP11-474O21.3-001" FT /product="arylacetamide deacetylase-like 3" FT /note="match: cDNAs: Em:AK127828.1" FT mRNA join(12776146..12776347,12779477..12779693, FT 12780885..12780948,12785189..12785963) FT /gene="AADACL3" FT /locus_tag="RP11-474O21.3-002" FT /product="arylacetamide deacetylase-like 3" FT /note="match: ESTs: Em:BG697255.1" FT CDS join(12776344..12776347,12780885..12780948, FT 12785189..12785963) FT /gene="AADACL3" FT /locus_tag="RP11-474O21.3-001" FT /standard_name="OTTHUMP00000001868" FT /product="arylacetamide deacetylase-like 3" FT /protein_id="CAH74175.1" FT /translation="METHHGICSRLCKESDSVVLAVGYRKLPKHKFPVPVRDCLVATIH FT FLKSLDAYGVDPARVVVCGDSFGGAIAAVVCQQLVDRPDLPRIRAQILIYAILQALDLQ FT TPSFQQRKNIPLLTWSFICYCFFQNLDFSSSWQEVIMKGAHLPAEVWEKYRKWLGPENI FT PERFKERGYQLKPHEPMNEAAYLEVSVVLDVMCSPLIAEDDIVSQLPETCIVSCEYDAL FT RDNSLLYKKRLEDLGVPVTWHHMEDGFHGVLRTIDMSFLHFPCSMRILSALVQFVKGL" FT CDS join(12779480..12779693,12780885..12780948, FT 12785189..12785963) FT /gene="AADACL3" FT /locus_tag="RP11-474O21.3-002" FT /standard_name="OTTHUMP00000001869" FT /product="arylacetamide deacetylase-like 3" FT /note="match: proteins: Sw:P22760 Tr:O28558 Tr:Q97VT8" FT /protein_id="CAH74176.2" FT /translation="MIFEKLRICSMPQFFCFMQDLPPLKYDPDVVVTDFRFGTIPVKLY FT QSKASTCTLKPGIVYYHGGGGVMGSLKTHHGICSRLCKESDSVVLAVGYRKLPKHKFPV FT PVRDCLVATIHFLKSLDAYGVDPARVVVCGDSFGGAIAAVVCQQLVDRPDLPRIRAQIL FT IYAILQALDLQTPSFQQRKNIPLLTWSFICYCFFQNLDFSSSWQEVIMKGAHLPAEVWE FT KYRKWLGPENIPERFKERGYQLKPHEPMNEAAYLEVSVVLDVMCSPLIAEDDIVSQLPE FT TCIVSCEYDALRDNSLLYKKRLEDLGVPVTWHHMEDGFHGVLRTIDMSFLHFPCSMRIL FT SALVQFVKGL" FT mRNA join(12806163..12806489,12815650..12815763, FT 12819243..12819420,12820703..12823847) FT /gene="C1orf158" FT /locus_tag="RP11-474O21.4-001" FT /product="chromosome 1 open reading frame 158" FT /note="match: ESTs: Em:AA412565.1 Em:AA421403.1 FT Em:AA758889.1 Em:AA889516.1 Em:AI656449.1 Em:BI825136.1 FT Em:BX094234.1 Em:CB241951.1" FT /note="match: cDNAs: Em:AK026705.1 Em:BC029894.1" FT mRNA join(12806335..12806489,12813307..12813875) FT /gene="C1orf158" FT /locus_tag="RP11-474O21.4-003" FT /product="chromosome 1 open reading frame 158" FT /note="match: ESTs: Em:BU608072.1" FT mRNA join(12806373..12806489,12819243..12819420, FT 12820703..12821102) FT /gene="C1orf158" FT /locus_tag="RP11-474O21.4-002" FT /product="chromosome 1 open reading frame 158" FT /note="match: ESTs: Em:BQ771713.1" FT CDS join(12806379..12806489,12815650..12815763, FT 12819243..12819420,12820703..12820884) FT /gene="C1orf158" FT /locus_tag="RP11-474O21.4-001" FT /standard_name="OTTHUMP00000001870" FT /product="chromosome 1 open reading frame 158" FT /note="match: proteins: Sw:Q4KKZ1 Sw:Q8N1D5" FT /protein_id="CAH74178.1" FT /translation="MFLTAVNPQPLSTPSWQIETKYSTKVLTGNWMEERRKFTRDTDKT FT PQSIYRKEYIPFPDHRPDQISRWYGKRKVEGLPYKHLITHHQEPPHRYLISTYDDHYNR FT HGYNPGLPPLRTWNGQKLLWLPEKSDFPLLAPPTNYGLYEQLKQRQLTPKAGLKQSTYT FT SSYPRPPLCAMSWREHAVPVPPHRLHPFPHF" FT CDS join(12806379..12806489,12819243..12819420, FT 12820703..12820884) FT /gene="C1orf158" FT /locus_tag="RP11-474O21.4-002" FT /standard_name="OTTHUMP00000001871" FT /product="chromosome 1 open reading frame 158" FT /protein_id="CAH74177.1" FT /translation="MFLTAVNPQPLSTPSWQIETKYSTKVLTGNWMEERRKGLPYKHLI FT THHQEPPHRYLISTYDDHYNRHGYNPGLPPLRTWNGQKLLWLPEKSDFPLLAPPTNYGL FT YEQLKQRQLTPKAGLKQSTYTSSYPRPPLCAMSWREHAVPVPPHRLHPFPHF" FT polyA_signal 12821083..12821088 FT polyA_site 12821102 FT misc_feature 12821136 FT /note="Clone_left_end: RP5-1198H6" FT polyA_signal 12823825..12823830 FT polyA_site 12823847 FT misc_feature complement(12825111..12856103) FT /note="annotated region of clone" FT mRNA join(12854840..12855118,12855587..12856103, FT complement(AL022101.1:118568..119098)) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-002" FT /product="PRAME family member 1" FT /note="match: cDNAs: Em:BC040902.1" FT /note="match: ESTs: Em:BM563435.1" FT CDS join(12854988..12855118,12855587..12856103, FT complement(AL022101.1:119057..119098)) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-002" FT /standard_name="OTTHUMP00000001926" FT /product="PRAME family member 1" FT /note="match: proteins: Tr:Q8IW67" FT /protein_id="CAI19424.1" FT /translation="MKGGKAHQTCPFHNRTSVLTGLVITNDPVSDSLFVKGCFELQERC FT LQNPLENLELTYGYLLEEDMKCLSQYPSLGYLKHLNLSYVLLFRISLEPLGALLEKIAA FT SLKTLILEGCQIHYSQLSAILPALSRCSQLTTFYFGRNCMSIDALKDLLRHTSGLSKLS FT LETYPAPEESLNSLVRVNWEIFTPLRAELMCTLREVRQPKRIFIGPTPCPSCGSSPSEE FT LELHLCC" FT CDS join(12853377..12853663,12854064..12854642, FT 12855587..12856103,complement(AL022101.1:119057..119098)) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-001" FT /standard_name="OTTHUMP00000001925" FT /product="PRAME family member 1" FT /note="match: proteins: Sw:O95521 Sw:P78395 Tr:Q99MW3" FT /protein_id="CAI19425.1" FT /translation="MSIQAPPRLLELAGQSLLRDQALSISAMEELPRVLYLPLFMEAFS FT RRHFQTLTVMVQAWPFTCLPLGSLMKTLHLETLKALLEGLHMLLTQKDRPRRWKLQVLD FT LRDVDENFWARWPGAWALSCFPETTSKRQTAEDCPRMGEHQPLKVFIDICLKEIPQDEC FT LRYLFQWVYQRRGLVHLCCSKLVNYLTPIKYLRKSLKIIYLNSIQELEIRNMSWPRLIR FT KLRCYLKEMKNLRKLVFSRCHHYTSDNELQGRLVAKFSSVFLRLEHLQLLKIKLITFFS FT GHLEQLIRCLQNPLENLELTYGYLLEEDMKCLSQYPSLGYLKHLNLSYVLLFRISLEPL FT GALLEKIAASLKTLILEGCQIHYSQLSAILPALSRCSQLTTFYFGRNCMSIDALKDLLR FT HTSGLSKLSLETYPAPEESLNSLVRVNWEIFTPLRAELMCTLREVRQPKRIFIGPTPCP FT SCGSSPSEELELHLCC" FT mRNA join(12851546..12851623,12853352..12853663, FT 12854064..12854642,12855587..12856103, FT complement(AL022101.1:118425..119098)) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-001" FT /product="PRAME family member 1" FT /note="match: cDNAs: Em:AK125568.1 Em:AL049686.1" FT /note="match: ESTs: Em:AA448412.1 Em:BX092416.1" FT polyA_site 12838049 FT polyA_signal 12838027..12838032 FT mRNA join(12834984..12835297,12835686..12836261, FT 12837154..12838049) FT /gene="PRAMEF12" FT /locus_tag="RP5-1198H6.1-001" FT /product="PRAME family member 12" FT /note="match: ESTs: Em:AI339502.1 Em:AI339503.1" FT CDS join(12835011..12835297,12835686..12836261, FT 12837154..12837742) FT /gene="PRAMEF12" FT /locus_tag="RP5-1198H6.1-001" FT /standard_name="OTTHUMP00000001924" FT /product="PRAME family member 12" FT /note="match: proteins: Sw:O95521 Sw:P78395 Tr:Q810Z0" FT /protein_id="CAA19295.1" FT /translation="MSLQAPPRLLELAEQSLLRDRALAIPTLEELPRELFPPLFMEAFT FT RRCCETLTTMVQAWPFTCLPLGSLMKSCNLEIFRAVLEGLDALLAQKVRPRRWKLQVLD FT LRNVDENFWGIWSGASALSPEALSKRRTAGNCPRPGGQQPLMVILDLCFKNGMLDECLT FT HFLEWGKQRKGLLHVCCKELQIFGIAIHRIIEVLNTVELDCIQEVEVCCPWELSILIRF FT APYLGQMRNLRKLVLFNIHVSACIPLDRKEQFVIQFTSQFLKLDYFQKLYMHSVSFLEG FT HLDQLLRCLQAPLETVVMTECLLSESDLKHLSWCPSIRQLKELDLRGITLTHFSPEPLS FT VLLEQAEATLQTLDLEDCGIVDSQLSAILPALSRCSQLSTFSFCGNLISMAALENLLRH FT TVGLSKLSLELYPAPLESYDAQGALCWGRFSQLGAELMKTLRDLRQPKIIVFSTVPCPR FT CGIRASYDLEPSHCLLNACCQGGFI" FT misc_feature complement(12856104..12975201) FT /note="annotated region of clone" FT mRNA join(complement(AL023753.1:986..1264), FT complement(AL023753.1:1..517),12856104..12856634) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-002" FT /product="PRAME family member 1" FT /note="match: cDNAs: Em:BC040902.1" FT /note="match: ESTs: Em:BM563435.1" FT CDS join(complement(AL023753.1:986..1116), FT complement(AL023753.1:1..517),12856104..12856145) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-002" FT /standard_name="OTTHUMP00000001926" FT /product="PRAME family member 1" FT /note="match: proteins: Tr:Q8IW67" FT /protein_id="CAI22989.1" FT /translation="MKGGKAHQTCPFHNRTSVLTGLVITNDPVSDSLFVKGCFELQERC FT LQNPLENLELTYGYLLEEDMKCLSQYPSLGYLKHLNLSYVLLFRISLEPLGALLEKIAA FT SLKTLILEGCQIHYSQLSAILPALSRCSQLTTFYFGRNCMSIDALKDLLRHTSGLSKLS FT LETYPAPEESLNSLVRVNWEIFTPLRAELMCTLREVRQPKRIFIGPTPCPSCGSSPSEE FT LELHLCC" FT CDS join(complement(AL023753.1:2441..2727), FT complement(AL023753.1:1462..2040), FT complement(AL023753.1:1..517),12856104..12856145) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-001" FT /standard_name="OTTHUMP00000001925" FT /product="PRAME family member 1" FT /note="match: proteins: Sw:O95521 Sw:P78395 Tr:Q99MW3" FT /protein_id="CAI22990.1" FT /translation="MSIQAPPRLLELAGQSLLRDQALSISAMEELPRVLYLPLFMEAFS FT RRHFQTLTVMVQAWPFTCLPLGSLMKTLHLETLKALLEGLHMLLTQKDRPRRWKLQVLD FT LRDVDENFWARWPGAWALSCFPETTSKRQTAEDCPRMGEHQPLKVFIDICLKEIPQDEC FT LRYLFQWVYQRRGLVHLCCSKLVNYLTPIKYLRKSLKIIYLNSIQELEIRNMSWPRLIR FT KLRCYLKEMKNLRKLVFSRCHHYTSDNELQGRLVAKFSSVFLRLEHLQLLKIKLITFFS FT GHLEQLIRCLQNPLENLELTYGYLLEEDMKCLSQYPSLGYLKHLNLSYVLLFRISLEPL FT GALLEKIAASLKTLILEGCQIHYSQLSAILPALSRCSQLTTFYFGRNCMSIDALKDLLR FT HTSGLSKLSLETYPAPEESLNSLVRVNWEIFTPLRAELMCTLREVRQPKRIFIGPTPCP FT SCGSSPSEELELHLCC" FT mRNA join(complement(AL023753.1:4481..4558), FT complement(AL023753.1:2441..2752), FT complement(AL023753.1:1462..2040), FT complement(AL023753.1:1..517),12856104..12856777) FT /gene="PRAMEF1" FT /locus_tag="RP5-1198H6.2-001" FT /product="PRAME family member 1" FT /note="match: cDNAs: Em:AK125568.1 Em:AL049686.1" FT /note="match: ESTs: Em:AA448412.1 Em:BX092416.1" FT mRNA complement(join(<12952794..12953305,12954417..12954995, FT 12955392..12955703,12958047..12958101)) FT /gene="PRAMEF10" FT /locus_tag="RP5-845O24.7-001" FT /product="PRAME family member 10" FT /note="match: cDNAs: Em:AL049682.1" FT CDS complement(join(<12952794..12953305,12954417..12954995, FT 12955392..12955678)) FT /gene="PRAMEF10" FT /locus_tag="RP5-845O24.7-001" FT /standard_name="OTTHUMP00000001962" FT /product="PRAME family member 10" FT /note="match: proteins: Sw:O95521 Sw:P78395" FT /protein_id="CAA17876.1" FT /translation="MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFS FT MRRFEALKLMVQAWPFLSLPLGSLMKTLHLETLQAVLRGLDTLVAQKVRPRRWKLQVLD FT LRDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDEC FT LSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTG FT KFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIK FT EHLEHLLRYLKNPLGAFIFSDAYLTDRDMECLSQYPSLSQLKELRLIHILMWTTHLEPL FT GVLLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLR FT HTGGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCP FT N" FT mRNA complement(join(12939045..12939926,12941675..12942256, FT 12942923..12943231,12945971..12946025)) FT /gene="PRAMEF4" FT /locus_tag="RP5-845O24.6-001" FT /product="PRAME family member 4" FT /note="match: cDNAs: Em:AL049681.1" FT /note="match: ESTs: Em:BG197761.1 Em:BG208959.1" FT CDS complement(join(12939365..12939926,12941675..12942256, FT 12942923..12943215)) FT /gene="PRAMEF4" FT /locus_tag="RP5-845O24.6-001" FT /standard_name="OTTHUMP00000001966" FT /product="PRAME family member 4" FT /note="match: proteins: Sw:O95521 Sw:P78395 Tr:Q8CE24" FT /protein_id="CAI22991.1" FT /translation="MKMSIWTPPRLLELAGRSLLRDQALAMSTLEELPTELFPPLFMEA FT FSRRRCEALKLMVQSWPFRRLPLRPLIKMPCLEAFQAVLDGLDALLNLGVRPRRWKLQV FT LDLQDVCENFWMVWSEAMAHGCFLNAKRNKKPVEDCPRMRGRQPLTVFVELWLKNRTLD FT EYLTCLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKWVLPI FT LTQFTPYLGHMRNLQKLILSHMDVSRYVSPEQKKEIVTQFTTQFLKLRCLQKLYMNSVS FT FLEGHLDQLLSCLKTSLKFLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIRLTNYSL FT VPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPICMATLEN FT LLSHTIILKNLCVELYPAPRESYGADGTLCWSRFAQIRAELMNRVRDLRHPKRILFCTD FT YCPDCGNRSFYDLEADQYCC" FT CDS join(12918865..12919151,12919548..12920126, FT 12921076..12921634) FT /gene="PRAMEF2" FT /locus_tag="RP5-845O24.5-001" FT /standard_name="OTTHUMP00000001965" FT /product="PRAME family member 2" FT /note="match: proteins: Sw:O95521 Sw:P78395 Tr:Q8C9W1 FT Tr:Q99MW3" FT /protein_id="CAA17878.1" FT /translation="MSIQAPPRLLELAGQSLLRDQALSISAMEELPRVLYLPLFREAFS FT RRHFQTLTVMVQAWPFTCLPLVSLMKTLHLEPLKALLEGLHMLLTQKDRPRRWKLQVLD FT LRDVDENFWARWPGAWALSCFPEAMSKRQTAEDCPRTGEHQPLKVFIDICLKEIPQDEC FT LRYLFQWVYQRRGLVHLCCSKLVNYLTPIKYLRKSLKIIYINSIGELEIHNTCWPHLIR FT KLYCYLKEMKTLCKLVFSRCHHYTSDNELEGWLVTRFTSVFLRLEHLQLLKIKLITFFS FT GHLEQLIRCLQNPLENLELTCGNLLEEDLKCLSQFPSLGYLKHLNLSYVLLFRISLEPL FT GALLEKIAASLETLVLEGCQIHYSQLSAILPGLSCCSQLTTFYFGSNCMSIDALKDLLR FT HTSGLSKLSLETYPAPEESLNSLVRVNWEIFTPLRAELMCTLREFRQPKRIFIGPTPCP FT SCGSSPSEELELHLCC" FT mRNA join(12916941..12917002,12918840..12919151, FT 12919548..12920126,12921076..12921764) FT /gene="PRAMEF2" FT /locus_tag="RP5-845O24.5-001" FT /product="PRAME family member 2" FT /note="match: cDNAs: Em:AL049674.1" FT /note="match: ESTs: Em:AA448412.1" FT mRNA complement(join(12907261..12908323,12908534..12908578)) FT /gene="HNRNPCL1" FT /locus_tag="RP5-845O24.4-001" FT /product="heterogeneous nuclear ribonucleoprotein C-like 1" FT /note="match: cDNAs: Em:BC002696.2" FT /note="match: ESTs: Em:BX283835.1" FT CDS complement(12907261..12908142) FT /gene="HNRNPCL1" FT /locus_tag="RP5-845O24.4-001" FT /standard_name="OTTHUMP00000001928" FT /product="heterogeneous nuclear ribonucleoprotein C-like 1" FT /note="match: proteins: Sw:O77768 Sw:P07910 Sw:Q9Z204 FT Tr:Q6PKD2" FT /protein_id="CAA17879.1" FT /translation="MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAG FT CSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEM FT YGSSFDLDYGFQRDYYDGMYSFPARVPPPPPIALAVVPSKRQRLSGNTSRRGKSGFNSK FT SGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEQSKQEVEVKNAKSEE FT EQSSSSMKKDETHVKMESEGGAEDSAEEGDPLDDDVNEDQGDDQLELIKDDEKEAEEGE FT DDRDSTNGQDDS" FT CDS complement(join(12898323..12898812,12899955..12900531, FT 12900928..12901210)) FT /pseudo FT /locus_tag="RP5-845O24.3-001" FT /product="pseudogene similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: proteins: Sw:O60809 Sw:O60813 Sw:O95521 FT Sw:O95522 Sw:P78395 Tr:Q8CE24" FT mRNA complement(join(<12884805..12885361,12887108..12887689, FT 12888357..12888664,12891210..12891264)) FT /gene="PRAMEF11" FT /locus_tag="RP5-845O24.2-001" FT /product="PRAME family member 11" FT /note="match: cDNAs: Em:AL049680.1" FT CDS complement(join(<12884805..12885361,12887108..12887689, FT 12888357..12888523)) FT /gene="PRAMEF11" FT /locus_tag="RP5-845O24.2-001" FT /standard_name="OTTHUMP00000001927" FT /product="PRAME family member 11" FT /note="match: proteins: Sw:P78395" FT /protein_id="CAA17880.1" FT /translation="MEAFSRRRCEALKLMVQAWPFRRLPLRPLIKMPCLEAFQAVLDGL FT DALLTQGVRPRRWKLQVLDLQDVCENFWMVWSEAMAHGCFLNAKRNKTPVQDCPRMRER FT QPLTVFVELWLKNRTLDEYLTCLLLWVKQRRDLLHLCCKKLKILGMPFRNIRSILKMVN FT LDCIQEVEVNCKWILPILTQFTPYLGHLRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTT FT QFLKLRCLQKLYMNSVSFLEGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSIS FT QLKTLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFEL FT NTFSFCGNPICMATLENLLSHTIILKNLCLELYPAPQESYGADGTLCWSRFAQIRAELM FT KKVRHLRHPKRILFCTDNCPDHGDRSFYDLEADQYC" FT mRNA complement(join(12882549..12882802,12882899..12883022)) FT /locus_tag="RP5-845O24.8-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA397525.1" FT polyA_site 12856634 FT polyA_signal 12856612..12856617 FT misc_feature 12975202..13019851 FT /note="annotated region of clone" FT mRNA join(<12977513..12977799,12978182..12978757, FT 12979672..>12980233) FT /gene="PRAMEF7" FT /locus_tag="RP11-450I1.1-001" FT /product="PRAME family member 7" FT CDS join(12977513..12977799,12978182..12978757, FT 12979672..12980233) FT /gene="PRAMEF7" FT /locus_tag="RP11-450I1.1-001" FT /standard_name="OTTHUMP00000001963" FT /product="PRAME family member 7" FT /note="match: proteins: Sw:O95522 Sw:P78395 Sw:P78395" FT /protein_id="CAH73922.1" FT /translation="MSIRAPPRLLELARQRLLRDQALAISTMEELPRELFPTLFMEAFS FT RRRCETLKTMVQAWPFTRLPLGSLMKSPHLESLKSVLEGVDVLLTQEVRPRQSKLQVLD FT LRNVDENFCDIFSGATASFPEALSQKQTADNCPGTGRQQPFMVFIDLCLKNRTLDECLT FT HLLEWGKQRKGLLHVCCKELQVFGMPIHSIIEVLNMVELDCIQEVEVCCPWELSTLVKF FT APYLGQMRNLRKLVLFNIRASACIPPDNKGQFIARFTSQFLKLDYFQNLSMHSVSFLEG FT HLDQLLRCLQASLEMVVMTDCLLSESDLKHLSWCPSIRQLKELDLRGVTLTHFSPEPLT FT GLLEQVVATLQTLDLEDCGIMDSQLSAILPVLSRCSQLSTFSFCGNLISMAALENLLRH FT TVGLSKLSLELYPAPLESYDTQGALCWGRFAELGAELMKTPRDLRQPKIIVFCTVPCPR FT CGIRASYDLEPSHCLC" FT CDS join(12985990..12986569,12987523..12988081) FT /pseudo FT /locus_tag="RP11-450I1.2-001" FT /product="pseudogene similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O60811 FT Sw:O95521 Sw:O95521 Sw:O95522 Sw:P78395 Sw:P78395" FT mRNA complement(join(<12998505..12999066,13000814..13001395, FT 13002062..>13002348)) FT /gene="PRAMEF6" FT /locus_tag="RP11-450I1.3-001" FT /product="PRAME family member 6" FT CDS complement(join(12998505..12999066,13000814..13001395, FT 13002062..13002348)) FT /gene="PRAMEF6" FT /locus_tag="RP11-450I1.3-001" FT /standard_name="OTTHUMP00000001964" FT /product="PRAME family member 6" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O60813 FT Sw:O95522 Sw:P78395 Sw:P78395" FT /protein_id="CAH73924.1" FT /translation="MSIRTPPRLLELAGRSLLRDQALAMSTLEELPTELFPPLFMEAFS FT RRRCEALKLMVQAWPFRRLPLRPLIKMPCLEAFQAVLDGLDALLTQGVHPRRWKLQVLD FT LQDVCENFWMVWSEAMARGCFLNAKRNKTPVQDCPRMRGQQPLTVFVELWLKNRTLDEY FT LTCLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKWVLPILT FT QFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTTQFLKLCCLQKLSMNSVSFL FT EGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIRLTNYSLVP FT LQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPISMATLENLL FT SHTIILKNLCVELYPAPRESYDADGTLCWSRFAQIRAELMKRVRDLRHPKRILFCTDCC FT PDCGNRSFYDLEADQCCC" FT CDS complement(join(13012966..13013473,13014497..13015072, FT 13015469..13015755)) FT /pseudo FT /locus_tag="RP11-450I1.4-001" FT /product="pseudogene similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O60813 FT Sw:O95521 Sw:O95521 Sw:O95522 Sw:P78395 Sw:P78395" FT misc_feature 13017851 FT /note="Clone_right_end: RP11-450I1" FT misc_feature 13019852..13052998 FT /note="annotated region of clone" FT mRNA join(<13035543..13035835,13036222..13036800, FT 13037808..>13038381) FT /locus_tag="WI2-3308P17.1-001" FT /product="novel protein similar to preferentially expressed FT antigen in melanoma (PRAME)" FT CDS join(13035543..13035835,13036222..13036800, FT 13037808..13038381) FT /locus_tag="WI2-3308P17.1-001" FT /standard_name="OTTHUMP00000083450" FT /product="novel protein similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:Q5TYW8 FT Sw:Q5VWM5 Tr:Q5SWL8 Tr:Q5VWM3" FT /protein_id="CAM45848.1" FT /translation="MRMSLQAPRRLLELAGQSLLGDQALAISILDELPRELFPPLFVEA FT FTSRRCEVLKVMVQAWPFPCLPLGSLMKTPDLEILHYVVDGIDCLLAQKVRPRRWKLQV FT LELRDVDENFWTIWSGARPLSCSPEAMSKRQTVEDCPRTGEKQPLKVFMDVCLKEKFMD FT EDLSFFSGWVQHRRGSVHLCCTKVVNYSMSILNFRNILETVYPDSIQVLEIWNMCWPCM FT IVEFSRYLSQMRNLRKLFISDGCRYLLSSDSQEQLVAEFSSVLLRLEYLQMLYVRRVCF FT FRGHLDQLIRCLRSPLETLALTYGFLEKVDLKCLPRYPSLSQLKQLNLSHGALRFIRLE FT PLRALLEKVAATLQTLFLVDCGIRDSKLRVILPALSCCSNLTTFCFHGNDTSMDGLKDL FT LRHTGRLSNLSLETYPAPRESLDDRGRVISELLTPLQAELMRILREVREPKRIFFGPVS FT CPCCGTSPTEQLEFNFCLWGRPA" FT misc_feature 13049162 FT /note="Clone_right_end: WI2-3308P17" FT mRNA complement(13052394..>13052998) FT /locus_tag="WI2-3308P17.2-001" FT /product="novel protein similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: cDNAs: Em:AK124292.1 Em:AL049680.1 FT Em:AL049681.1" FT CDS complement(13052726..>13052998) FT /codon_start=1 FT /locus_tag="WI2-3308P17.2-001" FT /standard_name="OTTHUMP00000083451" FT /product="novel protein similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: proteins: Sw:O60810 Sw:Q5TYX0 Sw:Q5VWM5 FT Tr:Q5VT98" FT /protein_id="CAM45849.1" FT /translation="GNPISMATLENLLSHTIILKNLCVEVYPAPQESYGADGTLCWSRF FT AQIRAELMNRVRDLRHPKRIFFCIDNCPDCGNRSFYDLEADQYCC" FT gap 13052999..13102998 FT /estimated_length=50000 FT misc_feature 13102999..13191235 FT /note="annotated region of clone" FT misc_feature 13104998 FT /note="Clone_right_end: RP11-219C24" FT CDS join(13140456..13140742,13141129..13141707, FT 13144439..13145000) FT /pseudo FT /locus_tag="RP13-221M14.1-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60810 Sw:O60811 Sw:O60813 FT Sw:O95521 Sw:O95522" FT /db_xref="PSEUDO:CAI17288.1" FT mRNA join(13146777..13146900,13146997..13147256) FT /locus_tag="RP13-221M14.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA397525.1 Em:AA399055.1" FT mRNA complement(join(13162851..13163233,13164185..13164468)) FT /locus_tag="RP13-221M14.3-002" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: ESTs: Em:DR731272.1" FT mRNA complement(join(13162645..13163233,13164185..13164760, FT 13165157..13165443)) FT /locus_tag="RP13-221M14.3-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT CDS complement(join(13171871..13172449,13172846..13173157)) FT /pseudo FT /locus_tag="RP13-221M14.4-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60809 Sw:O60811 Sw:O95521 FT Sw:O95522" FT CDS complement(13182991..13183872) FT /pseudo FT /locus_tag="RP13-221M14.5-001" FT /product="heterogeneous nuclear ribonucleoprotein C (C1/C2) FT (HNRPC) pseudogene" FT /note="match: proteins: Sw:O60812 Sw:P07910 Sw:Q9Z204 FT Tr:Q6PKD2 Tr:Q8AVP9 Tr:Q9Z204" FT /db_xref="PSEUDO:CAI17291.1" FT misc_feature 13191235 FT /note="Clone_right_end: RP13-221M14" FT misc_feature complement(13191236..13219912) FT /note="annotated region of clone" FT CDS complement(join(13216688..13217249,13219000..>13219581)) FT /codon_start=2 FT /locus_tag="WI2-2994D6.2-001" FT /standard_name="OTTHUMP00000083463" FT /product="novel protein similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: proteins: Sw:O60810 Sw:O60813 Sw:Q5TYX0 FT Sw:Q5VWM5 Sw:Q5VXH4 Tr:Q5VT98" FT /protein_id="CAM12845.1" FT /translation="RWKLQVLDLQDVCENFWMVWSEAMARGCFLNAKRNKKPVQDCPRM FT RGRQPLTVFVELWLKNRTLDEHLTCLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILK FT MVNLDCIQEVEVNCKWVLPILTQFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQ FT FTTQFLKLHCLQKLYMNSVSFLEGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCP FT SISQLKTLDLSGIRLTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRC FT FELNTFSFCGNPISMATLENLLSHTIILKNLCLELYPAPRESYGADGTLCWSRFTQIRA FT ELMKRVRDLRHPKRILFGTDYCPDCGNRSFYDLEADQYCC" FT mRNA complement(join(13216356..13217249,13219000..>13219581)) FT /locus_tag="WI2-2994D6.2-001" FT /product="novel protein similar to preferentially expressed FT antigen in melanoma (PRAME)" FT /note="match: cDNAs: Em:AK124292.1 Em:AL049680.1 FT Em:AL049681.1" FT CDS join(13196270..13196556,13196953..13197528, FT 13198479..13199067) FT /pseudo FT /locus_tag="WI2-2994D6.1-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60809 Sw:O60811 Sw:O95521 FT Tr:Q5VTA0 Tr:Q5VWM1 Tr:Q5VWM6" FT misc_feature complement(13191236) FT /note="Clone_left_end: WI2-2994D6" FT gap 13219913..13319912 FT /estimated_length=100000 FT misc_feature 13319913..13374571 FT /note="annotated region of clone" FT misc_feature 13319913 FT /note="Clone_left_end: RP11-248D7" FT mRNA complement(join(13328196..13329406,13330414..13330992, FT 13331379..13331692)) FT /gene="PRAMEF3" FT /locus_tag="RP11-248D7.1-001" FT /product="PRAME family member 3" FT /note="match: ESTs: Em:BM450010.1 Em:BM454876.1 FT Em:BQ071960.1 Em:BU171582.1" FT /note="match: cDNAs: Em:AK125568.1 Em:AL049674.1 FT Em:AL049682.1 Em:AL049686.1" FT CDS complement(join(13328833..13329406,13330414..13330992, FT 13331379..13331665)) FT /gene="PRAMEF3" FT /locus_tag="RP11-248D7.1-001" FT /standard_name="OTTHUMP00000011037" FT /product="PRAME family member 3" FT /note="match: proteins: Sw:O60809 Sw:O60811 Sw:O95521 FT Sw:O95522" FT /protein_id="CAH71686.1" FT /translation="MSLQAPRRLLELAGQSLLGDQALAISILDELPRELFPPLFVEAFT FT SRRCEVLKVMVQAWPFPCLPLGSLMKTPDLEILHYVVDGIDCLLAQKVRPRRRKLQVLE FT LRDVDENFWTIWSGARPLSCSPEAMSKRQTVEDCPRTGEKQPLKVFMDVCLKEKFMDED FT LSFFSGWVQHRRGSVHLCCTKVVNYSMSILNFRNILETVYPDSIQVLEIWNMCWPCMIV FT EFIRYLSQMRNLRKLFISDGCRYLLSSDSQEQLVAEFSSVLLRLEYLQMLYVRRVCFFR FT GHLDQLIRCLRSPLETLALTYGFLEKVDLKCLPRYPSLSQLKQLNLSHGALRFIRLEPL FT RALLEKVAATLQTLFLVDCGIRDSKLRVILPALSCCSNLTTFCFHGNDTSMDGLKDLLR FT HTGRLSNLSLETYPAPRESLDDRGRVISELLTPLQAELMRILREVREPKRIFFGPVSCP FT CCGTSPTEQLEFNFCLWGRPA" FT CDS join(13351482..13351768,13352165..13352740, FT 13353765..13354323) FT /pseudo FT /locus_tag="RP11-248D7.2-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O60813 FT Sw:O95521 Sw:O95522" FT mRNA join(13359819..13359896,13364869..13365177, FT 13365844..13366425,13368172..13369057) FT /gene="PRAMEF5" FT /locus_tag="RP11-248D7.3-001" FT /product="PRAME family member 5" FT /note="match: ESTs: Em:BM450010.1 Em:BM454876.1 FT Em:BQ071960.1 Em:BU171582.1" FT /note="match: cDNAs: Em:AK124292.1 Em:AL049680.1 FT Em:AL049681.1 Em:AL049682.1" FT CDS join(13364891..13365177,13365844..13366425, FT 13368172..13368733) FT /gene="PRAMEF5" FT /locus_tag="RP11-248D7.3-001" FT /standard_name="OTTHUMP00000011089" FT /product="PRAME family member 5" FT /note="match: proteins: Sw:O60810 Sw:O60813 Sw:O95522" FT /protein_id="CAH71689.1" FT /translation="MSIRTPPRLLELAGRSLLRDQALAMSTLEELPTELFPPLFMEAFS FT RRRCEALKLMVQAWPFRRLPLRPLIKMPCLEAFQAVLDGLDALLTQGVHPRRWKLQVLD FT LQDVCENFWMVWSEAMAHGCFLNAKRNKKPVQDCPRMRGQQPLTVFVELWLKNRTLDEY FT LTCLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKWVLPILT FT QFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTTQFLKLCCLQKLSMNSVSFL FT EGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIRLTNYSLVP FT LQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPISMATLENLL FT SHTIILKNLCVELYPAPRESYDADGTLCWSRFAQIRAELMKRVRDLRHPKRILFCTDCC FT PDCGNRSFYDLEADQCCC" FT misc_feature 13372572 FT /note="Clone_left_end: RP11-219C24" FT misc_feature complement(13374572..13557162) FT /note="annotated region of clone" FT mRNA join(13521963..13522259,13523737..13524315, FT 13526312..13526943) FT /gene="PRAMEF21" FT /locus_tag="RP11-219C24.1-001" FT /product="PRAME family member 21" FT /note="match: ESTs: Em:BQ212074.1 Em:BU184045.1 FT Em:BX325537.1 Em:BX347688.1" FT /note="match: cDNAs: Em:AK124292.1 Em:AK125568.1 FT Em:AL049674.1 Em:AL049680.1 Em:AL049681.1" FT CDS join(13521973..13522259,13523737..13524315, FT 13526312..13526873) FT /gene="PRAMEF21" FT /locus_tag="RP11-219C24.1-001" FT /standard_name="OTTHUMP00000002951" FT /product="PRAME family member 21" FT /note="match: proteins: Sw:O60810 Sw:O60813 Sw:O95522" FT /protein_id="CAH71444.1" FT /translation="MSIRTPPRLLELAGRSLLRDEALAISTLEELPTELFPPLFMEAFS FT RRHCEALKLMVQAWPFLRLPLGSLMKRPCPETFQAVLDGLDALLTHRVRLRRWKLQVLD FT LQDVSENFWMVWSEAMARRCLPNAMMNRKPVQDCPRMRGQQPLTVFIDLCLKNRTLDEY FT FTCLFLWVKQREGLVHLCCKKLKMLGMLFHNIRNILKTVNLDCIQEVEVNCNWTLPVLA FT EFTPYLGQMRNLRKLVLSDIDSRYISPEQKKEFVTQFTTQFLKLRCLQKLYMNSVSFLE FT GHLDQMLSCLKTSLNILAITNCVLLESDLKHLSKYPSIGQLKTLDLSGTRLANFSLVPL FT QVLLEKVAATLEYLDLDDCGIVDSQVNAILPALSRCFELTTFSFRGNPISTATLENLLC FT HTIRLNNLCLELYPAPRESYDVRGIVCRSRFAQLGAELMGRVRALREPERILFCTDYCP FT QCGNRSLYDLEVDRCCC" FT misc_feature complement(13497496..13497525) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(13495254..13495570,13495967..13496545, FT 13497570..13498260) FT /gene="PRAMEF16" FT /locus_tag="RP11-219C24.2-001" FT /product="PRAME family member 16" FT /note="match: ESTs: Em:BI825435.1 Em:BM051389.1 FT Em:BQ069781.1 Em:BX341396.1" FT /note="match: cDNAs: Em:AK125568.1 Em:AL049674.1 FT Em:AL049682.1 Em:AL049686.1" FT CDS join(13495284..13495570,13495967..13496545, FT 13497570..13498128) FT /gene="PRAMEF16" FT /locus_tag="RP11-219C24.2-001" FT /standard_name="OTTHUMP00000002960" FT /product="PRAME family member 16" FT /note="match: proteins: Sw:O60809 Sw:O60811 Sw:O95521 FT Sw:O95522" FT /protein_id="CAH71445.1" FT /translation="MSLQSPSRLLELAGQSLLRNQFLTIFILDELPREVFPLMFMEASS FT MRHFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLKGLDTLLAQKLRPRRWKLQVLD FT LRDVDGNFWTIWSGARALSCSPEAMRKRQTVEDYPRTGEHQPLKVFIDLCQKESTLDEC FT LSYLCRWIHYRRGLVHLCCNKVQNYSMPTSSFRNLLKRVYPDSIQELEIKRKCSLNKTG FT KFAPYLSQMSNLRKLFLAFGYDDELYVSGQQQFVPDLDCPFLCLYYPQMLYIRKISNIK FT EHLEHLLRCLKNPLGTFIFCHAYLADQDMECLSQYPSLSQLKELHLIHILMWTTNLEPL FT GALLEKVAATLEILTLKDCQIQDSQLRVLLPALSRCSQLTTFYFRGNETSTNALKDLLC FT HTGGLSKLGLELYPAPLECLDNRGHVNWEILAPIRAELMCTLREVRQPKRIFFGPIPCP FT SCGSWPSEKVDFHLCS" FT mRNA complement(join(13474053..13475262,13476271..13476849, FT 13477236..13477569)) FT /gene="PRAMEF18" FT /locus_tag="RP11-219C24.3-001" FT /product="PRAME family member 18" FT CDS complement(join(13474689..13475262,13476271..13476849, FT 13477236..13477522)) FT /gene="PRAMEF18" FT /locus_tag="RP11-219C24.3-001" FT /standard_name="OTTHUMP00000002959" FT /product="PRAME family member 18" FT /note="match: proteins: Sw:O60809 Sw:O60811 Sw:O95521" FT /protein_id="CAH71446.1" FT /translation="MSFQAPRRLLELAGQSLLRDQALAISVLDELPRELFPRLFVEAFT FT SRRCEVLKVMVQAWPFPCLPLGSLMKTPDLEILHYVVDGIDCLLAQKVRPRRWKLQVLE FT MRDVDENFWTIWSGARPLSCSPEAMSKRQTVEDCPRTGEKQPLKVFMDVCLKEKSVDED FT LSFFSGWVQHRRRSVHLCCTKVVNYSMNILNFRNILETVYPDSIQVLEIWNMCWPCMVA FT EVSRYLSQMKNLRKLFISDGCGYLPSFESQGQLVAEFSSVFLRLEYLQMLYMRRIRFFE FT GYLDQLIRCLKSPLETLALTYGSLDEEDLKCLPWYPSLSQLKQLNLSHGTLRFIRLEPL FT RALLEKVAATLQTLFLVDCGIGDSKLRVILPALSRCSNLTTFCFHGNDTSMDGLKDLLR FT HTGRLSNLSLETYPAPRESLDNRGRVISELLTPLQAELMRILREVREPNRIFFGPVSCP FT CCGMSPTEQLEFNFCLRGRPA" FT mRNA complement(join(13447414..13448608,13449560..13450138, FT 13450550..13450861,13452579..13452656)) FT /gene="PRAMEF13" FT /locus_tag="RP11-219C24.4-001" FT /product="PRAME family member 13" FT /note="match: ESTs: Em:AA448415.1 Em:AW182053.1 FT Em:BM473529.1 Em:BQ069781.1" FT /note="match: cDNAs: Em:AK125568.1 Em:AL049674.1 FT Em:AL049686.1" FT CDS complement(join(13448050..13448608,13449560..13450138, FT 13450550..13450836)) FT /gene="PRAMEF13" FT /locus_tag="RP11-219C24.4-001" FT /standard_name="OTTHUMP00000009723" FT /product="PRAME family member 13" FT /note="match: proteins: Sw:O60811 Sw:O95521" FT /protein_id="CAH71447.1" FT /translation="MSIQAPPRLLELAGQSLLRDQALSISAMEELPRVLYLPLFMEAFR FT RRHFQTLTVMVQAWPFTCLPLGSLMKTLHLETLKALLEGLHMLLTQKDRPRRWKLQVLD FT LRDVDENFWARWPGAWALSCFPETMSKRQTAEDCPRMGEHQPLKVFIDICLKEIPQDEC FT LRYLFQWVYQRRGLVHLCCSKLVNYLTPIKHLRKSLKIIYLNSIQQLEIRNMSWPRLIR FT KLRCYLKEMKNLRKLVFSRCHHSMSDNELEGRLVTKFSSVFLRLEHLQLLKIKLITFFS FT GHLEQLIRCLQNPLENLELTYGYLLEEDMKCLSQYPSLGYLKHLNLSYVLLFRISLEPL FT GALLEKIAASLETLILEGCQIHYSQLSAILPGLSHCSQLTTFYFGRNCMSMGALKDLLR FT HTSGLSKLSLETYPAPEESLNSLVRVDWEIFALLRAELMCTLREVRQPKRIFIGPTPCP FT SCGSSPSEELELHLCC" FT mRNA join(13429634..13429757,13429854..13430107) FT /locus_tag="RP11-219C24.10-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA397525.1 Em:AA399055.1" FT polyA_site 13428193 FT polyA_signal 13428172..13428177 FT CDS join(13424003..13424295,13424967..13425548, FT 13427298..13427859) FT /gene="PRAMEF9" FT /locus_tag="RP11-219C24.5-001" FT /standard_name="OTTHUMP00000009724" FT /product="PRAME family member 9" FT /note="match: proteins: Sw:O60810 Sw:O60813 Sw:O95522 FT Sw:P78395" FT /protein_id="CAH71448.1" FT /translation="MKMSIRTPPRLLELAGRSLLRDQALAMSTLEELPTELFPPLFMEA FT FSRRRCEALKLMVQAWPFRRLPLRPLIKMPCLEAFQAVLDGLDALLTQGVRPRRWKLQV FT LDLQDVCENFWMVWSEAMAHGCFLNAKRNKKPVQDCPRMRGRQPLTVFVELWLKNRTLD FT EYLTYLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKWVLPI FT LTQFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTTQFLKLRCLQKLYMNSVS FT FLEGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIRLTNYSL FT VPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPICMATLEN FT LLSHTIILKNLCVELYPAPRESYGADGTLCWSRFAQIRAELMNRVRDLRHPKRILFCTD FT YCPDCGNRSFYDLEADQYCC" FT mRNA join(13421176..13421253,13423987..13424295, FT 13424967..13425548,13427298..13428191) FT /gene="PRAMEF9" FT /locus_tag="RP11-219C24.5-001" FT /product="PRAME family member 9" FT /note="match: ESTs: Em:BG197761.1 Em:BM473529.1 FT Em:BQ071960.1 Em:BU156741.1 Em:BX341181.1" FT /note="match: cDNAs: Em:AK124292.1 Em:AL049680.1 FT Em:AL049681.1 Em:AL049682.1" FT CDS join(13411551..13411837,13412234..13412812, FT 13413924..13414482) FT /pseudo FT /locus_tag="RP11-219C24.6-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O95521 FT Sw:O95522" FT mRNA complement(join(13386646..13387543,13388458..13389033, FT 13389416..13389727,13390708..13390765)) FT /gene="PRAMEF8" FT /locus_tag="RP11-219C24.7-001" FT /product="PRAME family member 8" FT /note="match: ESTs: Em:AA589267.1 Em:AI596993.1 FT Em:BQ745661.1 Em:CF174911.1" FT /note="match: cDNAs: Em:AK124292.1 Em:AK125568.1 FT Em:AL049674.1 Em:AL049680.1 Em:AL049681.1 Em:AL049686.1" FT CDS complement(join(13386982..13387543,13388458..13389033, FT 13389416..13389702)) FT /gene="PRAMEF8" FT /locus_tag="RP11-219C24.7-001" FT /standard_name="OTTHUMP00000009725" FT /product="PRAME family member 8" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O60813 FT Sw:O95521 Sw:O95522 Sw:P78395 Tr:Q9D2F1" FT /protein_id="CAH71450.1" FT /translation="MSIRAPPRLLELARQRLLRDQALAISTMEELPRELFPTLFMEAFS FT RRRCETLKTMVQAWPFTRLPLGSLMKSPHLESLKSVLEGVDVLLTQEVRPRQSKLQVLD FT LRNVDENFCDIFSGATASFPEALSQKQTADNCPGTGRQQPFMVFIDLCLKNRTLDECLT FT HLLEWGKQRKGLLHVCCQELQVFGMPIHSIIEVLNMVELDCIQEVEVCCPWELSTLVKF FT APYLGQMRNLRKLVLFNIRASACIPPDNKGQFIARFTSQFLKLDYFQNLSMHSVSFLEG FT HLDQLLRCLQASLEMVVMTDCLLSESDLKHLSWCPSIRQLKELDLRGVTLTHFSPEPLT FT GLLEQVVATLQTLDLEDCGIMDSQLSAILPVLSRCSQLSTFSFCGNLISMAALENLLRH FT TVGLSKLSLELYPAPLESYDTQGALCWGRFAELGAELMKTLRDLRQPKIIVFCTVPCPR FT CGIRASYDLEPSHCLC" FT polyA_signal complement(13386663..13386668) FT polyA_site complement(13386646) FT mRNA complement(join(13385417..13385672,13385781..13385903)) FT /locus_tag="RP11-219C24.9-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA397525.1" FT CDS complement(join(13379149..13379721,13380743..13381237)) FT /pseudo FT /locus_tag="RP11-219C24.8-008" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60809 Sw:O60811 Sw:O60813 FT Sw:O95521" FT misc_feature complement(13374572) FT /note="Clone_left_end: RP11-219C24" FT gap 13557163..13607162 FT /estimated_length=50000 FT misc_feature complement(13607163..13648678) FT /note="annotated region of clone" FT CDS join(13644800..13645092,13645764..13646345, FT 13648095..13648656) FT /gene="PRAMEF15" FT /locus_tag="XX-FW84067D5.3-001" FT /standard_name="OTTHUMP00000009645" FT /product="PRAME family member 15" FT /note="match: proteins: Sw:O60810 Sw:O60811 Sw:O60813 FT Sw:O95522 Sw:P78395" FT /protein_id="CAI23593.1" FT /translation="MKMSIRTPPRLLELAGRSLLRDQALAMSTLEELPTELFPPLFMEA FT FSRRRCEALKLMVQAWPFRRLPLRPLIKMPCLEAFQAVLDGLDALLTQGVRPRRWKLQV FT LDLQDVCENFWMVWSEAMAHGCFLNAKRNKKPVQDCPRMRGRQPLTVFVELWLKNRTLD FT EYLTYLLLWVKQRKDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKWVLPI FT LTQFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTTQFLKLRCLQKLYMNSVS FT FLEGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIRLTNYSL FT VPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPICMATLEN FT LLSHTIILKNLCVELYPAPRESYGADGTLCWSRFAQIRAELMNRVRDLRHPKRILFCTD FT YCPDCGNRSFYDLEADQYCC" FT mRNA join(13641973..13642050,13644800..13645092, FT 13645764..13646345,13648095..13648678, FT AL603890.14:25844..26153) FT /gene="PRAMEF15" FT /locus_tag="XX-FW84067D5.3-001" FT /product="PRAME family member 15" FT /note="match: cDNAs: Em:AK124292.1 Em:AL049680.1 FT Em:AL049681.1" FT /note="match: ESTs: Em:BG196260.1 Em:BG197761.1 FT Em:BM454876.1 Em:BM473529.1 Em:BX401060.1" FT misc_feature complement(13633005) FT /note="Clone_right_end: RP11-584P2" FT CDS join(13632348..13632634,13633031..13633609, FT 13634721..13635279) FT /pseudo FT /locus_tag="XX-FW84067D5.2-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O60811 FT Sw:O95521 Sw:O95522" FT CDS complement(join(13607745..13608328,13609243..13609818, FT 13610201..13610487)) FT /pseudo FT /locus_tag="XX-FW84067D5.1-001" FT /product="preferentially expressed antigen in melanoma FT (PRAME) pseudogene" FT /note="match: proteins: Sw:O60810 Sw:O60811 Sw:O60813 FT Sw:O95522 Tr:Q9D2F1" FT misc_feature complement(13607163) FT /note="Clone_left_end: WI2-84067D5" FT misc_feature 13648679..13711641 FT /note="annotated region of clone" FT mRNA join(complement(BX470067.4:6629..6706), FT complement(BX470067.4:3587..3879), FT complement(BX470067.4:2334..2915), FT complement(BX470067.4:1..584),13648679..13648988) FT /gene="PRAMEF15" FT /locus_tag="XX-FW84067D5.3-001" FT /product="PRAME family member 15" FT /note="match: ESTs: Em:BG196260.1 Em:BG197761.1 FT Em:BM454876.1 Em:BM473529.1 Em:BX401060.1" FT /note="match: cDNAs: Em:AK124292.1 Em:AL049680.1 FT Em:AL049681.1" FT mRNA join(13650431..13650554,13650651..13650910) FT /locus_tag="RP11-584P2.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA397525.1 Em:AA399055.1" FT CDS complement(join(13668905..13669463,13670559..13670993, FT 13671405..13671691)) FT /gene="PRAMEF14" FT /locus_tag="RP11-584P2.2-001" FT /standard_name="OTTHUMP00000009641" FT /product="PRAME family member 14" FT /note="match: proteins: Sw:O60809 Sw:O60811 Sw:O95521" FT /protein_id="CAI16057.1" FT /translation="MSIQAPPRLLELAGQSLLRDQALSISAMEELPRVLYLPLFMEAFR FT RRHFQTLTVMVQAWPFTCLPLGSLMKTLHLETLKALLEGLHMLLTQKDRPRRWKLQVLD FT LRDVDENFWARWPGAWALSCFPETMSKRQTAEDCPRMGEHQPLKVFIDICLKEIPQDEC FT LRYLFQWVYQRRGLVHLCCSKLVNYLTPIKHLRKSLKIIYLNSIQQLEIRNMSWPRLIR FT KLRCYLKEMKNLRKLVFSRCLQNPLENLELTYGYLLEEDMKCLSQYPSLGYLKHLNLSY FT VLLFRISLEPLGALLEKIAASLETLILEGCQIHYSQLSAILPGLSHCSQLTTFYFGRNC FT MSMGALKDLLCHTSGLSKLSLETYPAPEESLNSLVRVDWEIFALLRAELMCTLREVRQP FT KRIFIGPTPCPSCGSSPSEELELHLCC" FT mRNA complement(join(13668269..13669463,13670559..13670993, FT 13671405..13671796,13673434..13673511)) FT /gene="PRAMEF14" FT /locus_tag="RP11-584P2.2-001" FT /product="PRAME family member 14" FT /note="match: ESTs: Em:AA448415.1 Em:AA813530.1 FT Em:BM473529.1 Em:BQ888797.1 Em:BQ896252.1 Em:BU169021.1 FT Em:BX092416.1" FT /note="match: cDNAs: Em:AK125568.1 Em:AL049674.1 FT Em:AL049686.1" FT misc_feature 13683799 FT /note="Clone_left_end: RP11-133N1" FT mRNA complement(join(13694889..13696098,13697107..13697685, FT 13698072..13698405)) FT /gene="PRAMEF19" FT /locus_tag="RP11-584P2.3-001" FT /product="PRAME family member 19" FT /note="match: cDNAs: Em:AK124292.1 Em:AK125568.1 FT Em:AL049674.1 Em:AL049682.1 Em:AL049686.1" FT CDS complement(join(13695525..13696098,13697107..13697685, FT 13698072..13698151)) FT /gene="PRAMEF19" FT /locus_tag="RP11-584P2.3-001" FT /standard_name="OTTHUMP00000009644" FT /product="PRAME family member 19" FT /note="match: proteins: Sw:O60809 Sw:O60810 Sw:O60811 FT Sw:O95521 Sw:O95522 Sw:P78395 Tr:Q9D2F1" FT /protein_id="CAI16059.1" FT /translation="MKTPDLEILHYVVDGIDCLLAQKVRPRRWKLQVLEMRDVDENFWT FT IWSGARPLSCSPEAMSKRQTVEDCPRTGEKQPLKVFMDVCLKEKSVDEDLSFFSGWVQH FT RRRSVHLCCTKVVNYSMNILNFRNILETVYPDSIQVLEIWNMCWPCMVAEVSRYLSQMK FT NLRKLFISDGCGYLPSFESQGQLVAEFSSVFLRLEYLQMLYMRRIRFFEGYLDQLIRCL FT KSPLETLALTYGSLDEEDLKCLPWYPSLSQLKQLNLSHGTLRFIRLEPLRALLEKVAAT FT LQTLFLVDCGIGYSKLRVILPALSRCSNLTTFCFHGNDTSMDGLKDLLRHTGRLSNLSL FT ETYPAPRESLDNRGRVISELLTPLQAELMRILREVREPNRIFFGPVSCPCCGMSPTEQL FT EFNFCLRGRPA" FT misc_feature 13711642..13811954 FT /note="annotated region of clone" FT mRNA join(13716088..13716404,13716801..13717379, FT 13718404..13719064) FT /gene="PRAMEF17" FT /locus_tag="RP11-133N1.1-001" FT /product="PRAME family member 17" FT CDS join(13716118..13716404,13716801..13717379, FT 13718404..13718962) FT /gene="PRAMEF17" FT /locus_tag="RP11-133N1.1-001" FT /standard_name="OTTHUMP00000009637" FT /product="PRAME family member 17" FT /protein_id="CAH70435.1" FT /translation="MSLQSPSRLLELAGQSLLRNQFLTIFILDELPREVFPLMFMEASS FT MRHFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLKGLDTLLAQKLRPRRWKLQVLD FT LRDVDGNFWTIWSGARALSCSPEAMSKRQTVEDYPRTGEHQPLKVFIDLCQKESTLDEC FT LSYLCRWIHYRRGLVHLCCNKVQNYSMPTSSFRNLLKRVYPDSIQELEIKRKCSLNKTG FT KFAPYLSQMSNLRKLFLAFGYDDELYVSGQQQFVPDLDCPFLCLYYPQMLYIRKISNIK FT EHLEHLLRCLKNPLGTFIFCHAYLADQDMECLSQYPSLSQLKELHLIHILMWTTNLEPL FT GALLEKVAATLEILTLKDCQIQDSQLRVLLPALSRCSQLTTFYFRGNETSTNALKDLLC FT HTGGLSKLGLELYPAPLECLDNRGHVNWEILAPIRAELMCTLREVRQPKRIFFGPIPCP FT SCGSWPSEKVDFHLCS" FT mRNA join(13736907..13737001,13742808..13743098, FT 13744597..13745175,13747172..13747803) FT /gene="PRAMEF20" FT /locus_tag="RP11-133N1.2-001" FT /product="PRAME family member 20" FT /note="match: cDNAs: Em:AK124292.1 Em:AL049680.1 FT Em:AL049681.1 Em:AL049682.1" FT mRNA complement(join(13801445..13802567, FT AL354712.18:29504..30589)) FT /gene="LRRC38" FT /locus_tag="RP4-597A16.1-001" FT /product="leucine rich repeat containing 38" FT /note="match: ESTs: Em:AA431938.1 Em:AA719301.1 FT Em:BE618324.1 Em:BG396264.1 Em:BG472142.1 Em:BM925485.1 FT Em:BX391678.1 Em:BX396881.1 Em:BX396882.1" FT /note="match: cDNAs: Em:AK038658.1 Em:AK045936.1 FT Em:AK078190.1 Em:BC016048.1" FT CDS complement(join(13802314..13802567, FT AL354712.18:29504..30134)) FT /gene="LRRC38" FT /locus_tag="RP4-597A16.1-001" FT /standard_name="OTTHUMP00000009643" FT /product="leucine rich repeat containing 38" FT /note="match: proteins: Tr:Q8BR15 Tr:Q96B32" FT /protein_id="CAH70436.1" FT /translation="MRPRAPACAAAALGLCSLLLLLAPGHACPAGCACTDPHTVDCRDR FT GLPSVPDPFPLDVRKLLVAGNRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSA FT KLVFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNN FT LRSLSVAALAALPALRSLRLDGNPWLCDCDFAHLFSWIQENASKLPKGLDEIQCSLPME FT SRRISLRELSEASFSECRFSLSLTDLCIIIFSGVAVSIAAIISSFFLATVVQCLQRCAP FT NKDAEDEDEDKDD" FT CDS join(13742812..13743098,13744597..13745175, FT 13747172..13747733) FT /gene="PRAMEF20" FT /locus_tag="RP11-133N1.2-001" FT /standard_name="OTTHUMP00000009638" FT /product="PRAME family member 20" FT /note="match: proteins: Sw:O60810 Sw:O60813 Sw:O95521 FT Sw:O95522 Sw:P78395" FT /protein_id="CAH70437.1" FT /translation="MSIRTPPRLLELAGRSLLRDEALAISTLEELPTELFPPLFMEAFS FT RRHCEALKLMVQAWPFLRLPLGSLMKRPCPETFQAVLDGLDALLTHRVRLRRWKLQVLD FT LQDVSENFWMVWSEAMARRCLPNAMMNRKPVQDCPRMRGQQPLTVFIDLCLKNRTLDEY FT FTCLFLWVKQREGLVHLCCKKLKMLGMLFHNIRNILKTVNLDCIQEVEVNCNWTLPVLA FT EFTPYLGQMRNLRKLVLSDIDSRYISPEQKKEFVTQFTTQFLKLRCLQKLYMNSVSFLE FT GHLDQMLSCLKTSLNILAITNCVLLESDLKHLSKYPSIGQLKTLDLSGTRLANFSLVPL FT QVLLEKVAATLEYLDLDDCGIVDSQVNAILPALSRCFELTTFSFRGNPISTATLENLLC FT HTIRLNNLCLELYPAPRESYDVRGIVCRSRFAQLGAELMGRVRALREPERILFCTDYCP FT QCGNRSLYDLEVDRCCC" FT misc_feature 13763292..13763302 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 13793248 FT /note="Clone_right_end: RP11-584P2" FT polyA_site complement(13801445) FT polyA_signal complement(13801461..13801466) FT polyA_signal complement(13801465..13801470) FT misc_feature 13807955 FT /note="Clone_left_end: RP4-597A16" FT misc_feature 13931243..14040428 FT /note="annotated region of clone" FT misc_feature 13940588 FT /note="Clone_right_end: RP4-597A16" FT polyA_signal 13942686..13942691 FT polyA_site 13942745 FT polyA_signal 13942837..13942842 FT polyA_site 13942882 FT polyA_site 13942959 FT polyA_site 13942981 FT polyA_signal 13943579..13943584 FT polyA_site 13943610 FT polyA_signal 13943768..13943773 FT polyA_site 13943791 FT polyA_signal 13944429..13944434 FT polyA_site 13944452 FT misc_feature 13975872 FT /note="Clone_left_end: RP11-178K15" FT mRNA complement(join(13983806..13983850,13986072..13987033)) FT /locus_tag="CTA-520D8.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA805998.1 Em:AW020110.1 FT Em:AW022666.1 Em:BG676483.1 Em:BG741521.1 Em:BQ014470.1" FT misc_feature 14017226..14017573 FT /note="Sequence from overlapping clone RP11-178K15 FT (AL583942). Assembly confirmed by restriction digest" FT mRNA join(14026735..14026795,AL583942.12:1608..1681, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120821..120947), FT complement(AL031277.1:53738..53881), FT complement(AL031277.1:45243..47149)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-002" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:BC014468.1" FT /note="match: ESTs: Em:AW294520.1 Em:BG768088.1" FT mRNA join(14026735..14026795,AL583942.12:1608..1681, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120858..120947)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-006" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: ESTs: Em:AI090238.1 Em:AI090243.1 FT Em:AI095702.1" FT mRNA join(AL354712.18:100006..100641,13933668..13933801, FT 13936882..13937011,13940182..13940220,13940795..13940906, FT 13942400..13944452) FT /gene="PDPN" FT /locus_tag="CTA-520D8.1-001" FT /product="podoplanin" FT /note="match: cDNAs: Em:AF030428.1 Em:AF390106.1 FT Em:AJ225022.1 Em:AY194238.1 Em:BC014668.1 Em:BC022812.1 FT Em:Z81018.1" FT /note="match: ESTs: Em:BE887331.1 Em:BG750188.1 FT Em:BX381367.1 Em:CB990317.1 Em:CB990359.1" FT mRNA join(14031350..14032140,AL583942.12:1608..1681, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120821..120947), FT complement(AL031277.1:97120..97230), FT complement(AL031277.1:87477..91890), FT complement(AL031277.1:53738..53881), FT complement(AL031277.1:45243..47149)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-001" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:AK087820.1 Em:U17837.1 Em:U17838.1" FT /note="match: ESTs: Em:AA310789.1 Em:AI038089.1 FT Em:AI570790.1 Em:AI678060.1 Em:AI878850.1 Em:AI913354.1 FT Em:AI949181.1 Em:AL539898.2 Em:AL582399.2 Em:AW194447.1 FT Em:AW338707.1 Em:BE772927.1 Em:BE939505.1 Em:BF224316.1 FT Em:BF378912.1 Em:BG007440.1 Em:BG014042.1 Em:BM008066.1 FT Em:BM008289.1 Em:BM669202.1 Em:BM906566.1 Em:BM931116.1 FT Em:BQ027300.1 Em:BX457052.1 Em:BX643475.1 Em:CA425497.1 FT Em:R73190.1" FT mRNA join(AL354712.18:100303..100641,13933668..13933801, FT 13936882..13937011,13940182..13940220,13940795..13940900, FT 13942400..13944452) FT /gene="PDPN" FT /locus_tag="CTA-520D8.1-002" FT /product="podoplanin" FT /note="match: cDNAs: Em:AK075327.1 Em:AK075345.1" FT /note="match: ESTs: Em:AA468871.1 Em:AI634234.1 FT Em:BX378011.1 Em:BX378012.1 Em:CA312590.1 Em:DA031060.1" FT CDS join(AL354712.18:100347..100641,13933668..13933801, FT 13936882..13937011,13940182..13940220,13940795..13940906, FT 13942400..13942406) FT /gene="PDPN" FT /locus_tag="CTA-520D8.1-001" FT /standard_name="OTTHUMP00000009639" FT /product="podoplanin" FT /note="match: proteins: Sw:Q86YL7.2" FT /protein_id="CAI17984.2" FT /translation="MLTPLGKFSTAKFAVRLPRVWEARAPSLSGAPAPTPPAPPPSRSS FT RLGLWPRCFLIFPQLRILLLGPQESNNSTGTMWKVSALLFVLGSASLWVLAEGASTGQP FT EDDTETTGLEGGVAMPGAEDDVVTPGTSEDRYKSGLTTLVATSVNSVTGIRIEDLPTSE FT STVHAQEQSPSATASNVATSHSTEKVDGDTQTTVEKDGLSTVTLVGIIVGVLLAIGFIG FT AIIVVVMRKMSGRYSP" FT CDS join(AL354712.18:100347..100641,13933668..13933801, FT 13936882..13937011,13940182..13940220,13940795..13940900, FT 13942400..13942406) FT /gene="PDPN" FT /locus_tag="CTA-520D8.1-002" FT /standard_name="OTTHUMP00000009640" FT /product="podoplanin" FT /note="match: proteins: Tr:Q5T3U7.1" FT /protein_id="CAI17983.2" FT /translation="MLTPLGKFSTAKFAVRLPRVWEARAPSLSGAPAPTPPAPPPSRSS FT RLGLWPRCFLIFPQLRILLLGPQESNNSTGTMWKVSALLFVLGSASLWVLAEGASTGQP FT EDDTETTGLEGGVAMPGAEDDVVTPGTSEDRYKSGLTTLVATSVNSVTGIRIEDLPTSE FT STVHAQEQSPSATASNVATSHSTEKVDGDTQTTVEKDGLSTVTLVGIIVGVLLAIGFIG FT AIIVVVMRKMSGRP" FT mRNA join(AL354712.18:102002..102180,13933668..13933801, FT 13936882..13937011,13940182..13940220,13940795..13940906, FT 13942400..13942412) FT /gene="PDPN" FT /locus_tag="CTA-520D8.1-004" FT /product="podoplanin" FT /note="match: ESTs: Em:BG613155.1" FT mRNA join(AL354712.18:102013..102109,13933668..13933801, FT 13936882..13937011,13940182..13940220,13940795..13940900, FT 13942400..13942742) FT /gene="PDPN" FT /locus_tag="CTA-520D8.1-005" FT /product="podoplanin" FT /note="match: ESTs: Em:BQ214601.1" FT mRNA join(AL354712.18:102021..102180,13933668..13933801, FT 13940182..13940220,13940795..13940900,13942400..13942754) FT /gene="PDPN" FT /locus_tag="CTA-520D8.1-003" FT /product="podoplanin" FT /note="match: ESTs: Em:BG258154.1" FT misc_feature 14040429..14047613 FT /note="annotated region of clone" FT CDS join(14042101..14042109, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120821..120947), FT complement(AL031277.1:53738..53881), FT complement(AL031277.1:47124..47149)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-002" FT /standard_name="OTTHUMP00000009685" FT /product="PR domain containing 2, with ZNF domain" FT /protein_id="CAH70942.1" FT /translation="MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVW FT ATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNW FT ACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKR FT SSPKSRKATASAWRPDALHQRPRTSPGSIGRSKLQLQPSSRDHSSKSRHSGCSLTAPEV FT TWNQ" FT CDS join(14042101..14042109, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120821..120947), FT complement(AL031277.1:97120..97230), FT complement(AL031277.1:87477..91890), FT complement(AL031277.1:53761..53881)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-001" FT /standard_name="OTTHUMP00000009642" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: proteins: Sw:Q13029" FT /protein_id="CAH70943.1" FT /translation="MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVW FT ATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNW FT ACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKR FT SSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALE FT QPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEE FT EDDDDDELEDEGEEEASMPNENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPA FT MQIPRTKEEANGDVFETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAF FT GTQINRRRHERRHEAGLKRKPSQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIM FT NSEKASQDTINSSVVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRR FT KGGLEEPQPPAEQAQATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIQT FT NNNTSNCDVIEMESASADLYGINCLLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSE FT AKKRRTASPPALPKIKAETDSDPMVPSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQL FT LQTQDKLTPAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDF FT GKPSDGKAAWTDAGLTSKKSKLESHSDSPAWSLSGRDERETVSPPCFDEYKMSKEWTAS FT SAFSSVCNQQPLDLSSGVKQKAEGTGKTPVQWESVLDLSVHKKHCSDSEGKEFKESHSV FT QPTCSAVKKRKPTTCMLQKVLLNEYNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPG FT SGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPL FT LPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGP FT PTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEASLPMISFKQEELEN FT EGLKPREEPQSAAEQDVVVQETFNKNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEF FT CVQLFKDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHEFE FT SGTLRPQNFTDPSKAHVEHMQSLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKD FT PDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVD FT NMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKNAFRRMGQPKR FT LNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKNACESSSHICPYCN FT REFTYIGSLNKHAAFSCPKKPLSPPKKKVSHSSKKGGHSSPASSDKNSNSNHRRRTADA FT EIKMQSMQTPLGKTRARSSGPTQVPLPSSSFRSKQNVKFAASVKSKKPSSSSLRNSSPI FT RMAKITHVEGKKPKAVAKNHSAQLSSKTSRSLHVRVQKSKAVLQSKSTLASKKRTDRFN FT IKSRERSGGPVTRSLQLAAAADLSENKREDGSAKQELKDFSYSLRLASRCSPPAAPYIT FT RQYRKVKAPAAAQFQGPFFKE" FT misc_feature 14042428 FT /note="Clone_right_end: CTA-520D8" FT misc_feature 14045614 FT /note="Clone_left_end: RP5-1177E19" FT mRNA join(AL359771.27:95493..95553,14042036..14042109, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120821..120947), FT complement(AL031277.1:53738..53881), FT complement(AL031277.1:45243..47149)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-002" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:BC014468.1" FT /note="match: ESTs: Em:AW294520.1 Em:BG768088.1" FT mRNA join(AL359771.27:95493..95553,14042036..14042109, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120858..120947)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-006" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: ESTs: Em:AI090238.1 Em:AI090243.1 FT Em:AI095702.1" FT mRNA join(AL359771.27:100108..100898,14042036..14042109, FT complement(AL031277.1:139191..139308), FT complement(AL031277.1:137426..137529), FT complement(AL031277.1:128151..128303), FT complement(AL031277.1:120821..120947), FT complement(AL031277.1:97120..97230), FT complement(AL031277.1:87477..91890), FT complement(AL031277.1:53738..53881), FT complement(AL031277.1:45243..47149)) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-001" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:AK087820.1 Em:U17837.1 Em:U17838.1" FT /note="match: ESTs: Em:AA310789.1 Em:AI038089.1 FT Em:AI570790.1 Em:AI678060.1 Em:AI878850.1 Em:AI913354.1 FT Em:AI949181.1 Em:AL539898.2 Em:AL582399.2 Em:AW194447.1 FT Em:AW338707.1 Em:BE772927.1 Em:BE939505.1 Em:BF224316.1 FT Em:BF378912.1 Em:BG007440.1 Em:BG014042.1 Em:BM008066.1 FT Em:BM008289.1 Em:BM669202.1 Em:BM906566.1 Em:BM931116.1 FT Em:BQ027300.1 Em:BX457052.1 Em:BX643475.1 Em:CA425497.1 FT Em:R73190.1" FT misc_feature complement(14047614..14196802) FT /note="annotated region of clone" FT CDS join(AL583942.12:1673..1681,14057495..14057612, FT 14059274..14059377,14068500..14068652,14075856..14075982, FT 14142922..14143065,14149654..14149679) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-002" FT /standard_name="OTTHUMP00000009685" FT /product="PR domain containing 2, with ZNF domain" FT /protein_id="CAI19342.1" FT /translation="MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVW FT ATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNW FT ACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKR FT SSPKSRKATASAWRPDALHQRPRTSPGSIGRSKLQLQPSSRDHSSKSRHSGCSLTAPEV FT TWNQ" FT CDS join(AL583942.12:1673..1681,14057495..14057612, FT 14059274..14059377,14068500..14068652,14075856..14075982, FT 14099573..14099683,14104913..14109326,14142922..14143042) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-001" FT /standard_name="OTTHUMP00000009642" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: proteins: Sw:Q13029" FT /protein_id="CAI19343.1" FT /translation="MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVW FT ATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNW FT ACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKR FT SSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALE FT QPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEE FT EDDDDDELEDEGEEEASMPNENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPA FT MQIPRTKEEANGDVFETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAF FT GTQINRRRHERRHEAGLKRKPSQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIM FT NSEKASQDTINSSVVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRR FT KGGLEEPQPPAEQAQATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIQT FT NNNTSNCDVIEMESASADLYGINCLLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSE FT AKKRRTASPPALPKIKAETDSDPMVPSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQL FT LQTQDKLTPAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDF FT GKPSDGKAAWTDAGLTSKKSKLESHSDSPAWSLSGRDERETVSPPCFDEYKMSKEWTAS FT SAFSSVCNQQPLDLSSGVKQKAEGTGKTPVQWESVLDLSVHKKHCSDSEGKEFKESHSV FT QPTCSAVKKRKPTTCMLQKVLLNEYNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPG FT SGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPL FT LPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGP FT PTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEASLPMISFKQEELEN FT EGLKPREEPQSAAEQDVVVQETFNKNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEF FT CVQLFKDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHEFE FT SGTLRPQNFTDPSKAHVEHMQSLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKD FT PDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVD FT NMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKNAFRRMGQPKR FT LNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKNACESSSHICPYCN FT REFTYIGSLNKHAAFSCPKKPLSPPKKKVSHSSKKGGHSSPASSDKNSNSNHRRRTADA FT EIKMQSMQTPLGKTRARSSGPTQVPLPSSSFRSKQNVKFAASVKSKKPSSSSLRNSSPI FT RMAKITHVEGKKPKAVAKNHSAQLSSKTSRSLHVRVQKSKAVLQSKSTLASKKRTDRFN FT IKSRERSGGPVTRSLQLAAAADLSENKREDGSAKQELKDFSYSLRLASRCSPPAAPYIT FT RQYRKVKAPAAAQFQGPFFKE" FT polyA_site 14151574 FT polyA_signal 14151542..14151547 FT polyA_site 14149993 FT polyA_site 14114574 FT polyA_signal 14114555..14114560 FT polyA_site 14114343 FT polyA_signal 14114315..14114320 FT polyA_site 14114158 FT polyA_signal 14114134..14114139 FT mRNA complement(join(14104760..14105014,14105473..14105625)) FT /locus_tag="RP5-1177E19.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI808800.1" FT mRNA join(AL359771.27:95493..95553,AL583942.12:1608..1681, FT 14057495..14057612,14059274..14059377,14068500..14068652, FT 14075856..14075982,14142922..14143065,14149654..14151560) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-002" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:BC014468.1" FT /note="match: ESTs: Em:AW294520.1 Em:BG768088.1" FT mRNA join(AL359771.27:95493..95553,AL583942.12:1608..1681, FT 14057495..14057612,14059274..14059377,14068500..14068652, FT 14075856..14075945) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-006" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: ESTs: Em:AI090238.1 Em:AI090243.1 FT Em:AI095702.1" FT CDS join(14099665..14099683,14104913..14109326, FT 14113010..14113022) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-004" FT /standard_name="OTTHUMP00000009687" FT /product="PR domain containing 2, with ZNF domain" FT /protein_id="CAB37643.1" FT /translation="MRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELATPAPAW FT EPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENSV FT KEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEANGDVFETFMFPCQH FT CERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSQT FT LQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSSVVEENGEVKEL FT HPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQAQATQNVYVPS FT TEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESASADLYGINC FT LLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIKAETDSDPM FT VPSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEIAKLGPVC FT VSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSKKSKLES FT HSDSPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVKQKAEG FT TGKTPVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNE FT YNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTP FT SLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSN FT ATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSS FT PSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFN FT KNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNI FT FVCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLP FT EDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHR FT NPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPK FT KNPVPLKQTVQPKNGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKN FT QLVQKAILQKNKSAKQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSP FT PKKKVSHSSKKGGHSSPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQV FT PLPSSSFRSKQNVKFAASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQL FT SSKTSRSLHVRVQKSKAVLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLS FT ENKREDGSAKQELKDFRNFL" FT mRNA join(14098221..14098709,14099573..14099683, FT 14104913..14104958) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-009" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: ESTs: Em:BX481705.1" FT mRNA join(AL359771.27:100108..100898,AL583942.12:1608..1681, FT 14057495..14057612,14059274..14059377,14068500..14068652, FT 14075856..14075982,14099573..14099683,14104913..14109326, FT 14142922..14143065,14149654..14151560) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-001" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:AK087820.1 Em:U17837.1 Em:U17838.1" FT /note="match: ESTs: Em:AA310789.1 Em:AI038089.1 FT Em:AI570790.1 Em:AI678060.1 Em:AI878850.1 Em:AI913354.1 FT Em:AI949181.1 Em:AL539898.2 Em:AL582399.2 Em:AW194447.1 FT Em:AW338707.1 Em:BE772927.1 Em:BE939505.1 Em:BF224316.1 FT Em:BF378912.1 Em:BG007440.1 Em:BG014042.1 Em:BM008066.1 FT Em:BM008289.1 Em:BM669202.1 Em:BM906566.1 Em:BM931116.1 FT Em:BQ027300.1 Em:BX457052.1 Em:BX643475.1 Em:CA425497.1 FT Em:R73190.1" FT mRNA join(<14075898..14075982,14099573..14099683, FT 14104913..14109326,14113010..14114574) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-003" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:D45132.1" FT /note="match: ESTs: Em:AA371064.1 Em:AU141710.1 FT Em:AW502273.1 Em:BI912316.1 Em:BQ425878.1 Em:N24238.1" FT CDS join(<14075898..14075982,14099573..14099683, FT 14104913..14109326,14113010..14113022) FT /codon_start=1 FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-003" FT /standard_name="OTTHUMP00000009686" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: proteins: Sw:Q13029" FT /protein_id="CAI19344.1" FT /translation="EDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKGNKIQD FT IQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELATPAPAW FT EPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENSV FT KEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEANGDVFETFMFPCQH FT CERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSQT FT LQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSSVVEENGEVKEL FT HPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQAQATQNVYVPS FT TEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESASADLYGINC FT LLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIKAETDSDPM FT VPSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEIAKLGPVC FT VSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSKKSKLES FT HSDSPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVKQKAEG FT TGKTPVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNE FT YNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTP FT SLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSN FT ATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSS FT PSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFN FT KNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNI FT FVCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLP FT EDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHR FT NPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPK FT KNPVPLKQTVQPKNGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKN FT QLVQKAILQKNKSAKQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSP FT PKKKVSHSSKKGGHSSPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQV FT PLPSSSFRSKQNVKFAASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQL FT SSKTSRSLHVRVQKSKAVLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLS FT ENKREDGSAKQELKDFRNFL" FT mRNA join(14075910..14075982,14095613..14095668, FT 14099573..14099683,14104913..14109326,14113010..14114152) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-004" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:BX647310.1" FT /note="match: ESTs: Em:BQ708518.1" FT mRNA join(14075895..14075982,14099573..14099683, FT 14104913..14105152,14107414..14109326,14113010..14114152) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-005" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: cDNAs: Em:BC032768.1" FT /note="match: ESTs: Em:BE780977.1" FT mRNA join(14075919..14075982,14099573..14100166) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-008" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: ESTs: Em:BX643475.1" FT mRNA join(14057513..14057612,14068500..14068652, FT 14075856..14075982,14095613..14095668,14099573..14099683, FT 14113010..14113562) FT /gene="PRDM2" FT /locus_tag="RP5-1177E19.1-007" FT /product="PR domain containing 2, with ZNF domain" FT /note="match: ESTs: Em:AL561117.2" FT misc_feature complement(14196803..14253661) FT /note="annotated region of clone" FT mRNA join(14219052..14220251,complement(Z99291.1:<7884..8041)) FT /gene="C1orf196" FT /locus_tag="RP1-308I13.1-001" FT /product="chromosome 1 open reading frame 196" FT /note="match: cDNAs: Em:AK018156.1" FT CDS join(14220131..14220251,complement(Z99291.1:<7884..8041)) FT /gene="C1orf196" FT /locus_tag="RP1-308I13.1-001" FT /standard_name="OTTHUMP00000009719" FT /product="chromosome 1 open reading frame 196" FT /protein_id="CAI22533.1" FT /translation="MTNTKDPKRAMESTLATSNSATGPVTFSHVFGQQCQLMQAAVQSL FT HTLNDQISHFIVTKSKALEEDKDPFLPTEKETLKSSMILMRHLLMDAQ" FT misc_feature complement(14253662..14418462) FT /note="annotated region of clone" FT misc_feature complement(14418463..14514970) FT /note="annotated region of clone" FT mRNA join(complement(AL031273.1:33411..34610), FT 14506930..>14507087) FT /gene="C1orf196" FT /locus_tag="RP1-308I13.1-001" FT /product="chromosome 1 open reading frame 196" FT /note="match: cDNAs: Em:AK018156.1" FT CDS join(complement(AL031273.1:33411..33531), FT 14506930..>14507087) FT /gene="C1orf196" FT /locus_tag="RP1-308I13.1-001" FT /standard_name="OTTHUMP00000009719" FT /product="chromosome 1 open reading frame 196" FT /protein_id="CAI20112.1" FT /translation="MTNTKDPKRAMESTLATSNSATGPVTFSHVFGQQCQLMQAAVQSL FT HTLNDQISHFIVTKSKALEEDKDPFLPTEKETLKSSMILMRHLLMDAQ" FT misc_feature 14514971..14656478 FT /note="annotated region of clone" FT mRNA complement(join(14548386..14548602,14549549..14549613)) FT /locus_tag="RP11-344F13.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI473256.1" FT misc_feature 14652479 FT /note="Clone_left_end: RP4-704D23" FT misc_feature 14656479..14741223 FT /note="annotated region of clone" FT misc_feature 14667131..14667143 FT /note="Single clone region. Restriction digest (BamHI, FT EcorI and HindIII) confirms assembly" FT mRNA complement(join(14675450..14675873,14677364..14677518)) FT /locus_tag="RP4-704D23.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG185059.1 Em:BG202093.1 FT Em:BG210591.1 Em:BG218925.1" FT misc_feature 14739225 FT /note="Clone_right_end: RP4-704D23" FT misc_feature 14782162 FT /note="Clone_left_end: RP11-19M4" FT misc_feature 14818213 FT /note="Clone_right_end: RP11-285P3" FT misc_feature 14904748 FT /note="Clone_left_end: RP1-243L18" FT misc_feature complement(14908748..15017404) FT /note="annotated region of clone" FT misc_feature complement(14986320) FT /note="Clone_right_end: RP3-410I8" FT unsure complement(14947146) FT /note="Tandem repeat. Forced join. forced join made here FT using information from the restiction digest approx FT 300-500bp missing" FT mRNA join(14925200..14925719,AL391215.12:38519..38710, FT AL391215.12:112584..112720, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:149268..149398), FT complement(AL035405.13:145948..145998), FT complement(AL035405.13:143817..143940), FT complement(AL035405.13:115185..115390), FT complement(AL035405.13:114637..114755), FT complement(AL035405.13:107796..108027), FT complement(AL035405.13:106110..106211), FT complement(AL035405.13:105381..105547), FT complement(AL035405.13:97029..97143), FT complement(AL035405.13:91527..95099)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-001" FT /product="kazrin" FT /note="match: cDNAs: Em:BC036877.1" FT /note="match: ESTs: Em:BF108734.1 Em:BX102729.1 FT Em:R53548.1" FT CDS join(14925494..14925719,AL391215.12:38519..38710, FT AL391215.12:112584..112720, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:149268..149398), FT complement(AL035405.13:145948..145998), FT complement(AL035405.13:143817..143940), FT complement(AL035405.13:115185..115390), FT complement(AL035405.13:114637..114755), FT complement(AL035405.13:107796..108027), FT complement(AL035405.13:106110..106211), FT complement(AL035405.13:105381..105547), FT complement(AL035405.13:97029..97143), FT complement(AL035405.13:94935..95099)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-001" FT /standard_name="OTTHUMP00000002026" FT /product="kazrin" FT /note="match: proteins: Tr:Q8BJ43" FT /protein_id="CAQ08073.1" FT /translation="MMEDNKQLALRIDGAVQSASQEVTNLRAELTATNRRLAELSGGGG FT PGPGPGAAASASAAGDSAATNMENPQLGAQVLLREEVSRLQEEVHLLRQMKEMLAKDLE FT ESQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKTDLVSQMQQLY FT ATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHATAL FT RSQLDLKDNRMKELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVVQADLP FT LTAAIRQSQQTLYHSHPPHPADRQAVRVSPCHSRQPSVISDASAAEGDRSSTPSDINSP FT RHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKKEKMGFGSISRVFARGKQRK FT SLDPGLFDDSDSQCSPTRQSLSLSEGEEQMDRLQQVELVRTTPMSHWKAGTVQAWLEVV FT MAMPMYVKACTENVKSGKVLLSLSDEDLQLGLGVCSSLHRRKLRLAIEDYRDAEAGRSL FT SKAAELDHHWVAKAWLNDIGLSQYSQAFQNHLVDGRMLNSLMKRDLEKHLNVSKKFHQV FT SILLGIELLYQVNFSREALQERRARCETQNIDPVVWTNQRVLKWVRDIDLKEYADNLTN FT SGVHGAVLVLEPTFNAEAMATALGIPSGKHILRRHLAEEMSAVFHPANSTGIREAERFG FT TPPGRASSVTRAGKEENSSGLKYKAGRLPLGKIGRGFSSKDPDFHDDYGSLQNEDCGDD FT DPQSRLEQCRLEGYNSLEVTNV" FT mRNA join(14925200..14925719,AL391215.12:38519..38710, FT AL391215.12:112584..112720, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:145948..149398), FT complement(AL035405.13:143010..143940)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-002" FT /product="kazrin" FT /note="match: cDNAs: Em:AB028949.1" FT misc_feature complement(14908748) FT /note="Clone_left_end: RP1-243L18" FT misc_feature complement(15017405..15086321) FT /note="annotated region of clone" FT CDS complement(join(15018625..15018903,15019063..15019109)) FT /pseudo FT /locus_tag="RP3-410I8.1-001" FT /product="tubulin-specific chaperone a (TBCA) pseudogene" FT /note="match: proteins: Sw:O75347 Sw:P48427 Sw:P48428 FT Sw:P80584 Sw:P80585 Tr:O75347 Tr:Q5I0U7 Tr:Q6PEC1 Tr:Q7PYV8 FT Tr:Q7ZV25" FT misc_feature complement(15086322..15192239) FT /note="annotated region of clone" FT misc_feature 15192240..15250661 FT /note="annotated region of clone" FT misc_feature 15202449..15202484 FT /note="Sequence from overlapping clone bA315J13 (AL391866). FT Assembly confirmed by restriction digest" FT misc_feature 15250414..15250453 FT /note="Sequence from overlapping clone bA315J13 (AL391866). FT Assembly confirmed by restriction digest" FT misc_feature 15250561 FT /note="Clone_right_end: RP11-227B14" FT mRNA join(15250626..15250661,AL391215.12:2001..2407, FT AL391215.12:38519..38710,AL391215.12:112584..112720, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:149268..149398), FT complement(AL035405.13:145948..145998), FT complement(AL035405.13:141418..143940)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-003" FT /product="kazrin" FT /note="match: cDNAs: Em:BC035501.2" FT /note="match: ESTs: Em:BM675115.1 Em:BU732755.1 FT Em:CD369334.1" FT misc_feature 15250662..15369212 FT /note="annotated region of clone" FT CDS join(15250861..15251068,15287180..15287371, FT 15361245..15361381,complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:149268..149398), FT complement(AL035405.13:145948..145998), FT complement(AL035405.13:143773..143940)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-003" FT /standard_name="OTTHUMP00000002028" FT /product="kazrin" FT /note="match: proteins: Tr:Q8IYN7.3" FT /protein_id="CAI13899.1" FT /translation="MRAADSGSWERVRQLAAQGEPAPSCGAGAGPARPPGPAACEQCVD FT AAGPGDRPRAGVPRVRADGDCSQPVLLREEVSRLQEEVHLLRQMKEMLAKDLEESQGGK FT SSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKTDLVSQMQQLYATLESR FT EEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHATALRSQLDL FT KDNRMKELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVVQADLPLTAAIR FT QSQQTLYHSHPPHPADRQAVRVSPCHSRQPSVISDASAAEGDRSSTPSDINSPRHRTHS FT LCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKKEKMGFGSISRVFARGKQRKSLDPGL FT FDGTAPDYYIEEDADW" FT mRNA join(15256296..15256540,15287180..15287371, FT 15361245..15361381,complement(AL035405.13:165411..165581), FT complement(AL035405.13:<153425..153479)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-005" FT /product="kazrin" FT /note="match: ESTs: Em:BG479900.1" FT CDS join(15287236..15287371,15361245..15361381, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:<153425..153479)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-005" FT /standard_name="OTTHUMP00000002029" FT /product="kazrin" FT /protein_id="CAQ06786.1" FT /translation="MKEMLAKDLEESQGGKSSEVLSATELRVQLAQKEQELARAKEALQ FT AMKADRKRLKGEKTDLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEK FT DLLEREKWELRRQAKEATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTKDVPKR FT HSL" FT mRNA join(AL445263.6:58487..58522,15250662..15251068, FT 15287180..15287371,15361245..15361381, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:149268..149398), FT complement(AL035405.13:145948..145998), FT complement(AL035405.13:141418..143940)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-003" FT /product="kazrin" FT /note="match: cDNAs: Em:BC035501.2" FT /note="match: ESTs: Em:BM675115.1 Em:BU732755.1 FT Em:CD369334.1" FT mRNA join(complement(AL034395.6:91686..92205), FT 15287180..15287371,15361245..15361381, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:149268..149398), FT complement(AL035405.13:145948..145998), FT complement(AL035405.13:143817..143940), FT complement(AL035405.13:115185..115390), FT complement(AL035405.13:114637..114755), FT complement(AL035405.13:107796..108027), FT complement(AL035405.13:106110..106211), FT complement(AL035405.13:105381..105547), FT complement(AL035405.13:97029..97143), FT complement(AL035405.13:91527..95099)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-001" FT /product="kazrin" FT /note="match: cDNAs: Em:BC036877.1" FT /note="match: ESTs: Em:BF108734.1 Em:BX102729.1 FT Em:R53548.1" FT CDS join(complement(AL034395.6:91686..91911), FT 15287180..15287371,15361245..15361381, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:149268..149398), FT complement(AL035405.13:145948..145998), FT complement(AL035405.13:143817..143940), FT complement(AL035405.13:115185..115390), FT complement(AL035405.13:114637..114755), FT complement(AL035405.13:107796..108027), FT complement(AL035405.13:106110..106211), FT complement(AL035405.13:105381..105547), FT complement(AL035405.13:97029..97143), FT complement(AL035405.13:94935..95099)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-001" FT /standard_name="OTTHUMP00000002026" FT /product="kazrin" FT /note="match: proteins: Tr:Q8BJ43" FT /protein_id="CAQ06787.1" FT /translation="MMEDNKQLALRIDGAVQSASQEVTNLRAELTATNRRLAELSGGGG FT PGPGPGAAASASAAGDSAATNMENPQLGAQVLLREEVSRLQEEVHLLRQMKEMLAKDLE FT ESQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKTDLVSQMQQLY FT ATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHATAL FT RSQLDLKDNRMKELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVVQADLP FT LTAAIRQSQQTLYHSHPPHPADRQAVRVSPCHSRQPSVISDASAAEGDRSSTPSDINSP FT RHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKKEKMGFGSISRVFARGKQRK FT SLDPGLFDDSDSQCSPTRQSLSLSEGEEQMDRLQQVELVRTTPMSHWKAGTVQAWLEVV FT MAMPMYVKACTENVKSGKVLLSLSDEDLQLGLGVCSSLHRRKLRLAIEDYRDAEAGRSL FT SKAAELDHHWVAKAWLNDIGLSQYSQAFQNHLVDGRMLNSLMKRDLEKHLNVSKKFHQV FT SILLGIELLYQVNFSREALQERRARCETQNIDPVVWTNQRVLKWVRDIDLKEYADNLTN FT SGVHGAVLVLEPTFNAEAMATALGIPSGKHILRRHLAEEMSAVFHPANSTGIREAERFG FT TPPGRASSVTRAGKEENSSGLKYKAGRLPLGKIGRGFSSKDPDFHDDYGSLQNEDCGDD FT DPQSRLEQCRLEGYNSLEVTNV" FT mRNA join(complement(AL034395.6:91686..92205), FT 15287180..15287371,15361245..15361381, FT complement(AL035405.13:165411..165581), FT complement(AL035405.13:153290..153479), FT complement(AL035405.13:145948..149398), FT complement(AL035405.13:143010..143940)) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-002" FT /product="kazrin" FT /note="match: cDNAs: Em:AB028949.1" FT misc_feature 15365213 FT /note="Clone_left_end: RP1-21O18" FT misc_feature complement(15369213..15536065) FT /note="annotated region of clone" FT CDS join(AL391215.12:2200..2407,AL391215.12:38519..38710, FT AL391215.12:112584..112720,15370485..15370655, FT 15382587..15382776,15386668..15386798,15390068..15390118, FT 15392126..15392293) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-003" FT /standard_name="OTTHUMP00000002028" FT /product="kazrin" FT /note="match: proteins: Tr:Q8IYN7.3" FT /protein_id="CAI19827.1" FT /translation="MRAADSGSWERVRQLAAQGEPAPSCGAGAGPARPPGPAACEQCVD FT AAGPGDRPRAGVPRVRADGDCSQPVLLREEVSRLQEEVHLLRQMKEMLAKDLEESQGGK FT SSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKTDLVSQMQQLYATLESR FT EEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHATALRSQLDL FT KDNRMKELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVVQADLPLTAAIR FT QSQQTLYHSHPPHPADRQAVRVSPCHSRQPSVISDASAAEGDRSSTPSDINSPRHRTHS FT LCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKKEKMGFGSISRVFARGKQRKSLDPGL FT FDGTAPDYYIEEDADW" FT mRNA join(AL391215.12:7635..7879,AL391215.12:38519..38710, FT AL391215.12:112584..112720,15370485..15370655, FT 15382587..>15382641) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-005" FT /product="kazrin" FT /note="match: ESTs: Em:BG479900.1" FT CDS complement(join(15518324..15518937,15519255..15519341)) FT /pseudo FT /locus_tag="RP1-21O18.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q7SZQ4 Tr:Q91VG0 Tr:Q9BVZ1 FT Tr:Q9D3P5 Tr:Q9GZY8 Tr:Q9H690 Tr:Q9NRG8" FT mRNA complement(join(15494970..15495273,15497677..15497813)) FT /gene="C1orf195" FT /locus_tag="RP1-21O18.4-001" FT /product="chromosome 1 open reading frame 195" FT /note="match: ESTs: Em:AW269992.1" FT CDS complement(join(15494991..15495273,15497677..15497774)) FT /gene="C1orf195" FT /locus_tag="RP1-21O18.4-001" FT /standard_name="OTTHUMP00000035972" FT /product="chromosome 1 open reading frame 195" FT /protein_id="CAI19829.1" FT /translation="MPSSTLTCKPFDLKQRSSRRGPKSTASASPRSCLKPSCGKQVCLL FT LSVRRSQSLAHPGRDSTRVLSYQQTSSDAVSQYKHTGKVEELYGLRLSWLSQAQFLLAQ FT DKTAYAVKSVVLPASNHKTKGQ" FT CDS join(AL391215.12:38575..38710,AL391215.12:112584..112720, FT 15370485..15370655,15382587..>15382641) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-005" FT /standard_name="OTTHUMP00000002029" FT /product="kazrin" FT /protein_id="CAQ07836.1" FT /translation="MKEMLAKDLEESQGGKSSEVLSATELRVQLAQKEQELARAKEALQ FT AMKADRKRLKGEKTDLVSQMQQLYATLESREEQLRDFIRNYEQHRKESEDAVKALAKEK FT DLLEREKWELRRQAKEATDHATALRSQLDLKDNRMKELEAELAMAKQSLATLTKDVPKR FT HSL" FT mRNA join(15480285..15480451,AL391094.12:7326..7862, FT AL391094.12:11757..12807) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-002" FT /product="transmembrane protein 51" FT /note="match: cDNAs: Em:AK001061.1 Em:BC000593.1 FT Em:BC000593.2" FT mRNA join(15480285..15480451,AL391094.12:2921..2993, FT AL391094.12:7326..7862,AL391094.12:11757..12909) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-001" FT /product="transmembrane protein 51" FT /note="match: cDNAs: Em:AK098467.1 Em:AK129922.1 FT Em:BC005177.1 Em:BC005177.2" FT /note="match: ESTs: Em:BM310196.1 Em:CA306733.1 FT Em:CA307762.1 Em:CD367258.1" FT mRNA join(15479073..15479280,AL391094.12:7326..7862, FT AL391094.12:11757..>11938) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-004" FT /product="transmembrane protein 51" FT /note="match: ESTs: Em:BI914218.1" FT mRNA join(15479062..15479280,AL391094.12:2921..2993, FT AL391094.12:7326..7862,AL391094.12:11757..12770) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-003" FT /product="transmembrane protein 51" FT /note="match: cDNAs: Em:CR599423.1" FT /note="match: ESTs: Em:BF313820.1 Em:BI754407.1 FT Em:BM842256.1 Em:BM842590.1 Em:BX335774.2" FT mRNA complement(join(15442449..15444303,15444823..15445400, FT 15447073..15447193,15447468..15447555,15450724..15450869, FT 15478787..15478960)) FT /gene="C1orf126" FT /locus_tag="RP1-21O18.2-001" FT /product="chromosome 1 open reading frame 126" FT /note="match: cDNAs: Em:AK074283.1 Em:AK124431.1" FT mRNA complement(join(15442448..15444303,15444823..15445400, FT 15447468..15447555,15450724..15450869,15478787..15478898)) FT /gene="C1orf126" FT /locus_tag="RP1-21O18.2-002" FT /product="chromosome 1 open reading frame 126" FT /note="match: cDNAs: Em:AK124431.1 Em:BC128126.1 FT Em:BC128127.1" FT mRNA join(AL445263.6:58487..58522,AL391215.12:2001..2407, FT AL391215.12:38519..38710,AL391215.12:112584..112720, FT 15370485..15370655,15382587..15382776,15386668..15386798, FT 15390068..15390118,15392126..15394648) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-003" FT /product="kazrin" FT /note="match: cDNAs: Em:BC035501.2" FT /note="match: ESTs: Em:BM675115.1 Em:BU732755.1 FT Em:CD369334.1" FT misc_feature complement(15465993..15465996) FT /note="1443 bases of IS150 transposon (X07037) removed FT here. This sequence represents the duplicated flanking FT sequence of the IS150" FT polyA_site 15444539 FT polyA_signal 15444519..15444524 FT mRNA join(complement(AL034395.6:91686..92205), FT AL391215.12:38519..38710,AL391215.12:112584..112720, FT 15370485..15370655,15382587..15382776,15386668..15386798, FT 15390068..15390118,15392126..15392249,15420676..15420881, FT 15421311..15421429,15428039..15428270,15429855..15429956, FT 15430519..15430685,15438923..15439037,15440967..15444539) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-001" FT /product="kazrin" FT /note="match: cDNAs: Em:BC036877.1" FT /note="match: ESTs: Em:BF108734.1 Em:BX102729.1 FT Em:R53548.1" FT CDS join(complement(AL034395.6:91686..91911), FT AL391215.12:38519..38710,AL391215.12:112584..112720, FT 15370485..15370655,15382587..15382776,15386668..15386798, FT 15390068..15390118,15392126..15392249,15420676..15420881, FT 15421311..15421429,15428039..15428270,15429855..15429956, FT 15430519..15430685,15438923..15439037,15440967..15441131) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-001" FT /standard_name="OTTHUMP00000002026" FT /product="kazrin" FT /note="match: proteins: Tr:Q8BJ43" FT /protein_id="CAQ07837.1" FT /translation="MMEDNKQLALRIDGAVQSASQEVTNLRAELTATNRRLAELSGGGG FT PGPGPGAAASASAAGDSAATNMENPQLGAQVLLREEVSRLQEEVHLLRQMKEMLAKDLE FT ESQGGKSSEVLSATELRVQLAQKEQELARAKEALQAMKADRKRLKGEKTDLVSQMQQLY FT ATLESREEQLRDFIRNYEQHRKESEDAVKALAKEKDLLEREKWELRRQAKEATDHATAL FT RSQLDLKDNRMKELEAELAMAKQSLATLTKDVPKRHSLAMPGETVLNGNQEWVVQADLP FT LTAAIRQSQQTLYHSHPPHPADRQAVRVSPCHSRQPSVISDASAAEGDRSSTPSDINSP FT RHRTHSLCNGDSPGPVQKNLHNPIVQSLEDLEDQKRKKKKEKMGFGSISRVFARGKQRK FT SLDPGLFDDSDSQCSPTRQSLSLSEGEEQMDRLQQVELVRTTPMSHWKAGTVQAWLEVV FT MAMPMYVKACTENVKSGKVLLSLSDEDLQLGLGVCSSLHRRKLRLAIEDYRDAEAGRSL FT SKAAELDHHWVAKAWLNDIGLSQYSQAFQNHLVDGRMLNSLMKRDLEKHLNVSKKFHQV FT SILLGIELLYQVNFSREALQERRARCETQNIDPVVWTNQRVLKWVRDIDLKEYADNLTN FT SGVHGAVLVLEPTFNAEAMATALGIPSGKHILRRHLAEEMSAVFHPANSTGIREAERFG FT TPPGRASSVTRAGKEENSSGLKYKAGRLPLGKIGRGFSSKDPDFHDDYGSLQNEDCGDD FT DPQSRLEQCRLEGYNSLEVTNV" FT mRNA join(complement(AL034395.6:91686..92205), FT AL391215.12:38519..38710,AL391215.12:112584..112720, FT 15370485..15370655,15382587..15382776,15386668..15390118, FT 15392126..15393056) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-002" FT /product="kazrin" FT /note="match: cDNAs: Em:AB028949.1" FT mRNA join(15425525..15426599,15427707..15428270, FT 15429855..15429956,15430519..15430685,15438923..15439037, FT 15440967..15444538) FT /gene="RP1-21O18.1" FT /locus_tag="RP1-21O18.1-004" FT /product="kazrin" FT /note="match: cDNAs: Em:BX648256.1" FT polyA_site 15394648 FT polyA_signal 15394625..15394630 FT misc_feature complement(15369213) FT /note="Clone_left_end: RP1-21O18" FT misc_feature 15536066..15579735 FT /note="annotated region of clone" FT CDS join(15541584..15541927,15545822..>15546003) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-004" FT /standard_name="OTTHUMP00000070984" FT /product="transmembrane protein 51" FT /protein_id="CAI95771.1" FT /translation="MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTA FT QGSNKTEVGGGILKSKTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPT FT GAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYES FT LTGLDETTPTST" FT CDS join(15541584..15541927,15545822..15546239) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-001" FT /standard_name="OTTHUMP00000002031" FT /product="transmembrane protein 51" FT /note="match: proteins: Sw:Q99LG1 Sw:Q9NW97 Tr:Q9BSA0" FT /protein_id="CAI23267.1" FT /translation="MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTA FT QGSNKTEVGGGILKSKTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPT FT GAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYES FT LTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPD FT KNVPPPSIEPLTPPPQYDEVQEKAPDTRPPD" FT polyA_signal 15546952..15546957 FT polyA_site 15546974 FT misc_feature 15549715 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 200bp by restriction digest data" FT misc_feature 15550898 FT /note="Clone_left_end: RP4-560M15" FT mRNA join(15563065..15563257,15578267..15578373, FT AL158174.8:21079..21285,AL031283.26:9050..9317, FT AL031283.26:16335..16444,AL031283.26:20856..21092, FT AL031283.26:28264..28387,AL031283.26:32708..32838, FT AL031283.26:36029..36118,AL031283.26:37475..37579, FT AL031283.26:44103..44210,AL031283.26:46710..46793, FT AL031283.26:47928..48080,AL031283.26:48997..49192, FT AL031283.26:61387..61544,AL031283.26:64734..64841, FT AL031283.26:65067..65174,AL031283.26:68693..>68717) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-005" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AK093300.1 Em:AX748041.1" FT /note="match: ESTs: Em:BQ082346.1" FT CDS join(15563221..15563257,15578267..15578373, FT AL158174.8:21079..21285,AL031283.26:9050..9317, FT AL031283.26:16335..16444,AL031283.26:20856..21092, FT AL031283.26:28264..28387,AL031283.26:32708..32838, FT AL031283.26:36029..36118,AL031283.26:37475..37579, FT AL031283.26:44103..44210,AL031283.26:46710..46793, FT AL031283.26:47928..48080,AL031283.26:48997..49192, FT AL031283.26:61387..61544,AL031283.26:64734..64841, FT AL031283.26:65067..65174,AL031283.26:68693..>68717) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-005" FT /standard_name="OTTHUMP00000002115" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: proteins: Tr:Q8BLA4 Tr:Q8NA05" FT /protein_id="CAI23268.1" FT /translation="MTSLEPCRLFIYGKTERMKAYLKSAEGFFVLNKSTTIGRHENSDL FT VLQSPDIDNHHALIEYNEAECSFVLQDFNSRNGTFVNECHIQNVAVKLIPGDILRFGSA FT GLTYELVIENPPPVSFPWMRGPAPWPGPQPPRATQQPNQAPPPSHIPFHQGVQPAPMQR FT SWSQAFPRPTVVLPASHRRPVSANKEMFSFVVDDARKPPVIKQVWTNAMKLSEKSVAEG FT IPGAVPPAEIYVEEDLAQQDKDEIILLLGKEVSRLSDYEIESKYKDVIIANLQNEVAEL FT SQKVSETTTSRQNEKEISQKCQVLDEDIDAKQKEIQSLKSQISALQKGYSKVLCQTLSE FT RNSEITSLKNEGENLKRDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDH FT QLEALGSRCSVLKEELKQEDAHRELREAQEKELKLCKTQIQDMEKEMKKLRAELRKSCT FT EQSVISRTLREKSKVEEKLQEDSRRKLLQLQEMGNRESVIKINLERAVGQLEHFRSQVI FT KATYGRAKPFRDKPVTDQQLIEKITQVTEDNINFQQKKWTLQKETQLSNSKQEETTENI FT EKLRTSLDSCQACMKISCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVLRHALSWLEE FT VEQLLRDLGILPSSPNKDQVQQFSGNSAVFTAGKAAGASGREGEAERGEARARGEAQSQ FT NQATDGREGGKALEEYITQERNRAKETLEEERKRMQELESLLAQQKKALAKSITQEKNR FT VKEALEEEQTRVQELEERLARQKEVLESSIAH" FT mRNA join(15573768..15573891,15578267..15578373, FT AL158174.8:21079..21285,AL031283.26:9050..9317, FT AL031283.26:16281..16444,AL031283.26:28264..28387, FT AL031283.26:32708..32838,AL031283.26:36029..36118, FT AL031283.26:37475..37579,AL031283.26:46710..46793, FT AL031283.26:47928..48080,AL031283.26:48997..49192, FT AL031283.26:59132..59202,AL031283.26:61387..61539, FT AL031283.26:64734..64841,AL031283.26:65067..>65090) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-006" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AK057963.1" FT /note="match: ESTs: Em:AL704167.1 Em:BX279715.1 FT Em:BX489462.1" FT misc_feature 15577735 FT /note="Clone_right_end: RP5-903E17" FT mRNA join(complement(AL035405.13:55615..55781), FT 15541391..15541927,15545822..15546872) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-002" FT /product="transmembrane protein 51" FT /note="match: cDNAs: Em:AK001061.1 Em:BC000593.1 FT Em:BC000593.2" FT mRNA join(complement(AL035405.13:55615..55781), FT 15536986..15537058,15541391..15541927,15545822..15546974) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-001" FT /product="transmembrane protein 51" FT /note="match: cDNAs: Em:AK098467.1 Em:AK129922.1 FT Em:BC005177.1 Em:BC005177.2" FT /note="match: ESTs: Em:BM310196.1 Em:CA306733.1 FT Em:CA307762.1 Em:CD367258.1" FT mRNA join(complement(AL035405.13:56786..56993), FT 15541391..15541927,15545822..>15546003) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-004" FT /product="transmembrane protein 51" FT /note="match: ESTs: Em:BI914218.1" FT mRNA join(complement(AL035405.13:56786..57004), FT 15536986..15537058,15541391..15541927,15545822..15546835) FT /gene="TMEM51" FT /locus_tag="RP5-903E17.1-003" FT /product="transmembrane protein 51" FT /note="match: cDNAs: Em:CR599423.1" FT /note="match: ESTs: Em:BF313820.1 Em:BI754407.1 FT Em:BM842256.1 Em:BM842590.1 Em:BX335774.2" FT misc_feature 15579736..15606845 FT /note="annotated region of clone" FT mRNA join(AL391094.12:29000..29192,AL391094.12:44202..44308, FT 15598819..15599025,AL031283.26:9050..9317, FT AL031283.26:16335..16444,AL031283.26:20856..21092, FT AL031283.26:28264..28387,AL031283.26:32708..32838, FT AL031283.26:36029..36118,AL031283.26:37475..37579, FT AL031283.26:44103..44210,AL031283.26:46710..46793, FT AL031283.26:47928..48080,AL031283.26:48997..49192, FT AL031283.26:61387..61544,AL031283.26:64734..64841, FT AL031283.26:65067..65174,AL031283.26:68693..>68717) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-005" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AK093300.1 Em:AX748041.1" FT /note="match: ESTs: Em:BQ082346.1" FT CDS join(AL391094.12:29156..29192,AL391094.12:44202..44308, FT 15598819..15599025,AL031283.26:9050..9317, FT AL031283.26:16335..16444,AL031283.26:20856..21092, FT AL031283.26:28264..28387,AL031283.26:32708..32838, FT AL031283.26:36029..36118,AL031283.26:37475..37579, FT AL031283.26:44103..44210,AL031283.26:46710..46793, FT AL031283.26:47928..48080,AL031283.26:48997..49192, FT AL031283.26:61387..61544,AL031283.26:64734..64841, FT AL031283.26:65067..65174,AL031283.26:68693..>68717) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-005" FT /standard_name="OTTHUMP00000002115" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: proteins: Tr:Q8BLA4 Tr:Q8NA05" FT /protein_id="CAI21811.1" FT /translation="MTSLEPCRLFIYGKTERMKAYLKSAEGFFVLNKSTTIGRHENSDL FT VLQSPDIDNHHALIEYNEAECSFVLQDFNSRNGTFVNECHIQNVAVKLIPGDILRFGSA FT GLTYELVIENPPPVSFPWMRGPAPWPGPQPPRATQQPNQAPPPSHIPFHQGVQPAPMQR FT SWSQAFPRPTVVLPASHRRPVSANKEMFSFVVDDARKPPVIKQVWTNAMKLSEKSVAEG FT IPGAVPPAEIYVEEDLAQQDKDEIILLLGKEVSRLSDYEIESKYKDVIIANLQNEVAEL FT SQKVSETTTSRQNEKEISQKCQVLDEDIDAKQKEIQSLKSQISALQKGYSKVLCQTLSE FT RNSEITSLKNEGENLKRDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDH FT QLEALGSRCSVLKEELKQEDAHRELREAQEKELKLCKTQIQDMEKEMKKLRAELRKSCT FT EQSVISRTLREKSKVEEKLQEDSRRKLLQLQEMGNRESVIKINLERAVGQLEHFRSQVI FT KATYGRAKPFRDKPVTDQQLIEKITQVTEDNINFQQKKWTLQKETQLSNSKQEETTENI FT EKLRTSLDSCQACMKISCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVLRHALSWLEE FT VEQLLRDLGILPSSPNKDQVQQFSGNSAVFTAGKAAGASGREGEAERGEARARGEAQSQ FT NQATDGREGGKALEEYITQERNRAKETLEEERKRMQELESLLAQQKKALAKSITQEKNR FT VKEALEEEQTRVQELEERLARQKEVLESSIAH" FT mRNA join(AL391094.12:39703..39826,AL391094.12:44202..44308, FT 15598819..15599025,AL031283.26:9050..9317, FT AL031283.26:16281..16444,AL031283.26:28264..28387, FT AL031283.26:32708..32838,AL031283.26:36029..36118, FT AL031283.26:37475..37579,AL031283.26:46710..46793, FT AL031283.26:47928..48080,AL031283.26:48997..49192, FT AL031283.26:59132..59202,AL031283.26:61387..61539, FT AL031283.26:64734..64841,AL031283.26:65067..>65090) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-006" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AK057963.1" FT /note="match: ESTs: Em:AL704167.1 Em:BX279715.1 FT Em:BX489462.1" FT misc_feature 15606846..15782809 FT /note="annotated region of clone" FT misc_feature 15606846 FT /note="Clone_left_end: RP3-467K16" FT mRNA join(15613541..15613653,15615895..15616137) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-014" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:AA460753.1" FT CDS join(15623194..15623289,15635109..15635232, FT 15639553..15639683,15642874..15642963,15644320..15644424, FT 15653555..15653638,15654773..15654925,15655842..15656037, FT 15665977..15666047,15668232..15668384,15671579..15671686, FT 15671912..>15671935) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-006" FT /standard_name="OTTHUMP00000002114" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /protein_id="CAI21423.1" FT /translation="MKLSEKSVAEGIPGAVPPAEIYVEEDLAQQDKISALQKGYSKVLC FT QTLSERNSEITSLKNEGENLKRDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQN FT KDKDHQLEALGSRCSVLKEELKQEDAHRELREAQEKELKLCKTQIQDMEKEMKKLRAEL FT RKSCTEQSVISRTLREKSKLEHFRSQVIKATYGRAKPFRDKPVTDQQLIEKITQVTEDN FT INFQQKKWTLQKETQLSNSKQEETTENIEKLRTSLDSCQACMKISCCSHDLKKEVDLLQ FT HLQVSPPVSGLQKVVLDVLRHALSWLEEVEQLLRDLGILPSSPNKGFSLYLIYLLEHYK FT KLMSQAQELQIKFNSSQETQQSLLQEKLREHLAEKEKLNEERLEQEEKLKAKIRQLTEE FT KAALEEYITQERNRAKETLEEERKRMQELESLLAQQKKALAKSITQ" FT mRNA join(15632257..15632315,15635109..15635232, FT 15639553..15639683,15642874..15642963,15644320..15644424, FT 15650948..15651055,15653555..15653638,15654773..15654925, FT 15655842..15656555) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-012" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:BM020138.1 Em:BM910570.1 FT Em:BQ014411.1 Em:BQ434769.1" FT mRNA join(15632258..15632315,15635109..15635232, FT 15639553..15639683,15642874..15642963,15644320..15644424, FT 15653555..15653638,15654773..15654925,15655842..15656107) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-011" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:BM811207.1 Em:BM913550.1" FT mRNA join(15632276..15632315,15635109..15635232, FT 15639553..15639683,15653555..15653638,15654773..15654925, FT 15655842..15656094) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-013" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:BE274861.1" FT CDS join(15632283..15632315,15635109..15635232, FT 15639553..15639683,15642874..15642963,15644320..15644424, FT 15653555..15653638,15654773..15654925,15655842..15656072) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-011" FT /standard_name="OTTHUMP00000002116" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /protein_id="CAI21424.1" FT /translation="MILRPPRPCGTISALQKGYSKVLCQTLSERNSEITSLKNEGENLK FT RDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDHQLEALGSRCSVLKEEL FT KQEDAHRELREAQEKELKLCKTQIQDMEKEMKKLRAELRKSCTEQSVISRTLREKSKLE FT HFRSQVIKATYGRAKPFRDKPVTDQQLIEKITQVTEDNINFQQKKWTLQKETQLSNSKQ FT EETTENIEKLRTSLDSCQACMKISCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVLRH FT ALSWLEEVEQLLRDLGILPSSPNKGYWDFFSHMVA" FT CDS join(15632283..15632315,15635109..15635232, FT 15639553..15639683,15642874..15642963,15644320..15644424, FT 15650948..15651055,15653555..15653638,15654773..15654925, FT 15655842..15656072) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-012" FT /standard_name="OTTHUMP00000002117" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /protein_id="CAI21425.1" FT /translation="MILRPPRPCGTISALQKGYSKVLCQTLSERNSEITSLKNEGENLK FT RDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDHQLEALGSRCSVLKEEL FT KQEDAHRELREAQEKELKLCKTQIQDMEKEMKKLRAELRKSCTEQSVISRTLREKSKVE FT EKLQEDSRRKLLQLQEMGNRESVIKINLERAVGQLEHFRSQVIKATYGRAKPFRDKPVT FT DQQLIEKITQVTEDNINFQQKKWTLQKETQLSNSKQEETTENIEKLRTSLDSCQACMKI FT SCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVLRHALSWLEEVEQLLRDLGILPSSPN FT KGYWDFFSHMVA" FT CDS join(15632283..15632315,15635109..15635232, FT 15639553..15639683,15653555..15653638,15654773..15654925, FT 15655842..15656072) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-013" FT /standard_name="OTTHUMP00000002118" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /protein_id="CAI21426.1" FT /translation="MILRPPRPCGTISALQKGYSKVLCQTLSERNSEITSLKNEGENLK FT RDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDHQLEALGSRLEHFRSQV FT IKATYGRAKPFRDKPVTDQQLIEKITQVTEDNINFQQKKWTLQKETQLSNSKQEETTEN FT IEKLRTSLDSCQACMKISCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVLRHALSWLE FT EVEQLLRDLGILPSSPNKGYWDFFSHMVA" FT mRNA join(AL391094.12:29000..29192,AL391094.12:44202..44308, FT AL158174.8:21079..21285,15615895..15616162, FT 15623180..15623289,15627701..15627937,15635109..15635232, FT 15639553..15639683,15642874..15642963,15644320..15644424, FT 15650948..15651055,15653555..15653638,15654773..15654925, FT 15655842..15656037,15668232..15668389,15671579..15671686, FT 15671912..15672019,15675538..>15675562) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-005" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AK093300.1 Em:AX748041.1" FT /note="match: ESTs: Em:BQ082346.1" FT CDS join(AL391094.12:29156..29192,AL391094.12:44202..44308, FT AL158174.8:21079..21285,15615895..15616162, FT 15623180..15623289,15627701..15627937,15635109..15635232, FT 15639553..15639683,15642874..15642963,15644320..15644424, FT 15650948..15651055,15653555..15653638,15654773..15654925, FT 15655842..15656037,15668232..15668389,15671579..15671686, FT 15671912..15672019,15675538..>15675562) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-005" FT /standard_name="OTTHUMP00000002115" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: proteins: Tr:Q8BLA4 Tr:Q8NA05" FT /protein_id="CAI21427.1" FT /translation="MTSLEPCRLFIYGKTERMKAYLKSAEGFFVLNKSTTIGRHENSDL FT VLQSPDIDNHHALIEYNEAECSFVLQDFNSRNGTFVNECHIQNVAVKLIPGDILRFGSA FT GLTYELVIENPPPVSFPWMRGPAPWPGPQPPRATQQPNQAPPPSHIPFHQGVQPAPMQR FT SWSQAFPRPTVVLPASHRRPVSANKEMFSFVVDDARKPPVIKQVWTNAMKLSEKSVAEG FT IPGAVPPAEIYVEEDLAQQDKDEIILLLGKEVSRLSDYEIESKYKDVIIANLQNEVAEL FT SQKVSETTTSRQNEKEISQKCQVLDEDIDAKQKEIQSLKSQISALQKGYSKVLCQTLSE FT RNSEITSLKNEGENLKRDNAITSGMVSSLQKDILAKDEQVQQLKEEVSHLKSQNKDKDH FT QLEALGSRCSVLKEELKQEDAHRELREAQEKELKLCKTQIQDMEKEMKKLRAELRKSCT FT EQSVISRTLREKSKVEEKLQEDSRRKLLQLQEMGNRESVIKINLERAVGQLEHFRSQVI FT KATYGRAKPFRDKPVTDQQLIEKITQVTEDNINFQQKKWTLQKETQLSNSKQEETTENI FT EKLRTSLDSCQACMKISCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVLRHALSWLEE FT VEQLLRDLGILPSSPNKDQVQQFSGNSAVFTAGKAAGASGREGEAERGEARARGEAQSQ FT NQATDGREGGKALEEYITQERNRAKETLEEERKRMQELESLLAQQKKALAKSITQEKNR FT VKEALEEEQTRVQELEERLARQKEVLESSIAH" FT mRNA join(15638601..15638683,15639553..15639683, FT 15640938..15641094,15641543..15641735) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-010" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:CA429996.1" FT misc_feature 15641132 FT /note="Tandem repeat. Forced join. Restriction digest data FT (BAMHI, HINDIII) suggest around 250 base pairs are missing FT from this repeat region" FT mRNA join(AL391094.12:39703..39826,AL391094.12:44202..44308, FT AL158174.8:21079..21285,15615895..15616162, FT 15623126..15623289,15635109..15635232,15639553..15639683, FT 15642874..15642963,15644320..15644424,15653555..15653638, FT 15654773..15654925,15655842..15656037,15665977..15666047, FT 15668232..15668384,15671579..15671686,15671912..>15671935) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-006" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AK057963.1" FT /note="match: ESTs: Em:AL704167.1 Em:BX279715.1 FT Em:BX489462.1" FT mRNA join(15650965..15653638,15654773..15656504) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-009" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:BX641070.1" FT mRNA join(15653313..15653638,15654773..15654925, FT 15655842..15656230) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-015" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:BG332108.1" FT mRNA join(15653616..15653638,15654773..15654925, FT 15655842..15656037,15665977..15666047,15668232..15668389, FT 15671579..15671686,15671912..15672019,15675538..15675645, FT 15679373..15679480,15684606..15684779,15686974..15687199, FT 15689138..15689222,15692323..15692429,15693959..15694118, FT 15695866..15695998,15701001..15701127,15702099..15702226, FT 15707197..15707292,15707727..15707947,15708524..15708689, FT 15709652..15709898,15714547..15714627,15717706..15717759, FT 15723793..15724012) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-003" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:CB240780.1" FT /note="match: cDNAs: Em:AL833342.1" FT polyA_site 15656555 FT mRNA complement(join(15660662..15661195,15661768..15661960)) FT /locus_tag="RP3-467K16.7-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ009088.1" FT CDS join(<15668257..15668384,15671579..15671686, FT 15671912..15672019,15679373..15679480,15684606..15684779, FT 15686974..15687199,15689138..15689222,15692323..15692429, FT 15693959..15694118,15695866..15695998,15700998..15701127, FT 15702099..15702226,15707197..15707292,15707727..15707947, FT 15708524..15708689,15709652..15709654) FT /codon_start=3 FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-004" FT /standard_name="OTTHUMP00000002113" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /protein_id="CAI21428.1" FT /translation="QQSLLQEKLREHLAEKEKLNEERLEQEEKLKAKIRQLTEEKAALE FT EYITQERNRAKETLEEERKRMQELESLLAQQKKALAKSITQEKNRVKEALEEEQTRVQE FT LEERLARQKEISESNIAYEKRKAKEAMEKEKKKVQDLENRLTKQKEELELKEQKEDVLN FT NKLSDALAMVEETQKTKATESLKAESLALKLNETLAELETTKTKMIMVEERLILQQKMV FT KALQDEQESQRHGFEEEIMEYKEQIKQHAQTIVSLEEKLQKVTQHHKKIEGEIATLKDN FT DPAPKEERPQDPLVAPMTESSAKDMAYEHLIDDLLAAQKEILSQQEVIMKLRKDLTEAH FT SRMSDLRGELNEKQKMELEQNVVLVQQQSKELSVLKEKMAQMSSLVEKKDRELKALEEA FT LRASQEKHRLQLNTEKEQKPRKKTQTCDTSVQIEPVHTEAFSSSQEQQSFSDLGVRCKG FT SRHEEVIQRQKKALSELRARIKELEKARSPDHKDHQNESFLDLKNLRMENNVQKILLDA FT KPDLPTLSRIEILAPQNGLCNARFGSAMEKSGKMDVAEALELSEKLYLDMSKTLGSLMN FT IKNMSGHVSMKYLSRQEREKVNQLRQRDLDLVFDKITQLKNQLGRKEELLRGYEKDVEQ FT LRRSKVSIEMYQSQVAKLEDDIYKEAEEKALLKEALERMEHQLCQEKRINRAIRQQK" FT mRNA join(<15668257..15668384,15671579..15671686, FT 15671912..15672019,15679373..15679480,15684606..15684779, FT 15686974..15687199,15689138..15689222,15692323..15692429, FT 15693959..15694118,15695866..15695998,15700998..15701127, FT 15702099..15702226,15707197..15707292,15707727..15707947, FT 15708524..15708689,15709652..15711054) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-004" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AB067524.1" FT mRNA complement(join(15653176..15656179,15670272..15670372)) FT /gene="RP3-467K16.2" FT /locus_tag="RP3-467K16.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK055853.1" FT CDS join(<15671927..15672019,15679373..15679480, FT 15684606..15684779,15686974..15687199,15689138..15689222, FT 15692323..15692429,15693959..15694118,15695866..15695998, FT 15700998..15701127,15702099..15702226,15707197..15707292, FT 15707727..15707947,15708524..15708689,15723793..15723909) FT /codon_start=1 FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-001" FT /standard_name="OTTHUMP00000002111" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /protein_id="CAI21429.1" FT /translation="ITQEKNRVKEALEEEQTRVQELEERLARQKEISESNIAYEKRKAK FT EAMEKEKKKVQDLENRLTKQKEELELKEQKEDVLNNKLSDALAMVEETQKTKATESLKA FT ESLALKLNETLAELETTKTKMIMVEERLILQQKMVKALQDEQESQRHGFEEEIMEYKEQ FT IKQHAQTIVSLEEKLQKVTQHHKKIEGEIATLKDNDPAPKEERPQDPLVAPMTESSAKD FT MAYEHLIDDLLAAQKEILSQQEVIMKLRKDLTEAHSRMSDLRGELNEKQKMELEQNVVL FT VQQQSKELSVLKEKMAQMSSLVEKKDRELKALEEALRASQEKHRLQLNTEKEQKPRKKT FT QTCDTSVQIEPVHTEAFSSSQEQQSFSDLGVRCKGSRHEEVIQRQKKALSELRARIKEL FT EKARSPDHKDHQNESFLDLKNLRMENNVQKILLDAKPDLPTLSRIEILAPQNGLCNARF FT GSAMEKSGKMDVAEALELSEKLYLDMSKTLGSLMNIKNMSGHVSMKYLSRQEREKVNQL FT RQRDLDLVFDKITQLKNQLGRKEELLRGYEKDVEQLRRSKVSIEMYQSQVAKLEDDIYK FT EAEEKALLKEALERMEHQLCQEKRINRAIRQQKVGTRKASLKMDQEREMLRKETSSKSS FT QSLLHSKPSGKY" FT mRNA join(<15671927..15672019,15679373..15679480, FT 15684606..15684779,15686974..15687199,15689138..15689222, FT 15692323..15692429,15693959..15694118,15695866..15695998, FT 15700998..15701127,15702099..15702226,15707197..15707292, FT 15707727..15707947,15708524..15708689,15723793..15724622) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-001" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:AW082149.1" FT /note="match: cDNAs: Em:AK093883.1 Em:AX748350.1" FT mRNA join(15684287..15684779,15686974..15687199, FT 15689138..15689222,15690237..15690813) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-007" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:BC015238.1" FT mRNA join(<15689193..15689222,15692323..15692429, FT 15693959..15694118,15695866..15695998,15700998..15701127, FT 15702099..15702226,15707197..15707292,15707727..15707947, FT 15708524..15708689,15710303..15710426,15714547..15714627, FT 15714842..15714918,15717706..15717759,15723793..15724623) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-002" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:AK096961.1" FT mRNA join(15702196..15702226,15707197..15707292, FT 15707727..15707947,15708524..15708689,15714547..15714627, FT 15714842..15714918,15719596..15719713,15723793..15723945, FT 15726450..15726779) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-008" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: cDNAs: Em:BC027293.1 Em:BC027293.2" FT mRNA join(15707776..15707947,15708524..15708689, FT 15709655..15709776,15723793..15724025) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-016" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:CA429953.1" FT mRNA join(15709873..15709898,15710303..15710357, FT 15717706..15717759,15723793..15724025) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-018" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:AW450787.1" FT misc_feature 15714832 FT /note="Tandem repeat. Forced join. Restriction digest data FT (ECORI) suggest nothing missing from the assembly of this FT repeat region" FT mRNA join(15717643..15717759,15723793..15723945, FT 15726593..15726779) FT /gene="FHAD1" FT /locus_tag="RP3-467K16.1-017" FT /product="forkhead-associated (FHA) phosphopeptide binding FT domain 1" FT /note="match: ESTs: Em:AI923455.1" FT polyA_site 15724025 FT polyA_site 15726779 FT polyA_site complement(15729475) FT polyA_signal complement(15729491..15729496) FT mRNA complement(join(15729475..15734403,15735566..15735667, FT 15735783..15735929)) FT /locus_tag="RP3-467K16.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI559678.1" FT /note="match: cDNAs: Em:BC045184.1" FT mRNA join(15736391..15736775,15752367..15752514, FT 15753646..15753780,15755089..15756839) FT /gene="EFHD2" FT /locus_tag="RP3-467K16.3-001" FT /product="EF-hand domain family, member D2" FT /note="match: ESTs: Em:AA412527.1 Em:AI624416.1 FT Em:AW089933.1 Em:AW510635.1 Em:BG324278.1 Em:BI460106.1 FT Em:BM768993.1 Em:BM827267.1 Em:BQ051206.1 Em:BQ689915.1 FT Em:BQ918516.1 Em:BU148446.1 Em:BU157911.1 Em:BX396406.1 FT Em:BX397591.1 Em:CA306617.1 Em:CA307720.1 Em:CD675109.1" FT /note="match: cDNAs: Em:BC003033.1 Em:BC013648.1 FT Em:BC014923.1 Em:BC023611.1" FT CDS join(15736468..15736775,15752367..15752514, FT 15753646..15753780,15755089..15755220) FT /gene="EFHD2" FT /locus_tag="RP3-467K16.3-001" FT /standard_name="OTTHUMP00000002319" FT /product="EF-hand domain family, member D2" FT /note="match: proteins: Sw:Q96C19 Sw:Q9D8Y0 Tr:Q8C845" FT /protein_id="CAI21431.1" FT /translation="MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEAA FT EALGSADCELSAKLLRRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQY FT DAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKAAAG FT ELQEDSGLCVLARLSEIDVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEERKKQA FT EEMKQRKAAFKELQSTFK" FT CDS join(<15736761..15736775,15752367..15752514, FT 15753646..15753780,15754394..15754505,15755089..15755216) FT /codon_start=2 FT /gene="EFHD2" FT /locus_tag="RP3-467K16.3-002" FT /standard_name="OTTHUMP00000002320" FT /product="EF-hand domain family, member D2" FT /protein_id="CAI21432.1" FT /translation="KMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDED FT FDSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSSEGVKGAKSFFEAKWNWVC FT RWAPRTGSRGSGWQQLERLPSSALALQQPQNIGPGHQRVQPLRGGDQGRAGGKEEAGGG FT DEAAESGLQGAAVHL" FT mRNA join(<15736761..15736775,15752367..15752514, FT 15753646..15753780,15754394..15754505,15755089..15755577) FT /gene="EFHD2" FT /locus_tag="RP3-467K16.3-002" FT /product="EF-hand domain family, member D2" FT /note="match: ESTs: Em:BG775636.1 Em:BM044488.1 FT Em:BM046768.1 Em:BQ958968.1" FT polyA_signal 15756682..15756687 FT polyA_site 15756704 FT polyA_signal 15756816..15756821 FT polyA_site 15756839 FT mRNA join(15764935..15765000,15766796..15766887, FT 15766989..15767086,15768943..15769068,15769914..15770050, FT 15771101..15771246,15772092..15772244,15773070..15773149) FT /gene="CTRC" FT /locus_tag="RP3-467K16.5-001" FT /product="chymotrypsin C (caldecrin)" FT /note="match: ESTs: Em:AA363469.1 Em:AA921393.1 FT Em:AW583512.1 Em:BI832476.1 Em:BM314678.1 Em:BQ631939.1 FT Em:BU784526.1 Em:BU788199.1 Em:BU951407.1 Em:BX497888.1 FT Em:CA777104.1 Em:CA777367.1" FT /note="match: cDNAs: Em:BC015118.1 Em:S82198.1 Em:Y13697.1" FT mRNA join(15764949..15765000,15768943..15769068, FT 15769914..15770035) FT /gene="CTRC" FT /locus_tag="RP3-467K16.5-003" FT /product="chymotrypsin C (caldecrin)" FT /note="match: ESTs: Em:BI767837.1" FT CDS join(15764961..15765000,15766796..15766887, FT 15766989..15767086,15768943..15769068,15769914..15770050, FT 15771101..15771246,15772092..15772244,15773070..15773084) FT /gene="CTRC" FT /locus_tag="RP3-467K16.5-001" FT /standard_name="OTTHUMP00000002321" FT /product="chymotrypsin C (caldecrin)" FT /note="match: proteins: Sw:P55091 Sw:Q99895" FT /protein_id="CAB77355.1" FT /translation="MLGITVLAALLACASSCGVPSFPPNLSARVVGGEDARPHSWPWQI FT SLQYLKNDTWRHTCGGTLIASNFVLTAAHCISNTRTYRVAVGKNNLEVEDEEGSLFVGV FT DTIHVHKRWNALLLRNDIALIKLAEHVELSDTIQVACLPEKDSLLPKDYPCYVTGWGRL FT WTNGPIADKLQQGLQPVVDHATCSRIDWWGFRVKKTMVCAGGDGVISACNGDSGGPLNC FT QLENGSWEVFGIVSFGSRRGCNTRKKPVVYTRVSAYIDWINEKMQL" FT mRNA join(15766846..15766887,15766989..15767086, FT 15768943..15769068,15769914..15770050,15772092..15772244, FT 15773070..15773149) FT /gene="CTRC" FT /locus_tag="RP3-467K16.5-002" FT /product="chymotrypsin C (caldecrin)" FT /note="match: ESTs: Em:BQ632465.1" FT polyA_signal 15773125..15773130 FT polyA_site 15773149 FT misc_feature 15782809 FT /note="Clone_right_end: RP3-467K16" FT misc_feature 15782810..15862419 FT /note="annotated region of clone" FT mRNA join(15783223..15783288,15783581..15783669, FT 15788056..15788153,15789228..15789506) FT /gene="RP11-265F14.1" FT /locus_tag="RP11-265F14.1-002" FT /product="elastase 2A (ELA2A)" FT /note="match: ESTs: Em:BX498360.1" FT mRNA join(15783224..15783288,15783581..15783669, FT 15788056..15788153,15789228..15789356,15789881..15790017, FT 15792494..15792639,15793881..15794033,15798485..15798586) FT /gene="RP11-265F14.1" FT /locus_tag="RP11-265F14.1-001" FT /product="elastase 2A (ELA2A)" FT /note="match: ESTs: Em:AA835333.1 Em:AA844853.1 FT Em:AA844957.1 Em:AA844989.1 Em:AA845056.1 Em:AW583142.1 FT Em:AW874472.1 Em:BE969643.1 Em:BE970032.1 Em:BM503935.1 FT Em:BQ787677.1 Em:BX103870.1" FT /note="match: cDNAs: Em:BC007031.1 Em:D00236.1 Em:M16631.1 FT Em:M16652.1" FT mRNA join(15783242..15783288,15783581..15784118) FT /gene="RP11-265F14.1" FT /locus_tag="RP11-265F14.1-003" FT /product="elastase 2A (ELA2A)" FT /note="match: ESTs: Em:BE969830.1" FT CDS join(15783249..15783288,15783581..15783669, FT 15788056..15788153,15789228..15789356,15789881..15790017, FT 15792494..15792639,15793881..15794033,15798485..15798502) FT /gene="RP11-265F14.1" FT /locus_tag="RP11-265F14.1-001" FT /standard_name="OTTHUMP00000002326" FT /product="elastase 2A (ELA2A)" FT /note="match: proteins: Sw:P08217" FT /protein_id="CAC42421.1" FT /translation="MIRTLLLSTLVAGALSCGDPTYPPYVTRVVGGEEARPNSWPWQVS FT LQYSSNGKWYHTCGGSLIANSWVLTAAHCISSSRTYRVGLGRHNLYVAESGSLAVSVSK FT IVVHKDWNSNQISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRL FT QTNGAVPDVLQQGRLLVVDYATCSSSAWWGSSVKTSMICAGGDGVISSCNGDSGGPLNC FT QASDGRWQVHGIVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVIANN" FT mRNA join(15792404..15792639,15793881..15794033, FT 15802952..15803040,15807593..15807690,15808760..15808888, FT 15809759..15809863) FT /gene="RP11-265F14.2" FT /locus_tag="RP11-265F14.2-004" FT /product="pancreatic elastase IIB (ELA2B)" FT /note="match: ESTs: Em:BF305072.1 Em:BG826741.1" FT polyA_signal 15798562..15798567 FT polyA_site 15798586 FT mRNA join(15802596..15802660,15802952..15803040, FT 15807593..15807690,15808760..15808888,15809759..15809895, FT 15812396..15812541,15813780..15813932,15817790..15817895) FT /gene="RP11-265F14.2" FT /locus_tag="RP11-265F14.2-001" FT /product="pancreatic elastase IIB (ELA2B)" FT /note="match: ESTs: Em:AW583137.1 Em:BG655883.1 FT Em:BM352870.1 Em:BM503838.1 Em:CA866278.1 Em:CA942521.1" FT /note="match: cDNAs: Em:M16653.1" FT CDS join(15802621..15802660,15802952..15803040, FT 15807593..15807690,15808760..15808888,15809759..15809895, FT 15812396..15812541,15813780..15813932,15817790..15817807) FT /gene="RP11-265F14.2" FT /locus_tag="RP11-265F14.2-001" FT /standard_name="OTTHUMP00000002327" FT /product="pancreatic elastase IIB (ELA2B)" FT /note="match: proteins: Sw:P08218" FT /protein_id="CAC42422.1" FT /translation="MIRTLLLSTLVAGALSCGVSTYAPDMSRMLGGEEARPNSWPWQVS FT LQYSSNGQWYHTCGGSLIANSWVLTAAHCISSSGIYRVMLGQHNLYVAESGSLAVSVSK FT IVVHKDWNSDQVSKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRL FT QTNGALPDDLKQGQLLVVDYATCSSSGWWGSTVKTNMICAGGDGVICTCNGDSGGPLNC FT QASDGRWEVHGIGSLTSVLGCNYYYKPSIFTRVSNYNDWINSVIANN" FT mRNA join(<15802960..15803040,15807593..15807690, FT 15808140..15808244,15808760..>15808852) FT /gene="RP11-265F14.2" FT /locus_tag="RP11-265F14.2-002" FT /product="pancreatic elastase IIB (ELA2B)" FT /note="match: ESTs: Em:CA952282.1 Em:CB068974.1" FT CDS join(<15802960..15803040,15807593..15807690, FT 15808140..15808244,15808760..>15808852) FT /codon_start=1 FT /gene="RP11-265F14.2" FT /locus_tag="RP11-265F14.2-002" FT /standard_name="OTTHUMP00000002328" FT /product="pancreatic elastase IIB (ELA2B)" FT /protein_id="CAI12970.1" FT /translation="CGVSTYAPDMSRMLGGEEARPNSWPWQVSLQYSSNGQWYHTCGGS FT LIANSWVLTAAHCIRQIIKAHKVLQRCSLILFFVRDLCSSQLELTGVSAGSSGIYRVML FT GQHNLYVAESGSLAVSVSKIVV" FT mRNA join(15812356..15812541,15813780..15813932, FT 15817790..15817890) FT /gene="RP11-265F14.2" FT /locus_tag="RP11-265F14.2-003" FT /product="pancreatic elastase IIB (ELA2B)" FT /note="match: ESTs: Em:CA943777.1 Em:CA949962.1" FT polyA_signal 15817869..15817874 FT polyA_site 15817895 FT polyA_site complement(15818765) FT polyA_signal complement(15818787..15818792) FT misc_feature 15825303 FT /note="Clone_right_end: RP11-301D22" FT mRNA complement(join(15819293..15819530,15820387..15820496, FT 15831106..15831253,15832485..15832574,15833394..>15833547)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-007" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: ESTs: Em:BG820052.1" FT CDS complement(join(15819438..15819530,15820387..15820496, FT 15831106..15831253,15832485..15832574,15833394..>15833547)) FT /codon_start=2 FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-007" FT /standard_name="OTTHUMP00000033239" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /protein_id="CAI12971.1" FT /translation="CGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVK FT GDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKI FT VNIFNGTSCPSLGGKPKLFFIQACGGGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQS FT LLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS" FT misc_feature 15837616 FT /note="Clone_left_end: RP4-680D5" FT CDS complement(join(<15821768..15821947,15831106..15831253, FT 15832485..15832574,15833394..15833570,15834368..15834402, FT 15844605..15844773)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-003" FT /standard_name="OTTHUMP00000002324" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /protein_id="CAI12972.1" FT /translation="MLASFLRTNRQAAKLSKPTLENLTPVVLRPEIRKPEVLRPETPRP FT VDIGSGGFGDVGALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDC FT EKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQF FT PGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPED FT ESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFP" FT mRNA complement(join(15818765..15819530,15820387..15820496, FT 15821768..15821947,15831106..15831253,15832485..15832574, FT 15833394..15833570,15834368..15834402,15844605..15844890, FT 15850564..15850790)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-001" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: ESTs: Em:AA922028.1 Em:AI074299.1 FT Em:AL045900.1 Em:AW237397.1 Em:BE315175.1 Em:BE397303.1 FT Em:BE962426.2 Em:BG576197.1 Em:BI223119.1 Em:BI225184.1 FT Em:BQ923313.1 Em:CB992535.1 Em:CB996888.1" FT /note="match: cDNAs: Em:BC002452.1 Em:BC006463.1 FT Em:BT006911.1 Em:U56390.1 Em:U60521.1" FT CDS complement(join(15819438..15819530,15820387..15820496, FT 15821768..15821947,15831106..15831253,15832485..15832574, FT 15833394..15833570,15834368..15834402,15844605..15844890, FT 15850564..15850695)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-001" FT /standard_name="OTTHUMP00000002322" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: proteins: Sw:P55211 Tr:Q53Y70" FT /protein_id="CAC42423.1" FT /translation="MDEADRRLLRRCRLRLVEELQVDQLWDALLSRELFRPHMIEDIQR FT AGSGSRRDQARQLIIDLETRGSQALPLFISCLEDTGQDMLASFLRTNRQAAKLSKPTLE FT NLTPVVLRPEIRKPEVLRPETPRPVDIGSGGFGDVGALESLRGNADLAYILSMEPCGHC FT LIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQ FT DHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKL FT FFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSD FT IFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQ FT MPGCFNFLRKKLFFKTS" FT mRNA complement(join(15818765..15819530,15820387..15820496, FT 15821768..15821947,15844605..15844890,15850564..15850716)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-002" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: ESTs: Em:BI917769.1" FT /note="match: cDNAs: Em:AB015653.1 Em:AB020979.1 FT Em:AF093130.1 Em:AF110376.1" FT CDS complement(join(15819438..15819530,15820387..15820496, FT 15821768..15821947,15844605..15844890,15850564..15850695)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-002" FT /standard_name="OTTHUMP00000002323" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /protein_id="CAI12973.1" FT /translation="MDEADRRLLRRCRLRLVEELQVDQLWDALLSRELFRPHMIEDIQR FT AGSGSRRDQARQLIIDLETRGSQALPLFISCLEDTGQDMLASFLRTNRQAAKLSKPTLE FT NLTPVVLRPEIRKPEVLRPETPRPVDIGSGGFGDVEQKDHGFEVASTSPEDESPGSNPE FT PDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFE FT QWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS" FT mRNA complement(join(<15831120..15831253,15833394..15833570, FT 15834368..15834402,15844605..15844890,15850564..15850712)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-005" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: ESTs: Em:AU125938.1" FT CDS complement(join(<15831120..15831253,15833394..15833570, FT 15834368..15834402,15844605..15844890,15850564..15850695)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-005" FT /standard_name="OTTHUMP00000002325" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /protein_id="CAI12974.1" FT /translation="MDEADRRLLRRCRLRLVEELQVDQLWDALLSRELFRPHMIEDIQR FT AGSGSRRDQARQLIIDLETRGSQALPLFISCLEDTGQDMLASFLRTNRQAAKLSKPTLE FT NLTPVVLRPEIRKPEVLRPETPRPVDIGSGGFGDVGALESLRGNADLAYILSMEPCGHC FT LIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKASHLQFPGAVYG FT TDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFI" FT mRNA complement(join(15831109..15831253,15832485..15832574, FT 15833394..15833628,15834368..15834402,15844605..15844890, FT 15850564..15850687)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-006" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: ESTs: Em:BX345517.1" FT mRNA complement(join(<15821768..15821947,15831106..15831253, FT 15832485..15832574,15833394..15833570,15834368..15834402, FT 15844605..15844890,15851347..15851384)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-003" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: ESTs: Em:BX379281.1" FT mRNA complement(join(15844631..15844890,15846376..15846496, FT 15852686..15853029)) FT /gene="CASP9" FT /locus_tag="RP11-265F14.3-004" FT /product="caspase 9, apoptosis-related cysteine peptidase" FT /note="match: ESTs: Em:BM013910.1" FT mRNA join(15853308..15853453,15855583..15855767, FT 15860732..15860798,AL121992.24:651..990, FT AL121992.24:8575..8759,AL121992.24:10943..11047, FT AL121992.24:12446..12604,AL121992.24:23702..23832, FT AL121992.24:26318..26501,AL121992.24:28105..28287, FT AL121992.24:28459..28535,AL121992.24:30095..30175, FT AL121992.24:30258..30771) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-002" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: cDNAs: Em:AK091848.1 Em:AX747219.1" FT mRNA join(15853308..15853453,15855583..15855767, FT 15860732..15860798,AL121992.24:651..990, FT AL121992.24:8575..8759,AL121992.24:10943..11047, FT AL121992.24:12446..12604,AL121992.24:23702..23832, FT AL121992.24:26318..26501,AL121992.24:28105..28287, FT AL121992.24:28459..28535,AL121992.24:30095..30175, FT AL121992.24:30258..30356,AL121992.24:31275..31445, FT AL121992.24:31954..35909) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-001" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: ESTs: Em:AA761756.1 Em:AI433591.1 FT Em:AU123176.1 Em:AU140524.1 Em:AW004774.1 Em:BE551311.1 FT Em:BF090051.1 Em:BF110146.1 Em:BG150056.1 Em:BG674919.1 FT Em:BI462435.1 Em:BM663780.1 Em:BQ082439.1 Em:BX504616.1 FT Em:BX644212.1" FT /note="match: cDNAs: Em:AB023179.2 Em:AK022530.1 FT Em:AK023805.1 Em:BC031991.1 Em:BC047363.1" FT mRNA join(15853308..15853453,15855583..15855767, FT 15860732..15860798,AL121992.24:651..990, FT AL121992.24:8575..8759,AL121992.24:10943..11047, FT AL121992.24:12446..12604,AL121992.24:23702..23832, FT AL121992.24:26318..26501,AL121992.24:28105..28287, FT AL121992.24:28459..28535,AL121992.24:30095..30175, FT AL121992.24:30258..30586,AL121992.24:31275..31445, FT AL121992.24:31954..35909) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-003" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: cDNAs: Em:AL833299.1" FT mRNA join(15853308..15853453,15855583..15855767, FT 15860732..15860798,AL121992.24:651..990, FT AL121992.24:8575..8759,AL121992.24:10943..11047, FT AL121992.24:12446..12604,AL121992.24:23702..23832, FT AL121992.24:26318..26501,AL121992.24:28105..28287, FT AL121992.24:28459..28535,AL121992.24:30095..30175, FT AL121992.24:30258..30356,AL121992.24:31275..31445, FT AL121992.24:38936..40268) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-005" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: cDNAs: Em:BX648982.1" FT CDS join(15855601..15855767,15860732..15860798, FT AL121992.24:651..990,AL121992.24:8575..8759, FT AL121992.24:10943..11047,AL121992.24:12446..12604, FT AL121992.24:23702..23832,AL121992.24:26318..26501, FT AL121992.24:28105..28287,AL121992.24:28459..28535, FT AL121992.24:30095..30175,AL121992.24:30258..30366) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-002" FT /standard_name="OTTHUMP00000002469" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /protein_id="CAI12975.1" FT /translation="MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADI FT KKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQ FT QQQREYRFRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYL FT IKITSDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGII FT NGKISFFHNAVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTP FT IVPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVI FT QARGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLS FT KPFEAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGR FT VVYKTLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSA FT SDYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEA FT QEKTGKTEPSFTKENSRFL" FT CDS join(15855601..15855767,15860732..15860798, FT AL121992.24:651..990,AL121992.24:8575..8759, FT AL121992.24:10943..11047,AL121992.24:12446..12604, FT AL121992.24:23702..23832,AL121992.24:26318..26501, FT AL121992.24:28105..28287,AL121992.24:28459..28535, FT AL121992.24:30095..30175,AL121992.24:30258..30356, FT AL121992.24:31275..31445,AL121992.24:31954..32353) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-001" FT /standard_name="OTTHUMP00000002468" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: proteins: Sw:Q80TN4 Sw:Q9Y2G8" FT /protein_id="CAI12976.1" FT /translation="MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADI FT KKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQ FT QQQREYRFRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYL FT IKITSDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGII FT NGKISFFHNAVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTP FT IVPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVI FT QARGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLS FT KPFEAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGR FT VVYKTLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSA FT SDYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEA FT QEKTGKTEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKT FT SLLQKFALEVYTFTGSSCLHFSFLSLDKHREWLEYLLEFAQDAAPIPNQYDKHFMERDY FT TGYVLALNGHKKYFCLFKPQKTVEEEEAIGSCSDVDSSLYLGESRGKPSCGLGSRPIKG FT KLSKLSLWMERLLEGSLQRFYIPSWPELD" FT CDS join(15855601..15855767,15860732..15860798, FT AL121992.24:651..990,AL121992.24:8575..8759, FT AL121992.24:10943..11047,AL121992.24:12446..12604, FT AL121992.24:23702..23832,AL121992.24:26318..26501, FT AL121992.24:28105..28287,AL121992.24:28459..28535, FT AL121992.24:30095..30175,AL121992.24:30258..30356, FT AL121992.24:31275..31445,AL121992.24:38936..38954) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-005" FT /standard_name="OTTHUMP00000002471" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /protein_id="CAI12977.1" FT /translation="MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADI FT KKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQ FT QQQREYRFRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYL FT IKITSDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGII FT NGKISFFHNAVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTP FT IVPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVI FT QARGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLS FT KPFEAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGR FT VVYKTLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSA FT SDYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEA FT QEKTGKTEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKT FT SLLQKFALEVYTFTGKIIRW" FT misc_feature 15862420..16032718 FT /note="annotated region of clone" FT mRNA join(15886103..15886151,15886626..15886824, FT 15888637..15888820,15890424..15890606,15890778..15890854, FT 15891677..15891948,15892414..15892494,15892577..15892905, FT 15893594..15893764,15894273..15894730,15895272..15895466, FT 15901255..15901644,15901830..15901967,15918754..15918874) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-004" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: cDNAs: Em:AL137715.1" FT mRNA join(<15890581..15890606,15890778..15890854, FT 15892414..15892494,15892577..15892794,15893594..15893636) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-006" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: ESTs: Em:BE695779.1" FT mRNA join(15892313..15892494,15892577..15892904) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-008" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: ESTs: Em:BX491957.1" FT mRNA join(15893541..15893764,15894273..15894556) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-007" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: ESTs: Em:AI695030.1 Em:AI797125.1" FT mRNA join(15894654..15894730,15896148..15896776) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-009" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: ESTs: Em:BE746066.1" FT polyA_signal 15895654..15895659 FT polyA_site 15895679 FT polyA_signal 15898204..15898209 FT polyA_site 15898228 FT polyA_site complement(15900049) FT polyA_signal complement(15900062..15900067) FT mRNA complement(join(15898848..15900219,15901252..15901336, FT 15904180..15904359,15905354..15905549,15906589..15906637, FT 15909688..15909890,15911191..15911605)) FT /gene="AGMAT" FT /locus_tag="RP4-680D5.6-001" FT /product="agmatine ureohydrolase (agmatinase)" FT /note="match: ESTs: Em:AA934764.1 Em:AI492488.1 FT Em:AI653589.1 Em:AI671332.1 Em:AW237392.1 Em:AW611824.1 FT Em:AW771974.1 Em:BF034448.1 Em:BF476183.1 Em:BG403443.1 FT Em:BG778251.1 Em:BM423464.1 Em:BM788254.1 Em:CA454603.1 FT Em:N49567.1" FT /note="match: cDNAs: Em:AK027037.1 Em:AY057097.1 FT Em:BC005090.1" FT CDS complement(join(15900146..15900219,15901252..15901336, FT 15904180..15904359,15905354..15905549,15906589..15906637, FT 15909688..15909890,15911191..15911462)) FT /gene="AGMAT" FT /locus_tag="RP4-680D5.6-001" FT /standard_name="OTTHUMP00000002467" FT /product="agmatine ureohydrolase (agmatinase)" FT /note="match: proteins: Sw:Q90XD2 Sw:Q9BSE5 Tr:Q88EE2 FT Tr:Q8R0Z1 Tr:Q9I3S3" FT /protein_id="CAI22366.1" FT /translation="MLRLLASGCARGPGPGVGARPAAGLFHPGRRQSRQASDAPRNQPP FT SPEFVARPVGVCSMMRLPVQTSPEGLDAAFIGVPLDTGTSNRPGARFGPRRIREESVML FT GTVNPSTGALPFQSLMVADLGDVNVNLYNLQDSCRRIQEAYEKIVAAGCIPLTLGGDHT FT ITYPILQAMAKKHGPVGLLHVDAHTDTTDKALGEKLYHGAPFRRCVDEGLLDCKRVVQI FT GIRGSSTTLDPYRYNRSQGFRVVLAEDCWMKSLVPLMGEVRQQMGGKPIYISFDIDALD FT PAYAPGTGTPEIAGLTPSQALEIIRGCQGLNVMGCDLVEVSPPYDLSGNTALLAANLLF FT EMLCALPKVTTV" FT polyA_signal 15918854..15918859 FT polyA_site 15918874 FT mRNA complement(join(15912631..15914937,15929584..15930121)) FT /gene="RP4-680D5.2" FT /locus_tag="RP4-680D5.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK091499.1" FT CDS 15931092..15931538 FT /pseudo FT /locus_tag="RP4-680D5.3-001" FT /product="novel pseudogene similar to Mus musculus ethanol FT induced 6 (Etohi6)" FT /note="match: proteins: Sw:Q9D1L0 Sw:Q9Y6H1 Tr:Q8CEW7 FT Tr:Q8K3S8" FT misc_feature 15938410 FT /note="Clone_right_end: RP11-265F14" FT CDS complement(15941138..15941362) FT /pseudo FT /locus_tag="RP4-680D5.4-001" FT /product="CD24 antigen (small cell lung carcinoma cluster 4 FT antigen) (CD24) pseudogene" FT /note="match: proteins: Sw:P25063" FT mRNA join(15943995..15944303,15953164..15953293, FT 15956820..15957056,15959934..15960060,15964802..15964929, FT 15970017..15970145,15976215..15976318,15978201..15978390, FT 15983112..15983174,15986332..15995539) FT /gene="DDI2" FT /locus_tag="RP4-680D5.5-001" FT /product="DDI1, DNA-damage inducible 1, homolog 2 (S. FT cerevisiae)" FT /note="match: ESTs: Em:AI085151.1 Em:AI290591.1 FT Em:AL598343.1 Em:AW867905.1 Em:BE246849.1 Em:BM454852.1 FT Em:BQ448413.1 Em:BX282087.1 Em:CA438698.1 Em:CB118357.1" FT /note="match: cDNAs: Em:AK129015.1 Em:BC021415.1" FT mRNA join(15944038..15944303,15953164..15953293, FT 15956820..15957056,15959934..15960801) FT /gene="DDI2" FT /locus_tag="RP4-680D5.5-002" FT /product="DDI1, DNA-damage inducible 1, homolog 2 (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BC006011.1" FT CDS join(15944166..15944303,15953164..15953293, FT 15956820..15957056,15959934..15960060,15964802..15964929, FT 15970017..15970145,15976215..15976318,15978201..15978390, FT 15983112..15983128) FT /gene="DDI2" FT /locus_tag="RP4-680D5.5-001" FT /standard_name="OTTHUMP00000002491" FT /product="DDI1, DNA-damage inducible 1, homolog 2 (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q7PZQ6 Tr:Q7ZYA7 Tr:Q8WTS3 FT Tr:Q8WTU0 Tr:Q95JI3 Tr:Q95JM3 Tr:Q9DAF3" FT /protein_id="CAI22369.1" FT /translation="MLLTVYCVRRDLSEVTFSLQVDADFELHNFRALCELESGIPAAES FT QIVYAERPLTDNHRSLASYGLKDGDVVILRQKENADPRPPVQFPNLPRIDFSSIAVPGT FT SSPRQRQPPGTQQSHSSPGEITSSPQGLDNPALLRDMLLANPHELSLLKERNPPLAEAL FT LSGDLEKFSRVLVEQQQDRARREQERIRLFSADPFDLEAQAKIEEDIRQQNIEENMTIA FT MEEAPESFGQVVMLYINCKVNGHPVKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGI FT AKGVGTQKIIGRVHLAQVQIEGDFLPCSFSILEEQPMDMLLGLDMLKRHQCSIDLKKNV FT LVIGTTGSQTTFLPEGELPECARLAYGAGREDVRPEEIADQELAEALQKSAEDAERQKP FT " FT mRNA join(15956897..15957056,15959934..15960060, FT 15960293..15960374,15970017..15970145,15976215..15976318, FT 15978201..15978390,15983112..15983174,15986332..15987552) FT /gene="DDI2" FT /locus_tag="RP4-680D5.5-003" FT /product="DDI1, DNA-damage inducible 1, homolog 2 (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AK057374.1" FT mRNA join(15956920..15957056,15959934..15960060, FT 15970017..15970145,15976215..15976318) FT /gene="DDI2" FT /locus_tag="RP4-680D5.5-004" FT /product="DDI1, DNA-damage inducible 1, homolog 2 (S. FT cerevisiae)" FT /note="match: ESTs: Em:AL707355.1" FT mRNA join(AL512883.5:95203..95348,AL512883.5:97478..97662, FT AL512883.5:102627..102693,15862970..15863309, FT 15870894..15871078,15873262..15873366,15874765..15874923, FT 15886021..15886151,15888637..15888820,15890424..15890606, FT 15890778..15890854,15892414..15892494,15892577..15893090) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-002" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: cDNAs: Em:AK091848.1 Em:AX747219.1" FT mRNA join(AL512883.5:95203..95348,AL512883.5:97478..97662, FT AL512883.5:102627..102693,15862970..15863309, FT 15870894..15871078,15873262..15873366,15874765..15874923, FT 15886021..15886151,15888637..15888820,15890424..15890606, FT 15890778..15890854,15892414..15892494,15892577..15892675, FT 15893594..15893764,15894273..15898228) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-001" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: ESTs: Em:AA761756.1 Em:AI433591.1 FT Em:AU123176.1 Em:AU140524.1 Em:AW004774.1 Em:BE551311.1 FT Em:BF090051.1 Em:BF110146.1 Em:BG150056.1 Em:BG674919.1 FT Em:BI462435.1 Em:BM663780.1 Em:BQ082439.1 Em:BX504616.1 FT Em:BX644212.1" FT /note="match: cDNAs: Em:AB023179.2 Em:AK022530.1 FT Em:AK023805.1 Em:BC031991.1 Em:BC047363.1" FT mRNA join(AL512883.5:95203..95348,AL512883.5:97478..97662, FT AL512883.5:102627..102693,15862970..15863309, FT 15870894..15871078,15873262..15873366,15874765..15874923, FT 15886021..15886151,15888637..15888820,15890424..15890606, FT 15890778..15890854,15892414..15892494,15892577..15892905, FT 15893594..15893764,15894273..15898228) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-003" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: cDNAs: Em:AL833299.1" FT mRNA join(AL512883.5:95203..95348,AL512883.5:97478..97662, FT AL512883.5:102627..102693,15862970..15863309, FT 15870894..15871078,15873262..15873366,15874765..15874923, FT 15886021..15886151,15888637..15888820,15890424..15890606, FT 15890778..15890854,15892414..15892494,15892577..15892675, FT 15893594..15893764,15901255..15902587) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-005" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: cDNAs: Em:BX648982.1" FT CDS join(AL512883.5:97496..97662,AL512883.5:102627..102693, FT 15862970..15863309,15870894..15871078,15873262..15873366, FT 15874765..15874923,15886021..15886151,15888637..15888820, FT 15890424..15890606,15890778..15890854,15892414..15892494, FT 15892577..15892685) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-002" FT /standard_name="OTTHUMP00000002469" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /protein_id="CAI22370.1" FT /translation="MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADI FT KKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQ FT QQQREYRFRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYL FT IKITSDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGII FT NGKISFFHNAVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTP FT IVPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVI FT QARGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLS FT KPFEAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGR FT VVYKTLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSA FT SDYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEA FT QEKTGKTEPSFTKENSRFL" FT CDS join(AL512883.5:97496..97662,AL512883.5:102627..102693, FT 15862970..15863309,15870894..15871078,15873262..15873366, FT 15874765..15874923,15886021..15886151,15888637..15888820, FT 15890424..15890606,15890778..15890854,15892414..15892494, FT 15892577..15892675,15893594..15893764,15894273..15894672) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-001" FT /standard_name="OTTHUMP00000002468" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /note="match: proteins: Sw:Q80TN4 Sw:Q9Y2G8" FT /protein_id="CAI22371.1" FT /translation="MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADI FT KKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQ FT QQQREYRFRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYL FT IKITSDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGII FT NGKISFFHNAVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTP FT IVPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVI FT QARGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLS FT KPFEAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGR FT VVYKTLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSA FT SDYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEA FT QEKTGKTEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKT FT SLLQKFALEVYTFTGSSCLHFSFLSLDKHREWLEYLLEFAQDAAPIPNQYDKHFMERDY FT TGYVLALNGHKKYFCLFKPQKTVEEEEAIGSCSDVDSSLYLGESRGKPSCGLGSRPIKG FT KLSKLSLWMERLLEGSLQRFYIPSWPELD" FT CDS join(AL512883.5:97496..97662,AL512883.5:102627..102693, FT 15862970..15863309,15870894..15871078,15873262..15873366, FT 15874765..15874923,15886021..15886151,15888637..15888820, FT 15890424..15890606,15890778..15890854,15892414..15892494, FT 15892577..15892675,15893594..15893764,15901255..15901273) FT /gene="DNAJC16" FT /locus_tag="RP4-680D5.1-005" FT /standard_name="OTTHUMP00000002471" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 16" FT /protein_id="CAI22372.1" FT /translation="MEVRKLSISWQFLIVLVLILQILSALDFDPYRVLGVSRTASQADI FT KKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQ FT QQQREYRFRHFHENFYFDESFFHFPFNSERRDSIDEKYLLHFSHYVNEVVPDSFKKPYL FT IKITSDWCFSCIHIEPVWKEVIQELEELGVGIGVVHAGYERRLAHHLGAHSTPSILGII FT NGKISFFHNAVVRENLRQFVESLLPGNLVEKVTNKNYVRFLSGWQQENKPHVLLFDQTP FT IVPLLYKLTAFAYKDYLSFGYVYVGLRGTEEMTRRYNINIYAPTLLVFKEHINRPADVI FT QARGMKKQIIDDFITRNKYLLAARLTSQKLFHELCPVKRSHRQRKYCVVLLTAETTKLS FT KPFEAFLSFALANTQDTVRFVHVYSNRQQEFADTLLPDSEAFQGKSAVSILERRNTAGR FT VVYKTLEDPWIGSESDKFILLGYLDQLRKDPALLSSEAVLPDLTDELAPVFLLRWFYSA FT SDYISDCWDSIFHNNWREMMPLLSLIFSALFILFGTVIVQAFSDSNDERESSPPEKEEA FT QEKTGKTEPSFTKENSSKIPKKGFVEVTELTDVTYTSNLVRLRPGHMNVVLILSNSTKT FT SLLQKFALEVYTFTGKIIRW" FT mRNA 15986364..15988217 FT /gene="RSC1A1" FT /locus_tag="RP4-680D5.7-001" FT /product="regulatory solute carrier protein, family 1, FT member 1" FT CDS 15986364..15988217 FT /gene="RSC1A1" FT /locus_tag="RP4-680D5.7-001" FT /standard_name="OTTHUMP00000071185" FT /product="regulatory solute carrier protein, family 1, FT member 1" FT /note="match: proteins: Tr:O02665 Tr:Q29106 Tr:Q92681 FT Tr:Q9CVU8" FT /protein_id="CAI95731.1" FT /translation="MSSLPTSDGFNHPARSSGQSPDVGNPMSLARSVSASVCPIKPSDS FT DRIEPKAVKALKASAEFQLNSEKKEHLSLQDLSDHASSADHAPTDQSPAMPMQNSSEEI FT TVAGNLEKSAERSTQGLKFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLSQVS FT DPQQHEEPGNEQYEVAQQKASHDQEYLCNIGDLELPEERQQNQHKIVDLEATMKGNGLP FT QNVDPPSAKKSIPSSECSGCSNSETFMEIDTAQQSLVTLLNSTGRQNANVKNIGALDLT FT LDNPLMEVETSKCNPSSEILNDSISTQDLQPPETNVEIPGTNKEYGHYSSPSLCGSCQP FT SVESAEESCPSITAALKELHELLVVSSKPASENTSEEVICQSETIAEGQTSIKDLSERW FT TQNEHLTQNEQCPQVSFHQAISVSVETEKLTGTSSDTGREAVENVNFRSLGDGLSTDKE FT GVPKSRESINKNRSVTVTSAKTSNQLHCTLGVEISPKLLAGEEDALNQTSEQTKSLSSN FT FILVKDLGQGIQNSVTDRPETRENVCPDASRPLLEYEPPTSHPSSSPAILPPLIFPATD FT IDRILRAGFTLQEALGALHRVGGNADLALLVLLAKNIVVPT" FT polyA_signal 15995519..15995524 FT polyA_site 15995539 FT misc_feature 15999019..15999037 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 16010640..16010926 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA join(16010827..16011113,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT AL606758.15:17106..17165,AL450998.19:2553..2781, FT AL450998.19:4250..5068,AL450998.19:5315..5384, FT AL450998.19:5503..5593,AL450998.19:5905..5969, FT AL450998.19:6338..6426,AL450998.19:7033..7165, FT AL450998.19:7768..7958,AL450998.19:8428..8493, FT AL450998.19:9125..9284,AL450998.19:9586..9765, FT AL450998.19:9848..9964,AL450998.19:11033..12005) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-001" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: ESTs: Em:AA336278.1 Em:AL118920.1 FT Em:BG699753.1 Em:BG762879.1 Em:BG831775.1 Em:BM049494.1 FT Em:BM676917.1 Em:BQ002925.1 Em:BQ005553.1 Em:BU845079.1 FT Em:CB216475.1" FT /note="match: cDNAs: Em:AB020649.1 Em:AL137297.1 FT Em:BC008002.1 Em:BC016488.1 Em:BC030545.1 Em:BC040441.1 FT Em:BC042103.1" FT mRNA join(16010885..16011113,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT AL450998.19:2553..2781,AL450998.19:4250..5068, FT AL450998.19:5315..5384,AL450998.19:5503..5593, FT AL450998.19:5905..5969,AL450998.19:6338..6426, FT AL450998.19:7033..7165,AL450998.19:7768..7958, FT AL450998.19:8428..8493,AL450998.19:9125..9284, FT AL450998.19:9586..9765,AL450998.19:9848..9964, FT AL450998.19:11033..12005) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-002" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: ESTs: Em:BU611093.1 Em:CA870254.1" FT /note="match: cDNAs: Em:AK122386.1" FT mRNA join(16011036..16011113,AL606758.15:12014..12120, FT AL606758.15:13670..13769,AL606758.15:14315..14402, FT AL606758.15:15511..15646) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-004" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: ESTs: Em:BI341599.1" FT CDS join(16011054..16011113,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT AL606758.15:17106..17165,AL450998.19:2553..2781, FT AL450998.19:4250..5068,AL450998.19:5315..5384, FT AL450998.19:5503..5593,AL450998.19:5905..5969, FT AL450998.19:6338..6426,AL450998.19:7033..7165, FT AL450998.19:7768..7958,AL450998.19:8428..8493, FT AL450998.19:9125..9284,AL450998.19:9586..9765, FT AL450998.19:9848..9964,AL450998.19:11033..11170) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-001" FT /standard_name="OTTHUMP00000003094" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: proteins: Tr:O94928" FT /protein_id="CAI22373.1" FT /translation="MEPGEVKDRILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRL FT CEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNEN FT SLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDAPYLDLA FT PYMPDYYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVTSTNLEWDDSAIAPSSEDYDFG FT DVFPAVPSVPSTDWEDGDLTDTVSGPRSTASDLTSSKASTRSPTQRQNPFNEEPAETVS FT SSDTTPVHTTSQEKEEAQALDPPDACTELEVIRVTKKKKIGKKKKSRSDEEASPLHPAC FT SQKKCAKQGDGDSRNGSPSLGRDSPDTMLASPQEEGEGPSSTTESSERSEPGLLIPEMK FT DTSMERLGQPLSKVIDQLNGQLDPSTWCSRAEPPDQSFRTGSPGDAPERPPLCDFSEGL FT SAPMDFYRFTVESPSTVTSGGGHHDPAGLGQPLHVPSSPEAAGQEEEGGGGEGQTPRPL FT EDTTREAQELEAQLSLVREGPVSEPEPGTQEVLCQLKRDQPSPCLSSAEDSGVDEGQGS FT PSEMVHSSEFRVDNNHLLLLMIHVFRENEEQLFKMIRMSTGHMEGNLQLLYVLLTDCYV FT YLLRKGATEKPYLVEEAVSYNELDYVSVGLDQQTVKLVCTNRRKQFLLDTADVALAEFF FT LASLKSAMIKGCREPPYPSILTDATMEKLALAKFVAQESKCEASAVTVRFYGLVHWEDP FT TDESLGPTPCHCSPPEGTITKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD FT VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQA FT VSKGVIPQGVAPSPCIPCCLVLTDDRLFTCHEDCQTSFFRSLGTAKLGDISAVSTEPGK FT EYCVLEFSQDSQQLLPPWVIYLSCTSELDRLLSALNSGWKTIYQVDLPHTAIQEASNKK FT KFEDALSLIHSAWQRSDSLCRGRASRDPWC" FT CDS join(16011054..16011113,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT AL450998.19:2553..2781,AL450998.19:4250..5068, FT AL450998.19:5315..5384,AL450998.19:5503..5593, FT AL450998.19:5905..5969,AL450998.19:6338..6426, FT AL450998.19:7033..7165,AL450998.19:7768..7958, FT AL450998.19:8428..8493,AL450998.19:9125..9284, FT AL450998.19:9586..9765,AL450998.19:9848..9964, FT AL450998.19:11033..11170) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-002" FT /standard_name="OTTHUMP00000003095" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: proteins: Tr:Q80TQ5" FT /protein_id="CAI22374.1" FT /translation="MEPGEVKDRILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRL FT CEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNEN FT SLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDAPYLDLA FT PYMPDYYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVTSTNLEWDDSAIAPSSEDGDLT FT DTVSGPRSTASDLTSSKASTRSPTQRQNPFNEEPAETVSSSDTTPVHTTSQEKEEAQAL FT DPPDACTELEVIRVTKKKKIGKKKKSRSDEEASPLHPACSQKKCAKQGDGDSRNGSPSL FT GRDSPDTMLASPQEEGEGPSSTTESSERSEPGLLIPEMKDTSMERLGQPLSKVIDQLNG FT QLDPSTWCSRAEPPDQSFRTGSPGDAPERPPLCDFSEGLSAPMDFYRFTVESPSTVTSG FT GGHHDPAGLGQPLHVPSSPEAAGQEEEGGGGEGQTPRPLEDTTREAQELEAQLSLVREG FT PVSEPEPGTQEVLCQLKRDQPSPCLSSAEDSGVDEGQGSPSEMVHSSEFRVDNNHLLLL FT MIHVFRENEEQLFKMIRMSTGHMEGNLQLLYVLLTDCYVYLLRKGATEKPYLVEEAVSY FT NELDYVSVGLDQQTVKLVCTNRRKQFLLDTADVALAEFFLASLKSAMIKGCREPPYPSI FT LTDATMEKLALAKFVAQESKCEASAVTVRFYGLVHWEDPTDESLGPTPCHCSPPEGTIT FT KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRA FT NTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKGVIPQGVAPSPCIPCCL FT VLTDDRLFTCHEDCQTSFFRSLGTAKLGDISAVSTEPGKEYCVLEFSQDSQQLLPPWVI FT YLSCTSELDRLLSALNSGWKTIYQVDLPHTAIQEASNKKKFEDALSLIHSAWQRSDSLC FT RGRASRDPWC" FT misc_feature 16032618 FT /note="Clone_right_end: RP4-680D5" FT misc_feature 16032719..16051259 FT /note="annotated region of clone" FT mRNA complement(join(16049214..16049562,16049698..16049782, FT AL450998.19:9623..9797,AL450998.19:14097..14132)) FT /locus_tag="RP11-288I21.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM923864.1" FT misc_feature 16047260 FT /note="Clone_left_end: RP11-169K16" FT mRNA join(AL121992.24:148508..148794,16042732..16042838, FT 16043202..16043311,16044388..16044487,16045033..16045120, FT 16046229..16046415,16047824..16047883, FT AL450998.19:2553..2781,AL450998.19:4250..5068, FT AL450998.19:5315..5384,AL450998.19:5503..5593, FT AL450998.19:5905..5969,AL450998.19:6338..6426, FT AL450998.19:7033..7165,AL450998.19:7768..7958, FT AL450998.19:8428..8493,AL450998.19:9125..9284, FT AL450998.19:9586..9765,AL450998.19:9848..9964, FT AL450998.19:11033..12005) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-001" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: cDNAs: Em:AB020649.1 Em:AL137297.1 FT Em:BC008002.1 Em:BC016488.1 Em:BC030545.1 Em:BC040441.1 FT Em:BC042103.1" FT /note="match: ESTs: Em:AA336278.1 Em:AL118920.1 FT Em:BG699753.1 Em:BG762879.1 Em:BG831775.1 Em:BM049494.1 FT Em:BM676917.1 Em:BQ002925.1 Em:BQ005553.1 Em:BU845079.1 FT Em:CB216475.1" FT mRNA join(AL121992.24:148566..148794,16042732..16042838, FT 16043202..16043311,16044388..16044487,16045033..16045120, FT 16046229..16046415,AL450998.19:2553..2781, FT AL450998.19:4250..5068,AL450998.19:5315..5384, FT AL450998.19:5503..5593,AL450998.19:5905..5969, FT AL450998.19:6338..6426,AL450998.19:7033..7165, FT AL450998.19:7768..7958,AL450998.19:8428..8493, FT AL450998.19:9125..9284,AL450998.19:9586..9765, FT AL450998.19:9848..9964,AL450998.19:11033..12005) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-002" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: cDNAs: Em:AK122386.1" FT /note="match: ESTs: Em:BU611093.1 Em:CA870254.1" FT mRNA join(AL121992.24:148717..148794,16042732..16042838, FT 16044388..16044487,16045033..16045120,16046229..16046364) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-004" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: ESTs: Em:BI341599.1" FT CDS join(AL121992.24:148735..148794,16042732..16042838, FT 16043202..16043311,16044388..16044487,16045033..16045120, FT 16046229..16046415,16047824..16047883, FT AL450998.19:2553..2781,AL450998.19:4250..5068, FT AL450998.19:5315..5384,AL450998.19:5503..5593, FT AL450998.19:5905..5969,AL450998.19:6338..6426, FT AL450998.19:7033..7165,AL450998.19:7768..7958, FT AL450998.19:8428..8493,AL450998.19:9125..9284, FT AL450998.19:9586..9765,AL450998.19:9848..9964, FT AL450998.19:11033..11170) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-001" FT /standard_name="OTTHUMP00000003094" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: proteins: Tr:O94928" FT /protein_id="CAH72017.1" FT /translation="MEPGEVKDRILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRL FT CEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNEN FT SLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDAPYLDLA FT PYMPDYYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVTSTNLEWDDSAIAPSSEDYDFG FT DVFPAVPSVPSTDWEDGDLTDTVSGPRSTASDLTSSKASTRSPTQRQNPFNEEPAETVS FT SSDTTPVHTTSQEKEEAQALDPPDACTELEVIRVTKKKKIGKKKKSRSDEEASPLHPAC FT SQKKCAKQGDGDSRNGSPSLGRDSPDTMLASPQEEGEGPSSTTESSERSEPGLLIPEMK FT DTSMERLGQPLSKVIDQLNGQLDPSTWCSRAEPPDQSFRTGSPGDAPERPPLCDFSEGL FT SAPMDFYRFTVESPSTVTSGGGHHDPAGLGQPLHVPSSPEAAGQEEEGGGGEGQTPRPL FT EDTTREAQELEAQLSLVREGPVSEPEPGTQEVLCQLKRDQPSPCLSSAEDSGVDEGQGS FT PSEMVHSSEFRVDNNHLLLLMIHVFRENEEQLFKMIRMSTGHMEGNLQLLYVLLTDCYV FT YLLRKGATEKPYLVEEAVSYNELDYVSVGLDQQTVKLVCTNRRKQFLLDTADVALAEFF FT LASLKSAMIKGCREPPYPSILTDATMEKLALAKFVAQESKCEASAVTVRFYGLVHWEDP FT TDESLGPTPCHCSPPEGTITKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD FT VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQA FT VSKGVIPQGVAPSPCIPCCLVLTDDRLFTCHEDCQTSFFRSLGTAKLGDISAVSTEPGK FT EYCVLEFSQDSQQLLPPWVIYLSCTSELDRLLSALNSGWKTIYQVDLPHTAIQEASNKK FT KFEDALSLIHSAWQRSDSLCRGRASRDPWC" FT CDS join(AL121992.24:148735..148794,16042732..16042838, FT 16043202..16043311,16044388..16044487,16045033..16045120, FT 16046229..16046415,AL450998.19:2553..2781, FT AL450998.19:4250..5068,AL450998.19:5315..5384, FT AL450998.19:5503..5593,AL450998.19:5905..5969, FT AL450998.19:6338..6426,AL450998.19:7033..7165, FT AL450998.19:7768..7958,AL450998.19:8428..8493, FT AL450998.19:9125..9284,AL450998.19:9586..9765, FT AL450998.19:9848..9964,AL450998.19:11033..11170) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-002" FT /standard_name="OTTHUMP00000003095" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: proteins: Tr:Q80TQ5" FT /protein_id="CAH72018.1" FT /translation="MEPGEVKDRILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRL FT CEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNEN FT SLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDAPYLDLA FT PYMPDYYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVTSTNLEWDDSAIAPSSEDGDLT FT DTVSGPRSTASDLTSSKASTRSPTQRQNPFNEEPAETVSSSDTTPVHTTSQEKEEAQAL FT DPPDACTELEVIRVTKKKKIGKKKKSRSDEEASPLHPACSQKKCAKQGDGDSRNGSPSL FT GRDSPDTMLASPQEEGEGPSSTTESSERSEPGLLIPEMKDTSMERLGQPLSKVIDQLNG FT QLDPSTWCSRAEPPDQSFRTGSPGDAPERPPLCDFSEGLSAPMDFYRFTVESPSTVTSG FT GGHHDPAGLGQPLHVPSSPEAAGQEEEGGGGEGQTPRPLEDTTREAQELEAQLSLVREG FT PVSEPEPGTQEVLCQLKRDQPSPCLSSAEDSGVDEGQGSPSEMVHSSEFRVDNNHLLLL FT MIHVFRENEEQLFKMIRMSTGHMEGNLQLLYVLLTDCYVYLLRKGATEKPYLVEEAVSY FT NELDYVSVGLDQQTVKLVCTNRRKQFLLDTADVALAEFFLASLKSAMIKGCREPPYPSI FT LTDATMEKLALAKFVAQESKCEASAVTVRFYGLVHWEDPTDESLGPTPCHCSPPEGTIT FT KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRA FT NTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKGVIPQGVAPSPCIPCCL FT VLTDDRLFTCHEDCQTSFFRSLGTAKLGDISAVSTEPGKEYCVLEFSQDSQQLLPPWVI FT YLSCTSELDRLLSALNSGWKTIYQVDLPHTAIQEASNKKKFEDALSLIHSAWQRSDSLC FT RGRASRDPWC" FT misc_feature 16051260..16212367 FT /note="annotated region of clone" FT mRNA join(16056340..16056424,16057027..16057217, FT 16057687..16057752,16058445..16058543,16058845..16059024, FT 16059107..16059223,16060292..16060610) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-003" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: ESTs: Em:BE750503.1 Em:BM462900.1" FT polyA_signal 16061238..16061243 FT polyA_site 16061264 FT mRNA join(16062900..16063358,16064424..16064489, FT 16064588..16064740,16065089..16065223,16065719..16067891) FT /gene="SLC25A34" FT /locus_tag="RP11-169K16.2-001" FT /product="solute carrier family 25, member 34" FT /note="match: ESTs: Em:AI430537.1 Em:AI954755.1 FT Em:AI969245.1 Em:AW325552.1 Em:AW326166.1 Em:BF190022.1 FT Em:BI550141.1 Em:BI776148.1 Em:BQ694098.1 Em:BU244576.1 FT Em:BU616365.1 Em:BX509544.1" FT /note="match: cDNAs: Em:AK024244.1" FT CDS join(16062981..16063358,16064424..16064489, FT 16064588..16064740,16065089..16065223,16065719..16065901) FT /gene="SLC25A34" FT /locus_tag="RP11-169K16.2-001" FT /standard_name="OTTHUMP00000003096" FT /product="solute carrier family 25, member 34" FT /note="match: proteins: Sw:P22292 Tr:Q99KM5 Tr:Q9D913 FT Tr:Q9V6X9" FT /protein_id="CAH70849.1" FT /translation="METVPPAVDLVLGASACCLACVFTNPLEVVKTRLQLQGELQARGT FT YPRPYHGFIASVAAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCYSLACQAGLTQQPG FT GTVVAGAVAGALGAFVGSPAYLIKTQLQAQTVAAVAVGHQHNHQTVLGALETIWRQQGL FT LGLWQGVGGAVPRVMVGSAAQLATFASAKAWVQKQQWLPEDSWLVALAGGMISSIAVVV FT VMTPFDVVSTRLYNQPVDTAGRGQLYGGLTDCMVKIWRQEGPLALYKGLGPAYLRLGPH FT TILSMLFWDELRKLAGRAQHKGT" FT mRNA complement(join(AL606758.15:18496..18844, FT AL606758.15:18980..19064,16058882..16059056, FT 16063356..16063391)) FT /locus_tag="RP11-288I21.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM923864.1" FT mRNA join(16064278..16064489,16064588..16064740, FT 16065089..16065223,16065719..16065830) FT /gene="SLC25A34" FT /locus_tag="RP11-169K16.2-002" FT /product="solute carrier family 25, member 34" FT /note="match: ESTs: Em:CB267670.1" FT mRNA join(16065530..16065592,16065719..16066057) FT /gene="SLC25A34" FT /locus_tag="RP11-169K16.2-003" FT /product="solute carrier family 25, member 34" FT /note="match: ESTs: Em:BI052458.1" FT polyA_signal 16067859..16067864 FT polyA_site 16067891 FT mRNA join(16068917..16069142,16069330..16069402, FT 16069515..16069689,16070655..16071075,16073362..16073549, FT 16074041..16074477) FT /locus_tag="RP11-169K16.3-001" FT /product="novel protein" FT /note="match: ESTs: Em:AL564522.2 Em:AW919479.1 FT Em:BF782372.1 Em:BI759646.1 Em:BI763511.1 Em:BQ943277.1" FT /note="match: cDNAs: Em:BC025833.1" FT mRNA join(16069042..16069142,16069515..16069689, FT 16070655..16071075) FT /locus_tag="RP11-169K16.3-002" FT /product="novel protein" FT /note="match: ESTs: Em:Z83060.2" FT CDS join(16069055..16069142,16069330..16069402, FT 16069515..16069689,16070655..16071075,16073362..16073549, FT 16074041..16074127) FT /locus_tag="RP11-169K16.3-001" FT /standard_name="OTTHUMP00000003097" FT /product="novel protein" FT /note="match: proteins: Tr:Q8R115" FT /protein_id="CAH70850.1" FT /translation="MFSLPSLPSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLK FT VYFFVGCANDPQRRPEKERLRAQWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAV FT STLLSLGKGSQGAAERLQLYLLCQYSLGCGLTCGLSFLQEGAPHRTLNLLLSLGLATLL FT GLGARRLHRHVCRLYELHSSQRYCGVCLGLLAHAHGLPQLLGRALAIAFAVGDLAAVAL FT INQDFLTTSEAMRFWTPLTICYTLLVIYMQEEQRQHPGLQSQVQTVLVRMGGLFVLLLT FT VGRWLDLLGILVSLLGELWCLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQSQSS FT APS" FT polyA_signal 16074455..16074460 FT polyA_site 16074477 FT mRNA complement(join(16066546..16066717,16075925..16076391)) FT /locus_tag="RP11-169K16.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM679822.1" FT misc_feature 16078345..16078609 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT mRNA join(16083112..16083227,16084669..16084850, FT 16090991..16091177) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-006" FT /product="filamin binding LIM protein 1" FT /note="match: ESTs: Em:CB129711.1" FT mRNA join(16083139..16083227,16084669..16084824, FT 16090991..16091180,16091459..>16091530) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-005" FT /product="filamin binding LIM protein 1" FT /note="match: ESTs: Em:BQ081983.1" FT mRNA join(16083154..16083227,16084669..16084824, FT 16090988..16091180,16091459..16091728,16093871..16094058, FT 16095023..16095125,16096904..16097073,16101113..16101291, FT 16103665..16103782,16111043..16113089) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-001" FT /product="filamin binding LIM protein 1" FT /note="match: ESTs: Em:AW069718.1 Em:AW938874.1 FT Em:BI334171.1 Em:CB140325.1 Em:CB215706.1" FT /note="match: cDNAs: Em:AL133035.1 Em:AY180161.1 FT Em:BC019895.1" FT mRNA join(16084914..16085343,16090991..16091180, FT 16091459..16091728,16093871..16094058,16095023..16095125, FT 16096904..16097073,16101113..16101291,16103665..16103782, FT 16111043..16113089) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-002" FT /product="filamin binding LIM protein 1" FT /note="match: ESTs: Em:BQ050801.1 Em:BX471141.1" FT /note="match: cDNAs: Em:AK055259.1" FT mRNA join(16085299..16085343,16090988..16091180, FT 16091459..>16091721) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-007" FT /product="filamin binding LIM protein 1" FT /note="match: ESTs: Em:AL709066.1" FT mRNA join(16090994..16091180,16091459..16091728, FT 16093871..16094058,16095023..16095125,16096904..16097073, FT 16101113..16101737) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-003" FT /product="filamin binding LIM protein 1" FT /note="match: cDNAs: Em:AF459643.1" FT mRNA join(16091448..16091728,16096904..16097073, FT 16101113..16101291,16103665..16103782,16111043..16113089) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-004" FT /product="filamin binding LIM protein 1" FT /note="match: cDNAs: Em:AK027444.1" FT CDS 16091479..>16091530 FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-005" FT /standard_name="OTTHUMP00000003143" FT /product="filamin binding LIM protein 1" FT /protein_id="CAH70851.1" FT /translation="MASKPEKRVASSVFITL" FT CDS 16091479..>16091721 FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-007" FT /standard_name="OTTHUMP00000003144" FT /product="filamin binding LIM protein 1" FT /protein_id="CAH70852.1" FT /translation="MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEA FT PAPMKTPEAGLAGRPSPWTTPGRAAATVPAAPMQLF" FT CDS join(16091479..16091728,16093871..16094058, FT 16095023..16095125,16096904..16097073,16101113..16101291, FT 16103665..16103782,16111043..16111156) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-001" FT /standard_name="OTTHUMP00000003118" FT /product="filamin binding LIM protein 1" FT /note="match: proteins: Sw:Q8WUP2" FT /protein_id="CAH70854.1" FT /translation="MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEA FT PAPMKTPEAGLAGRPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLL FT PPPPPPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPME FT EELPPPPAEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQS FT FYQKDGRPLCEPCYQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESF FT ALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRI FT LLSVEPTDQGCYPLNNHLFCKPCHVKRSAAGCC" FT CDS join(16091479..16091728,16096904..16097073, FT 16101113..16101291,16103665..16103782,16111043..16111156) FT /gene="FBLIM1" FT /locus_tag="RP11-169K16.5-004" FT /standard_name="OTTHUMP00000003120" FT /product="filamin binding LIM protein 1" FT /note="match: proteins: Sw:Q8WUP2" FT /protein_id="CAH70853.1" FT /translation="MASKPEKRVASSVFITLAPPRRDVAVAEEVRQAVCEARRGRPWEA FT PAPMKTPEAGLAGRPSPWTTPGRAAATVPAAPMQLFNGDICAFCHKTVSPRELAVEAMK FT RQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKCGEVVRDHIIRALGQ FT AFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAF FT KIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPLNNHLFCKPCHVKRSAAGCC" FT misc_feature 16093984..16094125 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT misc_feature 16105861..16106122 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT misc_feature 16106371..16106459 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT polyA_signal 16113059..16113064 FT polyA_site 16113089 FT CDS 16119291..16119780 FT /pseudo FT /locus_tag="RP11-169K16.6-001" FT /product="ribosomal protein L12 (RPL12) pseudogene" FT /note="match: proteins: Sw:P23358 Sw:P30050 Sw:P35979 FT Tr:Q8C2K0 Tr:Q90YV6" FT misc_feature 16130494..16130505 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT CDS complement(16133869..16134144) FT /pseudo FT /locus_tag="RP11-169K16.7-001" FT /product="ubiquinol-cytochrome c reductase hinge protein FT (UQCRH) pseudogene" FT /note="match: proteins: Sw:P07919 Sw:P99028 Sw:Q8SPH5 FT Tr:Q5TDF6" FT /db_xref="PSEUDO:CAH70856.1" FT misc_feature 16137571..16137637 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT misc_feature 16146440..16146454 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT misc_feature 16148590..16148599 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 16149751..16149812 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 16150141..16150321 FT /note="Sequence from overlapping clone RP11-288I21 FT (AL606758). Assembly confirmed by restriction digest" FT CDS 16154727..16155164 FT /pseudo FT /locus_tag="RP11-169K16.8-001" FT /product="ribosomal protein S16 (RPS16) pseudogene" FT /note="match: proteins: Sw:P62250 Sw:Q98TR7 Tr:P14131 FT Tr:P14131 Tr:P14131 Tr:P14131 Tr:Q8ISP2" FT misc_feature 16156397 FT /note="Clone_right_end: RP11-288I21" FT misc_feature 16167993..16168132 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(16174359..16174645,16199311..16199631, FT 16202697..16203173,AL034555.2:25448..25608, FT AL034555.2:27228..27428,AL034555.2:32255..32406, FT AL034555.2:35053..35178,AL034555.2:35531..35644, FT AL034555.2:36997..37110,AL034555.2:38376..38476, FT AL034555.2:44218..52393,AL034555.2:53290..53772, FT AL034555.2:53939..54133,AL034555.2:54845..55003, FT AL034555.2:55423..56587) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-001" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:AA004363.1 Em:AW371149.1 FT Em:AW955348.1 Em:BF818561.1 Em:BI024731.1 Em:BM801786.1 FT Em:BM831808.1 Em:BM832329.1 Em:BU631681.1 Em:BU931965.1 FT Em:CA418834.1 Em:T33276.1" FT /note="match: cDNAs: Em:AB023146.1 Em:AB055980.1 FT Em:AF356524.1 Em:AK092332.1 Em:AK127577.1 Em:AL096858.1" FT CDS join(16174563..16174645,16199311..16199631, FT 16202697..16203173,AL034555.2:25448..25608, FT AL034555.2:27228..27428,AL034555.2:32255..32406, FT AL034555.2:35053..35178,AL034555.2:35531..35644, FT AL034555.2:36997..37110,AL034555.2:38376..38476, FT AL034555.2:44218..52393,AL034555.2:53290..53772, FT AL034555.2:53939..54133,AL034555.2:54845..55003, FT AL034555.2:55423..55554) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-001" FT /standard_name="OTTHUMP00000010982" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: proteins: Sw:Q96T58" FT /protein_id="CAH70858.1" FT /translation="MVRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEG FT GVAAFVDFVDIKSAQKAHNSVNKMGDRDLRTDYNEPGTIPSAARGLDDTVSIASRSREV FT SGFRGGGGGPAYGPPPSLHAREGRYERRLDGASDNRERAYEHSAYGHHERGTGGFDRTR FT HYDQDYYRDPRERTLQHGLYYASRSRSPNRFDAHDPRYEPRAREQFTLPSVVHRDIYRD FT DITREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSS FT DSISSSSSTSSDSSDSSSSSSDDSPARSVQSAAVPAPTSQLLSSLEKDEPRKSFGIKVQ FT NLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGK FT LFFGMQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIF FT QRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTN FT CVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKGRK FT IGGNKIKVDFANRESQLAFYHCMEKSGQDIRDFYEMLAERREERRASYDYNQDRTYYES FT VRTPGTYPEDSRRDYPARGREFYSEWETYQGDYYESRYYDDPREYRDYRNDPYEQDIRE FT YSYRQRERERERERFESDRDRDHERRPIERSQSPVHLRRPQSPGASPSQAERLPSDSER FT RLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTFDPERVERERRLIRKE FT KVEKDKTDKQKRKGKVHSPSSQSSETDQENEREQSPEKPRSCNKLSREKADKEGIAKNR FT LELMPCVVLTRVKEKEGKVIDHTPVEKLKAKLDNDTVKSSALDQKLQVSQTEPAKSDLS FT KLESVRMKVPKEKGLSSHVEVVEKEGRLKARKHLKPEQPADGVSAVDLEKLEARKRRFA FT DSNLKAEKQKPEVKKSSPEMEDARVLSKKQPDVSSREVILLREGEAERKPVRKEILKRE FT SKKIKLDRLNTVASPKDCQELASISVGSGSRPSSDLQARLGELAGESVENQEVQSKKPI FT PSKPQLKQLQVLDDQGPEREDVRKNYCSLRDETPERKSGQEKSHSVNTEEKIGIDIDHT FT QSYRKQMEQSRRKQQMEMEIAKSEKFGSPKKDVDEYERRSLVHEVGKPPQDVTDDSPPS FT KKKRMDHVDFDICTKRERNYRSSRQISEDSERTGGSPSVRHGSFHEDEDPIGSPRLLSV FT KGSPKVDEKVLPYSNITVREESLKFNPYDSSRREQMADMAKIKLSVLNSEDELNRWDSQ FT MKQDAGRFDVSFPNSIIKRDSLRKRSVRDLEPGEVPSDSDEDGEHKSHSPRASALYESS FT RLSFLLRDREDKLRERDERLSSSLERNKFYSFALDKTITPDTKALLERAKSLSSSREEN FT WSFLDWDSRFANFRNNKDKEKVDSAPRPIPSWYMKKKKIRTDSEGKMDDKKEDHKEEEQ FT ERQELFASRFLHSSIFEQDSKRLQHLERKEEDSDFISGRIYGKQTSEGANSTTDSIQEP FT VVLFHSRFMELTRMQQKEKEKDQKPKEVEKQEDTENHPKTPESAPENKDSELKTPPSVG FT PPSVTVVTLESAPSALEKTTGDKTVEAPLVTEEKTVEPATVSEEAKPASEPAPAPVEQL FT EQVDLPPGADPDKEAAMMPAGVEEGSSGDQPPYLDAKPPTPGASFSQAESNVDPEPDST FT QPLSKPAQKSEEANEPKAEKPDATADAEPDANQKAEAAPESQPPASEDLEVDPPVAAKD FT KKPNKSKRSKTPVQAAAVSIVEKPVTRKSERIDREKLKRSNSPRGEAQKLLELKMEAEK FT ITRTASKNSAADLEHPEPSLPLSRTRRRNVRSVYATMGDHENRSPVKEPVEQPRVTRKR FT LERELQEAAAVPTTPRRGRPPKTRRRADEEEENEAKEPAETLKPPEGWRSPRSQKTAAG FT GGPQGKKGKNEPKVDATRPEATTEVGPQIGVKESSMEPKAAEEEAGSEQKRDRKDAGTD FT KNPPETAPVEVVEKKPAPEKNSKSKRGRSRNSRLAVDKSASLKNVDAAVSPRGAAAQAG FT ERESGVVAVSPEKSESPQKEDGLSSQLKSDPVDPDKEPEKEDVSASGPSPEATQLAKQM FT ELEQAVEHIAKLAEASASAAYKADAPEGLAPEDRDKPAHQASETELAAAIGSIINDISG FT EPENFPAPPPYPGESQTDLQPPAGAQALQPSEEGMETDEAVSGILETEAATESSRPPVN FT APDPSAGPTDTKEARGNSSETSHSVPEAKGSKEVEVTLVRKDKGRQKTTRSRRKRNTNK FT KVVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTPPQSCTSDLSKI FT PSTENSSQEISVEERTPTKASVPPDLPPPPQPAPVDEEPQARFRVHSIIESDPVTPPSD FT PSIPIPTLPSVTAAKLSPPVASGGIPHQSPPTKVTEWITRQEEPRAQSTPSPALPPDTK FT ASDVDTSSSTLRKILMDPKYVSATSVTSTSVTTAIAEPVSAAPCLHEAPPPPVDSKKPL FT EEKTAPPVTNNSEIQASEVLVAADKEKVAPVIAPKITSVISRMPVSIDLENSQKITLAK FT PAPQTLTGLVSALTGLVNVSLVPVNALKGPVKGSVTTLKSLVSTPAGPVNVLKGPVNVL FT TGPVNVLTTPVNATVGTVNAAPGTVNAAASAVNATASAVTVTAGAVTAASGGVTATTGT FT VTMAGAVIAPSTKCKQRASANENSRFHPGSMPVIDDRPADAGSGAGLRVNTSEGVVLLS FT YSGQKTEGPQRISAKISQIPPASAMDIEFQQSVSKSQVKPDSVTASQPPSKGPQAPAGY FT ANVATHSTLVLTAQTYNASPVISSVKADRPSLEKPEPIHLSVSTPVTQGGTVKVLTQGI FT NTPPVLVHNQLVLTPSIVTTNKKLADPVTLKIETKVLQPANLGSTLTPHHPPALPSKLP FT TEVNHVPSGPSIPADRTVSHLAAAKLDAHSPRPSGPGPSSFPRASHPSSTASTALSTNA FT TVMLAAGIPVPQFISSIHPEQSVIMPPHSITQTVSLSHLSQGEVRMNTPTLPSITYSIR FT PEALHSPRAPLQPQQIEVRAPQRASTPQPAPAGVPALASQHPPEEEVHYHLPVARATAP FT VQSEVLVMQSEYRLHPYTVPRDVRIMVHPHVTAVSEQPRAADGVVKVPPASKAPQQPGK FT EAAKTPDAKAAPTPTPAPVPVPVPLPAPAPAPHGEARILTVTPSNQLQGLPLTPPVVVT FT HGVQIVHSSGELFQEYRYGDIRTYHPPAQLTHTQFPAASSVGLPSRTKTAAQGPPPEGE FT PLQPPQPVQSTQPAQPAPPCPPSQLGQPGQPPSSKMPQVSQEAKGTQTGVEQPRLPAGP FT ANRPPEPHTQVQRAQAETGPTSFPSPVSVSMKPDLPVSLPTQTAPKQPLFVPTTSGPST FT PPGLVLPHTEFQPAPKQDSSPHLTSQRPVDMVQLLKKYPIVWQGLLALKNDTAAVQLHF FT VSGNNVLAHRSLPLSEGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGRDQ FT EDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAP FT DLLASISNISPHLMIVIASV" FT mRNA complement(join(16160974..16163401,16174603..16174642)) FT /locus_tag="RP11-169K16.9-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK124018.1" FT mRNA join(AL121992.24:148508..148794,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT AL606758.15:17106..17165,16051812..16052040, FT 16053509..16054327,16054574..16054643,16054762..16054852, FT 16055164..16055228,16055597..16055685,16056292..16056424, FT 16057027..16057217,16057687..16057752,16058384..16058543, FT 16058845..16059024,16059107..16059223,16060292..16061264) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-001" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: ESTs: Em:AA336278.1 Em:AL118920.1 FT Em:BG699753.1 Em:BG762879.1 Em:BG831775.1 Em:BM049494.1 FT Em:BM676917.1 Em:BQ002925.1 Em:BQ005553.1 Em:BU845079.1 FT Em:CB216475.1" FT /note="match: cDNAs: Em:AB020649.1 Em:AL137297.1 FT Em:BC008002.1 Em:BC016488.1 Em:BC030545.1 Em:BC040441.1 FT Em:BC042103.1" FT mRNA join(AL121992.24:148566..148794,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT 16051812..16052040,16053509..16054327,16054574..16054643, FT 16054762..16054852,16055164..16055228,16055597..16055685, FT 16056292..16056424,16057027..16057217,16057687..16057752, FT 16058384..16058543,16058845..16059024,16059107..16059223, FT 16060292..16061264) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-002" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: ESTs: Em:BU611093.1 Em:CA870254.1" FT /note="match: cDNAs: Em:AK122386.1" FT CDS join(AL121992.24:148735..148794,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT AL606758.15:17106..17165,16051812..16052040, FT 16053509..16054327,16054574..16054643,16054762..16054852, FT 16055164..16055228,16055597..16055685,16056292..16056424, FT 16057027..16057217,16057687..16057752,16058384..16058543, FT 16058845..16059024,16059107..16059223,16060292..16060429) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-001" FT /standard_name="OTTHUMP00000003094" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: proteins: Tr:O94928" FT /protein_id="CAH70859.1" FT /translation="MEPGEVKDRILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRL FT CEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNEN FT SLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDAPYLDLA FT PYMPDYYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVTSTNLEWDDSAIAPSSEDYDFG FT DVFPAVPSVPSTDWEDGDLTDTVSGPRSTASDLTSSKASTRSPTQRQNPFNEEPAETVS FT SSDTTPVHTTSQEKEEAQALDPPDACTELEVIRVTKKKKIGKKKKSRSDEEASPLHPAC FT SQKKCAKQGDGDSRNGSPSLGRDSPDTMLASPQEEGEGPSSTTESSERSEPGLLIPEMK FT DTSMERLGQPLSKVIDQLNGQLDPSTWCSRAEPPDQSFRTGSPGDAPERPPLCDFSEGL FT SAPMDFYRFTVESPSTVTSGGGHHDPAGLGQPLHVPSSPEAAGQEEEGGGGEGQTPRPL FT EDTTREAQELEAQLSLVREGPVSEPEPGTQEVLCQLKRDQPSPCLSSAEDSGVDEGQGS FT PSEMVHSSEFRVDNNHLLLLMIHVFRENEEQLFKMIRMSTGHMEGNLQLLYVLLTDCYV FT YLLRKGATEKPYLVEEAVSYNELDYVSVGLDQQTVKLVCTNRRKQFLLDTADVALAEFF FT LASLKSAMIKGCREPPYPSILTDATMEKLALAKFVAQESKCEASAVTVRFYGLVHWEDP FT TDESLGPTPCHCSPPEGTITKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD FT VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQA FT VSKGVIPQGVAPSPCIPCCLVLTDDRLFTCHEDCQTSFFRSLGTAKLGDISAVSTEPGK FT EYCVLEFSQDSQQLLPPWVIYLSCTSELDRLLSALNSGWKTIYQVDLPHTAIQEASNKK FT KFEDALSLIHSAWQRSDSLCRGRASRDPWC" FT CDS join(AL121992.24:148735..148794,AL606758.15:12014..12120, FT AL606758.15:12484..12593,AL606758.15:13670..13769, FT AL606758.15:14315..14402,AL606758.15:15511..15697, FT 16051812..16052040,16053509..16054327,16054574..16054643, FT 16054762..16054852,16055164..16055228,16055597..16055685, FT 16056292..16056424,16057027..16057217,16057687..16057752, FT 16058384..16058543,16058845..16059024,16059107..16059223, FT 16060292..16060429) FT /gene="PLEKHM2" FT /locus_tag="RP11-169K16.1-002" FT /standard_name="OTTHUMP00000003095" FT /product="pleckstrin homology domain containing, family M FT (with RUN domain) member 2" FT /note="match: proteins: Tr:Q80TQ5" FT /protein_id="CAH70860.1" FT /translation="MEPGEVKDRILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRL FT CEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNEN FT SLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDAPYLDLA FT PYMPDYYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVTSTNLEWDDSAIAPSSEDGDLT FT DTVSGPRSTASDLTSSKASTRSPTQRQNPFNEEPAETVSSSDTTPVHTTSQEKEEAQAL FT DPPDACTELEVIRVTKKKKIGKKKKSRSDEEASPLHPACSQKKCAKQGDGDSRNGSPSL FT GRDSPDTMLASPQEEGEGPSSTTESSERSEPGLLIPEMKDTSMERLGQPLSKVIDQLNG FT QLDPSTWCSRAEPPDQSFRTGSPGDAPERPPLCDFSEGLSAPMDFYRFTVESPSTVTSG FT GGHHDPAGLGQPLHVPSSPEAAGQEEEGGGGEGQTPRPLEDTTREAQELEAQLSLVREG FT PVSEPEPGTQEVLCQLKRDQPSPCLSSAEDSGVDEGQGSPSEMVHSSEFRVDNNHLLLL FT MIHVFRENEEQLFKMIRMSTGHMEGNLQLLYVLLTDCYVYLLRKGATEKPYLVEEAVSY FT NELDYVSVGLDQQTVKLVCTNRRKQFLLDTADVALAEFFLASLKSAMIKGCREPPYPSI FT LTDATMEKLALAKFVAQESKCEASAVTVRFYGLVHWEDPTDESLGPTPCHCSPPEGTIT FT KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRA FT NTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKGVIPQGVAPSPCIPCCL FT VLTDDRLFTCHEDCQTSFFRSLGTAKLGDISAVSTEPGKEYCVLEFSQDSQQLLPPWVI FT YLSCTSELDRLLSALNSGWKTIYQVDLPHTAIQEASNKKKFEDALSLIHSAWQRSDSLC FT RGRASRDPWC" FT mRNA join(16199997..16200890,16202697..16203173, FT AL034555.2:25448..25608,AL034555.2:27228..>27428) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-002" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:AL691572.1 Em:BM454742.1 FT Em:BQ881109.1" FT mRNA join(16199997..16200890,16202697..16203206) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-003" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:BF673588.1" FT CDS join(16200610..16200890,16202697..16203173, FT AL034555.2:25448..25608,AL034555.2:27228..>27428) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-002" FT /standard_name="OTTHUMP00000010983" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /protein_id="CAH70861.1" FT /translation="MNVDKFLIVCYLKKEVWGFESYSLSGTTCFQWNYFVWSLRFFFSC FT GSSKYHLTPLPIKKVDYPHKRGQNWGSYVHNSLPRFNWDYRSCFHTWKRASDNRERAYE FT HSAYGHHERGTGGFDRTRHYDQDYYRDPRERTLQHGLYYASRSRSPNRFDAHDPRYEPR FT AREQFTLPSVVHRDIYRDDITREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQAS FT RPTRSPSGSGSRSRSSSSDSISSSSSTSSDSSDSSSSSSDDSPARSVQSAAVPAPTSQL FT LSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLV FT FFRQQEDQEKALTASKGKLFFGMQIEVTAWIGP" FT mRNA join(<16203071..16203173,AL034555.2:25451..25608, FT AL034555.2:27228..27428,AL034555.2:32255..32406, FT AL034555.2:35053..35178,AL034555.2:35531..35644, FT AL034555.2:36997..>37033) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-004" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:BQ213242.1" FT CDS join(<16203071..16203173,AL034555.2:25451..25608, FT AL034555.2:27228..27428,AL034555.2:32255..32406, FT AL034555.2:35053..35178,AL034555.2:35531..35644, FT AL034555.2:36997..>37033) FT /codon_start=3 FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-004" FT /standard_name="OTTHUMP00000010984" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /protein_id="CAH70862.1" FT /translation="QASRPTRSPSGSGSRSRSSSSDSISSSSSTSSDSDSSSSSSDDSP FT ARSVQSAAVPAPTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKV FT TSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEFRP FT LDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY FT CDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGP FT VVKVVFDRLKGMALV" FT misc_feature 16208368 FT /note="Clone_left_end: RP1-134O19" FT misc_feature 16212368..16295267 FT /note="annotated region of clone" FT misc_feature 16212527..16212550 FT /note="Single clone region. PAC PCR" FT mRNA complement(join(16268364..16268747,16268826..16268915, FT 16269024..16269233,16269559..16269689,16269894..16270014, FT 16270094..16270210,16270303..16270390,16270795..16271095, FT 16271192..16271334,16271432..16271697,16272210..16272335, FT 16272649..16272789,16273430..16273618,16274786..16274992, FT AL355994.11:4267..4353,AL355994.11:7211..7354)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-001" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:AA775292.1 Em:AA983315.1 FT Em:AI341325.1 Em:AI373909.1 Em:AI689879.1 Em:AL702979.1 FT Em:AU132383.1 Em:AW297358.1 Em:AW408296.1 Em:BE378389.1 FT Em:BG326594.1 Em:BG471344.1 Em:BG476438.1 Em:BG722344.1 FT Em:BG723037.1 Em:BI826878.1 Em:BM717249.1 Em:BQ575263.1 FT Em:BU683941.1" FT /note="match: cDNAs: Em:U20647.1 Em:Y09723.1" FT mRNA complement(join(16272341..16272789,16273430..16273618, FT 16274786..16274992,AL355994.11:4267..4353, FT AL355994.11:7211..7332)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-003" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BX439851.1 Em:BX439852.1" FT mRNA join(16265078..16265371,16265791..16266039) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-005" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:AI693158.1" FT polyA_signal 16266932..16266937 FT polyA_site 16266955 FT polyA_site complement(16268364) FT polyA_signal complement(16268380..16268385) FT mRNA complement(join(16268364..16268747,16268826..16269217)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-014" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:CA450001.1" FT mRNA complement(join(16268364..16268747,16268826..16268936, FT 16269024..16269233,16269559..>16269584)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-013" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:AA643348.1 Em:AI580010.1 FT Em:AW611771.1 Em:BG235972.1 Em:BU634371.1" FT CDS complement(join(16268464..16268747,16268826..16268936, FT 16269024..16269233,16269559..>16269584)) FT /codon_start=2 FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-013" FT /standard_name="OTTHUMP00000010987" FT /product="zinc finger and BTB domain containing 17" FT /protein_id="CAI19524.1" FT /translation="SKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQGKAGIKIL FT EPEEGSEVSVVTVDDMVTLATEALAATAVTQLTGPATLPAVVPVGAAVTADETEVLKAE FT ISKAVKQVQEEDPNTHILYACDSCGDKFLDANSLAQHVRIHTAQALVMFQTDADFYQQY FT GPGGTWPAGQVLQAGELVFRPRDGAEGQPALAETSPTAPECPPPAE" FT mRNA complement(join(16269251..16269396,16269559..16269879)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-012" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BQ300802.1" FT mRNA complement(join(16269752..16270014,16270094..16270421)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-011" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BU581081.1" FT mRNA complement(join(16269924..16270014,16270094..16270210, FT 16270303..16270888)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-009" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BG681994.1" FT mRNA complement(join(<16268902..16268915,16269024..16269233, FT 16269559..16269689,16269894..16270014,16270094..16270210, FT 16270795..>16270923)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-007" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BG818282.1" FT CDS complement(join(<16268902..16268915,16269024..16269233, FT 16269559..16269689,16269894..16270014,16270094..16270210, FT 16270795..>16270923)) FT /codon_start=3 FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-007" FT /standard_name="OTTHUMP00000010986" FT /product="zinc finger and BTB domain containing 17" FT /protein_id="CAI19525.1" FT /translation="EALPVRLLRPLLLRPHFQDAPPGDPRHGQGAQVPTLRQEVQPGNL FT KRHLRIHSGEKPYVCIHCQRQFADPGALQRHVRIHTGEKPCQCVMCGKAFTQASSLIAH FT VRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIII FT HTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQGKAGIKILEPEEGSEVSVVTVDDMVTLA FT TEALAATAVTQLTVVPVG" FT mRNA complement(join(16269735..16270014,16270094..16270210, FT 16270303..16270390,16270795..16270853)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-010" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BQ100763.1 Em:BQ100779.1 FT Em:BQ100822.1" FT mRNA complement(join(16270094..16270390,16270795..16270898)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-008" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:AA013259.1 Em:AA057307.1 FT Em:AW000858.1" FT mRNA complement(join(16270912..16271095,16271192..16271334, FT 16271432..16271697,16272210..16272579)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-006" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BQ721537.1" FT mRNA complement(join(16271483..16271697,16272210..16272335, FT 16272649..16272811,16273430..16273600)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-005" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BI820446.1" FT mRNA complement(join(16272216..16272335,16272649..16272789, FT 16273430..16273517,16273652..16273787)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-004" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BM713426.1" FT CDS complement(join(16268464..16268747,16268826..16268915, FT 16269024..16269233,16269559..16269689,16269894..16270014, FT 16270094..16270210,16270303..16270390,16270795..16271095, FT 16271192..16271334,16271432..16271697,16272210..16272335, FT 16272649..16272789,16273430..16273618,16274786..16274990)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-001" FT /standard_name="OTTHUMP00000010985" FT /product="zinc finger and BTB domain containing 17" FT /note="match: proteins: Sw:Q13105 Sw:Q60821" FT /protein_id="CAB85445.1" FT /translation="MDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAAC FT SEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDI FT ITACHALKSLAEPATSPGGNAEALATEGGDKRAKEEKVATSTLSRLEQAGRSTPIGPSR FT DLKEERGGQAQSAASGAEQTEKADAPREPPPVELKPDPTSGMAAAEAEAALSESSEQEM FT EVEPARKGEEEQKEQEEQEEEGAGPAEVKEEGSQLENGEAPEENENEESAGTDSGQELG FT SEARGLRSGTYGDRTESKAYGSVIHKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECS FT KAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCEDCGKLF FT TTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQV FT GNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCIHCQRQFADPGAL FT QRHVRIHTGEKPCQCVMCGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANH FT IRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKT FT VHQGKAGIKILEPEEGSEVSVVTVDDMVTLATEALAATAVTQLTVVPVGAAVTADETEV FT LKAEISKAVKQVQEEDPNTHILYACDSCGDKFLDANSLAQHVRIHTAQALVMFQTDADF FT YQQYGPGGTWPAGQVLQAGELVFRPRDGAEGQPALAETSPTAPECPPPAE" FT mRNA complement(join(16272428..16272789,16273430..16273618, FT 16274786..16274992,16279405..16279468)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-002" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BI822188.1" FT mRNA join(AL450998.19:125100..125386,AL450998.19:150052..150372, FT AL450998.19:153438..153914,16235816..16235976, FT 16237596..16237796,16242623..16242774,16245421..16245546, FT 16245899..16246012,16247365..16247478,16248744..16248844, FT 16254586..16262761,16263658..16264140,16264307..16264501, FT 16265213..16265371,16265791..16266955) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-001" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:AA004363.1 Em:AW371149.1 FT Em:AW955348.1 Em:BF818561.1 Em:BI024731.1 Em:BM801786.1 FT Em:BM831808.1 Em:BM832329.1 Em:BU631681.1 Em:BU931965.1 FT Em:CA418834.1 Em:T33276.1" FT /note="match: cDNAs: Em:AB023146.1 Em:AB055980.1 FT Em:AF356524.1 Em:AK092332.1 Em:AK127577.1 Em:AL096858.1" FT CDS join(AL450998.19:125304..125386,AL450998.19:150052..150372, FT AL450998.19:153438..153914,16235816..16235976, FT 16237596..16237796,16242623..16242774,16245421..16245546, FT 16245899..16246012,16247365..16247478,16248744..16248844, FT 16254586..16262761,16263658..16264140,16264307..16264501, FT 16265213..16265371,16265791..16265922) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-001" FT /standard_name="OTTHUMP00000010982" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: proteins: Sw:Q96T58" FT /protein_id="CAI19526.1" FT /translation="MVRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEG FT GVAAFVDFVDIKSAQKAHNSVNKMGDRDLRTDYNEPGTIPSAARGLDDTVSIASRSREV FT SGFRGGGGGPAYGPPPSLHAREGRYERRLDGASDNRERAYEHSAYGHHERGTGGFDRTR FT HYDQDYYRDPRERTLQHGLYYASRSRSPNRFDAHDPRYEPRAREQFTLPSVVHRDIYRD FT DITREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQASRPTRSPSGSGSRSRSSSS FT DSISSSSSTSSDSSDSSSSSSDDSPARSVQSAAVPAPTSQLLSSLEKDEPRKSFGIKVQ FT NLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLVFFRQQEDQEKALTASKGK FT LFFGMQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIF FT QRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTN FT CVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKGRK FT IGGNKIKVDFANRESQLAFYHCMEKSGQDIRDFYEMLAERREERRASYDYNQDRTYYES FT VRTPGTYPEDSRRDYPARGREFYSEWETYQGDYYESRYYDDPREYRDYRNDPYEQDIRE FT YSYRQRERERERERFESDRDRDHERRPIERSQSPVHLRRPQSPGASPSQAERLPSDSER FT RLYSRSSDRSGSCSSLSPPRYEKLDKSRLERYTKNEKTDKERTFDPERVERERRLIRKE FT KVEKDKTDKQKRKGKVHSPSSQSSETDQENEREQSPEKPRSCNKLSREKADKEGIAKNR FT LELMPCVVLTRVKEKEGKVIDHTPVEKLKAKLDNDTVKSSALDQKLQVSQTEPAKSDLS FT KLESVRMKVPKEKGLSSHVEVVEKEGRLKARKHLKPEQPADGVSAVDLEKLEARKRRFA FT DSNLKAEKQKPEVKKSSPEMEDARVLSKKQPDVSSREVILLREGEAERKPVRKEILKRE FT SKKIKLDRLNTVASPKDCQELASISVGSGSRPSSDLQARLGELAGESVENQEVQSKKPI FT PSKPQLKQLQVLDDQGPEREDVRKNYCSLRDETPERKSGQEKSHSVNTEEKIGIDIDHT FT QSYRKQMEQSRRKQQMEMEIAKSEKFGSPKKDVDEYERRSLVHEVGKPPQDVTDDSPPS FT KKKRMDHVDFDICTKRERNYRSSRQISEDSERTGGSPSVRHGSFHEDEDPIGSPRLLSV FT KGSPKVDEKVLPYSNITVREESLKFNPYDSSRREQMADMAKIKLSVLNSEDELNRWDSQ FT MKQDAGRFDVSFPNSIIKRDSLRKRSVRDLEPGEVPSDSDEDGEHKSHSPRASALYESS FT RLSFLLRDREDKLRERDERLSSSLERNKFYSFALDKTITPDTKALLERAKSLSSSREEN FT WSFLDWDSRFANFRNNKDKEKVDSAPRPIPSWYMKKKKIRTDSEGKMDDKKEDHKEEEQ FT ERQELFASRFLHSSIFEQDSKRLQHLERKEEDSDFISGRIYGKQTSEGANSTTDSIQEP FT VVLFHSRFMELTRMQQKEKEKDQKPKEVEKQEDTENHPKTPESAPENKDSELKTPPSVG FT PPSVTVVTLESAPSALEKTTGDKTVEAPLVTEEKTVEPATVSEEAKPASEPAPAPVEQL FT EQVDLPPGADPDKEAAMMPAGVEEGSSGDQPPYLDAKPPTPGASFSQAESNVDPEPDST FT QPLSKPAQKSEEANEPKAEKPDATADAEPDANQKAEAAPESQPPASEDLEVDPPVAAKD FT KKPNKSKRSKTPVQAAAVSIVEKPVTRKSERIDREKLKRSNSPRGEAQKLLELKMEAEK FT ITRTASKNSAADLEHPEPSLPLSRTRRRNVRSVYATMGDHENRSPVKEPVEQPRVTRKR FT LERELQEAAAVPTTPRRGRPPKTRRRADEEEENEAKEPAETLKPPEGWRSPRSQKTAAG FT GGPQGKKGKNEPKVDATRPEATTEVGPQIGVKESSMEPKAAEEEAGSEQKRDRKDAGTD FT KNPPETAPVEVVEKKPAPEKNSKSKRGRSRNSRLAVDKSASLKNVDAAVSPRGAAAQAG FT ERESGVVAVSPEKSESPQKEDGLSSQLKSDPVDPDKEPEKEDVSASGPSPEATQLAKQM FT ELEQAVEHIAKLAEASASAAYKADAPEGLAPEDRDKPAHQASETELAAAIGSIINDISG FT EPENFPAPPPYPGESQTDLQPPAGAQALQPSEEGMETDEAVSGILETEAATESSRPPVN FT APDPSAGPTDTKEARGNSSETSHSVPEAKGSKEVEVTLVRKDKGRQKTTRSRRKRNTNK FT KVVAPVESHVPESNQAQGESPAANEGTTVQHPEAPQEEKQSEKPHSTPPQSCTSDLSKI FT PSTENSSQEISVEERTPTKASVPPDLPPPPQPAPVDEEPQARFRVHSIIESDPVTPPSD FT PSIPIPTLPSVTAAKLSPPVASGGIPHQSPPTKVTEWITRQEEPRAQSTPSPALPPDTK FT ASDVDTSSSTLRKILMDPKYVSATSVTSTSVTTAIAEPVSAAPCLHEAPPPPVDSKKPL FT EEKTAPPVTNNSEIQASEVLVAADKEKVAPVIAPKITSVISRMPVSIDLENSQKITLAK FT PAPQTLTGLVSALTGLVNVSLVPVNALKGPVKGSVTTLKSLVSTPAGPVNVLKGPVNVL FT TGPVNVLTTPVNATVGTVNAAPGTVNAAASAVNATASAVTVTAGAVTAASGGVTATTGT FT VTMAGAVIAPSTKCKQRASANENSRFHPGSMPVIDDRPADAGSGAGLRVNTSEGVVLLS FT YSGQKTEGPQRISAKISQIPPASAMDIEFQQSVSKSQVKPDSVTASQPPSKGPQAPAGY FT ANVATHSTLVLTAQTYNASPVISSVKADRPSLEKPEPIHLSVSTPVTQGGTVKVLTQGI FT NTPPVLVHNQLVLTPSIVTTNKKLADPVTLKIETKVLQPANLGSTLTPHHPPALPSKLP FT TEVNHVPSGPSIPADRTVSHLAAAKLDAHSPRPSGPGPSSFPRASHPSSTASTALSTNA FT TVMLAAGIPVPQFISSIHPEQSVIMPPHSITQTVSLSHLSQGEVRMNTPTLPSITYSIR FT PEALHSPRAPLQPQQIEVRAPQRASTPQPAPAGVPALASQHPPEEEVHYHLPVARATAP FT VQSEVLVMQSEYRLHPYTVPRDVRIMVHPHVTAVSEQPRAADGVVKVPPASKAPQQPGK FT EAAKTPDAKAAPTPTPAPVPVPVPLPAPAPAPHGEARILTVTPSNQLQGLPLTPPVVVT FT HGVQIVHSSGELFQEYRYGDIRTYHPPAQLTHTQFPAASSVGLPSRTKTAAQGPPPEGE FT PLQPPQPVQSTQPAQPAPPCPPSQLGQPGQPPSSKMPQVSQEAKGTQTGVEQPRLPAGP FT ANRPPEPHTQVQRAQAETGPTSFPSPVSVSMKPDLPVSLPTQTAPKQPLFVPTTSGPST FT PPGLVLPHTEFQPAPKQDSSPHLTSQRPVDMVQLLKKYPIVWQGLLALKNDTAAVQLHF FT VSGNNVLAHRSLPLSEGGPPLRIAQRMRLEATQLEGVARRMTVETDYCLLLALPCGRDQ FT EDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAP FT DLLASISNISPHLMIVIASV" FT mRNA join(AL450998.19:150738..151631,AL450998.19:153438..153914, FT 16235816..16235976,16237596..>16237796) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-002" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:AL691572.1 Em:BM454742.1 FT Em:BQ881109.1" FT CDS join(AL450998.19:151351..151631,AL450998.19:153438..153914, FT 16235816..16235976,16237596..>16237796) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-002" FT /standard_name="OTTHUMP00000010983" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /protein_id="CAI19527.1" FT /translation="MNVDKFLIVCYLKKEVWGFESYSLSGTTCFQWNYFVWSLRFFFSC FT GSSKYHLTPLPIKKVDYPHKRGQNWGSYVHNSLPRFNWDYRSCFHTWKRASDNRERAYE FT HSAYGHHERGTGGFDRTRHYDQDYYRDPRERTLQHGLYYASRSRSPNRFDAHDPRYEPR FT AREQFTLPSVVHRDIYRDDITREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLASQAS FT RPTRSPSGSGSRSRSSSSDSISSSSSTSSDSSDSSSSSSDDSPARSVQSAAVPAPTSQL FT LSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKVTSVQIHGTSEERYGLV FT FFRQQEDQEKALTASKGKLFFGMQIEVTAWIGP" FT mRNA join(AL450998.19:<153812..153914,16235819..16235976, FT 16237596..16237796,16242623..16242774,16245421..16245546, FT 16245899..16246012,16247365..>16247401) FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-004" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /note="match: ESTs: Em:BQ213242.1" FT CDS join(AL450998.19:<153812..153914,16235819..16235976, FT 16237596..16237796,16242623..16242774,16245421..16245546, FT 16245899..16246012,16247365..>16247401) FT /codon_start=3 FT /gene="SPEN" FT /locus_tag="RP1-134O19.1-004" FT /standard_name="OTTHUMP00000010984" FT /product="spen homolog, transcriptional regulator FT (Drosophila)" FT /protein_id="CAI19528.1" FT /translation="QASRPTRSPSGSGSRSRSSSSDSISSSSSTSSDSDSSSSSSDDSP FT ARSVQSAAVPAPTSQLLSSLEKDEPRKSFGIKVQNLPVRSTDTSLKDGLFHEFKKFGKV FT TSVQIHGTSEERYGLVFFRQQEDQEKALTASKGKLFFGMQIEVTAWIGPETESENEFRP FT LDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQY FT CDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGP FT VVKVVFDRLKGMALV" FT misc_feature 16295268..16404644 FT /note="annotated region of clone" FT CDS join(16296124..16296365,16296439..16296691) FT /pseudo FT /locus_tag="RP11-5P18.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q7Q020 Tr:Q7SZ07 Tr:Q8C784 FT Tr:Q8K0V1 Tr:Q8NHV5 Tr:Q9VW61" FT misc_feature 16297267 FT /note="Clone_right_end: RP1-134O19" FT mRNA complement(join(AL034555.2:57996..58379, FT AL034555.2:58458..58547,AL034555.2:58656..58865, FT AL034555.2:59191..59321,AL034555.2:59526..59646, FT AL034555.2:59726..59842,AL034555.2:59935..60022, FT AL034555.2:60427..60727,AL034555.2:60824..60966, FT AL034555.2:61064..61329,AL034555.2:61842..61967, FT AL034555.2:62281..62421,AL034555.2:63062..63250, FT AL034555.2:64418..64624,16299534..16299620, FT 16302478..16302621)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-001" FT /product="zinc finger and BTB domain containing 17" FT /note="match: cDNAs: Em:U20647.1 Em:Y09723.1" FT /note="match: ESTs: Em:AA775292.1 Em:AA983315.1 FT Em:AI341325.1 Em:AI373909.1 Em:AI689879.1 Em:AL702979.1 FT Em:AU132383.1 Em:AW297358.1 Em:AW408296.1 Em:BE378389.1 FT Em:BG326594.1 Em:BG471344.1 Em:BG476438.1 Em:BG722344.1 FT Em:BG723037.1 Em:BI826878.1 Em:BM717249.1 Em:BQ575263.1 FT Em:BU683941.1" FT mRNA complement(join(AL034555.2:61973..62421, FT AL034555.2:63062..63250,AL034555.2:64418..64624, FT 16299534..16299620,16302478..16302599)) FT /gene="ZBTB17" FT /locus_tag="RP1-134O19.2-003" FT /product="zinc finger and BTB domain containing 17" FT /note="match: ESTs: Em:BX439851.1 Em:BX439852.1" FT CDS 16314677..16314936 FT /pseudo FT /locus_tag="RP11-5P18.3-001" FT /product="pseudogene similar to part of carboxypeptidase D FT (CPD)" FT /note="match: proteins: Sw:O75976 Sw:O75976 Sw:O75976 FT Sw:O89001 Sw:Q9JHW1 Sw:Q9JHW1" FT CDS join(16316366..16316486,16317166..16317260, FT 16317646..16317711,16318173..16318272,16318658..16318805, FT 16319791..16319971,16320056..16320236,16321177..16321246) FT /pseudo FT /locus_tag="RP11-5P18.2-001" FT /product="ubiquitin specific protease 6 (Tre-2 oncogene) FT (USP6) pseudogene" FT /note="match: proteins: Sw:P35125 Sw:P35125 Sw:Q8IZP1 FT Tr:Q15635" FT mRNA join(16330731..16330880,16332414..16335302) FT /gene="C1orf64" FT /locus_tag="RP11-5P18.4-001" FT /product="chromosome 1 open reading frame 64" FT /note="match: ESTs: Em:AI373462.1 Em:AI497700.1 FT Em:AI791442.1 Em:AI820748.1 Em:AW016669.1 Em:AW299952.1 FT Em:AW972463.1 Em:BF680076.1 Em:BX097668.1" FT /note="match: cDNAs: Em:AK127425.1 Em:BC017946.1" FT CDS join(16330799..16330880,16332414..16332841) FT /gene="C1orf64" FT /locus_tag="RP11-5P18.4-001" FT /standard_name="OTTHUMP00000011115" FT /product="chromosome 1 open reading frame 64" FT /note="match: proteins: Sw:Q8NEQ6" FT /protein_id="CAI16132.1" FT /translation="MAPSEDPRDWRANLKGTIRETGLETSSGGKLAGHQKTVPTAHLTF FT VIDCTHGKQLSLAATASPPQAPSPNRGLVTPPMKTYIVFCGENWPHLTRVTPMGGGCLA FT QARATLPLCRGSVASASFPVSPLCPQEVPEAKGKPVKAAPVRSSTWGTVKDSLKALSSC FT VCGQAD" FT mRNA complement(join(16332655..16332841,16332888..16333166)) FT /locus_tag="RP11-5P18.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI341601.1 Em:AI632147.1 FT Em:AW590457.1" FT polyA_signal 16333160..16333165 FT polyA_signal 16333164..16333169 FT polyA_site 16333190 FT polyA_site complement(16340523) FT polyA_signal complement(16340539..16340544) FT mRNA complement(join(16340523..16342254,16343569..16344538)) FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-004" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /note="match: ESTs: Em:BE294281.1 Em:BE297363.1 FT Em:BF308978.1 Em:BG825872.1 Em:BG828020.1 Em:BI113871.1" FT /note="match: cDNAs: Em:AK075151.1 Em:AL832181.1" FT mRNA complement(join(16340523..16342254,16343569..16343702, FT 16344260..16345285)) FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-002" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /note="match: ESTs: Em:AI369936.1 Em:AL598891.1 FT Em:AL598931.1 Em:AL601326.1 Em:AL601349.1 Em:AL602930.1 FT Em:AW082736.1 Em:BM985044.1 Em:BQ719019.1 Em:BU624626.1 FT Em:BX500616.1 Em:BX503242.1" FT /note="match: cDNAs: Em:AF155908.1 Em:AJ243191.1 FT Em:AK030025.1 Em:AK057295.1 Em:AK086011.1 Em:AK095911.1 FT Em:BC006319.2" FT CDS complement(join(16342075..16342254,16343569..16343702, FT 16344260..16344722)) FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-002" FT /standard_name="OTTHUMP00000011123" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /note="match: proteins: Sw:P35385 Sw:Q9QUK5 Sw:Q9UBY9" FT /protein_id="CAI16133.1" FT /translation="MSGCELSPLGLRVGLSAGPAHGRRFPAPSGPWRGLNLASRQGAGP FT KPRDSRPYKAAAVGAWHARPEACAHTLSCPALARLGRARRRPWMSHRTSSTFRAERSFH FT SSSSSSSSSTSSSASRALPAQDPPMEKALSMFSDDFGSFMRPHSEPLAFPARPGGAGNI FT KTLGDAYEFAVDVRDFSPEDIIVTTSNNHIEVRAEKLAADGTVMNTFAHKCQLPEDVDP FT TSVTSALREDGSLTIRARRHPHTEHVQQTFRTEIKI" FT mRNA complement(join(16340523..16342254,16343584..16343702, FT 16344260..>16344536)) FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-003" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /note="match: cDNAs: Em:BX537990.1" FT CDS complement(join(16342075..16342254,16343584..16343702, FT 16344260..>16344536)) FT /codon_start=1 FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-003" FT /standard_name="OTTHUMP00000011124" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /protein_id="CAI16134.1" FT /translation="ARPEACAHTLSCPALARLGRARRRPWMSHRTSSTFRAERSFHSSS FT SSSSSSTSSSASRALPAQDPPMEKALSMFSDDFGSFMRPHSEPLAFPARPGGAGNIKTL FT GDAYEFAVDVRDFSPEDIIVTTSNNHIELAADGTVMNTFAHKCQLPEDVDPTSVTSALR FT EDGSLTIRARRHPHTEHVQQTFRTEIKI" FT mRNA complement(join(16341994..16342254,16343569..16343714, FT 16344260..>16344500)) FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-005" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /note="match: ESTs: Em:BI517445.1" FT CDS complement(join(16342075..16342254,16343569..16343714, FT 16344260..>16344500)) FT /codon_start=1 FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-005" FT /standard_name="OTTHUMP00000011125" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /protein_id="CAI16135.1" FT /translation="PALARLGRARRRPWMSHRTSSTFRAERSFHSSSSSSSSSTSSSAS FT RALPAQDPPMEKALSMFSDDFGSFMRPHSEPLAFPAHPTARPGGAGNIKTLGDAYEFAV FT DVRDFSPEDIIVTTSNNHIEVRAEKLAADGTVMNTFAHKCQLPEDVDPTSVTSALREDG FT SLTIRARRHPHTEHVQQTFRTEIKI" FT mRNA join(16345370..16345469,16346531..16346728, FT 16347526..16347589,16347792..16348008,16348486..16348558, FT 16349108..16349214,16350295..16350423,16351354..16351386, FT 16352603..16352742,16353031..16353108,16353192..16353270, FT 16353805..16353930,16354316..16354400,16354513..16354614, FT 16355215..16355340,16355621..16355794,16356226..16356295, FT 16356460..16356570,16356956..16357169,16358205..16358338, FT 16358698..16358786,16358938..16359021,16359665..16359751, FT 16360106..16360545) FT /gene="CLCNKA" FT /locus_tag="RP11-5P18.7-003" FT /product="chloride channel Ka" FT /note="match: ESTs: Em:BI465284.1 Em:BI829444.1 FT Em:BM924114.1" FT /note="match: cDNAs: Em:BC035373.1" FT mRNA complement(join(16340523..16342254,16343569..16343702, FT 16344260..16344347,16345629..16346089)) FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-001" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /note="match: ESTs: Em:AA037510.1 Em:AA397963.1 FT Em:AA723983.1 Em:AI077906.1 Em:AI338879.1 Em:AL694275.1" FT /note="match: cDNAs: Em:AK092275.1 Em:AX747447.1" FT CDS complement(join(16342075..16342254,16343569..16343702, FT 16344260..16344347,16345629..16345964)) FT /gene="HSPB7" FT /locus_tag="RP11-5P18.6-001" FT /standard_name="OTTHUMP00000011122" FT /product="heat shock 27kDa protein family, member 7 FT (cardiovascular)" FT /note="match: proteins: Tr:Q8N241" FT /protein_id="CAI16136.1" FT /translation="MGRQVNPRPRGNCQLDREEGTQQRVTAHRKTMSHCQVLWEDKDSQ FT CWGHLDWVWAHVSRSSQRGLPGGGGIGADLGRKGRIWRGQQRPLTATWAEQRAWPPLRM FT ASTLAQGKDPPMEKALSMFSDDFGSFMRPHSEPLAFPARPGGAGNIKTLGDAYEFAVDV FT RDFSPEDIIVTTSNNHIEVRAEKLAADGTVMNTFAHKCQLPEDVDPTSVTSALREDGSL FT TIRARRHPHTEHVQQTFRTEIKI" FT mRNA join(16348366..16348413,16348486..16348558, FT 16349108..16349214,16350295..16350423,16351258..16351386, FT 16352603..16352742,16353031..16353108,16353192..16353270, FT 16353805..16353930,16354316..16354400,16354513..16354614, FT 16355256..16355340,16355621..16355794,16356226..16356295, FT 16356460..16356570,16356956..16357169,16358205..16358338, FT 16358698..16358786,16358941..16359021,16359665..16359751, FT 16360106..16360545) FT /gene="CLCNKA" FT /locus_tag="RP11-5P18.7-002" FT /product="chloride channel Ka" FT /note="match: ESTs: Em:AA399181.1 Em:BI761758.1" FT /note="match: cDNAs: Em:BC053869.1" FT mRNA join(16348408..16348558,16349108..16349214, FT 16350295..16350423,16351258..16351386,16352603..16352752, FT 16353031..16353091) FT /gene="CLCNKA" FT /locus_tag="RP11-5P18.7-004" FT /product="chloride channel Ka" FT /note="match: ESTs: Em:AU141678.1" FT mRNA join(16348547..16348558,16349108..16349214, FT 16350295..16350423,16351258..16351386,16352603..16352742, FT 16353031..16353108,16353192..16353270,16353805..16353930, FT 16354316..16354400,16354513..16354614,16355256..16355340, FT 16355621..16355794,16356226..16356295,16356460..16356570, FT 16356956..16357169,16358205..16358338,16358698..16358786, FT 16358938..16359021,16359665..16359751,16360106..16360545) FT /gene="CLCNKA" FT /locus_tag="RP11-5P18.7-001" FT /product="chloride channel Ka" FT /note="match: ESTs: Em:AL035950.1" FT /note="match: cDNAs: Em:BC048282.1 Em:Z30643.1" FT CDS join(16349115..16349214,16350295..16350423, FT 16351258..16351386,16352603..16352742,16353031..16353108, FT 16353192..16353270,16353805..16353930,16354316..16354400, FT 16354513..16354614,16355256..16355340,16355621..16355794, FT 16356226..16356295,16356460..16356570,16356956..16357169, FT 16358205..16358338,16358698..16358786,16358938..16359021, FT 16359665..16359751,16360106..16360153) FT /gene="CLCNKA" FT /locus_tag="RP11-5P18.7-001" FT /standard_name="OTTHUMP00000011118" FT /product="chloride channel Ka" FT /note="match: proteins: Sw:P51800 Sw:P51800" FT /protein_id="CAI16137.1" FT /translation="MEELVGLREGFSGDPVTLQELWGPCPHIRRAIQGGLEWLKQKVFR FT LGEDWYFLMTLGVLMALVSYAMNFAIGCVVRAHQWLYREIGDSHLLRYLSWTVYPVALV FT SFSSGFSQSITPSSGGSGIPELKTMLAGVILEDYLDIKNFGAKVVGLSCTLATGSTLFL FT GKVGPFVHLSVMIAAYLGRVRTTTIGEPENKSKQNEMLVAAAAVGVATVFAAPFSGVLF FT SIEVMSSHFSVRDYWRGFFAATCGAFIFRLLAVFNSEQETITSLYKTSFRVDVPFDLPE FT IFFFVALGGICGVLSCAYLFCQRTFLSFIKTNRYSSKLLATSKPVYSALATLLLASITY FT PPGVGHFLASRLSMKQHLDSLFDNHSWALMTQNSSPPWPEELDPQHLWWEWYHPRFTIF FT GTLAFFLVMKFWMLILATTIPMPAGYFMPIFILGAAIGRLLGEALAVAFPEGIVTGGVT FT NPIMPGGYALAGAAAFSGAVTHTISTALLAFELTGQIVHALPVLMAVLAANAIAQSCQP FT SFYDGTIIVKKLPYLPRILGRNIGSHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDV FT TEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARGCPTEPVTLTL FT FSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAISNLTNPPAPK" FT CDS join(16349115..16349214,16350295..16350423, FT 16351258..16351386,16352603..16352742,16353031..16353108, FT 16353192..16353270,16353805..16353930,16354316..16354400, FT 16354513..16354614,16355256..16355340,16355621..16355794, FT 16356226..16356295,16356460..16356570,16356956..16357169, FT 16358205..16358338,16358698..16358786,16358941..16359021, FT 16359665..16359751,16360106..16360153) FT /gene="CLCNKA" FT /locus_tag="RP11-5P18.7-002" FT /standard_name="OTTHUMP00000011119" FT /product="chloride channel Ka" FT /protein_id="CAI16138.1" FT /translation="MEELVGLREGFSGDPVTLQELWGPCPHIRRAIQGGLEWLKQKVFR FT LGEDWYFLMTLGVLMALVSYAMNFAIGCVVRAHQWLYREIGDSHLLRYLSWTVYPVALV FT SFSSGFSQSITPSSGGSGIPELKTMLAGVILEDYLDIKNFGAKVVGLSCTLATGSTLFL FT GKVGPFVHLSVMIAAYLGRVRTTTIGEPENKSKQNEMLVAAAAVGVATVFAAPFSGVLF FT SIEVMSSHFSVRDYWRGFFAATCGAFIFRLLAVFNSEQETITSLYKTSFRVDVPFDLPE FT IFFFVALGGICGVLSCAYLFCQRTFLSFIKTNRYSSKLLATSKPVYSALATLLLASITY FT PPGVGHFLASRLSMKQHLDSLFDNHSWALMTQNSSPPWPEELDPQHLWWEWYHPRFTIF FT GTLAFFLVMKFWMLILATTIPMPAGYFMPIFILGAAIGRLLGEALAVAFPEGIVTGGVT FT NPIMPGGYALAGAAAFSGAVTHTISTALLAFELTGQIVHALPVLMAVLAANAIAQSCQP FT SFYDGTIIVKKLPYLPRILGRNIGSHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDV FT TEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQCLQDILARGCPTEPVTLTLF FT SETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAISNLTNPPAPK" FT mRNA join(16353334..16353404,16353805..16353930, FT 16354316..16354400,16354513..16354614,16355256..16355340, FT 16355621..16355794,16356226..16356295,16356460..16356570) FT /gene="CLCNKA" FT /locus_tag="RP11-5P18.7-005" FT /product="chloride channel Ka" FT /note="match: ESTs: Em:BI519982.1" FT polyA_signal 16360527..16360532 FT polyA_site 16360545 FT CDS complement(join(16361673..16361953,16362731..16362841, FT 16363107..16363288,16366098..16366191,16366489..16366524)) FT /pseudo FT /locus_tag="RP11-5P18.10-001" FT /product="pseudogene similar to part of novel protein FT FLJ36766" FT /note="match: proteins: Tr:Q8N3X3 Tr:Q8N9P9 Tr:Q96AQ9" FT mRNA join(16370272..16370375,16370981..16371087, FT 16372053..16372181,16373030..16373158,16374400..16374539, FT 16374838..16374915,16374999..16375077,16375615..16375740, FT 16376113..16376197,16376310..16376411,16377011..16377095, FT 16377370..16377543,16377973..16378042,16378205..16378315, FT 16378693..16378906,16380134..16380267,16381930..16382018, FT 16382170..16382253,16382917..16383003,16383364..16383803) FT /gene="CLCNKB" FT /locus_tag="RP11-5P18.8-001" FT /product="chloride channel Kb" FT /note="match: ESTs: Em:AI245730.1 Em:AI311009.1 FT Em:AI631912.1 Em:AI740848.1 Em:AI817459.1 Em:AL035969.1 FT Em:BF437088.1 Em:BI771730.1 Em:BM083519.1 Em:BQ346960.1 FT Em:BQ440452.1 Em:T19595.1" FT /note="match: cDNAs: Em:BC033806.1 Em:S80315.1 Em:Z30644.1" FT CDS join(16370988..16371087,16372053..16372181, FT 16373030..16373158,16374400..16374539,16374838..16374915, FT 16374999..16375077,16375615..16375740,16376113..16376197, FT 16376310..16376411,16377011..16377095,16377370..16377543, FT 16377973..16378042,16378205..16378315,16378693..16378906, FT 16380134..16380267,16381930..16382018,16382170..16382253, FT 16382917..16383003,16383364..16383411) FT /gene="CLCNKB" FT /locus_tag="RP11-5P18.8-001" FT /standard_name="OTTHUMP00000011120" FT /product="chloride channel Kb" FT /note="match: proteins: Sw:P51801" FT /protein_id="CAI16140.1" FT /translation="MEEFVGLREGSSGNPVTLQELWGPCPRIRRGIRGGLEWLKQKLFR FT LGEDWYFLMTLGVLMALVSCAMDLAVESVVRAHQWLYREIGDSHLLRYLSWTVYPVALV FT SFSSGFSQSITPSSGGSGIPEVKTMLAGVVLEDYLDIKNFGAKVVGLSCTLACGSTLFL FT GKVGPFVHLSVMMAAYLGRVRTTTIGEPENKSKQNEMLVAAAAVGVATVFAAPFSGVLF FT SIEVMSSHFSVWDYWRGFFAATCGAFMFRLLAVFNSEQETITSLYKTSFRVDVPFDLPE FT IFFFVALGGLCGILGSAYLFCQRIFFGFIRNNRFSSKLLATSKPVYSALATLVLASITY FT PPSAGRFLASRLSMKQHLDSLFDNHSWALMTQNSSPPWPEELDPQHLWWEWYHPRFTIF FT GTLAFFLVMKFWMLILATTIPMPAGYFMPIFVYGAAIGRLFGETLSFIFPEGIVAGGIT FT NPIMPGGYALAGAAAFSGAVTHTISTALLAFEVTGQIVHALPVLMAVLAANAIAQSCQP FT SFYDGTVIVKKLPYLPRILGRNIGSHRVRVEHFMNHSITTLAKDMPLEEVVKVVTSTDV FT AKYPLVESTESQILVGIVRRAQLVQALKAEPPSWAPGHQQCLQDILAAGCPTEPVTLKL FT SPETSLHEAHNLFELLNLHSLFVTSRGRAVGCVSWVEMKKAISNLTNPPAPK" FT mRNA join(16375284..16375740,16376113..16376197, FT 16376310..16376411,16377011..16377095,16377370..16377543, FT 16377973..16378042,16378205..16378315,16378693..16378906, FT 16380134..16380267,16381930..16382018,16382173..16382253, FT 16382917..16383003,16383364..16383803) FT /gene="CLCNKB" FT /locus_tag="RP11-5P18.8-002" FT /product="chloride channel Kb" FT /note="match: ESTs: Em:BF819725.1" FT /note="match: cDNAs: Em:AK098217.1" FT CDS join(16375467..16375740,16376113..16376197, FT 16376310..16376411,16377011..16377095,16377370..16377543, FT 16377973..16378042,16378205..16378315,16378693..16378906, FT 16380134..16380267,16381930..16382018,16382173..16382253, FT 16382917..16383003,16383364..16383411) FT /gene="CLCNKB" FT /locus_tag="RP11-5P18.8-002" FT /standard_name="OTTHUMP00000011121" FT /product="chloride channel Kb" FT /protein_id="CAI16141.1" FT /translation="MPCPPLLSVPVRAAGEQDRWVREEVTWGGGPTVTGGWGWRAHLRS FT VSPPGVLFSIEVMSSHFSVWDYWRGFFAATCGAFMFRLLAVFNSEQETITSLYKTSFRV FT DVPFDLPEIFFFVALGGLCGILGSAYLFCQRIFFGFIRNNRFSSKLLATSKPVYSALAT FT LVLASITYPPSAGRFLASRLSMKQHLDSLFDNHSWALMTQNSSPPWPEELDPQHLWWEW FT YHPRFTIFGTLAFFLVMKFWMLILATTIPMPAGYFMPIFVYGAAIGRLFGETLSFIFPE FT GIVAGGITNPIMPGGYALAGAAAFSGAVTHTISTALLAFEVTGQIVHALPVLMAVLAAN FT AIAQSCQPSFYDGTVIVKKLPYLPRILGRNIGSHRVRVEHFMNHSITTLAKDMPLEEVV FT KVVTSTDVAKYPLVESTESQILVGIVRRAQLVQALKAEPPSWAPGHQCLQDILAAGCPT FT EPVTLKLSPETSLHEAHNLFELLNLHSLFVTSRGRAVGCVSWVEMKKAISNLTNPPAPK FT " FT CDS join(<16378818..16378906,16380134..16380267, FT 16381930..16382018,16382173..16382253,16383733..16383780) FT /codon_start=1 FT /gene="CLCNKB" FT /locus_tag="RP11-5P18.8-003" FT /standard_name="OTTHUMP00000038852" FT /product="chloride channel Kb" FT /protein_id="CAI16142.1" FT /translation="AQSCQPSFYDGTVIVKKLPYLPRILGRNIGSHRVRVEHFMNHSIT FT TLAKDMPLEEVVKVVTSTDVAKYPLVESTESQILVGIVRRAQLVQALKAEPPSWAPGHQ FT CLQDILAAGCPTEPVTLKLSPETSLHEAQMPSGVVWFPVRGS" FT mRNA join(<16378818..16378906,16380134..16380267, FT 16381930..16382018,16382173..16382253,16383733..16383803) FT /gene="CLCNKB" FT /locus_tag="RP11-5P18.8-003" FT /product="chloride channel Kb" FT /note="match: ESTs: Em:AI241330.1" FT polyA_signal 16383785..16383790 FT polyA_site 16383803 FT polyA_site complement(16384264) FT polyA_signal complement(16384283..16384288) FT misc_feature 16399556..16400046 FT /note="Single clone region. Sequence generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(16384264..16385212,16385989..16386099, FT 16386364..16386546,16388594..16388687,16388994..16389029, FT 16390016..16390131,16399916..16400121)) FT /gene="FAM131C" FT /locus_tag="RP11-5P18.9-001" FT /product="family with sequence similarity 131, member C" FT /note="match: ESTs: Em:AW450211.1 Em:BI915295.1 FT Em:BM546083.1 Em:CA424474.1 Em:R61730.1 Em:T10170.1 FT Em:T10171.1" FT /note="match: cDNAs: Em:AK094085.1 Em:BC016848.1 FT Em:BC037394.1" FT CDS complement(join(16384932..16385212,16385989..16386099, FT 16386364..16386546,16388594..16388687,16388994..16389029, FT 16390016..16390131,16399916..16399937)) FT /gene="FAM131C" FT /locus_tag="RP11-5P18.9-001" FT /standard_name="OTTHUMP00000011116" FT /product="family with sequence similarity 131, member C" FT /note="match: proteins: Tr:Q8N3X3 Tr:Q8N9P9 Tr:Q96AQ9" FT /protein_id="CAI16143.1" FT /translation="MGSCVSRDLFTSAHKNCPMPQGADPLNPDLPSGRTPTVAPDCVIG FT KDKQMDFCWDPWQRCFQTTNGYLSDSRSRPGNYNVAALATSSLVGVVQSIKDHITKPTA FT MARGRVAHLIEWKGWSAQPAGWELSPAEDEHYCCLPDELREARFAAGVAEQFAITEATL FT SAWSSLDEEELHPENSPQGIVQLQDLESIYLQDSLPSGPSQDDSLQAFSSPSPSPDSCP FT SPEEPPSTAGIPQPPSPELQHRRRLPGAQGPEGGTHPPGSLPSMDSGSLWEEDEVFYN" FT mRNA complement(join(16384774..16385212,16385989..16386099, FT 16386364..16386546,16388594..16388687,16388994..16389029, FT 16399916..16400127)) FT /gene="FAM131C" FT /locus_tag="RP11-5P18.9-002" FT /product="family with sequence similarity 131, member C" FT /note="match: ESTs: Em:AL529663.2" FT misc_feature 16404644 FT /note="Clone_right_end: RP11-5P18" FT misc_feature 16438261..16522358 FT /note="annotated region of clone" FT polyA_site complement(16450832) FT polyA_signal complement(16450853..16450858) FT mRNA complement(join(16459508..16459863,16459976..16460057)) FT /gene="EPHA2" FT /locus_tag="RP11-276H7.1-004" FT /product="EPH receptor A2" FT /note="match: ESTs: Em:BG946341.1" FT misc_feature 16461244..16461330 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(16461055..16461062,16461531..16461684, FT 16462150..16462265,16464348..16464680,16464770..16464925, FT 16472918..16472945)) FT /gene="EPHA2" FT /locus_tag="RP11-276H7.1-003" FT /product="EPH receptor A2" FT /note="match: ESTs: Em:BI831356.1" FT mRNA join(16481706..16482250,16483466..16483824) FT /locus_tag="RP11-276H7.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA652965.1 Em:AI676099.1 FT Em:BF237512.1 Em:BF508918.1 Em:BF510672.1 Em:BG326631.1 FT Em:BM671653.1 Em:CB049766.1" FT mRNA complement(join(16450832..16451815,16455929..16456084, FT 16456721..16456914,16458216..16458365,16458559..16458768, FT 16458873..16458934,16459675..16459863,16459976..16460101, FT 16460355..16460410,16460963..16461062,16461531..16461684, FT 16462150..16462265,16464348..16464680,16464770..16464925, FT 16474873..16475542,16477391..16477458,16482343..16482582)) FT /gene="EPHA2" FT /locus_tag="RP11-276H7.1-001" FT /product="EPH receptor A2" FT /note="match: ESTs: Em:AL138105.1 Em:AW134547.1 FT Em:BE531301.1 Em:BG253705.1 Em:BI831356.1 Em:BM765996.1 FT Em:BM982049.1 Em:BQ100980.1 Em:BQ101148.1 Em:BQ424861.1 FT Em:BQ684233.1 Em:BQ691197.1 Em:BQ890666.1 Em:BU527500.1 FT Em:BU681364.1 Em:BX505869.1 Em:CA312276.1 Em:CB991812.1 FT Em:CD110234.1 Em:CD674959.1" FT /note="match: cDNAs: Em:BC008655.1 Em:BC037166.2 FT Em:M59371.1 Em:U07634.1" FT CDS complement(join(16451710..16451815,16455929..16456084, FT 16456721..16456914,16458216..16458365,16458559..16458768, FT 16458873..16458934,16459675..16459863,16459976..16460101, FT 16460355..16460410,16460963..16461062,16461531..16461684, FT 16462150..16462265,16464348..16464680,16464770..16464925, FT 16474873..16475542,16477391..16477458,16482343..16482427)) FT /gene="EPHA2" FT /locus_tag="RP11-276H7.1-001" FT /standard_name="OTTHUMP00000011117" FT /product="EPH receptor A2" FT /note="match: proteins: Sw:P29317 Sw:Q03145 Tr:Q8N3Z2 FT Tr:Q9PWR5" FT /protein_id="CAH71943.1" FT /translation="MELQAARACFALLWGCALAAAAAAQGKEVVLLDFAAAGGELGWLT FT HPYGKGWDLMQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIFIELKFTVRD FT CNSFPGGASSCKETFNLYYAESDLDYGTNFQKRLFTKIDTIAPDEITVSSDFEARHVKL FT NVEERSVGPLTRKGFYLAFQDIGACVALLSVRVYYKKCPELLQGLAHFPETIAGSDAPS FT LATVAGTCVDHAVVPPGGEEPRMHCAVDGEWLVPIGQCLCQAGYEKVEDACQACSPGFF FT KFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTAVGM FT GAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTV FT SDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSI FT PPPQQSRVWKYEVTYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGA FT GSKVHEFQTLSPEGSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRKNQRARQSPEDVYF FT SKSEQLKPLKTYVDPHTYEDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTS FT SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY FT MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVC FT KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT FT YGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL FT DKLIRAPDSLKTLADFDPRVSIRLPSTSGSEGVPFRTVSEWLESIKMQQYTEHFMAAGY FT TAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLKDQVNTVGIPI" FT mRNA complement(join(16474873..16475542,16482343..16482547)) FT /gene="EPHA2" FT /locus_tag="RP11-276H7.1-002" FT /product="EPH receptor A2" FT /note="match: ESTs: Em:BQ688608.1 Em:BQ691405.1 FT Em:BU196957.1" FT polyA_signal 16483802..16483807 FT polyA_site 16483824 FT mRNA join(16485761..16485921,16487996..16488378) FT /locus_tag="RP11-276H7.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE300727.1" FT misc_feature 16518177..16518299 FT /note="Assembly confirmed by restriction digest data" FT misc_feature complement(16522359..16641184) FT /note="annotated region of clone" FT mRNA complement(join(16618809..16621412,16632298..16632414, FT AL358794.19:480..678)) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-002" FT /product="F-box protein 42" FT /note="match: cDNAs: Em:AL833207.1" FT CDS complement(join(16577165..16578280,16578783..16578899, FT 16579591..16579647,16580130..16580226,16582206..16582316, FT 16583101..16583254,16621278..16621412,16632298..16632414, FT AL358794.19:480..729)) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-001" FT /standard_name="OTTHUMP00000002236" FT /product="F-box protein 42" FT /note="match: proteins: Sw:Q6P3S6 Sw:Q6PDJ6" FT /protein_id="CAI22560.1" FT /translation="MASSSDSEDDSFMAVDQEETVLEGTMDQDEEPHPVLEAEETRHNR FT SMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQW FT ESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIR FT PLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNC FT IVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPH FT PRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEHGAPELW FT CHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMD FT EAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDS FT PVQAISPSTPSAPEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPMDG FT MDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAA FT LSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL FT YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGL FT MDKKQNVKYYPKTNALYFVRAKR" FT mRNA complement(join(16573334..16578280,16578783..16578899, FT 16579591..16579647,16580130..16580226,16582206..16582316, FT 16583101..16583254,16621278..16621412,16632298..16632414, FT AL358794.19:480..746,AL358794.19:37566..37765)) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-001" FT /product="F-box protein 42" FT /note="match: cDNAs: Em:AB037753.1 Em:AK055598.1" FT mRNA complement(join(<16577577..16578280,16578783..16578899, FT 16579591..16579676,16580051..16580088)) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-004" FT /product="F-box protein 42" FT /note="match: ESTs: Em:Z41965.1" FT mRNA complement(join(<16577577..16578280,16578783..16578899, FT 16579591..16579922)) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-003" FT /product="F-box protein 42" FT /note="match: ESTs: Em:AL534909.2" FT CDS complement(join(<16577577..16578280,16578783..16578899, FT 16579591..16579665)) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-003" FT /standard_name="OTTHUMP00000002237" FT /product="F-box protein 42" FT /protein_id="CAI22561.1" FT /translation="MSSPPQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPL FT KVENEEHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPET FT REYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLS FT PGTAAVGGSSLDSPVQAISPSTPSAPEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNW FT DLKPASSSNPMDGMDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAI FT KAMSSKGPSASAALSPPL" FT CDS complement(16567708..16567893) FT /pseudo FT /locus_tag="RP4-733M16.7-001" FT /product="metallothionein-like 1 pseudogene" FT /note="match: proteins: Sw:O19000 Sw:P02795 Sw:P04355 FT Sw:P04732 Sw:P14425 Sw:P68041 Sw:P79379 Sw:P80297 Sw:Q9XST5 FT Tr:Q8WVB5" FT misc_feature complement(16566728..16566732) FT /note="Single clone region. Within alu region. pUC read FT pairs confirm assembly" FT mRNA complement(join(16555170..16555541,16563338..16563495)) FT /gene="C1orf89" FT /locus_tag="RP4-733M16.4-002" FT /product="chromosome 1 open reading frame 89" FT /note="match: ESTs: Em:BF001156.1 Em:CB048455.1 FT Em:CB048456.1" FT mRNA complement(join(16558195..16558792,16559005..16559141, FT 16559388..16559512,16560107..16560259,16563126..16563446)) FT /gene="C1orf89" FT /locus_tag="RP4-733M16.4-001" FT /product="chromosome 1 open reading frame 89" FT /note="match: cDNAs: Em:BC002946.1 Em:BC002946.2 FT Em:BC008702.1" FT CDS complement(join(16558543..16558792,16559005..16559141, FT 16559388..16559512,16560107..16560259,16563126..16563237)) FT /gene="C1orf89" FT /locus_tag="RP4-733M16.4-001" FT /standard_name="OTTHUMP00000002233" FT /product="chromosome 1 open reading frame 89" FT /note="match: proteins: Tr:Q9BU20" FT /protein_id="CAI22562.1" FT /translation="MARPPVPGSVVVPNWHESAEGKEYLACILRKNRRRVFGLLERPVL FT LPPVSIDTASYKIFVSGKSGVGKTALVAKLAGLEVPVVHHETTGIQTTVVFWPAKLQAS FT SRVVMFRFEFWDCGESALKKFDHMLLACMENTDAFLFLFSFTDRASFEDLPGQLARIAG FT EAPGVVRMVIGSKFDQYMHTDVPERDLTAFRQAWELPLLRVKSVPGRRLADGRTLDGRA FT GLADVAHILNGLAEQLWHQDQVAAGLLPNPPESAPE" FT mRNA complement(join(<16558776..16558792,16559005..16559141, FT 16560107..16560259,16563126..>16563154)) FT /gene="C1orf89" FT /locus_tag="RP4-733M16.4-003" FT /product="chromosome 1 open reading frame 89" FT /note="match: ESTs: Em:AW905080.1" FT CDS complement(join(<16558776..16558792,16559005..16559141, FT 16560107..16560259,16563126..>16563154)) FT /codon_start=3 FT /gene="C1orf89" FT /locus_tag="RP4-733M16.4-003" FT /standard_name="OTTHUMP00000035995" FT /product="chromosome 1 open reading frame 89" FT /protein_id="CAI22563.1" FT /translation="CARTAGGCLGCLSGQCCCRLCPLTLPATRSLCPGRVVWARRRWWP FT SWLAWRCLWCTTRPPACMENTDAFLFLFSFTDRASFEDLPGQLARIAGEAPGVVRMVIG FT SKFDQYM" FT misc_feature complement(16556300) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556296) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556291) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556279) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556268) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556261) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556250) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556246) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT misc_feature complement(16556245) FT /note="Possible local misassembly of alu containing reads. FT Overall assembly confirmed by restriction digest" FT mRNA complement(join(16555170..16555558,16555978..16556094)) FT /gene="C1orf134" FT /locus_tag="RP4-733M16.5-001" FT /product="chromosome 1 open reading frame 134" FT /note="match: ESTs: Em:BX112543.1" FT CDS complement(join(16555368..16555558,16555978..16556038)) FT /gene="C1orf134" FT /locus_tag="RP4-733M16.5-001" FT /standard_name="OTTHUMP00000002234" FT /product="chromosome 1 open reading frame 134" FT /protein_id="CAI22564.1" FT /translation="MLCCCPLADALLIFLETGSCFQPGQQSETLSQKQNKTNNKKWAGG FT AGCRPFRLWWVGRSRGAGVQLYSTKKGWILRGKGGTEA" FT mRNA complement(join(16542952..16543104,16543622..16543823)) FT /gene="C1orf224" FT /locus_tag="RP4-733M16.3-002" FT /product="chromosome 1 open reading frame 224" FT /note="match: ESTs: Em:BU656309.1" FT CDS complement(join(16542428..16542556,16542964..16543104, FT 16543622..>16543655)) FT /codon_start=2 FT /gene="C1orf224" FT /locus_tag="RP4-733M16.3-001" FT /standard_name="OTTHUMP00000035997" FT /product="chromosome 1 open reading frame 224" FT /protein_id="CAI22565.1" FT /translation="HVHLGFIIAFENVVFFFLCPNDRLVPDVPALATKITARALPGQAG FT GGRQPGDAVSVSKLRIWAVSQGRSGSWMRGLEFPGDLQTCTATLPCSCLLASVQC" FT mRNA complement(join(16542404..16542556,16542964..16543104, FT 16543622..>16543655)) FT /gene="C1orf224" FT /locus_tag="RP4-733M16.3-001" FT /product="chromosome 1 open reading frame 224" FT /note="match: ESTs: Em:AI972433.1" FT polyA_signal complement(16542421..16542426) FT polyA_site complement(16542404) FT mRNA complement(join(16524599..16525139,16532426..16532578, FT 16532675..16532835,16533443..16533705,16534017..16534093, FT 16534170..16534272,16534439..16534720,16535138..16535578, FT 16538997..16539140)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-002" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: cDNAs: Em:AK091281.1 Em:AX746893.1" FT mRNA complement(join(16524599..16525239,16525645..16525749, FT 16528277..16528356,16528911..16529069,16531254..16531414, FT 16531582..16531671,16531846..16531920,16532033..16532162, FT 16532426..16532578,16532675..16532835,16533443..16533705, FT 16534017..16534093,16534170..16534272,16534439..16534720, FT 16535138..16535578,16538997..16539104)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-001" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: cDNAs: Em:BC040640.1" FT CDS complement(join(16525082..16525239,16525645..16525749, FT 16528277..16528356,16528911..16529069,16531254..16531414, FT 16531582..16531671,16531846..16531920,16532033..16532162, FT 16532426..16532578,16532675..16532835,16533443..16533705, FT 16534017..16534093,16534170..16534272,16534439..16534720, FT 16535138..16535549)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-001" FT /standard_name="OTTHUMP00000002239" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: proteins: Tr:Q8BWA8 Tr:Q8IW93 Tr:Q8N244" FT /protein_id="CAI22566.1" FT /translation="MDCGPPATLQPHLTGPPGTAHHPVAVCQQESLSFAELPALKPPSP FT VCLDLFPVAPEELRAPGSRWSLGTPAPLQGLLWPLSPGGSDTEITSGGMRPSRAGSWPH FT CPGAQPPALEGPWSPRHTQPQRRASHGSEKKSAWRKMRVYQREEVPGCPEAHAVFLEPG FT QVVQEQALSTEEPRVELSGSTRVSLEGPERRRFSASELMTRLHSSLRLGRNSAARALIS FT GSGTGAAREGKASGMEARSVEMSGDRVSRPAPGDSREGDWSEPRLDTQEEPPLGSRSTN FT ERRQSRFLLNSVLYQEYSDVASARELRRQQREEEGPGDEAEGAEEGPGPPRANLSPSSS FT FRAQRSARGSTFSLWQDIPDVRGSGVLATLSLRDCKLQEAKFELITSEASYIHSLSVAV FT GHFLGSAELSECLGAQDKQWLFSKLPEVKSTSERFLQDLEQRLEADVLRFSVCDVVLDH FT CPAFRRVYLPYVTNQAYQERTYQRLLLENPRFPGILARLEESPVCQRLPLTSFLILPFQ FT RITRLKMLVENILKRTAQGSEDEDMATKAFNALKELVQECNASVQSMKRTEELIHLSKK FT IHFEGKIFPLISQARWLVRHGELVELAPLPAAPPAKLKLSSKAVYLHLFNDCLLLSRRK FT ELGKFAVFVHAKMAELQVRDLSLKLQGIPGHVFLLQLLHGQHMKHQFLLRARTESEKQR FT WISALCPSSPQEDKEVISEGEDCPQVQCVRTYKALHPDELTLEKTDILSVRTWTSDGWL FT EGVRLADGEKGWVPQAYVEEISSLSARLRNLRENKRVTSATSKLGEAPV" FT CDS complement(join(16525082..16525139,16532426..16532578, FT 16532675..16532835,16533443..16533705,16534017..16534093, FT 16534170..16534272,16534439..16534720,16535138..16535549)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-002" FT /standard_name="OTTHUMP00000002240" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /protein_id="CAI22567.1" FT /translation="MDCGPPATLQPHLTGPPGTAHHPVAVCQQESLSFAELPALKPPSP FT VCLDLFPVAPEELRAPGSRWSLGTPAPLQGLLWPLSPGGSDTEITSGGMRPSRAGSWPH FT CPGAQPPALEGPWSPRHTQPQRRASHGSEKKSAWRKMRVYQREEVPGCPEAHAVFLEPG FT QVVQEQALSTEEPRVELSGSTRVSLEGPERRRFSASELMTRLHSSLRLGRNSAARALIS FT GSGTGAAREGKASGMEARSVEMSGDRVSRPAPGDSREGDWSEPRLDTQEEPPLGSRSTN FT ERRQSRFLLNSVLYQEYSDVASARELRRQQREEEGPGDEAEGAEEGPGPPRANLSPSSS FT FRAQRSARGSTFSLWQDIPDVRGSGVLATLSLRDCKLQEAKFELITSEASYIHSLSVAV FT GHFLGSAELSECLGAQDKQWLFSKLPEVKSTSERFLQDLEQRLEADVLRFSVCDVVLDH FT CPAFRRVYLPYVTNQAYQERTYQRLLRENKRVTSATSKLGEAPV" FT mRNA complement(join(16524349..16525239,16525645..16525749, FT 16528277..16528356,16528911..16529035,16531254..16531414, FT 16531582..16531671,16531846..16531920,16532033..16532162, FT 16532426..16532578,16532675..16532835,16533443..16533506)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-005" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: ESTs: Em:AL137736.1" FT mRNA complement(join(16532122..16532578,16532675..16532835, FT 16533443..16533477)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-006" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: ESTs: Em:CK429359.1" FT mRNA complement(join(<16531306..16531414,16531582..16531671, FT 16531846..16531920,16532033..16532162,16532426..16532578, FT 16532675..>16533038)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-004" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: ESTs: Em:AL558179.2 Em:BE883117.1 FT Em:BQ072510.1 Em:BU164668.1 Em:BU944643.1 Em:BU956545.1 FT Em:BX374971.1 Em:BX394751.1" FT CDS complement(join(<16531306..16531414,16531582..16531671, FT 16531846..16531920,16532033..16532162,16532426..16532578, FT 16532675..>16533038)) FT /codon_start=3 FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-004" FT /standard_name="OTTHUMP00000002241" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /protein_id="CAI22568.1" FT /translation="RDRGQERLAQFPAAGRGSPGPPGARLGVGLEKGRGREVWRPGVWG FT CEARASEVNWSCPFDPVCALPQAKFELITSEASYIHSLSVAVGHFLGSAELSECLGAQD FT KQWLFSKLPEVKSTSERFLQDLEQRLEADVLRFSVCDVVLDHCPAFRRVYLPYVTNQAY FT QERTYQRLLLENPRFPGILARLEESPVCQRLPLTSFLILPFQRITRLKMLVENILKRTA FT QGSEDEDMATKAFNALKELVQECNASVQSMKRTEELIHLSKKIHFEGKIFPLISQARWL FT VRHGELVELAPLPAAPPAKLKLSSK" FT CDS complement(join(16532422..16532578,16532675..>16533021)) FT /codon_start=1 FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-007" FT /standard_name="OTTHUMP00000035996" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /protein_id="CAI22569.1" FT /translation="ERLAQFPAAGRGSPGPPGARLGVGLEKGRGREVWRPGVWGCEARA FT SEVNWSCPFDPVCALPQAKFELITSEASYIHSLSVAVGHFLGSAELSECLGAQDKQWLF FT SKLPEVKSTSERFLQDLEQRLEADVLRFSVCDVVLDHCPAFRRVYLPYVTNQAYQERTY FT QRLL" FT mRNA complement(join(16532344..16532578,16532675..>16533021)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-007" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: ESTs: Em:CK430208.1" FT mRNA complement(join(16531395..16531414,16531582..16531671, FT 16531846..16531920,16532426..16532578,16532675..16533021)) FT /gene="ARHGEF19" FT /locus_tag="RP4-733M16.1-003" FT /product="Rho guanine nucleotide exchange factor (GEF) 19" FT /note="match: ESTs: Em:BE908604.1" FT mRNA join(16524349..16524711,16524777..16524852) FT /locus_tag="RP4-733M16.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI127333.1" FT polyA_signal complement(16524615..16524620) FT polyA_site complement(16524599) FT polyA_signal complement(16524369..16524374) FT polyA_site complement(16524349) FT misc_feature 16641185..16766133 FT /note="annotated region of clone" FT mRNA join(complement(16641664..16641862), FT AL109627.18:10770..10886,AL109627.18:21772..24375) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-002" FT /product="F-box protein 42" FT /note="match: cDNAs: Em:AL833207.1" FT CDS join(complement(16641664..16641913), FT AL109627.18:10770..10886,AL109627.18:21772..21906, FT AL109627.18:59930..60083,AL109627.18:60868..60978, FT AL109627.18:62958..63054,AL109627.18:63537..63593, FT AL109627.18:64285..64401,AL109627.18:64904..66019) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-001" FT /standard_name="OTTHUMP00000002236" FT /product="F-box protein 42" FT /note="match: proteins: Sw:Q6P3S6 Sw:Q6PDJ6" FT /protein_id="CAH73774.1" FT /translation="MASSSDSEDDSFMAVDQEETVLEGTMDQDEEPHPVLEAEETRHNR FT SMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQW FT ESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIR FT PLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNC FT IVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPH FT PRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEHGAPELW FT CHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMD FT EAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDS FT PVQAISPSTPSAPEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPMDG FT MDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAA FT LSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPL FT YQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGL FT MDKKQNVKYYPKTNALYFVRAKR" FT misc_feature 16643184 FT /note="Clone_right_end: RP4-733M16" FT mRNA join(complement(16678750..16678949), FT complement(16641664..16641930),AL109627.18:10770..10886, FT AL109627.18:21772..21906,AL109627.18:59930..60083, FT AL109627.18:60868..60978,AL109627.18:62958..63054, FT AL109627.18:63537..63593,AL109627.18:64285..64401, FT AL109627.18:64904..69850) FT /gene="FBXO42" FT /locus_tag="RP4-733M16.6-001" FT /product="F-box protein 42" FT /note="match: cDNAs: Em:AB037753.1 Em:AK055598.1" FT mRNA join(16693726..16693803,16719723..16719873, FT 16721533..16724640) FT /gene="C1orf144" FT /locus_tag="RP11-430L17.2-002" FT /product="chromosome 1 open reading frame 144" FT /note="match: cDNAs: Em:BX640985.1" FT mRNA join(16693738..16693803,16717870..16717919, FT 16719723..16719977,16721533..16724637) FT /gene="C1orf144" FT /locus_tag="RP11-430L17.2-001" FT /product="chromosome 1 open reading frame 144" FT /note="match: cDNAs: Em:AB097046.1 Em:BC010631.1" FT mRNA join(16693742..16693803,16713550..16713620, FT 16717870..16717919,16719723..16719977,16721533..16721885) FT /gene="C1orf144" FT /locus_tag="RP11-430L17.2-004" FT /product="chromosome 1 open reading frame 144" FT /note="match: ESTs: Em:BI760326.1" FT CDS join(16693753..16693803,16717870..16717919, FT 16719723..16719977,16721533..16721635) FT /gene="C1orf144" FT /locus_tag="RP11-430L17.2-001" FT /standard_name="OTTHUMP00000002235" FT /product="chromosome 1 open reading frame 144" FT /note="match: proteins: Tr:Q7Z424 Tr:Q8BT36 Tr:Q8TBV3 FT Tr:Q8TBV3 Tr:Q9Y403" FT /protein_id="CAH73775.1" FT /translation="MEDEEVAESWEEAADSGEIDRRLEKKLKITQKESRKSKSPPKVPI FT VIQDDSLPAGPPPQIRILKRPTSNGVVSSPNSTSRPTLPVKSLAQREAEYAEARKRILG FT SASPEEEQEKPILDRPTRISQPEDSRQPNNVIRQPLGPDGSQGFKQRR" FT mRNA join(16694206..16694510,16717870..16717919, FT 16719726..16719977,16721533..16721768) FT /gene="C1orf144" FT /locus_tag="RP11-430L17.2-003" FT /product="chromosome 1 open reading frame 144" FT CDS complement(16695645..16696025) FT /pseudo FT /locus_tag="RP11-430L17.1-001" FT /product="ribosomal protein L22 (RPL22) pseudogene" FT /note="match: proteins: Sw:P13732 Sw:P35268 Sw:P47198 FT Sw:P50886 Sw:P50887 Sw:P50887 Sw:P52865 Sw:P67984 Sw:Q90YU6 FT Sw:Q9D7S7 Tr:Q7Z4W8 Tr:Q8ISQ5 Tr:Q8T3X3 Tr:Q98TF8 Tr:Q9UAN1 FT Tr:Q9W1T1" FT /db_xref="PSEUDO:CAH73776.1" FT polyA_signal 16722845..16722850 FT polyA_site 16722863 FT polyA_signal 16724603..16724608 FT polyA_site 16724640 FT CDS complement(join(16751592..16751705,16752019..16752226, FT 16754359..16754510,16757738..16757866)) FT /gene="SPATA21" FT /locus_tag="RP11-430L17.3-002" FT /standard_name="OTTHUMP00000002440" FT /product="spermatogenesis associated 21" FT /protein_id="CAH73777.1" FT /translation="MDNRNTQMYTEGRTKAPGTQPSPGLRITIKRAGVEPIIPGVSKVM FT FPDASEVGSKKHLSSASRGPEKGPRLRDAFEKGPSELRIQEQGPPARPGKKQPSWVPQE FT GSQELQAGQDQSELGLLPSWVPEVPEGLQQLGSGKEIKGQQGRQRNRGIGEDQPPESCQ FT AGHGGSRLLIPALLEAEGGRSPEVKTSLANMVKPCLY" FT CDS complement(join(16725260..16725317,16725839..16726016, FT 16727215..16727387,16730222..16730339,16730463..16730534, FT 16731462..16731599,16735613..16735698,16736096..16736538, FT 16748004..16748052,16748406..16748466,16757833..16757866)) FT /gene="SPATA21" FT /locus_tag="RP11-430L17.3-001" FT /standard_name="OTTHUMP00000002439" FT /product="spermatogenesis associated 21" FT /protein_id="CAH73778.1" FT /translation="MDNRNTQMYTEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPL FT PPPEVRDIGERREPDRAQQQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASK FT ARSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMP FT CPVLLGPALDLGWRRMELLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEEQLTLKQ FT EEAFRSYFEIFNGPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDFL FT AVMTDTRRFFCSVEQNALSDMAPHNPHTLLFEILSLLVEMLALPEAVLEEITNYYQKKL FT KEGTCKAQEMEAAVGRLRLQKLPYNPQQEESSEVPERKVLSILSRLKQQNYAPNLQSPY FT AQVPCILLCPQLDKKMVRRQPSNHYALDQCTPPGLDPDIRSPFFQSGSQGNREHNSDSR FT KWLSSVPARTH" FT mRNA complement(join(16722176..16722807,16723053..16723241, FT 16725839..16726016,16726977..16727130,16727215..16727387, FT 16730222..16730339,16730463..16730534,16731462..16731599, FT 16734993..16735200,16735613..16735698,16736096..16736538, FT 16737273..16737410,16748406..16748689,16752019..16752226, FT 16754359..16754510,16757738..16757917,16763623..16763888)) FT /gene="SPATA21" FT /locus_tag="RP11-430L17.3-003" FT /product="spermatogenesis associated 21" FT /note="match: cDNAs: Em:AK128106.1" FT mRNA complement(join(16725138..16725317,16725839..16726016, FT 16727215..16727387,16730222..16730339,16730463..16730534, FT 16731462..16731599,16735613..16735698,16736096..16736538, FT 16748004..16748052,16748406..16748466,16757833..16757917, FT 16759285..16759419,16763623..16763919)) FT /gene="SPATA21" FT /locus_tag="RP11-430L17.3-001" FT /product="spermatogenesis associated 21" FT /note="match: cDNAs: Em:AB071053.1 Em:AY327405.1" FT mRNA complement(join(16751399..16751705,16752019..16752226, FT 16754359..16754510,16757738..16757917,16763623..16763911)) FT /gene="SPATA21" FT /locus_tag="RP11-430L17.3-002" FT /product="spermatogenesis associated 21" FT /note="match: cDNAs: Em:BC022039.1" FT misc_feature 16766134..16773050 FT /note="annotated region of clone" FT mRNA join(16767231..16767348,16767661..16768114) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-004" FT /product="NECAP endocytosis associated 2" FT /note="match: ESTs: Em:AW006763.1 Em:AW006996.1 FT Em:AW161023.1 Em:BQ000959.1" FT mRNA join(16767233..16767348,16770127..16770227, FT AL137802.7:3315..3419,AL137802.7:3505..3586, FT AL137802.7:4538..4646,AL137802.7:7283..7460, FT AL137802.7:11263..11338,AL137802.7:14287..15523) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-001" FT /product="NECAP endocytosis associated 2" FT /note="match: cDNAs: Em:BC018914.1" FT mRNA join(16767238..16767348,16770127..16770227, FT AL137802.7:3315..3419,AL137802.7:3505..3586, FT AL137802.7:4538..4646,AL137802.7:7283..7460, FT AL137802.7:11263..11338,AL137802.7:14287..14507, FT AL137802.7:14719..15522) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-002" FT /product="NECAP endocytosis associated 2" FT /note="match: cDNAs: Em:AK001282.1" FT mRNA join(16767251..16767348,16770127..16770227, FT AL137802.7:3315..3419,AL137802.7:3505..3586, FT AL137802.7:4538..4646,AL137802.7:5570..5686, FT AL137802.7:7283..7460,AL137802.7:11263..11338, FT AL137802.7:14287..14401) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-005" FT /product="NECAP endocytosis associated 2" FT /note="match: ESTs: Em:BX377358.1" FT mRNA join(16767253..16767348,16770127..16770227, FT AL137802.7:3315..3419,AL137802.7:3505..3586, FT AL137802.7:4538..7460,AL137802.7:11263..11338, FT AL137802.7:14287..15522) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-003" FT /product="NECAP endocytosis associated 2" FT /note="match: cDNAs: Em:AK024468.1" FT CDS join(16767257..16767348,16770127..16770227, FT AL137802.7:3315..3419,AL137802.7:3505..3586, FT AL137802.7:4538..4646,AL137802.7:7283..7460, FT AL137802.7:11263..11338,AL137802.7:14287..14335) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-001" FT /standard_name="OTTHUMP00000002441" FT /product="NECAP endocytosis associated 2" FT /note="match: proteins: Sw:Q9D1J1 Sw:Q9NVZ3" FT /protein_id="CAH71454.1" FT /translation="MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGR FT LRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAF FT IGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIA FT NMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSS FT GGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF" FT misc_feature 16769250 FT /note="Clone_left_end: RP4-798A10" FT misc_feature 16773051..16859226 FT /note="annotated region of clone" FT mRNA join(AL669962.4:2901..3016,AL669962.4:5795..5895, FT 16774365..16774469,16774555..16774636,16775588..16775696, FT 16778333..16778510,16782313..16782388,16785337..16786573) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-001" FT /product="NECAP endocytosis associated 2" FT /note="match: cDNAs: Em:BC018914.1" FT mRNA join(AL669962.4:2906..3016,AL669962.4:5795..5895, FT 16774365..16774469,16774555..16774636,16775588..16775696, FT 16778333..16778510,16782313..16782388,16785337..16785557, FT 16785769..16786572) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-002" FT /product="NECAP endocytosis associated 2" FT /note="match: cDNAs: Em:AK001282.1" FT mRNA join(AL669962.4:2919..3016,AL669962.4:5795..5895, FT 16774365..16774469,16774555..16774636,16775588..16775696, FT 16776620..16776736,16778333..16778510,16782313..16782388, FT 16785337..16785451) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-005" FT /product="NECAP endocytosis associated 2" FT /note="match: ESTs: Em:BX377358.1" FT mRNA join(AL669962.4:2921..3016,AL669962.4:5795..5895, FT 16774365..16774469,16774555..16774636,16775588..16778510, FT 16782313..16782388,16785337..16786572) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-003" FT /product="NECAP endocytosis associated 2" FT /note="match: cDNAs: Em:AK024468.1" FT CDS join(AL669962.4:2925..3016,AL669962.4:5795..5895, FT 16774365..16774469,16774555..16774636,16775588..16775696, FT 16778333..16778510,16782313..16782388,16785337..16785385) FT /gene="NECAP2" FT /locus_tag="RP4-798A10.1-001" FT /standard_name="OTTHUMP00000002441" FT /product="NECAP endocytosis associated 2" FT /note="match: proteins: Sw:Q9D1J1 Sw:Q9NVZ3" FT /protein_id="CAI22843.1" FT /translation="MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGR FT LRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAF FT IGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIA FT NMKKKEGAAGNPRVRPASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSS FT GGAPVPWPQPNPATADIWGDFTKSTGSTSSQTQPGTGWVQF" FT mRNA complement(join(16859035..16859226,AL355149.13:2001..2062, FT AL355149.13:3396..3485,AL355149.13:3931..4279)) FT /locus_tag="RP5-875O13.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:CA777704.1" FT polyA_signal 16786551..16786556 FT polyA_site 16786573 FT mRNA join(16787443..16789782,16794072..16794976) FT /locus_tag="RP4-798A10.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK097742.1" FT CDS complement(join(16802411..16802550,16802894..16802999, FT 16803425..16803573,16804755..16804932,16809781..16809981, FT 16810728..16810959,16811318..16811401,16812064..16812159, FT 16812921..16813156,16816179..16816287,16817113..16817278, FT 16817359..16817421,16817505..16817589,16817701..16817802)) FT /pseudo FT /locus_tag="RP4-798A10.6-001" FT /product="ciliary rootlet coiled-coil, rootletin (CROCC) FT pseudogene" FT /note="match: proteins: Sw:Q5TZA2 Sw:Q8CJ40 Sw:Q8CJ40" FT mRNA join(16847189..16847282,16848056..16848303) FT /locus_tag="RP4-798A10.4-001" FT /product="novel trancript" FT /note="match: ESTs: Em:AI150820.1 Em:BF446933.1 FT Em:BX115769.1" FT misc_feature 16857226 FT /note="Clone_right_end: RP4-798A10" FT misc_feature 16859227..16894615 FT /note="annotated region of clone" FT mRNA complement(join(16860381..16860704,16860921..16862144)) FT /locus_tag="RP5-875O13.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC036435.1" FT mRNA complement(join(AL137802.7:87985..88176,16859227..16859288, FT 16860622..16860711,16861157..16861505)) FT /locus_tag="RP5-875O13.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:CA777704.1" FT CDS complement(join(16875146..16875381,16877196..16877724, FT 16878910..16879026)) FT /pseudo FT /locus_tag="RP5-875O13.6-001" FT /product="phosphodiesterase 4D interacting protein FT (myomegalin) (PDE4DIP) pseudogene" FT /note="match: proteins: Tr:O75042 Tr:Q86T40 Tr:Q9WUJ3" FT misc_feature 16890616 FT /note="Clone_left_end: RP5-1182A14" FT mRNA join(AL137798.8:98674..98924,AL137798.8:103483..103754, FT AL137798.8:107330..107471,AL137798.8:119949..120103, FT AL137798.8:126564..126773,AL137798.8:129504..129718, FT AL137798.8:130770..130842,AL137798.8:131306..131517, FT AL137798.8:132860..133069,AL137798.8:134843..134945, FT AL137798.8:135781..135995,AL137798.8:137033..137105, FT AL137798.8:137570..137775,AL137798.8:139069..139120, FT AL137798.8:143026..143189,complement(16894474..16894601), FT complement(16893674..16893846), FT complement(16892903..16892954), FT complement(16892131..16892300)) FT /locus_tag="RP5-1182A14.1-005" FT /product="novel transcript" FT /note="match: cDNAs: Em:BX648497.1" FT mRNA join(AL137798.8:107330..107471,AL137798.8:107898..108021, FT AL137798.8:119949..120103,AL137798.8:120206..120415, FT AL137798.8:123199..123413,AL137798.8:124465..124537, FT AL137798.8:125001..125212,AL137798.8:126564..126773, FT AL137798.8:128566..128668,AL137798.8:129504..129718, FT AL137798.8:130770..130842,AL137798.8:137570..137775, FT AL137798.8:139069..139120,AL137798.8:143026..143186, FT complement(16894474..16894528), FT complement(16893674..16893846), FT complement(16892903..16892954), FT complement(16888818..16890681)) FT /locus_tag="RP5-1182A14.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AF419616.1 Em:AF419617.1" FT misc_feature complement(16894616..17007591) FT /note="annotated region of clone" FT mRNA complement(join(17007487..17007591,AL021920.1:1..131, FT AL021920.1:616..1148,AL021920.1:5543..5662, FT AL021920.1:6235..6426,AL021920.1:7280..7688)) FT /locus_tag="RP1-163M9.6-001" FT /product="phosphodiesterase 4D interacting protein FT (myomegalin) (PDE4DIP) pseudogene" FT polyA_site 16979051 FT polyA_signal 16979033..16979038 FT CDS join(16972122..16972173,16972893..16973010, FT 16973092..16973204,16973282..16973396,16973475..16973611, FT 16973693..16973813,16973958..16974076,16974279..16974447, FT 16974563..16974693,16974794..16974896,16975024..16975159, FT 16975251..16975287,16975376..16975496,16975669..16975746, FT 16975874..16976020,16976102..16976208,16976305..16976444, FT 16976569..16976730) FT /pseudo FT /locus_tag="RP5-1182A14.3-001" FT /product="macrophage stimulating 1 (hepatocyte growth FT factor-like)(MST1) pseudogene" FT /note="match: proteins: Sw:P26927 Sw:P26928 Tr:P70521 FT Tr:Q6GTL1 Tr:Q91XG8" FT mRNA complement(join(16956165..16957604,16958025..16958108, FT 16958770..16958866,16959590..16959841,16969523..16969640, FT 16971141..16971178)) FT /locus_tag="RP5-1182A14.4-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK123337.1" FT mRNA complement(join(16947340..16951373,16951874..16952500, FT 16952848..16952994,16953640..16953784,16954963..16955145, FT 16957385..16957604,16958025..16958108,16958770..16958866, FT 16959590..16959841,16969523..16969640,16971141..16971167)) FT /locus_tag="RP5-1182A14.4-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK090414.1" FT misc_feature complement(16969637) FT /note="Clone_left_end: RP11-284O17" FT mRNA complement(join(16944757..16946519,16952270..16952500, FT 16952848..16952994,16953640..16953784,16954963..16955145, FT 16957385..16957604,16959784..16959841,16961039..16961054)) FT /locus_tag="RP5-1182A14.4-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC056144.1" FT mRNA complement(join(AL355149.13:34905..35074, FT AL355149.13:35677..35728,AL355149.13:36448..36620, FT AL355149.13:37248..37375,16895568..16895731, FT 16899637..16899688,16900982..16901187,16901652..16901724, FT 16902762..16902976,16903812..16903914,16905688..16905897, FT 16907240..16907451,16907915..16907987,16909039..16909253, FT 16911984..16912193,16918654..16918808,16931286..16931427, FT 16935003..16935274,16939833..16940083)) FT /locus_tag="RP5-1182A14.1-005" FT /product="novel transcript" FT /note="match: cDNAs: Em:BX648497.1" FT mRNA complement(join(16931913..16934186,16935003..16935274, FT 16939833..16940029)) FT /locus_tag="RP5-1182A14.1-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK055895.1 Em:AK123260.1 FT Em:BC010124.1 Em:BC010124.2" FT mRNA complement(join(16920057..16920248,16921087..16921156, FT 16921426..16921508,16935003..16935145)) FT /locus_tag="RP5-1182A14.1-004" FT /product="novel transcript" FT /note="match: ESTs: Em:BX646450.1" FT mRNA complement(join(AL355149.13:31592..33455, FT AL355149.13:35677..35728,AL355149.13:36448..36620, FT AL355149.13:37248..37302,16895571..16895731, FT 16899637..16899688,16900982..16901187,16907915..16907987, FT 16909039..16909253,16910089..16910191,16911984..16912193, FT 16913545..16913756,16914220..16914292,16915344..16915558, FT 16918342..16918551,16918654..16918808,16930736..16930859, FT 16931286..16931427)) FT /locus_tag="RP5-1182A14.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AF419616.1 Em:AF419617.1" FT misc_feature 17007592..17125658 FT /note="annotated region of clone" FT CDS complement(17012116..17012550) FT /pseudo FT /locus_tag="RP1-163M9.3-001" FT /product="eukaryotic translation initiation factor 1A FT pseudogene 1" FT /note="match: proteins: Sw:O14602 Sw:O75642 Sw:P47813 FT Sw:Q60872 Sw:Q8BMJ3 Tr:O14602 Tr:P47813" FT /db_xref="PSEUDO:CAA17281.1" FT mRNA join(complement(17014871..17015279), FT complement(17013826..17014017), FT complement(17013134..17013253), FT complement(17008207..17008739), FT complement(17007592..17007722),AL137798.8:31166..31270) FT /locus_tag="RP1-163M9.6-001" FT /product="phosphodiesterase 4D interacting protein FT (myomegalin) (PDE4DIP) pseudogene" FT mRNA complement(join(17013834..17014017,17017608..17017789, FT 17018600..17018804)) FT /locus_tag="RP1-163M9.6-002" FT /product="phosphodiesterase 4D interacting protein FT (myomegalin) (PDE4DIP) pseudogene" FT /note="match: ESTs: Em:EG327594.1" FT CDS complement(join(17017713..17017789,17022926..17023189, FT 17023274..17023419,17025921..17026116,17026354..17026515, FT 17029196..17029467,17030438..17030639,17033783..17033914, FT 17034040..17034222,17034387..17034573,17046459..17046652)) FT /pseudo FT /gene="ESPNP" FT /locus_tag="RP1-163M9.1-001" FT /product="espin pseudogene" FT /note="match: proteins: Tr:O95559" FT CDS join(17076728..17076916,17077009..17077089, FT 17077168..17077227,17077292..17077459) FT /pseudo FT /locus_tag="RP1-163M9.5-001" FT /product="ciliary rootlet coiled-coil, rootletin (CROCC) FT pseudogene" FT /note="match: proteins: Sw:Q5TZA2 Sw:Q8CJ40" FT CDS complement(join(17083673..17083888,17084013..17084152, FT 17084249..17084355,17084437..17084583,17084711..17084788, FT 17084961..17085081,17085170..17085206,17085298..17085431, FT 17085561..17085663,17085764..17085894,17086014..17086181, FT 17086384..17086502,17086647..17086767,17086849..17086985, FT 17087064..17087178,17087256..17087368,17087450..17087597, FT 17088299..17088348)) FT /pseudo FT /locus_tag="RP1-163M9.4-001" FT /product="macrophage stimulating 1 (hepatocyte growth FT factor-like)(MST1) pseudogene" FT /note="match: proteins: Sw:P26927 Sw:P26928 Tr:P70521 FT Tr:Q13208 Tr:Q6GTL1 Tr:Q6GTN4 Tr:Q91XG8" FT gap 17125659..17175658 FT /estimated_length=50000 FT misc_feature 17175659..17267484 FT /note="annotated region of clone" FT misc_feature 17175659 FT /note="Clone_left_end: RP11-108M9" FT mRNA complement(join(17177698..17177972,17178570..17178864, FT 17179257..17179294)) FT /locus_tag="RP11-108M9.1-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW966406.1" FT mRNA complement(join(17177816..17177972,17178069..17178218, FT 17178570..17178864,17179492..17179624)) FT /locus_tag="RP11-108M9.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA716462.1 Em:AV689767.1" FT mRNA join(17181902..17182018,17183207..17183735, FT 17185544..17185779) FT /locus_tag="RP11-108M9.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL691912.1" FT /note="match: cDNAs: Em:AB007923.2 Em:AL833273.1 FT Em:BX647660.1" FT mRNA join(17197440..17199602,17200218..17200574) FT /locus_tag="RP11-108M9.3-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:AK125737.1" FT mRNA join(17198753..17198837,17200188..17200536) FT /locus_tag="RP11-108M9.3-003" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BX103422.1" FT mRNA join(17198779..17200002,17200218..17200539) FT /locus_tag="RP11-108M9.3-002" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:BC036435.1" FT mRNA join(17199534..17199638,17200218..17200587) FT /locus_tag="RP11-108M9.3-004" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA626381.1 Em:AI138769.1" FT polyA_site 17200539 FT polyA_site complement(17215033) FT polyA_site complement(17215037) FT polyA_signal complement(17215059..17215064) FT polyA_signal complement(17215063..17215068) FT CDS 17215590..17216097 FT /pseudo FT /locus_tag="RP11-108M9.5-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q8N8A9" FT mRNA complement(join(17215033..17215280,17215711..17215868)) FT /locus_tag="RP11-108M9.4-003" FT /product="putative novel transcript" FT /note="match: ESTs: Em:N94999.1" FT mRNA complement(join(17215037..17215277,17216043..17216137)) FT /locus_tag="RP11-108M9.4-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BX115769.1" FT mRNA complement(join(17215037..17215280,17216043..17216144)) FT /locus_tag="RP11-108M9.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA397736.1 Em:AW958045.1" FT mRNA join(17222232..17222356,17256781..17256842, FT 17256924..17257089,17263132..17263368,17264136..17264232, FT 17264895..17264978,17265404..17265637,17266389..17266588, FT 17267267..17267484,complement(AL049569.13:216053..216497)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-003" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:AK026910.1" FT misc_feature 17240428..17240630 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(17248445..17248573,17249158..17249293, FT 17250820..17250974,17256341..17256526,17256619..17256702, FT 17256781..17256842,17256924..17257089,17257786..17257892, FT 17263132..17263368,17264136..17264232,17264895..17264978, FT 17265404..17265637,17266389..17266588, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:208963..209156), FT complement(AL049569.13:208561..208688), FT complement(AL049569.13:206365..206534), FT complement(AL049569.13:204006..204185), FT complement(AL049569.13:203130..203264), FT complement(AL049569.13:202610..202753), FT complement(AL049569.13:201937..202175), FT complement(AL049569.13:201331..201490), FT complement(AL049569.13:198737..198904), FT complement(AL049569.13:196357..196729), FT complement(AL049569.13:191595..191764), FT complement(AL049569.13:191368..191488), FT complement(AL049569.13:190916..191079), FT complement(AL049569.13:189069..189284), FT complement(AL049569.13:188147..188371), FT complement(AL049569.13:187553..187702), FT complement(AL049569.13:187034..187234), FT complement(AL049569.13:186720..186851), FT complement(AL049569.13:185840..186022), FT complement(AL049569.13:184523..185127)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-001" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:AB007914.2" FT /note="match: ESTs: Em:BU171421.1" FT CDS join(17248514..17248573,17249158..17249293, FT 17250820..17250974,17256341..17256526,17256619..17256702, FT 17256781..17256842,17256924..17257089,17257786..17257892, FT 17263132..17263368,17264136..17264232,17264895..17264978, FT 17265404..17265637,17266389..17266588, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:208963..209156), FT complement(AL049569.13:208561..208688), FT complement(AL049569.13:206365..206534), FT complement(AL049569.13:204006..204185), FT complement(AL049569.13:203130..203264), FT complement(AL049569.13:202610..202753), FT complement(AL049569.13:201937..202175), FT complement(AL049569.13:201331..201490), FT complement(AL049569.13:198737..198904), FT complement(AL049569.13:196357..196729), FT complement(AL049569.13:191595..191764), FT complement(AL049569.13:191368..191488), FT complement(AL049569.13:190916..191079), FT complement(AL049569.13:189069..189284), FT complement(AL049569.13:188147..188371), FT complement(AL049569.13:187553..187702), FT complement(AL049569.13:187034..187234), FT complement(AL049569.13:186720..186851), FT complement(AL049569.13:185840..186022), FT complement(AL049569.13:185041..185127)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-001" FT /standard_name="OTTHUMP00000002222" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: proteins: Sw:Q5TZA2 Sw:Q8CJ40 Sw:Q8CJ40" FT /protein_id="CAH70055.1" FT /translation="MSLGLARAQEVELTLETVIQTLESSVLCQEKGLGARDLAQDAQIT FT SLPALIREIVTRNLSQPESPVLLPATEMASLLSLQEENQLLQQELSRVEDLLAQSRAER FT DELAIKYNAVSERLEQALRLEPGELETQEPRGLVRQSVELRRQLQEEQASYRRKLQAYQ FT EGQQRQAQLVQRLQGKILQYKKRCSELEQQLLERSGELEQQRLRDTEHSQDLESALIRL FT EEEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRRE FT EESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFTERDLLQLGGELARTSRAVQEAGL FT GLSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARV FT TELGLAVKRLEKQNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQ FT AVLSDSESGVQLSGSERTADASNGSLRGLSGQRTPSPPRRSSPGRGRSPRRGPSPACSD FT SSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDK FT TDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEE FT LRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATL FT QRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKL FT DLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAE FT QAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREK FT EALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQL FT EAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRA FT AHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQE FT RDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDR FT STVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLL FT EDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSA FT VKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQE FT LRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQ FT ELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELG FT LRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLGRAPSPAPRPVPGSP FT ARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRS FT AQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQA FT ELALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKR FT RLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSE FT VKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKAL FT TACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQL FT REVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKD FT RVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVV FT LEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVRGLEEQVST FT LKGQLQQELRRSSAPFSPPSGPPEK" FT mRNA join(<17249185..17249293,17250820..17250974, FT 17256781..17256842,17256924..17257089,17257786..17257892, FT 17263132..17263368,17264136..17264232,17264895..17264978, FT 17265404..17265637,17266389..17266588, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:208963..209156), FT complement(AL049569.13:208561..208688), FT complement(AL049569.13:206365..206534), FT complement(AL049569.13:204006..204185), FT complement(AL049569.13:203130..203264), FT complement(AL049569.13:202610..202753), FT complement(AL049569.13:201937..202175), FT complement(AL049569.13:201331..201490), FT complement(AL049569.13:198737..198904), FT complement(AL049569.13:196357..196729), FT complement(AL049569.13:191595..191764), FT complement(AL049569.13:191368..191488), FT complement(AL049569.13:190916..191079), FT complement(AL049569.13:189069..189284), FT complement(AL049569.13:188147..188371), FT complement(AL049569.13:187553..187702), FT complement(AL049569.13:187034..187234), FT complement(AL049569.13:186720..186851), FT complement(AL049569.13:185840..186022), FT complement(AL049569.13:184642..185127)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-002" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC054054.1" FT CDS join(<17249185..17249293,17250820..17250974, FT 17256781..17256842,17256924..17257089,17257786..17257892, FT 17263132..17263368,17264136..17264232,17264895..17264978, FT 17265404..17265637,17266389..17266588, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:208963..209156), FT complement(AL049569.13:208561..208688), FT complement(AL049569.13:206365..206534), FT complement(AL049569.13:204006..204185), FT complement(AL049569.13:203130..203264), FT complement(AL049569.13:202610..202753), FT complement(AL049569.13:201937..202175), FT complement(AL049569.13:201331..201490), FT complement(AL049569.13:198737..198904), FT complement(AL049569.13:196357..196729), FT complement(AL049569.13:191595..191764), FT complement(AL049569.13:191368..191488), FT complement(AL049569.13:190916..191079), FT complement(AL049569.13:189069..189284), FT complement(AL049569.13:188147..188371), FT complement(AL049569.13:187553..187702), FT complement(AL049569.13:187034..187234), FT complement(AL049569.13:186720..186851), FT complement(AL049569.13:185840..186022), FT complement(AL049569.13:185041..185127)) FT /codon_start=1 FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-002" FT /standard_name="OTTHUMP00000002223" FT /product="ciliary rootlet coiled-coil, rootletin" FT /protein_id="CAH70057.1" FT /translation="EKGLGARDLAQDAQITSLPALIREIVTRNLSQPESPVLLPATEMA FT SLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERDTEHSQDLESALIRLE FT EEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRREE FT ESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFTERDLLQLGGELARTSRAVQEAGLG FT LSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARVT FT ELGLAVKRLEKQNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQA FT VLSDSESGVQLSGSERTADASNGSLRGLSGQRTPSPPRRSSPGRGRSPRRGPSPACSDS FT STLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKT FT DGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEEL FT RRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQ FT RDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLD FT LNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQ FT AQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKE FT ALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLE FT AEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAA FT HEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQER FT DEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRS FT TVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLE FT DARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAV FT KKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQEL FT RRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQE FT LQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGL FT RLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLGRAPSPAPRPVPGSPA FT RDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRSA FT QRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAE FT LALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRR FT LKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEV FT KAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALT FT ACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLR FT EVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDR FT VALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVL FT EQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVRGLEEQVSTL FT KGQLQQELRRSSAPFSPPSGPPEK" FT mRNA join(17249262..17249293,17256341..17256526, FT 17256619..17256702,17256781..17256842,17256924..17257089, FT 17257786..17257892,17263132..17263368,17264136..17264232, FT 17264895..17264978,17265404..17265637,17266389..17266588, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:204006..204185), FT complement(AL049569.13:203125..203264)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-004" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:AL834169.1" FT mRNA join(17256630..17256702,17256781..17256842, FT 17256924..17257089,17257786..17257892,17264136..17264232, FT 17265404..17265637,17266389..17266588, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211187)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-005" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC033082.1" FT mRNA join(17263173..17263414,17264136..17264232, FT 17264895..17264978,17265428..17265637, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210083..210726), FT complement(AL049569.13:207243..209554), FT complement(AL049569.13:205602..206947)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-007" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:AK090414.1" FT mRNA join(17263286..17263368,17264136..17264232, FT 17265404..17265637,17266389..17266588) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-009" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BM460873.1" FT mRNA join(17264136..17264232,17264895..17264978, FT 17265428..17265637,complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:204006..204185), FT complement(AL049569.13:203130..203264)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-010" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BG742147.1 Em:BX362630.1" FT mRNA join(17265404..17265637, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:203125..204185), FT complement(AL049569.13:202706..202753)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-006" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC056144.1" FT /note="match: ESTs: Em:BE393305.1" FT mRNA join(17265588..17265637, FT complement(AL049569.13:213205..213387), FT complement(AL049569.13:211881..212025), FT complement(AL049569.13:211082..211228), FT complement(AL049569.13:210496..210726), FT complement(AL049569.13:204006..204407), FT complement(AL049569.13:203125..203264)) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-008" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC006312.1" FT misc_feature complement(17267485..17483981) FT /note="annotated region of clone" FT mRNA complement(join(17405526..17405910,17409040..17409147, FT 17410221..17410332,17411094..17411197,17413016..17413194, FT 17418903..17419028,17420062..17420179,17422404..17422465, FT 17429482..17429554,17431373..17431556,17445775..17445930)) FT /gene="PADI2" FT /locus_tag="RP1-37C10.6-004" FT /product="peptidyl arginine deiminase, type II" FT mRNA complement(join(17393256..17395772,17396583..17396711, FT 17397901..17397986,17401351..17401444,17402174..17402318, FT 17405759..17405910,17409040..17409147,17410221..17410332, FT 17411094..17411197,17413016..17413194,17418903..17419028, FT 17420062..17420179,17422404..17422465,17429482..17429554, FT 17431373..17431556,17445775..17445930)) FT /gene="PADI2" FT /locus_tag="RP1-37C10.6-001" FT /product="peptidyl arginine deiminase, type II" FT /note="match: cDNAs: Em:AB023211.1 Em:AB030176.1" FT CDS complement(join(17405755..17405910,17409040..17409147, FT 17410221..17410332,17411094..17411197,17413016..17413194, FT 17418903..17419028,17420062..17420179,17422404..17422465, FT 17429482..17429554,17431373..17431556,17445775..17445866)) FT /gene="PADI2" FT /locus_tag="RP1-37C10.6-004" FT /standard_name="OTTHUMP00000002404" FT /product="peptidyl arginine deiminase, type II" FT /protein_id="CAI20362.1" FT /translation="MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHS FT EHVWVEVVRDGEAEEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSI FT PIDQAGLFLTAIEISLDVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLP FT KEDCRDEKVYSKEDLKDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFF FT GQRYIHILGRRKLYHVVKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIP FT LTPIFTDTVIFRIAPWIMTPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQ FT YLNRGDRWIQDEIEFGYIEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLF FT ESVTSLDSFGNLEVSPPVTVNGKTYPLGRILIGSSFPL" FT CDS complement(join(17395539..17395772,17396583..17396711, FT 17397901..17397986,17401351..17401444,17402174..17402318, FT 17405759..17405910,17409040..17409147,17410221..17410332, FT 17411094..17411197,17413016..17413194,17418903..17419028, FT 17420062..17420179,17422404..17422465,17429482..17429554, FT 17431373..17431556,17445775..17445866)) FT /gene="PADI2" FT /locus_tag="RP1-37C10.6-001" FT /standard_name="OTTHUMP00000002403" FT /product="peptidyl arginine deiminase, type II" FT /note="match: proteins: Sw:P20717 Sw:Q08642 Sw:Q9Y2J8 FT Tr:Q96DA7" FT /protein_id="CAB96821.1" FT /translation="MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHS FT EHVWVEVVRDGEAEEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSI FT PIDQAGLFLTAIEISLDVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLP FT KEDCRDEKVYSKEDLKDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFF FT GQRYIHILGRRKLYHVVKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIP FT LTPIFTDTVIFRIAPWIMTPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQ FT YLNRGDRWIQDEIEFGYIEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLF FT ESVTSLDSFGNLEVSPPVTVNGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQA FT PVELYSDWLTVGHVDEFMSFVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKG FT LGGMSSKRITINKILSNESLVQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMD FT EDHRARAFFPNMVNMIVLDKDLGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDI FT SAYHKFLGEVHCGTNVRRKPFTFKWWHMVP" FT mRNA join(BX284668.4:46574..46698,BX284668.4:81123..81184, FT BX284668.4:81266..81431,BX284668.4:87474..87710, FT BX284668.4:88478..88574,BX284668.4:89237..89320, FT BX284668.4:89746..89979,BX284668.4:90731..90930, FT BX284668.4:91609..91826,17267485..17267929) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-003" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:AK026910.1" FT mRNA join(BX284668.4:72787..72915,BX284668.4:73500..73635, FT BX284668.4:75162..75316,BX284668.4:80683..80868, FT BX284668.4:80961..81044,BX284668.4:81123..81184, FT BX284668.4:81266..81431,BX284668.4:82128..82234, FT BX284668.4:87474..87710,BX284668.4:88478..88574, FT BX284668.4:89237..89320,BX284668.4:89746..89979, FT BX284668.4:90731..90930,17270595..17270777, FT 17271957..17272101,17272754..17272900,17273256..17273486, FT 17274826..17275019,17275294..17275421,17277448..17277617, FT 17279797..17279976,17280718..17280852,17281229..17281372, FT 17281807..17282045,17282492..17282651,17285078..17285245, FT 17287253..17287625,17292218..17292387,17292494..17292614, FT 17292903..17293066,17294698..17294913,17295611..17295835, FT 17296280..17296429,17296748..17296948,17297131..17297262, FT 17297960..17298142,17298855..17299459) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-001" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:AB007914.2" FT /note="match: ESTs: Em:BU171421.1" FT CDS join(BX284668.4:72856..72915,BX284668.4:73500..73635, FT BX284668.4:75162..75316,BX284668.4:80683..80868, FT BX284668.4:80961..81044,BX284668.4:81123..81184, FT BX284668.4:81266..81431,BX284668.4:82128..82234, FT BX284668.4:87474..87710,BX284668.4:88478..88574, FT BX284668.4:89237..89320,BX284668.4:89746..89979, FT BX284668.4:90731..90930,17270595..17270777, FT 17271957..17272101,17272754..17272900,17273256..17273486, FT 17274826..17275019,17275294..17275421,17277448..17277617, FT 17279797..17279976,17280718..17280852,17281229..17281372, FT 17281807..17282045,17282492..17282651,17285078..17285245, FT 17287253..17287625,17292218..17292387,17292494..17292614, FT 17292903..17293066,17294698..17294913,17295611..17295835, FT 17296280..17296429,17296748..17296948,17297131..17297262, FT 17297960..17298142,17298855..17298941) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-001" FT /standard_name="OTTHUMP00000002222" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: proteins: Sw:Q5TZA2 Sw:Q8CJ40 Sw:Q8CJ40" FT /protein_id="CAI20363.1" FT /translation="MSLGLARAQEVELTLETVIQTLESSVLCQEKGLGARDLAQDAQIT FT SLPALIREIVTRNLSQPESPVLLPATEMASLLSLQEENQLLQQELSRVEDLLAQSRAER FT DELAIKYNAVSERLEQALRLEPGELETQEPRGLVRQSVELRRQLQEEQASYRRKLQAYQ FT EGQQRQAQLVQRLQGKILQYKKRCSELEQQLLERSGELEQQRLRDTEHSQDLESALIRL FT EEEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRRE FT EESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFTERDLLQLGGELARTSRAVQEAGL FT GLSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARV FT TELGLAVKRLEKQNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQ FT AVLSDSESGVQLSGSERTADASNGSLRGLSGQRTPSPPRRSSPGRGRSPRRGPSPACSD FT SSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDK FT TDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEE FT LRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATL FT QRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKL FT DLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAE FT QAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREK FT EALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQL FT EAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRA FT AHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQE FT RDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDR FT STVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLL FT EDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSA FT VKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQE FT LRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQ FT ELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELG FT LRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLGRAPSPAPRPVPGSP FT ARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRS FT AQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQA FT ELALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKR FT RLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSE FT VKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKAL FT TACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQL FT REVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKD FT RVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVV FT LEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVRGLEEQVST FT LKGQLQQELRRSSAPFSPPSGPPEK" FT mRNA join(BX284668.4:<73527..73635,BX284668.4:75162..75316, FT BX284668.4:81123..81184,BX284668.4:81266..81431, FT BX284668.4:82128..82234,BX284668.4:87474..87710, FT BX284668.4:88478..88574,BX284668.4:89237..89320, FT BX284668.4:89746..89979,BX284668.4:90731..90930, FT 17270595..17270777,17271957..17272101,17272754..17272900, FT 17273256..17273486,17274826..17275019,17275294..17275421, FT 17277448..17277617,17279797..17279976,17280718..17280852, FT 17281229..17281372,17281807..17282045,17282492..17282651, FT 17285078..17285245,17287253..17287625,17292218..17292387, FT 17292494..17292614,17292903..17293066,17294698..17294913, FT 17295611..17295835,17296280..17296429,17296748..17296948, FT 17297131..17297262,17297960..17298142,17298855..17299340) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-002" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC054054.1" FT CDS join(BX284668.4:<73527..73635,BX284668.4:75162..75316, FT BX284668.4:81123..81184,BX284668.4:81266..81431, FT BX284668.4:82128..82234,BX284668.4:87474..87710, FT BX284668.4:88478..88574,BX284668.4:89237..89320, FT BX284668.4:89746..89979,BX284668.4:90731..90930, FT 17270595..17270777,17271957..17272101,17272754..17272900, FT 17273256..17273486,17274826..17275019,17275294..17275421, FT 17277448..17277617,17279797..17279976,17280718..17280852, FT 17281229..17281372,17281807..17282045,17282492..17282651, FT 17285078..17285245,17287253..17287625,17292218..17292387, FT 17292494..17292614,17292903..17293066,17294698..17294913, FT 17295611..17295835,17296280..17296429,17296748..17296948, FT 17297131..17297262,17297960..17298142,17298855..17298941) FT /codon_start=1 FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-002" FT /standard_name="OTTHUMP00000002223" FT /product="ciliary rootlet coiled-coil, rootletin" FT /protein_id="CAI20365.1" FT /translation="EKGLGARDLAQDAQITSLPALIREIVTRNLSQPESPVLLPATEMA FT SLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERDTEHSQDLESALIRLE FT EEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRREE FT ESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFTERDLLQLGGELARTSRAVQEAGLG FT LSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARVT FT ELGLAVKRLEKQNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQA FT VLSDSESGVQLSGSERTADASNGSLRGLSGQRTPSPPRRSSPGRGRSPRRGPSPACSDS FT STLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKT FT DGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEEL FT RRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQ FT RDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLD FT LNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQ FT AQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKE FT ALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLE FT AEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAA FT HEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQER FT DEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRS FT TVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLE FT DARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAV FT KKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQEL FT RRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQE FT LQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGL FT RLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLGRAPSPAPRPVPGSPA FT RDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRSA FT QRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAE FT LALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRR FT LKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEV FT KAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALT FT ACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLR FT EVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDR FT VALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVL FT EQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVRGLEEQVSTL FT KGQLQQELRRSSAPFSPPSGPPEK" FT mRNA join(BX284668.4:73604..73635,BX284668.4:80683..80868, FT BX284668.4:80961..81044,BX284668.4:81123..81184, FT BX284668.4:81266..81431,BX284668.4:82128..82234, FT BX284668.4:87474..87710,BX284668.4:88478..88574, FT BX284668.4:89237..89320,BX284668.4:89746..89979, FT BX284668.4:90731..90930,17270595..17270777, FT 17271957..17272101,17272754..17272900,17273256..17273486, FT 17279797..17279976,17280718..17280857) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-004" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:AL834169.1" FT mRNA complement(join(17394281..17395772,17396583..17396711, FT 17397901..17397986,17401351..17402318,17405759..17405910, FT 17409040..17409633,17409731..17409921)) FT /gene="PADI2" FT /locus_tag="RP1-37C10.6-002" FT /product="peptidyl arginine deiminase, type II" FT /note="match: cDNAs: Em:AK127006.1" FT polyA_signal complement(17405545..17405550) FT polyA_site complement(17405526) FT mRNA join(BX284668.4:80972..81044,BX284668.4:81123..81184, FT BX284668.4:81266..81431,BX284668.4:82128..82234, FT BX284668.4:88478..88574,BX284668.4:89746..89979, FT BX284668.4:90731..90930,17270595..17270777, FT 17271957..17272101,17272795..17272900) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-005" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC033082.1" FT mRNA complement(join(17394095..17395772,17396583..17396711, FT 17397901..17397986,17401351..17401846)) FT /gene="PADI2" FT /locus_tag="RP1-37C10.6-003" FT /product="peptidyl arginine deiminase, type II" FT /note="match: cDNAs: Em:AK123164.1" FT mRNA join(BX284668.4:87515..87756,BX284668.4:88478..88574, FT BX284668.4:89237..89320,BX284668.4:89770..89979, FT 17270595..17270777,17271957..17272101,17272754..17272900, FT 17273256..17273899,17274428..17276739,17277035..17278380) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-007" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:AK090414.1" FT mRNA join(BX284668.4:88478..88574,BX284668.4:89237..89320, FT BX284668.4:89770..89979,17270595..17270777, FT 17271957..17272101,17273256..17273486,17279797..17279976, FT 17280718..17280852) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-010" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BG742147.1 Em:BX362630.1" FT mRNA join(BX284668.4:89746..89979,17270595..17270777, FT 17271957..17272101,17272754..17272900,17273256..17273486, FT 17279797..17280857,17281229..17281276) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-006" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC056144.1" FT /note="match: ESTs: Em:BE393305.1" FT mRNA join(BX284668.4:89930..89979,17270595..17270777, FT 17271957..17272101,17272754..17272900,17273256..17273486, FT 17279575..17279976,17280718..17280857) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-008" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: cDNAs: Em:BC006312.1" FT polyA_signal complement(17393274..17393279) FT polyA_site complement(17393256) FT mRNA complement(join(17345217..17345453,17349103..17349225, FT 17350468..17350569,17354244..17354360,17355095..17355231, FT 17359555..17359640,17371256..17371383,17380443..17380665)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-001" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: cDNAs: Em:BC007840.1 Em:BC007840.2 FT Em:D10245.1 Em:M32246.1 Em:U17248.1" FT mRNA complement(join(17359025..17359640,17371256..17371383, FT 17380443..17380526)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-005" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: ESTs: Em:AU122241.1" FT CDS complement(join(17345376..17345453,17349103..17349225, FT 17350468..17350569,17354244..17354360,17355095..17355231, FT 17359555..17359640,17371256..17371383,17380443..17380514)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-001" FT /standard_name="OTTHUMP00000002396" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: proteins: Sw:P21912 Sw:Q9CQA3 Tr:Q7ZYB6 FT Tr:Q9PEF5 Tr:Q9YHT2 Tr:Q9Z1Z5" FT /protein_id="CAB96822.1" FT /translation="MAAVVALSLRRRLPATTLGGACLQASRGAQTAAATAPRIKKFAIY FT RWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGICGSCAMN FT INGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDES FT QEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDS FT RDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKKASV" FT mRNA complement(join(17349103..17349225,17350468..17350569, FT 17354244..17354360,17355149..17355231,17359555..17359640, FT 17371256..17371383,17380443..17380502)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-003" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: ESTs: Em:AV727580.1" FT mRNA complement(join(17354244..17354360,17355095..17355231, FT 17359555..17359640,17371256..17371383,17378750..17378983)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-006" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: ESTs: Em:BI460426.1" FT mRNA complement(join(17350468..17350569,17354244..17354360, FT 17355095..17355231,17359555..17359640,17371256..17371383, FT 17371636..17371714)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-008" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: ESTs: Em:CK001097.1" FT mRNA complement(join(17354151..17354360,17355095..17355231, FT 17359555..17359640,17371256..17371372)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-004" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: ESTs: Em:CA942357.1" FT mRNA complement(join(17345247..17345453,17349103..17349225, FT 17349589..17349655)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-002" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: ESTs: Em:CD105760.1" FT mRNA complement(join(17345247..17345453,17349103..17349531)) FT /gene="SDHB" FT /locus_tag="RP1-37C10.5-007" FT /product="succinate dehydrogenase complex, subunit B, iron FT sulfur (Ip)" FT /note="match: ESTs: Em:CB306362.1" FT polyA_signal complement(17345247..17345252) FT polyA_site complement(17345217) FT mRNA complement(join(17312453..17312853,17313300..17313451, FT 17313541..17313764,17314633..17314729,17314817..17314969, FT 17316186..17316265,17316622..17316782,17318229..17318353, FT 17318504..17318624,17318738..17318897,17318981..17319076, FT 17320124..17320330,17322471..17322659,17322749..17322795, FT 17322881..17322991,17323515..17323670,17326506..17326637, FT 17326741..17326807,17326895..17327029,17328529..17328598, FT 17328791..17328868,17330827..17330906,17331202..17331316, FT 17331509..17331567,17331869..17332051,17332179..17332273, FT 17338224..17338410)) FT /gene="ATP13A2" FT /locus_tag="RP1-37C10.4-002" FT /product="ATPase type 13A2" FT /note="match: cDNAs: Em:BC030267.1" FT mRNA complement(join(17312453..17312853,17312958..17313127, FT 17313300..17313451,17313541..17313764,17314633..17314729, FT 17314817..17314969,17316186..17316265,17316382..17316498, FT 17316622..17316782,17318229..17318353,17318504..17318624, FT 17318738..17318897,17318981..17319076,17320124..17320330, FT 17322471..17322659,17322749..17322795,17322881..17322991, FT 17323515..17323670,17326506..17326637,17326741..17326807, FT 17326895..17327029,17328529..17328598,17328791..17328868, FT 17330827..17330906,17331187..17331316,17331509..17331567, FT 17331869..17332051,17332179..17332273,17338224..17338267)) FT /gene="ATP13A2" FT /locus_tag="RP1-37C10.4-001" FT /product="ATPase type 13A2" FT /note="match: cDNAs: Em:AL354615.1" FT CDS complement(join(17312716..17312853,17312958..17313127, FT 17313300..17313451,17313541..17313764,17314633..17314729, FT 17314817..17314969,17316186..17316265,17316382..17316498, FT 17316622..17316782,17318229..17318353,17318504..17318624, FT 17318738..17318897,17318981..17319076,17320124..17320330, FT 17322471..17322659,17322749..17322795,17322881..17322991, FT 17323515..17323670,17326506..17326637,17326741..17326807, FT 17326895..17327029,17328529..17328598,17328791..17328868, FT 17330827..17330906,17331187..17331316,17331509..17331567, FT 17331869..17332051,17332179..17332273,17338224..17338233)) FT /gene="ATP13A2" FT /locus_tag="RP1-37C10.4-001" FT /standard_name="OTTHUMP00000002399" FT /product="ATPase type 13A2" FT /note="match: proteins: Sw:Q9CTG6 Sw:Q9NQ11 Tr:Q8N4D4 FT Tr:Q8NBS1" FT /protein_id="CAI20366.1" FT /translation="MSADSSPLVGSTPTGYGTLTIGTSIDPLSSSVSSVRLSGYCGSPW FT RVIGYHVVVWMMAGIPLLLFRWKPLWGVRLRLRPCNLAHAETLVIEIRDKEDSSWQLFT FT VQVQTEAIGEGSLEPSPQSQAEDGRSQAAVGAVPEGAWKDTAQLHKSEEAVSVGQKRVL FT RYYLFQGQRYIWIETQQAFYQVSLLDHGRSCDDVHRSRHGLSLQDQMVRKAIYGPNVIS FT IPVKSYPQLLVDEALNPYYGFQAFSIALWLADHYYWYALCIFLISSISICLSLYKTRKQ FT SQTLRDMVKLSMRVCVCRPGGEEEWVDSSELVPGDCLVLPQEGGLMPCDAALVAGECMV FT NESSLTGESIPVLKTALPEGLGPYCAETHRRHTLFCGTLILQARAYVGPHVLAVVTRTG FT FCTAKGGLVSSILHPRPINFKFYKHSMKFVAALSVLALLGTIYSIFILYRNRVPLNEIV FT IRALDLVTVVVPPALPAAMTVCTLYAQSRLRRQGIFCIHPLRINLGGKLQLVCFDKTGT FT LTEDGLDVMGVVPLKGQAFLPLVPEPRRLPVGPLLRALATCHALSRLQDTPVGDPMDLK FT MVESTGWVLEEEPAADSAFGTQVLAVMRPPLWEPQLQAMEEPPVPVSVLHRFPFSSALQ FT RMSVVVAWPGATQPEAYVKGSPELVAGLCNPETVPTDFAQMLQSYTAAGYRVVALASKP FT LPTVPSLEAAQQLTRDTVEGDLSLLGLLVMRNLLKPQTTPVIQALRRTRIRAVMVTGDN FT LQTAVTVARGCGMVAPQEHLIIVHATHPERGQPASLEFLPMESPTAVNGVKDPDQAASY FT TVEPDPRSRHLALSGPTFGIIVKHFPKLLPKVLVQGTVFARMAPEQKTELVCELQKLQY FT CVGMCGDGANDCGALKAADVGISLSQAEASVVSPFTSSMASIECVPMVIREGRCSLDTS FT FSVFKYMALYSLTQFISVLILYTINTNLGDLQFLAIDLVITTTVAVLMSRTGPALVLGR FT VRPPGALLSVPVLSSLLLQMVLVTGVQLGGYFLTLAQPWFVPLNRTVAAPDNLPNYENT FT VVFSLSSFQYLILAAAVSKGAPFRRPLYTNVPFLVALALLSSVLVGLVLVPGLLQGPLA FT LRNITDTGFKLLLLGLVTLNFVGAFMLESVLDQCLPACLRRLRPKRASKKRFKQLEREL FT AEQPWPPLPAGPLR" FT CDS complement(join(17312480..17312853,17313300..17313451, FT 17313541..17313764,17314633..17314729,17314817..17314969, FT 17316186..17316265,17316622..17316782,17318229..17318353, FT 17318504..17318624,17318738..17318897,17318981..17319076, FT 17320124..17320330,17322471..17322659,17322749..17322795, FT 17322881..17322991,17323515..17323670,17326506..17326637, FT 17326741..17326807,17326895..17327029,17328529..17328598, FT 17328791..17328868,17330827..17330906,17331202..17331316, FT 17331509..17331567,17331869..17332051,17332179..17332273, FT 17338224..17338233)) FT /gene="ATP13A2" FT /locus_tag="RP1-37C10.4-002" FT /standard_name="OTTHUMP00000002400" FT /product="ATPase type 13A2" FT /protein_id="CAI20367.1" FT /translation="MSADSSPLVGSTPTGYGTLTIGTSIDPLSSSVSSVRLSGYCGSPW FT RVIGYHVVVWMMAGIPLLLFRWKPLWGVRLRLRPCNLAHAETLVIEIRDKEDSSWQLFT FT VQVQTEAIGEGSLEPSPQSQAEDGRSQAAVGAVPEGAWKDTAQLHKSEEAKRVLRYYLF FT QGQRYIWIETQQAFYQVSLLDHGRSCDDVHRSRHGLSLQDQMVRKAIYGPNVISIPVKS FT YPQLLVDEALNPYYGFQAFSIALWLADHYYWYALCIFLISSISICLSLYKTRKQSQTLR FT DMVKLSMRVCVCRPGGEEEWVDSSELVPGDCLVLPQEGGLMPCDAALVAGECMVNESSL FT TGESIPVLKTALPEGLGPYCAETHRRHTLFCGTLILQARAYVGPHVLAVVTRTGFCTAK FT GGLVSSILHPRPINFKFYKHSMKFVAALSVLALLGTIYSIFILYRNRVPLNEIVIRALD FT LVTVVVPPALPAAMTVCTLYAQSRLRRQGIFCIHPLRINLGGKLQLVCFDKTGTLTEDG FT LDVMGVVPLKGQAFLPLVPEPRRLPVGPLLRALATCHALSRLQDTPVGDPMDLKMVEST FT GWVLEEEPAADSAFGTQVLAVMRPPLWEPQLQAMEEPPVPVSVLHRFPFSSALQRMSVV FT VAWPGATQPEAYVKGSPELVAGLCNPETVPTDFAQMLQSYTAAGYRVVALASKPLPTVP FT SLEAAQQLTRDTVEGDLSLLGLLVMRNLLKPQTTPVIQALRRTRIRAVMVTGDNLQTAV FT TVARGCGMVAPQEHLIIVHATHPERGQPASLEFLPMESPTAVNGVKVLVQGTVFARMAP FT EQKTELVCELQKLQYCVGMCGDGANDCGALKAADVGISLSQAEASVVSPFTSSMASIEC FT VPMVIREGRCSLDTSFSVFKYMALYSLTQFISVLILYTINTNLGDLQFLAIDLVITTTV FT AVLMSRTGPALVLGRVRPPGALLSVPVLSSLLLQMVLVTGVQLGGYFLTLAQPWFVPLN FT RTVAAPDNLPNYENTVVFSLSSFQYLILAAAVSKGAPFRRPLYTNERARPVPPRLPAPP FT PAQAGLQEALQAAGTRAGRAALAAAARRPPEVVQAHGHPRHWNSLPLSHQLDPSPATPP FT PPPPTSLRLATVYTPPPRPPPPWGSVDYCPLPWTIPRRGGSPQLPSVLLSV" FT mRNA complement(join(17321982..17322659,17322749..17322795, FT 17322881..17322991,17323515..17323670,17326506..17326637, FT 17326741..17326807,17326895..17327342)) FT /gene="ATP13A2" FT /locus_tag="RP1-37C10.4-003" FT /product="ATPase type 13A2" FT /note="match: cDNAs: Em:AK130020.1" FT mRNA complement(join(17312454..17312853,17312958..17313451, FT 17313541..17313764,17314633..17314729,17314817..17314969, FT 17316186..17316265,17316382..17316498,17316622..17316782, FT 17318229..17318353)) FT /gene="ATP13A2" FT /locus_tag="RP1-37C10.4-004" FT /product="ATPase type 13A2" FT /note="match: cDNAs: Em:AL833966.1" FT polyA_signal complement(17312472..17312477) FT polyA_site complement(17312453) FT mRNA complement(join(17300997..17301518,17301764..17301837, FT 17302138..17302225,17302996..17303040,17303203..17303289, FT 17303392..17303418,17303604..17303693,17304732..17304809, FT 17307082..17307330)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-001" FT /product="microfibrillar-associated protein 2" FT /note="match: ESTs: Em:BE613836.1" FT /note="match: cDNAs: Em:BC015039.1" FT mRNA complement(join(17302157..17302225,17302996..17303040, FT 17303203..17303418,17303604..17303693,17304732..17304809, FT 17307082..17307127)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-004" FT /product="microfibrillar-associated protein 2" FT /note="match: ESTs: Em:AL703484.1" FT mRNA complement(join(17300997..17301518,17301764..17301837, FT 17302138..17302225,17302996..17303040,17303203..17304809, FT 17307082..17307116)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-002" FT /product="microfibrillar-associated protein 2" FT /note="match: cDNAs: Em:BC028033.1" FT mRNA join(17305421..17305607,17331138..17331586) FT /locus_tag="RP1-37C10.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI831469.1" FT mRNA complement(join(17302744..17303040,17303203..17303418, FT 17303604..17303693,17304732..17304809)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-006" FT /product="microfibrillar-associated protein 2" FT /note="match: ESTs: Em:BI769344.1" FT mRNA complement(join(17302666..17303040,17303203..17303289, FT 17303392..17303418,17303604..17303693,17304732..17304809)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-005" FT /product="microfibrillar-associated protein 2" FT /note="match: ESTs: Em:BI766714.1" FT mRNA complement(join(17300997..17301518,17301764..17301837, FT 17302138..17302225,17302996..17303040,17303203..17303289, FT 17303392..17303418,17303604..17303690,17304732..17304771)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-003" FT /product="microfibrillar-associated protein 2" FT /note="match: ESTs: Em:BC035490.1" FT CDS complement(join(17301415..17301518,17301764..17301837, FT 17302138..17302225,17302996..17303040,17303203..17303289, FT 17303392..17303418,17303604..17303693,17304732..17304768)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-001" FT /standard_name="OTTHUMP00000002397" FT /product="microfibrillar-associated protein 2" FT /note="match: proteins: Sw:P27424 Sw:P55001 Sw:P55002 FT Tr:P55002 Tr:Q8AVW2 Tr:Q99PM0" FT /protein_id="CAB96824.1" FT /translation="MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNP FT DYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPC FT TRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVM FT ASSGLCQSVAASCARSCGSC" FT CDS complement(join(17301415..17301518,17301764..17301837, FT 17302138..17302225,17302996..17303040,17303203..17303289, FT 17303392..17303418,17303604..17303690,17304732..17304768)) FT /gene="MFAP2" FT /locus_tag="RP1-37C10.2-003" FT /standard_name="OTTHUMP00000002398" FT /product="microfibrillar-associated protein 2" FT /protein_id="CAI20368.1" FT /translation="MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPD FT YYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCT FT RLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMA FT SSGLCQSVAASCARSCGSC" FT polyA_signal complement(17301014..17301019) FT polyA_site complement(17300997) FT polyA_site 17299474 FT polyA_site 17299459 FT mRNA join(17296280..17296429,17296748..17296948, FT 17297131..17297462) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-015" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BU607839.1 Em:BU631113.1" FT mRNA join(17292523..17292614,17292903..17293066, FT 17294698..17294913,17296748..17296948,17297131..17297237) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-014" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BF984418.1" FT mRNA join(17274886..17275019,17275294..17275421, FT 17277448..17277833) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-013" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BI000005.1" FT mRNA join(17273362..17273486,17274826..17275019, FT 17275294..17275421,17279575..17279710) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-012" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BQ719098.1" FT mRNA join(17270620..17270777,17271957..17272101, FT 17272754..17272900,17273256..17273486,17278408..17278450) FT /gene="CROCC" FT /locus_tag="RP1-37C10.1-011" FT /product="ciliary rootlet coiled-coil, rootletin" FT /note="match: ESTs: Em:BQ420265.1" FT polyA_site 17267929 FT misc_feature 17483982..17646843 FT /note="annotated region of clone" FT misc_feature 17490714 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 700bp by restriction digest data" FT mRNA join(17516278..17516425,17519460..17519660, FT 17519786..17524112) FT /locus_tag="RP11-380J14.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK127830.1" FT mRNA join(17531621..17531804,17548785..17548965, FT 17550116..17550188,17550862..17550923,17552306..17552423, FT 17552528..17552653,17555120..17555292,17555443..17555546, FT 17556580..17556703,17557067..17557174,17559314..17559465, FT 17563809..17563953,17565111..17565204,17566199..17566278, FT 17567130..17567255,17570505..17572500) FT /gene="PADI1" FT /locus_tag="RP11-380J14.2-001" FT /product="peptidyl arginine deiminase, type I" FT /note="match: cDNAs: Em:AB033768.2 Em:AK026652.1" FT CDS join(17531713..17531804,17548785..17548965, FT 17550116..17550188,17550862..17550923,17552306..17552423, FT 17552528..17552653,17555120..17555292,17555443..17555546, FT 17556580..17556703,17557067..17557174,17559314..17559465, FT 17563809..17563953,17565111..17565204,17566199..17566278, FT 17567130..17567255,17570505..17570738) FT /gene="PADI1" FT /locus_tag="RP11-380J14.2-001" FT /standard_name="OTTHUMP00000002401" FT /product="peptidyl arginine deiminase, type I" FT /note="match: proteins: Sw:O02849 Sw:Q9ULC6 Sw:Q9Z185" FT /protein_id="CAH73165.1" FT /translation="MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGS FT SGVEVFMVYNRTRVKEPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQA FT LGRSVLYLTGVDISLEVDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAE FT PDLTHSWLMSLADLQDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSL FT SDYKQVLGPQCLSYEVERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGTLPEVT FT LFTDTVGFRMAPWIMTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICP FT QVENRNDRWIQDEMEFGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIP FT LPGPSSLDSFGNLDVSPPVTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQ FT APVELYSDWLSVGHVDEFLTFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFD FT GLKHQAKRSINEMLADRHLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKN FT FYAEAFFPDMVNMVVLGKYLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLS FT YHELQGEIHCGTNVRRKPFPFKWWNMVP" FT misc_feature 17533079 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 100bp by restriction digest data" FT mRNA join(17549982..17550188,17550862..17550923, FT 17552306..17552423,17552528..17552653) FT /gene="PADI1" FT /locus_tag="RP11-380J14.2-003" FT /product="peptidyl arginine deiminase, type I" FT /note="match: ESTs: Em:AL698692.1" FT mRNA join(17566127..17567255,17570505..17572499) FT /gene="PADI1" FT /locus_tag="RP11-380J14.2-002" FT /product="peptidyl arginine deiminase, type I" FT /note="match: cDNAs: Em:AK127515.1" FT polyA_signal 17572474..17572479 FT polyA_site 17572500 FT mRNA join(17575593..17575724,17586073..17586253, FT 17588628..17588700,17592154..17592215,17593214..17593331, FT 17594332..17594457,17596728..17596906,17597374..17597477, FT 17597562..17597673,17599835..17599942,17601130..17601281, FT 17603014..17603158,17603269..17603371,17606845..17606924, FT 17607166..17607291,17609341..17610728) FT /gene="PADI3" FT /locus_tag="RP11-380J14.3-001" FT /product="peptidyl arginine deiminase, type III" FT /note="match: cDNAs: Em:AB026831.1 Em:BC041592.1" FT CDS join(17575633..17575724,17586073..17586253, FT 17588628..17588700,17592154..17592215,17593214..17593331, FT 17594332..17594457,17596728..17596906,17597374..17597477, FT 17597562..17597673,17599835..17599942,17601130..17601281, FT 17603014..17603158,17603269..17603371,17606845..17606924, FT 17607166..17607291,17609341..17609574) FT /gene="PADI3" FT /locus_tag="RP11-380J14.3-001" FT /standard_name="OTTHUMP00000002484" FT /product="peptidyl arginine deiminase, type III" FT /note="match: proteins: Sw:Q9ULW8 Sw:Q9Z184 Tr:O57400" FT /protein_id="CAH73166.1" FT /translation="MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGT FT PGVDIYISPNMERGRERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLP FT LAYAVLYLTCVDISLDCDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDV FT QDNCDQHVHCLQDLEDMSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDV FT CEAYRHVLGQDKVSYEVPRLHGDEERFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSA FT SPIFTDTVVFRVAPWIMTPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQA FT ENRNDRWIQDEMELGYVQAPHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDR FT SVSGLDSFGNLEVSPPVVANGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPP FT VELFVDWLAVGHVDEFLSFVPAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGV FT VDDEQVKTISINQVLSNKDLINYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTE FT RKKATAFFPDLVNMLVLGKHLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFT FT PYHMLHGEVHCGTNVCRKPFSFKWWNMVP" FT polyA_signal 17610707..17610712 FT polyA_site 17610728 FT misc_feature 17611948 FT /note="Clone_left_end: RP1-82G18" FT misc_feature 17617385 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 100bp by restriction digest data" FT mRNA join(17634690..17634809, FT complement(AC004824.3:131171..131351), FT complement(AC004824.3:128311..128377), FT complement(AC004824.3:127524..127996)) FT /gene="PADI4" FT /locus_tag="RP1-20B21.1-002" FT /product="peptidyl arginine deiminase, type IV" FT /note="match: cDNAs: Em:AF229067.1" FT mRNA join(17634692..17634809, FT complement(AC004824.3:131171..131351), FT complement(AC004824.3:128311..128377), FT complement(AC004824.3:126094..126161), FT complement(AC004824.3:124165..124282), FT complement(AC004824.3:122507..122632), FT complement(AC004824.3:120199..120377), FT complement(AC004824.3:119918..120021), FT complement(AC004824.3:116181..116292), FT complement(AC004824.3:114272..114379), FT complement(AC004824.3:107633..107787), FT complement(AC004824.3:106193..106337), FT complement(AC004824.3:105861..105963), FT complement(AC004824.3:103412..103482), FT complement(AC004824.3:102912..103040), FT complement(AC004824.3:98316..98798)) FT /gene="PADI4" FT /locus_tag="RP1-20B21.1-001" FT /product="peptidyl arginine deiminase, type IV" FT /note="match: cDNAs: Em:AB017919.1 Em:BC025718.1" FT CDS join(17634718..17634809, FT complement(AC004824.3:131171..131351), FT complement(AC004824.3:128311..128377), FT complement(AC004824.3:126094..126161), FT complement(AC004824.3:124165..124282), FT complement(AC004824.3:122507..122632), FT complement(AC004824.3:120199..120377), FT complement(AC004824.3:119918..120021), FT complement(AC004824.3:116181..116292), FT complement(AC004824.3:114272..114379), FT complement(AC004824.3:107633..107787), FT complement(AC004824.3:106193..106337), FT complement(AC004824.3:105861..105963), FT complement(AC004824.3:103412..103482), FT complement(AC004824.3:102912..103040), FT complement(AC004824.3:98565..98798)) FT /gene="PADI4" FT /locus_tag="RP1-20B21.1-001" FT /standard_name="OTTHUMP00000002482" FT /product="peptidyl arginine deiminase, type IV" FT /note="match: proteins: Sw:O02849 Sw:Q9UM07 Sw:Q9Z185" FT /protein_id="CAH73167.1" FT /translation="MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINAS FT PGVVVDIAHGPPAKKKSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPV FT KALLYLTGVEISLCADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSA FT MDCEDDEVLDSEDLQDMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLS FT SKCSVVLGPKWPSHYLMVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPE FT AVVFQDSVVFRVAPWIMTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEE FT ENMDDQWMQDEMEIGYIQAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTG FT GISGLDSFGNLEVSPPVTVRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQA FT PVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEG FT IKKKKQQKIKNILSNKTLREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEF FT SKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFT FT YHIRHGEVHCGTNVRRKPFSFKWWNMVP" FT CDS join(17634718..17634809, FT complement(AC004824.3:131171..131351), FT complement(AC004824.3:128311..128377), FT complement(AC004824.3:127953..127996)) FT /gene="PADI4" FT /locus_tag="RP1-20B21.1-002" FT /standard_name="OTTHUMP00000002483" FT /product="peptidyl arginine deiminase, type IV" FT /protein_id="CAH73168.1" FT /translation="MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINAS FT PGVVVDIAHGPPAKKKSTGSSTWPLDPGVEVTLTMKVASGSTGDQKVQISYYGPKTPPV FT KALLYLTGVDGVSPCHPGWSAMA" FT misc_feature 17644843 FT /note="Clone_right_end: RP11-380J14" FT misc_feature 17646844..17653308 FT /note="annotated region of clone" FT misc_feature 17649309 FT /note="Clone_left_end: RP1-20B21" FT repeat_region complement(17786719..17786838) FT /rpt_family="MIR" FT repeat_region complement(17786399..17786691) FT /rpt_family="Alu" FT repeat_region complement(17786226..17786398) FT /rpt_family="Alu" FT repeat_region complement(17785813..17786109) FT /rpt_family="Alu" FT repeat_region complement(17785571..17785759) FT /rpt_family="MIR" FT repeat_region complement(17785076..17785233) FT /rpt_family="L1" FT repeat_region complement(17784751..17785053) FT /rpt_family="Alu" FT repeat_region complement(17784473..17784750) FT /rpt_family="Alu" FT repeat_region complement(17784162..17784458) FT /rpt_family="Alu" FT repeat_region complement(17783852..17784160) FT /rpt_family="Alu" FT misc_feature complement(17784125..17784158) FT /note="similar to EST AI051158 (NID:g3306692) oy57b09.x1" FT /note="similar to EST AI418418 (NID:g4264349) tf74e06.x1" FT repeat_region complement(17783666..17783764) FT /rpt_family="L1" FT repeat_region complement(17783607..17783665) FT /rpt_family="Alu" FT repeat_region complement(17783313..17783606) FT /rpt_family="Alu" FT repeat_region complement(17783137..17783312) FT /rpt_family="Alu" FT repeat_region complement(17782996..17783134) FT /rpt_family="MER1_type" FT repeat_region complement(17782681..17782995) FT /rpt_family="Alu" FT repeat_region complement(17782381..17782679) FT /rpt_family="Alu" FT repeat_region complement(17782243..17782380) FT /rpt_family="MER1_type" FT repeat_region complement(17781904..17782056) FT /rpt_family="ERV1" FT repeat_region complement(17781598..17781903) FT /rpt_family="Alu" FT repeat_region complement(17781516..17781596) FT /rpt_family="Alu" FT repeat_region complement(17781303..17781511) FT /rpt_family="Alu" FT repeat_region complement(17781127..17781281) FT /rpt_family="Alu" FT repeat_region complement(17780834..17781126) FT /rpt_family="Alu" FT repeat_region complement(17780527..17780832) FT /rpt_family="Alu" FT repeat_region complement(17780223..17780523) FT /rpt_family="Alu" FT repeat_region complement(17780083..17780222) FT /rpt_family="Alu" FT repeat_region complement(17780017..17780073) FT /rpt_family="ERV1" FT repeat_region complement(17779724..17780016) FT /rpt_family="Alu" FT repeat_region complement(17779568..17779723) FT /rpt_family="ERV1" FT repeat_region complement(17779426..17779561) FT /rpt_family="L2" FT repeat_region complement(17779359..17779418) FT /rpt_family="MIR" FT repeat_region complement(17778927..17779214) FT /rpt_family="Alu" FT repeat_region complement(17778626..17778923) FT /rpt_family="Alu" FT repeat_region complement(17777752..17778032) FT /rpt_family="Alu" FT repeat_region complement(17777443..17777619) FT /rpt_family="Alu" FT misc_feature complement(17777405..17777452) FT /note="similar to EST AA199185 (NID:g1795189) mv42g09.r1" FT /note="similar to EST AA745069 (NID:g2783833) np73g12.s1" FT /note="similar to EST AI275212 (NID:g3897486) qw09g12.x1" FT /note="similar to EST AI581174 (NID:g4565550) tl94d10.x1" FT /note="similar to EST AI863197 (NID:g5527304) tz44e08.x1" FT misc_feature complement(17777405..17777449) FT /note="similar to EST AI686755 (NID:g4898049) tx09f11.x1" FT repeat_region complement(17777132..17777442) FT /rpt_family="Alu" FT repeat_region complement(17776987..17777131) FT /rpt_family="Alu" FT repeat_region complement(17776394..17776691) FT /rpt_family="Alu" FT repeat_region complement(17776262..17776357) FT /rpt_family="U13" FT repeat_region complement(17775903..17776211) FT /rpt_family="Alu" FT repeat_region complement(17775355..17775638) FT /rpt_family="Alu" FT repeat_region complement(17775026..17775306) FT /rpt_family="Alu" FT repeat_region complement(17774927..17775014) FT /rpt_family="MIR" FT repeat_region complement(17774542..17774926) FT /rpt_family="MaLR" FT repeat_region complement(17774438..17774541) FT /rpt_family="MIR" FT repeat_region complement(17773709..17774004) FT /rpt_family="Alu" FT repeat_region complement(17773279..17773574) FT /rpt_family="Alu" FT repeat_region complement(17772695..17772858) FT /rpt_family="MaLR" FT repeat_region complement(17772430..17772694) FT /rpt_family="Alu" FT repeat_region complement(17772114..17772423) FT /rpt_family="Alu" FT repeat_region complement(17772057..17772097) FT /rpt_family="MaLR" FT repeat_region complement(17771693..17771996) FT /rpt_family="Alu" FT repeat_region complement(17771535..17771603) FT /rpt_family="Alu" FT repeat_region complement(17771394..17771534) FT /rpt_family="Alu" FT repeat_region complement(17771339..17771388) FT /rpt_family="MER1_type" FT repeat_region complement(17771032..17771338) FT /rpt_family="Alu" FT repeat_region complement(17770986..17771031) FT /rpt_family="MER1_type" FT repeat_region complement(17770820..17770985) FT /rpt_family="Alu" FT repeat_region complement(17770512..17770819) FT /rpt_family="Alu" FT repeat_region complement(17770365..17770511) FT /rpt_family="Alu" FT repeat_region complement(17770323..17770364) FT /rpt_family="MER1_type" FT repeat_region complement(17770248..17770329) FT /rpt_family="MIR" FT repeat_region complement(17770174..17770223) FT /rpt_family="MIR" FT repeat_region complement(17769721..17769811) FT /rpt_family="MER1_type" FT repeat_region complement(17769414..17769720) FT /rpt_family="Alu" FT repeat_region complement(17769004..17769282) FT /rpt_family="Alu" FT repeat_region complement(17768677..17768987) FT /rpt_family="Alu" FT repeat_region complement(17766806..17767109) FT /rpt_family="L2" FT misc_feature complement(17766528..17766572) FT /note="similar to EST AA998885 (NID:g4281062)" FT misc_feature complement(17764073..17766477) FT /note="CpG_island (%GC=68.8, o/e=0.90, #CpGs=266)" FT misc_feature complement(17766041..17766206) FT /note="similar to EST AW824494 (NID:g7917658) us13a04.x1" FT misc_feature complement(17766041..17766191) FT /note="similar to EST AA998885 (NID:g4281062)" FT misc_feature complement(17765184..17765630) FT /note="similar to EST AI936636 (NID:g5675506) wd30d03.x1" FT misc_feature complement(17764764..17765018) FT /note="similar to EST AA998885 (NID:g4281062)" FT /note="similar to EST AW824494 (NID:g7917658) us13a04.x1" FT misc_feature complement(17764726..17764854) FT /note="similar to EST AW239425 (NID:g6571815) xb32c11.y1" FT misc_feature complement(17764726..17764770) FT /note="similar to EST AW823007 (NID:g7916084) ur78e11.x1" FT repeat_region complement(17763599..17763654) FT /rpt_family="MIR" FT repeat_region complement(17762728..17763022) FT /rpt_family="Alu" FT repeat_region complement(17762164..17762438) FT /rpt_family="Alu" FT repeat_region complement(17761328..17761597) FT /rpt_family="Alu" FT repeat_region complement(17760645..17761323) FT /rpt_family="ERV1" FT repeat_region complement(17759308..17759483) FT /rpt_family="Alu" FT repeat_region complement(17758313..17758601) FT /rpt_family="Alu" FT repeat_region complement(17757881..17758012) FT /rpt_family="Alu" FT repeat_region complement(17757548..17757856) FT /rpt_family="Alu" FT repeat_region complement(17757259..17757480) FT /rpt_family="Alu" FT repeat_region complement(17757003..17757253) FT /rpt_family="Alu" FT repeat_region complement(17756731..17756998) FT /rpt_family="Alu" FT misc_feature complement(17755602..17755695) FT /note="similar to EST AW239425 (NID:g6571815) xb32c11.y1" FT /note="similar to EST AW823007 (NID:g7916084) ur78e11.x1" FT misc_feature complement(17755602..17755676) FT /note="similar to EST AA674090 (NID:g2647372) vp76e04.r1" FT misc_feature complement(17755602..17755653) FT /note="similar to EST AA848942 (NID:g2936482)" FT repeat_region complement(17755429..17755522) FT /rpt_family="MIR" FT repeat_region complement(17753251..17753555) FT /rpt_family="Alu" FT misc_feature complement(17752037..17752182) FT /note="similar to EST AA821936 (NID:g2891804) vp23f07.r1" FT /note="similar to EST AW660138 (NID:g7425965)" FT misc_feature complement(17752037..17752180) FT /note="similar to EST AA674090 (NID:g2647372) vp76e04.r1" FT /note="similar to EST AA848942 (NID:g2936482)" FT /note="similar to EST AW823007 (NID:g7916084) ur78e11.x1" FT misc_feature complement(17752037..17752139) FT /note="similar to EST AA017937 (NID:g1481221) mh46h08.r1" FT misc_feature complement(17752037..17752088) FT /note="similar to EST W71030 (NID:g1379806) me27e06.r1" FT misc_feature complement(17752037..17752079) FT /note="similar to EST AA139205 (NID:g1701407) mq01g01.r1" FT misc_feature complement(17752037..17752076) FT /note="similar to EST AA671361 (NID:g2643440) vn92b12.r1" FT misc_feature complement(17749201..17749332) FT /note="similar to EST AA017937 (NID:g1481221) mh46h08.r1" FT /note="similar to EST AA139205 (NID:g1701407) mq01g01.r1" FT /note="similar to EST AA671361 (NID:g2643440) vn92b12.r1" FT /note="similar to EST AA674090 (NID:g2647372) vp76e04.r1" FT /note="similar to EST AA848942 (NID:g2936482)" FT /note="similar to EST AW660138 (NID:g7425965)" FT /note="similar to EST AW823007 (NID:g7916084) ur78e11.x1" FT /note="similar to EST W71030 (NID:g1379806) me27e06.r1" FT misc_feature complement(17749264..17749332) FT /note="similar to EST AA821936 (NID:g2891804) vp23f07.r1" FT misc_feature complement(17749201..17749296) FT /note="similar to EST AA418094 (NID:g2079895) zv94a10.r1" FT misc_feature complement(17749201..17749258) FT /note="similar to EST AW356692 (NID:g6860698)" FT misc_feature complement(17748699..17748787) FT /note="similar to EST AA017937 (NID:g1481221) mh46h08.r1" FT /note="similar to EST AA139205 (NID:g1701407) mq01g01.r1" FT /note="similar to EST AA418094 (NID:g2079895) zv94a10.r1" FT /note="similar to EST AA671361 (NID:g2643440) vn92b12.r1" FT /note="similar to EST AA674090 (NID:g2647372) vp76e04.r1" FT /note="similar to EST AA848942 (NID:g2936482)" FT /note="similar to EST AW356692 (NID:g6860698)" FT /note="similar to EST AW660138 (NID:g7425965)" FT /note="similar to EST W71030 (NID:g1379806) me27e06.r1" FT misc_feature complement(17748739..17748787) FT /note="similar to EST AW823007 (NID:g7916084) ur78e11.x1" FT repeat_region complement(17748241..17748550) FT /rpt_family="Alu" FT repeat_region complement(17747721..17748007) FT /rpt_family="Alu" FT misc_feature complement(17747210..17747328) FT /note="similar to EST AA154696 (NID:g1726315) mr96b08.r1" FT misc_feature complement(17747210..17747324) FT /note="similar to EST AA017937 (NID:g1481221) mh46h08.r1" FT /note="similar to EST AA139205 (NID:g1701407) mq01g01.r1" FT /note="similar to EST AA418094 (NID:g2079895) zv94a10.r1" FT /note="similar to EST AA671361 (NID:g2643440) vn92b12.r1" FT /note="similar to EST AW356692 (NID:g6860698)" FT /note="similar to EST AW660138 (NID:g7425965)" FT misc_feature complement(17747213..17747324) FT /note="similar to EST W71030 (NID:g1379806) me27e06.r1" FT misc_feature complement(17747242..17747324) FT /note="similar to EST AA848942 (NID:g2936482)" FT misc_feature complement(17747210..17747318) FT /note="similar to EST AW012985 (NID:g5861862)" FT misc_feature complement(17746495..17746896) FT /note="similar to EST AW303488 (NID:g6713177) xv19g01.x1" FT repeat_region complement(17745570..17745853) FT /rpt_family="Alu" FT misc_feature complement(17745152..17745431) FT /note="similar to EST AA766344 (NID:g2817582) oa31d05.s1" FT repeat_region complement(17744874..17745167) FT /rpt_family="Alu" FT repeat_region complement(17744705..17744787) FT /rpt_family="Alu" FT repeat_region complement(17744428..17744618) FT /rpt_family="MER2_type" FT repeat_region complement(17743886..17744200) FT /rpt_family="Alu" FT repeat_region complement(17743320..17743514) FT /rpt_family="MER1_type" FT misc_feature complement(17742976..17743142) FT /note="similar to EST AA139205 (NID:g1701407) mq01g01.r1" FT /note="similar to EST AA154696 (NID:g1726315) mr96b08.r1" FT /note="similar to EST AW012985 (NID:g5861862)" FT misc_feature complement(17742990..17743142) FT /note="similar to EST AA418094 (NID:g2079895) zv94a10.r1" FT /note="similar to EST AA671361 (NID:g2643440) vn92b12.r1" FT misc_feature complement(17743070..17743142) FT /note="similar to EST AW356692 (NID:g6860698)" FT misc_feature complement(17743085..17743142) FT /note="similar to EST AA017937 (NID:g1481221) mh46h08.r1" FT misc_feature complement(17743112..17743142) FT /note="similar to EST AW660138 (NID:g7425965)" FT misc_feature complement(17742976..17743135) FT /note="similar to EST AW358571 (NID:g6863221)" FT misc_feature complement(17742716..17743085) FT /note="similar to EST AA766616 (NID:g2817854) oa33h10.s1" FT misc_feature complement(17742976..17743019) FT /note="similar to EST AW793611 (NID:g7845481)" FT repeat_region complement(17742284..17742574) FT /rpt_family="Alu" FT repeat_region complement(17741927..17742235) FT /rpt_family="Alu" FT repeat_region complement(17741122..17741415) FT /rpt_family="Alu" FT repeat_region complement(17740745..17741057) FT /rpt_family="Alu" FT repeat_region complement(17740347..17740476) FT /rpt_family="Alu" FT misc_feature complement(17740031..17740213) FT /note="similar to EST AA154696 (NID:g1726315) mr96b08.r1" FT misc_feature complement(17740033..17740213) FT /note="similar to EST AW012985 (NID:g5861862)" FT /note="similar to EST AW793611 (NID:g7845481)" FT misc_feature complement(17740090..17740213) FT /note="similar to EST AW358571 (NID:g6863221)" FT misc_feature complement(17740189..17740213) FT /note="similar to EST AA139205 (NID:g1701407) mq01g01.r1" FT misc_feature complement(17740033..17740156) FT /note="similar to EST AA417999 (NID:g2079818) zv94e10.s1" FT misc_feature complement(17740033..17740063) FT /note="similar to EST AW824915 (NID:g7917992) us09a02.y1" FT misc_feature complement(17739730..17740042) FT /note="similar to EST AA335493 (NID:g1987756)" FT misc_feature complement(17739730..17739992) FT /note="similar to EST AA335581 (NID:g1987844)" FT repeat_region complement(17739800..17739928) FT /rpt_family="Alu" FT misc_feature complement(17739569..17739674) FT /note="similar to EST AA417999 (NID:g2079818) zv94e10.s1" FT /note="similar to EST AW012985 (NID:g5861862)" FT /note="similar to EST AW793611 (NID:g7845481)" FT /note="similar to EST AW824915 (NID:g7917992) us09a02.y1" FT misc_feature complement(17739569..17739615) FT /note="similar to EST AA267655 (NID:g1904392) mz99a11.r1" FT misc_feature complement(17738617..17738690) FT /note="similar to EST AW012985 (NID:g5861862)" FT misc_feature complement(17738618..17738690) FT /note="similar to EST AA267655 (NID:g1904392) mz99a11.r1" FT /note="similar to EST AA417999 (NID:g2079818) zv94e10.s1" FT /note="similar to EST AW824915 (NID:g7917992) us09a02.y1" FT misc_feature complement(17738631..17738690) FT /note="similar to EST AW793611 (NID:g7845481)" FT misc_feature complement(17738618..17738684) FT /note="similar to EST AA942995 (NID:g3102911)" FT misc_feature complement(17738618..17738680) FT /note="similar to EST AW336939 (NID:g6833565)" FT misc_feature complement(17738618..17738656) FT /note="similar to EST AI990778 (NID:g5837659) ws23f10.x1" FT repeat_region complement(17737792..17738096) FT /rpt_family="Alu" FT misc_feature complement(17737582..17738082) FT /note="similar to EST AI302698 (NID:g3962044) qn17b10.x1" FT misc_feature complement(17736470..17736548) FT /note="similar to EST AA900685 (NID:g4233180) mz99a11.r1" FT /note="similar to EST AI236599 (NID:g3830105)" FT misc_feature complement(17736470..17736547) FT /note="similar to EST AA267655 (NID:g1904392) mz99a11.r1" FT /note="similar to EST AA417999 (NID:g2079818) zv94e10.s1" FT /note="similar to EST AA942995 (NID:g3102911)" FT /note="similar to EST AI990778 (NID:g5837659) ws23f10.x1" FT /note="similar to EST AW336939 (NID:g6833565)" FT /note="similar to EST AW824915 (NID:g7917992) us09a02.y1" FT misc_feature complement(17736470..17736534) FT /note="similar to EST AU019069 (NID:g3374653)" FT misc_feature complement(17735348..17735690) FT /note="similar to EST AU019069 (NID:g3374653)" FT misc_feature complement(17735349..17735690) FT /note="similar to EST AA900685 (NID:g4233180) mz99a11.r1" FT misc_feature complement(17735350..17735690) FT /note="similar to EST AI990778 (NID:g5837659) ws23f10.x1" FT misc_feature complement(17735352..17735690) FT /note="similar to EST AA942995 (NID:g3102911)" FT misc_feature complement(17735391..17735690) FT /note="similar to EST AA267655 (NID:g1904392) mz99a11.r1" FT misc_feature complement(17735505..17735690) FT /note="similar to EST AW824915 (NID:g7917992) us09a02.y1" FT misc_feature complement(17735515..17735690) FT /note="similar to EST AI236599 (NID:g3830105)" FT misc_feature complement(17735597..17735690) FT /note="similar to EST AW336939 (NID:g6833565)" FT misc_feature complement(17735636..17735690) FT /note="similar to EST AA417999 (NID:g2079818) zv94e10.s1" FT misc_feature complement(17735344..17735651) FT /note="similar to EST AW462923 (NID:g7033091)" FT misc_feature complement(17735350..17735610) FT /note="similar to EST AI969004 (NID:g5765743) wq68b02.x1" FT misc_feature complement(17734938..17735524) FT /note="similar to EST AA312851 (NID:g1965178)" FT misc_feature complement(17735152..17735516) FT /note="similar to EST T08999 (NID:g390027)" FT misc_feature complement(17734885..17735297) FT /note="similar to EST AA806841 (NID:g2876417) oc29c08.s1" FT misc_feature complement(17734974..17735130) FT /note="similar to EST AA029691 (NID:g1497113) ze95d04.s1" FT misc_feature complement(17734828..17734987) FT /note="similar to EST AW660379 (NID:g7426206)" FT misc_feature complement(17734562..17734975) FT /note="similar to EST AW381227 (NID:g6885886)" FT misc_feature complement(17734398..17734830) FT /note="similar to EST AA127130 (NID:g1686490) zl87d08.r1" FT misc_feature complement(17734620..17734821) FT /note="similar to EST N79389 (NID:g1242090) yz74a04.r1" FT misc_feature complement(17734515..17734816) FT /note="similar to EST AA362314 (NID:g2014784)" FT misc_feature complement(17734412..17734792) FT /note="similar to EST AA357117 (NID:g2009600)" FT misc_feature complement(17734385..17734791) FT /note="similar to EST AW660379 (NID:g7426206)" FT misc_feature complement(17734259..17734749) FT /note="similar to EST W02324 (NID:g1274303) za08f07.r1" FT misc_feature complement(17734152..17734667) FT /note="similar to EST AL046233 (NID:g5434317)" FT misc_feature complement(17734155..17734640) FT /note="similar to EST AW295512 (NID:g6702148)" FT misc_feature complement(17734155..17734605) FT /note="similar to EST AW002930 (NID:g5849846) wq61b05.x1" FT misc_feature complement(17734288..17734592) FT /note="similar to EST AW384709 (NID:g6889368)" FT misc_feature complement(17734446..17734524) FT /note="similar to EST AA425590 (NID:g2106364) zw48g05.r1" FT misc_feature complement(17734023..17734496) FT /note="similar to EST W65328 (NID:g1373539) zd32g03.r1" FT misc_feature complement(17734155..17734416) FT /note="similar to EST AI570430 (NID:g4533804) tm76d03.x1" FT misc_feature complement(17734064..17734402) FT /note="similar to EST W03027 (NID:g1275005) za02e03.r1" FT misc_feature complement(17733684..17734243) FT /note="similar to EST AA324531 (NID:g1976777)" FT misc_feature complement(17733997..17734222) FT /note="similar to EST AA317264 (NID:g1969591)" FT misc_feature complement(17733846..17734191) FT /note="similar to EST R39717 (NID:g797173) yh89b08.r1" FT misc_feature complement(17733685..17734189) FT /note="similar to EST AI694035 (NID:g4971375) wd67a08.x1" FT misc_feature complement(17733883..17734170) FT /note="similar to EST H94508 (NID:g1102141) yv19h06.s1" FT misc_feature complement(17733800..17734149) FT /note="similar to EST AA844265 (NID:g2930716) ai94b12.s1" FT misc_feature complement(17733897..17734139) FT /note="similar to EST AW450865 (NID:g6991641)" FT misc_feature complement(17733596..17734050) FT /note="similar to EST AA010942 (NID:g1471969) ze23c10.r1" FT misc_feature complement(17733642..17734035) FT /note="similar to EST AA425590 (NID:g2106364) zw48g05.r1" FT misc_feature complement(17733533..17733976) FT /note="similar to EST W73684 (NID:g1383829) zd55h04.r1" FT misc_feature complement(17733512..17733972) FT /note="similar to EST W16622 (NID:g1291033) zb05g10.r1" FT misc_feature complement(17733559..17733950) FT /note="similar to EST R97341 (NID:g983001) yq52d08.r1" FT misc_feature complement(17733256..17733935) FT /note="similar to EST H99019 (NID:g1123687) yx11c12.s1" FT misc_feature complement(17733407..17733928) FT /note="similar to EST W21894 (NID:g1298776)" FT misc_feature complement(17733791..17733900) FT /note="similar to EST AA523432 (NID:g2264144) ng30c07.s1" FT misc_feature complement(17733813..17733878) FT /note="similar to EST AW300175 (NID:g6709852) xs58e08.x1" FT misc_feature complement(17733284..17733865) FT /note="similar to EST AA098939 (NID:g1644815) zn43c11.s1" FT misc_feature complement(17733258..17733808) FT /note="similar to EST N26063 (NID:g1140411) yx89g03.s1" FT misc_feature complement(17733258..17733735) FT /note="similar to EST AI817025 (NID:g5436104) wj76a08.x1" FT misc_feature complement(17733263..17733724) FT /note="similar to EST AA557460 (NID:g2327937) nk36h04.s1" FT misc_feature complement(17733256..17733718) FT /note="similar to EST AI678893 (NID:g4889075) tu70f07.x1" FT misc_feature complement(17733271..17733702) FT /note="similar to EST R36637 (NID:g793538) yh89b08.s1" FT misc_feature complement(17733278..17733696) FT /note="similar to EST R32879 (NID:g788722) yh75e04.s1" FT misc_feature complement(17733258..17733695) FT /note="similar to EST D11844 (NID:g767819)" FT misc_feature complement(17733256..17733694) FT /note="similar to EST AA523432 (NID:g2264144) ng30c07.s1" FT misc_feature complement(17733420..17733687) FT /note="similar to EST AA641419 (NID:g2566669) nr93a08.s1" FT misc_feature complement(17733256..17733681) FT /note="similar to EST AA126961 (NID:g1686387) zl87d08.s1" FT misc_feature complement(17733270..17733650) FT /note="similar to EST AI005042 (NID:g3214552) ou91c10.x1" FT misc_feature complement(17733548..17733637) FT /note="similar to EST AI236599 (NID:g3830105)" FT misc_feature complement(17733270..17733629) FT /note="similar to EST AW022604 (NID:g5876134) df41c03.y1" FT misc_feature complement(17733270..17733589) FT /note="similar to EST AW193051 (NID:g6471750) xl69e09.x1" FT misc_feature complement(17733273..17733511) FT /note="similar to EST AW169809 (NID:g6401334) xj33a08.x1" FT misc_feature complement(17733256..17733500) FT /note="similar to EST AW300175 (NID:g6709852) xs58e08.x1" FT misc_feature complement(17733275..17733480) FT /note="similar to EST AI236599 (NID:g3830105)" FT misc_feature complement(17733256..17733351) FT /note="similar to EST H94508 (NID:g1102141) yv19h06.s1" FT misc_feature complement(17732150..17732642) FT /note="similar to EST AA577767 (NID:g2355951) nn23g06.s1" FT repeat_region complement(17732046..17732329) FT /rpt_family="Alu" FT repeat_region complement(17731759..17732038) FT /rpt_family="Alu" FT repeat_region complement(17731071..17731354) FT /rpt_family="Alu" FT repeat_region complement(17730149..17730450) FT /rpt_family="Alu" FT repeat_region complement(17729959..17730069) FT /rpt_family="MIR" FT repeat_region complement(17729658..17729768) FT /rpt_family="MER1_type" FT repeat_region complement(17726729..17726996) FT /rpt_family="Alu" FT repeat_region complement(17726557..17726719) FT /rpt_family="Alu" FT repeat_region complement(17726256..17726556) FT /rpt_family="Alu" FT repeat_region complement(17726110..17726255) FT /rpt_family="Alu" FT repeat_region complement(17725814..17726094) FT /rpt_family="Alu" FT repeat_region complement(17724540..17724613) FT /rpt_family="MIR" FT repeat_region complement(17723156..17723232) FT /rpt_family="MIR" FT repeat_region complement(17722951..17723061) FT /rpt_family="MER1_type" FT repeat_region complement(17722601..17722894) FT /rpt_family="Alu" FT repeat_region complement(17721693..17721998) FT /rpt_family="Alu" FT repeat_region complement(17720317..17720390) FT /rpt_family="L2" FT repeat_region complement(17720083..17720270) FT /rpt_family="Alu" FT repeat_region complement(17720030..17720082) FT /rpt_family="Alu" FT repeat_region complement(17719750..17720013) FT /rpt_family="L2" FT repeat_region complement(17719369..17719655) FT /rpt_family="Alu" FT repeat_region complement(17718152..17718300) FT /rpt_family="Alu" FT repeat_region complement(17717714..17718014) FT /rpt_family="Alu" FT repeat_region complement(17717113..17717264) FT /rpt_family="L2" FT repeat_region complement(17716814..17717112) FT /rpt_family="Alu" FT repeat_region complement(17716518..17716811) FT /rpt_family="Alu" FT repeat_region complement(17716491..17716517) FT /rpt_family="L2" FT repeat_region complement(17716430..17716502) FT /rpt_family="L2" FT repeat_region complement(17713963..17714250) FT /rpt_family="Alu" FT repeat_region complement(17713658..17713950) FT /rpt_family="Alu" FT repeat_region complement(17712682..17712799) FT /rpt_family="MIR" FT repeat_region complement(17711649..17712393) FT /rpt_family="L2" FT repeat_region complement(17711573..17711638) FT /rpt_family="Alu" FT repeat_region complement(17710954..17711214) FT /rpt_family="Alu" FT repeat_region complement(17710807..17710932) FT /rpt_family="Alu" FT repeat_region complement(17710660..17710734) FT /rpt_family="MER1_type" FT repeat_region complement(17710364..17710656) FT /rpt_family="Alu" FT repeat_region complement(17710062..17710312) FT /rpt_family="Alu" FT repeat_region complement(17709267..17709577) FT /rpt_family="Alu" FT repeat_region complement(17708754..17708835) FT /rpt_family="MIR" FT repeat_region complement(17707879..17708015) FT /rpt_family="MIR" FT repeat_region complement(17706872..17707140) FT /rpt_family="Alu" FT repeat_region complement(17706683..17706871) FT /rpt_family="Alu" FT repeat_region complement(17705909..17706049) FT /rpt_family="Alu" FT repeat_region complement(17705607..17705908) FT /rpt_family="Alu" FT repeat_region complement(17705443..17705606) FT /rpt_family="Alu" FT repeat_region complement(17705094..17705399) FT /rpt_family="Alu" FT repeat_region complement(17704543..17704852) FT /rpt_family="L2" FT repeat_region complement(17703969..17704505) FT /rpt_family="L2" FT repeat_region complement(17703575..17703771) FT /rpt_family="Alu" FT repeat_region complement(17703367..17703574) FT /rpt_family="Alu" FT repeat_region complement(17703054..17703192) FT /rpt_family="Alu" FT repeat_region complement(17702800..17702981) FT /rpt_family="Alu" FT repeat_region complement(17702471..17702767) FT /rpt_family="Alu" FT repeat_region complement(17702261..17702457) FT /rpt_family="L2" FT repeat_region complement(17701566..17701622) FT /rpt_family="MIR" FT repeat_region complement(17700840..17701128) FT /rpt_family="Alu" FT repeat_region complement(17700483..17700662) FT /rpt_family="MER1_type" FT repeat_region complement(17700287..17700386) FT /rpt_family="MIR" FT repeat_region complement(17699980..17700286) FT /rpt_family="Alu" FT repeat_region complement(17699836..17699969) FT /rpt_family="MIR" FT repeat_region complement(17699032..17699129) FT /rpt_family="MIR" FT repeat_region complement(17697918..17698195) FT /rpt_family="Alu" FT repeat_region complement(17697788..17697907) FT /rpt_family="MER1_type" FT repeat_region complement(17697360..17697578) FT /rpt_family="Alu" FT repeat_region complement(17696991..17697163) FT /rpt_family="ERV1" FT repeat_region complement(17696668..17696851) FT /rpt_family="L1" FT repeat_region complement(17696009..17696091) FT /rpt_family="L2" FT repeat_region complement(17695662..17695966) FT /rpt_family="Alu" FT repeat_region complement(17695397..17695605) FT /rpt_family="ERV1" FT repeat_region complement(17695277..17695396) FT /rpt_family="Alu" FT repeat_region complement(17695044..17695254) FT /rpt_family="ERV1" FT repeat_region complement(17694733..17695043) FT /rpt_family="Alu" FT repeat_region complement(17694592..17694732) FT /rpt_family="ERV1" FT repeat_region complement(17693996..17694324) FT /rpt_family="ERVL" FT repeat_region complement(17693373..17693831) FT /rpt_family="MaLR" FT repeat_region complement(17692542..17692839) FT /rpt_family="Alu" FT repeat_region complement(17692380..17692541) FT /rpt_family="L1" FT repeat_region complement(17692082..17692379) FT /rpt_family="Alu" FT repeat_region complement(17691945..17692081) FT /rpt_family="L1" FT repeat_region complement(17691620..17691944) FT /rpt_family="Alu" FT repeat_region complement(17691583..17691619) FT /rpt_family="L1" FT repeat_region complement(17691496..17691581) FT /rpt_family="Alu" FT repeat_region complement(17691185..17691485) FT /rpt_family="L1" FT repeat_region complement(17691063..17691184) FT /rpt_family="L1" FT misc_feature complement(17690039..17690494) FT /note="similar to EST AW084484 (NID:g6039636) wz24e03.x1" FT misc_feature complement(17690065..17690494) FT /note="similar to EST AA682801 (NID:g2669484) zj16c04.s1" FT misc_feature complement(17690199..17690493) FT /note="similar to EST AI766115 (NID:g5232624) wh70c03.x1" FT misc_feature complement(17689995..17690491) FT /note="similar to EST AA893649 (NID:g3020528)" FT misc_feature complement(17689995..17690474) FT /note="similar to EST AW140490 (NID:g6160231)" FT misc_feature complement(17690017..17690459) FT /note="similar to EST AW467326 (NID:g7037432) he09c11.x1" FT /note="similar to EST AW467802 (NID:g7037832) he24c05.x1" FT misc_feature complement(17689995..17690355) FT /note="similar to EST AW141022 (NID:g6160790)" FT misc_feature complement(17690017..17690296) FT /note="similar to EST AA615302 (NID:g2502530) vo01g07.r1" FT misc_feature complement(17690017..17690295) FT /note="similar to EST AI060554 (NID:g3335977) ub41b05.r1" FT misc_feature complement(17690006..17690282) FT /note="similar to EST AA755011 (NID:g2802209) vv75f08.r1" FT misc_feature complement(17690017..17690282) FT /note="similar to EST AA530662 (NID:g2273368) vj44c02.r1" FT misc_feature complement(17690017..17690251) FT /note="similar to EST AI606759 (NID:g4615926) vv77c08.x1" FT misc_feature complement(17690017..17690245) FT /note="similar to EST AA959066 (NID:g3124259) ua08c12.r1" FT misc_feature complement(17690006..17690239) FT /note="similar to EST AI642802 (NID:g4721277) vv93d01.x1" FT misc_feature complement(17690017..17690239) FT /note="similar to EST AI593004 (NID:g4602052) vu98a07.x1" FT misc_feature complement(17689995..17690186) FT /note="similar to EST AA893650 (NID:g3020529)" FT misc_feature complement(17690017..17690070) FT /note="similar to EST AI616376 (NID:g4625543) vl56b01.y1" FT repeat_region complement(17689613..17689915) FT /rpt_family="Alu" FT repeat_region complement(17689315..17689610) FT /rpt_family="Alu" FT repeat_region complement(17689202..17689311) FT /rpt_family="MIR" FT repeat_region complement(17688868..17689196) FT /rpt_family="L1" FT repeat_region complement(17688592..17688866) FT /rpt_family="Alu" FT repeat_region complement(17688419..17688551) FT /rpt_family="L2" FT repeat_region complement(17688354..17688428) FT /rpt_family="L2" FT repeat_region complement(17688060..17688249) FT /rpt_family="MIR" FT repeat_region complement(17686804..17687024) FT /rpt_family="ERVK" FT repeat_region complement(17686504..17686803) FT /rpt_family="Alu" FT repeat_region complement(17686026..17686503) FT /rpt_family="ERVK" FT misc_feature complement(17685692..17685903) FT /note="similar to EST AI616376 (NID:g4625543) vl56b01.y1" FT misc_feature complement(17685773..17685903) FT /note="similar to EST AA530662 (NID:g2273368) vj44c02.r1" FT /note="similar to EST AI593004 (NID:g4602052) vu98a07.x1" FT misc_feature complement(17685781..17685903) FT /note="similar to EST AA959066 (NID:g3124259) ua08c12.r1" FT misc_feature complement(17685784..17685903) FT /note="similar to EST AW467802 (NID:g7037832) he24c05.x1" FT misc_feature complement(17685790..17685903) FT /note="similar to EST AW467326 (NID:g7037432) he09c11.x1" FT misc_feature complement(17685794..17685903) FT /note="similar to EST AA615302 (NID:g2502530) vo01g07.r1" FT misc_feature complement(17685808..17685903) FT /note="similar to EST AI606759 (NID:g4615926) vv77c08.x1" FT misc_feature complement(17685818..17685903) FT /note="similar to EST AI060554 (NID:g3335977) ub41b05.r1" FT misc_feature complement(17685692..17685870) FT /note="similar to EST AA562512 (NID:g2333977) vl56b01.r1" FT misc_feature complement(17685775..17685855) FT /note="similar to EST AA789362 (NID:g2849482) vv93d01.r1" FT misc_feature complement(17685333..17685403) FT /note="similar to EST T92118 (NID:g724031) ye02e11.r1" FT misc_feature complement(17685344..17685403) FT /note="similar to EST AA789362 (NID:g2849482) vv93d01.r1" FT misc_feature complement(17685333..17685390) FT /note="similar to EST AI589966 (NID:g4599014) tt72b01.x1" FT repeat_region complement(17685127..17685253) FT /rpt_family="MIR" FT repeat_region complement(17684782..17685090) FT /rpt_family="Alu" FT repeat_region complement(17684462..17684757) FT /rpt_family="Alu" FT repeat_region complement(17684147..17684450) FT /rpt_family="Alu" FT misc_feature complement(17683971..17684146) FT /note="similar to EST AA729618 (NID:g2750977) nx56h10.s1" FT misc_feature complement(17683938..17684145) FT /note="similar to EST AI561285 (NID:g4511626) tq23h10.x1" FT /note="similar to EST AI869353 (NID:g5543321) tw39b07.x1" FT misc_feature complement(17683954..17684145) FT /note="similar to EST AA230239 (NID:g1852552) nc13c10.s1" FT /note="similar to EST AA230296 (NID:g1852609) nc13c10.r1" FT /note="similar to EST AA484161 (NID:g2212974) ne88c04.s1" FT /note="similar to EST AA572895 (NID:g2347423) nf20h04.s1" FT /note="similar to EST AA635191 (NID:g2558405) af08d10.s1" FT /note="similar to EST AA664824 (NID:g2619437) nu69e01.s1" FT /note="similar to EST AA664962 (NID:g2619575) nu73a03.s1" FT /note="similar to EST AA724212 (NID:g2741919) ai09f12.s1" FT /note="similar to EST AA782414 (NID:g2841745) ai35g07.s1" FT /note="similar to EST AA782738 (NID:g2842069) aj08b01.s1" FT /note="similar to EST AA899072 (NID:g4231572)" FT /note="similar to EST AA907769 (NID:g3043229) og01a11.s2" FT /note="similar to EST AI150256 (NID:g3678725) qf34f09.x1" FT /note="similar to EST AI208844 (NID:g3770786) qg38h02.x1" FT /note="similar to EST AI356977 (NID:g4108598) qx61h08.x1" FT /note="similar to EST AI410599 (NID:g4254103)" FT /note="similar to EST AI427648 (NID:g4273574) mj90a08.x1" FT /note="similar to EST AI570873 (NID:g4534247) tr68c11.x1" FT /note="similar to EST AI590236 (NID:g4599284) to22c09.x1" FT /note="similar to EST AI632848 (NID:g4684178) tz01a03.x1" FT /note="similar to EST AI690595 (NID:g4901897) tq02c11.x1" FT /note="similar to EST AI817227 (NID:g5436295) wk21c04.x1" FT /note="similar to EST AI969644 (NID:g5766462) wz69h01.x1" FT /note="similar to EST AI991161 (NID:g5838066) wu40a11.x1" FT /note="similar to EST AW131921 (NID:g6133528) xe69f05.x1" FT /note="similar to EST AW273297 (NID:g6660327) xr36g10.x1" FT /note="similar to EST AW439700 (NID:g6975006) hb87e08.x1" FT /note="similar to EST AW768271 (NID:g7700289) hk72d07.x1" FT /note="similar to EST D57658 (NID:g964280)" FT /note="similar to EST W04610 (NID:g1277329) zb92e07.s1" FT misc_feature complement(17683961..17684145) FT /note="similar to EST AA229548 (NID:g1851537) nc13g11.r1" FT /note="similar to EST AV363167 (NID:g6410814)" FT /note="similar to EST D57178 (NID:g963800)" FT misc_feature complement(17683966..17684145) FT /note="similar to EST AA659641 (NID:g2595795) nu84a11.s1" FT misc_feature complement(17683951..17684144) FT /note="similar to EST AV229690 (NID:g6182206)" FT misc_feature complement(17683954..17684144) FT /note="similar to EST AW576091 (NID:g7247630)" FT misc_feature complement(17683961..17684144) FT /note="similar to EST AW404309 (NID:g6923366)" FT misc_feature complement(17683954..17684143) FT /note="similar to EST AI630015 (NID:g4681345)" FT misc_feature complement(17683954..17684142) FT /note="similar to EST AA878525 (NID:g2987490) oj19c07.s1" FT /note="similar to EST AI051158 (NID:g3306692) oy57b09.x1" FT misc_feature complement(17683961..17684142) FT /note="similar to EST AJ392713 (NID:g7120852)" FT misc_feature complement(17683938..17684137) FT /note="similar to EST AI686755 (NID:g4898049) tx09f11.x1" FT /note="similar to EST AI863197 (NID:g5527304) tz44e08.x1" FT misc_feature complement(17683954..17684137) FT /note="similar to EST AA745069 (NID:g2783833) np73g12.s1" FT /note="similar to EST AI275212 (NID:g3897486) qw09g12.x1" FT /note="similar to EST AI418418 (NID:g4264349) tf74e06.x1" FT /note="similar to EST AI581174 (NID:g4565550) tl94d10.x1" FT misc_feature complement(17683961..17684137) FT /note="similar to EST AA199185 (NID:g1795189) mv42g09.r1" FT misc_feature complement(17683954..17684136) FT /note="similar to EST AI232729 (NID:g3816609)" FT misc_feature complement(17683968..17684136) FT /note="similar to EST AV119476 (NID:g5301627)" FT misc_feature complement(17683954..17684129) FT /note="similar to EST AI232093 (NID:g3815973)" FT misc_feature complement(17683954..17684114) FT /note="similar to EST AA686436 (NID:g2673034)" FT repeat_region complement(17683669..17683961) FT /rpt_family="Alu" FT misc_feature complement(17683596..17683696) FT /note="similar to EST AV119476 (NID:g5301627)" FT misc_feature complement(17683567..17683675) FT /note="similar to EST AA686436 (NID:g2673034)" FT /note="similar to EST AA899072 (NID:g4231572)" FT /note="similar to EST AI232093 (NID:g3815973)" FT /note="similar to EST AI232729 (NID:g3816609)" FT /note="similar to EST AI410599 (NID:g4254103)" FT misc_feature complement(17683577..17683675) FT /note="similar to EST AA230239 (NID:g1852552) nc13c10.s1" FT /note="similar to EST AA230296 (NID:g1852609) nc13c10.r1" FT /note="similar to EST AA484161 (NID:g2212974) ne88c04.s1" FT /note="similar to EST AA572895 (NID:g2347423) nf20h04.s1" FT /note="similar to EST AA635191 (NID:g2558405) af08d10.s1" FT /note="similar to EST AA664824 (NID:g2619437) nu69e01.s1" FT /note="similar to EST AA664962 (NID:g2619575) nu73a03.s1" FT /note="similar to EST AA724212 (NID:g2741919) ai09f12.s1" FT /note="similar to EST AA782414 (NID:g2841745) ai35g07.s1" FT /note="similar to EST AA782738 (NID:g2842069) aj08b01.s1" FT /note="similar to EST AA907769 (NID:g3043229) og01a11.s2" FT /note="similar to EST AI051158 (NID:g3306692) oy57b09.x1" FT /note="similar to EST AI150256 (NID:g3678725) qf34f09.x1" FT /note="similar to EST AI275212 (NID:g3897486) qw09g12.x1" FT /note="similar to EST AI356977 (NID:g4108598) qx61h08.x1" FT /note="similar to EST AI418418 (NID:g4264349) tf74e06.x1" FT /note="similar to EST AI427648 (NID:g4273574) mj90a08.x1" FT /note="similar to EST AI570873 (NID:g4534247) tr68c11.x1" FT /note="similar to EST AI581174 (NID:g4565550) tl94d10.x1" FT /note="similar to EST AI590236 (NID:g4599284) to22c09.x1" FT /note="similar to EST AI630015 (NID:g4681345)" FT /note="similar to EST AI632848 (NID:g4684178) tz01a03.x1" FT /note="similar to EST AI690595 (NID:g4901897) tq02c11.x1" FT /note="similar to EST AI817227 (NID:g5436295) wk21c04.x1" FT /note="similar to EST AI969644 (NID:g5766462) wz69h01.x1" FT /note="similar to EST AI991161 (NID:g5838066) wu40a11.x1" FT /note="similar to EST AW273297 (NID:g6660327) xr36g10.x1" FT /note="similar to EST AW439700 (NID:g6975006) hb87e08.x1" FT /note="similar to EST AW576091 (NID:g7247630)" FT /note="similar to EST AW768271 (NID:g7700289) hk72d07.x1" FT /note="similar to EST D57658 (NID:g964280)" FT /note="similar to EST W04610 (NID:g1277329) zb92e07.s1" FT misc_feature complement(17683578..17683675) FT /note="similar to EST AI208844 (NID:g3770786) qg38h02.x1" FT /note="similar to EST AW131921 (NID:g6133528) xe69f05.x1" FT misc_feature complement(17683585..17683675) FT /note="similar to EST AA878525 (NID:g2987490) oj19c07.s1" FT misc_feature complement(17683593..17683675) FT /note="similar to EST AA745069 (NID:g2783833) np73g12.s1" FT misc_feature complement(17683621..17683675) FT /note="similar to EST AV229690 (NID:g6182206)" FT misc_feature complement(17683577..17683661) FT /note="similar to EST AI686755 (NID:g4898049) tx09f11.x1" FT /note="similar to EST AI863197 (NID:g5527304) tz44e08.x1" FT misc_feature complement(17683582..17683661) FT /note="similar to EST AI561285 (NID:g4511626) tq23h10.x1" FT misc_feature complement(17683596..17683661) FT /note="similar to EST AI869353 (NID:g5543321) tw39b07.x1" FT repeat_region complement(17683029..17683406) FT /rpt_family="L2" FT misc_feature complement(17682852..17682958) FT /note="similar to EST AA789362 (NID:g2849482) vv93d01.r1" FT misc_feature complement(17682850..17682954) FT /note="similar to EST AI589966 (NID:g4599014) tt72b01.x1" FT misc_feature complement(17682852..17682954) FT /note="similar to EST AA562512 (NID:g2333977) vl56b01.r1" FT /note="similar to EST AI616376 (NID:g4625543) vl56b01.y1" FT /note="similar to EST AW467231 (NID:g7037337) he07g08.x1" FT /note="similar to EST T92118 (NID:g724031) ye02e11.r1" FT misc_feature complement(17682478..17682622) FT /note="similar to EST AA789362 (NID:g2849482) vv93d01.r1" FT /note="similar to EST AW467231 (NID:g7037337) he07g08.x1" FT misc_feature complement(17682504..17682622) FT /note="similar to EST T92118 (NID:g724031) ye02e11.r1" FT misc_feature complement(17682533..17682622) FT /note="similar to EST AA562512 (NID:g2333977) vl56b01.r1" FT /note="similar to EST AI616376 (NID:g4625543) vl56b01.y1" FT repeat_region complement(17682085..17682150) FT /rpt_family="MIR" FT repeat_region complement(17681766..17682049) FT /rpt_family="Alu" FT repeat_region complement(17681391..17681765) FT /rpt_family="L2" FT repeat_region complement(17681321..17681388) FT /rpt_family="MIR" FT misc_feature complement(17681028..17681182) FT /note="similar to EST AW467231 (NID:g7037337) he07g08.x1" FT misc_feature complement(17681112..17681182) FT /note="similar to EST AA789362 (NID:g2849482) vv93d01.r1" FT repeat_region complement(17680454..17680751) FT /rpt_family="Alu" FT repeat_region complement(17680093..17680453) FT /rpt_family="MaLR" FT repeat_region complement(17679678..17679910) FT /rpt_family="Alu" FT repeat_region complement(17678709..17679649) FT /rpt_family="L2" FT repeat_region complement(17678131..17678383) FT /rpt_family="L2" FT repeat_region complement(17677804..17678127) FT /rpt_family="Alu" FT repeat_region complement(17677401..17677715) FT /rpt_family="Alu" FT repeat_region complement(17677205..17677395) FT /rpt_family="L2" FT repeat_region complement(17676753..17677035) FT /rpt_family="MER1_type" FT repeat_region complement(17676295..17676534) FT /rpt_family="L2" FT repeat_region complement(17675919..17676227) FT /rpt_family="Alu" FT misc_feature complement(17675225..17675280) FT /note="similar to EST AW467231 (NID:g7037337) he07g08.x1" FT repeat_region complement(17675099..17675251) FT /rpt_family="MIR" FT repeat_region complement(17673754..17673830) FT /rpt_family="Mariner" FT repeat_region complement(17673442..17673731) FT /rpt_family="Alu" FT repeat_region complement(17672331..17672387) FT /rpt_family="MIR" FT repeat_region complement(17671964..17672310) FT /rpt_family="MaLR" FT repeat_region complement(17670041..17670387) FT /rpt_family="MaLR" FT repeat_region complement(17669939..17670011) FT /rpt_family="MIR" FT repeat_region complement(17669482..17669711) FT /rpt_family="Alu" FT repeat_region complement(17669189..17669481) FT /rpt_family="Alu" FT repeat_region complement(17669111..17669179) FT /rpt_family="MER1_type" FT repeat_region complement(17668082..17668175) FT /rpt_family="L2" FT repeat_region complement(17667593..17667893) FT /rpt_family="Alu" FT repeat_region complement(17667286..17667588) FT /rpt_family="Alu" FT repeat_region complement(17666698..17667224) FT /rpt_family="L2" FT repeat_region complement(17666381..17666493) FT /rpt_family="L2" FT repeat_region complement(17665800..17665858) FT /rpt_family="L2" FT repeat_region complement(17665452..17665632) FT /rpt_family="MIR" FT repeat_region complement(17665084..17665181) FT /rpt_family="MIR" FT repeat_region complement(17664776..17664918) FT /rpt_family="MIR" FT repeat_region complement(17664132..17664434) FT /rpt_family="Alu" FT repeat_region complement(17663649..17663940) FT /rpt_family="Alu" FT repeat_region complement(17661751..17661931) FT /rpt_family="MIR" FT repeat_region complement(17661355..17661642) FT /rpt_family="Alu" FT repeat_region complement(17661174..17661293) FT /rpt_family="MER1_type" FT repeat_region complement(17660803..17661097) FT /rpt_family="Alu" FT repeat_region complement(17660103..17660406) FT /rpt_family="L2" FT repeat_region complement(17659561..17659731) FT /rpt_family="L2" FT repeat_region complement(17659045..17659161) FT /rpt_family="MaLR" FT repeat_region complement(17658745..17659044) FT /rpt_family="Alu" FT repeat_region complement(17658434..17658744) FT /rpt_family="MaLR" FT repeat_region complement(17658132..17658433) FT /rpt_family="Alu" FT repeat_region complement(17658085..17658131) FT /rpt_family="MaLR" FT repeat_region complement(17656823..17657383) FT /rpt_family="ERVL" FT repeat_region complement(17656419..17656547) FT /rpt_family="L1" FT repeat_region complement(17656198..17656391) FT /rpt_family="L1" FT repeat_region complement(17655839..17656196) FT /rpt_family="MER2_type" FT repeat_region complement(17655713..17655834) FT /rpt_family="Alu" FT repeat_region complement(17655645..17655712) FT /rpt_family="MER2_type" FT repeat_region complement(17654860..17655157) FT /rpt_family="Alu" FT repeat_region complement(17654507..17654818) FT /rpt_family="Alu" FT repeat_region complement(17654321..17654417) FT /rpt_family="L1" FT repeat_region complement(17654024..17654320) FT /rpt_family="Alu" FT repeat_region complement(17653699..17654023) FT /rpt_family="L1" FT repeat_region complement(17653400..17653698) FT /rpt_family="Alu" FT repeat_region complement(17652647..17653399) FT /rpt_family="L1" FT misc_feature 17786816..17901951 FT /note="annotated region of clone" FT misc_feature 17803612..17803726 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 17830374..17830407 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 17830709 FT /note="Clone_left_end: RP4-640M19" FT mRNA join(17866330..17866445,AL139250.6:7097..7176, FT AL358593.22:2513..2698,AL358593.22:3499..3532, FT AL358593.22:17180..17271,AL358593.22:18561..18644, FT AL358593.22:22855..23030,AL358593.22:28111..28227, FT AL358593.22:31147..31255,AL358593.22:34392..34498, FT AL358593.22:36917..36994,AL358593.22:38049..38228, FT AL358593.22:39440..39556,AL358593.22:41009..41101, FT AL358593.22:42383..42556,AL358593.22:47374..47519, FT AL358593.22:49601..49615,AL358593.22:49888..50069, FT AL358593.22:52941..53056,AL358593.22:53615..53742, FT AL358593.22:55255..55355,AL358593.22:63607..63728, FT AL358593.22:69689..69775,AL358593.22:70932..71155, FT AL358593.22:71607..71761,AL358593.22:79500..79648, FT AL358593.22:102626..102800,AL358593.22:110211..110333, FT AL358593.22:111901..112922) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-001" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AB046846.1" FT misc_feature 17901951 FT /note="Clone_right_end: RP11-190J18" FT misc_feature 17901952..17913442 FT /note="annotated region of clone" FT mRNA join(17907048..17907127,AL358593.22:2513..2698, FT AL358593.22:3499..3532,AL358593.22:17180..17271, FT AL358593.22:18561..18644,AL358593.22:22855..23030, FT AL358593.22:31147..31255,AL358593.22:34392..34498, FT AL358593.22:36917..36994,AL358593.22:38049..38228, FT AL358593.22:39440..39556,AL358593.22:41009..41101, FT AL358593.22:42383..42556,AL358593.22:47374..47519, FT AL358593.22:49601..49615,AL358593.22:49888..50069, FT AL358593.22:52941..53056,AL358593.22:53615..53742, FT AL358593.22:55255..55355,AL358593.22:63607..63728, FT AL358593.22:69689..69775,AL358593.22:70932..71155, FT AL358593.22:71607..71761,AL358593.22:79500..79648, FT AL358593.22:102626..102800,AL358593.22:110211..110333, FT AL358593.22:111901..112702) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-003" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AK028648.1" FT CDS join(17907091..17907127,AL358593.22:2513..2698, FT AL358593.22:3499..3532,AL358593.22:17180..17271, FT AL358593.22:18561..18644,AL358593.22:22855..23030, FT AL358593.22:28111..28227,AL358593.22:31147..31255, FT AL358593.22:34392..34498,AL358593.22:36917..36994, FT AL358593.22:38049..38228,AL358593.22:39440..39556, FT AL358593.22:41009..41101,AL358593.22:42383..42556, FT AL358593.22:47374..47519,AL358593.22:49601..49615, FT AL358593.22:49888..50069,AL358593.22:52941..53056, FT AL358593.22:53615..53742,AL358593.22:55255..55355, FT AL358593.22:63607..63728,AL358593.22:69689..69775, FT AL358593.22:70932..71155,AL358593.22:71607..71761, FT AL358593.22:79500..79648,AL358593.22:102626..102800, FT AL358593.22:110211..110333,AL358593.22:111901..112433) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-001" FT /standard_name="OTTHUMP00000002615" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: proteins: Tr:Q9HCE6" FT /protein_id="CAI22139.1" FT /translation="MASSNPPPQPAIGDQLVPGVPGPSSEAEDDPGEAFEFDDSDDEED FT TSAALGVPSLAPERDTDPPLIHLDSIPVTDPDPAAAPPGTGVPAWVSNGDAADAAFSGA FT RHSSWKRKSSRRIDRFTFPALEEDVIYDDVPCESPDAHQPGAERNLLYEDAHRAGAPRQ FT AEDLGWSSSEFESYSEDSGEEAKPEVEVEPAKHRVSFQPKLSPDLTRLKERYARTKRDI FT LALRVGGRDMQELKHKYDCKMTQLMKAAKSGTKDGLEKTRMAVMRKVSFLHRKDVLGDS FT EEEDMGLLEVSVSDIKPPAPELGPMPEGLSPQQVVRRHILGSIVQSEGSYVESLKRILQ FT DYRNPLMEMEPKALSARKCQVVFFRVKEILHCHSMFQIALSSRVAEWDSTEKIGDLFVA FT SFSKSMVLDVYSDYVNNFTSAMSIIKKACLTKPAFLEFLKRRQVCSPDRVTLYGLMVKP FT IQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLAEKLNEQKRLADQVAEIQQLT FT KSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIKSKERRVFLLNDMLVCANINF FT KPANHRGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQDGGTYDKDNVLIQHSGAKKA FT SASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNMTVAQDWCLA FT LQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMVVFITPNPLSKISWVNRLHLA FT KIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSSRALSLQLGALVHSPVNCPLL FT GFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRTVKSFPLAAPVLCMEYIPELE FT EEAESRDESPTVADPSATVHPTICLGLQDGSILLYSSVDTGTQCLVSCRSPGLQPVLCL FT RHSPFHLLAGLQDGTLAAYPRTSGGVLWDLESPPVCLTVGPGPVRTLLSLEDAVWASCG FT PWVTVLEATTLQPQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGTSIRLFHTETLEHLQ FT EINIATRTTFLLPGQKHLCVTSLLICQGLLWVGTDQGVIVLLPVPRLEGIPKITGKGMV FT SLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPRAEEDKPDGQAHEPMPDSHVGRELT FT RKKGILLQYRLRSTAHLPGPLLSMREPAPADGAALEHSEEDGSIYEMADDPDIWVRSRP FT CARDAHRKEICSVAIISGGQGYRNFGSALGSSGRQAPCGETDSTLLIWQVPLML" FT CDS join(17907091..17907127,AL358593.22:2513..2698, FT AL358593.22:3499..3532,AL358593.22:17180..17271, FT AL358593.22:18561..18644,AL358593.22:22855..23030, FT AL358593.22:31147..31255,AL358593.22:34392..34498, FT AL358593.22:36917..36994,AL358593.22:38049..38228, FT AL358593.22:39440..39556,AL358593.22:41009..41101, FT AL358593.22:42383..42556,AL358593.22:47374..47519, FT AL358593.22:49601..49615,AL358593.22:49888..50069, FT AL358593.22:52941..53056,AL358593.22:53615..53742, FT AL358593.22:55255..55355,AL358593.22:63607..63728, FT AL358593.22:69689..69775,AL358593.22:70932..71155, FT AL358593.22:71607..71761,AL358593.22:79500..79648, FT AL358593.22:102626..102800,AL358593.22:110211..110333, FT AL358593.22:111901..112433) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-003" FT /standard_name="OTTHUMP00000002617" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /protein_id="CAI22140.1" FT /translation="MASSNPPPQPAIGDQLVPGVPGPSSEAEDDPGEAFEFDDSDDEED FT TSAALGVPSLAPERDTDPPLIHLDSIPVTDPDPAAAPPGTGVPAWVSNGDAADAAFSGA FT RHSSWKRKSSRRIDRFTFPALEEDVIYDDVPCESPDAHQPGAERNLLYEDAHRAGAPRQ FT AEDLGWSSSEFESYSEDSGEEAKPEVEVEPAKHRVSFQPKMTQLMKAAKSGTKDGLEKT FT RMAVMRKVSFLHRKDVLGDSEEEDMGLLEVSVSDIKPPAPELGPMPEGLSPQQVVRRHI FT LGSIVQSEGSYVESLKRILQDYRNPLMEMEPKALSARKCQVVFFRVKEILHCHSMFQIA FT LSSRVAEWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTSAMSIIKKACLTKPAFLEFL FT KRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLA FT EKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIK FT SKERRVFLLNDMLVCANINFKPANHRGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQ FT DGGTYDKDNVLIQHSGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLIS FT TLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMV FT VFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSS FT RALSLQLGALVHSPVNCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRT FT VKSFPLAAPVLCMEYIPELEEEAESRDESPTVADPSATVHPTICLGLQDGSILLYSSVD FT TGTQCLVSCRSPGLQPVLCLRHSPFHLLAGLQDGTLAAYPRTSGGVLWDLESPPVCLTV FT GPGPVRTLLSLEDAVWASCGPWVTVLEATTLQPQQSFEAHQDEAVSVTHMVKAGSGVWM FT AFSSGTSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCVTSLLICQGLLWVGTDQGVI FT VLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPRAEED FT KPDGQAHEPMPDSHVGRELTRKKGILLQYRLRSTAHLPGPLLSMREPAPADGAALEHSE FT EDGSIYEMADDPDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSALGSSGRQAPCG FT ETDSTLLIWQVPLML" FT misc_feature 17909443 FT /note="Clone_left_end: RP11-473A10" FT mRNA join(AL390994.30:79515..79630,17907048..17907127, FT AL358593.22:2513..2698,AL358593.22:3499..3532, FT AL358593.22:17180..17271,AL358593.22:18561..18644, FT AL358593.22:22855..23030,AL358593.22:28111..28227, FT AL358593.22:31147..31255,AL358593.22:34392..34498, FT AL358593.22:36917..36994,AL358593.22:38049..38228, FT AL358593.22:39440..39556,AL358593.22:41009..41101, FT AL358593.22:42383..42556,AL358593.22:47374..47519, FT AL358593.22:49601..49615,AL358593.22:49888..50069, FT AL358593.22:52941..53056,AL358593.22:53615..53742, FT AL358593.22:55255..55355,AL358593.22:63607..63728, FT AL358593.22:69689..69775,AL358593.22:70932..71155, FT AL358593.22:71607..71761,AL358593.22:79500..79648, FT AL358593.22:102626..102800,AL358593.22:110211..110333, FT AL358593.22:111901..112922) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-001" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AB046846.1" FT misc_feature 17913443..18053896 FT /note="annotated region of clone" FT mRNA join(AL139250.6:7097..7176,17913955..17914140, FT 17914941..17914974,17928622..17928713,17930003..17930086, FT 17934297..17934472,17942589..17942697,17945834..17945940, FT 17948359..17948436,17949491..17949670,17950882..17950998, FT 17952451..17952543,17953825..17953998,17958816..17958961, FT 17961043..17961057,17961330..17961511,17964383..17964498, FT 17965057..17965184,17966697..17966797,17975049..17975170, FT 17981131..17981217,17982374..17982597,17983049..17983203, FT 17990942..17991090,18014068..18014242,18021653..18021775, FT 18023343..18024144) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-003" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AK028648.1" FT CDS join(AL139250.6:7140..7176,17913955..17914140, FT 17914941..17914974,17928622..17928713,17930003..17930086, FT 17934297..17934472,17939553..17939669,17942589..17942697, FT 17945834..17945940,17948359..17948436,17949491..17949670, FT 17950882..17950998,17952451..17952543,17953825..17953998, FT 17958816..17958961,17961043..17961057,17961330..17961511, FT 17964383..17964498,17965057..17965184,17966697..17966797, FT 17975049..17975170,17981131..17981217,17982374..17982597, FT 17983049..17983203,17990942..17991090,18014068..18014242, FT 18021653..18021775,18023343..18023875) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-001" FT /standard_name="OTTHUMP00000002615" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: proteins: Tr:Q9HCE6" FT /protein_id="CAH74135.1" FT /translation="MASSNPPPQPAIGDQLVPGVPGPSSEAEDDPGEAFEFDDSDDEED FT TSAALGVPSLAPERDTDPPLIHLDSIPVTDPDPAAAPPGTGVPAWVSNGDAADAAFSGA FT RHSSWKRKSSRRIDRFTFPALEEDVIYDDVPCESPDAHQPGAERNLLYEDAHRAGAPRQ FT AEDLGWSSSEFESYSEDSGEEAKPEVEVEPAKHRVSFQPKLSPDLTRLKERYARTKRDI FT LALRVGGRDMQELKHKYDCKMTQLMKAAKSGTKDGLEKTRMAVMRKVSFLHRKDVLGDS FT EEEDMGLLEVSVSDIKPPAPELGPMPEGLSPQQVVRRHILGSIVQSEGSYVESLKRILQ FT DYRNPLMEMEPKALSARKCQVVFFRVKEILHCHSMFQIALSSRVAEWDSTEKIGDLFVA FT SFSKSMVLDVYSDYVNNFTSAMSIIKKACLTKPAFLEFLKRRQVCSPDRVTLYGLMVKP FT IQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLAEKLNEQKRLADQVAEIQQLT FT KSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIKSKERRVFLLNDMLVCANINF FT KPANHRGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQDGGTYDKDNVLIQHSGAKKA FT SASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNMTVAQDWCLA FT LQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMVVFITPNPLSKISWVNRLHLA FT KIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSSRALSLQLGALVHSPVNCPLL FT GFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRTVKSFPLAAPVLCMEYIPELE FT EEAESRDESPTVADPSATVHPTICLGLQDGSILLYSSVDTGTQCLVSCRSPGLQPVLCL FT RHSPFHLLAGLQDGTLAAYPRTSGGVLWDLESPPVCLTVGPGPVRTLLSLEDAVWASCG FT PWVTVLEATTLQPQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGTSIRLFHTETLEHLQ FT EINIATRTTFLLPGQKHLCVTSLLICQGLLWVGTDQGVIVLLPVPRLEGIPKITGKGMV FT SLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPRAEEDKPDGQAHEPMPDSHVGRELT FT RKKGILLQYRLRSTAHLPGPLLSMREPAPADGAALEHSEEDGSIYEMADDPDIWVRSRP FT CARDAHRKEICSVAIISGGQGYRNFGSALGSSGRQAPCGETDSTLLIWQVPLML" FT CDS join(AL139250.6:7140..7176,17913955..17914140, FT 17914941..17914974,17928622..17928713,17930003..17930086, FT 17934297..17934472,17942589..17942697,17945834..17945940, FT 17948359..17948436,17949491..17949670,17950882..17950998, FT 17952451..17952543,17953825..17953998,17958816..17958961, FT 17961043..17961057,17961330..17961511,17964383..17964498, FT 17965057..17965184,17966697..17966797,17975049..17975170, FT 17981131..17981217,17982374..17982597,17983049..17983203, FT 17990942..17991090,18014068..18014242,18021653..18021775, FT 18023343..18023875) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-003" FT /standard_name="OTTHUMP00000002617" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /protein_id="CAH74136.1" FT /translation="MASSNPPPQPAIGDQLVPGVPGPSSEAEDDPGEAFEFDDSDDEED FT TSAALGVPSLAPERDTDPPLIHLDSIPVTDPDPAAAPPGTGVPAWVSNGDAADAAFSGA FT RHSSWKRKSSRRIDRFTFPALEEDVIYDDVPCESPDAHQPGAERNLLYEDAHRAGAPRQ FT AEDLGWSSSEFESYSEDSGEEAKPEVEVEPAKHRVSFQPKMTQLMKAAKSGTKDGLEKT FT RMAVMRKVSFLHRKDVLGDSEEEDMGLLEVSVSDIKPPAPELGPMPEGLSPQQVVRRHI FT LGSIVQSEGSYVESLKRILQDYRNPLMEMEPKALSARKCQVVFFRVKEILHCHSMFQIA FT LSSRVAEWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTSAMSIIKKACLTKPAFLEFL FT KRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLA FT EKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIK FT SKERRVFLLNDMLVCANINFKPANHRGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQ FT DGGTYDKDNVLIQHSGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLIS FT TLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMV FT VFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSS FT RALSLQLGALVHSPVNCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRT FT VKSFPLAAPVLCMEYIPELEEEAESRDESPTVADPSATVHPTICLGLQDGSILLYSSVD FT TGTQCLVSCRSPGLQPVLCLRHSPFHLLAGLQDGTLAAYPRTSGGVLWDLESPPVCLTV FT GPGPVRTLLSLEDAVWASCGPWVTVLEATTLQPQQSFEAHQDEAVSVTHMVKAGSGVWM FT AFSSGTSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCVTSLLICQGLLWVGTDQGVI FT VLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPRAEED FT KPDGQAHEPMPDSHVGRELTRKKGILLQYRLRSTAHLPGPLLSMREPAPADGAALEHSE FT EDGSIYEMADDPDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSALGSSGRQAPCG FT ETDSTLLIWQVPLML" FT mRNA join(17928666..17928713,17930003..17930086, FT 17930971..17931377) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-007" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: ESTs: Em:BF002440.1" FT misc_feature 17935301 FT /note="Clone_right_end: RP4-640M19" FT mRNA join(17941583..17942697,17945834..17945940, FT 17948359..17948436,17949491..17949670,17950882..17950998, FT 17952451..17952543,17953825..17953998,17958816..17958961, FT 17961330..17961511,17964383..17964498,17965057..17965184, FT 17966697..17966797,17975049..17975170,17981131..17981217, FT 17982374..17982597,17983049..17983203,17990942..17991090, FT 18014068..18014242,18021653..18021775,18023343..18024355) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-004" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AK126877.1" FT mRNA join(17944811..17945017,17945834..17945940, FT 17948359..17948436,17949491..17949670,17950882..17950998, FT 17952451..17952543,17953825..17953998,17958816..17958961, FT 17961330..17961511,17964383..17964498,17965057..17965184, FT 17966697..17966797,17975049..17975170,17981131..17981217, FT 17982374..17982597,17983049..17983203,17990942..17991090, FT 18014068..18014242,18021653..18021775,18023343..18024363) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-002" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AK092020.1 Em:AX747316.1" FT CDS join(17944849..17945017,17945834..17945940, FT 17948359..17948436,17949491..17949670,17950882..17950998, FT 17952451..17952543,17953825..17953998,17958816..17958961, FT 17961330..17961511,17964383..17964498,17965057..17965184, FT 17966697..17966797,17975049..17975170,17981131..17981217, FT 17982374..17982597,17983049..17983203,17990942..17991090, FT 18014068..18014242,18021653..18021775,18023343..18023875) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-002" FT /standard_name="OTTHUMP00000002616" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: proteins: Tr:Q8NAV5" FT /protein_id="CAH74137.1" FT /translation="MLPSSSWGKRKLRGRLGWVRSDARGVMWARQEGLHHPHPHAVIRC FT PSSSSSSVSCSGDSEEEDMGLLEVSVSDIKPPAPELGPMPEGLSPQQVVRRHILGSIVQ FT SEGSYVESLKRILQDYRNPLMEMEPKALSARKCQVVFFRVKEILHCHSMFQIALSSRVA FT EWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTSAMSIIKKACLTKPAFLEFLKRRQVC FT SPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLAEKLNEQ FT KRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIKSKERRV FT FLLNDMLVCANINFKGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQDGGTYDKDNVL FT IQHSGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNM FT TVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMVVFITPNPLSKI FT SWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSSRALSLQLGALV FT HSPVNCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRTVKSFPLAAPVL FT CMEYIPELEEEAESRDESPTVADPSATVHPTICLGLQDGSILLYSSVDTGTQCLVSCRS FT PGLQPVLCLRHSPFHLLAGLQDGTLAAYPRTSGGVLWDLESPPVCLTVGPGPVRTLLSL FT EDAVWASCGPWVTVLEATTLQPQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGTSIRLF FT HTETLEHLQEINIATRTTFLLPGQKHLCVTSLLICQGLLWVGTDQGVIVLLPVPRLEGI FT PKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPRAEEDKPDGQAHEPMP FT DSHVGRELTRKKGILLQYRLRSTAHLPGPLLSMREPAPADGAALEHSEEDGSIYEMADD FT PDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSALGSSGRQAPCGETDSTLLIWQV FT PLML" FT mRNA join(17952502..17952543,17953825..17953998, FT 17958816..17958961,17961330..17961511,17964383..17964498, FT 17965057..17965184,17966697..17966797,17975049..17975170, FT 17981131..17981217,17982374..17982597,17983049..17983203, FT 17990942..17991090,18014068..18014242,18017615..18017687, FT 18021653..18021775,18023343..18024363) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-005" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AK001383.1" FT mRNA join(17960752..17961057,17961330..17961511, FT 17964383..17964498) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-008" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: ESTs: Em:BX496802.1" FT mRNA join(17966248..17966476,17966697..17966797, FT 17975049..17975170,17981131..17981160) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-009" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: ESTs: Em:CA394245.1" FT mRNA join(AL390994.30:79515..79630,AL139250.6:7097..7176, FT 17913955..17914140,17914941..17914974,17928622..17928713, FT 17930003..17930086,17934297..17934472,17939553..17939669, FT 17942589..17942697,17945834..17945940,17948359..17948436, FT 17949491..17949670,17950882..17950998,17952451..17952543, FT 17953825..17953998,17958816..17958961,17961043..17961057, FT 17961330..17961511,17964383..17964498,17965057..17965184, FT 17966697..17966797,17975049..17975170,17981131..17981217, FT 17982374..17982597,17983049..17983203,17990942..17991090, FT 18014068..18014242,18021653..18021775,18023343..18024364) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-001" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AB046846.1" FT misc_feature 18013977 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 350bp by restriction digest data" FT misc_feature 18013977..18014051 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 18013978..18014051 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(18020542..18021775,18023343..18024369) FT /gene="ARHGEF10L" FT /locus_tag="RP11-473A10.1-006" FT /product="Rho guanine nucleotide exchange factor (GEF) FT 10-like" FT /note="match: cDNAs: Em:AK123471.1" FT polyA_signal 18024339..18024344 FT polyA_site 18024364 FT mRNA join(18044182..18044239,18045055..18045215, FT 18048175..18048263,AL136529.14:24276..24577) FT /locus_tag="RP11-473A10.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BX113695.1" FT misc_feature 18049897 FT /note="Clone_left_end: RP4-797K12" FT misc_feature 18053897..18205924 FT /note="annotated region of clone" FT polyA_signal 18076453..18076458 FT polyA_site 18076473 FT mRNA join(18081808..18081999,18149480..18149851, FT 18152262..18153558) FT /gene="ACTL8" FT /locus_tag="RP4-797K12.1-001" FT /product="actin-like 8" FT /note="match: cDNAs: Em:AK057339.1 Em:BC028909.1 FT Em:U20582.1" FT misc_feature 18117962 FT /note="Clone_right_end: RP11-473A10" FT misc_feature 18124377 FT /note="Clone_left_end: RP11-526H9" FT misc_feature 18129349 FT /note="Clone_left_end: RP4-732F8" FT CDS join(18149504..18149851,18152262..18153014) FT /gene="ACTL8" FT /locus_tag="RP4-797K12.1-001" FT /standard_name="OTTHUMP00000002612" FT /product="actin-like 8" FT /note="match: proteins: Tr:Q13104 Tr:Q96M75 Tr:Q9H568" FT /protein_id="CAC15940.1" FT /translation="MAARTVIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPS FT YARRRVSLGIDICHPDTFSYPIERGRILNWEGVQYLWSFVLENHRREQEVPPVIITETP FT LREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQG FT RPLPASGKTLEFAGQDLSAYLLKSLFKEDCDRRCLFQLETVAVTQMNKCYVPQNLGEAL FT DFRERQQSALDESNTYQLPDGSRVELTPMQRVAPEMFFSPQVFEQPGPSIPRAIVESVE FT SCEISLRPLLVSHVMACGGNTLYPGFTKRLFRELMGDHVSSTKATVWEGSNRNFSVWLG FT ASVVAHLSTYQSEWMSREEYGEHMRM" FT polyA_signal 18153535..18153540 FT polyA_site 18153558 FT misc_feature 18184159..18184161 FT /note="Forced join" FT mRNA join(AL358593.22:132740..132797,AL358593.22:133613..133773, FT AL358593.22:136733..136821,18076172..18076473) FT /locus_tag="RP11-473A10.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BX113695.1" FT misc_feature 18203924 FT /note="Clone_right_end: RP4-797K12" FT misc_feature 18231357 FT /note="Clone_right_end: RP4-732F8" FT misc_feature 18276819 FT /note="Clone_right_end: RP4-685N8" FT misc_feature 18315124..18315134 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 18363923 FT /note="Clone_right_end: RP11-387P17" FT misc_feature 18373861..18374257 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 18374132 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 4600bp by restriction digest data" FT misc_feature 18380538 FT /note="Clone_left_end: RP11-174G17" FT misc_feature 18384538..18497828 FT /note="annotated region of clone" FT mRNA complement(join(18493423..18493518,18494241..18494254, FT AL359738.7:6813..6840,AL359738.7:9718..10012)) FT /locus_tag="RP11-174G17.1-001" FT /product="Novel transcript" FT /note="match: ESTs: Em:BU567527.1" FT mRNA join(18434240..18434692,AL359738.7:58564..58676, FT AL050342.42:46977..47098,AL050342.42:90003..90121, FT AL356101.10:2369..2484,AL356101.10:5477..5951, FT AL356101.10:16564..16649,AL356101.10:17054..17246, FT AL356101.10:17647..17685,AL356101.10:18510..18736) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /product="immunoglobin superfamily, member 21" FT /note="match: cDNAs: Em:AB046009.1 Em:AK075316.1 FT Em:BC007618.1" FT /note="match: ESTs: Em:AL533960.2 Em:BF348142.1 FT Em:BF364721.1 Em:BF530391.1 Em:BG818356.1 Em:BM927143.1 FT Em:BX423600.1 Em:F08485.1" FT CDS join(18434623..18434692,AL359738.7:58564..58676, FT AL050342.42:46977..47098,AL050342.42:90003..90121, FT AL356101.10:2369..2484,AL356101.10:5477..5951, FT AL356101.10:16564..16649,AL356101.10:17054..17246, FT AL356101.10:17647..17685,AL356101.10:18510..18580) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /standard_name="OTTHUMP00000002532" FT /product="immunoglobin superfamily, member 21" FT /note="match: proteins: Sw:Q96ID5 Sw:Q96ID5 Tr:Q7TNR6 FT Tr:Q9N0C1" FT /protein_id="CAH70900.1" FT /translation="MRTAPSLRRCVCLLLAAILDLARGYLTVNIEPLPPVVAGDAVTLK FT CNFKTDGRMREIVWYRVTDGGTIKQKIFTFDAMFSTNYSHMENYRKREDLVYQSTVRLP FT EVRISDNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAADTPAPFSRYQA FT QNFTLVCIVSGGKPAPMVYFKRDGEPIDAVPLSEPPAASSGPLQDSRPFRSLLHRDLDD FT TKMQKSLSLLDAENRGGRPYTERPSRGLTPDPNILLQPTTENIPETVVSREFPRWVHSA FT EPTYFLRHSRTPSSDGTVEVRALLTWTLNPQIDNEALFSCEVKHPALSMPMQAEVTLVA FT PKGPKIVMTPSRARVGDTVRILVHGFQNEVFPEPMFTWTRVGSRLLDGSAEFDGKELVL FT ERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNGSIGPTGARLTLVL FT ALTVILELT" FT misc_feature 18480725 FT /note="Clone_right_end: RP11-711N17" FT misc_feature 18493829 FT /note="Clone_left_end: RP11-249D14" FT misc_feature 18497829..18573383 FT /note="annotated region of clone" FT mRNA complement(join(AL365209.13:110886..110981, FT AL365209.13:111704..111717,18502641..18502668, FT 18505546..18505840)) FT /locus_tag="RP11-174G17.1-001" FT /product="Novel transcript" FT /note="match: ESTs: Em:BU567527.1" FT misc_feature 18519478 FT /note="Clone_right_end: RP11-174G17" FT misc_feature 18531086..18531148 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 18544470..18544602 FT /note="Sequence from uni-directional primer reads only" FT mRNA join(AL365209.13:51703..52155,18554392..18554504, FT AL050342.42:46977..47098,AL050342.42:90003..90121, FT AL356101.10:2369..2484,AL356101.10:5477..5951, FT AL356101.10:16564..16649,AL356101.10:17054..17246, FT AL356101.10:17647..17685,AL356101.10:18510..18736) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /product="immunoglobin superfamily, member 21" FT /note="match: cDNAs: Em:AB046009.1 Em:AK075316.1 FT Em:BC007618.1" FT /note="match: ESTs: Em:AL533960.2 Em:BF348142.1 FT Em:BF364721.1 Em:BF530391.1 Em:BG818356.1 Em:BM927143.1 FT Em:BX423600.1 Em:F08485.1" FT CDS join(AL365209.13:52086..52155,18554392..18554504, FT AL050342.42:46977..47098,AL050342.42:90003..90121, FT AL356101.10:2369..2484,AL356101.10:5477..5951, FT AL356101.10:16564..16649,AL356101.10:17054..17246, FT AL356101.10:17647..17685,AL356101.10:18510..18580) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /standard_name="OTTHUMP00000002532" FT /product="immunoglobin superfamily, member 21" FT /note="match: proteins: Sw:Q96ID5 Sw:Q96ID5 Tr:Q7TNR6 FT Tr:Q9N0C1" FT /protein_id="CAH71695.1" FT /translation="MRTAPSLRRCVCLLLAAILDLARGYLTVNIEPLPPVVAGDAVTLK FT CNFKTDGRMREIVWYRVTDGGTIKQKIFTFDAMFSTNYSHMENYRKREDLVYQSTVRLP FT EVRISDNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAADTPAPFSRYQA FT QNFTLVCIVSGGKPAPMVYFKRDGEPIDAVPLSEPPAASSGPLQDSRPFRSLLHRDLDD FT TKMQKSLSLLDAENRGGRPYTERPSRGLTPDPNILLQPTTENIPETVVSREFPRWVHSA FT EPTYFLRHSRTPSSDGTVEVRALLTWTLNPQIDNEALFSCEVKHPALSMPMQAEVTLVA FT PKGPKIVMTPSRARVGDTVRILVHGFQNEVFPEPMFTWTRVGSRLLDGSAEFDGKELVL FT ERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNGSIGPTGARLTLVL FT ALTVILELT" FT misc_feature 18569384 FT /note="Clone_left_end: RP4-655K7" FT misc_feature 18573384..18688240 FT /note="annotated region of clone" FT mRNA join(<18605339..18605378,18618360..18618481, FT 18661386..18661504,AL356101.10:2369..2484, FT AL356101.10:5477..5951,AL356101.10:16564..>16621) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-002" FT /product="immunoglobin superfamily, member 21" FT /note="match: ESTs: Em:BI758183.1" FT CDS join(<18605339..18605378,18618360..18618481, FT 18661386..18661504,AL356101.10:2369..2484, FT AL356101.10:5477..5951,AL356101.10:16564..>16621) FT /codon_start=2 FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-002" FT /standard_name="OTTHUMP00000002533" FT /product="immunoglobin superfamily, member 21" FT /protein_id="CAI22204.1" FT /translation="APSPCSHFNCGSQVTDGGTIKQKIFTFDAMFSTNYSHMENYRKRE FT DLVYQSTVRLPEVRISDNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAA FT DTPAPFSRYQAQNFTLVCIVSGGKPAPMVYFKRDGEPIDAVPLSEPPAASSGPLQDSRP FT FRSLLHRDLDDTKMQKSLSLLDAENRGGRPYTERPSRGLTPDPNILLQPTTENIPETVV FT SREFPRWVHSAEPTYFLRHSRTPSSDGTVEVRALLTWTLNPQIDNEALFSCEVKHPALS FT MPMQAEVTLVAPKGPKIVMTPSRARVGDT" FT mRNA join(AL365209.13:51703..52155,AL359738.7:58564..58676, FT 18618360..18618481,18661386..18661504, FT AL356101.10:2369..2484,AL356101.10:5477..5951, FT AL356101.10:16564..16649,AL356101.10:17054..17246, FT AL356101.10:17647..17685,AL356101.10:18510..18736) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /product="immunoglobin superfamily, member 21" FT /note="match: cDNAs: Em:AB046009.1 Em:AK075316.1 FT Em:BC007618.1" FT /note="match: ESTs: Em:AL533960.2 Em:BF348142.1 FT Em:BF364721.1 Em:BF530391.1 Em:BG818356.1 Em:BM927143.1 FT Em:BX423600.1 Em:F08485.1" FT CDS join(AL365209.13:52086..52155,AL359738.7:58564..58676, FT 18618360..18618481,18661386..18661504, FT AL356101.10:2369..2484,AL356101.10:5477..5951, FT AL356101.10:16564..16649,AL356101.10:17054..17246, FT AL356101.10:17647..17685,AL356101.10:18510..18580) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /standard_name="OTTHUMP00000002532" FT /product="immunoglobin superfamily, member 21" FT /note="match: proteins: Sw:Q96ID5 Sw:Q96ID5 Tr:Q7TNR6 FT Tr:Q9N0C1" FT /protein_id="CAI22205.1" FT /translation="MRTAPSLRRCVCLLLAAILDLARGYLTVNIEPLPPVVAGDAVTLK FT CNFKTDGRMREIVWYRVTDGGTIKQKIFTFDAMFSTNYSHMENYRKREDLVYQSTVRLP FT EVRISDNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAADTPAPFSRYQA FT QNFTLVCIVSGGKPAPMVYFKRDGEPIDAVPLSEPPAASSGPLQDSRPFRSLLHRDLDD FT TKMQKSLSLLDAENRGGRPYTERPSRGLTPDPNILLQPTTENIPETVVSREFPRWVHSA FT EPTYFLRHSRTPSSDGTVEVRALLTWTLNPQIDNEALFSCEVKHPALSMPMQAEVTLVA FT PKGPKIVMTPSRARVGDTVRILVHGFQNEVFPEPMFTWTRVGSRLLDGSAEFDGKELVL FT ERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNGSIGPTGARLTLVL FT ALTVILELT" FT misc_feature 18681505..18681592 FT /note="Single clone region. Within tandem repeat. FT Restriction digest confirms assembly" FT misc_feature 18686240 FT /note="Clone_right_end: RP4-655K7" FT mRNA join(18687861..18688240,AL356101.10:2001..2484, FT AL356101.10:5477..5951,AL356101.10:16564..16621, FT AL356101.10:17054..17246,AL356101.10:17647..17685, FT AL356101.10:18510..18737) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-003" FT /product="immunoglobin superfamily, member 21" FT /note="match: cDNAs: Em:AK123172.1" FT misc_feature 18688241..18710207 FT /note="annotated region of clone" FT mRNA join(18702451..18702889,18703294..18703414) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-004" FT /product="immunoglobin superfamily, member 21" FT /note="match: ESTs: Em:AI681322.1 Em:BE674731.1" FT polyA_signal 18704949..18704955 FT polyA_site 18704977 FT misc_feature 18706208 FT /note="Clone_left_end: RP11-422P22" FT mRNA join(AL050342.42:<33956..33995,AL050342.42:46977..47098, FT AL050342.42:90003..90121,18688609..18688724, FT 18691717..18692191,18702804..>18702861) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-002" FT /product="immunoglobin superfamily, member 21" FT /note="match: ESTs: Em:BI758183.1" FT CDS join(AL050342.42:<33956..33995,AL050342.42:46977..47098, FT AL050342.42:90003..90121,18688609..18688724, FT 18691717..18692191,18702804..>18702861) FT /codon_start=2 FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-002" FT /standard_name="OTTHUMP00000002533" FT /product="immunoglobin superfamily, member 21" FT /protein_id="CAH70255.1" FT /translation="APSPCSHFNCGSQVTDGGTIKQKIFTFDAMFSTNYSHMENYRKRE FT DLVYQSTVRLPEVRISDNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAA FT DTPAPFSRYQAQNFTLVCIVSGGKPAPMVYFKRDGEPIDAVPLSEPPAASSGPLQDSRP FT FRSLLHRDLDDTKMQKSLSLLDAENRGGRPYTERPSRGLTPDPNILLQPTTENIPETVV FT SREFPRWVHSAEPTYFLRHSRTPSSDGTVEVRALLTWTLNPQIDNEALFSCEVKHPALS FT MPMQAEVTLVAPKGPKIVMTPSRARVGDT" FT mRNA join(AL365209.13:51703..52155,AL359738.7:58564..58676, FT AL050342.42:46977..47098,AL050342.42:90003..90121, FT 18688609..18688724,18691717..18692191,18702804..18702889, FT 18703294..18703486,18703887..18703925,18704750..18704976) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /product="immunoglobin superfamily, member 21" FT /note="match: cDNAs: Em:AB046009.1 Em:AK075316.1 FT Em:BC007618.1" FT /note="match: ESTs: Em:AL533960.2 Em:BF348142.1 FT Em:BF364721.1 Em:BF530391.1 Em:BG818356.1 Em:BM927143.1 FT Em:BX423600.1 Em:F08485.1" FT CDS join(AL365209.13:52086..52155,AL359738.7:58564..58676, FT AL050342.42:46977..47098,AL050342.42:90003..90121, FT 18688609..18688724,18691717..18692191,18702804..18702889, FT 18703294..18703486,18703887..18703925,18704750..18704820) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-001" FT /standard_name="OTTHUMP00000002532" FT /product="immunoglobin superfamily, member 21" FT /note="match: proteins: Sw:Q96ID5 Sw:Q96ID5 Tr:Q7TNR6 FT Tr:Q9N0C1" FT /protein_id="CAH70256.1" FT /translation="MRTAPSLRRCVCLLLAAILDLARGYLTVNIEPLPPVVAGDAVTLK FT CNFKTDGRMREIVWYRVTDGGTIKQKIFTFDAMFSTNYSHMENYRKREDLVYQSTVRLP FT EVRISDNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAADTPAPFSRYQA FT QNFTLVCIVSGGKPAPMVYFKRDGEPIDAVPLSEPPAASSGPLQDSRPFRSLLHRDLDD FT TKMQKSLSLLDAENRGGRPYTERPSRGLTPDPNILLQPTTENIPETVVSREFPRWVHSA FT EPTYFLRHSRTPSSDGTVEVRALLTWTLNPQIDNEALFSCEVKHPALSMPMQAEVTLVA FT PKGPKIVMTPSRARVGDTVRILVHGFQNEVFPEPMFTWTRVGSRLLDGSAEFDGKELVL FT ERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNGSIGPTGARLTLVL FT ALTVILELT" FT mRNA join(AL050342.42:116478..116857,18688241..18688724, FT 18691717..18692191,18702804..18702861,18703294..18703486, FT 18703887..18703925,18704750..18704977) FT /gene="IGSF21" FT /locus_tag="RP11-121A23.1-003" FT /product="immunoglobin superfamily, member 21" FT /note="match: cDNAs: Em:AK123172.1" FT misc_feature 18710208..18825527 FT /note="annotated region of clone" FT mRNA join(18712323..18712714,18714910..18715008) FT /locus_tag="RP11-422P22.1-001" FT /product="Putative novel transcript" FT /note="match: ESTs: Em:AA431917.1" FT mRNA 18807503..18812620 FT /gene="KLHDC7A" FT /locus_tag="RP11-422P22.2-001" FT /product="kelch domain containing 7A" FT /note="match: cDNAs: Em:AK056173.1 Em:AK096072.1 FT Em:CR858266.1 Em:CR859888.1 Em:CR859972.1" FT CDS 18807518..18809809 FT /gene="KLHDC7A" FT /locus_tag="RP11-422P22.2-001" FT /standard_name="OTTHUMP00000002531" FT /product="kelch domain containing 7A" FT /note="match: proteins: Tr:Q5R7Y6.1 Tr:Q5R866.1 Tr:Q5RCK4.1 FT Tr:Q5VTJ3.1 Tr:Q8C7K3.2 Tr:Q8N8W6.1" FT /protein_id="CAH73690.2" FT /translation="MQLTGKVVLSAAALLLVTVAYRLYKSRPAPAQRWGGNGQAEAKEE FT AEGSGQPAVQEASPGVLLRGPRRRRSSKRAEAPQGCSCENPRGPYVLVTGATSTDRKPQ FT RKGSGEERGGQGSDSEQVPPCCPSQETRTAVGSNPDPPHFPRLGSEPKSSPAGLIAAAD FT GSCAGGEPSPWQDSKPREHPGLGQLEPPHCHYVAPLQGSSDMNQSWVFTRVIGVSREEA FT GALEAASDVDLTLHQQEGAPNSSYTFSSIARVRMEEHFIQKAEGVEPRLKGKVYDYYVE FT STSQAIFQGRLAPRTAALTEVPSPRPPPGSLGTGAASGGQAGDTKGAAERAASPQTGPW FT PSTRGFSRKESLLQIAENPELQLQPDGFRLPAPPCPDPGALPGLGRSSREPHVQPVAGT FT NFFHIPLTPASAPQVRLDLGNCYEVLTLAKRQNLEALKEAAYKVMSENYLQVLRSPDIY FT GCLSGAERELILQRRLRGRQYLVVADVCPKEDSGGLCCYDDEQDVWRPLARMPPEAVSR FT GCAICSLFNYLFVVSGCQGPGHQPSSRVFCYNPLTGIWSEVCPLNQARPHCRLVALDGH FT LYAIGGECLNSVERYDPRLDRWDFAPPLPSDTFALAHTATVRAKEIFVTGGSLRFLLFR FT FSAQEQRWWAGPTGGSKDRTAEMVAVNGFLYRFDLNRSLGIAVYRCSASTRLWYECATY FT RTPYPDAFQCAVVDNLIYCVGRRSTLCFLADSVSPRFVPKELRSFPAPQGTLLPTVLTL FT PTPDLPQTRV" FT misc_feature 18811202 FT /note="Clone_right_end: RP11-121A23" FT misc_feature 18821528 FT /note="Clone_left_end: RP1-8B22" FT misc_feature complement(18825528..18957287) FT /note="annotated region of clone" FT CDS 18921906..18922112 FT /pseudo FT /locus_tag="RP1-8B22.2-001" FT /product="NADH dehydrogenase subunit 1 pseudogene" FT /note="match: proteins: Sw:O78696 Tr:Q85EA2 Tr:Q8M0Y9 FT Tr:Q9B4S7" FT CDS 18839612..18839881 FT /pseudo FT /locus_tag="RP1-8B22.1-001" FT /product="Dynein, cytoplasmic, light chain 1 (DNCL1) FT pseudogene" FT /note="match: proteins: Sw:P63170 Tr:P61273 Tr:P61285 FT Tr:P63168" FT /db_xref="PSEUDO:CAB41220.1" FT misc_feature complement(18957288..19093303) FT /note="annotated region of clone" FT polyA_site 19062632 FT polyA_signal 19062608..19062613 FT mRNA join(18957500..18958182,18960797..18961032, FT 18961605..18961734,18962731..18962865,19018248..19018447, FT 19027147..19027312,19029588..19029790,19062126..19062632) FT /gene="PAX7" FT /locus_tag="RP3-394P21.1-001" FT /product="paired box 7" FT /note="match: cDNAs: Em:AF014369.1 Em:AF254422.4 FT Em:X96743.1 Em:Z35141.1" FT CDS join(18958098..18958182,18960797..18961032, FT 18961605..18961734,18962731..18962865,19018248..19018447, FT 19027147..19027312,19029588..19029790,19062126..19062533) FT /gene="PAX7" FT /locus_tag="RP3-394P21.1-001" FT /standard_name="OTTHUMP00000002534" FT /product="paired box 7" FT /note="match: proteins: Sw:P23760 Tr:Q12777 Tr:Q8BRF1 FT Tr:Q8QGS3" FT /protein_id="CAA16432.1" FT /translation="MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVF FT INGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGS FT KPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIK FT FGKKEEEDEADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRT FT TFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQL FT AAFNHLLPGGFPPTGMPTLPPYQLPDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLA FT AAAAAADTSSAYGARHSFSSYSDSFMNPAAPSNHMNPVSNGLSPQVMSILGNPSAVPPQ FT PQADFSISPLHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVA FT GYQYGQYGQSECLVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQME FT QFT" FT misc_feature 19093304..19183144 FT /note="annotated region of clone" FT mRNA complement(join(19166093..19167021,19168223..19168346, FT 19175835..19176044,19180707..19181480, FT BX537160.6:2681..2981,BX537160.6:4829..5032)) FT /gene="TAS1R2" FT /locus_tag="RP13-279N23.1-001" FT /product="taste receptor, type 1, member 2" FT /note="match: cDNAs: Em:AF337041.1 Em:AY032623.1" FT CDS complement(join(19166093..19167021,19168223..19168346, FT 19175835..19176044,19180707..19181480, FT BX537160.6:2681..2981,BX537160.6:4829..5010)) FT /gene="TAS1R2" FT /locus_tag="RP13-279N23.1-001" FT /standard_name="OTTHUMP00000002543" FT /product="taste receptor, type 1, member 2" FT /note="match: proteins: Sw:Q8TE23" FT /protein_id="CAI17299.1" FT /translation="MGPRAKTISSLFFLLWVLAEPAENSDFYLPGDYLLGGLFSLHANM FT KGIVHLNFLQVPMCKEYEVKVIGYNLMQAMRFAVEEINNDSSLLPGVLLGYEIVDVCYI FT SNNVQPVLYFLAHEDNLLPIQEDYSNYISRVVAVIGPDNSESVMTVANFLSLFLLPQIT FT YSAISDELRDKVRFPALLRTTPSADHHIEAMVQLMLHFRWNWIIVLVSSDTYGRDNGQL FT LGERVARRDICIAFQETLPTLQPNQNMTSEERQRLVTIVDKLQQSTARVVVVFSPDLTL FT YHFFNEVLRQNFTGAVWIASESWAIDPVLHNLTELRHLGTFLGITIQSVPIPGFSEFRE FT WGPQAGPPPLSRTSQSYTCNQECDNCLNATLSFNTILRLSGERVVYSVYSAVYAVAHAL FT HSLLGCDKSTCTKRVVYPWQLLEEIWKVNFTLLDHQIFFDPQGDVALHLEIVQWQWDRS FT QNPFQSVASYYPLQRQLKNIQDISWHTINNTIPMSMCSKRCQSGQKKKPVGIHVCCFEC FT IDCLPGTFLNHTEDEYECQACPNNEWSYQSETSCFKRQLVFLEWHEAPTIAVALLAALG FT FLSTLAILVIFWRHFQTPIVRSAGGPMCFLMLTLLLVAYMVVPVYVGPPKVSTCLCRQA FT LFPLCFTICISCIAVRSFQIVCAFKMASRFPRAYSYWVRYQGPYVSMAFITVLKMVIVV FT IGMLATGLSPTTRTDPDDPKITIVSCNPNYRNSLLFNTSLDLLLSVVGFSFAYMGKELP FT TNYNEAKFITLSMTFYFTSSVSLCTFMSAYSGVLVTIVDLLVTVLNLLAISLGYFGPKC FT YMILFYPERNTPAYFNSMIQGYTMRRD" FT misc_feature 19106137..19106196 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 19124664..19124753 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 19125066..19125111 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 19125066..19126372 FT /note="Single clone region. Sequence generated from a short FT insert library derived from a single pUC clone. Restriction FT digest data confirm the assembly" FT misc_feature 19125363..19125400 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 19125808..19125834 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(19180707..19181480,BX537160.6:2681..2968, FT BX537160.6:3640..3812,BX537160.6:4825..5049, FT AL954340.4:4207..4325,AL954340.4:5126..5247, FT AL954340.4:6059..6211,AL954340.4:6952..6999, FT AL954340.4:7160..7356,AL954340.4:9044..9117, FT AL954340.4:11444..11631,AL954340.4:12868..12942, FT AL954340.4:13023..13172,AL954340.4:15028..15142, FT AL954340.4:15217..15372,AL080251.23:2286..2333, FT AL080251.23:5184..5276,AL080251.23:5834..6015, FT AL080251.23:24361..24488,AL080251.23:26164..26294, FT AL080251.23:27206..27298,AL080251.23:27785..27905, FT AL080251.23:32725..32864,AL080251.23:34184..34324, FT AL080251.23:35500..35595,AL080251.23:36883..36946)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-005" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:AY325227.1" FT misc_feature 19149701..19150060 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 19149713..19149729 FT /note="Single clone region. Sequence from uni-directional FT dGTP big dye terminator reads only" FT misc_feature 19181144 FT /note="Clone_right_end: RP13-279N23" FT misc_feature 19183145..19198750 FT /note="annotated region of clone" FT mRNA complement(join(AL831755.9:74790..75718, FT AL831755.9:76920..77043,AL831755.9:84532..84741, FT AL831755.9:89404..90177,19183825..19184125, FT 19185973..19186176)) FT /gene="TAS1R2" FT /locus_tag="RP13-279N23.1-001" FT /product="taste receptor, type 1, member 2" FT /note="match: cDNAs: Em:AF337041.1 Em:AY032623.1" FT CDS complement(join(AL831755.9:74790..75718, FT AL831755.9:76920..77043,AL831755.9:84532..84741, FT AL831755.9:89404..90177,19183825..19184125, FT 19185973..19186154)) FT /gene="TAS1R2" FT /locus_tag="RP13-279N23.1-001" FT /standard_name="OTTHUMP00000002543" FT /product="taste receptor, type 1, member 2" FT /note="match: proteins: Sw:Q8TE23" FT /protein_id="CAH69954.1" FT /translation="MGPRAKTISSLFFLLWVLAEPAENSDFYLPGDYLLGGLFSLHANM FT KGIVHLNFLQVPMCKEYEVKVIGYNLMQAMRFAVEEINNDSSLLPGVLLGYEIVDVCYI FT SNNVQPVLYFLAHEDNLLPIQEDYSNYISRVVAVIGPDNSESVMTVANFLSLFLLPQIT FT YSAISDELRDKVRFPALLRTTPSADHHIEAMVQLMLHFRWNWIIVLVSSDTYGRDNGQL FT LGERVARRDICIAFQETLPTLQPNQNMTSEERQRLVTIVDKLQQSTARVVVVFSPDLTL FT YHFFNEVLRQNFTGAVWIASESWAIDPVLHNLTELRHLGTFLGITIQSVPIPGFSEFRE FT WGPQAGPPPLSRTSQSYTCNQECDNCLNATLSFNTILRLSGERVVYSVYSAVYAVAHAL FT HSLLGCDKSTCTKRVVYPWQLLEEIWKVNFTLLDHQIFFDPQGDVALHLEIVQWQWDRS FT QNPFQSVASYYPLQRQLKNIQDISWHTINNTIPMSMCSKRCQSGQKKKPVGIHVCCFEC FT IDCLPGTFLNHTEDEYECQACPNNEWSYQSETSCFKRQLVFLEWHEAPTIAVALLAALG FT FLSTLAILVIFWRHFQTPIVRSAGGPMCFLMLTLLLVAYMVVPVYVGPPKVSTCLCRQA FT LFPLCFTICISCIAVRSFQIVCAFKMASRFPRAYSYWVRYQGPYVSMAFITVLKMVIVV FT IGMLATGLSPTTRTDPDDPKITIVSCNPNYRNSLLFNTSLDLLLSVVGFSFAYMGKELP FT TNYNEAKFITLSMTFYFTSSVSLCTFMSAYSGVLVTIVDLLVTVLNLLAISLGYFGPKC FT YMILFYPERNTPAYFNSMIQGYTMRRD" FT misc_feature 19194751 FT /note="Clone_left_end: RP11-128M10" FT polyA_site complement(19197924) FT polyA_signal complement(19197939..19197944) FT mRNA complement(join(19197926..19198284,AL954340.4:2548..2701, FT AL954340.4:4207..4325,AL954340.4:5126..5247, FT AL954340.4:6059..6211,AL954340.4:6952..6999, FT AL954340.4:7160..7356,AL954340.4:9044..9117, FT AL954340.4:11444..11631,AL954340.4:12868..12942, FT AL954340.4:13023..13172,AL954340.4:15217..15372, FT AL080251.23:2286..2333,AL080251.23:5184..5276, FT AL080251.23:5834..5927,AL080251.23:18284..18375)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-002" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:U24267.1" FT mRNA complement(join(19197926..19198750,AL954340.4:2001..2701, FT AL954340.4:4207..4325,AL954340.4:5126..5247, FT AL954340.4:6059..6211,AL954340.4:6952..6999, FT AL954340.4:7160..7356,AL954340.4:9044..9117, FT AL954340.4:11444..11631,AL954340.4:12868..12942, FT AL954340.4:13023..13172,AL954340.4:15217..15372, FT AL080251.23:2286..2333,AL080251.23:5184..5276, FT AL080251.23:5834..5927,AL080251.23:18284..18603)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-001" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:BC007581.1 Em:BC023600.1 FT Em:U24266.1" FT /note="match: ESTs: Em:AI334155.1 Em:AI380095.1 FT Em:AI953940.1 Em:AL046646.1 Em:AL519947.2 Em:AL552348.2 FT Em:AL556283.2 Em:AL561837.2 Em:AU136507.1 Em:AU141977.1 FT Em:AW571937.1 Em:BE293003.1 Em:BE314257.1 Em:BE541702.1 FT Em:BE869921.1 Em:BE888530.1 Em:BF340277.1 Em:BF980987.1 FT Em:BG714166.1 Em:BG769561.1 Em:BI488643.1 Em:BI911503.1 FT Em:BM044517.1 Em:BM461597.1 Em:BM663173.1 Em:BM666786.1 FT Em:BM685338.1 Em:BM721296.1 Em:BQ053821.1 Em:BQ653747.1 FT Em:BQ901191.1 Em:BQ932271.1 Em:BU552920.1 Em:BU625665.1 FT Em:BU632430.1 Em:BU859004.1 Em:BX098144.1 Em:BX340573.1 FT Em:BX389915.1 Em:BX389916.1 Em:BX391928.1 Em:BX393046.1 FT Em:BX397598.1 Em:BX448042.1 Em:BX448043.1 Em:CB130105.1 FT Em:CB135234.1 Em:CB141231.1 Em:CB146584.1" FT mRNA complement(join(AL831755.9:89404..90177,19183825..19184112, FT 19184784..19184956,19185969..19186193, FT AL954340.4:4207..4325,AL954340.4:5126..5247, FT AL954340.4:6059..6211,AL954340.4:6952..6999, FT AL954340.4:7160..7356,AL954340.4:9044..9117, FT AL954340.4:11444..11631,AL954340.4:12868..12942, FT AL954340.4:13023..13172,AL954340.4:15028..15142, FT AL954340.4:15217..15372,AL080251.23:2286..2333, FT AL080251.23:5184..5276,AL080251.23:5834..6015, FT AL080251.23:24361..24488,AL080251.23:26164..26294, FT AL080251.23:27206..27298,AL080251.23:27785..27905, FT AL080251.23:32725..32864,AL080251.23:34184..34324, FT AL080251.23:35500..35595,AL080251.23:36883..36946)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-005" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:AY325227.1" FT misc_feature 19198751..19212672 FT /note="annotated region of clone" FT misc_feature 19208673 FT /note="Clone_left_end: RP1-93P18" FT misc_feature 19209823..19209932 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(19209054..19209166,19209618..19209692, FT 19209773..19209922,19211967..>19212113)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-004" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: ESTs: Em:AI346540.1" FT CDS complement(join(19209077..19209166,19209618..19209692, FT 19209773..19209922,19211967..>19212113)) FT /codon_start=1 FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-004" FT /standard_name="OTTHUMP00000002547" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /protein_id="CAI39492.1" FT /translation="NKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKT FT MVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAA FT ISPFNFTAIGGNLAGAPALMLREGVVTLPLCQMTKLRHTAVTYLARLSD" FT CDS complement(join(19199339..19199451,19200957..19201075, FT 19201876..19201997,19202809..19202961,19203702..19203749, FT 19203910..19204106,19205794..19205867,19208194..19208381, FT 19209618..19209692,19209773..19209922,19211967..19212122, FT AL080251.23:2286..2333,AL080251.23:5184..5276, FT AL080251.23:5834..5927,AL080251.23:18284..18345)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-001" FT /standard_name="OTTHUMP00000002544" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: proteins: Sw:P30038 Sw:P30038 Sw:P30038" FT /protein_id="CAI39493.1" FT /translation="MLLPAPALRRALLSRPWTGAGLRWKHTSSLKVANEPVLAFTQGSP FT ERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQVSPFNHGHKVAKFCYADKSLLNK FT AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAA FT AELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGA FT PALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG FT INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSA FT FEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFAR FT IKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVY FT PDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQ FT QPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWSYAYMQ" FT mRNA complement(join(<19209605..19209692,19209773..19209922, FT 19211967..19212122,AL080251.23:5184..5276, FT AL080251.23:5834..5927,AL080251.23:18284..18546)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-003" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: ESTs: Em:BU509005.1" FT CDS complement(join(<19209605..19209692,19209773..19209922, FT 19211967..19212122,AL080251.23:5184..5276, FT AL080251.23:5834..5927,AL080251.23:18284..18345)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-003" FT /standard_name="OTTHUMP00000002546" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /protein_id="CAI39494.1" FT /translation="MLLPAPALRRALLSRPWTGAGLRWKHTSSLKVANEPVLAFTQGSP FT ERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQVSSLLNKAIEAALAARKEWDLKP FT IADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVE FT LEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMVRCG" FT mRNA complement(join(BX537160.6:16782..17140,19199298..19199451, FT 19200957..19201075,19201876..19201997,19202809..19202961, FT 19203702..19203749,19203910..19204106,19205794..19205867, FT 19208194..19208381,19209618..19209692,19209773..19209922, FT 19211967..19212122,AL080251.23:2286..2333, FT AL080251.23:5184..5276,AL080251.23:5834..5927, FT AL080251.23:18284..18375)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-002" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:U24267.1" FT mRNA complement(join(BX537160.6:16782..17606,19198751..19199451, FT 19200957..19201075,19201876..19201997,19202809..19202961, FT 19203702..19203749,19203910..19204106,19205794..19205867, FT 19208194..19208381,19209618..19209692,19209773..19209922, FT 19211967..19212122,AL080251.23:2286..2333, FT AL080251.23:5184..5276,AL080251.23:5834..5927, FT AL080251.23:18284..18603)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-001" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: ESTs: Em:AI334155.1 Em:AI380095.1 FT Em:AI953940.1 Em:AL046646.1 Em:AL519947.2 Em:AL552348.2 FT Em:AL556283.2 Em:AL561837.2 Em:AU136507.1 Em:AU141977.1 FT Em:AW571937.1 Em:BE293003.1 Em:BE314257.1 Em:BE541702.1 FT Em:BE869921.1 Em:BE888530.1 Em:BF340277.1 Em:BF980987.1 FT Em:BG714166.1 Em:BG769561.1 Em:BI488643.1 Em:BI911503.1 FT Em:BM044517.1 Em:BM461597.1 Em:BM663173.1 Em:BM666786.1 FT Em:BM685338.1 Em:BM721296.1 Em:BQ053821.1 Em:BQ653747.1 FT Em:BQ901191.1 Em:BQ932271.1 Em:BU552920.1 Em:BU625665.1 FT Em:BU632430.1 Em:BU859004.1 Em:BX098144.1 Em:BX340573.1 FT Em:BX389915.1 Em:BX389916.1 Em:BX391928.1 Em:BX393046.1 FT Em:BX397598.1 Em:BX448042.1 Em:BX448043.1 Em:CB130105.1 FT Em:CB135234.1 Em:CB141231.1 Em:CB146584.1" FT /note="match: cDNAs: Em:BC007581.1 Em:BC023600.1 FT Em:U24266.1" FT mRNA complement(join(AL831755.9:89404..90177, FT BX537160.6:2681..2968,BX537160.6:3640..3812, FT BX537160.6:4825..5049,19200957..19201075, FT 19201876..19201997,19202809..19202961,19203702..19203749, FT 19203910..19204106,19205794..19205867,19208194..19208381, FT 19209618..19209692,19209773..19209922,19211778..19211892, FT 19211967..19212122,AL080251.23:2286..2333, FT AL080251.23:5184..5276,AL080251.23:5834..6015, FT AL080251.23:24361..24488,AL080251.23:26164..26294, FT AL080251.23:27206..27298,AL080251.23:27785..27905, FT AL080251.23:32725..32864,AL080251.23:34184..34324, FT AL080251.23:35500..35595,AL080251.23:36883..36946)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-005" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:AY325227.1" FT misc_feature 19212673..19313888 FT /note="annotated region of clone" FT CDS complement(join(AL954340.4:2589..2701, FT AL954340.4:4207..4325,AL954340.4:5126..5247, FT AL954340.4:6059..6211,AL954340.4:6952..6999, FT AL954340.4:7160..7356,AL954340.4:9044..9117, FT AL954340.4:11444..11631,AL954340.4:12868..12942, FT AL954340.4:13023..13172,AL954340.4:15217..15372, FT 19212958..19213005,19215856..19215948,19216506..19216599, FT 19228956..19229017)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-001" FT /standard_name="OTTHUMP00000002544" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: proteins: Sw:P30038 Sw:P30038 Sw:P30038" FT /protein_id="CAI23417.1" FT /translation="MLLPAPALRRALLSRPWTGAGLRWKHTSSLKVANEPVLAFTQGSP FT ERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQVSPFNHGHKVAKFCYADKSLLNK FT AIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAA FT AELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGA FT PALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCG FT INFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSA FT FEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFAR FT IKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVY FT PDDKYKETLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQ FT QPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWSYAYMQ" FT mRNA complement(join(AL954340.4:<12855..12942, FT AL954340.4:13023..13172,AL954340.4:15217..15372, FT 19215856..19215948,19216506..19216599,19228956..19229218)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-003" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: ESTs: Em:BU509005.1" FT CDS complement(join(AL954340.4:<12855..12942, FT AL954340.4:13023..13172,AL954340.4:15217..15372, FT 19215856..19215948,19216506..19216599,19228956..19229017)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-003" FT /standard_name="OTTHUMP00000002546" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /protein_id="CAI23418.1" FT /translation="MLLPAPALRRALLSRPWTGAGLRWKHTSSLKVANEPVLAFTQGSP FT ERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQVSSLLNKAIEAALAARKEWDLKP FT IADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVE FT LEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMVRCG" FT mRNA complement(join(BX537160.6:16782..17140, FT AL954340.4:2548..2701,AL954340.4:4207..4325, FT AL954340.4:5126..5247,AL954340.4:6059..6211, FT AL954340.4:6952..6999,AL954340.4:7160..7356, FT AL954340.4:9044..9117,AL954340.4:11444..11631, FT AL954340.4:12868..12942,AL954340.4:13023..13172, FT AL954340.4:15217..15372,19212958..19213005, FT 19215856..19215948,19216506..19216599,19228956..19229047)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-002" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:U24267.1" FT mRNA complement(join(BX537160.6:16782..17606, FT AL954340.4:2001..2701,AL954340.4:4207..4325, FT AL954340.4:5126..5247,AL954340.4:6059..6211, FT AL954340.4:6952..6999,AL954340.4:7160..7356, FT AL954340.4:9044..9117,AL954340.4:11444..11631, FT AL954340.4:12868..12942,AL954340.4:13023..13172, FT AL954340.4:15217..15372,19212958..19213005, FT 19215856..19215948,19216506..19216599,19228956..19229275)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-001" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: ESTs: Em:AI334155.1 Em:AI380095.1 FT Em:AI953940.1 Em:AL046646.1 Em:AL519947.2 Em:AL552348.2 FT Em:AL556283.2 Em:AL561837.2 Em:AU136507.1 Em:AU141977.1 FT Em:AW571937.1 Em:BE293003.1 Em:BE314257.1 Em:BE541702.1 FT Em:BE869921.1 Em:BE888530.1 Em:BF340277.1 Em:BF980987.1 FT Em:BG714166.1 Em:BG769561.1 Em:BI488643.1 Em:BI911503.1 FT Em:BM044517.1 Em:BM461597.1 Em:BM663173.1 Em:BM666786.1 FT Em:BM685338.1 Em:BM721296.1 Em:BQ053821.1 Em:BQ653747.1 FT Em:BQ901191.1 Em:BQ932271.1 Em:BU552920.1 Em:BU625665.1 FT Em:BU632430.1 Em:BU859004.1 Em:BX098144.1 Em:BX340573.1 FT Em:BX389915.1 Em:BX389916.1 Em:BX391928.1 Em:BX393046.1 FT Em:BX397598.1 Em:BX448042.1 Em:BX448043.1 Em:CB130105.1 FT Em:CB135234.1 Em:CB141231.1 Em:CB146584.1" FT /note="match: cDNAs: Em:BC007581.1 Em:BC023600.1 FT Em:U24266.1" FT polyA_site complement(19230774) FT polyA_signal complement(19230794..19230799) FT mRNA complement(join(AL831755.9:89404..90177, FT BX537160.6:2681..2968,BX537160.6:3640..3812, FT BX537160.6:4825..5049,AL954340.4:4207..4325, FT AL954340.4:5126..5247,AL954340.4:6059..6211, FT AL954340.4:6952..6999,AL954340.4:7160..7356, FT AL954340.4:9044..9117,AL954340.4:11444..11631, FT AL954340.4:12868..12942,AL954340.4:13023..13172, FT AL954340.4:15028..15142,AL954340.4:15217..15372, FT 19212958..19213005,19215856..19215948,19216506..19216687, FT 19235033..19235160,19236836..19236966,19237878..19237970, FT 19238457..19238577,19243397..19243536,19244856..19244996, FT 19246172..19246267,19247555..19247618)) FT /gene="ALDH4A1" FT /locus_tag="RP11-128M10.1-005" FT /product="aldehyde dehydrogenase 4 family, member A1" FT /note="match: cDNAs: Em:AY325227.1" FT misc_feature 19250379 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 700bps by restriction digest data" FT misc_feature 19250380..19250584 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 19252756 FT /note="Clone_left_end: RP4-540O3" FT mRNA complement(join(19230774..19235160,19236836..19236966, FT 19237878..19237970,19238457..19238577,19243397..19243536, FT 19244856..19244996,19246172..19246267,19247555..19247615, FT 19282162..>19282344)) FT /locus_tag="RP1-93P18.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA669788.1 Em:AI042146.1 FT Em:AI167154.1 Em:AI188211.1 Em:AI207256.1 Em:AI692403.1 FT Em:AI885504.1 Em:AI929168.1 Em:AI967958.1 Em:AW083864.1 FT Em:BE671489.1 Em:BE715177.1 Em:BE783441.1 Em:BE872293.1 FT Em:BF026353.1 Em:BF056932.1 Em:BF890989.1 Em:BG912974.1 FT Em:BI089050.1 Em:BM674170.1 Em:BM701078.1 Em:BM727044.1 FT Em:BM923582.1 Em:BM971473.1 Em:BQ020645.1 Em:BU741290.1 FT Em:CB136961.1 Em:CB242269.1" FT /note="match: cDNAs: Em:AK024480.1 Em:BC027170.1" FT CDS complement(join(19235055..19235160,19236836..19236966, FT 19237878..19237970,19238457..19238577,19243397..19243536, FT 19244856..19244996,19246172..19246267,19247555..19247615, FT 19282162..>19282344)) FT /codon_start=2 FT /locus_tag="RP1-93P18.1-001" FT /standard_name="OTTHUMP00000002592" FT /product="novel protein" FT /note="match: proteins: Tr:Q9H7K0" FT /protein_id="CAI23419.1" FT /translation="WSYTQVRRTGGGGVETVQGPGVSWVHPDGVGVQIDTITPEIRALY FT NVLAKVKRERDEYKRRWEEELAKRMNLQTMVDTLQEAAQEADAIQEEMNEKIERLKAEL FT VVFKGLMSDPMTDLDTKIQEKAMKVDMDICRRIDITAKLCDVAQQRNSEDVSKIFQVVP FT KKKERKVASDDDISEQDGEVNRFSDDEVGSMNITDEMKRMFNQLRETFDFDDDCDSLTW FT EENEDTLLLWEDFTNCNPTIDLQGEQEENLGNLIHETESFFKTRDKEYQETIGQIELEL FT ATAKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPSSVASSDSGSTDE FT IQDEFEREADVEPMVS" FT mRNA complement(join(19234834..19235160,19236836..19236966, FT 19237878..19237970,19238457..19238577,19243397..19243536, FT 19246172..19246267,19247555..19247615,19282162..>19282192)) FT /locus_tag="RP1-93P18.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:BM453098.1" FT CDS complement(join(19235055..19235160,19236836..19236966, FT 19237878..19237970,19238457..19238577,19243397..19243536, FT 19246172..19246267,19247555..19247615,19282162..>19282192)) FT /codon_start=3 FT /locus_tag="RP1-93P18.1-002" FT /standard_name="OTTHUMP00000002593" FT /product="novel protein" FT /protein_id="CAI23420.1" FT /translation="KRERDEYKRRWEEELAKRMNLQTMVDTLQEAAQEADAIQEEMNEK FT IERLKAELVVFKGLMSDVVPKKKERKVASDDDISEQDGEVNRFSDDEVGSMNITDEMKR FT MFNQLRETFDFDDDCDSLTWEENEDTLLLWEDFTNCNPTIDLQGEQEENLGNLIHETES FT FFKTRDKEYQETIGQIELELATAKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSA FT DRNSPSPSSVASSDSGSTDEIQDEFEREADVEPMVS" FT misc_feature 19311888 FT /note="Clone_right_end: RP1-93P18" FT misc_feature 19382126 FT /note="Clone_left_end: RP5-1126H10" FT misc_feature 19386126..19482957 FT /note="annotated region of clone" FT misc_feature 19392227 FT /note="Clone_right_end: RP4-540O3" FT mRNA complement(join(<19447707..19447928,19448428..19448506, FT 19449327..19449554,19451035..19451184,19452940..19453149, FT 19454117..19454233,19454705..19454812,19455472..19455568, FT 19464501..19464675,19465577..19465714,19467841..19468018, FT 19468141..19468271,19470474..19470585,19471280..19471401, FT 19472287..19472427,19473320..19473494,19474487..19474621, FT 19475057..19475120,19476257..19476289,19477071..19477287, FT 19478137..19478353,19478807..19478970,19479795..19479996, FT 19480262..19480433,19481412..19481569,19481935..19482162, FT 19482765..19482917,AL357564.17:2304..2462, FT AL357564.17:3352..3534,AL357564.17:5648..5818, FT AL357564.17:6454..6684,AL357564.17:7126..7273, FT AL357564.17:7364..7434,AL357564.17:7957..8148, FT AL357564.17:9301..9364,AL357564.17:9790..9978, FT AL357564.17:10336..10534,AL357564.17:10786..10886, FT AL357564.17:11193..11294,AL357564.17:12559..12768, FT AL357564.17:13564..>13592)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-007" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: cDNAs: Em:AB093242.2" FT CDS complement(join(<19447707..19447928,19448428..19448506, FT 19449327..19449554,19451035..19451184,19452940..19453149, FT 19454117..19454233,19454705..19454812,19455472..19455568, FT 19464501..19464675,19465577..19465714,19467841..19468018, FT 19468141..19468271,19470474..19470585,19471280..19471401, FT 19472287..19472427,19473320..19473494,19474487..19474621, FT 19475057..19475120,19476257..19476289,19477071..19477287, FT 19478137..19478353,19478807..19478970,19479795..19479996, FT 19480262..19480433,19481412..19481569,19481935..19482162, FT 19482765..19482917,AL357564.17:2304..2462, FT AL357564.17:3352..3534,AL357564.17:5648..5818, FT AL357564.17:6454..6684,AL357564.17:7126..7273, FT AL357564.17:7364..7434,AL357564.17:7957..8148, FT AL357564.17:9301..9364,AL357564.17:9790..9978, FT AL357564.17:10336..10534,AL357564.17:10786..10886, FT AL357564.17:11193..11294,AL357564.17:12559..12768, FT AL357564.17:13564..>13592)) FT /codon_start=1 FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-007" FT /standard_name="OTTHUMP00000002590" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /protein_id="CAI19268.1" FT /translation="LVRLTGDLIVWSDEMNPPQVIRTLLPLLLESSTESVAEISSNSLE FT RILGPAESDEFLARVYEKLITGCYNILANHADPNSGLDESILEECLQYLEKQLESSQAR FT KAMEEFFSDSGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLHLCGSL FT AQLACVEPVRLQAWLTRMTTSPPKDSDQLDVIQENRQLLQLLTTYIVRENSQVGEGVCA FT VLLGTLTPMATEMLANGDGTGFPELMVVMATLASAGQGAGHLQLHNAAVDWLSRCKKYL FT SQKNVVEKLNANVMHGKHVMILECTCHIMSYLADVTNALSQSNGQGPSHLSVDGEERAI FT EVDSDWVEELAVEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVG FT VCTVCAKVCHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSE FT PRISESLVRHASTSSPADKAKVTISDGKVADEEKPKKSSLCRTVEGCREELQNQANFSF FT APLVLDMLNFLMDAIQTNFQQASAVGSSSRAQQALSELHTVEKAVEMTDQLMVPTLGSQ FT EGAFENVRMNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQ FT LSALLKQADSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSG FT SVSDHLVLHPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDLCVDALSPTFYFLLPS FT SKIRDVTFLFNEEGKNIIVIMSSAGYIYTQLMEEASSAQQGPFYVTNVLEINHEDLKDS FT NSQVAGGGVSVYYSHVLQMLFFSYCQGKSFAATISRTTLEVLQLFPINIKSSNGGSKTS FT PALCQWSEVMNHPGLVCCVQQTTGVPLVVMVKPDTFLIQEIKTLPAKAKIQDMVAIRHT FT ACNEQQRTTMILLCEDGSLRIYMANVENTSYWLQPSLQPSSVISIMKPVRKRKTATITT FT RTSSQVTFPIDFFEHNQQLTDVEFGGNDLLQVYNAQQIKHRLNSTGMYVANTKPGGFTI FT EISNNNSTMVMTGMRIQIGTQAIERAPSYIEIFGRTMQLNLSRSRWFDFPFTREEALQA FT DKKLNLFIGASVDPAGVTMIDAVKIYGKTKEQFGWPDEPPEEFPSASVSNICPSNLNQS FT NGTGDSDSAAPTTTSGTVLESSETESLTKLDRLVVSSLEALESCFAVGPIIEKERNKNA FT AQELATLLLSLPAPASVQQQSKSLLASLHTSRSAYHSHKDQALLSKAVQCLNTSSKEGK FT DLDPEVFQRLVITARSIAIMRPNNLVHFTESKLPQMETEGMDEGKEPQKQLEGDCCSFI FT TQLVNHFWKLHASKPKNAFLAPACLPGLTHIEATVNALVDIIHGYCTCELDCINTASKI FT YMQMLLCPDPAVSFSCKQALIRVLRPRNKRRHVTLPSSPRSNTPMGDKDDDDDDDADEK FT MQSSGIPNGGHIRQESQEQSEVDHGDFEMVSESMVLETAENVNNGNPSPLEALLAGAEG FT FPPMLDIPPDADDETMVELAIALSLQQDQQAPASDDEGSTAATDGSTLRTSPADHGGSV FT GSESGGSAVDSVAGEHSVSGRSSAYGDATAEGHPAGPGSVSSSTGAISTTTGHQEGDGS FT EGEGEGETEGDVHTSNRLHMVRLMLLERLLQTLPQLRNVGGVRAIPYMQVILMLTTDLD FT GEDEKDKGALDNLLSQLIAELGMDKKDVSKKNERSALNEVHLVVMRLLSVFMSRTKSGS FT KSSICESSSLISSATAAALLSSGAVDYCLHVLKSLLEYWKSQQNDEEPVATSQLLKPHT FT TSSPPDMSPFFLRQYVKGHAADVFEAYTQLLTEMVLRLPYQIKKITDTNSRIPPPVFDH FT SWFYFLSEYLMIQQTPFVRRQVRKLLLFICGSKEKYRQLRDLHTLDSHVRGIKKLLEEQ FT GIFLRASVVTASSGSALQYDTLISLMEHLKACAEIAAQRTINWQKFCIKDDSVLYFLLQ FT VSFLVDEGVSPVLLQLLSCALCGSKVLAALAASSGSSSASSSSAPVAASSGQATTQSKS FT STKKSKK" FT polyA_site complement(19401000) FT polyA_signal complement(19401029..19401034) FT mRNA complement(join(19401061..19401390,19403234..19403396, FT 19404279..19404321)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-009" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:BG746116.1" FT mRNA complement(join(19401012..19401390,19403234..19403396, FT 19404470..19407800)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-003" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: cDNAs: Em:AK125800.1" FT mRNA complement(join(19477418..19478353,19478807..19478970, FT 19479795..19479996,19480262..19480433,19481412..19481572, FT 19481935..19482162,19482765..19482917, FT AL357564.17:2304..2462,AL357564.17:3352..3534, FT AL357564.17:5648..5818,AL357564.17:6454..6684, FT AL357564.17:7126..7273,AL357564.17:7364..7434, FT AL357564.17:7957..8148,AL357564.17:9301..9364, FT AL357564.17:9790..9978,AL357564.17:10336..10534, FT AL357564.17:10786..10886,AL357564.17:11193..11294, FT AL357564.17:12559..12768,AL357564.17:13564..13721, FT AL357564.17:14972..15069,AL357564.17:16299..16420, FT AL357564.17:18401..18630,AL357564.17:18718..18843, FT AL357564.17:18976..19158,AL357564.17:19856..19984, FT AL357564.17:20491..20570,AL357564.17:22129..22264, FT AL357564.17:22998..>23282)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-008" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: cDNAs: Em:AB037728.1 Em:AK056218.1" FT CDS complement(join(19477982..19478353,19478807..19478970, FT 19479795..19479996,19480262..19480433,19481412..19481572, FT 19481935..19482162,19482765..19482917, FT AL357564.17:2304..2462,AL357564.17:3352..3534, FT AL357564.17:5648..5818,AL357564.17:6454..6684, FT AL357564.17:7126..7273,AL357564.17:7364..7434, FT AL357564.17:7957..8148,AL357564.17:9301..9364, FT AL357564.17:9790..9978,AL357564.17:10336..10534, FT AL357564.17:10786..10886,AL357564.17:11193..11294, FT AL357564.17:12559..12768,AL357564.17:13564..13721, FT AL357564.17:14972..15069,AL357564.17:16299..16420, FT AL357564.17:18401..18630,AL357564.17:18718..18843, FT AL357564.17:18976..19158,AL357564.17:19856..19984, FT AL357564.17:20491..20570,AL357564.17:22129..22264, FT AL357564.17:22998..>23282)) FT /codon_start=1 FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-008" FT /standard_name="OTTHUMP00000002591" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /protein_id="CAI19269.1" FT /translation="RFLSTMKQNALQGVVPSETEDLNVEHLQMLLLIFHNFTETGRRAI FT LSLFVQIIQELSVNMDAQMRFVPLILARLLLIFDYLLHQYSKAPVYLFEQVQHNLLSPP FT FGWASGSQDSNSRRATTPLYHGFKEVEENWSKHFSSDAVPHPRFYCVLSPEASEDDLNR FT LDSVACDVLFSKLVKYDELYAALTALLAAGSQLDTVRRKENKNVTALEACALQYYFLIL FT WRILGILPPSKTYINQLSMNSPEMSECDILHTLRWSSRLRISSYVNWIKDHLIKQGMKA FT EHASSLLELASTTKCSSVKYDVEIVEEYFARQISSFCSIDCTTILQLHEIPSLQSIYTL FT DAAISKVQVSLDEHFSKMAAETDPHKSSEITKNLLPATLQLIDTYASFTRAYLLQNFNE FT EGTTEKPSKEKLQGFAAVLAIGSSRCKANTLGPTLVQNLPSSVQTVCESWNNINTNEFP FT NIGSWRNAFANDTIPSESYISAVQAAHLGTLCSQSLPLAASLKHTLLSLVRLTGDLIVW FT SDEMNPPQVIRTLLPLLLESSTESVAEISSNSLERILGPAESDEFLARVYEKLITGCYN FT ILANHADPNSGLDESILEECLQYLEKQLESSQARKAMEEFFSDSGELVQIMMATANENL FT SAKFCNRVLKFFTKLFQLTEKSPNPSLLHLCGSLAQLACVEPVRLQAWLTRMTTSPPKD FT SDQLDVIQENRQLLQLLTTYIVRENSQVGEGVCAVLLGTLTPMATEMLANGDGTGFPEL FT MVVMATLASAGQGAGHLQLHNAAVDWLSRCKKYLSQKNVVEKLNANVMHGKHVMILECT FT CHIMSYLADVTNALSQSNGQGPSHLSVDGEERAIEVDSDWVEELAVEEEDSQAEDSDED FT SLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKVCHKDHEISYAKYGSFFC FT DCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSEPRISESLVRHASTSSPADKAKVTIS FT DGKVADEEKPKKSSLCRTVEGCREELQNQANFSFAPLVLDMLNFLMDAIQTNFQQASAV FT GSSSRAQQALSELHTVEKAVEMTDQLMVPTLGSQEGAFENVRMNYSGDQGQTIRQLISA FT HVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQLSALLKQADSSKRKLTLTRLASAPV FT PFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGSVSDHLVLHPQLATGNFIIKAVWLP FT GSQTELAIVTADFVKIYDLCVDALSPTFYFLLPSSKIRDVTFLFNEEGKNIIVIMSSAG FT YIYTQLMEEASSAQQGPFYVTNVLEINHEDLKQDSNSQVAGGGVSVYYSHVLQMLFFSY FT CQGKSFAATISRTTLEVLQLFPINIKSSNGGSKTSPALCQWSEVMNHPGLVCCVQQTTG FT VPLVVMVKPDTFLIQEIKTLPAKAKIQDMVAIRHTACNEQQRTTMILLCEDGSLRIYMA FT NVENTSYWLQPSLQPSSVISIMKPVRKRKTATITTRTSSQVTFPIDFFEHNQQLTDVEF FT GGNDLLQVYNAQQIKHRLNSTGMYVANTKPGGFTIEISNNNSTMVMTGMRIQIGTQAIE FT RAPSYIEIFGRTMQLNLSRSRWFDFPFTREEALQADKKLNLFSESPTPGADSVLIVTAK FT LGATGLWLSNILGSLHSADFSVLSSGNFELHLMY" FT mRNA complement(join(19401004..19401390,19403234..19403396, FT 19404470..19404560,19407843..19408734)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-002" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:BE871607.1 Em:BF868725.1 FT Em:BF868728.1 Em:BG698859.1 Em:BI754105.1 Em:BU180981.1 FT Em:BX491909.1 Em:BX491922.1 Em:CB118441.1 Em:CB123128.1" FT /note="match: cDNAs: Em:AK026543.1" FT CDS complement(join(19401326..19401390,19403234..19403396, FT 19404470..19404560,19407843..19408300)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-002" FT /standard_name="OTTHUMP00000002586" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /protein_id="CAI19270.1" FT /translation="MGPGKKGRCREEGPGRGRRAWIIRGSGSSRQGWVGSVESSKRSAN FT VTRQRQIEQILPALAAGSCFHPAFILSCRFSSRTRATSREEKNLQGFLEQPKEKWVESA FT FEVDGPYYFTVLALHILPPEQWRATRVEILRRLLVTSQARAVAPGGATRLTDKAVKDYS FT AYRSSLLFWALVDLIYNMFKKVPTSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQE FT EFMPVETFSEFLDVAGLLSEITDPESFLKDLLNSVP" FT mRNA complement(join(19419227..19419412,19419807..19419934)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-015" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:N59506.1" FT mRNA complement(join(19420589..19420633,19421400..19421519, FT 19422039..19422416)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-010" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:AW379446.1 Em:BE148770.1" FT mRNA complement(join(19420495..19420633,19421400..19421519, FT 19422039..19422146,19423017..19423144,19423687..19423774, FT 19426090..19426171,19426572..19426620)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-011" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:BI760489.1 Em:BI763890.1" FT CDS complement(join(19401326..19401390,19403234..19403396, FT 19404470..19404560,19407843..19408067,19410998..19411192, FT 19412639..19412764,19413173..19413315,19414310..19414423, FT 19415253..19415471,19419313..19419412,19419807..19419980, FT 19420443..19420633,19421400..19421519,19422039..19422146, FT 19423017..19423144,19423687..19423774,19426091..19426171, FT 19426870..19427067,19428014..19428135,19430578..19430599)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-004" FT /standard_name="OTTHUMP00000002587" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /protein_id="CAI19271.1" FT /translation="MLEDMTTGTESETKAFMAVCIETAKRYNLDDYRTPVFIFERLCSI FT IYPEENEVTEFFVTLEKDPQQEDFLQGRMPGNPYSSNEPGIGPLMRDIKNKICQDCDLV FT ALLEDDSGMELLVNNKIISLDLPVAEVYKKVWCTTNEGEPMRIVYRMRGLLGDATEEFI FT ESLDSTTDEEEDEEEVYKMAGVMAQCGGLECMLNRLAGIRDFKQGRHLLTVLLKLFSYC FT VKVKVNRQQLVKLEMNTLNVMLGTLNLALVAEQESKDSGGAAVAEQVLSIMEIILDESN FT AEPLSEDKGNLLLTGDKDQLVMLLDQINSTFVRSNPSVLQGLLRIIPYLSFGEVEKMQI FT LVERFKPYCNFDKYDEDHSGDDKVFLDCFCKIAAGIKNNSNGHQLKDLILQKGITQNAL FT DYMKKHIPSAKNLDADIWKKFLSRPALPFILRLLRGLAIQHPGTQVLIGTDSIPNLHKL FT EQVSSDEGIGTLAENLLEALREHPDVNKKIDAARRETRAEKKRMAMAMRQKALGTLGMT FT TNEKGQVVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVALEEMEN FT KPRKQQGYSTVSHFNIVHYDCHLAAVRLARGREEWESAALQNANTKCNGLLPVWGPHVP FT ESAFATCLARHNTYLQECTGQREPTYQLNIHDIKLLFLRFAMEQSFSADTGGGGRESNI FT HLIPYIIHTVLYVLNTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHIL FT PPEQWRATRVEILRRLLVTSQARAVAPGGATRLTDKAVKDYSAYRSSLLFWALVDLIYN FT MFKKVPTSNTEGGWSCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGL FT LSEITDPESFLKDLLNSVP" FT mRNA complement(join(19401008..19401390,19403234..19403396, FT 19404470..19404560,19407843..19408067,19410998..19411192, FT 19412639..19412764,19413173..19413315,19414310..19414423, FT 19415253..19415471,19419313..19419412,19419807..19419980, FT 19420443..19420633,19421400..19421519,19422039..19422146, FT 19423017..19423144,19423687..19423774,19426091..19426171, FT 19426870..19427067,19428014..19428135,19430578..19430751, FT 19431079..19431410)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-004" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: cDNAs: Em:AK123857.1" FT mRNA complement(join(19433060..19433220,19433331..19433460, FT 19436590..19436717,19436874..19437052)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-016" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:BQ685394.1" FT mRNA complement(join(19436981..19437326,19439018..19439181)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-012" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:AL079806.1" FT mRNA complement(join(19401000..19401390,19403234..19403396, FT 19404470..19404560,19407843..19408067,19410998..19411192, FT 19412639..19412764,19413173..19413315,19414310..19414423, FT 19415253..19415471,19419313..19419412,19419807..19419980, FT 19420443..19420633,19421400..19421519,19422039..19422146, FT 19423017..19423144,19423687..19423774,19426091..19426171, FT 19426870..19427067,19428014..19428135,19430578..19430751, FT 19431079..19431160,19431542..19431683,19432227..19432336, FT 19433063..19433220,19433331..19433460,19436590..19436717, FT 19436874..19436958,19437236..19437326,19439018..19439361, FT 19440193..19440321,19440439..19440564,19441305..19441443, FT 19441892..19442131,19443715..19443908,19444317..19444404, FT 19445366..19445451,19446051..19446195,19446674..19446842, FT 19447683..19447928,19448428..19448506,19449327..19449554, FT 19451035..19451184,19452940..19453149,19454117..19454233, FT 19454705..19454812,19455472..19455568,19464501..19464675, FT 19465577..19465714,19467282..19467386,19467841..19468018, FT 19468141..19468271,19470474..19470585,19471280..19471401, FT 19472287..19472427,19473320..19473494,19474487..19474621, FT 19475057..19475120,19477071..19477287,19478137..19478353, FT 19478807..19478970,19479795..19479996,19480262..19480433, FT 19481412..19481569,19481935..19482162,19482765..19482917, FT AL357564.17:2304..2462,AL357564.17:3352..3534, FT AL357564.17:5648..5818,AL357564.17:6454..6684, FT AL357564.17:7126..7273,AL357564.17:7364..7434, FT AL357564.17:7957..8148,AL357564.17:9301..9364, FT AL357564.17:9790..9978,AL357564.17:10336..10534, FT AL357564.17:10786..10886,AL357564.17:11193..11294, FT AL357564.17:12559..12768,AL357564.17:13564..13721, FT AL357564.17:14972..15069,AL357564.17:16299..16420, FT AL357564.17:18401..18630,AL357564.17:18718..18843, FT AL357564.17:18976..19158,AL357564.17:19856..19984, FT AL357564.17:20491..20570,AL357564.17:22129..22264, FT AL357564.17:22998..23280,AL357564.17:24588..24757, FT AL357564.17:29348..29433,AL357564.17:29553..29712, FT AL357564.17:30636..30823,AL357564.17:32077..32194, FT AL357564.17:32701..32838,AL357564.17:32978..33077, FT AL357564.17:37725..37915,AL357564.17:38018..38077, FT AL357564.17:38970..39094,AL357564.17:42678..42802, FT AL357564.17:43207..43348,AL357564.17:43484..43586, FT AL357564.17:44078..44217,AL357564.17:44336..44465, FT AL357564.17:45188..45291,AL357564.17:47255..47352, FT AL357564.17:55610..55813)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-001" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:AA536151.1 Em:AA664290.1 FT Em:AA748129.1 Em:AA862983.1 Em:AI904000.1 Em:AL534215.2 FT Em:AL698241.1 Em:AL699867.1 Em:AL706913.1 Em:AL712628.1 FT Em:AU124139.1 Em:AU140665.1 Em:AU140745.1 Em:AW068172.1 FT Em:AW410145.1 Em:AW438832.1 Em:AW892182.1 Em:AW965641.1 FT Em:BB497599.2 Em:BB522052.2 Em:BB660855.1 Em:BB748731.1 FT Em:BE559885.1 Em:BE716089.1 Em:BE731858.1 Em:BE735158.1 FT Em:BE746986.1 Em:BE780361.1 Em:BE792345.1 Em:BE900847.1 FT Em:BF091698.1 Em:BF370325.1 Em:BF370332.1 Em:BF376283.1 FT Em:BF379244.1 Em:BF591733.1 Em:BF665525.1 Em:BF761560.1 FT Em:BF808452.1 Em:BF907203.1 Em:BG004552.1 Em:BG028492.1 FT Em:BG196014.1 Em:BG219429.1 Em:BG336655.1 Em:BG480120.1 FT Em:BG481691.1 Em:BG494973.1 Em:BG773983.1 Em:BG822154.1 FT Em:BI030840.1 Em:BI086961.1 Em:BI087877.1 Em:BI913289.1 FT Em:BI916606.1 Em:BM454370.1 Em:BM479739.1 Em:BM545187.1 FT Em:BM667618.1 Em:BM672765.1 Em:BM682147.1 Em:BM918083.1 FT Em:BM919293.1 Em:BQ022800.1 Em:BQ066509.1 Em:BQ069232.1 FT Em:BQ220630.1 Em:BQ276386.1 Em:BQ331909.1 Em:BQ433212.1 FT Em:BQ574710.1 Em:BQ718138.1 Em:BQ898787.1 Em:BQ924496.1 FT Em:BQ939682.1 Em:BQ943700.1 Em:BQ955434.1 Em:BU075117.1 FT Em:BU553108.1 Em:BU615209.1 Em:BU623583.1 Em:BU625663.1 FT Em:BU942911.1 Em:BX409772.1 Em:BX464571.1 Em:BX464572.1 FT Em:BX472441.1 Em:CA426972.1 Em:CA427747.1 Em:CA436627.1 FT Em:CD300412.1 Em:CD366815.1 Em:CD514217.1 Em:CD557264.1 FT Em:CD644049.1 Em:CD653437.1 Em:CD655019.1" FT /note="match: cDNAs: Em:AB007931.1 Em:AF055010.1 FT Em:AF348492.1 Em:AJ505016.1 Em:AK001233.1 Em:AK022573.1 FT Em:AK022924.1 Em:AK023826.1 Em:AK080556.1 Em:AK082231.1 FT Em:AL049972.1 Em:BC007962.1 Em:BC007962.2 Em:BC018694.1 FT Em:BC024440.1" FT CDS complement(join(19401326..19401390,19403234..19403396, FT 19404470..19404560,19407843..19408067,19410998..19411192, FT 19412639..19412764,19413173..19413315,19414310..19414423, FT 19415253..19415471,19419313..19419412,19419807..19419980, FT 19420443..19420633,19421400..19421519,19422039..19422146, FT 19423017..19423144,19423687..19423774,19426091..19426171, FT 19426870..19427067,19428014..19428135,19430578..19430751, FT 19431079..19431160,19431542..19431683,19432227..19432336, FT 19433063..19433220,19433331..19433460,19436590..19436717, FT 19436874..19436958,19437236..19437326,19439018..19439361, FT 19440193..19440321,19440439..19440564,19441305..19441443, FT 19441892..19442131,19443715..19443908,19444317..19444404, FT 19445366..19445451,19446051..19446195,19446674..19446842, FT 19447683..19447928,19448428..19448506,19449327..19449554, FT 19451035..19451184,19452940..19453149,19454117..19454233, FT 19454705..19454812,19455472..19455568,19464501..19464675, FT 19465577..19465714,19467282..19467386,19467841..19468018, FT 19468141..19468271,19470474..19470585,19471280..19471401, FT 19472287..19472427,19473320..19473494,19474487..19474621, FT 19475057..19475120,19477071..19477287,19478137..19478353, FT 19478807..19478970,19479795..19479996,19480262..19480433, FT 19481412..19481569,19481935..19482162,19482765..19482917, FT AL357564.17:2304..2462,AL357564.17:3352..3534, FT AL357564.17:5648..5818,AL357564.17:6454..6684, FT AL357564.17:7126..7273,AL357564.17:7364..7434, FT AL357564.17:7957..8148,AL357564.17:9301..9364, FT AL357564.17:9790..9978,AL357564.17:10336..10534, FT AL357564.17:10786..10886,AL357564.17:11193..11294, FT AL357564.17:12559..12768,AL357564.17:13564..13721, FT AL357564.17:14972..15069,AL357564.17:16299..16420, FT AL357564.17:18401..18630,AL357564.17:18718..18843, FT AL357564.17:18976..19158,AL357564.17:19856..19984, FT AL357564.17:20491..20570,AL357564.17:22129..22264, FT AL357564.17:22998..23280,AL357564.17:24588..24757, FT AL357564.17:29348..29433,AL357564.17:29553..29712, FT AL357564.17:30636..30823,AL357564.17:32077..32194, FT AL357564.17:32701..32838,AL357564.17:32978..33077, FT AL357564.17:37725..37915,AL357564.17:38018..38077, FT AL357564.17:38970..39094,AL357564.17:42678..42802, FT AL357564.17:43207..43348,AL357564.17:43484..43586, FT AL357564.17:44078..44217,AL357564.17:44336..44465, FT AL357564.17:45188..45291,AL357564.17:47255..47352, FT AL357564.17:55610..55785)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-001" FT /standard_name="OTTHUMP00000002585" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: proteins: Tr:Q8TDN5" FT /protein_id="CAI19272.1" FT /translation="MATSGGEEAAAAAPAPGTPATGADTTPGWEVAVRPLLSASYSAFE FT MKELPQLVASVIESESEILHHEKQYEPFYSSFVALSTHYITTVCSLIPRNQLQSVAAAC FT KVLIEFSLLRLENPDEACAVSQKHLILLIKGLCTGCSRLDRTEIITFTAMMKSAKLPQT FT VKTLSDVEDQKELASPVSPELRQKEVQMNFLNQLTSVFNPRTVASQPISTQTLVEGEND FT EQSSTDQASAIKTKNVFIAQNVASLQELGGSEKLLRVCLNLPYFLRYINRFQDAVLANS FT FFIMPATVADATAVRNGFHSLVIDVTMALDTLSLPVLEPLNPSRLQDVTVLSLSCLYAG FT VSVATCMAILHVGSAQQVRTGSTSSKEDDYESDAATIVQKCLEIYDMIGQAISSSRRAG FT GEHYQNFQLLGAWCLLNSLFLILNLSPTALADKGKEKDPLAALRVRDILSRTKEGVGSP FT KLGPGKGHQGFGVLSVILANHAIKLLTSLFQDLQVEALHKGWETDGPPAALSIMAQSTS FT IQRIQRLIDSVPLMNLLLTLLSTSYRKACVLQRQRKGSMSSDASASTDSNTYYEDDFSS FT TEEDSSQDDDSEPILGQWFEETISPSKEKAAPPPPPPPPPLESSPRVKSPSKQAPGEKG FT NILASRKDPELFLGLASNILNFITSSMLNSRNNFIRNYLSVSLSEHHMATLASIIKEVD FT KDGLKGSSDEEFAAALYHFNHSLVTSDLQSPNLQNTLLQQLGVAPFSEGPWPLYIHPQS FT LSVLSRLLLIWQHKASAQGDPDVPECLKVWDRFLSTMKQNALQGVVPSETEDLNVEHLQ FT MLLLIFHNFTETGRRAILSLFVQIIQELSVNMDAQMRFVPLILARLLLIFDYLLHQYSK FT APVYLFEQVQHNLLSPPFGWASGSQDSNSRRATTPLYHGFKEVEENWSKHFSSDAVPHP FT RFYCVLSPEASEDDLNRLDSVACDVLFSKLVKYDELYAALTALLAAGSQLDTVRRKENK FT NVTALEACALQYYFLILWRILGILPPSKTYINQLSMNSPEMSECDILHTLRWSSRLRIS FT SYVNWIKDHLIKQGMKAEHASSLLELASTTKCSSVKYDVEIVEEYFARQISSFCSIDCT FT TILQLHEIPSLQSIYTLDAAISKVQVSLDEHFSKMAAETDPHKSSEITKNLLPATLQLI FT DTYASFTRAYLLQNFNEEGTTEKPSKEKLQGFAAVLAIGSSRCKANTLGPTLVQNLPSS FT VQTVCESWNNINTNEFPNIGSWRNAFANDTIPSESYISAVQAAHLGTLCSQSLPLAASL FT KHTLLSLVRLTGDLIVWSDEMNPPQVIRTLLPLLLESSTESVAEISSNSLERILGPAES FT DEFLARVYEKLITGCYNILANHADPNSGLDESILEECLQYLEKQLESSQARKAMEEFFS FT DSGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLHLCGSLAQLACVEP FT VRLQAWLTRMTTSPPKDSDQLDVIQENRQLLQLLTTYIVRENSQVGEGVCAVLLGTLTP FT MATEMLANGDGTGFPELMVVMATLASAGQGAGHLQLHNAAVDWLSRCKKYLSQKNVVEK FT LNANVMHGKHVMILECTCHIMSYLADVTNALSQSNGQGPSHLSVDGEERAIEVDSDWVE FT ELAVEEEDSQAEDSDEDSLCNKLCTFTITQKEFMNQHWYHCHTCKMVDGVGVCTVCAKV FT CHKDHEISYAKYGSFFCDCGAKEDGSCLALVKRTPSSGMSSTMKESAFQSEPRISESLV FT RHASTSSPADKAKVTISDGKVADEEKPKKSSLCRTVEGCREELQNQANFSFAPLVLDML FT NFLMDAIQTNFQQASAVGSSSRAQQALSELHTVEKAVEMTDQLMVPTLGSQEGAFENVR FT MNYSGDQGQTIRQLISAHVLRRVAMCVLSSPHGRRQHLAVSHEKGKITVLQLSALLKQA FT DSSKRKLTLTRLASAPVPFTVLSLTGNPCKEDYLAVCGLKDCHVLTFSSSGSVSDHLVL FT HPQLATGNFIIKAVWLPGSQTELAIVTADFVKIYDLCVDALSPTFYFLLPSSKIRDVTF FT LFNEEGKNIIVIMSSAGYIYTQLMEEASSAQQGPFYVTNVLEINHEDLKDSNSQVAGGG FT VSVYYSHVLQMLFFSYCQGKSFAATISRTTLEVLQLFPINIKSSNGGSKTSPALCQWSE FT VMNHPGLVCCVQQTTGVPLVVMVKPDTFLIQEIKTLPAKAKIQDMVAIRHTACNEQQRT FT TMILLCEDGSLRIYMANVENTSYWLQPSLQPSSVISIMKPVRKRKTATITTRTSSQVTF FT PIDFFEHNQQLTDVEFGGNDLLQVYNAQQIKHRLNSTGMYVANTKPGGFTIEISNNNST FT MVMTGMRIQIGTQAIERAPSYIEIFGRTMQLNLSRSRWFDFPFTREEALQADKKLNLFI FT GASVDPAGVTMIDAVKIYGKTKEQFGWPDEPPEEFPSASVSNICPSNLNQSNGTGDSDS FT AAPTTTSGTVLERLVVSSLEALESCFAVGPIIEKERNKNAAQELATLLLSLPAPASVQQ FT QSKSLLASLHTSRSAYHSHKDQALLSKAVQCLNTSSKEGKDLDPEVFQRLVITARSIAI FT MRPNNLVHFTESKLPQMETEGMDEGKEPQKQLEGDCCSFITQLVNHFWKLHASKPKNAF FT LAPACLPGLTHIEATVNALVDIIHGYCTCELDCINTASKIYMQMLLCPDPAVSFSCKQA FT LIRVLRPRNKRRHVTLPSSPRSNTPMGDKDDDDDDDADEKMQSSGIPNGGHIRQESQEQ FT SEVDHGDFEMVSESMVLETAENVNNGNPSPLEALLAGAEGFPPMLDIPPDADDETMVEL FT AIALSLQQDQQGSSSSALGLQSLGLSGQAPSSSSLDAGTLSDTTASAPASDDEGSTAAT FT DGSTLRTSPADHGGSVGSESGGSAVDSVAGEHSVSGRSSAYGDATAEGHPAGPGSVSSS FT TGAISTTTGHQEGDGSEGEGEGETEGDVHTSNRLHMVRLMLLERLLQTLPQLRNVGGVR FT AIPYMQVILMLTTDLDGEDEKDKGALDNLLSQLIAELGMDKKDVSKKNERSALNEVHLV FT VMRLLSVFMSRTKSGSKSSICESSSLISSATAAALLSSGAVDYCLHVLKSLLEYWKSQQ FT NDEEPVATSQLLKPHTTSSPPDMSPFFLRQYVKGHAADVFEAYTQLLTEMVLRLPYQIK FT KITDTNSRIPPPVFDHSWFYFLSEYLMIQQTPFVRRQVRKLLLFICGSKEKYRQLRDLH FT TLDSHVRGIKKLLEEQGIFLRASVVTASSGSALQYDTLISLMEHLKACAEIAAQRTINW FT QKFCIKDDSVLYFLLQVSFLVDEGVSPVLLQLLSCALCGSKVLAALAASSGSSSASSSS FT APVAASSGQATTQSKSSTKKSKKEEKEKEKDGETSGSQEDQLCTALVNQLNKFADKETL FT IQFLRCFLLESNSSSVRWQAHCLTLHIYRNSSKSQQELLLDLMWSIWPELPAYGRKAAQ FT FVDLLGYFSLKTPQTEKKLKEYSQKAVEILRTQNHILTNHPNSNIYNTLSGLVEFDGYY FT LESDPCLVCNNPEVPFCYIKLSSIKVDTRYTTTQQVVKLIGSHTISKVTVKIGDLKRTK FT MVRTINLYYNNRTVQAIVELKNKPARWHKAKKVQLTPGQTEVKIDLPLPIVASNLMIEF FT ADFYENYQASTETLQCPRCSASVPANPGVCGNCGENVYQCHKCRSINYDEKDPFLCNAC FT GFCKYARFDFMLYAKPCCAVDPIENEEDRKKAVSNINTLLDKADRVYHQLMGHRPQLEN FT LLCKVNEAAPEKPQDDSGTAGGISSTSASVNRYILQLAQEYCGDCKNSFDELSKIIQKV FT FASRKELLEYDLQQREAATKSSRTSVQPTFTASQYRALSVLGCGHTSSTKCYGCASAVT FT EHCITLLRALATNPALRHILVSQGLIRELFDYNLRRGAAAMREEVRQLMCLLTRDNPEA FT TQQMNDLIIGKVSTALKGHWANPDLASSLQYEMLLLTDSISKEDSCWELRLRCALSLFL FT MAVNIKTPVVVENITLMCLRILQKLIKPPAPTSKKNKDVPVEALTTVKPYCNEIHAQAQ FT LWLKRDPKASYDAWKKCLPIRGIDGNGKAPSKSELRHLYLTEKYVWRWKQFLSRRGKRT FT SPLDLKLGHNNWLRQVLFTPATQAARQAACTIVEALATIPSRKQQVLDLLTSYLDELSI FT AGECAAEYLALYQKLITSAHWKVYLAARGVLPYVGNLITKEIARLLALEEATLSTDLQQ FT GYALKSLTGLLSSFVEVESIKRHFKSRLVGTVLNGYLCLRKLVVQRTKLIDETQDMLLE FT MLEDMTTGTESETKAFMAVCIETAKRYNLDDYRTPVFIFERLCSIIYPEENEVTEFFVT FT LEKDPQQEDFLQGRMPGNPYSSNEPGIGPLMRDIKNKICQDCDLVALLEDDSGMELLVN FT NKIISLDLPVAEVYKKVWCTTNEGEPMRIVYRMRGLLGDATEEFIESLDSTTDEEEDEE FT EVYKMAGVMAQCGGLECMLNRLAGIRDFKQGRHLLTVLLKLFSYCVKVKVNRQQLVKLE FT MNTLNVMLGTLNLALVAEQESKDSGGAAVAEQVLSIMEIILDESNAEPLSEDKGNLLLT FT GDKDQLVMLLDQINSTFVRSNPSVLQGLLRIIPYLSFGEVEKMQILVERFKPYCNFDKY FT DEDHSGDDKVFLDCFCKIAAGIKNNSNGHQLKDLILQKGITQNALDYMKKHIPSAKNLD FT ADIWKKFLSRPALPFILRLLRGLAIQHPGTQVLIGTDSIPNLHKLEQVSSDEGIGTLAE FT NLLEALREHPDVNKKIDAARRETRAEKKRMAMAMRQKALGTLGMTTNEKGQVVTKTALL FT KQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVALEEMENKPRKQQGYSTVSHF FT NIVHYDCHLAAVRLARGREEWESAALQNANTKCNGLLPVWGPHVPESAFATCLARHNTY FT LQECTGQREPTYQLNIHDIKLLFLRFAMEQSFSADTGGGGRESNIHLIPYIIHTVLYVL FT NTTRATSREEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRVEILR FT RLLVTSQARAVAPGGATRLTDKAVKDYSAYRSSLLFWALVDLIYNMFKKVPTSNTEGGW FT SCSLAEYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDPESFLKDL FT LNSVP" FT CDS complement(join(19440373..19440564,19441305..19441443, FT 19441892..19442131,19443715..19443782)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-005" FT /standard_name="OTTHUMP00000002588" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /protein_id="CAI19273.1" FT /translation="MVRTINLYYNNRTVQAIVELKNKPARWHKAKKVQLTPGQTEVKID FT LPLPIVASNLMIEFADFYENYQASTETLQCPRCSASVPANPGVCGNCGENVYQCHKCRS FT INYDEKDPFLCNACGFCKYARFDFMLYAKPCCAVDPIENEEDRKKAVSNINTLLDKADR FT VYHQLMGHRPQLENLLCKVNEAAPEKPQVVPRCKGHLDKGLGLDQKTAS" FT mRNA complement(join(19438134..19440564,19441305..19441443, FT 19441892..19442131,19443715..19443908,19444317..19445343)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-005" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:AI738964.1 Em:AU122040.1 FT Em:BF374101.1 Em:BG108311.1" FT /note="match: cDNAs: Em:AK022322.1" FT mRNA complement(join(19450971..19451184,19452097..19452193, FT 19452940..19453149,19454117..19454195)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-013" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:AA203407.1 Em:BF380250.1" FT misc_feature 19455641 FT /note="Clone_left_end: RP1-43E13" FT mRNA complement(join(19471346..19471401,19472287..19472622)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-014" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:BI015939.1 Em:BI017712.1" FT mRNA complement(join(<19447694..19447928,19448428..19448506, FT 19449327..19449554,19451035..19451184,19452940..19453149, FT 19454117..19454233,19454705..19454812,19455472..19455568, FT 19464501..19464675,19465577..19465714,19467841..19468018, FT 19468141..19468271,19470474..19470585,19471280..19471401, FT 19472287..19472427,19472517..19472600,19473320..19473494, FT 19474487..19474621,19475057..19475120,19477071..19477287, FT 19478137..>19478194)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-006" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:AL699241.1 Em:BF529325.1" FT /note="match: cDNAs: Em:AK000331.1" FT CDS complement(join(<19447694..19447928,19448428..19448506, FT 19449327..19449554,19451035..19451184,19452940..19453149, FT 19454117..19454233,19454705..19454812,19455472..19455568, FT 19464501..19464675,19465577..19465714,19467841..19468018, FT 19468141..19468271,19470474..19470585,19471280..19471401, FT 19472287..19472427,19472517..19472600,19473320..19473494, FT 19474487..19474621,19475057..19475120,19477071..19477287, FT 19478137..>19478194)) FT /codon_start=1 FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-006" FT /standard_name="OTTHUMP00000002589" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /protein_id="CAI19274.1" FT /translation="DFPFTREEALQADKKLNLFIGASVDPAGVTMIDAVKIYGKTKEQF FT GWPDEPPEEFPSASVSNICPSNLNQSNGTGDSDSAAPTTTSGTVLERLVVSSLEALESC FT FAVGPIIEKERNKNAAQELATLLLSLPAPASVQQQSKSLLASLHTSRSAYHSHKDQALL FT SKAVQCLNTSSKEGKDLDPEVFQRLVITARSIAIMRPNNLVHFTESKLPQMETDCFFPR FT CACWSLGIVGILIGAPLETPSPEGMDEGKEPQKQLEGDCCSFITQLVNHFWKLHASKPK FT NAFLAPACLPGLTHIEATVNALVDIIHGYCTCELDCINTASKIYMQMLLCPDPAVSFSC FT KQALIRVLRPRNKRRHVTLPSSPRSNTPMGDKDDDDDDDADEKMQSSGIPNGGHIRQES FT QEQSEVDHGDFEMVSESMVLETAENVNNGNPSPLEALLAGAEGFPPMLDIPPDADDETM FT VELAIALSLQQDQQAPASDDEGSTAATDGSTLRTSPADHGGSVGSESGGSAVDSVAGEH FT SVSGRSSAYGDATAEGHPAGPGSVSSSTGAISTTTGHQEGDGSEGEGEGETEGDVHTSN FT RLHMVRLMLLERLLQTLPQLRNVGGVRAIPYMQVILMLTTDLDGEDEKDKGALDNLLSQ FT LIAELGMDKKDVSKKNERSALNEVHLVVMRLLSVFMSRTKSGSKSSICESSSLISSATA FT AALLSSGAVDYCLHVLKSLLEYWKSQQNDEEPVATSQLLKPHTTSSPPDMSPFFLRQYV FT KGHAADVFEAYTQLLTEMVLRLPYQIKKITDTNSRIPPPVFDHSWFYFLSEYLMIQQTP FT FVRRQVRKLLLFICGSKEKYRQLRDLHTLDSHVRGIKKLLEEQGIFLRASVVTASSGSA FT LQYDTLISLMEHLKACAEIAAQRTINWQKFCIKDDSVLYFLLQVSFLVDEGVSPVLLQL FT LSCALCGSKVLAALAASSGSSSASSSSAPVAASSGQATTQSKSSTKKSKKEEKE" FT misc_feature 19480957 FT /note="Clone_right_end: RP5-1126H10" FT mRNA complement(join(19480333..19480393,19481412..19481533)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-017" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: ESTs: Em:BF887532.1" FT misc_feature 19482958..19544641 FT /note="annotated region of clone" FT mRNA complement(join(AL137127.7:<63582..63803, FT AL137127.7:64303..64381,AL137127.7:65202..65429, FT AL137127.7:66910..67059,AL137127.7:68815..69024, FT AL137127.7:69992..70108,AL137127.7:70580..70687, FT AL137127.7:71347..71443,AL137127.7:80376..80550, FT AL137127.7:81452..81589,AL137127.7:83716..83893, FT AL137127.7:84016..84146,AL137127.7:86349..86460, FT AL137127.7:87155..87276,AL137127.7:88162..88302, FT AL137127.7:89195..89369,AL137127.7:90362..90496, FT AL137127.7:90932..90995,AL137127.7:92132..92164, FT AL137127.7:92946..93162,AL137127.7:94012..94228, FT AL137127.7:94682..94845,AL137127.7:95670..95871, FT AL137127.7:96137..96308,AL137127.7:97287..97444, FT AL137127.7:97810..98037,AL137127.7:98640..98792, FT 19483261..19483419,19484309..19484491,19486605..19486775, FT 19487411..19487641,19488083..19488230,19488321..19488391, FT 19488914..19489105,19490258..19490321,19490747..19490935, FT 19491293..19491491,19491743..19491843,19492150..19492251, FT 19493516..19493725,19494521..>19494549)) FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-007" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /note="match: cDNAs: Em:AB093242.2" FT CDS complement(join(AL137127.7:<63582..63803, FT AL137127.7:64303..64381,AL137127.7:65202..65429, FT AL137127.7:66910..67059,AL137127.7:68815..69024, FT AL137127.7:69992..70108,AL137127.7:70580..70687, FT AL137127.7:71347..71443,AL137127.7:80376..80550, FT AL137127.7:81452..81589,AL137127.7:83716..83893, FT AL137127.7:84016..84146,AL137127.7:86349..86460, FT AL137127.7:87155..87276,AL137127.7:88162..88302, FT AL137127.7:89195..89369,AL137127.7:90362..90496, FT AL137127.7:90932..90995,AL137127.7:92132..92164, FT AL137127.7:92946..93162,AL137127.7:94012..94228, FT AL137127.7:94682..94845,AL137127.7:95670..95871, FT AL137127.7:96137..96308,AL137127.7:97287..97444, FT AL137127.7:97810..98037,AL137127.7:98640..98792, FT 19483261..19483419,19484309..19484491,19486605..19486775, FT 19487411..19487641,19488083..19488230,19488321..19488391, FT 19488914..19489105,19490258..19490321,19490747..19490935, FT 19491293..19491491,19491743..19491843,19492150..19492251, FT 19493516..19493725,19494521..>19494549)) FT /codon_start=1 FT /gene="UBR4" FT /locus_tag="RP5-1126H10.1-007" FT /standard_name="OTTHUMP00000002590" FT /product="ubiquitin protein ligase E3 component n-recognin FT 4" FT /protein_id="CAI20972.1" FT /translation="LVRLTGDLIVWSDEMNPPQVIRTLLPLLLESSTESVAEISSNSLE FT RILGPAESDEFLARVYEKLITGCYNILANHADPNSGLDESILEECLQYLEKQLESSQAR FT KAMEEFFSDSGELVQIMMATANENLSAKFCNRVLKFFTKLFQLTEKSPNPSLLHLCGSL FT AQLACVEPVRLQAWLTRMTTSPPKDSDQLDVIQENRQLLQLLTTYIVRENSQVGEGVCA FT VLLGTLTPMATE