ID BX248353; SV 1; circular; genomic DNA; CON; PRO; 2488635 BP. XX AC BX248353; XX PR Project:PRJNA87; XX DT 07-NOV-2003 (Rel. 77, Created) DT 13-MAY-2009 (Rel. 100, Last updated, Version 5) XX DE Corynebacterium diphtheriae NCTC 13129, complete genome XX KW complete genome. XX OS Corynebacterium diphtheriae NCTC 13129 OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Corynebacterineae; Corynebacteriaceae; Corynebacterium. XX RN [1] RP 1-2488635 RX DOI; 10.1093/nar/gkg874. RX PUBMED; 14602910. RA Cerdeno-Tarraga A.M., Efstratiou A., Dover L.G., Holden M.T.G., Pallen M., RA Bentley S.D., Besra G.S., Churcher C., James K.D., De Zoysa A., RA Chillingworth T., Cronin A., Dowd L., Feltwell T., Hamlin N., Holroyd S., RA Jagels K., Moule S., Quail M.A., Rabbinowitsch E., Rutherford K., RA Thomson N.R., Unwin L., Whitehead S., Barrell B.G.Parkhill.J.; RT "The complete genome sequence and analysis of Corynebacterium diphtheriae RT NCTC13129"; RL Nucleic Acids Res. 31(22):6516-6523(2003). XX RN [2] RP 1-2488635 RA Cerdeno-Tarraga A.M.; RT ; RL Submitted (03-OCT-2003) to the INSDC. RL Cerdeno-Tarraga A.M., submitted on behalf of the Pathogen Sequencing Unit, RL Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA RL E-mail: amct@sanger.ac.uk XX DR ENA; ERS000051. DR GR; BX248353_GR. XX CO join(BX248354.1:1..348517,BX248355.1:51..341553,BX248356.1:51..347625, CO BX248357.1:51..349535,BX248358.1:51..348408,BX248359.1:51..349895, CO BX248360.1:51..349659,BX248361.1:51..53793) XX FH Key Location/Qualifiers FH FT source 1..2488635 FT /organism="Corynebacterium diphtheriae NCTC 13129" FT /strain="NCTC 13129" FT /mol_type="genomic DNA" FT /note="biotype gravis" FT /db_xref="taxon:257309" FT CDS 19..1677 FT /transl_table=11 FT /gene="dnaA" FT /locus_tag="DIP0001" FT /product="chromosomal replication initiator protein" FT /note="Similar to Mycobacterium tuberculosis chromosomal FT replication initiator protein DnaA or Rv0001 or MT0001 or FT MTV029.01 SW:DNAA_MYCTU (P49993) (507 aa) fasta scores: FT E(): 6.4e-73, 49.1% id in 556 aa" FT /protein_id="CAE48512.1" FT /translation="MWNETWNEITNELIQLSREPESEIPRITAEQRAYLKLVRPAAFVE FT GIAVLRVPHSRAKETIETHLGQAITSVLSRRMGRPFTVAVTVDPTLDVIQDLPHDVPEQ FT HIVQHHVPEHPHYSPVSQGYPPHYAPEQSEYNTEYSDEYPSGWATYHVQTPQPSQSSQS FT AQQQPAQRMPDRRRYAEQQQVPQRSEEPVMGQRRAREKPAHDPDRNGSLNPRYTFDTYV FT VSDSNKLPWSAAWAVAEKPARAYNPLFIWGDSGLGKTHLMHAIGNYAQELDPKLKVKYV FT SSEEFTNDYINSVRDDRQEAFKRRYRDLDILMVDDIQFLQGKEGTQEEFFHTFNALQQA FT DKQIVLSSDRPPKQLTTLEDRLRTRFQSGLIADIYPPDLETRIAILLNKASAEGITADR FT DVLELIASRFNASIRELEGAFIRVSAYASLNEAPINMATAQEALRDMMPEQADIEITAG FT MIMSVTAEYFHIDVDTLKGSGKSRSVAHPRQLAMYLCRELTDLSLPKIGEHFGGKDHTT FT VMYAYRKIGKEITEKRDTYDEIQQLTQQIKSSDRA" FT misc_feature 652..1593 FT /note="HMMPfam hit to PF00308, Bacterial dnaA protein" FT misc_feature 748..1134 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 751..813 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 772..795 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 847..891 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 943..987 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 1045..1128 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT misc_feature 1534..1593 FT /note="FPrintScan hit to PR00051, Bacterial chromosomal FT replication initiator (DNAA) signature" FT /note="ScanRegExp hit to PS01008, DnaA protein signature." FT CDS 2286..3503 FT /transl_table=11 FT /gene="dnaN" FT /locus_tag="DIP0002" FT /product="DNA polymerase III, beta chain" FT /EC_number="2.7.7.7" FT /note="Similar to Mycobacterium smegmatis DNA polymerase FT III, beta chain DnaN SW:DP3B_MYCSM (P52851) (397 aa) fasta FT scores: E(): 1.3e-76, 50.51% id in 390 aa" FT /protein_id="CAE48513.1" FT /translation="MINHIEEPSSMDAHAVSFRVEKDDLSGAVSWVARNLPTKPTQPVL FT RAVVITADDEGLEFAGFDYEVSTKVHINADVRQPGRIAVAGKLMSDIIGTLPNKTIEVF FT VEGTQVQVVCGSSRFELPLIPLDEYPPLPQLPAVTGAIDPNLFTDAVLQVAAAAGRDET FT LPMLTGIHMEIDGENVTLTATDRFRLALRRFTWSPANPEAKAKLLIPAKNLSDNARSLD FT SGSTEPVEIAVGTGENIGAEGLFGIHIDNRQTTTRMLDADFPNVSPLLPKVHNAMASVE FT ISALSDAIRRVALVAERNAQIRMQFTRDEVILSAGGSDAGHAEESVPCAFTGDQEFLIA FT FNSAYLRDGLSVIRTSRVVFGFTEPSRPAIMIPEPETLPEASADGTYPTPDTEFTYLLM FT PVRLPG" FT misc_feature 2331..2684 FT /note="HMMPfam hit to PF00712, DNA polymerase III beta FT subunit, N-terminal domain" FT misc_feature 2379..3443 FT /note="HMMSmart hit to SM00480, DNA polymerase III beta FT catalytic subunit" FT misc_feature 2706..3080 FT /note="HMMPfam hit to PF02767, DNA polymerase III beta FT subunit, central domain" FT misc_feature 3084..3395 FT /note="HMMPfam hit to PF02768, DNA polymerase III beta FT subunit, C-terminal domain" FT CDS 3542..4735 FT /transl_table=11 FT /gene="recF" FT /locus_tag="DIP0003" FT /product="DNA replication and repair protein" FT /note="Similar to Mycobacterium smegmatis DNA replication FT and repair protein RecF SW:RECF_MYCSM (P50916) (384 aa) FT fasta scores: E(): 1.1e-75, 55.38% id in 390 aa" FT /protein_id="CAE48514.1" FT /translation="MYIRELSLRDFRSWPECTVTLEPGVTLFVGRNGFGKTNIVEAIGY FT VAHLGSHRVFHDSALVRQGKESARVSVTAVNHGRELTAHLLIKAKGANQAQINRTRLKS FT PRELLGVVKTVLFSPEDLSLVRGDPAERRRYLDHVIATRKPRLGGVKADYDKVLRQRNS FT LLKTAGAALRRGYGADDGALSTLDVWDSQLARLGGQLIHARHSVVRELGPLVHDAYARI FT APESRPAHIRYVSTVPFADVVELPSPEEFEAAMLAELGQCRDKEIDRGVSLVGPHRDDL FT DVVLGDYPAKGFASHGETWSMCLSLRLAEFHLLRNDGTDPVLILDDVFAELDTQRREKL FT VSVTAEAEQVLITAAVGDDLPDTLTESAVHRHFVSVADTPEGRISLLDAATGVPHDG" FT misc_feature 3548..3670 FT /note="HMMPfam hit to PF00470, RecF protein" FT misc_feature 3629..3652 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 3890..3952 FT /note="ScanRegExp hit to PS00617, RecF protein signature FT 1." FT misc_feature 4505..4561 FT /note="ScanRegExp hit to PS00618, RecF protein signature FT 2." FT CDS 4725..5276 FT /transl_table=11 FT /locus_tag="DIP0004" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium paratuberculosis FT hypothetical 17.5 kDa protein TR:Q9L7L4 (EMBL:AF222789) FT (166 aa) fasta scores: E(): 5.6e-18, 45.45% id in 143 aa" FT /protein_id="CAE48515.1" FT /translation="MTDNDAVSAAFAHMRQEAKKRTGTVPNLNRPLPKASKSLADNDAT FT PAVPKQRGMATGPDGRRRRRSYSVQRAGSILSDEIKKRGWRKEIAGGWVNSHWDDLVGA FT QIAAHTKVEMFKDKALFITCDSTAWATNLRMMQRIILRSISEQIGPDIIVELKIFGPKA FT PSWRHGPLHVKGRGPRDTYG" FT CDS 5379..7436 FT /transl_table=11 FT /gene="gyrB" FT /locus_tag="DIP0005" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /note="Similar to Mycobacterium smegmatis DNA gyrase FT subunit B GyrB SW:GYRB_MYCSM (P48355) (675 aa) fasta FT scores: E(): 1.6e-127, 71.93% id in 684 aa" FT /protein_id="CAE48516.1" FT /translation="MHASVATAEHEYGASSITILEGLEAVRKRPGMYIGSTGERGLHHL FT VWEVVDNSVDEAMAGYATHVDVTLLADGGVEVVDNGRGIPVEMHPSGAPTVQVVMTQLH FT AGGKFDSDSYAVSGGLHGVGISVVNALSTRVEADIKRDGKHWLQNFSMAIPDPLVEGGN FT ARGTGTTIRFWPDAEIFETTTFKFETISRRLQEMAFLNKGLTITLVDKRVTDEELELEA FT IAEEGDTAENVSLDQIDVDADGNIDAPAAPKKREKKKVFFYPDGLKDYVAHLNKSKQVI FT HPTIISFDAKGNDHEVEVAMQWNNSYSQSVHTFANTINTFEGGTHEEGFRAALTSLMNR FT YAREHKLLKEKEANLTGDDCREGLSAVISVRVGDPQFEGQTKTKLGNTEVKGFVQRMVN FT EHIADWLDANPAEAKTIINKAVSSAHARVAARKARDLVRRKSATDLGGLPGKLADCRSK FT DPEKSELYIVEGDSAGGSAKAGRDSLYQAILPLRGKILNVEKARLDKVLKNAEVQAIIT FT ALGTGIHDEFDIKKLRYHKIVLMADADVDGSHIATLLLTLLFRFMPQLIEEGHVYLAQP FT PLYKLKWGKGEPGFAYSDAERDTLLAEGLAQNRKINKDDGIQRYKGLGEMNASELWETT FT LDPKYRVLRRVDITDAQRADEIFSILMGDDVSARRSFITRRAKDVRFLDI" FT misc_feature 5412..5444 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 5487..5915 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature 5499..5546 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 5499..7412 FT /note="HMMSmart hit to SM00433, TopoisomeraseII" FT misc_feature 5604..5645 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 5730..5774 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 5928..5975 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 5928..6602 FT /note="HMMPfam hit to PF00204, DNA topoisomerase II FT (N-terminal region)" FT misc_feature 5973..6014 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6237..6293 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6315..6356 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 6447..6497 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6591..6635 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6633..6695 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6771..6815 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 6777..6803 FT /note="ScanRegExp hit to PS00177, DNA topoisomerase II FT signature." FT misc_feature 6855..7100 FT /note="HMMPfam hit to PF01751, Toprim domain" FT misc_feature 6921..6950 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 6951..7172 FT /note="BlastProDom hit to PD000616, PD000616" FT misc_feature 6969..7019 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7023..7076 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7083..7121 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7200..7400 FT /note="HMMPfam hit to PF00986, DNA gyrase B subunit, FT carboxyl terminus" FT misc_feature 7203..7397 FT /note="BlastProDom hit to PD149633, PD149633" FT misc_feature 7227..7277 FT /note="FPrintScan hit to PR00418, DNA topoisomerase II FT family signature" FT misc_feature 7290..7328 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT misc_feature 7338..7388 FT /note="FPrintScan hit to PR01159, DNA gyrase subunit B FT signature" FT CDS complement(7503..7940) FT /transl_table=11 FT /locus_tag="DIP0006" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48517.1" FT /translation="MSTLAQLLDTKRTALAAELAGFIDRSVSQSSGISGVALKGAVAAA FT KKVRPDIVTKGAERLLPEVVEVLDPYWASFEASDSTHFGEFLEQHKSEVSDKILEVADR FT NAEKVDMPALKKAYGSLRGKAASFIEPNLPGLGQIMQNYMK" FT CDS complement(8201..8473) FT /transl_table=11 FT /locus_tag="DIP0007" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48518.1" FT /translation="MRGLTPEQTLMLADAFCAQTSGDLSVRDYAALNAIAAVTTAHIHA FT VVVFPTAHHMVKYVRSLVIQLSPLDDRNTDFADFLVAVLRDLNGL" FT CDS complement(8478..8681) FT /transl_table=11 FT /locus_tag="DIP0008" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 7.1 FT kDa protein SC10A5.13 TR:O54104 (EMBL:AL021529) (64 aa) FT fasta scores: E(): 0.18, 52.5% id in 40 aa" FT /protein_id="CAE48519.1" FT /translation="MAMTLRLTAEHDRALALLAQAQGCSKQEAATRAIIAAAARMLADE FT EVRTLARQHLPHYAATEHRLGR" FT CDS 8792..11362 FT /transl_table=11 FT /gene="gyrA" FT /locus_tag="DIP0009" FT /product="DNA gyrase subunit A" FT /EC_number="5.99.1.3" FT /note="Similar to Mycobacterium smegmatis DNA gyrase FT subunit A GyrA SW:GYRA_MYCSM (P48354) (842 aa) fasta FT scores: E(): 0, 73.35% id in 837 aa" FT /protein_id="CAE48520.1" FT /translation="MSDDLLGGDGYDRVHPIDLNEEMETSYIDYAMSVIVGRALPEVRD FT GLKPVHRRILYAMYDSGYRPDRSYVKSARPVSDTMGQFHPHGDSAIYDTLVRLAQDWNM FT RYPMVDGQGNFGSRGNDGPAAMRYTECRLTPLAMEMVRDIRENTVDFSPNYDGKTQEPD FT VLPSRVPNLLMNGSNGIAVGMATNIPPHNLRELGDAIFWLLDNPEADEASALEACMKYV FT KGPDFPTAGQIVGSQGINDAYTTGRGSIRMRGVTSIEEEGNRQIIVITELPYQVNPDNM FT ISNIAEQVRDGKLAGISKIEDESSDRVGMRIVVTLKRDAVPRVVLNNLYKHSQLQTNFG FT ANMLSIVDGVPRTLRLDQMLRHYVTHQIEVIVRRTQYRLDEAEKRAHILRGLVKALDML FT DEVIALIRRSPTVDIARTGLMELLTVDEIQADAILAMQLRRLAALERQKIVDELAEIEL FT EIADYKDILARPERQRAIVRDELAEIVDKYGDDRRTQIIAATGDVTEEDLIARENVVVT FT ITSTGYAKRTKVDAYKSQRRGGKGVRGAELKQDDVVRHFFVSSTHDWILFFTNFGRVYR FT LKAYELPEASRTARGQHVANLLEFQPEERIAQVIQIQSYEDAPYLVLATAQGRVKKSRL FT SDYESNRSGGLIAINLNEGDKLIGAALCDNDDDLLLVSEEGQSIRFNANDDQLRPMGRA FT TAGVKGMRFKGDDQLLAMTVVKPDAFLLVATSGGYGKRTSLDEYSPQGRGGQGVLTFKY FT TPKRGKLIAAVVVDEDDEILAITSAGGVIRTVVNQIRPSSRATMGVRLVNLEDGVELLA FT IDRNVEGEGEEAAEAVATGAVDGPAERGKQTEVDLGIDNADEEA" FT misc_feature 8840..10213 FT /note="HMMSmart hit to SM00434, DNA Topoisomerase IV" FT misc_feature 8903..10258 FT /note="HMMPfam hit to PF00521, DNA gyrase/topoisomerase IV, FT subunit A" FT misc_feature 9671..9757 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 11362..11706 FT /transl_table=11 FT /locus_tag="DIP0010" FT /product="Putative membrane protein" FT /note="Similar in its C-terminal region to Mycobacterium FT leprae hypothetical 32.2 kDa protein MLB1770.07 or ML0007 FT TR:O32870 (EMBL:Z70722) (303 aa) fasta scores: E(): FT 9.9e-08, 36.28% id in 113 aa" FT /protein_id="CAE48521.1" FT /translation="MATRDVIITRVAPGSAFKTALSLSLIGLISWLICVVILYFGMQAV FT GIWDKINQVIGGVGGDQIVSFGLIISLAALLGTIVAIIATVLAPLTALAYNAFVDLFGG FT VEVTMREELD" FT misc_feature order(11419..11487,11557..11625) FT /note="2 probable transmembrane helices predicted for FT DIP0010 by TMHMM2.0" FT tRNA 11818..11891 FT /gene="tRNA-Ile" FT /product="transfer RNA-Ile" FT /anticodon=(pos:11852..11854,aa:Ile) FT /note="tRNA Ile anticodon GAT, Cove score 85.68" FT tRNA 11904..11976 FT /gene="tRNA-Ala" FT /product="transfer RNA-Ala" FT /anticodon=(pos:11937..11939,aa:Ala) FT /note="tRNA Ala anticodon TGC, Cove score 75.96" FT CDS complement(12176..12904) FT /transl_table=11 FT /locus_tag="DIP0011" FT /product="Putative regulatory protein" FT /note="Similar to Escherichia coli glc operon FT transcriptional activator GlcC or B2980 SW:GLCC_ECOLI FT (P52072) (254 aa) fasta scores: E(): 1.2e-05, 23.5% id in FT 234 aa" FT /protein_id="CAE48522.1" FT /translation="MHMSQSTQRAYQEVLDWLEKELRKGSIAIGDKLPGERALAEQFEL FT SRASVREAIRILTSMGLVRTGTGSGPHSGAIVISEPSAGLSWAIRMHLSARSLPLKDLV FT NTCILIESNAAADAATPKISPDSPERSHVLNEAHRLLDSMDDPTLPFHDYHIKDVNFHI FT LITSLAGNLVTETIMESLRYSAIAFVIERLAMRTDWAEVSEKLQREHRNILRAIEERNP FT DKARTLVHDHIADFYELTSH" FT misc_feature complement(12686..12865) FT /note="HMMSmart hit to SM00345, helix_turn_helix gluconate FT operon transcriptional repressor, DNA-binding" FT misc_feature complement(12695..12865) FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family" FT misc_feature complement(12716..12766) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT misc_feature complement(12734..12808) FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT misc_feature complement(12740..12805) FT /note="Predicted helix-turn-helix motif with score 1020 FT (+2.66 SD) at aa 34-55, sequence PGERALAEQFELSRASVREAIR" FT misc_feature complement(12764..12808) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT CDS complement(12992..14662) FT /transl_table=11 FT /gene="lldP" FT /gene_synonym="lctP" FT /locus_tag="DIP0012" FT /product="L-lactate permease" FT /note="Similar to Escherichia coli L-lactate permease LldP FT or LctP or B3603 SW:LLDP_ECOLI (P33231) (551 aa) fasta FT scores: E(): 2.4e-68, 40.1% id in 561 aa" FT /protein_id="CAE48523.1" FT /translation="MDTFTANVSAVGGSTTASAIVALLPLITFFVMLLVVKAKAYVSGL FT TALAVAIIVAIAAFHMPWNFALLSATQGAAFGLFPIVWIVVLALWFYQVTVASGRFQDM FT RAIFDTVGGGDLRIQTILIAFCFGGLLEALAGFGAPVAITATMIMALGLKPLKTATVVL FT IANTAPVAFGAVAIPITTAGTLTGLDSAHIGAVVGHQAPFFAALVPFIIVLIIDGVRGL FT RETWPAALTIGLSFAISQWWSATYFSYELTDVVASLVGLIAAVLLLQVWKPKGLDAVRE FT RLGVEKHEAAGRLTLSRTWMAVFPYVLVVAIFGVAKLWTLGIDIPKALAATDVKIPWPG FT LHGHILNSSGEAIKSTTYNFQWLSSPGTLLLITGIIVAIVYSIFDDKGRYQLPLGRAAM FT ELGLCFYRMRFSALTIVSVLSLAYVMNFSGQTLAIGTAVASLGAAFAFFSPVLGWVGTA FT VTGSDTSANALFSNLQKTAAENIGLDPHLMTAANTSGGVVGKMISPQSLAIAASSVGME FT GKESQIFRSVIWWSIGLLVVLCTMVFLQSNVLAWMLPTP" FT misc_feature complement(order(13016..13081,13301..13366,13382..13447, FT 13511..13576,13694..13759,13850..13900,13931..13987, FT 14009..14074,14120..14185,14249..14314,14375..14440, FT 14462..14527,14558..14623)) FT /note="13 probable transmembrane helices predicted for FT DIP0012 by TMHMM2.0" FT misc_feature complement(13028..14614) FT /note="HMMPfam hit to PF02652, L-lactate permease" FT misc_feature complement(13082..13144) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(13526..13585) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(13862..13939) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(13997..14059) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(14549..14662) FT /note="Signal peptide predicted for DIP0012 by SignalP 2.0 FT HMM (Signal peptide probability 0.962) with cleavage site FT probability 0.479 between residues 38 and 39" FT CDS 15159..15632 FT /transl_table=11 FT /locus_tag="DIP0013" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48524.1" FT /translation="MGAAMGPALAVDAAQEAPTADNSPAVEAPQTPEEGEQSAQTSQDN FT PRYESQIVRAGHSAEAEQVGDVSEDTIFEYSEFDIPEGWFVSVDEDSGKVTVSTPPDAQ FT DGDNYTVKVKAVDLDGNVTWSEVTFTVGDPETDNPEIEPLDADAPEVELPAAE" FT CDS 15721..17364 FT /transl_table=11 FT /locus_tag="DIP0014" FT /product="Putative membrane protein" FT /note="Low similarity to Staphylococcus aureus subsp aureus FT N315 SA0639 protein TR:Q99VT7 (EMBL:AP003131) (543 aa) FT fasta scores: E(): 3e-23, 25.56% id in 485 aa" FT /protein_id="CAE48525.1" FT /translation="MIMVRLGVLCMVHGLTSTHMKVRQSKVGGRARWALILSVVLTWFS FT VIGMCMAIIGAGRIIDGGGVSRWIIAGPFVVMVSFALRGWVLAGGQVAEERRVRRQLVE FT RVFQAGEIRTSKFPTGAVVGLATESAEKMMAFRVGFMSQIVASLTSPLLVLVAMGWSSR FT WWLAAVVAAMLPIVPLVVGGFRKMVVRVSHGSQDARKALAADYMDALRALGTLQLLGAS FT ARVAQRLAARGEDNRVAVMQLLRGNQLILFAIDAVFSLAIVAVSAGLALFQVRQGVLTP FT GQGITVIALSILLLEPMDHIGAFFYVGMAGWGAQRGIHGFITSLPTGHAHVPSAQPGCI FT TMHDVSFSHGDSVVLSHAQLEIQRGQRVAIVGRSGAGKTTLLSLIAGMKTPQAGAITRG FT GDCAVVAQHTWLFQGTIADNLRLARPEATEEEMWQALSSAQLADEIRTMPAGLSTLIGE FT FGVGLSGGQAQRLSLARALISGRRIVLFDEPTAHVDLASEAKILDAINNLGRDYTVVMV FT THRDTSLAHMDRIVRVTNGRIEEEEHQHAH" FT misc_feature 15811..16614 FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature order(15817..15885,15913..15981,16132..16200,16210..16269, FT 16465..16533,16576..16644) FT /note="6 probable transmembrane helices predicted for FT DIP0014 by TMHMM2.0" FT misc_feature 16810..17331 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 16813..17328 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 16819..16896 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 16834..16857 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 17107..17151 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 17107..17319 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 17354..19000 FT /transl_table=11 FT /locus_tag="DIP0015" FT /product="Putative transport system, ATP-binding protein" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 probable transport ATP-binding protein MsbA or FT B0914 or Z1260 or ECS0997 SWALL:MSBA_ECOLI (SWALL:P27299) FT (582 aa) fasta scores: E(): 7e-30, 26.73% id in 561 aa, and FT to Pasteurella multocida hypothetical protein PM1473 FT TR:Q9CKX8 (EMBL:AE006183) (552 aa) fasta scores: E(): FT 6.1e-33, 27.97% id in 554 aa" FT /protein_id="CAE48526.1" FT /translation="MRTEPTPWHLIRWLLGITRPVLRPLGASTLCRIINQILGIFLYVI FT PAYSLVAGVGSVSSVVAIMVVIALLKALLRYAEHYLGHLVAFKALELIRIRVFRDIYPQ FT APAIMRRTGPDAVGSGDMLTRLTRDIGQIEVFFAHTTAPVISAAVVPLGVVITIFMLSP FT VHGLIAAVIFGVAVVVSLDNSAYRFAIRVSEHRGNITQHITDSVGGVAEIVGYDAQQRR FT QHELRDREEPLQTAVRRRGGIVGTRLGVVAAARICVLTMLLPTTDNMALAVVCMFAVLR FT CWDMINEVADLGNHFSNSLAAARRVWSLAHAGLALNDGPQPLPTATTGATVEWDNVTFT FT YPAETTPALRNVCLTVPAGSWGAILGATGSGKSTLAALLLRYWDPTTGAIRVDGHDIRT FT CPLEQLRSTVSIVTQDITLLNTTVADNLRLAQPNATDAELIDALTVACLDRELTLDTAV FT GEQGANLSGGQRQRLSLAQALLRHGRVLILDEFTAHLNPALAANIRSRLREACPHTTII FT EITHDLTYLDSYQWVAAIDSGSLIDAAQYSR" FT misc_feature 17405..18280 FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature order(17414..17482,17495..17563,17756..17824,17837..17896, FT 18080..18148) FT /note="5 probable transmembrane helices predicted for FT DIP0015 by TMHMM2.0" FT misc_feature 18425..18961 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 18428..18967 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 18449..18472 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 18746..18790 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 18746..18958 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT tRNA 19068..19141 FT /gene="tRNA-Ile" FT /product="transfer RNA-Ile" FT /anticodon=(pos:19102..19104,aa:Ile) FT /note="tRNA Ile anticodon GAT, Cove score 85.68" FT tRNA 19154..19226 FT /gene="tRNA-Ala" FT /product="transfer RNA-Ala" FT /anticodon=(pos:19187..19189,aa:Ala) FT /note="tRNA Ala anticodon TGC, Cove score 75.96" FT CDS <19447..19767 FT /transl_table=11 FT /locus_tag="DIP0016" FT /product="Putative membrane protein" FT /note="No database matches. Possible membrane protein" FT /protein_id="CAE48527.1" FT /translation="RNHRWANGRVGADSRNDRFSVVAGVDPAVGRIPMVALVAVMMKAV FT ISTFDLQSVHPRAQLVIVDLSDADRGDSIVRALIVSTTSAVGFNLVGLGAARLGQHLRD FT LP" FT misc_feature order(19504..19572,19666..19734) FT /note="2 probable transmembrane helices predicted for FT DIP0016 by TMHMM2.0" FT CDS 19865..20029 FT /transl_table=11 FT /locus_tag="DIP0017" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48528.1" FT /translation="MRGHRTRLRFAEPEGCHEAFAGHLGKNNSCRRHRDHAYRELADFG FT VKRRANAQG" FT tRNA 20221..20293 FT /gene="tRNA-Ala" FT /product="transfer RNA-Ala" FT /anticodon=(pos:20254..20256,aa:Ala) FT /note="tRNA Ala anticodon TGC, Cove score 75.96" FT CDS 20524..20721 FT /transl_table=11 FT /locus_tag="DIP0018" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48529.1" FT /translation="MEFGAYGVVATEALWVARQCEQDARCSDCFVAANNRSNAGNVVIA FT YECLWDKGVRPFNVALDALV" FT CDS complement(20713..20958) FT /transl_table=11 FT /locus_tag="DIP0019" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48530.1" FT /translation="MIRPRRYGVASRRSLFRRLGILARSAPPSPHYSPHAFIFDEVIHG FT DYAQIVADNSMDSVTQYELWKAICSSLKDENFFELD" FT CDS complement(20955..21185) FT /transl_table=11 FT /locus_tag="DIP0020" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48531.1" FT /translation="MNPITHSDTRAWDPTTIMWQVYPLGFAGVPVREPVDPAPRLGTAE FT DWQSLVAACDERGIAVILNSVFSHVADVMRY" FT CDS 21381..22379 FT /transl_table=11 FT /locus_tag="DIP0021" FT /product="Putative solute-binding lipoprotein" FT /note="Similar to Streptomyces coelicolor probable FT solute-binding lipoprotein SC8F11.05 TR:Q9KZH3 FT (EMBL:AL353864) (340 aa) fasta scores: E(): 2.8e-63, 54.98% FT id in 331 aa" FT /protein_id="CAE48532.1" FT /translation="MKSIKKTLKAAAAAVAALVTVTACSATGGAPRASDNPNGQAGGVD FT TPRYTVAMITHGAPGDTFWDLVRKGAEDAARKNNIELRYSSDPEAPNQANLVQNAIDSR FT VDGIAVTLPNADAIGPVARKAADKKIPIVALNAGMDAYQKYNISAFFGQEEKVAGTLAG FT ERLAKDGARHALCVIHEQGNSSQEARCAGVKQGMGGNVETLYVNGKDLTSVQSTVQAKL FT SQDKSIDWVMGLQAPVAMTSAEAVKNAGSAAKVATFDTNAQLVDAISSGAIAWAVDQQP FT YMQGYLAVDSIWLAHRNGSTMGGGRPVYTGPSFVDSSNVDAISEAAKAGLR" FT misc_feature 21381..21476 FT /note="Signal peptide predicted for DIP0021 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.512 between residues 32 and 33" FT misc_feature 21522..22349 FT /note="HMMPfam hit to PF00532, Periplasmic binding proteins FT and sugar binding domain of the LacI family." FT CDS 22376..23407 FT /transl_table=11 FT /locus_tag="DIP0022" FT /product="Putative ABC transport protein, membrane FT component" FT /note="Similar to Streptomyces coelicolor probable ABC FT transport protein, membrane component SC8F11.06 TR:Q9KZH2 FT (EMBL:AL353864) (359 aa) fasta scores: E(): 1.1e-72, 57.66% FT id in 326 aa" FT /protein_id="CAE48533.1" FT /translation="MSSVSADDRLRRRTGFSALIRRPELASLLGAIAIFVLFMVLAPSF FT RSLESFSTVLYASSTIGIVAVAVGMLMIGAEFDLSSGVAVTSTALAATMLNYNLHLNSW FT VGAGISLVFALGIGAWNGFLVTRTGIDSFLITLAGFLGLQGLNLAITKWVTGQVATPII FT SDMEGFGSARVVFAGTIHVGSVSIRATVLWWIFFVVIGSWLLFKTRFGNWIFAVGGDAD FT AARASGVPVDRVKIILFMFVGFAAWFVGMHNLFAFDSIQAGQGVGNEFLYIIAAVIGGC FT AMTGGRGTIIGTAIGAVIFGMTNQGIVYAGWNPDWFKFFLGAMLLFAVLTNTSFASLTK FT GRR" FT misc_feature 22376..22546 FT /note="Signal peptide predicted for DIP0022 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.810 between residues 57 and 58" FT misc_feature order(22448..22507,22526..22594,22682..22750,22769..22828, FT 22925..22993,23075..23143,23171..23224,23243..23311, FT 23321..23389) FT /note="9 probable transmembrane helices predicted for FT DIP0022 by TMHMM2.0" FT misc_feature 22526..23383 FT /note="ProfileScan hit to PS50281, Binding-system dependent FT bacterial transporters (araH, livH/limM families);" FT CDS 23408..24169 FT /transl_table=11 FT /locus_tag="DIP0023" FT /product="Putative ABC transport protein, ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor probable ABC FT transport protein, ATP-binding component SC8F11.07 FT TR:Q9KZH1 (EMBL:AL353864) (330 aa) fasta scores: E(): FT 2.8e-51, 62.15% id in 251 aa" FT /protein_id="CAE48534.1" FT /translation="MSEIIALRDVTKSYGSFDALRGVSLSISAGEVLCVLGDNGAGKST FT LIKILSGIHKPTSGEMLIDATPTVFNGPRDALNQGIATVHQNLAVVGHMSVWRNFFLGQ FT ELTGFLGRLREDEMRRITQEQLAAMGIDLPDVDVEVESLSGGQRQVVAIARAVYFGARV FT IILDEPTAALGVKQSGMVLRFVAAAREKGIGVVLITHNPHHAYLVGDHFTILNLGNQIL FT DADRSNVTLEELTQHMAGGGELEALSHELRR" FT misc_feature 23492..24091 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 23495..24061 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 23501..23578 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 23516..23539 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 23834..23878 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 23834..24049 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS complement(24217..24825) FT /transl_table=11 FT /locus_tag="DIP0024" FT /product="Putative membrane protein" FT /note="Possible membrane protein. No database matches" FT /protein_id="CAE48535.1" FT /translation="MNPTTIRGAVVLTKAAYNKYADYRDRKASEAYDALLSAADTAEDV FT RDSAVENVTSLAGQARKRLDAALADAQNTAESTKKDVAKTSKKLSKKARKKARKQAQKA FT GLTKKKRSAGAQAVRCSLYTVVLAALGAAAYFLWDKFSGSGVSDEPPRVEDFGADTVNT FT EESRLVYSTQTPEEGIPERDEELLNSLEEQLKNSEKNDD" FT misc_feature complement(24412..24477) FT /note="1 probable transmembrane helix predicted for DIP0024 FT by TMHMM2.0" FT misc_feature complement(24496..24591) FT /note="ProfileScan hit to PS50318, Lysine-rich region." FT CDS 24888..25430 FT /transl_table=11 FT /gene="ppiA" FT /locus_tag="DIP0025" FT /product="probable peptidyl-prolyl cis-trans isomerase A" FT /EC_number="5.2.1.8" FT /note="Similar to Mycobacterium tuberculosis probable FT peptidyl-prolyl cis-trans isomerase A PpiA or Rv0009 or FT MT0011 or MTCY10H4.08 SW:PPIA_MYCTU (P71578) (182 aa) fasta FT scores: E(): 4.7e-52, 78.36% id in 171 aa" FT /protein_id="CAE48536.1" FT /translation="MLMMNGMTLKTATAILHTNRGDVSIELFGNHAPKTVENFVTLANG FT TAEYKTENASGTNEGPFYDGAVFHRVIDGFMIQGGDPTGTGRGGPGYMFADEFHPELQF FT DRPFLLAMANAGPGTNGSQFFITVVPTPHLNNHHTIFGEVTDAASQKVVLDIAQTATDR FT MDRPVEPVVIESVEITE" FT misc_feature 24915..25421 FT /note="ProfileScan hit to PS50072, Cyclophilin-type FT peptidyl-prolyl cis-trans isomerase profile." FT misc_feature 24948..25427 FT /note="HMMPfam hit to PF00160, Cyclophilin type FT peptidyl-prolyl cis-trans isomerase" FT misc_feature 24966..25013 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25089..25127 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25191..25223 FT /note="ScanRegExp hit to PS00284, Serpins signature." FT misc_feature 25209..25256 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25254..25292 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT misc_feature 25293..25340 FT /note="FPrintScan hit to PR00153, Cyclophilin FT peptidyl-prolyl cis-trans isomerase signature" FT CDS complement(25519..>25752) FT /transl_table=11 FT /locus_tag="DIP0026" FT /product="Putative transposase (partial)" FT /note="Similar to Streptococcus mutans transposase FT (fragment) TR:Q9ZHF4 (EMBL:AF065413) (75 aa) fasta scores: FT E(): 3.5e-11, 47.22% id in 72 aa" FT /protein_id="CAE48537.1" FT /translation="VQSMSREVNCYDNAVMENFFGHLETKMYYGEHFASVDEFYWAVDD FT YIFWYNNDRLQQRFKGLTPMQYRDQTLKALTT" FT misc_feature complement(25546..25728) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS 25877..26494 FT /transl_table=11 FT /locus_tag="DIP0027" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis putative FT transmembrane protein Rv0110 or MTV031.04 TR:O53632 FT (EMBL:AL021926) (249 aa) fasta scores: E(): 1.4e-13, 34.19% FT id in 193 aa" FT /protein_id="CAE48538.1" FT /translation="MVHTEVMNALKRAYGQAPATAVLCALTILIYLLTVVESRSIEHNL FT SDSWIADHWTLYGPYSHGLGWLRMVGTVFLHSGPTHLALNMFMLFFFGREIEHYLGSGR FT FTLAYIVSGIGASATVLLMDPLAPTVGASGAVYGLMAIFVAMSYRLRRDLTAPLILIAV FT NVGYSLLMDGVSLWGHLGGLLTGCVLGIVLVIAQTTRGNKRG" FT misc_feature order(25913..25981,26084..26152,26171..26239,26249..26317, FT 26336..26389,26402..26461) FT /note="6 probable transmembrane helices predicted for FT DIP0027 by TMHMM2.0" FT misc_feature 26054..26470 FT /note="HMMPfam hit to PF01694, Rhomboid family" FT CDS complement(26672..27025) FT /transl_table=11 FT /locus_tag="DIP0028" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48539.1" FT /translation="MEEIVELHGWKLSPDFIHTLWIKLCTSSPPADLFEILWENSRSHT FT SNTQLFDHHSVNNTHVIIHIVDNCCGIFFTRSALCSQTKSCEILVDNYKNLGITQNSCA FT LYPTKNWGVGPPQ" FT CDS 27567..29366 FT /transl_table=11 FT /gene="thiC" FT /locus_tag="DIP0029" FT /product="thiamine biosynthesis protein" FT /note="Similar to Escherichia coli thiamine biosynthesis FT protein ThiC or B3994 SW:THIC_ECOLI (P30136) (631 aa) fasta FT scores: E(): 1.6e-132, 64.01% id in 603 aa" FT /protein_id="CAE48540.1" FT /translation="MSAASANSVTNPSAWENSEIHPKHSYSPIVSGDLEVPETEIQLDD FT SPTGPNDPVRIYRTRGPECDPTVGLKPLRAQWIDSREDTEEYAGRERNLADDGRSAQRR FT GAASLEWKGVKPTPRRAKQGKRVTQMHYARQGIITKEMEFVALREHMDPEFVRSEIARG FT RAIIPNNINHPESEPMIIGRKFLTKINANIGNSAVTSSIEEEVSKLRWATRWGADTVMD FT LSTGDDIHTTREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTVIEQCEQGVD FT YMTIHAGVLLAYIPLTTKRITGIVSRGGSIMAGWCLAHHKESFLYEHFDELCEIFAQYD FT VAFSLGDGLRPGSVADANDAAQFAELKTIGELARRAWEYDVQVMIEGPGHVPLNMVQEN FT NELEQKWAHDAPFYTLGPLVTDIAPGYDHITSAIGAAHIAMGGTAMLCYVTPKEHLGLP FT NRDDVKTGVITYKLAAHAADVAKGHPGARAWDDAMSKARFEFRWHDQFALSLDPDTAIA FT YHDETLPAEPAKTAHFCSMCGPKFCSMRISQDIRDMFADKIADLGIPQVGGDAEAGMAA FT KSEEFVAQGSQLYSEVRDNAAHA" FT misc_feature 27945..29219 FT /note="BlastProDom hit to PD007048, PD007048" FT misc_feature 27948..29219 FT /note="HMMPfam hit to PF01964, ThiC family" FT CDS 29350..30018 FT /transl_table=11 FT /gene="thiE" FT /locus_tag="DIP0030" FT /product="Putative thiamin-phosphate pyrophosphorylase" FT /note="Similar to Campylobacter jejuni thiamin-phosphate FT pyrophosphorylase ThiE or CJ1081 TR:Q9PNL3 (EMBL:AL139077) FT (210 aa) fasta scores: E(): 3.8e-14, 34.67% id in 199 aa" FT /protein_id="CAE48541.1" FT /translation="MLPTPRWGRDFDPRCYFVTGTGSVDHIVDVARQAARAGAGLIQVR FT SKPIAARDLYILGREVARAVAEVNPRTRVLIDDRVDVALALMNNGEHIHGVHVGQDDLP FT VRHVRALLGDNAIIGLTTGTLELVRASRQVAEVIDYIGAGPFRPTPTKDSGRAPVGLAG FT YPPLVAESLVPVVAIGDVRPEDAADLAATGVAGVAIVRALMNSQGVATDVKLVLKGFAQ FT " FT misc_feature 29383..30012 FT /note="HMMPfam hit to PF02581, Thiamine monophosphate FT synthase/TENI" FT CDS 30015..31103 FT /transl_table=11 FT /gene="thiO" FT /locus_tag="DIP0031" FT /product="Putative thiamine biosynthesis oxidoreductase" FT /note="Similar to Rhizobium etli putative thiamine FT biosynthesis oxidoreductase ThiO SW:THIO_RHIET (O34292) FT (327 aa) fasta scores: E(): 5.4e-09, 31.67% id in 341 aa" FT /protein_id="CAE48542.1" FT /translation="MKIAVVGGGIVGLSTAFELSSRGHSVHVFDPNPASGASHFAGGML FT APAAEVQFQQDPLFPLMKRAGKLWPDMVRRVAQRTNLPTGYRTEGTLVVAADRADAEHL FT KQLRATQEAAGMDVRPITTRQARGLEPALGPRLSAAVHIPNDTQVAPRVFLTALLDALD FT DCGVGVIKEKITDLEPLYQQFDVVVLAAGLGAQHLSPIPLALRPVRGDILRVQTEPGAV FT NMVVRGWVNDRPIYIIPRANGEIAIGATSREDERDLPSVEGIYDLLRDAIRVVPGIVDS FT SLIEANVGVRPGTPDDLPYLGWASDRLIISTGYFRHGILLSALGAHVTACLIDGTDPGI FT DLTACAPDRHHNERGTTHGHLH" FT misc_feature 30015..31022 FT /note="HMMPfam hit to PF01266, FAD dependent FT oxidoreductase" FT misc_feature 30021..30107 FT /note="ProfileScan hit to PS50205, NAD binding site." FT CDS 31087..31287 FT /transl_table=11 FT /locus_tag="DIP0032" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 6.6 FT kDa protein SC6E10.02 TR:Q9S2N5 (EMBL:AL109661) (66 aa) FT fasta scores: E(): 1.1e-06, 36.36% id in 66 aa" FT /protein_id="CAE48543.1" FT /translation="MDIYINDIPTAIESPQLTDIISNHCNGIRRGIAVAINQRVIPRSQ FT WDTTTVTAGDHLDILTAVQGG" FT CDS 31289..32074 FT /transl_table=11 FT /gene="thiG" FT /locus_tag="DIP0033" FT /product="thiazole biosynthesis protein" FT /note="Similar to Escherichia coli thiazole biosynthesis FT protein ThiG or B3991 SW:THIG_ECOLI (P30139) (256 aa) fasta FT scores: E(): 1.5e-36, 45.85% id in 253 aa, and to FT Streptomyces coelicolor thiazole biosynthesis protein ThiG FT or SC6E10.03 SW:THIG_STRCO (Q9S2N4) (264 aa) fasta scores: FT E(): 9.9e-58, 65.21% id in 253 aa" FT /protein_id="CAE48545.1" FT /translation="MLTIADRSFQSHLIMGTGGASSFDTLEKSLIASGTELTTVAMRRH FT AAHTGAHGESVFELMQRLNITPLPNTAGCRTARDAILTAQLAREALDTSWIKVEVIADD FT TTLLPDVLELIDATETLTNDGFTVLAYTSDDPVVAQRLEDAGAAAVMPLGSPIGTGLGI FT LNPHNIELICSRATVPVLLDAGIGTASDATLAMELGCSGVLLASAINRCINPITMATAM FT KHAVEAGRLAREAGRIPRREHAVASSSFEGLASWADEVL" FT misc_feature 31814..31921 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 32071..33084 FT /transl_table=11 FT /locus_tag="DIP0034" FT /product="Putative adenylyltransferase" FT /note="Similar to Escherichia coli adenylyltransferase ThiF FT or B3992 SW:THIF_ECOLI (P30138) (251 aa) fasta scores: E(): FT 1.1e-21, 35.86% id in 237 aa" FT /protein_id="CAE48547.1" FT /translation="MMLDELERQRVARQLRLPGFGIEQQERLNNGRVLVIGAGGLGSPA FT LQSLAAAGVGSIRLVDNDTVDVSNIQRQILFGVGDVGRSKVHVAAERLRAIQPGIRIDA FT RTERLTAHNAHELAEGCDVILDGSDTFATKFLCGDLAEITGIPLVWGSVLQFEGHMGVF FT TREVGLRDLFPEAPTQGLNCADAGVLGATTAVIANLMATETIKILAGIGTVQPGAVTTY FT NALTSTFRTYTVGRDPLRSAARTLYTWTLPNEYELIDVREPHEIEHTPSGAHITLPQSM FT WNDTTAIQHALDNITTDNVVVVCASGIRSAAFIEQFAHLNPHLTFHNVPSGINELP" FT misc_feature 32137..32565 FT /note="ProfileScan hit to PS50204, UBA/THIF-type NAD FT binding fold." FT misc_feature 32155..32565 FT /note="HMMPfam hit to PF00899, ThiF family" FT misc_feature 32164..32232 FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT misc_feature 32167..32256 FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature 32755..32802 FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT CDS 33081..33899 FT /transl_table=11 FT /gene="thiD" FT /locus_tag="DIP0035" FT /product="phosphomethylpyrimidine kinase" FT /EC_number="2.7.4.7" FT /note="Similar to Escherichia coli phosphomethylpyrimidine FT kinase ThiD or B2103 SW:THID_ECOLI (P76422) (266 aa) fasta FT scores: E(): 5.5e-30, 44.9% id in 265 aa" FT /protein_id="CAE48548.1" FT /translation="MTPHILTIAGSDPSGGAGIQADLKSIMAAGGYGMAAITALTAQNT FT CGVTAIHTPPTEFLSEQLRAISDDITIHAIKIGMIGSSDAATAIATWLDQLHHTSIVVL FT DPVMVATSGSVLGQRHYFEPLLHHATVITPNLPELAVLANNHGPEQAEHAARSLAEQYD FT CAVLLKGGHRHGTDDLGNTWITASGPQFHAPSPRIHTTDTHGTGCSLSSALATRLAIEP FT PEPALHWATTWLNGAIAHGSDLNVGHGNGPVDHSYQLREYSANCNTINAP" FT repeat_region complement(33865..34120) FT /note="repX" FT CDS 34478..37732 FT /transl_table=11 FT /locus_tag="DIP0036" FT /product="Conserved hypothetical protein" FT /note="Similar in its N-terminal region to Pasteurella FT multocida hypothetical protein PM1127 TR:Q9CLT2 FT (EMBL:AE006153) (1056 aa) fasta scores: E(): 1.4e-15, FT 21.94% id in 802 aa" FT /protein_id="CAE48549.1" FT /translation="MKYHVGIDVGTFSVGLAAIEVDDAGMPIKTLSLVSHIHDSGLDPD FT EIKSAVTRLASSGIARRTRRLYRRKRRRLQQLDKFIQRQGWPVIELEDYSDPLYPWKVR FT AELAASYIADEKERGEKLSVALRHIARHRGWRNPYAKVSSLYLPDGPSDAFKAIREEIK FT RASGQPVPETATVGQMVTLCELGTLKLRGEGGVLSARLQQSDYAREIQEICRMQEIGQE FT LYRKIIDVVFAAESPKGSASSRVGKDPLQPGKNRALKASDAFQRYRIAALIGNLRVRVD FT GEKRILSVEEKNLVFDHLVNLTPKKEPEWVTIAEILGIDRGQLIGTATMTDDGERAGAR FT PPTHDTNRSIVNSRIAPLVDWWKTASALEQHAMVKALSNAEVDDFDSPEGAKVQAFFAD FT LDDDVHAKLDSLHLPVGRAAYSEDTLVRLTRRMLSDGVDLYTARLQEFGIEPSWTPPTP FT RIGEPVGNPAVDRVLKTVSRWLESATKTWGAPERVIIEHVREGFVTEKRAREMDGDMRR FT RAARNAKLFQEMQEKLNVQGKPSRADLWRYQSVQRQNCQCAYCGSPITFSNSEMDHIVP FT RAGQGSTNTRENLVAVCHRCNQSKGNTPFAIWAKNTSIEGVSVKEAVERTRHWVTDTGM FT RSTDFKKFTKAVVERFQRATMDEEIDARSMESVAWMANELRSRVAQHFASHGTTVRVYR FT GSLTAEARRASGISGKLKFFDGVGKSRLDRRHHAIDAAVIAFTSDYVAETLAVRSNLKQ FT SQAHRQEAPQWREFTGKDAEHRAAWRVWCQKMEKLSALLTEDLRDDRVVVMSNVRLRLG FT NGSAHKETIGKLSKVKLSSQLSVSDIDKASSEALWCALTREPGFDPKEGLPANPERHIR FT VNGTHVYAGDNIGLFPVSAGSIALRGGYAELGSSFHHARVYKITSGKKPAFAMLRVYTI FT DLLPYRNQDLFSVELKPQTMSMRQAEKKLRDALATGNAEYLGWLVVDDELVVDTSKIAT FT DQVKAVEAELGTIRRWRVDGFFSPSKLRLRPLQMSKEGIKKESAPELSKIIDRPGWLPA FT VNKLFSDGNVTVVRRDSLGRVRLESTAHLPVTWKVQ" FT misc_feature 36107..36271 FT /note="HMMSmart hit to SM00507, HNH nucleases" FT misc_feature 36140..36289 FT /note="HMMPfam hit to PF01844, HNH endonuclease" FT misc_feature 36464..36529 FT /note="Predicted helix-turn-helix motif with score 1063 FT (+2.81 SD) at aa 663-684, sequence RSMESVAWMANELRSRVAQHFA" FT CDS 37736..38650 FT /transl_table=11 FT /locus_tag="DIP0037" FT /product="Conserved hypothetical protein" FT /note="Similar to Neisseria meningitidis hypothetical FT protein NMA0630 TR:Q9JVY0 (EMBL:AL162753) (304 aa) fasta FT scores: E(): 2.7e-22, 37.5% id in 256 aa, and to FT Pasteurella multocida hypothetical protein PM1126 TR:Q9CLT3 FT (EMBL:AE006153) (343 aa) fasta scores: E(): 3.5e-22, 32.04% FT id in 284 aa" FT /protein_id="CAE48550.1" FT /translation="MNPGWRVVDLIDFDGKVSYQRGQLAITSDSGELRATLPLAQIAVV FT LIGNKLIISGAVLVKLSEYDIAVLVCDWRRVPVAGSFSWNEHTRIAARQRAQASLSLPR FT QKSAWAQIIKAKILGQARTAAQLGFDATDLKNLARAVRSGDVDNREAMAAKRYWEIISA FT EDDFRRLPGLAATGWNGALDYAYTVLRGHGMRAICSAGLVGTLGVFHHGRGNQFALVDD FT LIEPFRPAIDYAVFSIVSNSQELDKETKRQLVAAVEEPFNSAGQSIPTVFTAFAQQYGR FT YVEGDVEKLVPPIWEGPFDAEER" FT CDS 38634..38963 FT /transl_table=11 FT /locus_tag="DIP0038" FT /product="Conserved hypothetical protein" FT /note="Similar to Pasteurella multocida hypothetical FT protein PM1125 TR:Q9CLT4 (EMBL:AE006153) (108 aa) fasta FT scores: E(): 9.3e-07, 42.85% id in 77 aa" FT /protein_id="CAE48551.1" FT /translation="MPKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQL FT SVYVQYLPLAAKLSNLVKLIKEKLPPGGDVRILSVSDIQWSKMIRFSSSAEVSGEEKPD FT QLAIF" FT stem_loop 38961..39021 FT /note="Score 76: 28/30 (93%) matches, 0 gaps" FT CDS complement(38967..39077) FT /transl_table=11 FT /locus_tag="DIP0039" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48552.1" FT /translation="MELFLSVEPHWGSVLKNPDRLQVAQKILFNMVFWAT" FT CDS complement(39311..39592) FT /transl_table=11 FT /locus_tag="DIP0040" FT /product="Conserved hypothetical protein" FT /note="Similar to the C-terminal region of Rickettsia FT prowazekii hypothetical protein RP756 SW:Y756_RICPR FT (Q9ZCI4) (105 aa) fasta scores: E(): 3.4, 33.33% id in 51 FT aa" FT /protein_id="CAE48553.1" FT /translation="MPILALSAGSRLATVAILTYLLMRNGIPHTNHQTRSFSKTLINFS FT YGSSPLARAGVQFSKTLIDFQQHLARLAPNWGSVLKNPDRLRKKFSNC" FT repeat_region 39500..39512 FT /note="Possible inverted repeat" FT CDS join(39682..39792,39824..40033,40039..40134,40136..40459, FT 40471..40704) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0041" FT /product="Putative transposase for insertion sequence FT element (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium diphtheriae FT probable transposase for insertion sequence element FT SW:TRA_CORDI (P35879) (343 aa) fasta scores: E(): 6e-75, FT 61.11% id in 342 aa. Note: Also similar to DIP2026 to FT DIP2029 also a pseudogene (274 aa). Presents frameshifts at FT positions: 37, 107, 139 and 247" FT misc_feature 39836..39991 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 40133..40408 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 40396..40572 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT repeat_region 40714..40726 FT /note="Possible inverted repeat" FT CDS complement(40822..40923) FT /transl_table=11 FT /locus_tag="DIP0046" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48555.1" FT /translation="MILTVSAEISYVSATLAQTPAMRLFFDSVPFIL" FT CDS complement(join(41066..42397,42420..42614)) FT /transl_table=11 FT /locus_tag="DIP0047" FT /product="Putative transposase (pseudogene)" FT /note="Similar to Mycobacterium smegmatis putative FT transposase TR:O70063 (EMBL:AF036759) (503 aa) fasta FT scores: E(): 4.7e-88, 50% id in 498 aa. Presents a FT frameshift at residue 65" FT /protein_id="CAE48556.1" FT /translation="MNMSPSIRRVPTASGATAVQIIWRYRNRKPDIEHVGSAHTDYDLA FT ALMAKAQRLIDGEQISLDLKVSGTGTVDNPVTVSGERAGLLLDAIRGAFQLLGLDAASG FT EDEVFFNLVQARIISLGSKFDSIETLAEVGVTSASYATIKRYLPRYADKDFRDQITHAL FT ATHAAIGPGVMVLYDVTTLYFETDVPDELRKPGFSKERRLEPQITVGMLTDSIGFPLAI FT GAFEGNRAETQTMLPMILRLKDAYHLDDITIVADAGMFSAANKTAIIDAGLDYILGTKE FT REIPEPIKAWLDTVEGRSYTDYDDGHIWTHRHHSDRRRTSGTPQAVTYYQYSYDRARRT FT RRGIGEQLDKAQRAVDGKIPVKRNRYVNLKAPNKQVNHALANKHLTLAGIKGYETSRTD FT LKPQEVIGAYRRLFKIEKSFRMAKSDLKARPIYHRKEDSIHAHLTIVMAAMATGHVLEE FT ASGLSLKRLVRTLKKYRTFTVEIAGQTLHAQTDLPADIRELAEKLPQPSD" FT misc_feature complement(41237..42079) FT /note="HMMPfam hit to PF01609, Transposase (IS4 family)" FT CDS <42736..42969 FT /transl_table=11 FT /locus_tag="DIP0049" FT /product="Putative transposase (partial)" FT /note="Similar to Corynebacterium jeikeium transposase B FT TnpB TR:AAK67710 (EMBL:AY036070) (302 aa) fasta scores: FT E(): 1.2e-06, 45.45% id in 55 aa, and to Escherichia coli FT O157:H7 EDL933 partial transposase Z1207 TR:AAG55352 FT (EMBL:AE005276) (82 aa) fasta scores: E(): 5.2e-05, 38% id FT in 50 aa" FT /protein_id="CAE48557.1" FT /translation="MTMLWLRMSMVPHKNELIYTYTWVDVVDVEIAAFEWVNWWNESRL FT HQSLGYRTPAEVEAEFWEHHPSREIIEIKANA" FT misc_feature 42775..42912 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS 43101..43196 FT /transl_table=11 FT /locus_tag="DIP0050" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48558.1" FT /translation="MGFTMSAKAKTFAKNGLLLAVPVLEVNGDYA" FT CDS 43189..43284 FT /transl_table=11 FT /locus_tag="DIP0051" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48559.1" FT /translation="MHRACLFHCDVMDNLRAEGKRCVYVVHKKND" FT CDS complement(43308..43577) FT /transl_table=11 FT /locus_tag="DIP0052" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 10.4 kDa protein Rv0011c or MT0014 or MTCY10H4.11C FT SW:Y011_MYCTU (P71581) (93 aa) fasta scores: E(): 1.5e-09, FT 41.48% id in 94 aa" FT /protein_id="CAE48560.1" FT /translation="MPKSKINHSSTAYTAGSTANRTPVKINSTGTPLWYKIIMFGLILA FT GLLWLIVNYLAGQDISFMTELGPWNYGIGFGLFIIGLLMTMGWR" FT misc_feature complement(order(43314..43379,43410..43475)) FT /note="2 probable transmembrane helices predicted for FT DIP0052 by TMHMM2.0" FT CDS complement(43694..45715) FT /transl_table=11 FT /gene="pknB" FT /locus_tag="DIP0053" FT /product="probable serine/threonine-protein kinase" FT /EC_number="2.7.1.-" FT /note="Similar to Mycobacterium leprae probable FT serine/threonine-protein kinase PknB or ML0016 FT SW:PKNB_MYCLE (P54744) (622 aa) fasta scores: E(): 5.7e-58, FT 43.26% id in 661 aa" FT /protein_id="CAE48561.1" FT /translation="MTDIVLADRYRLGDVIGTGGMSEVYEATDVLLGRKVAVKMLRADL FT ARDVNFRERFRREAQNSGKLNHPAIVAVYDTGETPRAGLNTPYIVMELVNGRTLRDIVR FT EDGPLTPSQAAHTLIPVCHALQVSHDAGIIHRDIKPANVMITNTGAVKIMDFGIARALD FT DATSAMTQTSAVIGTAQYLSPEQARGKLADARSDVYALGCVLYETLTGKPPFEGETPFA FT VAYQHVQEDPVKPSEYIADLSPTAAINVDAVVLTAMAKHPGDRYQTAQEMCADLERLGR FT NAVTDAARHYVTPTSFATQDPASTTVVPVTQVTELDHAEAGAGIGAGVVPAGAVAGSAA FT VAGSGGAHAAPRSSNRGLRILAAILAVLVLAVGAGFAIDYFGGGPFSQRSTVTIPKLQN FT STQQDAVNQLEKLGLQVNVIEEPNPDIPRGKVIRTNPTDGSNVQRNSTVRLTISSGKEI FT TEVPDLSGKNTADAVKILEAAGLLLDPTVREDSSDTVPKGEIIEVSPAAGSQVSRGSKV FT SITVSTGVETVRVPVITGMKWDQAEGNLTSLGFKPEVVRVDSVEPAGTVVAVPDEGAEV FT PKGSSVTVQISNGAMFTVPEITRQTIDDAVRILHDAGWKGNASRLIQAAKVPTVAVTDQ FT NLIASQLPTPGTALRKDAPIEIRLYEFNLAALVPPAQH" FT misc_feature complement(order(44570..44635,44675..44740)) FT /note="2 probable transmembrane helices predicted for FT DIP0053 by TMHMM2.0" FT misc_feature complement(44879..45688) FT /note="HMMSmart hit to SM00220, Serine/Threonine protein FT kinases, catalytic domain" FT /note="ProfileScan hit to PS50011, Protein kinase domain FT profile." FT misc_feature complement(44888..45688) FT /note="HMMSmart hit to SM00219, Tyrosine kinase, catalytic FT domain" FT misc_feature complement(44978..45688) FT /note="HMMPfam hit to PF00069, Protein kinase domain" FT misc_feature complement(45281..45319) FT /note="ScanRegExp hit to PS00108, Serine/Threonine protein FT kinases active-site signature." FT misc_feature complement(45599..45670) FT /note="ScanRegExp hit to PS00107, Protein kinases FT ATP-binding region signature." FT CDS complement(45712..47217) FT /transl_table=11 FT /gene="pknA" FT /locus_tag="DIP0054" FT /product="probable serine/threonine-protein kinase" FT /EC_number="2.7.1.-" FT /note="Similar to Mycobacterium leprae probable FT serine/threonine-protein kinase PnkA or ML0017 FT SW:PKNA_MYCLE (P54743) (437 aa) fasta scores: E(): 4e-37, FT 41.99% id in 431 aa" FT /protein_id="CAE48562.1" FT /translation="MTQSQSPDPALQALVGSDYALQWVVGNGGMSTVWLADDLRNQREV FT AIKVLRPEFSDNEEFLSRFRNEALASEHIDSDNVVRTYDYREVTDDMGRTLCFIVMEYV FT RGESLADMLARKGRLEEDLALDVLEQAAHGLSIIHRMGMVHRDIKPGNLLITQNGQVKI FT TDFGIAKAAAAVPLTRTGMVVGTAQYVSPEQAQGRDVTAATDVYSLGVVGYEMLVGQRP FT FTGDSSVSVAIAHINQAPPAMPTSVSAPARELIGIALRKDPAHRYADGNELALAVSATR FT MGQRPPQPKSAPLQHIAPQPAPTESTYALGATAQPTTVIPATGQVPAAPAAAAYPASTV FT IPAGTPRQEPEKQSSGWGAGIVVGALAALLLGTAAWAASQGMFDDLFDKTSQSSESSVP FT PPPVTATVTETPTPQITTVIPEPLPTSSPEPTPSETEHTPDDSHPSSDHQLPSVRPSHN FT GRPSSQAPHAPTQDADQPAESPAPDTLGSLIENLNKLNQGGAQ" FT misc_feature complement(45772..46023) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature complement(45778..45855) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(45892..45942) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(45949..46014) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(46309..46347) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(46372..47163) FT /note="ProfileScan hit to PS50011, Protein kinase domain FT profile." FT misc_feature complement(46384..47163) FT /note="HMMSmart hit to SM00220, Serine/Threonine protein FT kinases, catalytic domain" FT misc_feature complement(46387..47163) FT /note="HMMSmart hit to SM00219, Tyrosine kinase, catalytic FT domain" FT misc_feature complement(46417..47163) FT /note="HMMPfam hit to PF00069, Protein kinase domain" FT misc_feature complement(46753..46791) FT /note="ScanRegExp hit to PS00108, Serine/Threonine protein FT kinases active-site signature." FT misc_feature complement(47074..47145) FT /note="ScanRegExp hit to PS00107, Protein kinases FT ATP-binding region signature." FT CDS complement(47230..48690) FT /transl_table=11 FT /gene="pbpA" FT /locus_tag="DIP0055" FT /product="Putative secreted penicillin-binding protein" FT /note="Similar to Mycobacterium leprae putative FT penicillin-binding protein PbpA or ML0018 TR:Q9CDE6 FT (EMBL:AL583917) (492 aa) fasta scores: E(): 1.3e-72, 45.9% FT id in 488 aa" FT /protein_id="CAE48563.1" FT /translation="MNRSIRFTSVFALLLILILLVNLTIIQGFSQEKYAHNALNRRGFI FT ELKSQARGQISTGGQVLAESYQDEEGFYQRRYVTNPAIYGPIEGYLSDIYGASGMESNL FT NGVLSGTDSSVSVRRWTDELLGRKHSGANVELTLLPQVQEVAYNQMANAGYEGAVVAIK FT PSTGEILAMASTPSYDPSAIVNPDTAEQTWAALNADPGNPLLNHATQETLPPGSTFKVI FT TTAAGLNAGYGPGSMLTGQDRITLPDGITTLENYAGQTCAGSQNVTLATAFQYSCNTAF FT VQMGIDVGKEKFDEAAHAFGVNDRYDLGVDMAPGTIGDVSDPSARGQSSIGQRDVAMSV FT LHNAVVAATVANGGKRMEPHLVNRIVGQDLKVIKETKPHQINEAVTPEVAATLTDLMRL FT SERHTAGYTGADIASKTGTAEHGEDSRNSNPHAWYIAFGPSANADVAVAVVVKNGGDAG FT QAATGGSVAAPIGRAVIAAAQAALAARG" FT misc_feature complement(47272..48273) FT /note="HMMPfam hit to PF00905, Penicillin binding protein FT transpeptidase domain" FT misc_feature complement(48607..48690) FT /note="Signal peptide predicted for DIP0055 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.438 between residues 28 and 29" FT CDS complement(48687..50036) FT /transl_table=11 FT /gene="ftsW" FT /locus_tag="DIP0056" FT /product="probable cell division protein" FT /note="Similar to Mycobacterium tuberculosis probable cell FT division protein FtsW or Rv0017c or MT0020 or MTCY10H4.17c FT SW:FTSW_MYCTU (P71587) (469 aa) fasta scores: E(): 8.7e-72, FT 48.61% id in 434 aa, and to Escherichia coli rod FT shape-determining protein MrdB or RodA or B0634 or Z0780 or FT ECS0672 SW:RODA_ECOLI (P15035) (370 aa) fasta scores: E(): FT 8.5e-19, 26.57% id in 365 aa" FT /protein_id="CAE48564.1" FT /translation="MTSLRRITARPVEFGLLVMATLLIAVTLINLNMAQGLSVTSETLW FT VIGGFIGVFTIAHLALCFTAPHADQVMLPVASVLNGLGLVMVYRIDLARDTALASRQVI FT WTLVGILLMIAVLVFIRDHRMLSRYSYVLGLLGLILLALPMVWPTKMNADANIWISIGP FT FSVQPGEFSKILLLIFFAQLLVNKRALFNVAGYRFLGLEFPRLRDLGPILGVWAFAILV FT MAGENDFGPALLLFSTVLGMLYLATNRVSWLIIGAALVAVGGTALYQISSKIQSRVTNF FT INPLDNFNGTGYQLSQSLFGLSSGGVAGAGLGLGHPELIPVAESDFILAAVGEELGFIG FT LAAVLVLFAIFITRGLRTALRARDSYGKLMAAGLSLTLAIQVFVVTAGITALMPMTGLT FT TPFMSQGGSSLMANYILLGLILRISHSTQAAANDVVSMDEQAARGQEAHR" FT misc_feature complement(48750..49832) FT /note="HMMPfam hit to PF01098, Cell cycle protein" FT misc_feature complement(order(48768..48833,48864..48929,48981..49046, FT 49092..49157,49221..49286,49332..49397,49479..49544, FT 49590..49655,49677..49727,49758..49823,49839..49904, FT 49935..50000)) FT /note="12 probable transmembrane helices predicted for FT DIP0056 by TMHMM2.0" FT CDS complement(50037..51494) FT /transl_table=11 FT /locus_tag="DIP0057" FT /product="Putative phosphoprotein phosphatase" FT /note="Similar to Mycobacterium leprae probable FT phosphoprotein phosphatase Ppp TR:Q50188 (EMBL:Z70722) (509 FT aa) fasta scores: E(): 5.8e-46, 43.64% id in 488 aa" FT /protein_id="CAE48565.1" FT /translation="MMLRLNYAAASDRGLVRGNNEDSAYAGPHLIALADGMGGHAAGEV FT ASQLMINHLMRLDADVDDNDMLALLASVADDANRAIAQGVRDVPETDGMGTTLTALMFN FT GADLAMCHVGDSRGYRLRDGALEQITVDDTYVQSLVDKGQLAPEDVSTHPQRSMILKAY FT TGRPVEPTLKMIDIRPGDRFLLCSDGLSDPVTHSTIETTLQQGTPQEAARRLVDLALRS FT GGPDNVTVVVADVVEADGSDKSAAAASLPVTPLTVGALNSGMPEDPRPDTAAGRAAMAI FT AQRQPQVILPDPEPVKEATPSPRRRMVAVISALVVLAVLISAGWWGSSMVKNNYYVTTA FT DSDSAQGALVIENGIDVSLLGKSLHSTYQFACLSPEGDLTFVDSADAEKSCHRFRLSDL FT KESARGQVSTLPDGSYDEVQQQLQRLAEQTLPACITRQAAHPKDKDKKKPAAPSSAAPT FT TTKAASPSSTGSPDDLSTPGETCREVK" FT misc_feature complement(50508..50573) FT /note="1 probable transmembrane helix predicted for DIP0057 FT by TMHMM2.0" FT misc_feature complement(50781..51215) FT /note="ProfileScan hit to PS50170, Protein phosphatase 2C, FT box 2." FT misc_feature complement(50790..51464) FT /note="HMMSmart hit to SM00331, Sigma factor PP2C-like FT phosphatases" FT misc_feature complement(50796..51491) FT /note="HMMSmart hit to SM00332, Serine/threonine FT phosphatases, family 2C, catalytic domain" FT misc_feature complement(50811..50990) FT /note="HMMPfam hit to PF00481, Protein phosphatase 2C" FT misc_feature complement(50814..51446) FT /note="BlastProDom hit to PD006823, PD006823" FT CDS complement(51491..51979) FT /transl_table=11 FT /locus_tag="DIP0058" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium leprae hypothetical 17.2 FT kDa protein MLB1770.14c or ML0021 TR:Q50189 (EMBL:Z70722) FT (155 aa) fasta scores: E(): 2.3e-13, 35% id in 160 aa" FT /protein_id="CAE48566.1" FT /translation="MESVIVFLLRIALLVLLWLLILLALYIQRKDAKSAAQTMVAPQAV FT TGLGVSSASSPLKKVSRRGGAPQQIVVVEGPLTGSSMQLDSLTEITLGRSKDCDFVVGD FT DYASARHARLIKRGSEWFAEDLDSRNGTYVGGYRIDQPEKVSAGSDIKIGRTTVRLVA" FT misc_feature complement(51518..51712) FT /note="HMMPfam hit to PF00498, FHA domain" FT misc_feature complement(51563..51712) FT /note="ProfileScan hit to PS50006, Forkhead-associated FT (FHA) domain profile." FT misc_feature complement(51563..51715) FT /note="HMMSmart hit to SM00240, Forkhead associated domain" FT misc_feature complement(51878..51979) FT /note="Signal peptide predicted for DIP0058 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.794 between residues 34 and 35" FT CDS complement(51993..52859) FT /transl_table=11 FT /locus_tag="DIP0059" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 30.8 FT kDa protein SCH69.13 TR:Q9XA21 (EMBL:AL079308) (290 aa) FT fasta scores: E(): 3.1e-11, 27.6% id in 297 aa" FT /protein_id="CAE48567.1" FT /translation="MSIMGKVAKLDSAMQRGLDNSFAFVFGGKLVPAEIEELLKQEVQD FT NIVRAYEGGVESPNVFRVRVSRKDAQNLAQRYPSLADDFADRLSRYTRNQGWSTEGPVV FT VTIAADSGLRTGQLHASSAFDPVPQEYSHFIGVEDDVAAAAPTNDESNYESESGMNSYD FT ADPRTEYMTAQAPDAIYTEVPVPEPKATPTVSLLLQDGSSRTYLVEEGSNIIGRSNEAH FT FRLPDTGVSRQHAEITWNGRDAILTDLKSTNGTTVNDTPVENWLLEDGDVITVGHSHIE FT VRIVEPN" FT misc_feature complement(52032..52223) FT /note="HMMPfam hit to PF00498, FHA domain" FT misc_feature complement(52074..52223) FT /note="ProfileScan hit to PS50006, Forkhead-associated FT (FHA) domain profile." FT misc_feature complement(52074..52226) FT /note="HMMSmart hit to SM00240, Forkhead associated domain" FT misc_feature complement(52170..52187) FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT tRNA 53080..53163 FT /gene="tRNA-Leu" FT /product="transfer RNA-Leu" FT /anticodon=(pos:53114..53116,aa:Leu) FT /note="tRNA Leu anticodon CAG, Cove score 57.69" FT CDS complement(join(53337..53534,53536..53667,53667..53720)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0060" FT /product="IS1628 transposase (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium glutamicum FT IS1628 transposase TnpB TR:Q9X542 (EMBL:AF121000) (236 aa) FT fasta scores: E(): 9e-47, 86.923% id in 130 aa. Presents FT frameshifts at residues 18 and 62" FT /db_xref="PSEUDO:CAE48568.1" FT CDS complement(53813..56047) FT /transl_table=11 FT /locus_tag="DIP0061" FT /product="Putative cation-transporting ATPase" FT /note="Similar to Enterococcus hirae probable copper FT exporting ATPase B CopB SW:COPB_ENTHR (P05425) (745 aa) FT fasta scores: E(): 2.2e-94, 43.228% id in 731 aa, and to FT Mycobacterium tuberculosis probable cation-transporting FT ATPase V CtpV or Rv0969 or MT0997 or MTCY10D7.05c FT SW:CTPV_MYCTU (P77894) (770 aa) fasta scores: E(): 2e-69, FT 40.092% id in 651 aa" FT /protein_id="CAE48569.1" FT /translation="MNTPNHSGDHHGDHPAPETDHTYHPDHASHEHHADADTHGHAKPH FT DHPHSALDEDHHVHGHGEHAGHSTAMFRERFWWSLILSIPVVIFSPMVAHLLGYHLPAF FT PGSTWIPPVLGTIIFVYGGTPFLKGGWNELKSRQPGMMLLIAMAITVAFVASWVTTLGL FT GGFELDFWWELALLVTIMLLGHWLEMSALGAASSALDALAALLPDEAEKVIDGTTRTVA FT ISELIVDDVVLVRAGARVPADGTILDGAAEFDEAMITGESRPVFRDTGDKVVAGTVATD FT NTVRIRVEATGGDTALAGIQRMVADAQESSSRAQALADRAAALLFWFALISALITAVVW FT TIIGSPDDAVVRTVTVLVIACPHALGLAIPLVIAISSERAAKSGVLIKDRMALERMRTI FT DVVLFDKTGTLTEGAHAVTGVAAAVGVTEGELLALAAAAEADSEHPVARAIVAAAAAHP FT EASRRQIRATGFSAASGRGVRATVDGAEILVGGPNMLREFNLTTPAELTDTTSAWTGRG FT AGVLHIVRDGQIIGAVAVEDKIRPESRAAVKALQDRGVKVAMITGDAQQVAQAVGQDLG FT IDEVFAEVLPQDKDTKVTQLQDRGLSVAMVGDGVNDAPALTRADVGIAIGAGTDVAMES FT AGVVLASDDPRAVLSMIELSQASYRKMIQNLIWASGYNILAVPLAAGVLASIGFVLSPA FT VGAILMSASTIVVALNAQLLRRIDLDPAHLAPTESKEEHTTPTPASTAVH" FT misc_feature 53813..60917 FT /note="Anomalous G+C content (63.8%) and dinucleotide FT signature. Putative metal transport system. Present also in FT C.glutamicum" FT misc_feature complement(order(53906..53971,53984..54049,54923..54988, FT 55019..55084,55487..55537,55553..55618,55658..55723, FT 55754..55819)) FT /note="8 probable transmembrane helices predicted for FT DIP0061 by TMHMM2.0" FT misc_feature complement(53969..54013) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(54062..54139) FT /note="FPrintScan hit to PR00120, H+-transporting ATPase FT (proton pump) signature" FT misc_feature complement(54125..54163) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54161..54853) FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT misc_feature complement(54173..54232) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54182..54232) FT /note="FPrintScan hit to PR00120, H+-transporting ATPase FT (proton pump) signature" FT misc_feature complement(54248..54301) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(54266..54316) FT /note="FPrintScan hit to PR00120, H+-transporting ATPase FT (proton pump) signature" FT misc_feature complement(54359..54391) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54422..54457) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54629..54808) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(54797..54841) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(54815..54835) FT /note="ScanRegExp hit to PS00154, E1-E2 ATPases FT phosphorylation site." FT misc_feature complement(54845..54892) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(54863..55522) FT /note="HMMPfam hit to PF00122, E1-E2 ATPase" FT misc_feature complement(55244..55288) FT /note="FPrintScan hit to PR00119, P-type FT cation-transporting ATPase superfamily signature" FT misc_feature complement(55403..55459) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(55514..55555) FT /note="ScanRegExp hit to PS01039, Bacterial extracellular FT solute-binding proteins, family 3 signature." FT misc_feature complement(55613..55672) FT /note="FPrintScan hit to PR00943, Copper-transporting FT ATPase signature" FT misc_feature complement(55847..56032) FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT CDS complement(56099..56425) FT /transl_table=11 FT /locus_tag="DIP0062" FT /product="Putative heavy metal-associated transport FT protein" FT /note="Similar to Deinococcus radiodurans conserved FT hypothetical protein DR2452 TR:Q9RRN6 (EMBL:AE002074) (68 FT aa) fasta scores: E(): 0.0038, 43.103% id in 58 aa, and to FT Streptococcus pyogenes putative copper chaperone-copper FT transport operon CopZ or SPY1714 TR:Q99YG6 (EMBL:AE006600) FT (67 aa) fasta scores: E(): 0.0065, 40.000% id in 60 aa, and FT to Pseudomonas syringae Plasmid pPaCu1 copper resistance FT operon ORFH protein TR:Q9KWM7 (EMBL:AB033420) (65 aa) fasta FT scores: E(): 0.025, 40.000% id in 60 aa, and to Candida FT albicans copper-transporting p-type ATPase Ccc2 TR:AAK52331 FT (EMBL:AY033084) (1204 aa) fasta scores: E(): 0.03, 28.571% FT id in 84 aa" FT /protein_id="CAE48570.1" FT /translation="MITSPSRLLPMASHGCSCCGPASHADTASIPAASDSSAGGSSPSY FT QVTGLTCGHCAKSVTQALQALPQVDDVQIDLAAGGVSTVTVTGVVPPEMVRRAIEEAGY FT TVLS" FT misc_feature complement(56102..56299) FT /note="HMMPfam hit to PF00403, Heavy-metal-associated FT domain" FT misc_feature complement(56198..56287) FT /note="ScanRegExp hit to PS01047, Heavy-metal-associated FT domain." FT misc_feature complement(56351..56425) FT /note="Signal peptide predicted for DIP0062 by SignalP 2.0 FT HMM (Signal peptide probability 0.861) with cleavage site FT probability 0.476 between residues 25 and 26" FT CDS complement(56540..57667) FT /transl_table=11 FT /locus_tag="DIP0063" FT /product="Putative two-component system sensor protein" FT /note="Similar to Escherichia coli sensor protein BaeS or FT B2078 SW:BAES_ECOLI (P30847) (467 aa) fasta scores: E(): FT 1.8e-28, 33.333% id in 372 aa" FT /protein_id="CAE48571.1" FT /translation="MNPGPGLTFRFLAAQVLVVVISLMVAAAVATMVGPTLFHDHMLMA FT GREDPSLGLFHAEQAYRDANLITLAVALPTALISALLASLWLSRRLRTPLQDLTRAATS FT LAAGNSRIRVPAGGAGPEVATLAHAFNTMADRLEHTEQVRRQMLSDLAHEMGTPLSVLT FT AYLDGLQDGVVDWNNANHTIMADQLTRLTRLMEDIDYVSRAQEHRIDLDLAEEGLGDLL FT HTAAAAAGEAYADKGVDLQVETITDTARVVVDRQRFGQVMSNLLSNALRHTPVGGQVRI FT SVHRQGASTALIHVADDGEGIPPGQLGHIFERFYRGDAARSRDNGGSGIGLTISKALIE FT AHGGTLTATSPGPGRGAVFTLRLPLSPPDSEEAAR" FT misc_feature complement(56567..56911) FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature complement(56567..57220) FT /note="ProfileScan hit to PS50109, Bacterial histidine FT kinase domain." FT misc_feature complement(56576..56617) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(56636..56692) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(56711..56743) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(56753..56797) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(57047..57241) FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain" FT /note="HMMSmart hit to SM00388, His Kinase A FT (phosphoacceptor) domain" FT misc_feature complement(57242..57403) FT /note="HMMSmart hit to SM00304, HAMP (Histidine kinases, FT Adenylyl cyclases, Methyl binding proteins, Phosphatases) FT domain" FT misc_feature complement(57251..57463) FT /note="HMMPfam hit to PF00672, HAMP domain" FT misc_feature complement(order(57404..57469,57557..57622)) FT /note="2 probable transmembrane helices predicted for FT DIP0063 by TMHMM2.0" FT CDS complement(57664..58386) FT /transl_table=11 FT /locus_tag="DIP0064" FT /product="Putative two-component system response regulator" FT /note="Similar to Enterococcus faecalis VicR protein FT TR:Q9REA7 (EMBL:AJ012050) (283 aa) fasta scores: E(): FT 5.5e-35, 44.978% id in 229 aa, to Bacillus subtilis FT alkaline phosphatase synthesis transcriptional regulatory FT protein PhoP SW:PHOP_BACSU (P13792) (240 aa) fasta scores: FT E(): 3e-34, 42.918% id in 233 aa, and to Bacillus subtilis FT hypothetical sensory transduction protein YycF FT SW:YYCF_BACSU (P37478) (235 aa) fasta scores: E(): 1.8e-33, FT 43.478% id in 230 aa" FT /protein_id="CAE48572.1" FT /translation="MADHTPTTATPPGRVLVVDDEQPLAQMVASYLIRAGFDTRQAHTG FT TQAVDEARRFSPDVVVLDLGLPELDGLEVCRRIRTFSDCYILMLTARGSEDDKISGLTL FT GADDYITKPFSIRELVTRVHAVLRRPRTSTTPPQVTTPLIVGDLILDPVAHQVRVEETI FT VELTRTEFELLVALALRPGQALTRHDLVTEVWDTTWVGDERIVDVHIGNLRRKLGTDTR FT GRGFIDTVRGVGYRMGQP" FT misc_feature complement(57685..57903) FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal" FT misc_feature complement(57994..58350) FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature complement(58006..58347) FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature complement(58018..58350) FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT CDS 58730..59365 FT /transl_table=11 FT /locus_tag="DIP0066" FT /product="Putative exported protein" FT /note="No database matches" FT /protein_id="CAE48573.1" FT /translation="MAPTLRRCLLTVLPRAKEIDVKRAAIAAAALALALTGCSAADPEP FT TADGTVSQDTFLTTHGLADMDAVEIIDHLDRQKVTERPTDLIASVRADELLLSSGDQEV FT VVDLPDNQTYVSIAPYLTSTHDCFYHSLTTCQGELSNEDIQVKITDEATGEVLVDEATT FT TFDNGFIGFWLPDDVTGLIEVSYQGRTGTTEFSTTDDGATCVTDLRLT" FT misc_feature 58730..58852 FT /note="Signal peptide predicted for DIP0066 by SignalP 2.0 FT HMM (Signal peptide probability 0.927) with cleavage site FT probability 0.560 between residues 46 and 47" FT CDS 59436..60917 FT /transl_table=11 FT /locus_tag="DIP0067" FT /product="Putative exported multicopper oxidase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT copper-binding protein, putative MT0869 TR:AAK45112 FT (EMBL:AE006975) (504 aa) fasta scores: E(): 9e-68, 43.028% FT id in 502 aa, and to Nicotiana tabacum L-ascorbate oxidase FT precursor Aao SW:ASO_TOBAC (Q40588) (578 aa) fasta scores: FT E(): 2.5e-14, 25.344% id in 509 aa. Note: Contains a FT putative twin-arginine translocation (TAT) system FT recognition motif (RRQFLL) at the N-terminal region" FT /protein_id="CAE48574.1" FT /translation="MTNAFSRRQFLLGGLVLAGTGAVAACTSDPGPAASAPGSSLRPTP FT TPTALGEPTVRRTLTARPLSLDIGGIEAKTWGYVSDTGDAAIEATAGDVLQVDITNELP FT ESTSIHWHGIALHNAADGVPGMTQDPIEPGESFSYVFEVPHGGTYFYHSHTGLQLDRGL FT HAPLIIRDPQDAEDQDVEWTIVLDDWVDGIQGTPDDELDKLTGMGSGDHNGKKGMGGHG FT HMMHGTPDRVLGGDAGDVMYPHYLINGRIPRAHRTFEARPGDKARLRFINSGGDTIFKV FT ALGGHRMTVTHTDGFPVQPWETESIYLSMGERVDVEVILGDGIFPLTALAVGKDDRAFA FT VIRTAGGQAPHPDVDFPELSSTGLLLSSLKPADRALLPEGTPDREVSIDLGGQMMPYEW FT RILTDGQSSSATVQEGQRLRMVMRNRTMMPHPMHIHGHTWALPGSGGLRKDTVLLRHGE FT TMIADLIADNPGEWAFHCHNAYHMETGMLSSLRYE" FT misc_feature 59436..59588 FT /note="Signal peptide predicted for DIP0067 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.505 between residues 51 and 52" FT misc_feature 59454..59471 FT /note="Potential twin-arginine recognition motif RRQFLL" FT misc_feature 59562..59954 FT /note="HMMPfam hit to PF00394, Multicopper oxidase" FT misc_feature 59874..59936 FT /note="ScanRegExp hit to PS00079, Multicopper oxidases FT signature 1." FT misc_feature 60105..60476 FT /note="HMMPfam hit to PF00394, Multicopper oxidase" FT misc_feature 60219..60248 FT /note="ScanRegExp hit to PS00215, Mitochondrial energy FT transfer proteins signature." FT misc_feature 60567..60914 FT /note="HMMPfam hit to PF00394, Multicopper oxidase" FT misc_feature 60843..60905 FT /note="ScanRegExp hit to PS00079, Multicopper oxidases FT signature 1." FT misc_feature 60858..60893 FT /note="ScanRegExp hit to PS00080, Multicopper oxidases FT signature 2." FT CDS complement(60895..61203) FT /transl_table=11 FT /locus_tag="DIP0068" FT /product="Hypothetical protein" FT /note="Weak similarities to Streptomyces coelicolor FT putative DNA polymerase III, epsilon chain SCI8.12 FT TR:Q9RJ41 (EMBL:AL132644) (328 aa) fasta scores: E(): 2.7, FT 42.22% id in 45 aa, and to Thermotoga maritima DNA FT polymerase III PolC-type PolC or TM0576 SW:DPO3_THEMA FT (Q9ZHF6) (1367 aa) fasta scores: E(): 9.3, 39.58% id in 48 FT aa" FT /protein_id="CAE48575.1" FT /translation="MSVWASRLKAMGLLENLLNRYTPRTSGTPVFAVIDTGTTGFNKRY FT DHIIELAAVRADAYFKPVDSWHALLNPDTNAVSTTRGTPPPTSALNPAVGVTRSEAS" FT CDS join(61342..62073,62073..62645) FT /pseudo FT /transl_table=11 FT /gene="tnp1250A" FT /locus_tag="DIP0069" FT /product="transposase (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium striatum FT transposase Tnp1250A or Tnp1250B TR:Q9ET89 (EMBL:AF024666) FT (416 aa) fasta scores: E(): 1.3e-143, 88.38% id in 396 aa. FT Presents a frameshift at residue 244" FT /db_xref="PSEUDO:CAE48576.1" FT misc_feature 61471..62070 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 62082..62537 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT misc_feature 62094..62168 FT /note="ScanRegExp hit to PS01007, Transposases, Mutator FT family, signature." FT CDS complement(62898..63353) FT /transl_table=11 FT /locus_tag="DIP0071" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48577.1" FT /translation="MKLSPHCSLPLTLGGTTDQVASQCYEHEIIDNDFVTELEGFIDIE FT NIEPGDEGRKIICRVENGRCVTVTMAYLDLPITDTFLGLGLNYGPNAKAQFLAGLRHQG FT VEVIAQSEYIILPNDFVTIELGESITWWDRAYWGTDGFLNEAISLQP" FT CDS complement(63350..63850) FT /transl_table=11 FT /locus_tag="DIP0072" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48578.1" FT /translation="MLASQTQKLTHRINHDARRSEPSTRFSHIRFRLLRDSMDFSKSPV FT TSIVLNAPVNDYSAILTDFKFFDNPLFSHLSGKLLIGESMRNIKFGAKRDMVTSAEIID FT IVASDSFMGIPLSQRAKTFYHSLLTAGIEAKMDKWGIELANQPVGFSTEKGKIASIHWS FT ASR" FT CDS complement(63823..64218) FT /transl_table=11 FT /locus_tag="DIP0073" FT /product="Conserved hypothetical protein" FT /note="Weakly similar to Rhizobium loti MLR2640 protein FT TR:Q98HZ4 (EMBL:AP003000) (140 aa) fasta scores: E(): 4.2, FT 27.1% id in 107 aa" FT /note="Conserved hypothetical protein" FT /protein_id="CAE48579.1" FT /translation="MDFLKQPCAPLDFDLSREQIEGMLRSARFIKGSFSTRVVGHLPID FT NSFRQVSVAIENETSSSIEIMTLERGDTFCGIPLKQRKIPFQNSLKSADIDFTYDDSGI FT DLTNAPVSFFIEGGRVASICWHHKHRN" FT CDS complement(64253..64393) FT /transl_table=11 FT /locus_tag="DIP0074" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48580.1" FT /translation="MQEGKVEEAFRIEYEFISQTFPGKYGQALDEMMAYTRQQGLISSP FT A" FT CDS 64602..66083 FT /transl_table=11 FT /locus_tag="DIP0075" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48581.1" FT /translation="MADDPLYLDRTGEWAGLWWLPEIPDEKVPGFLRYDAECGLLLSLI FT GAFEDRVTSNPSPGVTAYHEGTRTWEVIHGVAEQREITLFDTIPISSKRTIGARVESPA FT KQTVTASVAIIGAHVRSEGDPQFAGVEVSVEDLGRWAGSSVFEGLLGAPDGNFDGTGSI FT SVKPVEAQSVLVGGTEYRLVHTHTLPYFDQRKSETVGRMRDTVSIRIVPASPFSLNAAL FT HEASLVQDLISLATHQSAGVIWLRVEVARSESQLPDGRTSPRRRADVLYSPVALGKHDA FT KPVDHHRMFFTCNSLPFEEVLPRWCETHVRLQAATNMILGLRYAPARFVENNLLTAVGA FT AEALHRNLRIGEKPFSKAEFTAMRGAMLDQVPSEHRERFKAAIRNDPTLRDRLHALAAR FT PDEEAIGQLIPDVDYWAKRTTRARNDLAHEGRTPNHSFEELVAIVEVTTAVVILNVLQE FT LGLSAERQREIVLTHPKLRHTVGLSREWLVPSKSD" FT misc_feature 64602..64688 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 66426..66797 FT /transl_table=11 FT /locus_tag="DIP0076" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48582.1" FT /translation="MYDNTTDTKMQAERQKKSCTTVGGVLAYSVPTGLHRCDSAVTRVE FT EVHMAEMVEIPAALYGRGAVRVVPVDSTVRLDVKIPAALMRKLMIESNRSGVPLTKIVD FT RLLSAAIAQDSEQEEIRPR" FT CDS 66921..67721 FT /transl_table=11 FT /locus_tag="DIP0077" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48583.1" FT /translation="MEEIWLSCHALVFHTTPTQRLCVGWGELAVGRFVKMAAAPAPEMT FT PRLDVSKNATDPDSLTDHGFQYSRHRPVITDHKRFDRLVGFSIKQSNVELAAEAIKQAA FT TVWCLTEKKSDKRDEDSVKFLATYLYKESLYWGKIDPRRALQRATAESWLGSQSFAPTS FT ARTYKAVLHTAGRVLYPAEFPPANRYSNPRAKPVDPASVELIDELYGVAATLPAVHRLR FT LQLILDLTTQSGLRSAEVLDLRGSDVTARILDTGERIALVRVHR" FT CDS 67740..68582 FT /transl_table=11 FT /locus_tag="DIP0078" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48584.1" FT /translation="MPVISPARSKRLLDHAKTVGRGHFFPSPSGGRPYNSSVANVFRYL FT RERGFPSTTVEALRARWLVDLANSPLPAAMVFQLAGNSHYWSLATHHDHLMSMEPKGVA FT ELMLRAKGVGMISMLEHGFVIKADVWSRAQEVIRRGYAAEYIEQINAQYRGAGGRKATA FT VVPSIEAVLTAGLALIMIGKPASIAGIHRLLCELEPDQRLECGFAKDGALLAYPAFANW FT LTRQLEVFDPGADLVARRVLNHVHREQLAARTAEQREASELARARRDELVNLIVAGSR" FT CDS 68563..69828 FT /transl_table=11 FT /locus_tag="DIP0079" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48585.1" FT /translation="MLPAVDDRCSGGYAGDVVADETIIDLAGPSEGLGVRPDKQRAAAY FT AGAYYIRDKTHQLGTGEKMREVTKRGFGIGVTAVSRVGSADDLYSVSPVITAISIDKPS FT PGSTVALGRALQMHQANGFAASVKTKANARLPYLCVDMGYSVRPDFTTVVHDHGFAPVM FT RYPVSRQTVWASEKPEFGSQSPGPVQINSAFYCPAALPLARQRRLVRRLNELLDEQDGF FT EAHDQALQKLLPLLMGTNSRPLKFVSKRKRSPETIPTYQIDLVCPAVQGRVKCPLKPES FT LIIAFDQPEVKPTWSADRYRCCSKSQIRHTYSSEQWKLAQWGMVPGSWEHAIYYEAARS FT LTEQRFSIMKSQHLSGREHLKWSPRREPMISVIIALWIAATNLAIQDSHVAKMPRPSSI FT KKQKRRLERDLGRALMSTPPRT" FT CDS 69994..70125 FT /transl_table=11 FT /locus_tag="DIP0080" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48586.1" FT /translation="MLEGDQMGFRVDFLPGVLLRGSSGLLIFDLGSSFETLVVDLGS" FT CDS 70294..70473 FT /transl_table=11 FT /locus_tag="DIP0081" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48587.1" FT /translation="MARSRNGSTIVGRKSLVPRRRNRLALKHCLTVWVFVRGRNGELCR FT PTKLPDFSGDDVHG" FT CDS 70504..70929 FT /transl_table=11 FT /locus_tag="DIP0082" FT /product="Putative secreted protein" FT /note="Possible secreted protein. No database matches" FT /protein_id="CAE48588.1" FT /translation="MRGRKRKVRLSGVMTLTMFLKSAADYFVYFHTHFISTKIRSFFAA FT VATVFSALVFSCPLASAASDAIPEDATSRVVVEPGESFTFTFDDETSNDGVFTRSVNAV FT AFTGTFAAPQAEAGGIISYGLHVRCTGTGFLPLSAKI" FT misc_feature 70504..70689 FT /note="Signal peptide predicted for DIP0082 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.436 between residues 62 and 63" FT CDS 70997..71137 FT /transl_table=11 FT /locus_tag="DIP0083" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48589.1" FT /translation="MATDLSVEKQSVGQLLPVMITEFLERFLQDRIMALASLEKSIFRA FT M" FT CDS 71572..71700 FT /transl_table=11 FT /locus_tag="DIP0084" FT /product="Putative membrane protein" FT /note="Doubtful CDS. Possible membrane protein. No database FT matches" FT /protein_id="CAE48590.1" FT /translation="MVTLAVVVPVTVFVLRFLMKAMKAMDIMIENNKWDGASSDEK" FT misc_feature 71575..71628 FT /note="1 probable transmembrane helix predicted for DIP0084 FT by TMHMM2.0" FT CDS complement(71845..72360) FT /transl_table=11 FT /locus_tag="DIP0085" FT /product="Putative membrane protein" FT /note="Weakly similar to Euhadra herklotsi NADH FT dehydrogenase subunit 1 TR:O21342 (EMBL:Z71695) (296 aa) FT fasta scores: E(): 0.57, 24.16% id in 120 aa" FT /protein_id="CAE48591.1" FT /translation="MNSQIKERFYDFAISNGNHYPRWRNPQSTHLLITGYFVSLVLALI FT FELLMFAWIHFIWLFIACMFIAMTCWTILRSTIDLKDMAPEDRLDDYEKAVINQWRQRS FT LSTALSLLFIGGLAAIIASASFIATDSPLSPNLLAIFAGLYMIYTYIFASSLPAVGYAL FT TFNRNPEE" FT misc_feature complement(order(71884..71949,71980..72045,72139..72189, FT 72202..72267)) FT /note="4 probable transmembrane helices predicted for FT DIP0085 by TMHMM2.0" FT CDS complement(72365..72664) FT /transl_table=11 FT /locus_tag="DIP0086" FT /product="Putative regulatory protein" FT /note="Similar to Deinococcus radiodurans transcriptional FT regulator, HTH_3 family DR2259 TR:Q9RS68 (EMBL:AE002058) FT (82 aa) fasta scores: E(): 1.3e-10, 47.67% id in 86 aa" FT /protein_id="CAE48592.1" FT /translation="MTIYYVYTTLYCMSPKKKLERTIYNRIRVLRTERDMSRAQLAELV FT DVNPQTIGALERGDHSPSLDLALRICDVFNLPIEAIFSRIPFTPLTAASLTQGA" FT misc_feature complement(72422..72586) FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT misc_feature complement(72422..72589) FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature complement(72494..72559) FT /note="Predicted helix-turn-helix motif with score 1845 FT (+5.47 SD) at aa 36-57, sequence MSRAQLAELVDVNPQTIGALER" FT CDS complement(join(72678..73145,73171..73497)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0087" FT /product="Putative antibiotic production protein FT (pseudogene)" FT /note="Pseudogene. Similar to Pseudomonas chlororaphis FT phenazine biosynthesis protein PhzF or PhzC SW:PHZF_PSECL FT (Q51520) (278 aa) fasta scores: E(): 1.1e-11, 32.92% id in FT 246 aa, and to Pseudomonas fluorescens phenazine FT biosynthesis protein PhzF SW:PHZF_PSEFL (Q51792) (278 aa) FT fasta scores: E(): 1.8e-11, 32.38% id in 247 aa. Presents a FT frameshift at residue 109" FT /db_xref="PSEUDO:CAE48593.1" FT CDS complement(73648..74943) FT /transl_table=11 FT /locus_tag="DIP0089" FT /product="Putative membrane protein" FT /note="Weakly similar in its N-terminal region to Bacillus FT subtilis SpaE TR:O52853 (EMBL:U09819) (251 aa) fasta FT scores: E(): 0.0095, 21% id in 200 aa" FT /protein_id="CAE48594.1" FT /translation="MWQSMYATGIAAPLTAMFAASAELREHHARMGGRHWRGLSMRSLR FT LARFVAVIACVAVFHVLNFGGTWLLALLDGRTGANRILLLGVLSWVGAIGVAGLAMACA FT RSTNIVITLVVFLVWQLAGTTRPIVEGSVWWAFPFAWPVRLVLPVLQVHQNAVPLEPDA FT ALRHESPWLALLLCLVLAVAGAIIAVVTPRYCIAFRRAHQHVSTAVLREASTRRPADRP FT RNVLPALLPVALTPAVRSCIILCTILILCVAMIYPPSYVHGLFTFAILPIGAGILPALI FT WPTTAPAWNIMRIENPHCTPTLLSIHALCVSAMSAIAALAGLISGSPLSTELTRLTLAI FT PVGCMLTMIALLIVTRFGTTTTIIWAVIWTIISATLGGDVLADTPLWLLAAAAWPEIAH FT GPRWLVAFSIAAITCAALYPLCARTLRTHRSE" FT misc_feature complement(order(73678..73734,73795..73860,73882..73938, FT 73969..74034,74098..74163,74176..74268,74374..74430, FT 74557..74613,74635..74700,74731..74796)) FT /note="10 probable transmembrane helices predicted for FT DIP0089 by TMHMM2.0" FT CDS complement(75080..75781) FT /transl_table=11 FT /locus_tag="DIP0090" FT /product="ABC transport system ATP-binding protein" FT /note="Similar to Lactococcus lactis NisF TR:Q48597 FT (EMBL:U17255) (225 aa) fasta scores: E(): 1.3e-25, 43.8% id FT in 226 aa, and to Staphylococcus epidermidis putative ABC FT transporter subunit EpiF TR:Q54002 (EMBL:U77778) (231 aa) FT fasta scores: E(): 7.1e-21, 38.15% id in 228 aa" FT /protein_id="CAE48595.1" FT /translation="MSTTIRVNEVSKSFHGQHVLNNVSCDIRPGEVHALLGRNGAGKST FT LFSILLGLIPADSGEVTIDISQVGASIDGPAFYGHLSARSNVRVHSTLLGLPDSEADRV FT LDVVGLSDVGSKKARSFSTGMKARLALAQAILGDPDILILDEPQNGLDPQGIRDLRALL FT RAWAASGKTVLVSSHQLGEVTQLADTVTILAEGTIRYSGPLNQLAPQGQLEQEFFRLTQ FT PGVLEAGDHHE" FT misc_feature complement(75170..75697) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(75194..75694) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(75206..75421) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(75266..75289) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(75611..75688) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(75650..75673) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(75820..76479) FT /transl_table=11 FT /locus_tag="DIP0091" FT /product="Putative two-component system response regulator" FT /note="Similar to Streptomyces lividans response regulator FT homolog TR:P72471 (EMBL:U63847) (225 aa) fasta scores: E(): FT 2.7e-29, 42.98% id in 221 aa, and to Streptomyces FT coelicolor putative two-component system regulator FT SCH10.18c TR:Q9X8Q7 (EMBL:AL049754) (228 aa) fasta scores: FT E(): 3e-26, 38.53% id in 218 aa" FT /protein_id="CAE48596.1" FT /translation="MIRIVLADDQPPILKAFSTIIHSRDTMRVVATAANGAEAINACMS FT HNVDVVVMDIRMPVMDGITAARAILARHPRIRIVMLTTFDDPTLVREALTAGVHGFLLK FT DADPEIFLTAIEAIHSGESVLASGVTKQVIDTFRHAYGSDLSPEQRQGLSLITRREMDV FT LLCVAQGLTNAEISADLGIAETTVKTHITALLAKVHARDRVALVLFVHKAGLLLPR" FT misc_feature complement(75826..76023) FT /note="HMMPfam hit to PF00196, Bacterial regulatory FT proteins, luxR family" FT misc_feature complement(75850..76023) FT /note="HMMSmart hit to SM00421, helix_turn_helix, Lux FT Regulon" FT misc_feature complement(75862..76014) FT /note="ProfileScan hit to PS50043, Helix-turn-helix domain, FT luxR and related types (substantial overlap with lysR FT type)." FT misc_feature complement(75886..75924) FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature complement(75889..75972) FT /note="ScanRegExp hit to PS00622, Bacterial regulatory FT proteins, luxR family signature." FT misc_feature complement(75922..75972) FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature complement(75970..76014) FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature complement(76111..76476) FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature complement(76123..76473) FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature complement(76135..76476) FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT CDS complement(76479..77708) FT /transl_table=11 FT /locus_tag="DIP0092" FT /product="Putative two component system sensor kinase" FT /note="Similar to Streptomyces coelicolor putative two FT component sensor kinase SC5F7.35c TR:Q9S2S0 (EMBL:AL096872) FT (416 aa) fasta scores: E(): 2.9e-17, 32.79% id in 308 aa, FT and to Streptomyces coelicolor putative two-component FT system sensor kinase SCH10.17c TR:Q9X8Q6 (EMBL:AL049754) FT (472 aa) fasta scores: E(): 1.1e-11, 33.61% id in 241 aa" FT /protein_id="CAE48597.1" FT /translation="MPNLIFSYISHLRKRRAPQKDLARTTHHTTTIATMARLGDKILTA FT TATIITAGYLFFATQTPSAHNTAHAAISILFLPFIWHWRSRPKLSSAGFVTLLGAWAAV FT WCHALPENMGITPWAVLAPMAVYAPARYLPQRNWGRIILLLTLAGSFVSPAMWRLDSHL FT LLHYREGMELVLAIGFHWALLGCVYAVGARYFLADQARETAYQSAREEEKLLIARELHD FT VLAHSLTLIKVQAQAGLYGGDQREALEEILNAAATSLEEVRGIVQALRDPTQSGAMQPL FT CQLADLAEIIASFERAGLNISAHLPQHCPPVPTLVQLAGVRIVSEALTNVVKHQGVGST FT VQLSVQVDEQLQITVDSQATAPTGASTSPGSGLLGLNERATALGGRFSAQGTASDFHVC FT ATIPMHQEDH" FT misc_feature complement(order(77121..77186,77232..77297,77319..77369, FT 77382..77438,77460..77510,77526..77582)) FT /note="6 probable transmembrane helices predicted for FT DIP0092 by TMHMM2.0" FT misc_feature complement(77472..77504) FT /note="ScanRegExp hit to PS00133, Zinc carboxypeptidases, FT zinc-binding region 2 signature." FT CDS complement(77804..78145) FT /transl_table=11 FT /locus_tag="DIP0093" FT /product="Putative membrane protein" FT /note="Probable membrane protein. No database matches" FT /protein_id="CAE48598.1" FT /translation="MIIPVAVMQCVAVAIVNVINVVVVRNCYVTATWAMLMLMVGVGVM FT LGGFTLIPVAVMFAVQVAVVNIVNMVAVRNCHMATVRAVLVGVVLVNYVGHDVETPLSR FT CEKLFFNKL" FT misc_feature complement(77852..78145) FT /note="ProfileScan hit to PS50326, Valine-rich region." FT misc_feature complement(order(77861..77911,77972..78037,78074..78130)) FT /note="3 probable transmembrane helices predicted for FT DIP0093 by TMHMM2.0" FT CDS complement(78214..78330) FT /transl_table=11 FT /locus_tag="DIP0094" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48599.1" FT /translation="MYKIPRGDVGIVIQQSPTQHWPLNRVVIFQFLRFLESK" FT CDS complement(78414..79088) FT /transl_table=11 FT /gene="opuBB" FT /gene_synonym="proW" FT /locus_tag="DIP0095" FT /product="choline transport system permease protein" FT /note="Similar to Bacillus subtilis choline transport FT system permease protein OpuBB or ProW SW:OPBB_BACSU FT (Q45461) (217 aa) fasta scores: E(): 3e-14, 30.72% id in FT 192 aa, and to Mycobacterium tuberculosis putative FT transport system permease Rv3756c or MTV025.104c TR:O69722 FT (EMBL:AL022121) (239 aa) fasta scores: E(): 1.9e-28, 48.32% FT id in 209 aa" FT /protein_id="CAE48600.1" FT /translation="MTWFGDLLSYLTTAAHWWGSQGFLARLLEHVGISLAAVAIAALLA FT LPAGVLIGHTGRGAGLVGGVSGAARALPTLGLLTIFGLAFGIGLTAPMLALIILAIPSL FT LAGAYSGVAAVDRATIDAAYAMGFTHRQVISSIELPLSAAVLVGGIRAAVLQVTATATL FT AAYTADVGLGRFIFHGLKTRDYIEMLAASVLVIALALLFDALLGGAQKLISQRTRTATP FT AP" FT misc_feature complement(order(78465..78530,78624..78689,78750..78815, FT 78846..78911,78933..78998)) FT /note="5 probable transmembrane helices predicted for FT DIP0095 by TMHMM2.0" FT misc_feature complement(78546..78758) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT CDS complement(79095..79736) FT /transl_table=11 FT /gene="opuBD" FT /gene_synonym="proZ" FT /locus_tag="DIP0096" FT /product="choline transport system permease protein" FT /note="Similar to Bacillus subtilis choline transport FT system permease protein OpuBD or ProZ SW:OPBD_BACSU FT (P39775) (226 aa) fasta scores: E(): 8.5e-13, 29.44% id in FT 197 aa, and to Mycobacterium tuberculosis transport system FT permease Rv3757c or MTV025.105c TR:O69723 (EMBL:AL022121) FT (229 aa) fasta scores: E(): 4.7e-25, 39.71% id in 209 aa" FT /protein_id="CAE48601.1" FT /translation="MWLMHAWPEVLDLLRAHVLLSVPAIVISVLVAVPVGLFAARHPRV FT GNTVVQVTSLAYTIPALPMLVIVPFIVAVPLRSQINVIIALCVYGIALIVRTATDAFRS FT VPEEVRTAAVAQGMSPSQIAWKVDMPLAIPVLISGLRVLCVSTVGLVTIGALIGVSSLG FT SLFTDGFQRNITAEVVVGIVAVVLLAVLFDVACLILQRLCTPWTRPGKAR" FT misc_feature complement(order(79140..79205,79266..79331,79452..79502, FT 79515..79580,79617..79682)) FT /note="5 probable transmembrane helices predicted for FT DIP0096 by TMHMM2.0" FT misc_feature complement(79224..79436) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT CDS complement(79727..80557) FT /transl_table=11 FT /gene="opuBA" FT /gene_synonym="proV" FT /locus_tag="DIP0097" FT /product="choline transport system ATP-binding protein" FT /note="Similar to Bacillus subtilis choline transport FT ATP-binding protein OpuBA or ProV SW:OPBA_BACSU (Q45460) FT (381 aa) fasta scores: E(): 2.5e-42, 50.58% id in 255 aa, FT and to Mycobacterium tuberculosis putative ABC transporter FT ATP-binding protein Rv3758c or MTV025.106c TR:O69724 FT (EMBL:AL022121) (376 aa) fasta scores: E(): 1.3e-42, 53.62% FT id in 248 aa" FT /protein_id="CAE48602.1" FT /translation="MIEFESVSKRYGKRGEKAVADFSLFIPKGKTTVLVGSSGSGKTTL FT LRMINRMVEPTEGRVIVRGKDVAETDPVQLRRSIGYVIQSAGLLPHRTVIQNIALVPTL FT NKEPKAEIERRAKQALADVNLEPSLANRYPGELSGGQQQRVGVARALASDPDILLMDEP FT FGAVDPIVRRSLQKQLIDLQSRLHKTVVMVTHDIDEAFCVGDHIVVLEKGGKIAQQGSP FT AHIFAHPANDFVASFLGSDQENRSLHTELIDGHTVVVDTFGRPLGTLGDGATCG" FT misc_feature complement(79916..80476) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(79919..80473) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(79931..80149) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(80105..80149) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(80390..80467) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(80429..80452) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(80567..81175) FT /transl_table=11 FT /locus_tag="DIP0098" FT /product="Putative membrane protein" FT /note="Weakly similar to Mycobacterium tuberculosis FT hypothetical 23.9 kDa protein Rv0444c or MTV037.08C FT TR:O53729 (EMBL:AL021932) (232 aa) fasta scores: E(): FT 0.004, 25.94% id in 212 aa" FT /protein_id="CAE48603.1" FT /translation="MSNNFPRDIEDALNVSPAPLTPPPALKLSVMDTIAATPQEQPAQP FT EPEQLATVTPLRRRRPGLVFASMAASVVLLAGAVTAVYQPWQAADPHAQMDSILAASDV FT RQADASAMGATLDIVVSQSMNSGGAMVDGAPAVGHGMGAQVWAVKTDGSMESAGVIGPE FT EHTDVWMPLPGDTHKVMITEEPMAGSTSPRGKVLAEVVV" FT misc_feature complement(80927..80992) FT /note="1 probable transmembrane helix predicted for DIP0098 FT by TMHMM2.0" FT CDS complement(81172..81756) FT /transl_table=11 FT /locus_tag="DIP0099" FT /product="Putative RNA polymerase sigma factor" FT /note="Similar to Streptomyces coelicolor putative RNA FT polymerase sigma factor SCI11.12c TR:Q9S2A7 (EMBL:AL096849) FT (185 aa) fasta scores: E(): 2.8e-25, 47.36% id in 171 aa, FT and to Bacillus subtilis RNA polymerase sigma factor SigW FT SW:SIGW_BACSU (Q45585) (187 aa) fasta scores: E(): 3.9e-10, FT 31.39% id in 172 aa" FT /protein_id="CAE48604.1" FT /translation="MTAVELLVMDPDDLLVAVASGDQAAFAQLYDQLAPYVLGLSTQVI FT HDRAQAEEVTQEVFVEVWRTAPSFDASRGSARSWILRLARSRAIDRVRSDIASKKRDTT FT DFLHSATTWCAAEEEAVESLESQQVRALVDSIGEPHRTAIMLSYFQGLTHSEIAEATGV FT PLGTAKTRLRDGLKKLRQIVHPHLSATGAAR" FT misc_feature complement(81238..81303) FT /note="Predicted helix-turn-helix motif with score 1081 FT (+2.87 SD) at aa 152-173, sequence LTHSEIAEATGVPLGTAKTRLR" FT misc_feature complement(81472..81642) FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily)" FT CDS complement(81783..82181) FT /transl_table=11 FT /locus_tag="DIP0100" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48605.1" FT /translation="MDCSQCEKTFFTQPQSVSHRSSEYPYETHREHSWCQPSSKQVIVK FT HKEYSLMRMTTKAALTMMFAAGAFGLAACGDNGTSEKMTSETSTHMSSEKMTPESDKMM FT ESDKMEHDKMDGKMDHDKMTHESDAMQK" FT CDS 82259..83899 FT /transl_table=11 FT /locus_tag="DIP0101" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis DipZ protein FT Rv2874 or MT2942 or MTCY274.05 SW:DIPZ_MYCTU (Q10801) (695 FT aa) fasta scores: E(): 1.6e-43, 43.65% id in 591 aa" FT /protein_id="CAE48606.1" FT /translation="MFELATIGLIGGIVTGISPCILPVLPVVLAVSVGRRPTHVVAGLA FT LSFATITLLGTVILSSLGLPKDVLRWTGIGLLVIVGLSMMIPKLGELVEEPFSRIPRPT FT FLQQKARDKGGFMIGLALGAVYVPCAGPILAAITVAGATGDIGWPTVVLTVAFAVGASL FT PLLVFALAGNKMGEKIDAIRKHMKLVGAVILALALAMALNIPERVQRAIPDWTAGVQKQ FT ISENDTVRGALSSGGGSLAACRDADPSMLHDCGEAPEFEGLTGWFNTDKPVSTHSGQVT FT LVDFWAYACINCQRAGEHITKLYDAYRDAGLQVVGVHAPEYGFEHELANVKDAAKREGI FT NYPVAQDNDFVTWKKYNNRYWPARYLIDAQGNVRHIHEGEGAYKETEQLVRELLREANP FT QVSLPEPVEKGVEKHDAQLTQRRNPETYLGYERARYFTNSNYGPGERTLEFNAPKVGQY FT TLSGTWEIASDHINPVKDAALSVNIHAATVQTVVSGTGTLEVTYPDGHTKEFKVADGTV FT NVVEQDEPLDGIVTVKPSQGVSFYSLTFG" FT misc_feature 82259..82348 FT /note="Signal peptide predicted for DIP0101 by SignalP 2.0 FT HMM (Signal peptide probability 0.826) with cleavage site FT probability 0.363 between residues 30 and 31" FT misc_feature 82280..82864 FT /note="HMMPfam hit to PF02683, Cytochrome C biogenesis FT protein transmembrane region" FT misc_feature order(82286..82354,82373..82441,82469..82537,82598..82666, FT 82694..82762,82820..82873) FT /note="6 probable transmembrane helices predicted for FT DIP0101 by TMHMM2.0" FT misc_feature 83060..83434 FT /note="ProfileScan hit to PS50223, Thioredoxin-domain (does FT not find all)." FT CDS complement(83969..84745) FT /transl_table=11 FT /gene="tipA" FT /locus_tag="DIP0102" FT /product="transcriptional activator" FT /note="Similar to Streptomyces coelicolor transcriptional FT activator TipA or SCE9.20 SW:TIPA_STRCO (P32184) (253 aa) FT fasta scores: E(): 5.3e-24, 35.85% id in 251 aa" FT /protein_id="CAE48607.1" FT /translation="MVTPMEEHNLRTVGEVADLVGVSVRTLHHWDDIGLVSPQWRSWAD FT YRLYSEEDVAQIYQVLLYRETGMPLKTIRDMLEGNSSPADHLQRQLELLQQRKHRVTSM FT IESVHQLLEDTMNHNEPLSADHTAKVLGREWSKWEKEAEERWGDTEDWAIFQQRAAQMG FT KDDFAARQMVMHKLDQRLAQAFESGMAPDSPDAHALAEEHRACLSQWFPVSHSKHALIA FT QGYTADPRFTAHYDKYAKGLAVWLEKAIQSNAQRHT" FT misc_feature complement(84506..84712) FT /note="HMMSmart hit to SM00422, helix_turn_helix, mercury FT resistance" FT misc_feature complement(84545..84607) FT /note="FPrintScan hit to PR00040, MerR bacterial regulatory FT protein HTH signature" FT misc_feature complement(84599..84706) FT /note="HMMPfam hit to PF00376, Bacterial regulatory FT proteins, merR family" FT misc_feature complement(84638..84679) FT /note="FPrintScan hit to PR00040, MerR bacterial regulatory FT protein HTH signature" FT misc_feature complement(84638..84706) FT /note="ScanRegExp hit to PS00552, Bacterial regulatory FT proteins, merR family signature." FT misc_feature complement(84650..84715) FT /note="Predicted helix-turn-helix motif with score 1580 FT (+4.57 SD) at aa 11-32, sequence RTVGEVADLVGVSVRTLHHWDD" FT misc_feature complement(84677..84712) FT /note="FPrintScan hit to PR00040, MerR bacterial regulatory FT protein HTH signature" FT CDS complement(84797..84964) FT /transl_table=11 FT /locus_tag="DIP0103" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML2114 TR:Q9CBE3 (EMBL:AL583924) (56 aa) fasta scores: E(): FT 1.7e-05, 52.08% id in 48 aa" FT /protein_id="CAE48608.1" FT /translation="MDILNKAKDLINNNSDKVKEAVDKAGDFIDSKTEGKYADKVDQVQ FT EAVKKKIDEQ" FT CDS complement(84975..86321) FT /transl_table=11 FT /locus_tag="DIP0104" FT /product="Putative peptidase" FT /note="Similar to Streptomyces coelicolor putative FT peptidase SCI52.18c TR:Q9AD91 (EMBL:AL590507) (445 aa) FT fasta scores: E(): 1e-31, 32.04% id in 440 aa" FT /protein_id="CAE48609.1" FT /translation="MSITPIALNVVHMTLYDDTLALLTELIRNACVNDLTPDSGHEERN FT AATLEEFFAGSPVNIQRFEPHPGRVSLVVTVAGSDLAAEPLTFLGHTDVVPVDTQHWSV FT PPFDATIIDGKLYGRGSVDMLFITATMAAVTRHVARTGGNAGTLYFTALADEEARGGLG FT AAWLAQHHPDALSWKNCISETGGSHIPGRDDSDSTIIYVGEKGAAQRRLHVYGDAGHGS FT APYNKDSAIATIGEVARRIAAFEPEVSTDDIWHGFIDAFRFDPTTTAALRDGTGYEHLG FT DLAAFGHAISHLTIAQTVLRAGQAINVLPSHAWLDMDIRTLPGHDDAYVDDLLTQVLGD FT LAPHVTIEHLICEPATISPTDTPLYRTLAEVLHDSFPDTTVIPMIAPGGSDLRFARRMG FT GNGYGFAVHAPDRTLGHVHGQLHSHDEYLHLEDLRLTVAGYQQLVEKFL" FT misc_feature complement(85158..86255) FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40" FT CDS 86342..87394 FT /transl_table=11 FT /gene="bioB" FT /locus_tag="DIP0105" FT /product="biotin synthase" FT /EC_number="2.8.1.6" FT /note="Similar to Corynebacterium glutamicum biotin FT synthase BioB SW:BIOB_CORGL (P46396) (334 aa) fasta scores: FT E(): 2.7e-103, 80.18% id in 328 aa" FT /protein_id="CAE48610.1" FT /translation="MIIARIFGHLPIATTWEHHVTDILELARTKVLNNGEGLNKEEVLQ FT VLQLDEARIPELLELAHEVRLKWCGEEVEVEGIISLKTGGCPEDCHFCSQSGLFESPVR FT SAWLDIAGLVEAAKQTQKSGATEFCIVAAVKGPDERLMSQLEEAVAAIKSEVDIEVAAS FT IGILTQEQVDRLKAAGVHRYNHNLETARSYFPNVVTTHSWESRRETLRMVGEAGMEVCS FT GGIIGMGETLEQRAEFACDLAELNPTEVPMNFLDPRPGTPFADYEVLDTTDALRAIGAF FT RLALPKTILRFAGGRELTLGDLGTEQGLLGGINAVIVGNYLTTLGRPMEQDLDMLGKLR FT LPIKALNASV" FT misc_feature 86447..87367 FT /note="HMMPfam hit to PF01792, Biotin synthase" FT CDS 87394..87654 FT /transl_table=11 FT /locus_tag="DIP0106" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 8.6 kDa protein Rv1590 or MT1625 or MTCY336.14c TR:O06600 FT (EMBL:Z95586) (79 aa) fasta scores: E(): 4.1e-11, 67.24% id FT in 58 aa" FT /protein_id="CAE48611.1" FT /translation="MATHAQSTELLEALLAGEAPRFQPNTGQELVDDIEIALSPSARAG FT LEAPRFCQICGRRMIVQVRPDGWEATCSRHGSVDSAYLGRR" FT repeat_region 87565..87840 FT /note="repX" FT stem_loop 87688..87749 FT /note="Score 50: 18/19 (94%) matches, 0 gaps" FT misc_feature 87984..92600 FT /note="Anomalous G+C content (56.29%). DtxR-regulated FT operon siderophore-dependent iron uptake system. Not FT present in C.glutamicum" FT misc_feature 87987..88006 FT /note="DtxR-regulated promoter/operator" FT CDS 88041..89228 FT /transl_table=11 FT /gene="irp6A" FT /locus_tag="DIP0108" FT /product="Ferrisiderophore receptor Irp6A" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae ferrisiderophore receptor Irp6A FT SWALL:Q8VVA8 (EMBL:AY061890) (395 aa) fasta scores: E(): FT 8.7e-146, 97.46% id in 395 aa" FT /protein_id="CAE48612.1" FT /translation="MRLSRKITAVAVAIAASGAALTACSNTSDTATDASATGSSAALTV FT TDVAGRTVEFDKQPERVLLGEGRAMFAASILDKENPGEHIVALGEDLHQGAPSFEAKLF FT EAHPEIKDIPVIGHIAKGNVSVENLLAFNPDVVVMTLDHKKAAEQNGFLAKMDQAGMKY FT VFTDFRQKPLENTTKSVEVLGAVLGEQDKAKEFNEFYTKKRDDIIARAKKLENKPRTLL FT WRAAGLKDCCNTVKNSNLGDLVNAAGGVNIGDTLIDTESGDLTAEKVIAEQPEKIIATG FT GAWAKDPKKPEVLPHVELGYTATDDVAERTLEGLLKTPGFSALEAPKKGDLHAVFHQFY FT DSPYNIFALEQFAQWLHPEEFKDLDAVKDFQEFHKKWMPFEFSGVFFVTDKVEAK" FT misc_feature 88281..89057 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT CDS 89229..90272 FT /transl_table=11 FT /gene="irp6B" FT /locus_tag="DIP0109" FT /product="Membrane protein permease Irp6B" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae membrane protein permease Irp6B FT SWALL:Q8VVA7 (EMBL:AY061890) (347 aa) fasta scores: E(): FT 1e-116, 98.27% id in 347 aa and similar to Rhizobium FT meliloti putative iron ABC transporter permease protein FT SMB21430 TR:CAC49658 (EMBL:AL603646) (356 aa) fasta scores: FT E(): 1.6e-55, 50.87% id in 342 aa and to Corynebacterium FT diphtheriae HmuU SWALL:Q9XD88 (EMBL:AF109162) (350 aa) FT fasta scores: E(): 2.1e-36, 40.66% id in 332 aa" FT /protein_id="CAE48613.1" FT /translation="MSNVVEQYHKRSRRKLLAIVILTVLAIAAFVVATVVGPVNLTPAT FT MLKGIIQPDSVDPTTRTVLWNLRLPASVMAVLIGAALSLAGAHMQTILDNPLAEPFTLG FT ISAAAAFGGAASIVLGWVLIPHAQFNLAAVAWASSLVAVVIVAGASVWRGAGAESMILL FT GIALVFLFQALLSLMQYRATTEALQQIVFWTMGSLQRATWTANAIIAVMLAIAIPYTVV FT NAWRLTALRLGDARAAALGINVTRLRVVTLVVASLLAASAVAFAGIIGFIGLVGPHVAR FT ILVGEEQRFFAPASMAAGAFLLATAHAVSITMIPGVALPISIITALVGVPFFVILVFTR FT RRAMWGS" FT misc_feature 89229..89351 FT /note="Signal peptide predicted for DIP0109 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.560 between residues 41 and 42" FT misc_feature order(89274..89342,89421..89489,89526..89594,89622..89690, FT 89709..89777,89835..89903,89982..90050,90093..90161, FT 90174..90242) FT /note="9 probable transmembrane helices predicted for FT DIP0109 by TMHMM2.0" FT misc_feature 89337..90245 FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature 89688..89735 FT /note="ScanRegExp hit to PS00012, Phosphopantetheine FT attachment site." FT misc_feature 89847..90014 FT /note="ProfileScan hit to PS50281, Binding-system dependent FT bacterial transporters (araH, livH/limM families);" FT CDS 90274..91032 FT /transl_table=11 FT /gene="irp6C" FT /locus_tag="DIP0110" FT /product="ATP-binding protein Irp6C" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae ATP-binding protein Irp6C FT SWALL:Q8VVA6 (EMBL:AY061890) (252 aa) fasta scores: E(): FT 1.4e-79, 99.6% id in 252 aa and similar to Escherichia coli FT iron FecE or B4287 SWALL:FECE_ECOLI (SWALL:P15031) (255 aa) FT fasta scores: E(): 5.7e-19, 37.64% id in 263 aa" FT /protein_id="CAE48614.1" FT /translation="MSLSISDLRVSYGHGPRMRHILNGVSFGPVPLGTVTGLLGPNAAG FT KSTLIKAIAGLKATSGGTRTIMSKGAEVPHHELRNVVGYVPQDLLTSASLTAFESILVS FT ARKGYDPLLSSGAVMERLGITALADRYVSELSGGQRQLVAVAQMLVRQPEVLLLDEPTS FT ALDLRHQVELLKLLRAEVNSRDCLAVVALHDLNLAARYCDHLVVLSGGHVIAEGAPTQV FT LTSDLLEQVYGLRARVLDDAGVPVVCPVED" FT misc_feature 90367..90906 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 90370..90906 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 90376..90441 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 90391..90414 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 90676..90720 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 90676..90894 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 91122..92600 FT /transl_table=11 FT /locus_tag="DIP0111" FT /product="Putative lipoprotein" FT /note="Similar to Corynebacterium glutamicum ATCC 13032 FT hypothetical protein CGL1283 SWALL:BAB98676 (EMBL:AP005278) FT (581 aa) fasta scores: E(): 1.8e-63, 45.63% id in 504 aa" FT /protein_id="CAE48615.1" FT /translation="MRLLKPALVLAIVAGMTLSACGSDSATKDISVAGSELSLDKTALV FT ADSSGVEVSQAFFPDADKVDSVVVAGSTAQHRWEGAQEAIKRGVPLLVDDSSNTEAINA FT EIERLGVKDVVRIGDPAADAQQVAANAAAKKQHTEDVMARQITELSAEHGHLDGGAAVL FT VSKATSAASVATAKASGATVEYLSSGDPRESATLQKDAHAKVVGLGPSFSNQERFHRAV FT DMLQGPEVPGGGHLIFPEHRLVALYGHPSGGALGVMGEQPAPEAVAKVKELTEHYAAID FT PQTTTVPAFEIIATVASADPGPDGNYSNEVTIDELRPWVDEIGKAGGYAVLDLQPGSAN FT FLDQAKQFEELLKLPHVGLALDPEWRINPGEKPMERVGSVEAAEINSTAEWLAGLVRDN FT NLPQKPFVVHQFQWQMIRDREQLNTTAPELAWILHADGHGPARDKFATWEMVQQDLQPE FT FTMAWKNFIDEDTPMFTPEQTMDIYPRPGFVSYQ" FT misc_feature 91122..91196 FT /note="Signal peptide predicted for DIP0111 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.257 between residues 25 and 26" FT misc_feature 91122..91337 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT CDS 92618..93025 FT /transl_table=11 FT /locus_tag="DIP0112" FT /product="Conserved hypothetical protein" FT /note="Similar to Bacillus subtilis YdhG protein TR:O05499 FT (EMBL:D88802) (135 aa) fasta scores: E(): 2.3e-20, 41.46% FT id in 123 aa" FT /protein_id="CAE48616.1" FT /translation="MATRIAEPGEPIIEFFADWLDGISNPTNRAIAERILAWVHEEFPD FT LGYRFAWKQPMFTHHGTFIIGFSPATNHISFAPERAGIVKWEPQLKQRGLSYGKMMVRL FT PWDQPIPFDLLRDVIAFNIDDKRDVTSFWRK" FT CDS 93040..94380 FT /transl_table=11 FT /locus_tag="DIP0113" FT /product="Putative riboflavin biosynthesis protein" FT /note="Similar to Streptomyces griseus FT deoxyribodipyrimidine photolyase Phr SW:PHR_STRGR (P12768) FT (455 aa) fasta scores: E(): 3.5e-36, 36.75% id in 468 aa, FT and to Escherichia coli deoxyribodipyrimidine photolyase FT PhrB or Phr or B0708 SW:PHR_ECOLI (P00914) (472 aa) fasta FT scores: E(): 9.9e-32, 34.01% id in 488 aa" FT /protein_id="CAE48617.1" FT /translation="MARSVVVWFRDDLRVHDNPALMKAWELVRANPADLHAVYIANEVG FT VRPLGGAVKWWLHHSLLALSEQLAQRGVRLHVLSGDPLTLLPQLVTSCGATAVTMNRRY FT DPAARSIDDAFVADASAHDVEVYDFPCHLLAEPGEITTTTGGSYKVFTPFSRNLRDAIG FT DLPLDTLAAPPKAEQPIDDTETQAAIADLGWDAWWAASISKAWTPGEPAAREALAELDD FT ILPRYLDDRDRPDIDGTSRLSPRLRFGELSVAEVWNHAHTSEGFRRQLMWRDFAWHRLD FT AHPDMATANIRPEFDHFPWDGGDFEAELNAWRHGRTGIALVDAGMRELWATGTMHNRVR FT MVAASLLVKNLGIHWRHGEQWFWDTLVDADPASNPFNWQWVAGSGDDAAPYFRIFNPDT FT QARRFDPDGTYRTRWLPIMSADYPEEAIVDLKESRLRALDAYNACKR" FT misc_feature 93052..94287 FT /note="HMMPfam hit to PF00875, DNA photolyase" FT misc_feature 93466..93516 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT misc_feature 93871..94287 FT /note="BlastProDom hit to PD004390, PD004390" FT misc_feature 93988..94038 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT misc_feature 94048..94104 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT misc_feature 94165..94209 FT /note="FPrintScan hit to PR00147, DNA photolyase signature" FT CDS 94403..94822 FT /transl_table=11 FT /locus_tag="DIP0114" FT /product="Putative membrane protein" FT /note="Similar to Staphylococcus aureus subsp aureus N315 FT hypothetical protein SA2163 TR:Q99RQ4 (EMBL:AP003137) (143 FT aa) fasta scores: E(): 2.4e-15, 39.16% id in 143 aa" FT /protein_id="CAE48618.1" FT /translation="MRKLYYASLTYLILGLVAGVFYREWTKVFNAVDRSQLNTLHTHLL FT VLGTFFFLIVLALDKMFHLSGQKKFQQWFIFHNVALAWTTLAMLANGIVATSGGMWGPA FT QSGIAGMGHILLTGGFIWFFSMLNTAIKRSEANQK" FT misc_feature order(94415..94468,94511..94579,94616..94684,94727..94795) FT /note="4 probable transmembrane helices predicted for FT DIP0114 by TMHMM2.0" FT CDS complement(94809..95876) FT /transl_table=11 FT /locus_tag="DIP0115" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 39.2 FT kDa protein SCH24.21c TR:Q9X8T5 (EMBL:AL049826) (360 aa) FT fasta scores: E(): 5e-111, 79.49% id in 356 aa" FT /protein_id="CAE48619.1" FT /translation="MSAIRVAIAGVGNCASSLVQGVEYYKDASPDQQVPGLMHVQFGDY FT HVGDIEFVAAFDVDRAKVGLDLSEAINASENCTIRICDVPETGVTVQRGPTLDGLGKYY FT RATVEESPAQAVDVVQVLKDERVDVLVSYLPVGSEEADKFYAQCAIDANVAFVNALPVF FT IASDPQWAAKFEEAGVPIVGDDIKSQVGATITHRVLAKLFEDRGVHLDRTMQLNVGGNM FT DFKNMLERERLESKKISKTQAVTSNLDQEIAARDVHIGPSDYVGWLDDRKWAYVRLEGT FT AFGDVPLNLEYKLEVWDSPNSAGIIIDALRAAKIAKDRGIGGPVYPAAAYLMKSPPRQM FT RDEAARAELEQFISG" FT misc_feature complement(94812..95867) FT /note="HMMPfam hit to PF01658, Myo-inositol-1-phosphate FT synthase" FT CDS complement(96123..96881) FT /transl_table=11 FT /locus_tag="DIP0116" FT /product="Putative membrane protein" FT /note="Similar to Rhizobium loti MLR6622 protein TR:Q988S0 FT (EMBL:AP003009) (231 aa) fasta scores: E(): 1.4e-25, 40.99% FT id in 222 aa" FT /protein_id="CAE48620.1" FT /translation="MTQKNFPPLPGTLSSTGQAIDPVAVSGLNSKLNWLRAGILGANDG FT IVSISALLLGVIATNASTSTVLLSGVAATIAGAVSMALGEFVSVSAQRDNEHKVMEQEY FT NELLHAPGEERAEIAGILENYGMSTATAYRAAIEIGRNDPFRAHLQIEYGIDPHDLTSP FT LHAAVSSAASFLLGALLPLLTVFLIPDLSRVAGAIAVTAVTLLALAITGYVSAHIGGTS FT PVKSVLRLTIGGILGLALTFGAGYAFGAVA" FT misc_feature complement(order(96135..96200,96231..96296,96318..96383, FT 96618..96683,96705..96770)) FT /note="5 probable transmembrane helices predicted for FT DIP0116 by TMHMM2.0" FT CDS complement(96976..97758) FT /transl_table=11 FT /locus_tag="DIP0117" FT /product="Putative lipase" FT /note="Similar to Streptomyces coelicolor putative secreted FT lipase SCI11.24c TR:Q9S295 (EMBL:AL096849) (290 aa) fasta FT scores: E(): 6.8e-20, 33.18% id in 223 aa, and to FT Pseudomonas sp lipase precursor Lip SW:LIP_PSES5 (P25275) FT (364 aa) fasta scores: E(): 5.6e-05, 28.4% id in 176 aa" FT /protein_id="CAE48621.1" FT /translation="MAVVQHHLPLSARLPARGIFEDDWRDRPSKRHPYPVILIHGTGVT FT KGDWMELGHALRSLGYAVWAPDFGMRSTAAVAESAAQVGAYIDAVLTVTKAKKAIVVGH FT SQGGILARYWMHNLDGANKVSHLISLAVPHHGTSHGGMMSPLGRTPRGTAVIDSLITGF FT FGASGFEMLHDSELIAQLNEHGDTLPYVYYSCIATRSDTIIQPVESCFLHGKLVRNIYA FT QAVSKHAIILHEDMPHDPRVRRLVIAEIERVERLTIPS" FT misc_feature complement(97021..97662) FT /note="HMMPfam hit to PF01674, Lipase (class 2)" FT misc_feature complement(97399..97659) FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT CDS 97855..98433 FT /transl_table=11 FT /locus_tag="DIP0118" FT /product="Putative dehydrogenase" FT /note="Similar to Thermus aquaticus NADH dehydrogenase Nox FT SW:NOX_THETH (Q60049) (205 aa) fasta scores: E(): 3.2e-07, FT 34.18% id in 196 aa" FT /protein_id="CAE48622.1" FT /translation="MSLTVAEAIAQRRAVRTYTDQPIPDDILDRVVAQALEAPTAFNAQ FT RADVVVVRDQAVKDALFAASKQAQLRDAPAVLVIVARADAPTDLPELLGPDRAAYANGF FT FARLDAAALRETALKDAMLVAGFALIAAQGEGLATSPTTGWDESQVLEAVGLGGRDDRA FT VGLVIAMGYPAEQPLHPGREASRRVNDHY" FT CDS complement(98438..100177) FT /transl_table=11 FT /locus_tag="DIP0119" FT /product="Conserved hypothetical protein" FT /note="Similar to Deinococcus radiodurans ATP-dependent DNA FT helicase RecG-related protein DR2199 TR:Q9RSC6 FT (EMBL:AE002053) (596 aa) fasta scores: E(): 8.9e-13, 24.04% FT id in 445 aa" FT /protein_id="CAE48623.1" FT /translation="MFMEVSLTSLPAHVMNALDAIWEGSIADSLESETLEFKEDPSCAG FT RGKQHGNPQAALIEKLIDEAVCLANGDAGTGHIVVGIKDKIGGPEAFTGTTFDTEKIAK FT KIFDGTRPNLRPEVHEVRYQNNRLIVIYIPEALSLYSRSKGQTSKRVGSHCEPLSEEQR FT RAIAATRAHADYSNGISEFNVDDIAADTIQEVRRLLKTKRAQSGIDTSLPTTTNGLLRE FT LGLIDNYGALKRAGAILLLPAPEGQLSIRHFWRSFPGIDPEVTDYNQPLLIALSSLKRR FT ITENANKEIKRIQFSDGQEIAVSAFPQTAVDEVVTNAIIHRDWRLSRPVVIDQSPQTLK FT VWSPGSLPVGVTPNRLLTTQSIPRNSRLMSAMRMLGLAEESSRGFDRIWAALLGSGRDI FT PDVHTEDTFVEVILHSGNPDESFIKALHELSLSFNPDMLHSVNTLIVLWHLWTSPVISL FT KQARVKTQTSSKEATELMFALESNGLLTQIHNTDEWFLSEKARKTTNYYQSETIPQSSV FT QTWVEEKLSSGSPISAAEIAESIGMPRPEITEILRNLRRAGKAHIDPSGPQRGSGTRWI FT KGT" FT misc_feature complement(98522..98587) FT /note="Predicted helix-turn-helix motif with score 1072 FT (+2.84 SD) at aa 531-552, sequence ISAAEIAESIGMPRPEITEILR" FT repeat_region 100366..100422 FT /note="Possible inverted repeat" FT repeat_region complement(100367..100989) FT /note="repX" FT CDS join(<100495..100545,100547..>100591) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0120" FT /product="Putative transposon (pseudogene)" FT /note="Pseudogene. Highly similar to the N-terminal region FT of Corynebacterium xerosis and Corynebacterium striatum FT hypothetical 20.7 kDa protein TnpCX TR:Q46485 (EMBL:U21300) FT (190 aa) fasta scores: E(): 0.057, 63.41% id in 41 aa. FT Presents a frameshift at residue 17" FT CDS <100588..100722 FT /transl_table=11 FT /locus_tag="DIP0121" FT /product="Putative transposon (partial)" FT /note="Similar to parts of Mycobacterium smegmatis TnpA FT protein TR:Q50440 (EMBL:M76495) (413 aa) fasta scores: E(): FT 0.8, 44.44% id in 36 aa" FT /protein_id="CAE48625.1" FT /translation="MSALIDTLVGMKDAVVAEIVQLGRTMNKRRKGILAYIRHTINAL" FT repeat_region 100929..100985 FT /note="Possible inverted repeat" FT CDS 101238..101792 FT /transl_table=11 FT /locus_tag="DIP0122" FT /product="Putative siderophore binding protein" FT /note="Similar to Streptomyces coelicolor putative FT siderophore binding protein SCBAC36F5.26 TR:CAC42862 FT (EMBL:AL592292) (178 aa) fasta scores: E(): 6.3e-25, 48.48% FT id in 165 aa" FT /protein_id="CAE48626.1" FT /translation="MTGPLILPFNGKVPRVHETAFIAPNATLIGDVTIGPYASVFYGCV FT LRADINSIVVGARTNIQDNSVLHVDRDAACVLGDDVTVGHMALVHGSTVGDGTLVGMHA FT ALLSRSVVGAGSLIAAGAVVLEGQVIPVKSLAAGVPAKVRRELSDEQSAGFIPHAGRYV FT EVAVQHGELGAPLSVEDVRFR" FT misc_feature 101292..101345 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 101391..101444 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 101508..101561 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 101562..101615 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT CDS complement(101789..102787) FT /transl_table=11 FT /locus_tag="DIP0123" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 46.1 kDa protein Rv0485 or MT0503 or MTCY20G9.11 FT SW:Y485_MYCTU (Q11151) (438 aa) fasta scores: E(): 1.4e-12, FT 32.14% id in 224 aa" FT /protein_id="CAE48627.1" FT /translation="MPNRRTLRNTPSFTKPTSPAASCLHLIRHLQPVTRATLVNGSGKS FT QPTVTRAVAALMEAHLVRERPDLSIPQGPGRPTIPIELAPSPWVHIGVAVGTRATYIGA FT YNTRGIALREKMIEIRPASTSIDTYIDAITTAITELTTLSELPLASIGISSSGRVSPTG FT LVTAANLGWDRLDIVSALYKRIPVPIAVTSVITAIAGAEQQAQDPNHPSTTLIFYADDS FT TGAALQTPDSITTVPIDTSSEDVALLSEAAVHLVAEHAPNSIVLAGSAFSNPDDARTVG FT KALRSSPTNPNIEIRVFPTHLDNARAAARAVALDHLIEDPLGLAKRILASC" FT CDS 103155..104525 FT /transl_table=11 FT /locus_tag="DIP0124" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCBAC19F3.14 TR:CAC44337 (EMBL:AL596102) FT (517 aa) fasta scores: E(): 3.6e-47, 37.96% id in 453 aa" FT /protein_id="CAE48628.1" FT /translation="MVATYTPSAEKQEASTRALPRHLRRLHFFAGIICAPLIFIASLTG FT LGYAFGPSLDKAVYSEAINVTPSGDELPLERIVDIARATHPDLELAGVRVGNPDQATRV FT MFNDPTLPKSTTQAVFVNQYTGDITGDMPQYGGSAALPIRHWLSLGHRDLWLGEPGRLY FT SETAASWLGVLAVSGVYLWWKRQRKAGRLAAMLRIDGRGRTRNLRWHGAIGTLVAAGMI FT FLTITGLTWSSVAGDNIRSVRTALNWTTPSVSTALGAAAEQTPADPHAEHGGHSGHHAH FT MAALDVSEQAQRVATTAAGELRTPFTVKPPKEDGHAWTAAEDRVAYRLTYDALAVDGSN FT GQVTDRVDFEQWSLPTKLTAWLIELHMGTLLGVPNQIALGLLAIGLLILVVRGYLLWFQ FT RRGTAWVGSAPARSVDGVRGYGALGWIGVAAMVIYGVVAPLFGVTCVAFLICSMLKK" FT misc_feature order(103236..103304,103650..103703,103779..103847, FT 104280..104348,104409..104504) FT /note="5 probable transmembrane helices predicted for FT DIP0124 by TMHMM2.0" FT stem_loop 104526..104619 FT /note="Score 60: 20/20 (100%) matches, 0 gaps" FT CDS 104676..105761 FT /transl_table=11 FT /locus_tag="DIP0125" FT /product="Conserved hypothetical protein" FT /note="Similar to the C-terminal region of Pseudomonas FT aeruginosa hypothetical protein PA4923 SW:YDC3_PSEAE FT (P48636) (195 aa) fasta scores: E(): 3.3e-27, 44.97% id in FT 189 aa" FT /protein_id="CAE48629.1" FT /translation="MSFSPELPDFMQGLGVSVHAMTNADVPAHTDSVLRNLNRFEQHFT FT ADDLAVVPLSEYTFFNEGRGDIGIVVQDASGAVVGTMCVQFIKGLAYLNPAVPEMTLRL FT DEAWRGKGIGGWLIEQATEYGRLNGWPGIAVNVEKQSPARRLYARHDFAAQDREVEYGA FT IMLKTLSPKIRSVAVYCGSAVGERPEYAQAARELGTALAQRGITMVYGGGRPGLMGIAA FT DAAIAAGGKVHGVMPHALVDLEQAHPGLSALDITDTMAQRKTRMEELADAFVVLPGGMG FT TMEEMFQVLVRQQLGPYAGPVALMNIEEFWDPFIAALRTMSEEGFISERYIDALVMAKD FT SEELFQGFSSWVNPGLKWLSD" FT misc_feature 104883..105134 FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family" FT CDS 105773..107386 FT /transl_table=11 FT /locus_tag="DIP0126" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SCBAC36F5.07 TR:CAC42843 FT (EMBL:AL592292) (562 aa) fasta scores: E(): 3.6e-40, 35.62% FT id in 553 aa" FT /protein_id="CAE48630.1" FT /translation="MNSPRIPSVLDASCEAYVYDLAAISPTDATAWGISGYDDQLQDFS FT PAYWEKVADQHRKLLNAIPAEDTLDSVDRVTAAVLRDRLGVELDIDAAGDNLAKLNNIE FT SPVQTIRDTFLLMPQDTDEQRDAIAARLTHLPRALAGYKESLQVAAAAGRVAAARQVQC FT VIEQLTELTQPQSMLTQLGVSGAAVEHAQAACGEMAQWLRTELLPKAPAEDAVGRERYQ FT RLSHLFVGDVVDLDDAYLWGQECLREIVDKQEAIAAELYGAGTSVADAMKRLDTEERYT FT IHGVDALQQWMQNQADRVIADLNGTHFAIPEPVRTIEAKIDPAGTGGIFYTPPSDDFTR FT PGRMWWSVPAGQEEFHTWQELTTVFHEAVPGHHLQCGQATCERDNLNLWRRVACWNSGH FT GEGWALYAEQLMAELGYHDDPGTMMGMLDAQRLRAARVVLDIGVHLRKTTPDGGVWDAA FT YAWDFLRANVAMDEKNLAFELDRYLGWPGQAPSYALGQRLWQDLRDSAVAQGMTLPEFH FT SRALALGSIPMSILRREILR" FT CDS 107390..107860 FT /transl_table=11 FT /locus_tag="DIP0127" FT /product="Putative MarR-family regulatory protein" FT /note="Similar to Streptomyces coelicolor putative FT regulatory protein SCE50.15 TR:Q9L048 (EMBL:AL163672) (168 FT aa) fasta scores: E(): 3.3e-18, 41.89% id in 148 aa" FT /protein_id="CAE48631.1" FT /translation="MISTPPVARNIMRCMSDQLKLDQQICFQLYTGSRLMQRMYRVYFD FT QWGITYSQYLVLLLLWEKDRQTISELSDPLDLDSGTLSPLLRRMEANGFITREHEQSDY FT RKVVVCLTTRGRRLKTKAKKMNDELNDMLGFDDADLAAVTRVLEKINPSAAI" FT misc_feature 107513..107809 FT /note="HMMSmart hit to SM00347, helix_turn_helix multiple FT antibiotic resistance protein, DNA-binding" FT misc_feature 107534..107839 FT /note="HMMPfam hit to PF01047, MarR family" FT misc_feature 107585..107635 FT /note="FPrintScan hit to PR00598, Bacterial regulatory FT protein MarR family signature" FT misc_feature 107636..107683 FT /note="FPrintScan hit to PR00598, Bacterial regulatory FT protein MarR family signature" FT misc_feature 107693..107743 FT /note="FPrintScan hit to PR00598, Bacterial regulatory FT protein MarR family signature" FT CDS complement(107838..108890) FT /transl_table=11 FT /locus_tag="DIP0128" FT /product="Putative membrane protein" FT /note="Similar to Escherichia coli AbrB protein or B0715 FT SW:ABRB_ECOLI (P75747) (348 aa) fasta scores: E(): 3.6e-20, FT 30.72% id in 345 aa" FT /protein_id="CAE48632.1" FT /translation="MAWNSSVAAKWLLVVPASAATGYVFSMLHVPAAWILGAIFVSATM FT AIVSGTELPIHKEVFNLGRGFIGILAGLPLATANPALLARYVLPGLMVTFVTLAIGIVG FT GMVLARAQPLLSQETGILSMLAGGASVMPVLAQDLGADFRYVALSQYLRLVAVSMSLPL FT VAHMIAPTGLDHVVTPRDDQPWWALALVCVIAVVGHRLAAVLRIPVPSILGPLLLIVAA FT SAVLPHVDFTPPMVVRIFAFLCIGWMCGGGLSVAALKFFARQVPATMIFIVVLLGGCAL FT TAWPLAATMGVDYFDAYLATSPGGLETVLALASEGGAGPIVVAVQIIRLLCVLLLAGWL FT PQLIRLLRRG" FT misc_feature complement(order(107871..107936,108015..108080, FT 108117..108182,108213..108263,108279..108335, FT 108381..108437,108564..108629,108645..108710, FT 108726..108791,108804..108869)) FT /note="10 probable transmembrane helices predicted for FT DIP0128 by TMHMM2.0" FT CDS complement(108895..109479) FT /transl_table=11 FT /locus_tag="DIP0129" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48633.1" FT /translation="MGVLSFVRLLRPVSVVRGYTLRSEVTKLVEVSTVRLTTVCQATVT FT TTAIATAVALGVCGCSSAGSVQQAAPETIQPGGYVVALSSDVDLACDFTPAQAQCSPLQ FT FVTTWKNTEGAHEQATTVVMQAEPFAVTATGKQPPVRDQGFARLGKEHRYVVGDPQSGW FT TIDASAPDSIKISRPDGKGVVITQDSYEAVN" FT CDS 109478..110248 FT /transl_table=11 FT /locus_tag="DIP0130" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor hypothetical 26.0 FT kDa protein SC7A8.24c TR:Q9L2D4 (EMBL:AL137187) (260 aa) FT fasta scores: E(): 1e-34, 42.8% id in 257 aa" FT /protein_id="CAE48634.1" FT /translation="MDLGLSGWAILTFGAAAAGWVDAVIGGGGLILIPLIMAVAPGLLP FT ANALATNKFAAVTGTFSAAVTLVRKVGVDTSLALRMIPVAAVGSGLGALMAASISKDVM FT RPIVIILMLIAGLFVALRPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGMFLI FT MAFTALLSQDFIRSAALAKVINTATNIGALCVFIAAGHILWKLGIILAIANVAGAQLGA FT RTVLGGGTRLLRAALLTLVVVMSIYLAQQQWFNG" FT misc_feature order(109487..109540,109559..109627,109706..109774, FT 109793..109846,109889..109987,110045..110113, FT 110171..110224) FT /note="7 probable transmembrane helices predicted for FT DIP0130 by TMHMM2.0" FT misc_feature 109556..109837 FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81" FT misc_feature 109892..110224 FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81" FT CDS complement(110238..112583) FT /transl_table=11 FT /locus_tag="DIP0131" FT /product="Putative ATP-dependent helicase" FT /note="Similar to Escherichia coli ATP-dependent helicase FT HrpB or B0148 SW:HRPB_ECOLI (P37024) (809 aa) fasta scores: FT E(): 2.6e-40, 35.09% id in 815 aa" FT /protein_id="CAE48635.1" FT /translation="MSFNLSVIGAGLPVAQSTTTLIDALRTHRMAVVQAPPGTGKTTLV FT PPIAHNVTGGRVIVVAPRRVAVRAAAHHLVQLDQSSCDQPSTHRVGYTIRGERSRGDLV FT EFVTPGVLLRRLISNPELDGVSAVVVDEVHERQLDTDLVLGMLVELRELRDDLTVIAMS FT ATVDAPHFAELLSPEHPAPIVETHAEIHPLELHYQPAAERIALSRSYMDHVCTVTQHAV FT AHFTDSALVFLPTIAAVTTAVSTLEQRTSVPVYPLHGQLTSSEQDAALRAGRQRIVVAT FT SIAESSLTVPGVRIVVDAGLSRVPKRDHARDLTGLVTTSTSQAQADQRAGRAGREGPGT FT VYRLYSAAEFQHFPDHVTPEIRSADLTQAALFLAAWGCTDPAQFPLLSAPPKQSWEQAV FT DTLRDIGALNAAGQITELGRTLATLPTDPRLGASLLHCGGGAAPTIAALSLDARGDIPR FT AIAAMSHQQRFTREVARLAGFVPDSECTPGEAIARAWPKNVARRDGDSYLMAGGSRAEL FT GVSSLSGHEWLAVAQASLTHRGSVIRSAAPISEAAAVDIIGVAERTEATLIDGSLRGTR FT IRHAGAITLSTTNVKVEGELAEQALAEGIRTHGLELFTFSDKATELRDRLRHLHEYYGE FT PWPDVDAADPTLWLGPEISALAAGTPAARIDLYPALQRLLPWPEATHLDELAPAVLELP FT NGRRARISYAGDRPVVSTKLQDCFGLLESPIVCGRPLQFHLLSPAGRPLAVTDTLDSFW FT AGPYQQVRSDMRGRYPKHPWPEDPLAIR" FT misc_feature complement(111552..112415) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(111573..111866) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(111990..112556) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(112179..112208) FT /note="ScanRegExp hit to PS00690, DEAH-box subfamily FT ATP-dependent helicases signature." FT misc_feature complement(112458..112481) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(112573..113142) FT /transl_table=11 FT /locus_tag="DIP0132" FT /product="Putative sugar acetyltransferase" FT /note="Similar to Streptomyces coelicolor putative sugar FT acetyltransferase SCBAC25F8.11c TR:CAC42146 (EMBL:AL592126) FT (193 aa) fasta scores: E(): 2.2e-24, 44.7% id in 170 aa, FT and to Escherichia coli galactoside O-acetyltransferase FT LacA or B0342 SWALL:THGA_ECOLI (SWALL:P07464) (203 aa) FT fasta scores: E(): 2.3e-21, 36.51% id in 178 aa" FT /protein_id="CAE48636.1" FT /translation="MADQRAQRWHIPVSPEITQAMARTAELVFDYNATHPAHTEELSRL FT RRLILSPASKDCTIRQPLTIEYGVNTTIGKDTFINYGVTILDTAEVTIGSQVLIGPNCQ FT LITVTHPVDNADMRTAGWEIAHPIVVGKQAWLGAGVIVLPGVTIGERAVIGAGSVVTHD FT IPDDTIAYGNPARVIRTTNPHTTYEL" FT misc_feature complement(112651..112737) FT /note="ScanRegExp hit to PS00101, Hexapeptide-repeat FT containing-transferases signature." FT misc_feature complement(112657..112710) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(112711..112764) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(112822..112875) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(112882..112935) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT CDS 113144..113884 FT /transl_table=11 FT /locus_tag="DIP0133" FT /product="Putative DNA repair protein" FT /note="Similar to Escherichia coli alkylated DNA repair FT protein Alkb or AidD or B2212 SW:ALKB_ECOLI (P05050) (216 FT aa) fasta scores: E(): 1.4e-12, 35.02% id in 237 aa" FT /protein_id="CAE48637.1" FT /translation="MAGVCGSKLMMARLVGMPDLFSDSGWGSGELPRALRPGLVHLPRW FT MGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASGTMSAYLMSLGLHWEYRTYQYVSQW FT GGVAVPPIPVEFSALAHEVLRAAAGVDDSLAAWVDSYRIDAALVNYYPPGAGMGMHQDA FT FEDSRAPVVSLSIGDSAVFRAGNGVNRQRPWQDVVLGSGDAVVFGGPSRDMFHSVVRLH FT AGTAPTRCGVSQGRINLTFRQVKL" FT CDS 113937..114524 FT /transl_table=11 FT /locus_tag="DIP0134" FT /product="Putative DNA-repair protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT DNA-3-methyladenine glycosidase I MT1248 TR:AAK45505 FT (EMBL:AE007001) (204 aa) fasta scores: E(): 8.3e-35, 52.71% FT id in 184 aa, and to Escherichia coli DNA-3-methyladenine FT glycosylase I Tag or B3549 SW:3MG1_ECOLI (P05100) (187 aa) FT fasta scores: E(): 1.5e-25, 44.88% id in 176 aa" FT /protein_id="CAE48638.1" FT /translation="MNGMDLISCDDGRVRPAWAVGDALLRHYYDYEWGAPVHSESGLFE FT RLALEGFQSGLSWRTVLQKRAAFREVFWGFDADRVACMTEADVQALLVDARLIRNRRKI FT MAVVNNARAVIDLREHGGLDEVLWSFAPAQHTPPLTVADIPSQTVESRAMAKELKRCGF FT QFVGPTTCYATMQAVGMVDDRPRGASPLLVES" FT CDS 114529..115257 FT /transl_table=11 FT /locus_tag="DIP0135" FT /product="Putative oxidoreductase" FT /EC_number="1.-.-.-" FT /note="Similar to Mycobacterium tuberculosis putative FT oxidoreductase Rv0484c or MT0502 or MTCY20G9.10c FT SW:Y484_MYCTU (Q11150) (251 aa) fasta scores: E(): 1.2e-45, FT 57.32% id in 232 aa" FT /protein_id="CAE48639.1" FT /translation="MSNQHVVNEKKIAVVTGASSGIGEAAARALAADGWHVIVAARRKH FT LLDVLAADIAGTAIELDVTSDESVAAFAAQIPRCDLLVNNAGGALGLDPIAQANLEDWQ FT WMYNTNVLGTLRVTRALLDALSSSNGLIINISSIAGIAPYAGGAGYNAAKFGVSAMDKV FT MRIEFQERGIRVAEINPGRVHTDFSLVRFKGDQQAANAVYEGKVNLTAGDIAETIRWVA FT SLPTHVNIDRLVITPQDQVI" FT misc_feature 114553..115248 FT /note="HMMPfam hit to PF00106, short chain dehydrogenase" FT misc_feature 114562..114615 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature 114577..114630 FT /note="FPrintScan hit to PR01397, FT 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature" FT misc_feature 114757..114792 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT /note="FPrintScan hit to PR00080, Short-chain FT dehydrogenase/reductase (SDR) superfamily signature" FT misc_feature 114829..114891 FT /note="FPrintScan hit to PR01397, FT 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature" FT misc_feature 114898..114948 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature 114916..114942 FT /note="FPrintScan hit to PR00080, Short-chain FT dehydrogenase/reductase (SDR) superfamily signature" FT misc_feature 114937..115023 FT /note="ScanRegExp hit to PS00061, Short-chain FT dehydrogenases/reductases family signature." FT misc_feature 114976..115035 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT /note="FPrintScan hit to PR00080, Short-chain FT dehydrogenase/reductase (SDR) superfamily signature" FT misc_feature 115021..115092 FT /note="FPrintScan hit to PR01397, FT 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature" FT misc_feature 115039..115092 FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT CDS 115518..116276 FT /transl_table=11 FT /locus_tag="DIP0136" FT /product="Putative lipoprotein" FT /note="No significant database matches" FT /protein_id="CAE48640.1" FT /translation="MRTPHRQGHTRWTKLPLVFAVGTLSVAMLAACGSDTATDTTDGSA FT GPSSPAAASATPTTADALSGRIVGAEDAPEGLTHEDFYAMFGSTEETPKDTINPPECEP FT LIFDSHTMFNWGSRARGTTAVSMYNSADGHQTAFIKIEEDAAEPVPDAGACATVTTENT FT STLGTSRTTYAIAPKELPIEGADTVVAVDQNLQGLTLDDADMSGARAGERTTVVIAQAH FT GHTITAVGTGDIPDQAITDLVNKQIHKLAS" FT misc_feature 115518..115682 FT /note="Signal peptide predicted for DIP0136 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.378 between residues 55 and 56" FT CDS complement(116460..116687) FT /transl_table=11 FT /locus_tag="DIP0137" FT /product="Conserved hypothetical protein" FT /note="Similar to a region of Corynebacterium glutamicum FT Ycg4K TR:Q9EUM3 (EMBL:AF164956) (256 aa) fasta scores: E(): FT 9.2e-09, 75.61% id in 41 aa" FT /protein_id="CAE48641.1" FT /translation="MGQARGWARKESQRRGNEHARRNAPLSHDDVIVQLTLGIWSEGRT FT ADAFAQRSITPRKPLGNQHPRTTQRPSDST" FT CDS complement(116920..117045) FT /transl_table=11 FT /locus_tag="DIP0138" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48642.1" FT /translation="MDSEKETQENDEQGRFHLPPAISLEREDVVKFNQAPDRPRS" FT CDS complement(117050..117379) FT /transl_table=11 FT /locus_tag="DIP0139" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48643.1" FT /translation="MIFVSIPKNGDGNSCWYGLALIFGVIAAILGAIALFFRSKGQELK FT LSSLEAQLVGKTEIEAMRALTESKRITLSQGRAQIQGISKFVIWGFVSLVVSLMCTVAY FT SLVGG" FT misc_feature complement(order(117056..117121,117269..117334)) FT /note="2 probable transmembrane helices predicted for FT DIP0139 by TMHMM2.0" FT CDS complement(117622..>117900) FT /transl_table=11 FT /locus_tag="DIP0140" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48644.1" FT /translation="WLCRDLVSMGPEEGEVSGKNVHQSWDSERQQWKVGREGASRASGY FT RDTESEARKWSQKLAKDSGSEWIKHRKDDGRIHQRNSYGDDPFPPRG" FT CDS 118089..118232 FT /transl_table=11 FT /locus_tag="DIP0141" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48645.1" FT /translation="MILCRHIKKSRGGSNNCQPALDENTEKVGVALPKTERYPQGFGVD FT LR" FT repeat_region 118305..118330 FT /note="Possible inverted repeat" FT CDS 118306..118980 FT /transl_table=11 FT /locus_tag="DIP0142" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48646.1" FT /translation="MGSEGRCNTFIRKRLLMASTLGPFHSLIDADKHRLTELITAGSSV FT HAAVRLLNANYRHCLNYAHHNTLITPRRQSTVVPQQRAAFLTQINNENTSIRRAAIDTE FT LSLSVAYRLARGTGQHTRRSRYQQRVDSTNLRLEYLRLRLACLSQRDAATAVGIGRRAA FT YDFDHGVSHTGSPRRRFIPNGPHAKAYNTCMTTLAARHDVIEEGRLSAPALPTRIDPYK FT TH" FT CDS join(118976..119083,119091..119708,119716..119988) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0143" FT /product="Putative transposase (pseudogene)" FT /note="Pseudogene. Similar to Mycobacterium tuberculosis FT CDC1551 IS1603, transposase MT3281 TR:AAK47622 FT (EMBL:AE007140) (344 aa) fasta scores: E(): 2.1e-42, 40.65% FT id in 337 aa. Presents frameshifts at residues 36 and 242" FT /db_xref="PSEUDO:CAE48647.1" FT misc_feature 119100..119708 FT /note="BlastProDom hit to PD002997, PD002997" FT misc_feature 119493..119711 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT misc_feature 119716..119961 FT /note="BlastProDom hit to PD002997, PD002997" FT misc_feature 119725..119952 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT repeat_region 119997..120022 FT /note="Possible inverted repeat" FT CDS complement(120068..120265) FT /transl_table=11 FT /locus_tag="DIP0145" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48648.1" FT /translation="MVRVSLFLLATPVHQDRVNFRTEIKKAITTVTKFWPDAGITADLK FT GVTIQRGQPSITIEPKKELG" FT CDS 120487..120867 FT /transl_table=11 FT /locus_tag="DIP0146" FT /product="Putative integral membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48649.1" FT /translation="MPIAAALSASVGLILLSVLCLTLPKVAMSGNIQRNSAIGIRTKET FT KKSDSAWLEGHRKATPILQATGIITLGITAILLVSSFFQAFPPLLPVVSGILAYGVLFA FT GFIAGAVVANKAAKNVNIQKGI" FT misc_feature 120487..120573 FT /note="Signal peptide predicted for DIP0146 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.536 between residues 29 and 30" FT misc_feature order(120499..120567,120679..120747,120760..120828) FT /note="3 probable transmembrane helices predicted for FT DIP0146 by TMHMM2.0" FT CDS 120867..120974 FT /transl_table=11 FT /locus_tag="DIP0147" FT /product="Putative lipoprotein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48650.1" FT /translation="MRKLSKVAIAVAITVSAACSGIAYAQTSHADQVTQ" FT misc_feature 120867..120941 FT /note="Signal peptide predicted for DIP0147 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.979 between residues 25 and 26" FT misc_feature 120885..120944 FT /note="1 probable transmembrane helix predicted for DIP0147 FT by TMHMM2.0" FT CDS join(121083..121232,121238..121303) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0148" FT /product="Conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to the plasmid borne FT Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 FT aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. FT Presents a frameshift at residue 50" FT /db_xref="PSEUDO:CAE48651.1" FT CDS 121423..121722 FT /transl_table=11 FT /locus_tag="DIP0149" FT /product="Conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical 7.9 kDa FT protein in dnaN-recF intergenic region YaaA SW:YAAA_BACSU FT (P05650) (71 aa) fasta scores: E(): 2.5e-05, 44.92% id in FT 69 aa" FT /protein_id="CAE48652.1" FT /translation="MCMQAQDVTIRDQEIKLGQFIKLANLVETGGAAKEVIAEGRVTVN FT GAVDTRRGKTLRDGDVVCIGTACARVVAGAADDDDYFDEKTANDDFDPEVWRNM" FT misc_feature 121465..121608 FT /note="HMMPfam hit to PF01479, S4 domain" FT CDS 121722..122546 FT /transl_table=11 FT /locus_tag="DIP0150" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT0934.1 TR:AAK45182 FT (EMBL:AE006980) (257 aa) fasta scores: E(): 3.3e-32, 41.96% FT id in 255 aa" FT /protein_id="CAE48653.1" FT /translation="MPAFQAEPGMPYWIDLTTSDLRKSTYFYSHVLGWEIEEFGADYHL FT ARVQGLPVAGFIKRPENHQQPDTWVTYFMTDNIAADCAEVEKLGGRVLAVPMEVRLGQM FT ALVVDNAGGLFGLIQPAGEDAFIAAGEPGTPVWHELTATTNYTKAVEFYPALFGWATAT FT MDTDGSFGYTTAQVDGGAIAGIFNAEGQFPPQVPSFWQSYLGVAEVDAAVAATVEYGGS FT VIREPWDTEFGRMAIIADSTGATVTLCEAPEPVEEGNESDSLEGIDLSQFGL" FT misc_feature 122145..122492 FT /note="HMMPfam hit to PF00903, Glyoxalase/Bleomycin FT resistance protein/Dioxygenase superfamily" FT CDS 122552..122857 FT /transl_table=11 FT /locus_tag="DIP0151" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SC10F4.36c TR:Q9F3M5 (EMBL:AL450350) FT (94 aa) fasta scores: E(): 8.6e-07, 38.2% id in 89 aa, and FT to Mycobacterium tuberculosis hypothetical 11.0 kDa protein FT Rv3204 or MTCY07D11.22c TR:O05862 (EMBL:Z95120) (101 aa) FT fasta scores: E(): 0.00013, 40% id in 95 aa" FT /protein_id="CAE48654.1" FT /translation="MGTDCSQHVPLSDLTERVLADVDTIPSGAVTTYGDIARRVGCGAR FT HVGSIMRRYGALTAWWRVVRADGTLAVADRAIEHWDRENIAHNGKRVDLSQCYYQP" FT misc_feature 122582..122824 FT /note="HMMPfam hit to PF01035, 6-O-methylguanine DNA FT methyltransferase, DNA binding domain" FT misc_feature 122642..122707 FT /note="Predicted helix-turn-helix motif with score 1011 FT (+2.63 SD) at aa 31-52, sequence TTYGDIARRVGCGARHVGSIMR" FT CDS complement(122867..123787) FT /transl_table=11 FT /locus_tag="DIP0152" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48655.1" FT /translation="MTDTSNISPEERREREEFLIGGHDRILTPEQQLEQLSTYIAAHYE FT APAKNPPWSDNPSDKDAIDTFDARLPDRITHACMLMLGSALDHTMPGVAFIDGVTTQDV FT PELGGQIIRPANPNGAWAISLHPGGWWKGSGVALDNAWRPEVAAVANLSDVTFLDLDYP FT LVPEHTLEQVIATVTTAAQWVRDNQQPTAMFAWGYSSGGALTTLTHSLWDAQALTFPHL FT DLTGLPPEVVGGISFPDAAQFPPTLMQVASNDAIAGHYPWAEEPKQVRVLEYVSEHRVS FT TPEVARQRVRDVAEFFAHQAAQHSA" FT CDS 123927..124553 FT /transl_table=11 FT /locus_tag="DIP0153" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48656.1" FT /translation="MSGISIIENAVLKPTKREVAEQWLGYFEHIGSYRFVDPDGQVGIE FT SLIGFDLDRRLVQMPVTYRSAEFDAEHTLTTMDHSVLGTRYVSNAMGDPVAVREYIRVI FT LEADNGAQRSDGKVSVLDVRGSGNREEKLTLGEVRILEATRQRAVGYVRIDGTLRGFVL FT RVPHLLVPENSPRLGHNISPMRLNGSVVMSPKTVLIAAELSWHDI" FT CDS complement(124561..126570) FT /transl_table=11 FT /locus_tag="DIP0154" FT /product="Putative endopeptidase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT endopeptidase, peptidase family M13 MT0208 TR:AAK44429 FT (EMBL:AE006930) (663 aa) fasta scores: E(): 2.9e-89, 46.97% FT id in 662 aa" FT /protein_id="CAE48657.1" FT /translation="MRLPPMLDNLTRMARMNDNQHRFALSDLYRFVNGPWLDSHVIPED FT RGVDGIFHGLRDRAEEDVHTIVMDSADSLAGKLYASFMDTEGIESAGVAALDKDLTLID FT VATVPEFVQALGALDRVGVGGPVGFWVAKDSAGDKSVAYIMQSGITLPDEAYYREESHA FT QTREAYQKHVEKMLGFLAPEQLGTTPIDAATRILALETDIAAAHWDVVQRRDAVKTFNP FT TEMAELPPQVAALLRAAGLPEHRVISMMPSYFEALESLLTPQRLDDWKLLTTWRILHSR FT AGVLTPEISRADFEFFGTTLSGATQQRDRWKRALGLAESFVGEEIGALYVERHFPESSK FT KDMLSLVSYLIEAYRERISGLSWMTPETRERALDKLDKFNAKIGYPDSWRSYAGLEFSA FT KGTDLLDNVRAGSAFAHDYELNKIGRLADRNEWVTTPQTVNAFYNPVVNDITFPAAILR FT APFYSPDADAAENFGAIGAVIGHEIGHGFDDQGSQYDGHGNLQSWWTDEDRAAFSALTD FT RLVEQFEGLVPSVLADNNPSGAGVNGRFTLGENIGDLGGLGIAVIAYRRYLADHGLDFD FT STPLAAFHAEDADPELEKTQFTGLQRLFLAWARVWRTAIRPELAAQYLAIDPHSPAEFR FT CNVIAGNVAEFYQAFDVAEDSPMWIAPEKRVTIW" FT misc_feature complement(124573..125253) FT /note="HMMPfam hit to PF01431, Peptidase family M13" FT misc_feature complement(124891..124926) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT misc_feature complement(125110..125139) FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT misc_feature complement(125110..125160) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT misc_feature complement(125185..125223) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT misc_feature complement(125239..125277) FT /note="FPrintScan hit to PR00786, Neprilysin FT metalloprotease (M13) family signature" FT CDS 126599..127231 FT /transl_table=11 FT /locus_tag="DIP0155" FT /product="Putative secreted protein" FT /note="No significant database matches. Possible secreted FT protein" FT /protein_id="CAE48658.1" FT /translation="MSHYQFRPAVTAKTWSLLALGVITALVLPALLNMVTPDVDTKTVN FT VSLGSEQEKWEMPMFKNDSSRLQCEESMSDLLTPTWDCDGATLTSMVVWGSQDQDTTLR FT RMMRLNSMIDPGDEVPILHKGGVRIISSPEMPNQVGLSLERPADDVEHTGTLFVLVDGP FT EFDSYAELVFNNLRAEEARIAGGEHEPMTLEELTKGFDKAHKGDAHT" FT misc_feature 126599..126715 FT /note="Signal peptide predicted for DIP0155 by SignalP 2.0 FT HMM (Signal peptide probability 0.974) with cleavage site FT probability 0.622 between residues 39 and 40" FT CDS 127228..128148 FT /transl_table=11 FT /locus_tag="DIP0156" FT /product="Putative membrane protein" FT /note="No significant database matches. Possible membrane FT protein" FT /protein_id="CAE48659.1" FT /translation="MSTQRAQPASISWVLWTLIGISIPVIAFFTFANFFASPIAAFLGV FT LFGLVYFAVGTALFFFSPMWPTAGWKWYFACIGWGAGASFCIVMLSAAPFTDLTDKLGW FT EAVSASFAGAYPEEIAKSLGVLLILFTFSKLTRPWHGFVTGAMIGLGFEVFENISYGVL FT GAMSDPNTDITGALYSWWIRSIAGPGLHVAFTAIAGYGIGLAVFRYGWDTLQRFLVGLC FT ALGVAFCLHFTWNLQFDSYAKQIANFIIVALILYPLMVWLWLRCHRQAKNDLGVVRMKR FT PITTIAELQRRKLATTSEESQPHAS" FT misc_feature order(127264..127332,127342..127410,127447..127515, FT 127558..127626,127645..127713,127771..127839, FT 127876..127932,127960..128019) FT /note="8 probable transmembrane helices predicted for FT DIP0156 by TMHMM2.0" FT CDS 128138..129046 FT /transl_table=11 FT /locus_tag="DIP0157" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 amino FT acid ABC transporter, amino acid-binding protein, putative FT MT3866 TR:AAK48230 (EMBL:AE007181) (343 aa) fasta scores: FT E(): 2.6e-26, 35.69% id in 311 aa" FT /protein_id="CAE48660.1" FT /translation="MRLNIRRIIAATVTAGALALSSCGSIESIEGGSHHNSDTIVVGSQ FT DYYSNEIIAEIYSQALEAKGYTVDRQFRIGQREVYVDEIESGRIDVFPEYTGPLLQHWK FT PDTEAREKTEVYQQLKEALPEHLVALDQSAATDQDSYVVTEEFAKKHHVNSIADLAEAA FT KKQPLTLGANSEAQDRPNGPKGLEKTYGVSVGFTPIEDSGGPLTVKALRDNSIQLAIIY FT SADPSISTNHLTNLEDPKGQFLASHVVTIAHDDVPLGAATVLNKVNATLTTEQLRELNA FT RSVNEQLPSSVIAKDWIKQHL" FT misc_feature 128138..128221 FT /note="Signal peptide predicted for DIP0157 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.326 between residues 28 and 29" FT CDS complement(129067..129504) FT /transl_table=11 FT /locus_tag="DIP0158" FT /product="Putative secreted protein" FT /note="No significant database matches. Possible secreted FT protein" FT /protein_id="CAE48661.1" FT /translation="MRKLTMVGITAAVVGASVIAGISGMTSRNSDHITAASLISASSEV FT RSAPADGTISEPGTYRVGNQDIRVTTTEPVILVLCGPEVASISASGPLGLSLDEDVRLG FT SLQTTGDVTLVGRGDLYIAETLSAAHVSTQTGQLVTHGVPR" FT misc_feature complement(129421..129504) FT /note="Signal peptide predicted for DIP0158 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.457 between residues 28 and 29" FT stem_loop complement(129618..129713) FT CDS complement(129730..133155) FT /transl_table=11 FT /locus_tag="DIP0159" FT /product="Putative transferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT arabinosyl transferase MT3902 TR:AAK48268 (EMBL:AE007183) FT (1098 aa) fasta scores: E(): 1.3e-49, 38.11% id in 1149 aa" FT /protein_id="CAE48662.1" FT /translation="MTKPMNTNITGIKWAAILSGVIGFVLFIITPLMPVNQVQSSVSWP FT QNGSLNSVSAPLMSYTPISFDAKIPVASVDKLRKDQDLILGTLPANSEDAGARGLFVRA FT NDDGLQITSHGELVLDLSKRELAQLPADATIAISATEDETTAGIEGDDSTTETVERDVR FT PIIMGIYTELESNAAADLLNAGLNAHVEINSRFTSSPTLAKYASMWLGGLMLLISLISL FT GMLDRRDGATDIRFLNKGFFRPRPLDAIVGAILLVWYFIGANTSDDGFILTMARASSAS FT DYMANYYRWFGVPESPFGAPYYDLLGLMSKVSTASIWMRLPSLISAIVIWLVLSREVLP FT RLGEKIAQRRVAQWTTAFVFLSFWLAYNNGLRPEPIIAAGTLLTWLSFEVAIATQRLLP FT AAIGTMLAAFTLACGPTGLMAVTAVLAGLSYLIRIVYRRLPYLNTGASKRSIAVSVMAM FT VAPFMAAGTAVFIAVFGDQTLRNVLESIHVRGDKGPALSWYNELVRYQVLMMQTVDGSF FT ARRVGVFFTFVAAALVGATILRQGKVPGTNKGPVMRLMLVMVGTLFFMMFTPTKWTHHF FT GVWAGIAAALAGVGAVALSHIALRSPRARILLTGGILFVFAFALAGPNGWWYTSSYSIP FT WWDKTIQFHGIEASTVMLLLSLVVMAAGVLVSFRKDVAEEQAEARGEDPAMVNRPFRKQ FT HFEGLAAAPIAILSIFAVAFSLASLSKGFIDQYPNYSVGLGNLRSLKGDTCNLANDVLV FT ETNTNESFLTPLTGTLGDSLTNDDVRGFDPNRISPWAFTPENRPEALGAANSTGDGSDT FT AAADSDASNTAAGADSDGSAAKADAASDNQEEAAKKKETHRADQGVNGSHSRLPFNLDY FT RTVPVLGSWTDGKQEIAEATSSWFKLPKANDNTPLVVVSAAGSIKHKDVNGIVENGQKI FT VLEYGRSNTGGSLGKAEKLGELDLLDSGIDSTWRNLRIPLSDIPDDADVIRIHAKDTSL FT DPDEWIAFTPPRVPTMDTLANQFPASTPGLLDWAVPLQFPCQRTFNHYAGVAEIPEYRI FT SADAKGKQSGMNFQDFAGGGVTGIAETINSSYELPSYSKNDWVRDWGSIKMYKLRTNSK FT GEAPDVATVDTETITRSGLWYPGRMNIDTKVTKN" FT misc_feature complement(order(131002..131067,131161..131226, FT 131272..131337,131359..131424,131455..131505, FT 131542..131607,131737..131802,131866..131931, FT 131962..132027,132139..132204,132367..132417, FT 132481..132537,133051..133116)) FT /note="13 probable transmembrane helices predicted for FT DIP0159 by TMHMM2.0" FT misc_feature complement(133036..133155) FT /note="Signal peptide predicted for DIP0159 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.802 between residues 40 and 41" FT CDS complement(133148..135232) FT /transl_table=11 FT /locus_tag="DIP0160" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 69.5 kDa protein CY13D12.26 Rv3792 or MTCY13D12.26 FT TR:P72058 (EMBL:Z80343) (643 aa) fasta scores: E(): FT 3.7e-53, 34.5% id in 652 aa" FT /protein_id="CAE48663.1" FT /translation="MSRPCAKLLSMTESAPSKHASPSGGSSQVRAQRNTTQGEASDSEL FT TSVVMYAPDQLSAKATLIAIVATIFGSSICTLGLWYLLKVVKLPPFGGSQVTKAGATVG FT IFLTLLVTCIFVLWWMADDKRGTTRPRWRTWITYAVTHMAPAGLVMAAIGVPLSPSRLY FT LEGITVDQGFRTQFLTRLTATQGLPDMNYADLPAYYPGAWFWLGARFAQLIGYPGWAIY FT QPWALLSIAVTGCVLVPVWQRLVGSLPVATAIALVTTAIALTLCAFEPYACVIAMGIPA FT ALVMGRRALSGQKLATVGVVVYLGASASTYTLYTAVIALSLVTVSGLFFAFVLRSWRPI FT RQIIVIGVSSMAIASIVWGPYLWLRFTGHYEGTAAASHFLPPEGTVVPLPMFATSFVGV FT LCFIGLIYLIMRVMDPDVCAMGVGLAVMYLWVIASMSVALSGTTLLGFRLDSVITIILG FT TAGVLGLAELRLVAVHRFYPVQFSTSLSTRINVICVVVLALAGIQYAQAIPDRNAHAIE FT LAYTNTDGDGHRADFLPPDATQYYAEVDRVIQEKTGKPAADTVVLTDEFNFLTYYPYLG FT FQAFTSHYANPLGEFEKRNAVIENWASQSWDSLKDPQDFDRAVSNVPWRSPDAFVLRAD FT STGSSDSKDGWNFNLAIDIFPSNPNVWFKGVRFNPEVFQGENSPWTVTQVGPFVVVTHD FT " FT misc_feature complement(order(133709..133774,133814..133879, FT 133910..133966,134006..134071,134132..134197, FT 134234..134299,134429..134494,134510..134575, FT 134765..134830,134870..134935,134981..135046)) FT /note="11 probable transmembrane helices predicted for FT DIP0160 by TMHMM2.0" FT misc_feature complement(133796..133846) FT /note="ScanRegExp hit to PS00237, G-protein coupled FT receptors family 1 signature." FT CDS complement(135343..136104) FT /transl_table=11 FT /locus_tag="DIP0161" FT /product="Putative oxidoreductase" FT /note="Similar to Mycobacterium leprae putative FT oxidoreductase ML0108 TR:Q9CDA5 (EMBL:AL583917) (254 aa) FT fasta scores: E(): 5.6e-50, 57.14% id in 252 aa" FT /protein_id="CAE48664.1" FT /translation="MLNAVGQAQNILLLGGTSEIGLSIVAEFLAKGPAHVTLAARQDSP FT RIDAAVAQMKAAGASEVDVIDFDATDFDKHAEVIDLAWAQGDVDLAIVAFGTLGDQEQL FT WQDQKAAVTSAQTNYTAPVSVGVLLGEKFKEQGHGTIVALSSVAGQRVRRSNFVYGASK FT AGMDGFYVNLGEALRPSGANVVVVRPGQVRTKMSADAGEAPLTVNKEDVAKATFDAVLN FT RKSAIFVHPLFEYVSLAFKFIPQAIFRKLPF" FT misc_feature complement(135364..136086) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase" FT misc_feature complement(135514..135567) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(135523..135564) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT misc_feature complement(135571..135630) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(135577..135633) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT misc_feature complement(135583..135669) FT /note="ScanRegExp hit to PS00061, Short-chain FT dehydrogenases/reductases family signature." FT misc_feature complement(135649..135693) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT misc_feature complement(135658..135708) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(135814..135849) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(136024..136077) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(136045..136080) FT /note="FPrintScan hit to PR01167, Insect alcohol FT dehydrogenase family signature" FT CDS complement(136124..137590) FT /transl_table=11 FT /locus_tag="DIP0162" FT /product="Putative oxidoreductase, FAD-binding" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT oxidoreductase, FAD-binding MT3898 TR:AAK48263 FT (EMBL:AE007183) (463 aa) fasta scores: E(): 4.2e-118, FT 67.57% id in 478 aa" FT /protein_id="CAE48665.1" FT /translation="MTTDKGTSSTAASNGASGALYTEAKKLTGWGRTAPTTAEVLSTPD FT LDVIVDAVRQVAEQNDSKPAHLKRGVIARGMGRSYGDPAQNSGGLVVDMQALNKIHSID FT PESAIVDVDGGVTLDQLMKAALPYGLWVPVLPGTRQVTIGGAIGPDIHGKNHHSAGSFG FT DHVASMELLVADGRILHLEPEGSADDPTGELFWATVGGMGLTGIIVRARIRMTKTETAY FT FIADGDLTANLDETIEFHSDGSEHNYTYSSAWFDAISPEPKLGRAAISRGSLATLAQLE FT EIAPKLAKDPLKFNAPQLVTVPDIFPSFTMNKLSMIAIGELWWLKSGTYKNKVQNLTQF FT YQPLDLIGEWNRGYGSKGFLQYQFVVPREAVEPFKDIVKDIQKSGHYSALNVFKLFGEG FT NKAPLSYPMPGWNVCVDFPIKPGLGAFLDDLDKRVMEFGGRLYLAKESRTSAENFHKMY FT PGMEGWLKTRNAIDPTGVFASDMSRRLELH" FT misc_feature complement(136979..137527) FT /note="HMMPfam hit to PF01565, FAD binding domain" FT CDS complement(137707..137955) FT /transl_table=11 FT /locus_tag="DIP0163" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48666.1" FT /translation="MFGFLRKSQPVPQPQEATSDTIATQHTSAPLSNDMMLLMAEEIPM FT LDSNSRVRVYEILEQYDGPTICSQEELPREIREMMDL" FT CDS 137984..138418 FT /transl_table=11 FT /locus_tag="DIP0164" FT /product="Putative membrane protein" FT /note="No significant database matches. Possible membrane FT protein" FT /protein_id="CAE48667.1" FT /translation="MSWGFASVCPMTNQARICRLSAALSVGLITALPDYVANKAVRWLL FT NSLIAGAGVGVVAYVNKQDEDPTNDLDVVARELIDDSQFGPAATWGLFLAVVVLLFVQR FT IDAKLTAVVTGWLRRRGVRAPHTVLGVLAAALTYAEVSKS" FT misc_feature order(138026..138094,138113..138166,138230..138289) FT /note="3 probable transmembrane helices predicted for FT DIP0164 by TMHMM2.0" FT CDS 138415..138963 FT /transl_table=11 FT /locus_tag="DIP0165" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48668.1" FT /translation="MISVIDVLSGLADNPTVVMWHVHTSPDYPTSLMSGAWVLGPAESH FT GVDSLGSLLTNTWALPLTPAAAALVPAGIPVISLDDVRAAVEAGLGEIKSVIASAKQDN FT PKLVAPRFNALPTISPDDFRAAYHGEPQAETAWSAASAVAAWMQTWLDIEQQRRSRAYL FT KDALGSSARSLPLHLLPTR" FT CDS 138975..139394 FT /transl_table=11 FT /locus_tag="DIP0166" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 13.4 kDa protein Rv3789 or MT3897 or MTCY13D12.23 FT SW:Y1I9_MYCTU (P72055) (121 aa) fasta scores: E(): 4.2e-17, FT 48.78% id in 123 aa" FT /protein_id="CAE48669.1" FT /translation="MTTTNSAAPQSVTSQGIRFIISGGISAVVDLGLTYICQILFGFSA FT AGGRTIGFIFGTLTAYLINRRWTFQAEASTKRFIQVAVLYTITYFVNVGGHALLFGLFT FT SSGLGDRVALVIAFVISQGVATVINFFVQRWFIFK" FT misc_feature order(139032..139100,139110..139178,139215..139283, FT 139311..139370) FT /note="4 probable transmembrane helices predicted for FT DIP0166 by TMHMM2.0" FT stem_loop 139418..139511 FT /note="Score 57: 19/19 (100%) matches, 0 gaps" FT CDS 139604..140383 FT /transl_table=11 FT /locus_tag="DIP0167" FT /product="Hypothetical protein" FT /note="No significant database matches. Note: Also similar FT to DIP2059 (271 aa) E(): 1e-38; 44.747% identity in 257 aa FT overlap" FT /protein_id="CAE48670.1" FT /translation="MTHGLYWQGDVNVDELAAALCRRGFVLTGVTELELLARQPLTLPL FT HVVANRRVKSTEYVVIHRSSVRKYARVADVLIELPVYAMRWLGRRQAIRLAEIAYAGRE FT GRARLERHAQGAVPVRVREIVQASVIGADSPPERDLVRALRSAGVECESNVRVGDYRWD FT IRICGSAVLIEVDGYAYHNAENRETFRLDRWKANDATLRGYLVLRYSAVCVRESLDVIV FT DQVVQAVQCAPKQLRDVDEARCWHRGAWKWMPGLAWL" FT CDS complement(140517..141434) FT /transl_table=11 FT /locus_tag="DIP0168" FT /product="Putative glycosyl transferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT glycosyl transferase MT3891 TR:AAK48256 (EMBL:AE007182) FT (304 aa) fasta scores: E(): 1.8e-71, 62.17% id in 304 aa" FT /protein_id="CAE48671.1" FT /translation="MPLSTSDNIAAVIVTHKRVELLRASLEVVAAQTHPVKWIIVVDNG FT CEDAVRDLLHSVAGDRGIYLPSHTNLGGAGGFAYGFLTALALGADAIWCADDDGRPEGP FT QVLATLIDAAVTHQLDEVSPVVCNMDDPNRLAFPLRRGLEWRRYRSELIDPNNPSDTLL FT PGIASLFNGALISAAAMERIGVPDLRLFIRGDEVEYHRRLVRSGLNFGTCLTTAYLHPD FT GSDEFKPILGGRMHTQYPASDAKRYFTYRNRGYLMNQPGMRRLLPQEYARFAWFFLIQR FT RDPRGFLEWFKLHQLGRSEKFERP" FT misc_feature complement(140898..141407) FT /note="HMMPfam hit to PF00535, Glycosyl transferase" FT misc_feature complement(141105..141413) FT /note="ProfileScan hit to PS50167, General FT Glycosyltransferase domain." FT CDS 141608..142573 FT /transl_table=11 FT /locus_tag="DIP0169" FT /product="Putative secreted protein" FT /note="Similar to Treponema pallidum periplasmic FT zinc-binding protein TroA or TroMP1 or TP0163 FT SWALL:TROA_TREPA (SWALL:P96116) (308 aa) fasta scores: E(): FT 4.2e-29, 35.27% id in 292 aa, and to Streptococcus FT pneumoniae manganese ABC transporter substrate-binding FT lipoprotein precursor PsaA or SP1650 SWALL:P72538 FT (EMBL:U53509) (309 aa) fasta scores: E(): 1.6e-19, 28.47% FT id in 309 aa, and to Streptococcus gordonii challis FT coagregation-mediating adhesin precursor ScaA SW:ADHS_STRGC FT () (310 aa) fasta scores: E(): 1.9e-20, 30.15% id in 315 FT aa. Note: Also similar to the downstream DIP0173 (333 aa) FT E(): 6.5e-38;56.061% identity in 330 aa overlap. Contains a FT putative twin-arginine translocation (TAT) system FT recognition motif (RRGFIR) at the N-terminal region" FT /protein_id="CAE48672.1" FT /translation="MSRRGFIRTAAASVAALALTGSLVACSTDSASTSATTSAANKALT FT VFATTGYIGDAVKNIAPDADVTIMVGPGGDPHTYQPTTQDISKIESSDVVLWSGLHMEA FT KMLDQLKAQGDRQAAVAEAIPEDKRLDWPEPGDNGEKLYDPHVWNSTENWKYVVDAIAK FT KLSEVDKDNAATYKDNAEKYKKEIDETAAYVKEQIDQIPEQKRILITGHDAFSYFGKQF FT GVEIHATDFVTSESEMSPAELAELGKFIAEKKIPTIFQDNLANPQAINSLKETVKAKGW FT NVEISDKELYADSLGESAPTDTYLGVLKYNADAIREALAK" FT misc_feature 141608..150356 FT /note="Anomalous G+C content (57.26%) and GC deviation. FT Putative metal transport system" FT misc_feature 141614..141631 FT /note="Potential twin-arginine recognition motif RRGFIR" FT misc_feature 141743..142567 FT /note="HMMPfam hit to PF01297, Periplasmic solute binding FT protein family" FT misc_feature 141806..141862 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 141824..141865 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 141863..141916 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 141863..141922 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 142034..142093 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 142208..142261 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 142208..142273 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 142367..142423 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 142499..142555 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT CDS 142673..143407 FT /transl_table=11 FT /locus_tag="DIP0170" FT /product="Putative membrane protein" FT /note="Similar to Bacillus subtilis probable metal FT transport system ATP-binding protein YtgB SW:YTGB_BACSU FT (O34338) (250 aa) fasta scores: E(): 5.3e-33, 45.61% id in FT 228 aa, and to Streptococcus gordonii challis hypothetical FT ABC transporter ATP-binding protein in ScaA 5'region FT SW:YSC1_STRGC (P42360) (251 aa) fasta scores: E(): 4.6e-30, FT 40.26% id in 231 aa" FT /protein_id="CAE48673.1" FT /translation="MSVPLHALPPALVMRNVSARYGSTVAVERASVVVPAGTVMGFIGP FT NGAGKSSLIKAAIDLIDRDGEVEFFGESLAACRNRVGYMPQSADVDWDYPITVRQVVQM FT GLFPRVGWFKRLSGEHKELVDASLARVGIADLAKRHISELSGGQRRRVFVARILAQQPD FT IYLLDEPFAGVDAASEKVIRGVLHELRDAGKSVVIVHHDLSTVEELCDHVTIINREVLA FT SGPVSEVFTRETVNKAFGLGLL" FT misc_feature 142778..143392 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 142781..143329 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 142787..142864 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 142802..142825 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 143102..143146 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 143102..143317 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 143404..144303 FT /transl_table=11 FT /locus_tag="DIP0171" FT /product="Putative membrane protein" FT /note="Similar to Bacillus subtilis probable metal FT transport system membrane protein YtgC SW:YTGC_BACSU FT (O35024) (435 aa) fasta scores: E(): 3.1e-22, 33.91% id in FT 286 aa, and to Treponema pallidum zinc transport system FT membrane protein TroC or TP0165 SW:TROC_TREPA (P96118) (298 FT aa) fasta scores: E(): 1.5e-21, 35.69% id in 297 aa" FT /protein_id="CAE48675.1" FT /translation="MSLIEFLSEFSFRRVVLGTMLIGLCSGAMGTFLYLRRQSMMSDVI FT GHSATPGVMGSFLLFSTVPVLAGSQLLAQWGIDARSMPVITVGALITGLASALLADKVA FT ATTRIGIDATMAVMLSLFLGGGLILLQIIQSGRYKGKGGIDELMFGNAATLTNLDVRTL FT AVVSVVILGVIVALWRPFTLLVFDPVLARMSGMPRWINGVLFVIITLGMVIGVKAVGLI FT LMIAFAVFPPAAARQWSRTALQMVVASALIGGASAVLGTYISISVGKVPTGPVIVLVLA FT AIVLVSMVLSPRRSGVSA" FT misc_feature 143428..144276 FT /note="HMMPfam hit to PF00950, ABC 3 transport family" FT misc_feature order(143446..143514,143533..143601,143644..143703, FT 143740..143808,143893..143961,143998..144093, FT 144136..144204,144223..144276) FT /note="8 probable transmembrane helices predicted for FT DIP0171 by TMHMM2.0" FT CDS 144300..145151 FT /transl_table=11 FT /locus_tag="DIP0172" FT /product="Putative membrane protein" FT /note="Similar to Treponema pallidum zinc transport system FT membrane protein Trod or TP0166 SW:TROD_TREPA (P96119) (367 FT aa) fasta scores: E(): 3.4e-27, 35.97% id in 278 aa, and to FT Bacillus subtilis YtgD TR:O34500 (EMBL:AF008220) (295 aa) FT fasta scores: E(): 2.8e-25, 35.92% id in 270 aa" FT /protein_id="CAE48676.1" FT /translation="MTFAVSVSLLALVVALTAAIPGVVLVLRRQAMLSDALSHAVLPGI FT AVGALWTTNPNSPILLIGATLSGVLVMALTEWVRGRKRVTEDSATGLIFPAFFAIGVIL FT ISTKFNRSSISEHTVLVGDLNISAMQHLVVGTIDFGPKSAWIIGAVGLLTLALLLVAKR FT PLAISTFDPVFARTVGIRTRLINYLVMTMVSLTIVVVFDAAGAVLAVALMIVPAATALM FT IASSEGAMLLVTLVVAAVSSQAGFWVAYRLDAATSPTMAFVDGLIFLAVWGIIRARRRL FT RC" FT misc_feature 144300..144392 FT /note="Signal peptide predicted for DIP0172 by SignalP 2.0 FT HMM (Signal peptide probability 0.990) with cleavage site FT probability 0.427 between residues 31 and 32" FT misc_feature 144306..145124 FT /note="HMMPfam hit to PF00950, ABC 3 transport family" FT misc_feature order(144312..144380,144474..144533,144567..144620, FT 144729..144782,144849..144902,144912..144971, FT 144990..145049,145059..145127) FT /note="8 probable transmembrane helices predicted for FT DIP0172 by TMHMM2.0" FT CDS 145272..146273 FT /transl_table=11 FT /locus_tag="DIP0173" FT /product="Putative membrane protein" FT /note="Similar to Neisseria meningitidis putative FT periplasmic binding protein NMA0789 SWALL:Q9JVL4 FT (EMBL:AL162754) (308 aa) fasta scores: E(): 2.7e-24, 31.71% FT id in 309 aa, and to Treponema pallidum periplasmic FT zinc-binding protein TroA or TroMP1 or TP0163 FT SWALL:TROA_TREPA (SWALL:P96116) (308 aa) fasta scores: E(): FT 2.5e-16, 33.12% id in 317 aa, and to Streptococcus pyogenes FT zinc-binding protein precursor AdcA or SPY0714 SWALL:Q9A0L9 FT (EMBL:AE006523) (515 aa) fasta scores: E(): 2.5e-16, 28.85% FT id in 298 aa Note: Also similar to the upstream DIP0169, FT (321 aa) E(): 4.5e-38; 56.798% identity in 331 aa overlap" FT /protein_id="CAE48677.1" FT /translation="MAATGLVAAAGCSTTDSGTSASGTSSAAKSDTLKIFATTSYIGDA FT VKNIAPDADLTVMVGPGGDPHTYQPSTADLEAMQNADAVIWSGLGMEANMIDQLRGLGD FT KQIAVAEQLPESQLLPWVEEDEHDHDHGDAHEHGHEGEDAHGHHHESQWDPHVWNSTDN FT WKLVVDQIVKKLSAADSANADTYKANGEKYNKQIDEAKAYVQAKIDTIPQDQRTLVSGH FT DAFRYFGKQFGLEVKATDFVTSDAERSANELEDLATFIVEHHVPVIFQDASANPQAVKS FT LEENVAKKGGKVKVVDKELYSDSLGADAPADTYIGALKYNADTIAEAFSSTR" FT misc_feature 145272..146261 FT /note="HMMPfam hit to PF01297, Periplasmic solute binding FT protein family" FT misc_feature 145365..145421 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 145365..145430 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 145455..145496 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 145494..145547 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 145650..145739 FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT misc_feature 146193..146249 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature complement(146333..148033) FT /note="Putative O-antigen export system" FT CDS complement(146339..147118) FT /transl_table=11 FT /locus_tag="DIP0174" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Mycobacterium leprae putative ABC FT transporter ATP-binding component ML0114 SWALL:Q9CDA0 FT (EMBL:AL583917) (272 aa) fasta scores: E(): 2.3e-60, 74.4% FT id in 254 aa, and to Xylella fastidiosa ABC transporter FT ATP-binding protein XF2568 SWALL:Q9PAF0 (EMBL:AE004064) FT (246 aa) fasta scores: E(): 1.4e-34, 45.93% id in 246 aa" FT /protein_id="CAE48678.1" FT /translation="MVSIDTYNACVDFPIFDAKSRSMKKAFLGAAGGAIGRNKDNTVVV FT EALRDVNLHLREGDRIGLVGHNGAGKSTLLRLLSGIYEPTRGSAHVRGRVAPVFDLGVG FT MDPEISGYENIVIRGLFLGQTRKQMKQKMDEIADFTELGDYLSMPLRTYSTGMRIRLAL FT GVVTSIEPEILLLDEGIGAVDAAFMAKARERLSDLVKRSGILVFASHSNDFLVQLCDSA FT LWVDHGTIRQAGPVADIVEAYEGKEAADHIRRLQARM" FT misc_feature complement(146426..146950) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(146435..146947) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(146447..146662) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(146864..146941) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(146903..146926) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(147137..147997) FT /transl_table=11 FT /locus_tag="DIP0175" FT /product="Putative ABC transport system, permease protein" FT /note="Similar to Mycobacterium leprae putative ABC FT transporter component ML0112 SWALL:Q9CDA2 (EMBL:AL583917) FT (276 aa) fasta scores: E(): 1.2e-60, 55.23% id in 277 aa, FT and to Xylella fastidiosa ABC transporter permease protein FT XF2567 SWALL:Q9PAF1 (EMBL:AE004064) (267 aa) fasta scores: FT E(): 5.2e-37, 36.5% id in 263 aa" FT /protein_id="CAE48679.1" FT /translation="MVARITNTDTTADEPSQSKTLAAAWADLVRGFSQRELWLQLGWQD FT IKQRYRRSVLGPLWITIATGVMALALGLLYSVLFKIPVAQFLPHVTVGLIMWNFIAGCI FT KEGSEVFIANEGLIKQLPSALSVHVYRLVWKQTLFLMHNMVIWVILMAIFPRPLGWDIL FT LGIPALALLIANGVWVTMFFGIVATRYRDFSPLLEALTQLLFYVTPIVWTTETLYSQGG FT AVSERAKLAMLNPLYHYMEVIRAPLIGAPIHPLNWIVVGCCTVIGLFIAMLAMRQWRFR FT VSYWV" FT misc_feature complement(147149..147916) FT /note="HMMPfam hit to PF01061, ABC-2 type transporter" FT misc_feature complement(order(147176..147241,147362..147418, FT 147440..147505,147518..147583,147689..147754, FT 147767..147832)) FT /note="6 probable transmembrane helices predicted for FT DIP0175 by TMHMM2.0" FT CDS 148133..149326 FT /transl_table=11 FT /locus_tag="DIP0176" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0117 TR:Q9CD97 (EMBL:AL583917) (398 aa) fasta scores: FT E(): 8.1e-38, 35.73% id in 417 aa" FT /protein_id="CAE48680.1" FT /translation="MAFDVARVRGAYTSITGGWTYMNAQQQAQIPERVAAAVARGFRNS FT PIVEDVEPAFGSHARERHAGLFASDGYERSARVAIADLTGTSADAVILGPNLEVLFSQF FT AAAVWPLVRRGSSVVMAHGCSPAMTVGAKTRWAQPDLGTGEIPAWQFGSLVDGSTRLVA FT LRAADPQVGTINPIREISEYVHGASRAWLLVDASSLAGHRPITMEALGADIVALDCSAF FT GGPQVAALAFRDATMFPRLDADLLNSSVAPGLAAGVSAAVDHIADLDESVRGTRRNRLV FT DSIESAGLYLGRLGTYLADSLDSLPKTHVFGVTGEAAAGSDADRIPHVTFCIDGVPADL FT IYHRLLSNRIVGALSASSPLLDAMGAEDTHGTISLALAPFNTTHDVDQLMRVVASFA" FT CDS complement(149323..150270) FT /transl_table=11 FT /locus_tag="DIP0177" FT /product="Putative quinone oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative quinone FT oxidoreductase SCGD3.24c TR:Q9XA55 (EMBL:AL096822) (326 aa) FT fasta scores: E(): 1.4e-57, 53.87% id in 323 aa" FT /protein_id="CAE48681.1" FT /translation="MRAIYVQDDATLAVHDAPTPTLQPGEVLVQVKAAGVNRADLLQAA FT GHYPPPPGESEIIGLECAGVIVDAGTTSRNVGDKVACLLAGGGYAEYVAVPEGQLMPIP FT EGYSFAEAAAVVEVAATVWSNIGMLTGLKPEHMFLIHGGAGGIGTFAIQLAKHVGATVA FT VTAGSKEKLETCRELGADILINYREEDFAEVLKNKCDRILDIMGAKYLDQNVRALAMDG FT HQVTIGMQGGVKGELNIGRLLSKRGTISATALRARDREDKARIVASTVENVWPLLADGT FT IRHHIHATLPLEQAQRAHEMLKNGEVTGKLVLEV" FT misc_feature complement(149326..150240) FT /note="HMMPfam hit to PF00107, Zinc-binding dehydrogenases" FT tRNA 150357..150441 FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:150391..150393,aa:Ser) FT /note="tRNA Ser anticodon TGA, Cove score 51.94" FT stem_loop 150507..150590 FT /note="Score 72: 28/31 (90%) matches, 0 gaps" FT CDS complement(150627..151661) FT /transl_table=11 FT /locus_tag="DIP0178" FT /product="Putative aminotransferase" FT /note="Similar to Streptomyces coelicolor putative FT histidinol-phophate aminotransferase SCD78.11 TR:Q9ZBY8 FT (EMBL:AL034355) (359 aa) fasta scores: E(): 6.9e-55, 49.85% FT id in 345 aa, and to Streptomyces tendae NikT protein FT TR:Q9F2E4 (EMBL:AJ250581) (440 aa) fasta scores: E(): FT 1.1e-42, 42.9% id in 324 aa" FT /protein_id="CAE48682.1" FT /translation="MIRKDLSQIPTYVPGKRNDHALKLSSNEVTHRPLPSAAQAMAEAA FT AGANRYPDMGVTELRGALSEHLGVPAEQIAVGCGSSALCQQLVQITCTPGDEVVFPWRS FT FEAYPIFVQVVGATPVAVPLTSDGFNDLDAMAAAITPKTKLVFVCNPNNPSGTVVRREA FT FLEFMAKVPADVVVALDEAYTEYVRDEDTIFATEILSEFPNLVGLRTFSKAFGLAGVRV FT GYAFGPHELIDALNKVALPFGVNAVGQAGALASLNNLDELMEHTEEVVAVRDRVADHIG FT AAHSQANFVWIPAESRSETPFEIAEKLAAHDVLVRAFPEGVRITVTNEEESDRLLAAWD FT ASFA" FT misc_feature complement(150633..151469) FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II" FT misc_feature complement(150978..151052) FT /note="FPrintScan hit to PR00753, FT 1-aminocyclopropane-1-carboxylate synthase signature" FT misc_feature complement(151005..151034) FT /note="ScanRegExp hit to PS00599, Aminotransferases FT class-II pyridoxal-phosphate attachment site." FT misc_feature complement(151170..151244) FT /note="FPrintScan hit to PR00753, FT 1-aminocyclopropane-1-carboxylate synthase signature" FT tRNA 151769..151857 FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:151803..151805,aa:Ser) FT /note="tRNA Ser anticodon GCT, Cove score 42.39" FT tRNA 151905..151977 FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:151938..151940,aa:Arg) FT /note="tRNA Arg anticodon ACG, Cove score 77.20" FT CDS 152426..154000 FT /transl_table=11 FT /locus_tag="DIP0179" FT /product="Putative membrane protein" FT /note="Similar to Staphylococcus aureus subsp aureus Mu50 FT hypothetical 57.2 kDa protein SAV1916 TR:BAB58078 FT (EMBL:AP003363) (520 aa) fasta scores: E(): 3.6e-71, 41.38% FT id in 505 aa, and to Helicobacter pylori sodium-dependent FT transporter HP0214 TR:O25003 (EMBL:AE000541) (552 aa) fasta FT scores: E(): 9.3e-34, 50.45% id in 555 aa" FT /protein_id="CAE48683.1" FT /translation="MSTPITHESSSHALAEDAEVHGKNENRRQFTGLFAGLILAVLIYL FT VFPESSVDMVQGVDPDGEYSYNALRITAAIAVLMGAWWMTEAIPLAATALVPLVAFPVL FT QVIPFAKISAPYASPTIFLFMGGFILALGMQRWNLHRRLALSVVLLVGTKPKQLIAGFM FT LATGFLSMWVSNTATAVVMLPIGVSVLQLTAESVGGMKAQKKFATALMLAIAYSASIGS FT LGTIIGTPPNALMVAYMAENHDIHIGFGTWMLVGVPLAIVYMAIAWLVLVSVFKPEVDS FT IPGGREMIKSELAKMGSMKFGEAATAVIFTGAALSWVFVPLLIDVFQWKVEIADAAIGL FT IASMLLFMIPADRKTGVRLTDWKTANELPWDVLLLFGGGLALSKMFSDSGLSLWIGEIA FT KGLVSLPLILLIAAIAALVLLLTEFTSNTATAATFLPIMAGVAVGIGLNANGDQNILLL FT TIPVALSATCAFMLPVATPPNAIAYGSGHVRIGDMVKGGVWLNLIGVVLVTLATYFLAI FT PVFNIVL" FT misc_feature order(152513..152569,152627..152680,152684..152752, FT 152765..152824,152915..152983,153041..153109, FT 153170..153238,153335..153403,153422..153481, FT 153539..153607,153626..153694,153707..153766, FT 153785..153853,153917..153985) FT /note="14 probable transmembrane helices predicted for FT DIP0179 by TMHMM2.0" FT misc_feature 152672..153979 FT /note="HMMPfam hit to PF00939, Sodium:sulfate symporter FT transmembrane region" FT tRNA 154077..154149 FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:154110..154112,aa:Arg) FT /note="tRNA Arg anticodon ACG, Cove score 77.20" FT misc_feature 154153..190718 FT /note="Corynephage" FT CDS 154365..154994 FT /transl_table=11 FT /locus_tag="DIP0180" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48684.1" FT /translation="MGELDTADRLLEKSKEAFALAVELYNRPTLKYHAESCSIFLCNAW FT ELMLKSYIIRKYGIDEIYYDDGDKTIALTDCLKKVFTNDKDPLRINMAELIRFRNTNTH FT FITDEYEIFYGPFLQMSVNNYADKLFELHGQSVSDLIPENHLTLAVKRGAIEPEVIRAK FT YEPHVAKKLLSLSKQAADAAGDGNSGRVAAIYETNFRLVKRQGMRI" FT CDS 155099..155371 FT /transl_table=11 FT /locus_tag="DIP0181" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48685.1" FT /translation="MNKRLKKAKVQIQFRDSKKNKFTSHDFQLFIKAYAMKGDPRFSHD FT RKASNEVNPSWTYSQQAIKHIADELIKDPEKCLDRLKFAVSKKNN" FT CDS complement(155600..156826) FT /transl_table=11 FT /locus_tag="DIP0182" FT /product="Putative phage integrase" FT /note="Similar to Mycobacterium phage MS6 Integrase Int FT TR:O55248 (EMBL:AF030986) (372 aa) fasta scores: E(): FT 1.5e-09, 26.48% id in 370 aa" FT /protein_id="CAE48686.1" FT /translation="MATVRDLWTKRNPNTTSKTKRIRSARWGVGKRWQAVWIENGREAT FT KTFETRDEAELWAARAEVGKADGTWITKDKVDITLSDLWEPWIASKGNISDKTKRDYLS FT YWNVHIRPQWGQTPCAHIQRSVINAWIPTLSTMKGVPASQPPRPLSESAMRKVGLIIHG FT ILDLAVELGVIHQNPIRTGDLPKQKKSERRYLKITEVDELIRQAPTEQAKLLLRVLIMT FT GLRPGEAKGLKVKDLDPVRGRLMIRRDVDDLGHEDSTKTRNHRDVPIGGEILLLLDRYA FT QGKDPDSWLIPDERGKVWTTSRWRVVWKNLCIWTGIGDLDTYELRHTAASIAIAAGADV FT KTVQLMLGHSSAAMTLDIYAHLWEEGLDAIPGAMEAHMESERKRAEEASTVHEASEAER FT RRAQFKVIG" FT misc_feature complement(155720..156307) FT /note="HMMPfam hit to PF00589, Phage integrase family" FT CDS complement(156926..157948) FT /transl_table=11 FT /locus_tag="DIP0183" FT /product="Putative transcriptional regulator" FT /note="Similar to Streptococcus pneumoniae transcriptional FT regulator SP1809 TR:AAK75882 (EMBL:AE007473) (383 aa) fasta FT scores: E(): 8.2e-14, 29.35% id in 310 aa" FT /protein_id="CAE48687.1" FT /translation="MPTLSSNLKHLRLLLGRSQGEFAEQLGIAQSTLSSVERENRPPST FT KLINTARFQTGVSAEYFEASIHFYAAPDLLFRSAREGRANADKIAAAFSIAEHYLRERY FT PDVTSDLPTIPIADLEGELSLRMLEEFASQTRDHFGIDQDSMIPNLTTVLNNHGILVTS FT LPDYVVEGTNFDGVSTPTDSTLRIIALNQQRSGDRYRFSLAHELAHLILHANTLRSDKS FT QMEKEANIFAASFLMPRALLTPVITPELTLKDYAELKAQWGYSIQAIVRRAHELELIDY FT KRYRSLRMQIAGRGWNINEPVDVLLENVYIDPIDLLSNNIKKHQSTNEGLATVTSLHKQ FT " FT misc_feature complement(157316..157345) FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT misc_feature complement(157763..157927) FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT misc_feature complement(157763..157930) FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature complement(157835..157900) FT /note="Predicted helix-turn-helix motif with score 2114 FT (+6.39 SD) at aa 17-38, sequence RSQGEFAEQLGIAQSTLSSVER" FT CDS complement(157960..158523) FT /transl_table=11 FT /locus_tag="DIP0184" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48688.1" FT /translation="MAHTTGENLFTMKRVLRNLEADHDALREALADGRRMRDLLPYGDY FT INRYRNLTRDPMVVAIHKQFHESGLGGLTIDESMFPLSLRFEDDDVTLVFRRPEGFRHG FT TNEESSQRPLIERRSRIVLFWKYAEPGTDALKRISLQMFDNEGPLEEATMLSEKIPLLT FT KPESLTTAMFIPTHADEPRFVFGS" FT CDS complement(158618..159025) FT /transl_table=11 FT /locus_tag="DIP0185" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48689.1" FT /translation="MSPVEAALETLAHTMGITVIETSKLGSTLNACFHPPTQTIFIKIG FT LDPVTRRCAIAHELGHAHYGHNCSTPGAERQADEWAAQQLLDVGDVEAVGLECEGSAAA FT MAAELGVTPHLLVLWMGMYERGRIQPEKRAC" FT CDS complement(159035..159196) FT /transl_table=11 FT /locus_tag="DIP0186" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48690.1" FT /translation="MDTRRKAKRGNNSPTAPPHVTEPDYDAILDGINAGTEPIAAQKAT FT DPLEENYT" FT CDS 159639..159881 FT /transl_table=11 FT /locus_tag="DIP0187" FT /product="Putative transcriptional regulator" FT /note="Similar to Pyrococcus abyssi repressor protein, FT putative PAB7155 TR:Q9V101 (EMBL:AJ248284) (73 aa) fasta FT scores: E(): 0.002, 36.06% id in 61 aa" FT /protein_id="CAE48691.1" FT /translation="MNMANVKIKIRDGLIDRLRNMSGITSDEAFARTIGTSRSTLVDVK FT TGEREPSLAFAIGIAQAFGLGLSEIVTWETETTAA" FT misc_feature 159678..159848 FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature 159681..159848 FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT CDS complement(160120..160446) FT /transl_table=11 FT /locus_tag="DIP0188" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48692.1" FT /translation="MSKVVLVYGGQRYTLATSDVASVHFRITERLNHSAHYRDRLDRRP FT FGQEQGSLQDFPGGPLLEQFDPFEVFELADGGEVWVACYDGVDLALETEQRTKDFFEPY FT RDQR" FT CDS 160470..160961 FT /transl_table=11 FT /locus_tag="DIP0189" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48693.1" FT /translation="MQSLFRLRVKGTPLVELRVVPFEKDRFTIVHADVKDPVTVHAVTI FT EEIHNLMTLLFRQTLRNLGVSRIGKDELDVVIRLDPQARETGRPKVKRYTALVEGIHSV FT GDPGERPVRHLVFVTVDIQRESFIAHTKRVIRRIKHDSRFHRKMKHLSERRKRDGIKTI FT " FT CDS 160942..161760 FT /transl_table=11 FT /locus_tag="DIP0190" FT /product="Putative anti-repressor protein" FT /note="Similar to Staphylococcus aureus prophage phiPV83 FT antirepressor TR:Q9MBT0 (EMBL:AB044554) (265 aa) fasta FT scores: E(): 1.5e-32, 42.8% id in 257 aa" FT /protein_id="CAE48694.1" FT /translation="MELKPFNFRGHNVRVLVAENGEPLWVGRDVCAVLEIKNSRDALSR FT IDPEGVGIADTLTPGGIQKLKVVNESGLYELLFQSRVPQAKEFRRWVTGEVLPEIRRHG FT MYATTATVEQMLADPTTAIKLLEQIKQERDQRRALEVQAAIDKPKVMFADAVAEANTDI FT LVRDLAKILRGNGIEVGGNRLFAWLRKHKYLMDGPSHIKHTPTQKAMELGLFKIKETVV FT TRSDGRSSITVTPKVTGKGQRYFVERFLDGRFDINDIKTNKNRPVAAGRK" FT misc_feature 160942..161235 FT /note="HMMPfam hit to PF02498, BRO family, N-terminus" FT CDS 161977..162219 FT /transl_table=11 FT /locus_tag="DIP0191" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48695.1" FT /translation="MTMRTYKNPYPDSEDAVEIRFDHCREDIAKAAQEYWREMTEAELD FT DLQEEIMRALAVSEWQNIWLTSAAFITVLAYHFHD" FT CDS 162231..162455 FT /transl_table=11 FT /locus_tag="DIP0192" FT /product="Putative exported protein" FT /note="No significant database matches. Possible exported FT protein" FT /protein_id="CAE48696.1" FT /translation="MILLVLINIVFSMLLLFNLTDANRKIEDATKRLDMLNEDVDVQSV FT KILDLYGIAQIPPMPDEEAASRIFTEVRR" FT misc_feature 162231..162302 FT /note="Signal peptide predicted for DIP0192 by SignalP 2.0 FT HMM (Signal peptide probability 0.644) with cleavage site FT probability 0.635 between residues 24 and 25" FT CDS 162452..162598 FT /transl_table=11 FT /locus_tag="DIP0193" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48697.1" FT /translation="MNRTALEELHQALISEAEAMRTGEYFLGAGIVDAYAHQLREAIDS FT HDE" FT CDS 162606..162875 FT /transl_table=11 FT /locus_tag="DIP0194" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48698.1" FT /translation="MCKHCGAAVLFVKDDRWHVFDAKPSEEGEWRIRSRWAANVAAEKT FT TVTRLTESKLRRARLMGEPLFRPHFQTCPANPRAKILQEKRRHG" FT CDS 162868..163017 FT /transl_table=11 FT /locus_tag="DIP0195" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48699.1" FT /translation="MDDASIADEWWENLPERRKIQIHHWIVSPRQITIQELPGQIALIE FT GTEQ" FT CDS 163014..163457 FT /transl_table=11 FT /locus_tag="DIP0196" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48700.1" FT /translation="MTKTQLVCDKNQLNWGLKAAKAIAGKSPYDVVQMRVSPDRDYLYI FT CAVNAEATLVAKVELLVANISSEEDEIITIDKAKIPALILATAETGKKSEDSRPMAGIC FT IRGKEVDFTDENGAGRGVDLTTIHRNDSAEIGDPVRTIIRVKQ" FT misc_feature 163071..163094 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 163482..163715 FT /transl_table=11 FT /locus_tag="DIP0197" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48701.1" FT /translation="MTPSPAQITELARATRYLGGNPTLSMRSYMHEGTESHRLVAEATF FT WTLSVLNVPEALLETEKDKANIVDAAPIGGIS" FT CDS 163814..164122 FT /transl_table=11 FT /locus_tag="DIP0197A" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48702.1" FT /translation="MLERHKIARKKCMTCTLLAECEKMLSDFEKEELRVDGVVAGRYCD FT VSHRNGSSIDVLRHCKHCNVRLIPQGGPRGKEPSGARKHRGEGLCAVCYPLFSRKQR" FT CDS 164151..165359 FT /transl_table=11 FT /locus_tag="DIP0198" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48703.1" FT /translation="MAWSRVGDNIATHPLMSRLLTSCEFDHSLKNEAFGALVQLTTVSA FT AHLTDYIIEYGLMAQIAPGREKQLIDVLVDAGMLFRDEVDGRKVLRIVDDNELLHNRSR FT DEVEIDRRRAADKRNPALIPAVRYRDGDQCRWCGRTVDWRDRKGGRAATIDSLNEHRES FT TVDTLVVACKSCNSKRGAGEELQLLPTPTREKVHYTDHTIDWINRSEWAQHEGIHLEPR FT QTHLDIGQQITTPAAPSEQQQVGQAAAPLEAAARAHRAAPDVEAPFVSDPLDEAPDWVK FT QSLVNDHGQAAAPLMAAAPREHDHAPAAPSEQQQVGQAAAPLEAAARAHRAAPDVEAPP FT QHHVDNETVKPSTDLEQITDRWGDGSRSLGTGRDGNGQVGTARRRRRRRRGGRGTGRNK FT AHG" FT misc_feature 164889..165149 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 165297..165341 FT /note="ProfileScan hit to PS50323, Arginine-rich region." FT CDS 165352..165966 FT /transl_table=11 FT /locus_tag="DIP0199" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48704.1" FT /translation="MDSWKLHSLGKALYELEKLGPLLDDLLLPSQCGYSEGRGGSGQGS FT RPPLRIPILDVKWETERLLSYWSARLAVRLQLVPPRARSVAISAAWLQRHLIEIEPDPE FT FDQAAEQIIEQARIIDAMFTEDATPDEDMEGTCREIASACRRLGYEISKTTVHRWAREE FT TISSKTMEDGRVIVSLQEVIGKLTACDNEEVVDSGTPNIVS" FT CDS 166018..166335 FT /transl_table=11 FT /locus_tag="DIP0200" FT /product="Putative phage protein" FT /note="No significant database matches" FT /protein_id="CAE48705.1" FT /translation="MHQRCNTRGGQDMGFDSRAAKKLKAMFKQQCRDAGAVCWLCGQPI FT NYDAPPNSRDSFEPDHFYPQATHPELAEDPENLRPSHCSCNRSRKDGVPAPSLGSLSEQ FT W" FT misc_feature 166093..166278 FT /note="HMMSmart hit to SM00507, HNH nucleases" FT CDS join(166479..166829,166831..168423) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0201" FT /product="Putative phage terminase (pseudogene)" FT /note="Pseudogene. Similar to Bacteriophage BFK20 FT hypothetical 75.6 kDa protein TR:Q9MBK4 (EMBL:AJ278322) FT (679 aa) fasta scores: E(): 6e-79, 40.76% id in 677 aa. FT Presents a frameshift at residue 117" FT /db_xref="PSEUDO:CAE48706.1" FT misc_feature 168319..168405 FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT CDS 168436..169686 FT /transl_table=11 FT /locus_tag="DIP0203" FT /product="Putative phage protein" FT /note="C-terminal region similar to Bacteriophage BFK20 FT putative portal protein TR:Q9MBK2 (EMBL:AJ278322) (215 aa) FT fasta scores: E(): 1e-40, 56.45% id in 209 aa, and FT N-terminal region to Bacteriophage BFK20 hypothetical 24.1 FT kDa protein TR:Q9MBK3 (EMBL:AJ278322) (213 aa) fasta FT scores: E(): 3.8e-29, 41.79% id in 201 aa. Note: It seems FT these two bacterophage proteins have been fused into FT DIP0203" FT /protein_id="CAE48707.1" FT /translation="MGFLQRIGLLPQVTTTPTQHELLAPLLDTYIGVVTEMPTEELFAE FT QPHLRTVTTFIARAISSTSLHVYRRDSDGGRHRVRDSDLAKLMRRSSKTELMQDMLNGS FT ILDLCLYDEFIWVAMEDSDSGEWELHRIPPTWIKQRKHSDPWTLEWMGIIDAKTGQQIK FT IPAERIIHVHGYNPTSTSRGLTPVVALRETLKEQLESAAYRGQLWRNGPRLGGVITRPK FT DAKWDSTSRKRFKAAWQSQYSGRGSGAGGTPILEDGMQFVPAHLKAQDEQVVEMTKLSL FT QTVASIYHVNPVMVGLLDNANYSNVREFRRSLYGDSLGPIIKQVEGVINEFLRPMIDDD FT DAVYVEFNLDEKLRASFEEKAAVTSTAVGGPWMTRNEARAMNNLPAIDGGEDLITPLNV FT TTENSESNNDVGLEEES" FT CDS 169683..170726 FT /transl_table=11 FT /locus_tag="DIP0204" FT /product="Putative phage prohead protease" FT /note="C-terminal region similar to Bacteriophage BFK20 FT putative prohead protease TR:Q9MBK0 (EMBL:AJ278322) (204 FT aa) fasta scores: E(): 1.1e-35, 66.46% id in 164 aa, and FT N-terminal region to Bacteriophage BFK20 hypothetical 18.4 FT kDa protein TR:Q9MBK1 (EMBL:AJ278322) (176 aa) fasta FT scores: E(): 6.2e-14, 51.06% id in 94 aa. Note: It seems FT these two bacterophage proteins have been fused into FT DIP0204" FT /protein_id="CAE48708.1" FT /translation="MTIHVVIGPPCSGKSSFVEANAPAGIGRFDFDNIAGTVAGQDVKN FT ASPNPVANAVLAMRRGLMGWLLDVELDPPEFWLINAQPSPALIAALSARGATFHLCDPG FT MEECLARAARDGRPQSVEDRIRQWYDNPPELPTKGGHEVKTKSYDVSIDETQTEGTITA FT YASVFGNVDSYGDVVIPGAFEETLGEWQKSGNTIPLLYGHDFKDPFSNIGGVTSAVEDA FT HGLKITAQLDLDNPKARQVYNLLKAKRLSQMSFAFDVVEGSWGEREQQEVYELKKVKLY FT EVSVVPIGANQETSIIDVKAVVAEELANMLDSRQLTKSISNKPPKQGAFALSALDAHLS FT ILEKENR" FT misc_feature 169704..169727 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 170723..171973 FT /transl_table=11 FT /locus_tag="DIP0205" FT /product="Putative phage capsid protein" FT /note="Similar to Bacteriophage BFK20 putative major capsid FT protein TR:Q9MBJ9 (EMBL:AJ278322) (428 aa) fasta scores: FT E(): 5e-66, 47.14% id in 420 aa" FT /protein_id="CAE48709.1" FT /translation="MNLKDLLAHRENLMDSAKRARSAITDDMDPADAAQAVENVKSIIS FT EIESTDEAIAARRGVSDVTQKLKGLTITERGTENDSAASRSLGEHFVKAAGDRLKNQAA FT GAHIEYSVPEYQVKEDAHSSPKDLVEGWGTFYQRGIINQRRERLVAADLMGAATVTAST FT VKYIVEKANRIASGAPATVAEGTKKPYVKYADFDVVTESLSKVAALAKFTDEMIEDYDF FT VASWINNNLVYDLSVVEEKQLINGDGRGSNIKGLLNREGIQTHKSAKQADWFNDLFKAK FT NKVSQATNLEADGIMINPVNYEALRLTKDGNGQYIAGGPFQGQYGNGNILIDPPLWGIK FT TVVSNAVPAGTAIVGAFRQGATVLRKGGVRVDSANTNADDFENNLVTLRAEERLGLMVP FT LPAAFVKVTLEETTEEL" FT CDS 171973..172173 FT /transl_table=11 FT /locus_tag="DIP0206" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48710.1" FT /translation="MRREYEATTPYGQKLTLEMSEDYKNAHWPDAVLLEDTWPAASSFE FT AAETKRKTPTRNRAQKPEADK" FT CDS 172195..172677 FT /transl_table=11 FT /locus_tag="DIP0207" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 19.9 kDa FT protein TR:Q9MBJ8 (EMBL:AJ278322) (180 aa) fasta scores: FT E(): 3.6e-16, 38.46% id in 156 aa" FT /protein_id="CAE48711.1" FT /translation="MNAITPTPGIDKEAFDRAANAVRRLCGWHIFPIIEETITLDSPGD FT SLLVLPTKHLVEIINVTIDGTTYPLSDFRSSPDGLLVKRHGRFPRGIAMVTVTMKHGYE FT KPTEILGVINDMARRANESNLTQLNVGGISVGATNSATPQSSEWRIVDELRLGPLP" FT misc_feature 172195..172350 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT CDS 172674..173036 FT /transl_table=11 FT /locus_tag="DIP0208" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48712.1" FT /translation="MSIIFNQRIEIIRAGEKRSVYSSDVMEDWDNPVVLPVEVPVSIQP FT VSSTESDATANRSYVTSRFRLFSPPGIDIPQLKAKDRVRIGLLVLDVVGDPARWPHPLK FT PATVHHVEADLEVHRG" FT CDS 173002..173295 FT /transl_table=11 FT /locus_tag="DIP0208A" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 10.2 kDa FT protein TR:Q9MBJ7 (EMBL:AJ278322) (94 aa) fasta scores: FT E(): 2.5e-07, 44.57% id in 83 aa" FT /protein_id="CAE48713.1" FT /translation="MWKQIWRCIVGKYDKQFQQLNRNPKIAQALKNRAEKTRAAAQRIS FT DAEGGTAHYRVVSGVRPGGRAYAYVVSDNRDEEFGTEKTKRIGALRRAARGG" FT CDS 173285..173662 FT /transl_table=11 FT /locus_tag="DIP0209" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 13.7 kDa FT protein TR:Q9MBJ6 (EMBL:AJ278322) (126 aa) fasta scores: FT E(): 1.5e-11, 37.06% id in 116 aa" FT /protein_id="CAE48714.1" FT /translation="MVDEKAVIISKLSKLGFPVYSELPHDFEEKHLPVLWVQHVGPAAR FT RQAINSRGIDYVDLDIDLFVSLDMWHTGAAMELAQTIRTHMHRFREGMLKVLDTGRPEP FT RPDFNSTIRRCGLTITVAVPA" FT CDS 173691..174638 FT /transl_table=11 FT /locus_tag="DIP0210" FT /product="Putative phage protein" FT /note="N-terminal region similar to Bacteriophage BFK20 FT hypothetical 13.9 kDa protein TR:Q9MBJ5 (EMBL:AJ278322) FT (125 aa) fasta scores: E(): 1.3e-21, 50% id in 116 aa, and FT C-terminal region to Bacteriophage BFK20 hypothetical 14.9 FT kDa protein TR:Q9MBJ4 (EMBL:AJ278322) (145 aa) fasta FT scores: E(): 3e-10, 37.85% id in 140 aa. Note: It seems FT these two bacterophage proteins have been fused into FT DIP0210" FT /protein_id="CAE48715.1" FT /translation="MTDFDIDTSAANYADELALLGVTGAMSYAPKGTQMPETIAPLNPP FT FVDFGWLSDGGITESQNEERNDWTPFQSTNPIRGQVTKQDFQFKTVVWSISGLANAMYY FT GVPESDMRFDQETGVTTFEQGKELPPDFKFGLVVDIVDGGKARRHCMPNVSVVERGDIV FT YSKDDLVGYEMTFRASYDPVAGYAVRRMFKEGWKPGHAGTTLADENKDASLGDWSNTLD FT ESEVRKQSKTVTLPKGATGGTFTVSINGKASAAINHDATGTAMKLVLNKVDGGESAKVT FT GRAGGPYTITGVEGEITADGTNLTGSDTQDISIN" FT CDS 174736..175113 FT /transl_table=11 FT /locus_tag="DIP0211" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage BFK20 hypothetical 15.7 kDa FT protein TR:Q9MBJ3 (EMBL:AJ278322) (138 aa) fasta scores: FT E(): 3.2e-08, 37.09% id in 124 aa" FT /protein_id="CAE48716.1" FT /translation="MTIDLNAMLAKRAEVLGEGNKFDVKLGNKTFYFVAPELASSEWND FT RHQAFLEDIRDGLMTSATAREEFLGLALEDQAEEFAEAADNIGVDPFIIAQMAFQEHAE FT YVGKTQSQKSLNRTQRRAKQR" FT CDS 175275..175484 FT /transl_table=11 FT /locus_tag="DIP0211A" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48717.1" FT /translation="MMWEISNLIRITNFLLERSQAKNPNHVKAPKLKLYPWSPDQDIKH FT YGKVDEEDQVDAVNFLLGLSPPPQ" FT CDS 175497..181139 FT /transl_table=11 FT /locus_tag="DIP0212" FT /product="immunity-specific protein Beta241" FT /note="C-terminal region identical to Corynephage beta FT immunity-specific protein Beta241 TR:Q37919 (EMBL:L04258) FT (241 aa) fasta scores: E(): 3.1e-64, 100% id in 241 aa, and FT whole length similar to Staphylococcus aureus subspaureus FT Mu50 phi pvl ORF15 and 16 homologue SAV1955 TR:BAB58117 FT (EMBL:AP003364) (1509 aa) fasta scores: E(): 2.9e-19, FT 23.76% id in 1073 aa" FT /protein_id="CAE48718.1" FT /translation="MDSDATYVPILASFDGFFKSIDKNAEKAGQQAATTFAESMERNLQ FT RAERAAEKAGTVFERAHNRAADAAAKTQIAELKLLEVKEKQGAKASEVAAAEAKVEKAR FT RDQEAADKAVAKAAKSLASAQDDVAKATQQAGDAMEVNAEKAGLFSKMTGGLGDKLGAL FT PALAAGAVAGFAGFVAIKETLLDVGSAFDSAYDTIRIGTGASGEAFAGLQQSMRNVAAN FT NIGIGDDMEAVGTALADINTRLGLTGAPLEKMTAQMLQLQHMGVDADINAVSQALNGFG FT IEADAMPAALDSLFQVSQATGLTITELSNSAVKAGPQLRQFGFSMADSAALVGQLDKAG FT VNADGVLSKMSKALTTFAAEGKDAPKALNETITSIEQLVKAGNSQGAINLAEGIFGAKG FT AEQFVDAVQTGTLSVEDFMSATGATNDTISGLAAETASFKEHWHQFKMQAMLAIEPVAT FT AVFNMLTPAILNLKDGFTSAIEFVENTLVPGFKKIPDVLAVTAQWLDDNRNKLIALAVA FT VSPIVVPFLVGLAAKWTAAGVAATVSAAKQAQAWVLTKIEAAQASAANIAALWTTGAGW FT IKAGAQAILGAGQIAGAWLLTKAQSGVSIVASIAAVGIGWVTTGIQALAGAAQVAAAWV FT IGLGPIAWVTAAIAAVGAGLVWFFTQTETGKQAWQSFTSALQAGWDLFSSALRTGWEML FT KTAVFDAWTVRVETLKSVWEATTGAIGAGWEWLKGALYSGWMWISGNVIEGFKAGLSGL FT RDFFSSVVNGIKSTWATLRSALAKPVNFMINTVYNGGILKAWNVIAGLLPGLKQGNPLA FT GIPEHATGGRIAGPGTGTSDDVLMWGSNGEHMLTAKEVQRAGGHNAIYFMRDLIASRTP FT FTWDGGRFIAEHRKSVNDYGSEVKRRGIGNVDDNGLFSMLPKFKDGGAIRPMWELQLEN FT GHKAAKSRNGNPYTWGYEDCSGYMSAIADAILHGGRGRRAWATGSFPGGQPWAPGLGKG FT FSVGVHDNPGGPGGGHTAGTLTGVGPYSTVNVESGGSHGTVAYGGPAIGADHAQFNGVR FT PGRFHLAIGADGAFETAGSGGVSPQAQRSMIAKAFGGVISTVMDPIAAKLPSPPPAWQT FT IPRGAYDSGKDALVKGVDNAVNSIEDSLATVYRGISKIPNLLKEKGPRGIEKKAKIYDR FT GGILGHGEIAINHGAPERILPPALTASFDKFTTVVPQVADRFGIIADKLLGTKIRETPT FT APGSLNAQVDMEKLNDQLSGLHSMADKVVPVLETVNAMGIEGLKGLTHITGAWKEYVSV FT ENSVAKAAEDSKAANEALATARKELADLEREIAKKGPNAKGQAEDSKKLAEARKKVSDA FT ESKAVDSSSALEKALGDVAVGQIKLALSVVSAIAEIGKAIAGAFTAVYEGQSRGWSLVS FT QMAEEVEKGRQKLSEMRIENANLTIQQIKAINDLRIAQWDTHRAALNGALGIAQAQAEL FT DKRRREGIMLGASGIDAMARAMDRYRKTGIFAIEEVTWYTEEQKRKIKAAEWKVHEARI FT QSAIDQLDAQGKVELAGLAAAEATLKQHTAVRLLELSAQKLSAQAASFYGVTAQGATAL FT ERMNQGKALQGKGAGSIFGGILKGLGGAAGGAAAGFALGGPVGALLGGIAGLLFGGAGQ FT VMNGIAEIKQGRMQESTYKKYAEEELKKLPPEVQKEIHSAGVMGGIASFFGGNGAMIAS FT TPFEAMKIKNQFATWDYEKKLQSMEHDSSIQKQLLATQRAQIEQRLAAQKAALEAERDA FT AGYHAAAGEADNEGVRQAYDALAQDSARRARDLAETAQRGKSQLDEIVGRLKDLADRSA FT ANIINQGINQTVVVKLEKTGRLHTDQDIAKALEETLNAVKGLEARVEMVEAARAPSALE FT AAHSQL" FT misc_feature 175569..176033 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature order(177027..177086,177216..177284,177312..177380, FT 177399..177467) FT /note="4 probable transmembrane helices predicted for FT DIP0212 by TMHMM2.0" FT misc_feature 177084..177455 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 177252..177287 FT /note="ScanRegExp hit to PS00213, Lipocalin signature." FT misc_feature 178386..178703 FT /note="ProfileScan hit to PS50315, Glycine-rich region." FT misc_feature 180249..180422 FT /note="ProfileScan hit to PS50315, Glycine-rich region." FT CDS 181149..181901 FT /transl_table=11 FT /gene="beta201" FT /locus_tag="DIP0213" FT /product="immunity-specific protein Beta201" FT /note="Similar to the previously sequenced Corynephage beta FT immunity-specific protein Beta201 TR:Q37920 (EMBL:L04258) FT (201 aa) fasta scores: E(): 3.9e-64, 85.64% id in 202 aa. FT Note: there is a frameshift in the already sequenced data FT in from residue 167" FT /protein_id="CAE48719.1" FT /translation="MQVMFYSPSGQKLFGENGSPAFLLKGGITDLKGAIEARTTVIPEV FT PGQVFDGVTIKPFTFGVTMVVYPTKEMPMEKAMRKTRQIFSAFDYSTCRIDGTGIPVGL FT KVRLDSIISAPSQDTAKEIAEEITITLAADEGIFWADRKEASGKIDIVNYGDCDLWPEY FT RWQKTTTITLPSGAKINLPETPTPRVLRTTRHQVSITDLDGKPDRELLKKLGTVWPEGV FT PRKETKTYEITQNGYIMWRIGYLDPWGL" FT CDS 181902..182762 FT /transl_table=11 FT /gene="beta286" FT /locus_tag="DIP0214" FT /product="immunity-specific protein Beta286" FT /note="Almost identical to previously sequenced Corynephage FT beta immunity-specific protein Beta286 TR:Q37921 FT (EMBL:L04258) (286 aa) fasta scores: E(): 1.1e-115, 99.65% FT id in 286 aa" FT /protein_id="CAE48720.1" FT /translation="MDVSQWEQFAKHRSAVIRDYGMWIGLMDNNMEPIVDMPAPVSIDA FT PITRMTPSSCKAVFKTRVDGHIHPMVDYLIAENLAKVDEQGQLIAAAQDAVFLAIEVAQ FT GIRNVYKGVFTVALGDQESPTLLEFNGVCEIQWTLGALPCPSAPYSWTGKWVDLNQDWA FT GKWSKTRTMADIKVAEVADGFTLSGAADTTIGKLISQSLQAINTMLKSKGRSLPIAVKP FT VTSNPTSPQLVIRPTDRFIWDEISDLALAAGVTVKCKTWWPSDPPVPGLDLKEPIVVIE FT ITQEE" FT CDS 182762..183877 FT /transl_table=11 FT /gene="beta371" FT /locus_tag="DIP0215" FT /product="immunity-specific protein Beta371" FT /note="Almost identical to previously sequenced Corynephage FT beta immunity-specific protein Beta371 beta371 TR:Q37922 FT (EMBL:L04258) (371 aa) fasta scores: E(): 9.9e-126, 89.75% FT id in 371 aa" FT /protein_id="CAE48721.1" FT /translation="MDPVIKLVAHAQEMSMTIPRRQACMVYGKLNVTLKKGDVQEERDK FT RVTDGYVHIPEDMPQGRFDFGFTREDADVNIGTGQSTYELALDTAARRITGQVLFEQDI FT IAPGFGDWRPLIDFSCGDLVGVRIWGKELVLPVTSITRETTGWRAHVGGQLINDRRKII FT SENRKILADIESERRERMNEIGAISSVASAASVAAKDADAKAETADGKAEDALEKWRRQ FT KDQLDKVQSDLIEKNTQWNRIQDRGLNELAAQQEAMKRYVDLSRPSSVTVSTWDPVWAG FT PVQVSYPSRNQVELYLKHSPYIIGASVLGIARVNALSGYSFSFTADMTAGQTFTPQVGG FT FESFNQVSVTVHPIVNFAAILSEERRKRGLQ" FT CDS 183877..185304 FT /transl_table=11 FT /locus_tag="DIP0216" FT /product="Putative phage tail fiber protein" FT /note="Low similarity to N-terminal region of Bacteriophage FT lambda side tail fiber protein Stf SW:STF_LAMBD (P03764) FT (774 aa) fasta scores: E(): 0.0021, 24.28% id in 383 aa" FT /protein_id="CAE48722.1" FT /translation="MPKLKGSLKNITDKPSTIREVLLRATHTRTNGKTITTSEPVRVKV FT SESGDFTETLAPGAAVLVLVGADFMARESIPLLVAEGMTTIAEAMEAARDFTPDVHDRL FT AELAAETQKNLEEARGVKAEADSATARMREAAQALKDSVDGSIAEATVGIKKSGSELLA FT SMQALQSKAASSESEAKESAQGAEASRSAALASASSASSSAGEAAESLAGLRAKIEEWK FT PHGEQLAQWQPQFEWLKENAASGFTKIAELMQDAAAGVRGELSGLVEQAKTAQTTAGQH FT SLKAQAAAKDAESVANRVVDAAIAKLKGNAPAMLDTLEELAERVISGGTLETEILQKLS FT KMADSDTVKKIVARLDGLTIAGVQGLSAALADKAAARHKHGTSDINGLDTELAGFKGAL FT AEKAPRQHGHTLQEISGLSGAILNVRNELSQKASQQYVNSVETEAKRQYGRIKDISVVN FT SLPASPDAGTIYLVKER" FT misc_feature 184135..184815 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT CDS 185304..185978 FT /transl_table=11 FT /locus_tag="DIP0217" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48723.1" FT /translation="MIFYGSSKIKEVFYGDTRIKEVYAGADLVWKRITDTVKFANGGAV FT DFRKAAPEGFKGYLYSDTIRADKDGFYDFHTTGPSGRLCLDDGHGEFAIIPLTRGNDGV FT RVFVRHTDMITFRFNEKNIPITITAKPSTVNDPRRTVVLNYSSTDQIEDSGWGTAIPSA FT RGRGVNLKPGRYWLTSSKSVYINDNWVRAPGGWVDFHSSARSNIRLYYRDVRAYLVPGQ FT KL" FT CDS 186059..187498 FT /transl_table=11 FT /locus_tag="DIP0218" FT /product="Putative phage protein" FT /note="C-terminal region similar to C-terminal region of FT Mycobacteriophage TM4 GP29 TR:Q9ZX49 (EMBL:AF068845) (547 FT aa) fasta scores: E(): 3.7e-35, 49.14% id in 234 aa" FT /protein_id="CAE48724.1" FT /translation="MNTVIDFSAGVPPAVEVKAAGHIGVMRYISPPRLSWMTAKPATRP FT QIDRCRSAGVDVGFVWQYGGADNPDTMRGRTGGHADATSAQAKLIELGCPHHPVFFAVD FT FDISLDQWNATAVHYFKAACEVLGRDRVGIYGHSRVISWAVEDQVIADLGGGKHLAWQT FT PAWSMGERATEAVLYQGAANVKGPAGINIDVNEVLHHEWGQHPVGETRLEKSQEMELAM FT KPNPNHRGDPLFLPDVLKAFGVKVQEWDGWRDRGHGDFTVIQGVFAHHTGTDKDIPGYI FT ADHPELGLCSQIHLNRDGTAVIVGAGIAYHAGRGSYPGWPTDNANQVAIGIEAASSGTS FT PWPPAQLDAYYRTCAAILWYLGKPATPQTLLGHKEYSGAAQGKWDPGGIDMNDFRRNVQ FT HYIDNPPFLAADAAHITKEEDPMIQSLINPAKKFAQSTLISIVDATCWQILVLAKAIAK FT KQGLDPDQILADAITADREGK" FT CDS 187501..187824 FT /transl_table=11 FT /locus_tag="DIP0219" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48725.1" FT /translation="MANTDIQIAVTRALESQSWWLRRKDSLTSGAGLVLHFANLIVALL FT GDANPWVNVVVALVIGVAQLIIHAGTKGAITPSMVARIDNAAPTPPVFDLDQARDQLAA FT PSE" FT misc_feature order(187579..187638,187651..187710) FT /note="2 probable transmembrane helices predicted for FT DIP0219 by TMHMM2.0" FT CDS 187830..188294 FT /transl_table=11 FT /locus_tag="DIP0220" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48726.1" FT /translation="MPIEHLPPRVQPTARRVRAFLMTDSTALLLLAVVQAAMGLYYLPG FT VLGDPLRWQRPVESIMPIIAWAWVHLAVGGLCAVAAVTDRWHVDIVALALATGLNLSWA FT FSLLAASVEHNQSVLWLVGVLILAMTVSLMWAVWRGKRGDIPFAKEGGAA" FT misc_feature order(187905..187973,188016..188078,188097..188165, FT 188175..188243) FT /note="4 probable transmembrane helices predicted for FT DIP0220 by TMHMM2.0" FT CDS 188291..188629 FT /transl_table=11 FT /locus_tag="DIP0221" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE48727.1" FT /translation="MSVVAAFLSGVGALVTALGGVLIGVVKARSDTHTAKGSRMDVLEA FT RIDKMQADLDDERARRRGVEVDNHRLRMALVTAVKHLEQLIRWADGGAKPPRPDDIDLD FT EIKSLLKA" FT misc_feature 188291..188374 FT /note="Signal peptide predicted for DIP0221 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.930 between residues 28 and 29" FT misc_feature 188928..188946 FT /note="tox promoter, DtxR-regulated" FT CDS 188979..190661 FT /transl_table=11 FT /gene="tox" FT /locus_tag="DIP0222" FT /product="Diphtheria toxin precursor" FT /EC_number="2.4.2.36" FT /note="Identical to previously sequenced Corynephage beta FT diphtheria toxin precursor SW:DTX_CORBE (P00588) (567 aa) FT fasta scores: E(): 6.2e-216, 100% id in 560 aa, and to FT Corynephage omega diphtheria toxin precursor SW:DTX_COROM FT (P00587) (560 aa) fasta scores: E(): 1.1e-215, 99.82% id in FT 560 aa. Note: The start codon for DIP0222 is 7 residues FT downstream of the one in Corynephage beta" FT /protein_id="CAE48728.1" FT /translation="MSRKLFASILIGALLGIGAPPSAHAGADDVVDSSKSFVMENFSSY FT HGTKPGYVDSIQKGIQKPKSGTQGNYDDDWKGFYSTDNKYDAAGYSVDNENPLSGKAGG FT VVKVTYPGLTKVLALKVDNAETIKKELGLSLTEPLMEQVGTEEFIKRFGDGASRVVLSL FT PFAEGSSSVEYINNWEQAKALSVELEINFETRGKRGQDAMYEYMAQACAGNRVRRSVGS FT SLSCINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALE FT HPELSELKTVTGTNPVFAGANYAAWAVNVAQVIDSETADNLEKTTAALSILPGIGSVMG FT IADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELVDIGFAAYNFVESIINLFQVVHNS FT YNRPAYSPGHKTQPFLHDGYAVSWNTVEDSIIRTGFQGESGHDIKITAENTPLPIAGVL FT LPTIPGKLDVNKSKTHISVNGRKIRMRCRAIDGDVTFCRPKSPVYVGNGVHANLHVAFH FT RSSSEKIHSNEISSDSIGVLGYQKTVDHTKVNSKLSLFFEIKS" FT misc_feature 188979..189053 FT /note="Signal peptide predicted for DIP0222 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.839 between residues 25 and 26" FT misc_feature 188979..190658 FT /note="BlastProDom hit to PD025441, PD025441" FT misc_feature 189054..189614 FT /note="HMMPfam hit to PF02763, Diphtheria toxin, C domain" FT misc_feature 189087..189143 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189162..189230 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189276..189344 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189390..189452 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189453..189521 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189549..189617 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189651..190190 FT /note="HMMPfam hit to PF02764, Diphtheria toxin, T domain" FT misc_feature 189867..189926 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 189954..190022 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 190035..190106 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 190149..190211 FT /note="FPrintScan hit to PR00769, Diphtheria toxin FT signature" FT misc_feature 190194..190655 FT /note="HMMPfam hit to PF01324, Diphtheria toxin, R domain" FT tRNA 190709..190788 FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:190749..190751,aa:Arg) FT /note="tRNA Arg anticodon ACG, Cove score 23.44" FT misc_feature 190792..208253 FT /note="Anomalous G+C content (56.92%) and G/C deviation. FT Putative pathogenicity island. Not present in C.glutamicum" FT CDS 190816..190992 FT /transl_table=11 FT /locus_tag="DIP0223" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48729.1" FT /translation="MGWGFFACLVRAGAPFPARPFSRLLELKNTKTAGSENLLKVPPLG FT FRVLEFEFADFGG" FT CDS 191070..191210 FT /transl_table=11 FT /locus_tag="DIP0224" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48730.1" FT /translation="MPKLFGRFGISAGWRYKKWFNLARTTHLPSKVSHPEEFLAQLVWM FT R" FT CDS 191220..192626 FT /transl_table=11 FT /locus_tag="DIP0225" FT /product="Putative secreted polysaccharide deacetylase" FT /note="N-terminal region similar to Mycobacterium FT tuberculosis CDC1551 polysaccharide deacetylase, putative FT MT1128 TR:AAK45386 (EMBL:AE006993) (291 aa) fasta scores: FT E(): 2.1e-22, 42.43% id in 205 aa" FT /protein_id="CAE48731.1" FT /translation="MNSVHFRRHTSRTRRISIFLAACLLATGCITGCTISTPNTPVSES FT DSSTSSSQSSQDVELTVDAASGMVSTNSPQLPIHVQWPVLEGHEKLSEAIAVWAEGEAR FT EFIGEYGPREVNPSELNGSGEQVRDGDVVAMRLTLEEFGGANAASMSRMFFSSGDRVWQ FT GPDVIAQDRRVDAARAVLDQLGDRVASGVSADEVAGIPNLFGDVLVEGDVVHVRLPQAS FT VLASSEGIVEVDIPAEGLLSQNGKRLLPPAPVPPPMPQLPQVQSRGAEPVDCSVLKCVA FT LTFDDGPGPYTSQILDTLDSHGVKATFFEIATAIPRFPEVVRRQVASGMEVGSHTVTHR FT QLPLLPLAEQQQEADGASDRLAEAGAPRPVMMRPPYGAWNQDTKRLGYSLILWNVDSED FT WKNRDAQVTTNNIMAQVRPGSIVLMHDIHPSTAEALPGIIDRLKEQGYTLVTVSQLLGQ FT TVPGEVYYGR" FT misc_feature 191220..191354 FT /note="Signal peptide predicted for DIP0225 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.633 between residues 45 and 46" FT misc_feature 192045..192467 FT /note="HMMPfam hit to PF01522, Polysaccharide deacetylase" FT CDS complement(192614..193987) FT /transl_table=11 FT /locus_tag="DIP0226" FT /product="Putative GntR-family regulator" FT /note="Similar to Streptomyces coelicolor putative FT GntR-family regulator SC5G8.04 TR:Q9KZB0 (EMBL:AL353872) FT (462 aa) fasta scores: E(): 8.4e-38, 36.46% id in 458 aa" FT /protein_id="CAE48732.1" FT /translation="MRPDLVTNLPITLNRTSTDPIPTQIADHIRTLVGRGLLKPGDHVP FT STRALSTQLDISRGSAVTAYEQLLAEGFLIAARGSGTCINPDLTPTPPPAHSPTPPPEP FT PAIDLTPGLPDTTTLANSSWRAAWRIACTQPPAHTPPQGLLHLREQVADHLRRMRAVVA FT SPDHIIITAGAREGFSLILHALGQDLRVGVESPGYPSLRRVPEALGSTTVPLPTDNDGL FT ITHDLPDLDAILVTPSHQYPHGGSLPAYRRTQLTTWANRTAGLIIEDDFDSELRHIGQP FT LPALFALAPQRTALLGTFSSVISPQVSCGYIVAPPHLVPHLIELRTIFGNTASGITQEA FT LAQYLSTGALRRRTQNLRRTYRRRRDTVISTLGSIPGTTLSPIVGGLHAVLTCTRPEAD FT ILQRCRQRGIIVEGLSNYWSQHPDSDLSNGIVIGFGSHDDTTLTEALHHLAWAVNYRP" FT misc_feature complement(192665..192694) FT /note="ScanRegExp hit to PS00758, ArgE / dapE / ACY1 / CPG2 FT / yscS family signature 1." FT misc_feature complement(193646..193732) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature complement(193736..193915) FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family" FT /note="HMMSmart hit to SM00345, helix_turn_helix gluconate FT operon transcriptional repressor, DNA-binding" FT misc_feature complement(193766..193816) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT misc_feature complement(193784..193858) FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT misc_feature complement(193814..193858) FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT CDS 194078..194971 FT /transl_table=11 FT /locus_tag="DIP0227" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum pyridoxine FT biosynthesis enzyme CGL0788 SWALL:Q8NS91 (EMBL:AP005276) FT (317 aa) fasta scores: E(): 1e-93, 91.21% id in 296 aa, and FT to Mycobacterium tuberculosis hypothetical 31.4 kDa protein FT Rv2606c or MT2681 or MTCY1A10.27 SW:YQ06_MYCTU (O06208) FT (299 aa) fasta scores: E(): 2.5e-82, 80.41% id in 291 aa" FT /protein_id="CAE48733.1" FT /translation="MTQETFTATTRVKRGLADMLKGGVIMDVVTPEQARIAEDAGASAV FT MALERVPADIRAQGGVARMSDPDLIEGIVNAVSIPVMAKARIGHFVEAQILESLGVDFI FT DESEVLSPADYVNHIDKWNFDVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSEA FT VKHLRTIRGEINRLRSMDEDQLYVAAKEIQAPYDLVREVAATGKLPVTLFVAGGVATPA FT DAALVMQMGAEGVFVGSGIFKSGNPAARAAAIVKATTMYDDPAAIAEVSRGLGEAMVGI FT NVADVPAPHRLAERGW" FT misc_feature 194102..194722 FT /note="BlastProDom hit to PD004958, PD004958" FT /note="HMMPfam hit to PF01680, SOR/SNZ family" FT misc_feature 194699..194806 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 194965..195522 FT /transl_table=11 FT /locus_tag="DIP0228" FT /product="Putative amidotransferase" FT /note="Similar to Streptomyces coelicolor hypothetical 21.5 FT kDa protein SCl2.12c TR:Q9L287 (EMBL:AL137778) (202 aa) FT fasta scores: E(): 2.5e-29, 49.45% id in 182 aa, and to FT Mycobacterium tuberculosis CDC1551 amidotransferase, FT putative MT2679 TR:AAK46995 (EMBL:AE007101) (198 aa) fasta FT scores: E(): 1.5e-26, 47.54% id in 183 aa" FT /protein_id="CAE48734.1" FT /translation="MVIGVLTLQGGFAEHIAILESLGVEHRRVRVPNDLLGLDGLIIPG FT GESTVMDKLARAFDLAEPLRAAINNGLPVFATCAGLIYLGTVENPAKGQQTLGCLDVVV FT RRNAFGRQVDSFDAVVDVEGIDANVAFIRAPEVISCGAGVTVTARVGDHVVGVRQGKIH FT AYAFHPESAGEVRLHQAWLASI" FT misc_feature 194977..195516 FT /note="HMMPfam hit to PF01174, SNO glutamine FT amidotransferase family" FT CDS complement(195519..195686) FT /transl_table=11 FT /locus_tag="DIP0229" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48735.1" FT /translation="MDRSEEKVFEESTVVWQWWMWAIVAAAALVLILLAWWLRKNSRKA FT QRSNLTQRSN" FT misc_feature complement(195576..195632) FT /note="1 probable transmembrane helix predicted for DIP0229 FT by TMHMM2.0" FT CDS complement(join(196003..196275,196395..196721, FT 196723..196977)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0230" FT /product="IS element transposase (pseudogene)" FT /note="Pseudogene. Similar to Shigella flexneri putative FT transposase for IS110 S0128 TR:Q9AFS5 (EMBL:AF348706) (398 FT aa) fasta scores: E(): 5.4e-25, 34.75% id in 328 aa. FT Presents frameshifts at residues 85 and 194 and lacks stop FT codon" FT misc_feature complement(196006..196233) FT /note="This hit extended beyond the end of the feature by 1 FT aa and was clipped." FT /note="HMMPfam hit to PF02371, Transposase FT IS116/IS110/IS902 family" FT misc_feature complement(196873..196950) FT /note="ScanRegExp hit to PS00217, Sugar transport proteins FT signature 2." FT CDS complement(197202..197330) FT /transl_table=11 FT /locus_tag="DIP0232" FT /product="Putative exported protein" FT /note="No significant database matches" FT /protein_id="CAE48737.1" FT /translation="MPGALINIMSSSSSQASTTRRLTATAAVTLATAPAFAAPVTL" FT misc_feature complement(197226..197330) FT /note="Signal peptide predicted for DIP0232 by SignalP 2.0 FT HMM (Signal peptide probability 0.638) with cleavage site FT probability 0.563 between residues 35 and 36" FT CDS complement(197338..198327) FT /transl_table=11 FT /locus_tag="DIP0233" FT /product="Putative fimbrial associated sortase-like FT protein" FT /note="Similar to Actinomyces naeslundii putative fimbrial FT associated protein TR:O05996 (EMBL:U85709) (280 aa) fasta FT scores: E(): 4.5e-16, 40.000% id in 215 aa, and to FT Staphylococcus aureus sortase SrtA TR:Q9S446 FT (EMBL:AF162687) (206 aa) fasta scores: E(): 1.2, 26.923% id FT in 156 aa. Note: Also similar to DIP0236 (312 aa) E(): FT 5.7e-25; 45.342% identity in 322 aa overlap, DIP2224, FT DIP2012 and DIP2225" FT /protein_id="CAE48738.1" FT /translation="MTDQPPTPNTADATPPRQDKKLNTNAIIAVVLILAGLGVLLYPVL FT ATQWNNYQQSRAAEAYSQLEKGVPPEVLNKAWEEAQQYNANLGDIDPGDAWTSSDDESS FT SAYQRYLNYLSALNETEAMGRIVLPSIKSDLPIFHGTSDRVLARGVGHLYGTDLPVGAP FT GELGEDGVIPPAPPEGRLSALSAHTGLQNATLWDNLIQIKKGDPVYVAAAGEKLKYEVR FT NIEVVTPDKTSLLRRTSNKDQVTLITCTPYGINTHRLIITAERVPMDPQGESAFDGQGT FT TWQWWMWAILAAAAIIVLLLIRWWWKNFRKQEGEEGPTTSGAGGTTES" FT misc_feature complement(order(197410..197475,198181..198246)) FT /note="2 probable transmembrane helices predicted for FT DIP0233 by TMHMM2.0" FT CDS 198371..198847 FT /transl_table=11 FT /locus_tag="DIP0234" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48739.1" FT /translation="MWRVGVYSSLRGYKRLNFCCEMLIAAYPKVGECAREGLMDKEVCI FT NAAKGRFLGLRLPELFGGSDMRLNRSCRRRNMKLAAWCMLIQCDSRGGNHAAEVREIGD FT ITKIAICQQCDFECAGPSANFKVTRLQGLRTLKAANRSESLNVEGCYALQSLLM" FT CDS 198862..200334 FT /transl_table=11 FT /locus_tag="DIP0235" FT /product="Putative fimbrial subunit" FT /note="Similar to Actinomyces viscosus type-1 fimbrial FT major subunit precursor FimP TR:Q9X4D1 (EMBL:AF106034) (535 FT aa) fasta scores: E(): 6.9e-16, 31.5% id in 530 aa. Note: FT Contains a potential sortase anchor site (LTMPG) upstream FT of the C-terminal region transmembrane domain" FT /protein_id="CAE48740.1" FT /translation="MKKNSLTIRSVTFAAVAGLSLGISAPGAVAIAEEGTQVQQTQRAN FT IDFERKGSLTLHKKKGAESEKRATGKEMDDVAGEPLNGVTFKITKLNFDLQNGDWAKFP FT KTAADAKGHETSTTKEVETSGNGTAVFDNLDLGIYLVEETKAPDGIVTGAPFIVSIPMV FT NEASDAWNYNVVAYPKNTETKTEKTVKDADQNIQDAYTYTIKADAPTWGKDKKLTAFRF FT EDELDKRLDFQKVTEVKAGDTVLGTSDYTVNDPATDGNKLVVTLTDEGLKKVKSGDKMS FT LTFEVKRKEVGNTTELKNRADVIFNNPNTDKEVKNKTNEVVTYHGKLKVVKKDGKEAGK FT VLKGAEFELYQCTSAAVLGKGPLTVDGVKKWTTGDDGTFTIDGLHVTDFEDGKEAAPAT FT KKFCLKETKAPAGYALPDPNVTEIEFTRAKISEKDKFEGDDEVTLVSEIKNIKQGTPKL FT PMTGGAGVGILAAIGAAIVAAGAWFARRGAKN" FT misc_feature 198862..198957 FT /note="Signal peptide predicted for DIP0235 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.832 between residues 32 and 33" FT misc_feature 200233..200247 FT /note="potential sortase anchor site LPMTG" FT misc_feature 200233..200250 FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT misc_feature 200245..200313 FT /note="1 probable transmembrane helix predicted for DIP0235 FT by TMHMM2.0" FT CDS 200435..201373 FT /transl_table=11 FT /locus_tag="DIP0236" FT /product="Putative fimbrial associated sortase-like FT protein" FT /note="Similar to Actinomyces naeslundii putative fimbrial FT associated protein TR:O68213 (EMBL:AF019629) (365 aa) fasta FT scores: E(): 1.2e-31, 42.802% id in 257 aa, and to FT Staphylococcus aureus sortase SrtA TR:Q9S446 FT (EMBL:AF162687) (206 aa) fasta scores: E(): 0.094, 27.559% FT id in 127 aa. Note: Also similar to DIP0233 (329 aa) E(): FT 5.2e-25; 45.031% identity in 322 aa overlap. Note: Also FT similar to DIP2012, DIP2224 and DIP2225" FT /protein_id="CAE48741.1" FT /translation="MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTS FT TLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAHEYNENRTTGPIFDPWLARFDENNS FT DYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKGMHS FT VITGHTGLANSTMFDHLNKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGK FT DYITLITCTPYGINTHRLMVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLL FT LLLRWLLKNKRDGESQETTEMMNDEGAGADD" FT misc_feature order(200510..200578,201230..201298) FT /note="2 probable transmembrane helices predicted for FT DIP0236 by TMHMM2.0" FT CDS 201366..202157 FT /transl_table=11 FT /locus_tag="DIP0237" FT /product="Putative surface anchored protein" FT /note="No significant database matches. Note: Contains a FT potential sortase anchor site (LALTG) upstream of the FT C-terminal region transmembrane domain" FT /protein_id="CAE48742.1" FT /translation="MTSHARAVRTSRRLVAAIALSAGLLGGAYGAVGVADAAKVAGLSD FT QPGVSRDYGTDTLSITLSPGNGDPVNPATGKVAGVTIKLQRLQGIDPENAADQAKVRNT FT SADKIAGWPTDRTIKAVTNEAGQVRFQGLEKGIYLVTSQAPAGAAAGEYREISPFLVAV FT PFHTVADNPRPVEGVIVAKTNSTVPPTTPPWTPPTTPSTPPPGHTPPLRETPGSGDEKE FT REQGDLALTGVQIIGLVLAAVALMGAGLLMLLITKKRKQEG" FT misc_feature 201366..201476 FT /note="Signal peptide predicted for DIP0237 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.607 between residues 37 and 38" FT misc_feature 201927..202010 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 202047..202061 FT /note="potential sortase anchor site LALTG" FT misc_feature 202062..202130 FT /note="probable transmembrane helix predicted for DIP0237 FT by TMHMM2.0" FT CDS 202163..205282 FT /transl_table=11 FT /locus_tag="DIP0238" FT /product="Putative surface-anchored fimbrial subunit" FT /note="weak similarity to Actimomyces fimbrial associated FT protein. Note: Contains a potential sortase anchor site FT (LPKTG) upstream of the C-terminal region transmembrane FT domain" FT /protein_id="CAE48743.1" FT /translation="MKTKFMGVAAALTAALALVFGVAAPGALPSLPVATAQAQDRSFTV FT TSQQRYEQKGTRFIPNYKIPADQLSGGTITLGAGTVVTLESSIRFYLAPNDADFTVYYT FT GTDGNWYETKATYKKVSVKKYEVTLPEITIGGAAEIEFKGVHRGPPNTVISAKFDVVGG FT TTQPEPEPDPAPEPQPAPEPEPGTSVNPAAPTAVDPATAPSCVEKGYINIPDTKGVDYF FT IGGELKHAGQHFYEGQKASVKVTAKPQNGYQFAAGAKTEWSFDFSGEVKDCSDSSEDPK FT PAAVEGRHFDAIGHEFAVEADPVDPTKPNAFTAKVTAESHMKYATVRIETDATFLDPQK FT YNLTLDQIEPGVTLQKRNVNIGNGFITMDVVPVKDGKPVDSAVVPKDAVFTFTNNLSEN FT KNLKIALDVYGANKSTPKPPDIISPPDGAQWVHGRVPNPPMPKRCGLRIAVVADLSTSL FT KYADSNGFDESKKAANALIDSLAGTPAELGIYNFAGGAPRNPAGSTYGQNPPYISLQSD FT DGVSRAKSIVSNWNGNGSTNWEAGLKQVAAGNYDVVYFITDGMPTYSSKAPQLGLGGEF FT VQESALNQAIDAANELKAAGTRVVPIMVDLTVGGKNAQHTTVTQDLVLKNVRFWKRGTS FT NSEPGLYFQFTNKYVDAASYVGDDTTANFEIAYKNGGFKVWERTSRGRNIDVTRDQSKW FT TYGPREVKTMGEDISGTGDTIRVEQYSQLAAQMKKIGEELALRCNGVVKVKKRIVDENG FT RAIEDGVPGWEFTLSAGGQDIIDPGNGDRVRKSLKATSSANEDRGTASWNIMSEQEQQL FT TLVETQQPGFNLYKRNDKNAVCTETRDGVMKPIEVTNDGEFGFKVKMRAKDKKLSSVSC FT VVDNYKQPETPPGKLTFKKAQYNGDKIEEIPGLGGATFEIYPSKGDQPDYSAEALYTIK FT PGQESIEVKTTGTFFLVETKAPKGLNLLAQPVKFEISVDETTKKYKISVGSTSSGQVQA FT KGEGDKMILTVADTTAGELPKTGGYGVGLVGLIGVALAGAGFLLGRRKTA" FT misc_feature 202163..202276 FT /note="Signal peptide predicted for DIP0238 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.912 between residues 38 and 39" FT misc_feature 202661..202771 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 204530..204574 FT /note="ScanRegExp hit to PS00678, Trp-Asp (WD) repeats FT signature." FT misc_feature 205184..205198 FT /note="potential sortase anchor site LPKTG" FT misc_feature 205184..205201 FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT misc_feature 205196..205264 FT /note="probable transmembrane helix predicted for DIP0238 FT by TMHMM2.0" FT stem_loop 205348..205392 FT CDS complement(join(205490..205561,205575..205949)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0239" FT /product="Putative surface-anchored protein (pseudogene)" FT /note="Pseudogene. No database matches. Note: Contains a FT potential sortase anchor site (LPSTG). Presents a FT frameshift at residue 125" FT /db_xref="PSEUDO:CAE48744.1" FT misc_feature complement(205505..205519) FT /note="potential sortase anchor site LPSTG" FT misc_feature complement(205581..205646) FT /note="1 probable transmembrane helix predicted for DIP0239 FT by TMHMM2.0" FT CDS complement(205903..206310) FT /transl_table=11 FT /locus_tag="DIP0240" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48745.1" FT /translation="MSRRSLRCRRRPLQLGAVEPALVGEKRTLSARYEVSAGFPEGAKV FT IFRANGVRVGTAQTDAEGNASVEYVFDQAGLQKITAEVREREVDGRIFSKAEAEAEPFE FT VLSAGEVETGTRLTLEDDSVDLDATPLPDPR" FT CDS complement(206336..206485) FT /transl_table=11 FT /locus_tag="DIP0241" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48746.1" FT /translation="MIRGVFFNGDEEIGHAKTSNGVAELQTIVPDEAATLQLSAVVEDF FT ENDT" FT CDS complement(206740..207051) FT /transl_table=11 FT /locus_tag="DIP0242" FT /product="Putative IS element transposase" FT /note="Similar to Burkholderia cepacia insertion element FT IS401 hypothetical 12.4 kDa protein SW:YISX_BURCE (Q51647) FT (107 aa) fasta scores: E(): 1.6e-06, 36.78% id in 87 aa" FT /protein_id="CAE48747.1" FT /translation="MVRTYSPAFREAAVRMMISHREEYKCSRWAAAVAISEKIGASPNS FT IYAWFKKSTFETIESDDFDLAYYKERIERLESEIQRLQKTIKFLRTTIIILSNSLHFG" FT CDS complement(207298..207492) FT /transl_table=11 FT /locus_tag="DIP0243" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48748.1" FT /translation="MLPPVVPTSLAAENTRTQSCAIATSNVEYKKYVKAYSFMCISYKD FT DDVVVEVTFFEISYWYFSG" FT CDS complement(207638..208117) FT /transl_table=11 FT /locus_tag="DIP0244" FT /product="Putative exported protein" FT /note="No significant database matches. Possible secreted FT protein" FT /protein_id="CAE48749.1" FT /translation="MRMKVTYNYNIQCCLTAAAKAFALFLFAIPPASAQPSGITSIIRW FT PVGTSDNFSSATRYRNSAWAVQQHLAGSDYLTVQLGDRQATFTRSAARLLLLGALMLGE FT ATHFEPAIGTAIDHAISQGRPYNFTLSDEELIRNWGTPQRLETAHKPRPNRGTIP" FT misc_feature complement(208016..208117) FT /note="Signal peptide predicted for DIP0244 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.996 between residues 34 and 35" FT CDS complement(208253..209263) FT /transl_table=11 FT /locus_tag="DIP0245" FT /product="Putative prephenate dehydrogenase" FT /EC_number="1.3.1.12" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT prephenate dehydrogenase MT3861 TR:AAK48225 (EMBL:AE007181) FT (323 aa) fasta scores: E(): 5.5e-49, 52.31% id in 281 aa, FT and to Bacillus subtilis prephenate dehydrogenase TyrA FT SW:TYRA_BACSU (P20692) (372 aa) fasta scores: E(): 2.7e-15, FT 31.9% id in 279 aa" FT /protein_id="CAE48750.1" FT /translation="MTINEVSRPVCVLGLGLIGGSLLRALRHKGVPAFGFNRSPSAARI FT ATKEGFDVSSSLIQTLERAEAENALIVLATPMPAIASLLDALQEHAPSCGFTDVVSVKE FT AVYDLVKSRGLQSRYVGGHPMAGTANSGWEASYPELFVRAPWVVTYDFAPEADAEWVGL FT WTDVVNMAGTVGAEVIPARVEAHDAAVARISHLPHVFAEALAIVGDNGGALALSLAAGS FT FRDSTRVAGSAPSLVRAMCETNAQALLGALDEALTLLNDARAHLTEAHPNLEELIDAGY FT RSRVRFEARSGGNASESVGPTKISNRPVFRFHPGSDGWIAQLKQAEGLGARIEIF" FT misc_feature complement(208412..209230) FT /note="HMMPfam hit to PF02153, Prephenate dehydrogenase" FT CDS 209301..209753 FT /transl_table=11 FT /locus_tag="DIP0246" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.9 kDa protein Rv3753c or MTV025.10c TR:O69720 FT (EMBL:AL022121) (166 aa) fasta scores: E(): 1e-20, 45.57% FT id in 147 aa" FT /note="Conserved hypothetical protein" FT /protein_id="CAE48751.1" FT /translation="MKSNFAVTVARVNATWQVRAFNDDYSSLKRSIDAVRTLGAEGAAF FT AMLSIEDDYFVLVRPTPQGVKLLISDATAATEDDFAADILDELDADQPDPEDTPYAEGD FT FDILADLGLSEQIMSIITDETDWWASEQLQRIAEELGFDDELEQAL" FT misc_feature 209774..210082 FT /note="HMMPfam hit to PF00383, Cytidine and deoxycytidylate FT deaminase zinc-binding region" FT CDS 209792..210235 FT /transl_table=11 FT /locus_tag="DIP0247" FT /product="Putative cytosine deaminase" FT /EC_number="3.5.4.12" FT /note="Similar to Bifidobacterium longum cytosine deaminase FT TR:Q9F9W7 (EMBL:AF160969) (143 aa) fasta scores: E(): FT 1.2e-28, 53.47% id in 144 aa, and to Mycobacterium FT tuberculosis CDC1551 cytidine and deoxycytidylate deaminase FT family protein MT3859 TR:AAK48223 (EMBL:AE007181) (152 aa) FT fasta scores: E(): 6.9e-28, 53.47% id in 144 aa" FT /protein_id="CAE48752.1" FT /translation="MMREAITLAHTTPPADIPVGAIIYGPDGTILGRGTNRRETDHNPL FT GHAEIMAITQACTQRGDGWRLTDCTLAVTLEPCTMCAGALVGSRIGHIIFGAYEPKTGA FT CGSAFDVVRDPAVLHTVQVRGGILEAECAELMTNFFGGLRTEA" FT misc_feature 209930..210046 FT /note="ScanRegExp hit to PS00903, Cytidine and FT deoxycytidylate deaminases zinc-binding region signature." FT tRNA 210284..210371 FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:210318..210320,aa:Ser) FT /note="tRNA Ser anticodon CGA, Cove score 55.08" FT stem_loop 210438..210539 FT /note="Score 58: 22/24 (91%) matches, 0 gaps" FT CDS 210640..211152 FT /transl_table=11 FT /locus_tag="DIP0248" FT /product="Putative excisionase" FT /note="Similar to Arthrobacter spTM1 putative excisionase FT TR:Q9LCU5 (EMBL:AF042490) (174 aa) fasta scores: E(): FT 4.4e-21, 41.07% id in 168 aa" FT /protein_id="CAE48753.1" FT /translation="MSLSERTYFPPAEEGELSKVESFLAVYKDRHGTEARPQFFLSGSN FT EGEQIPLPKELYEILVRTVEALASGKAVTIHPNDPLVTTQQAAELLGVSRPTVVKLIED FT GKLEATKVTRHRRIKLEDVLRYQERQTIEQLDFLASTTSDAPALTESEYVSVRKMLANK FT RKESRIG" FT misc_feature 210883..210948 FT /note="Predicted helix-turn-helix motif with score 1896 FT (+5.64 SD) at aa 82-103, sequence VTTQQAAELLGVSRPTVVKLIE" FT CDS 211399..211599 FT /transl_table=11 FT /locus_tag="DIP0249" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48754.1" FT /translation="MSSLCQNFLAFAAFPQVGNIRNGLIWHELLIPPAEPREPREPAEP FT PKPANPNQGLHWKTISRSLVV" FT CDS 211613..213949 FT /transl_table=11 FT /locus_tag="DIP0250" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT transport protein sce87.17C TR:Q9RKC1 (EMBL:AL132674) (745 FT aa) fasta scores: E(): 2.9e-36, 42.48% id in 798 aa" FT /protein_id="CAE48755.1" FT /translation="MAAFLYRVGAWSFRAKWFVIVTWLVVLAAVGGAAAAFQAGFNDLF FT TINNTPAKTATEIYLENFPEQRNPLKSTGVNIVFKAPEGHTLAEPENKAAMDSVVQAIQ FT DNLEGLTNTQRFGNPVELNPKLQQGVIDLMTQRGVPEENARADAANLSLITPDETIGYT FT TFDIDVPMPADVSDAQRQAITDAMNLGREKGLTVEAGGAGFGDPIVIEETSEIIGVAIA FT AIILIFTFGSLVAAGLPLLIAVIGVGIGSLSITLATAWVSLNNVTPVLAVMLGLAVGID FT YSLFIMFRYRRELLHLDKEQAAGMAVGTAGSAVVFAGLTVIIALVALAVANIPFLTYMG FT LAAAFTVFIAVLIALTMVPALLGALGDKAFAVRLRRKRRTSPARTLGRKWGELVHRAPG FT VVIAVSVVTLGALTLPALQLHLSLPSDTQASYSSTQRKQAEIMAEGFGPGINSPFLVVA FT DAHSVDENAEILEPLIRAQNPAPGERKQAAANAAYQYIIQKYSVTPDVKHVQIVGLSKD FT GLAAQLLLTPESSPEDDVTKQLIDALLIKQDEVNNATGIRSGITGLIPVQQDVTNRLAG FT VMPLYLGIVVGLAVLLLMIVFRSIWVPVVAGVGFLLSVGAAFGVTVLFWQEGLWGLVDT FT PSPIIAFMPIFLIGVCFGLAMDYQVFLVSAMRERFVHGRIDATSRYNAIEESIVEGFAS FT SVRVVTAAALIMIAVFVAFIGQPIPFIKIFGFALGAGVLFDAFFIRMAFVPAAMFLLGR FT QTWYMPHWLDKVLPRLDVEGTSLER" FT misc_feature 211613..211720 FT /note="Signal peptide predicted for DIP0250 by SignalP 2.0 FT HMM (Signal peptide probability 0.939) with cleavage site FT probability 0.419 between residues 36 and 37" FT misc_feature order(211661..211729,212258..212326,212330..212398, FT 212408..212476,212537..212605,212642..212710, FT 212801..212869,213332..213400,213419..213487, FT 213530..213598,213704..213772,213800..213868) FT /note="12 probable transmembrane helices predicted for FT DIP0250 by TMHMM2.0" FT misc_feature 212246..212317 FT /note="FPrintScan hit to PR00702, Acriflavin resistance FT protein family signature" FT misc_feature 212309..212704 FT /note="ProfileScan hit to PS50156, Sterol-sensing domain FT (SSD) profile." FT misc_feature 212405..212479 FT /note="FPrintScan hit to PR00702, Acriflavin resistance FT protein family signature" FT misc_feature 212627..212698 FT /note="FPrintScan hit to PR00702, Acriflavin resistance FT protein family signature" FT repeat_region 214119..214410 FT /note="repX" FT CDS 214616..215908 FT /transl_table=11 FT /locus_tag="DIP0251" FT /product="Putative tRNA-ribosyltransferase" FT /note="Similar to Archaeoglobus fulgidus putative queuine FT tRNA-ribosyltransferase Tgt or AF1485 SW:TGT_ARCFU (O28787) FT (403 aa) fasta scores: E(): 8.6e-40, 40.78% id in 407 aa, FT and to Escherichia coli queuine tRNA-ribosyltransferase Tgt FT or B0406 or Z0505 or ECS0457 SW:TGT_ECOLI (P19675) (375 aa) FT fasta scores: E(): 4.5e-13, 37.68% id in 406 aa" FT /protein_id="CAE48756.1" FT /translation="MTDTTFELRTELDDAPGRHGRTGVIHTPHGDINTPAFIPVATKAT FT VKTLTPQQIRDTGAQAILSNAYHLYLQPGPDIVDEAGGVSKFENWHGPTYTDSGGFQVM FT SLGVGFKKVLAMDTAGLVEGDIRAPKKDRYAQVDEDGVDFRSVIDGSRHRFTPEVSMQI FT QHRLGADIIFAFDELTTLVDTRQYQESSVERTHRWARRCLIEHDRLTREREGKPLQSLW FT GVVQGAQYEDLRRQAVRGLLDLDKEAEDNGRRGFGGFGIGGALEKENLGTIVGWVCDEI FT PQHKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRRGGVYTLDGRVNLTAARFKRD FT FRQVDEEFGGPIAEYSRAYIHHLFKAKEFLGGTLCTMHNVAFMIQLVDNIRSAINNGDF FT EAYRDEFLGRYYASKGGPAAAGRSGGMIYGV" FT misc_feature 215087..215839 FT /note="HMMPfam hit to PF01702, Queuine FT tRNA-ribosyltransferase" FT CDS 215918..216811 FT /transl_table=11 FT /locus_tag="DIP0252" FT /product="Putative glutamyl-tRNA synthetase" FT /note="Similar to Escherichia coli glutamyl-tRNA synthetase FT GltX or B2400 SW:SYE_ECOLI (P04805) (471 aa) fasta scores: FT E(): 1.6e-25, 35.38% id in 260 aa" FT /protein_id="CAE48757.1" FT /translation="MGTFQGAGRYAPSPSGDLHFGNVRTAVLAWLFARHTGRRFLIRVE FT DVDTQRSSLESAARQLEDLHALGMDWDAAPTYQHNNFDRYEQALRNLPHYECYCSRKDI FT QEASRAPHTIPGQYPGTCRNLTEVQREERRQALAKQGRVPALRLRADVPTWHVRDYYAG FT DVLGDVDDMILRRGGQQPDWAYNLAVVVDDAADGIDQVVRGNDLLTSAPRQAYLAHLLG FT VPAPTYVHVPLVLNAAGQRLAKRDGAVTMREMPDILPRVAESLGLSARTLPGMLEEFDP FT DRFSQQPWIFAIHKEV" FT misc_feature 215942..215980 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 215942..216172 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q)" FT misc_feature 215984..216019 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 216029..216070 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 216464..216496 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 216470..216667 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q)" FT misc_feature 216512..216538 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT CDS 216891..218279 FT /transl_table=11 FT /gene="gntP" FT /locus_tag="DIP0253" FT /product="gluconate permease" FT /note="Similar to Corynebacterium glutamicum gluconate FT permease GntP TR:Q9AL75 (EMBL:AJ296014) (463 aa) fasta FT scores: E(): 2.9e-113, 69.34% id in 460 aa, and to Bacillus FT subtilis gluconate permease GntP SW:GNTP_BACSU (P12012) FT (448 aa) fasta scores: E(): 4.8e-53, 38.58% id in 451 aa" FT /protein_id="CAE48758.1" FT /translation="MEDWVPTLSAGPLLGIAAAAIALILVLVIVFKLHAFLTLIIVSAA FT TGLAAGIPLEGIVPTMTKGFGSTLASVALLVGLGAMLGRLVETSGGAKSLAETLVARFG FT EQRAPFALGVASLLMGFPIFFDAGLIVMLPVIFAVARRLNGPVLAYGIPAAGAFSVMHI FT YLPPHPGPISAAEFYSADIGLVMLLGLIIAIPTWLISGLWLGKTLGRRYPLPVPDILAG FT GPQATDVKNPATPGLIVSLLLLPMLLIFGNTSMGLATSAGWVDKSSSLVRALQFVGSTP FT IALLISTLVALYFLGIRRGQPKADLEKLLDGALGPICSVVLITGAGGMFGGVLRTSGIG FT DALADSMSDLGVPVVLGCWLVAAILRLAQGSATVALTTAAALMAPAVAAGGYSEFQIAL FT MVLASAAGSVFAGHVNDSGFWLVGRLMGMDVATTLRTWTLNQALVGAVGFVFVLVFYGV FT SFAF" FT misc_feature 216891..217022 FT /note="Signal peptide predicted for DIP0253 by SignalP 2.0 FT HMM (Signal peptide probability 0.635) with cleavage site FT probability 0.357 between residues 44 and 45" FT misc_feature order(216915..216983,216993..217061,217080..217148, FT 217242..217310,217323..217391,217434..217502, FT 217599..217667,217710..217778,217815..217883, FT 217926..217985,218004..218063,218091..218159, FT 218196..218264) FT /note="13 probable transmembrane helices predicted for FT DIP0253 by TMHMM2.0" FT misc_feature 216921..218264 FT /note="HMMPfam hit to PF02447, GntP family permease" FT CDS complement(218276..218779) FT /transl_table=11 FT /locus_tag="DIP0254" FT /product="Putative transferase" FT /note="Similar to Streptomyces coelicolor putative FT gluconokinase SCI52.21 TR:Q9AD88 (EMBL:AL590507) (175 aa) FT fasta scores: E(): 4.2e-33, 60.39% id in 154 aa, and to FT Escherichia coli thermosensitive gluconokinase IdnK or GntV FT or B4268 SW:IDNK_ECOLI (P39208) (187 aa) fasta scores: E(): FT 3e-20, 44.15% id in 154 aa" FT /protein_id="CAE48759.1" FT /translation="MSTAVKVVVMGVSGSGKTTVGTLLAERLGVEYRDGDDLHSQANIE FT KMASSIPLNDDDRWPWLAQVGEWLAAQLAGGVIGCSALKRSYRDVLRRECPEVVFVHVY FT GSREVLLERMNHREGHFMPASLLDSQFATLQPLENDEVGHVFDVTDSPAQIADAAARWL FT SERS" FT misc_feature complement(218726..218749) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(218871..219080) FT /transl_table=11 FT /locus_tag="DIP0255" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48760.1" FT /translation="MDALRLLGCCGFRAHFRLLELTNTKTAGRDFRAEMPSLGFRVLEF FT EKADTSRQVRTNLTPQRSPTKHIL" FT misc_feature complement(218934..218990) FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT stem_loop complement(218937..219032) FT /note="Score 69: 35/44 (79%) matches, 0 gaps" FT tRNA complement(219137..219222) FT /gene="tRNA-Ser" FT /product="transfer RNA-Ser" FT /anticodon=(pos:219186..219188,aa:Ser) FT /note="tRNA Ser anticodon GGA, Cove score 51.87" FT CDS 219238..219384 FT /transl_table=11 FT /locus_tag="DIP0256" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE48761.1" FT /translation="MPCYFANNTHASVDQANPQEDGEWVVVELLRGGGSVRLGAGLRMA FT RIP" FT CDS 219574..220833 FT /transl_table=11 FT /locus_tag="DIP0257" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3825 TR:AAK48194 FT (EMBL:AE007179) (435 aa) fasta scores: E(): 5.2e-94, 55.95% FT id in 420 aa" FT /protein_id="CAE48762.1" FT /translation="MSLKDYDAARLAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLD FT LSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIM FT FDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEGPD FT MGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALH FT TLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHAN FT VRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWT FT SPTGGYFISVDVVPGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVA FT ELEVAMDGFATCVLMAALEV" FT CDS 220837..221388 FT /transl_table=11 FT /locus_tag="DIP0258" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48763.1" FT /translation="MNFDETAVWLDGVFPGELTIHSAPAESFRVGTADLGDDMLATTLD FT FARVDTGLEAGGRDVRSEIFTVAHAGVGTEKFVELLRTLGTLLYDASGSLPAQPGQLVP FT AVGIEPFDGTDITVRHGLFVVPYVWGGEVPQCDEPDRLTVMLQLVMLTQEEFDYAVTYG FT IPELQSEIARSGIDLLDWSR" FT CDS 221399..223522 FT /transl_table=11 FT /gene="dnaX" FT /gene_synonym="dnaZX" FT /locus_tag="DIP0259" FT /product="DNA polymerase III subunit gamma/tau" FT /EC_number="2.7.7.7" FT /note="Similar to Mycobacterium tuberculosis DNA polymerase FT III subunit gamma/tau DnaX or DnaZX or Rv3721c or MT3824 or FT MTV025.069c SW:DP3X_MYCTU (O69688) (578 aa) fasta scores: FT E(): 7.5e-72, 53.57% id in 573 aa, and to Bacillus subtilis FT DNA polymerase III subunit gamma/tau DnaX or DnaH FT SW:DP3X_BACSU (P09122) (563 aa) fasta scores: E(): 1.5e-29, FT 31.22% id in 570 aa" FT /protein_id="CAE48764.1" FT /translation="MALYRKYRPASFAEVVGQEQVTQPLSVALDSGRINHAYLFSGPRG FT CGKTSSARIMARSLNCVEGPTSTPCGKCNSCISLAPNGPGNLDVTELDAASNRSVDDMR FT ELRDRAMYAPAESRYRIFIIDEAHMITRDGANALLKIVEEPPAHLIFIFATTEPEKILP FT TIRSRTHHYPFRLLTPQSMRGLLERTVASEHVAVEDSVYPLVIRAGGGSPRDTLSILDQ FT LIAGAGPDGLDYNLARMLLGATDDTLIDTTIDALAGNDNAALFQVVDDAIEAGLDPRRF FT ATDLLDRFRDLMVLQSVPDALTLGLVDAPTDRGDILRDQATHLPAGEAARLAALVNDGL FT RGLKGATSPRLLLEILCAKMLLPSAQPAATATAPAAAAPAPAPTEIPAKYERRSVRLAR FT EAAARKNAEAPAPEPAPEPKPEPKPEPRDGFATIQEKWATISDVIFKANSVAGILLSQA FT TLLGLRDDSTLVIGHNTGALAHRINDPQHAGSIVTAIKQETDLDVTIECVVGTDPKAAG FT FSEPENKKVWNPEPKPEPKPEPKPEPKPEPEPAPASDNVWGAPAPLGGGQPATPPPPPV FT ERFSPAKATAPQPPAAPQPVQEAPKPRWQQAAERGMRKMEERAKRPSFSDGVPLPPEPE FT EPDVPPDLYGYPADEGIPEPQTPQATSNYVVDHDEEEEMVREAAQGVGNRDHRDAMTVA FT VDILSEELGARQL" FT misc_feature 221498..221929 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 221507..222085 FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA)" FT misc_feature 221522..221545 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 221843..222082 FT /note="ProfileScan hit to PS50150, Replication factor C FT conserved domain." FT misc_feature 222491..222643 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 222626..222664 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT repeat_region 222632..222679 FT /note="4x PEP(A/K/R)" FT misc_feature 222947..223012 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT repeat_region 222983..223030 FT /note="4x PEPK" FT misc_feature 222983..223372 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 223019..223069 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature 223106..223183 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT CDS 223595..223915 FT /transl_table=11 FT /locus_tag="DIP0260" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis protein FT Rv3716c or MT3819 or MTV025.064c SW:Y1B6_MYCTU (O69683) FT (133 aa) fasta scores: E(): 2.7e-14, 54.16% id in 96 aa" FT /protein_id="CAE48765.1" FT /translation="MTQPDMSQILAQAQQMQAKLQEAQREILATTVTGTAGNGLVSIDM FT QGNGMVSSVTIDPKVVDADDVETLQDLLVGAFAEAHEKLGTLAEQKMGPLSQGFDGLGG FT MF" FT misc_feature 223601..223885 FT /note="HMMPfam hit to PF02575, Uncharacterized BCR, YbaB FT family COG0718" FT CDS 223919..224575 FT /transl_table=11 FT /gene="recR" FT /locus_tag="DIP0261" FT /product="recombination protein" FT /note="Similar to Mycobacterium tuberculosis recombination FT protein RecR or Rv3715c or MT3818 or MTV025.063C FT SW:RECR_MYCTU (O69682) (203 aa) fasta scores: E(): 1.1e-33, FT 62.38% id in 218 aa, and to Streptomyces coelicolor FT recombination protein RecR or SC66T3.29c SW:RECR_STRCO () FT (199 aa) fasta scores: E(): 5.7e-28, 55.04% id in 218 aa" FT /protein_id="CAE48766.1" FT /translation="MFEGPLQDLIDEFSRLPGVGPKSAQRIAFHLLHVEPADITRLQDA FT LGAIRDGVTFCRICCNISREEVCRICADSSRDRSTICVVEEPKDIQVIERTGEYTGRYH FT VLGGSLDPLANIGPRELNISQLLQRIGGVLPDRELADSTPETPLYDASPEVREVILATD FT PNTEGEATASYLARLLRDFPDLVVSRLASGMPLGGDLEFVDELTLSRALSGRLTL" FT misc_feature 224027..224152 FT /note="HMMPfam hit to PF02132, RecR protein" FT misc_feature 224084..224149 FT /note="ScanRegExp hit to PS01300, RecR protein signature." FT misc_feature 224153..224470 FT /note="HMMSmart hit to SM00493, No definition" FT misc_feature 224153..224497 FT /note="HMMPfam hit to PF01751, Toprim domain" FT CDS complement(224581..225333) FT /transl_table=11 FT /locus_tag="DIP0262" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT cobyric acid synthase MT3816 TR:AAK48185 (EMBL:AE007178) FT (231 aa) fasta scores: E(): 1.3e-31, 58.13% id in 246 aa, FT and to Streptomyces coelicolor hypothetical 26.2 kDa FT protein 2SCG58.13 TR:Q9FCA0 (EMBL:AL391017) (242 aa) fasta FT scores: E(): 6.6e-20, 42.85% id in 252 aa" FT /protein_id="CAE48767.1" FT /translation="MSELTIGLILPDVLGTYGDDGNALVLRQRARLRGISAEIHTVRLG FT EAVPEGLDLYCLGGGEDTAQILAAEHLNNDRGLRRAADSGRPILGICAGLQVLGRSFRA FT SGKIVEGVGLIDATTASLAKRTIGELQSTPTAAGFTAELTEPLTGFENHMGATILGPDA FT QPLGAVTRGVGNTDLHGITTASVSDEQVSYEGAVQGNVVCTYMHGPALARNPQLADLLL FT AKAMGIALADLAPLDLPVVDQLRKERLA" FT misc_feature complement(224584..225315) FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT CDS complement(225335..226597) FT /transl_table=11 FT /locus_tag="DIP0263" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 43.4 kDa protein Rv3712 or MTV025.060 TR:O69679 FT (EMBL:AL022121) (413 aa) fasta scores: E(): 2.3e-86, 59.95% FT id in 412 aa, and to Streptomyces coelicolor putative FT ligase 2SCG58.12 TR:Q9FCA1 (EMBL:AL391017) (412 aa) fasta FT scores: E(): 4.3e-59, 43.03% id in 409 aa" FT /protein_id="CAE48768.1" FT /translation="MSFNLRTRLAIGAAAVATTASRATGRGSGGMIGGLIAEKIDPNIM FT QSLAKTRPTALVTGTNGKSTTTRMLASAVRAQHTVATNEGGDNMDAGIISALMAGQSAS FT HVVLEVDELHVPSAADRLHPQCLILLNLTRDQLDRVGEINKIERALRDCVTAHPDMTVI FT ANCDDVLVTSVAYDAPNVVWVSAGAGWTGDSVSCPRTGSHIVRQDDHWYATKPLPNGET FT FQRPTPAWTITPDGILTPGHAEPVPLSLALPGNANRGNATQAIAAAVTCFNVPLDDAVR FT AVETVDDVAGRYSTITLGEHQIHLLLAKNPAGWQEALSMVDRTAEGLVIAVNGQVADGE FT DLSWLWDVKFEELEELSVKAAGERGTDLSVRLTYASVDHELVRDPLAAIKACPAGRVEV FT LANYTAFRDLKRAITAATKEA" FT misc_feature complement(226193..226429) FT /note="HMMPfam hit to PF01225, Mur ligase family, catalytic FT domain" FT CDS complement(226618..227739) FT /transl_table=11 FT /locus_tag="DIP0264" FT /product="Putative helicase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 DNA FT polymerase III, epsilon subunit MT3814 TR:AAK48182 FT (EMBL:AE007178) (329 aa) fasta scores: E(): 1.3e-07, 25.37% FT id in 335 aa, and to Bacillus subtilis probable FT ATP-dependent helicase DinG homolog SW:DING_BACSU (P54394) FT (931 aa) fasta scores: E(): 0.48, 24.07% id in 108 aa" FT /protein_id="CAE48769.1" FT /translation="MNVSLPTRPPARLFPMTNKDQEERDKARAQRAAEQAAARKAEIEK FT APYVALSVQASGIHPSTSRLVTIDAVTFTEQGEEVDHFFAVLNPESNPGPFHLHGLSPE FT QIQEGKRYSQILKALDRLIDGRTLLVHNAELVWGFIVSESKRAMSNAARANRSRSRQRN FT RRRQRVGHIPKPVTIVDTLATARRLGLTFADIRIRNVATQLGLEAPDARASVARAQADT FT AQLTREDTLLVARMFFVEHAQGAVSSTSPADLRADRFGLQRSNVRVDAMEVPRVWENPG FT VYTKERGLVQGMEVVVAPEITMDPDRIIQAIVRTELAYNEKITRASSLVVCNKREDLTG FT KAMHGDRKGIPLMTDEEFLRAVEHVKPGKPAET" FT CDS complement(227743..228507) FT /transl_table=11 FT /locus_tag="DIP0265" FT /product="Putative nitroreductase" FT /note="Similar to Escherichia coli oxygen-insensitive NADPH FT nitroreductase NfsA or MdaA or Mda18 or B0851 SW:NFSA_ECOLI FT (P17117) (240 aa) fasta scores: E(): 2e-23, 36.32% id in FT 223 aa" FT /protein_id="CAE48770.1" FT /translation="MKASMNETIRTQLNHRTIREFSTEQVSEEIMEQLFAVAGRTATSL FT GMQSTSIIRVTDPQLRVRLAEIGAQEYVGRAPIYLLFIVDCHRNAGILQELGADPAGAA FT TARNFVQGFTDACLTAQNVCIAAESMGLGVNFLGNVHNDAAAVIELLQLPELTFPVVGM FT TLGWPNQEPQLKPRMATPLRTMENGYHAPDSWLEALSDYDQEMTTYYDLRDANRRVDSF FT TRQVLAKNPAAGADSDKRNHTFAIARDQGFNL" FT misc_feature complement(227983..228489) FT /note="HMMPfam hit to PF00881, Nitroreductase family" FT CDS complement(228555..230372) FT /transl_table=11 FT /gene="leuA" FT /locus_tag="DIP0266" FT /product="2-isopropylmalate synthase" FT /EC_number="2.3.3.13" FT /note="Similar to Corynebacterium glutamicum FT 2-isopropylmalate synthase LeuA SW:LEU1_CORGL (P42455) (616 FT aa) fasta scores: E(): 2.5e-205, 83.27% id in 604 aa" FT /protein_id="CAE48771.1" FT /translation="MTSPDTFISAPAAIVTPRGDKAPGQAPWNTQRNSSMAVNRYQPFH FT VEVENIDLPDRTWPQKRITKAPQWCAVDLRDGNQALIDPMSPERKRRMFNLLVNMGYKE FT IEVGFPSASQTDFDFVREIIENNMIPNDVTIQVLVQAREHLIRRTFEACEGAKNVIVHF FT YNSTSILQRDVVFRKDKAAIKKLATDAAELIKSIAVDYPDTNWRWEYSPESYTGTELTY FT AKEVVDAVVAVMDPTPENPIIINLPSTVEMITPNVYADGIEWMHRNLNRRDSIILSLHP FT HNDRGTGVAAAELGYLAGADRIEGCLFGNGERTGNVCLVTLGLNMFTQGVDPQIDFSDI FT DQIRRTVEYCNQLRVPERHPYGGDLVFTAFSGSHQDAVNKGLDAMASRVHPGATHTEVS FT WDELRGETWEVPYLPIDPKDVGRNYEAVIRVNSQSGKGGVAYIMKTDHGLALPRPMQVE FT FSSIVQEVTDAEGGEVNSKNMWDIFAREYLDSTSPVEQVSMSVNAAETENDEARIHARL FT IVNGSETTIEGHGNGPIAAYANALESLGIDVEVQEYEQHARTAGDDAEAAAYILAEVNG FT KKFWGVGIAGSITYASLKAITSAVNRALS" FT misc_feature complement(229284..230156) FT /note="HMMPfam hit to PF00682, HMGL-like" FT misc_feature complement(229503..229544) FT /note="ScanRegExp hit to PS00816, Alpha-isopropylmalate and FT homocitrate synthases signature 2." FT misc_feature complement(230103..230153) FT /note="ScanRegExp hit to PS00815, Alpha-isopropylmalate and FT homocitrate synthases signature 1." FT CDS 230521..231552 FT /transl_table=11 FT /locus_tag="DIP0267" FT /product="Putative regulatory protein" FT /note="Similar to Bacillus subtilis deoxyribonucleoside FT regulator DeoR SW:DEOR_BACSU (P39140) (313 aa) fasta FT scores: E(): 6.6e-43, 42.9% id in 303 aa" FT /protein_id="CAE48772.1" FT /translation="MNPVSCARYPTMWNMLWGVSWLGVEWGKNVHMIDARDCLALDAAK FT LYYVTGLGQAQVAKELGISRPTVSKLLSHARDKGFVTISLNDPREVAGGYVEKLCARYG FT LADVRVVQSPAMGRGLTGELGNAGAALLEEVVKDGMTVGVSWGDTMLAVSEHLRTLPLV FT DVKVVQLKGGHSHTARNTNDMVTLTRFSRALNAEMMMLPLPVILDSKEAKELVVKDRHI FT ASMLNLGAHCDVAVFTVGAVKSESLLLNLGYLSPSEQARLMEHAVGDVCSRFYDAQGEV FT ADPDIDARTVGISLADLKKRPVRVLVAGGLEKAPAIEAALRTGVATHVVIDHATAQRVV FT EMA" FT misc_feature 230674..230739 FT /note="Predicted helix-turn-helix motif with score 2347 FT (+7.18 SD) at aa 52-73, sequence LGQAQVAKELGISRPTVSKLLS" FT CDS 231758..232858 FT /transl_table=11 FT /locus_tag="DIP0268" FT /product="Conserved hypothetical protein" FT /note="C-terminal region similar to C-terminal region of FT Mycobacterium tuberculosis hypothetical 58.9 kDa protein FT Rv2100 precursor or MT2160 or MTCY49.40 SW:YL00_MYCTU FT (Q10709) (550 aa) fasta scores: E(): 7.5e-09, 35.11% id in FT 131 aa" FT /protein_id="CAE48773.1" FT /translation="MNTTGETTQPFYSHCDMNDPLCRAERLRIQFDYYRWHSLQPDDND FT DVDTYTADIATRIGKTQRYVCDHLDAIYYLTQLPQLHTVYQQLWHLDDTRLITITRIIS FT ALPTTYYDAIDTHLTRWLTPTQPAQTIPSTRAITRFLRKTITHLGFHLDNTRKPEQYVY FT IYDAGHGLAGIDALIHAGVAELLETTLRSIKKTHSCDDSTALQLLLEDKTSVVINLYDT FT GTGITYTPQGTALPQVPEHLVIRVLGDADVAVSTGYRFTEAMRRFIQGRDGVCRFPGCG FT VPAQWCDIDHVEEYDLGGVTGAVNAQCLCRHHHNVKTSRRVDCEIGAGGVVTWQIGDRR FT VVTTPEGVLAGQTFRQRREKKIKKAA" FT misc_feature 232544..232702 FT /note="HMMSmart hit to SM00507, HNH nucleases" FT misc_feature 232580..232720 FT /note="HMMPfam hit to PF01844, HNH endonuclease" FT repeat_region complement(232940..232968) FT /note="Possible inverted repeat" FT repeat_region complement(232940..234244) FT /note="repX" FT CDS complement(join(232956..233060,233065..233118, FT 233181..233387,233387..233554,233569..233826)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0269" FT /product="Putative transposase (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium glutamicum FT DNA, transposable element IS31831 TR:Q45144 (EMBL:D17429) FT (436 aa) fasta scores: E(): 1.8e-14, 39.2% id in 403 aa, FT and to Mycobacterium smegmatis TnpA protein TR:Q50440 FT (EMBL:M76495) (413 aa) fasta scores: E(): 5.4e-07, 35.42% FT id in 223 aa. Presents internal in-frame stop codons, FT multiple frameshifts at residues 86, 141, 209 and 227 and FT lacks final stop codon" FT repeat_region complement(233952..233980) FT /note="Possible inverted repeat" FT CDS 234348..235064 FT /transl_table=11 FT /gene="deoD" FT /gene_synonym="punB" FT /locus_tag="DIP0271" FT /product="purine nucleoside phosphorylase II" FT /EC_number="2.4.2.1" FT /note="Similar to Bacillus stearothermophilus purine FT nucleoside phosphorylase II DeoD or PunB SW:DEOD_BACST FT (P77835) (234 aa) fasta scores: E(): 8.6e-40, 49.56% id in FT 230 aa, and to Staphylococcus aureus purine nucleoside FT phosphorylase Pnp or SA0131 TR:Q99X79 (EMBL:AP003129) (235 FT aa) fasta scores: E(): 1.3e-60, 69.52% id in 233 aa" FT /protein_id="CAE48775.1" FT /translation="MAEKSTPHINPKGVDIAETVLLPGDPLRAKFIADTYLEDVVQFNS FT VRNMLGFTGTYQGTPVSVMGSGMGMPSIGIYSYELINFFDARNVIRVGSIGAMQKDIDL FT YEIIVAASASTDSNFLEQYNLPGTYAPTASWTLLRAFMDEADRKGKKVHVGNILSSDVF FT YNADNTVNERWARMGVLGVEMESAALYSIAAYAGANALGVFTVSDNLFTGARTTAEERE FT SAFTDMMELALPLARA" FT misc_feature 234399..235055 FT /note="HMMPfam hit to PF01048, Phosphorylase family" FT misc_feature 234540..234587 FT /note="ScanRegExp hit to PS01232, Purine and other FT phosphorylases family 1 signature." FT misc_feature 234768..234794 FT /note="ScanRegExp hit to PS00039, DEAD-box subfamily FT ATP-dependent helicases signature." FT CDS 235061..236425 FT /transl_table=11 FT /locus_tag="DIP0272" FT /product="Putative antibiotic resistance protein (membrane FT protein)" FT /note="Similar to Staphylococcus aureus SA0132 protein FT TR:Q99X78 (EMBL:AP003129) (450 aa) fasta scores: E(): FT 3.5e-67, 46.1% id in 436 aa, and to Bacillus subtilis FT tetracycline resistance protein TetB or Tet SW:TCRB_BACSU FT (P23054) (458 aa) fasta scores: E(): 1.3e-23, 26.3% id in FT 403 aa" FT /protein_id="CAE48776.1" FT /translation="MTTHNATLKPTDPKAAVPVLLFSFVFCLIVDNGFKTMTGPMAEGL FT GIDPNTASLQASLAGVIIGIGAVVYAALADAISIRKLMLIGIGLVVVGSVIGFVFSGSW FT PLVLAGRLIQTGGLAAAETLYVIYVTKHLAAEDQKTYLGFSTAAFQSGLLVGALTSGAI FT STYIGWRVMFLVPLILIVAVPFILKTVPEEEASSSHLDVVGLFLIAIFATSVIQYMQAF FT KLFWLAFMLVSIVIFVWYVRNAKNPVVNPEFFKNGRYVWAILLVLIVYSTQLGYIVLLP FT FAAKEFHGLDQAQASYLMIPGYICAVLIGIFSGKIGKLMTSRRTIFTALGMIIVALVVG FT ALAIQVHVAVAIASIILFASGFALLYAPLVNTALANILPEKSGVAIGFYNLTINIGVPL FT GIAYTFKLMNLSIGTNAVIWILAAIAVVGAVMYFIADRALFSREKAAGIDSVANH" FT misc_feature 235124..236380 FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature order(235211..235279,235313..235381,235394..235447, FT 235481..235549,235559..235627,235664..235717, FT 235730..235783,235841..235909,235937..235996, FT 236033..236092,236102..236170,236207..236275, FT 236303..236362) FT /note="13 probable transmembrane helices predicted for FT DIP0272 by TMHMM2.0" FT misc_feature 235295..235363 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235391..235453 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235556..235630 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235733..235789 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235835..235912 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 235940..236014 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT CDS 236460..237116 FT /transl_table=11 FT /gene="deoC" FT /locus_tag="DIP0273" FT /product="deoxyribose-phosphate aldolase" FT /EC_number="4.1.2.4" FT /note="Similar to Mycobacterium tuberculosis FT deoxyribose-phosphate aldolase DeoC or Rv0478 or MT0496 or FT MTCY20G9.04 SW:DEOC_MYCTU (Q11138) (224 aa) fasta scores: FT E(): 2.4e-37, 57.07% id in 219 aa, and to Bacillus subtilis FT deoxyribose-phosphate aldolase DeoC or Dra SW:DEOC_BACSU FT (P39121) (211 aa) fasta scores: E(): 3.2e-25, 46.53% id in FT 202 aa" FT /protein_id="CAE48777.1" FT /translation="MTTRNDVAQMIDHTLLKPEATTDDFKALIADAVRLGTYSVCVSPS FT ALPVEVPENLHVATVVGFPSGAVKPEIKAAEAARTVADGAEEVDMVINIALAKEGKFDE FT LEAEIKAVRDAVPAPGILKVILETAALTDDEIVAACKASENAGADFVKTSTGFHPAGGA FT SVHAVEIMHATVGGRLGIKASGGIRTAKDALAMIEAGATRLGLSASAAILEELGE" FT misc_feature 236472..237101 FT /note="HMMPfam hit to PF01791, Deoxyribose-phosphate FT aldolase" FT misc_feature 236988..237095 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 237124..238776 FT /transl_table=11 FT /locus_tag="DIP0274" FT /product="Putative mutase" FT /note="Similar to Streptomyces coelicolor putative FT phosphomannomutase SCK13.08c TR:Q9AD82 (EMBL:AL512667) (549 FT aa) fasta scores: E(): 7.9e-86, 46.75% id in 554 aa" FT /protein_id="CAE48778.1" FT /translation="MSYAELERTAREWADHDPDPRTKETIEGWLKTHDEESLQQAFNGP FT LTFGTAGLRARVGAGESQLSLAVILRTTYGLVDWVKTQLGADATPTIVIGCDARHGSLE FT FHQAAAEVVSAAGGRALLLPAKNPTPLTAFSVKKFGADAGIMVTASHNPPADNGYKVYL FT GGRIAQGPAEGVQLISPADKEISEAIAAAPYADEIPRTTDNIEHVDPREDYLTRALTLA FT DKKSDILIALTAMHGVGAALGEKVLTAAGFNVSLVPEQAEPDPDFPTVSFPNPEEKGAL FT DLAKAHANTIGADVIIAYDPDADRCAVATPDANAEGGWRQLSGDETGAVLGAYRASVAK FT PGSMANSIVSGRLLSKIAEAAGRTHATTLTGFKWIARTPELVFGYEEAIGFCCDPEAVA FT DKDGVSASVVVASLVSALKAEGRTLDDALDDLAREHGLYQTAPLTFRVDDLSIIARAMS FT TLRAQPPTELAGATVTEVTDLNDPTLPWGATDGMMFITDHNDRIICRPSGTEPKLKCYL FT EVVMPVTGDTIPRAEAAQRLDAIATALRTHLGM" FT misc_feature 237247..237687 FT /note="HMMPfam hit to PF02878, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain I" FT misc_feature 237550..237594 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 237553..237582 FT /note="ScanRegExp hit to PS00710, Phosphoglucomutase and FT phosphomannomutase phosphoserine signature." FT misc_feature 237757..238068 FT /note="HMMPfam hit to PF02879, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain II" FT misc_feature 237802..237861 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 238000..238047 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 238090..238416 FT /note="HMMPfam hit to PF02880, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain III" FT misc_feature 238489..238740 FT /note="HMMPfam hit to PF00408, FT Phosphoglucomutase/phosphomannomutase, C-terminal domain" FT CDS 238823..239860 FT /transl_table=11 FT /locus_tag="DIP0275" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein 2SCI34.05 TR:Q9EWX4 (EMBL:AL445403) (396 FT aa) fasta scores: E(): 1.3e-08, 28.77% id in 358 aa" FT /protein_id="CAE48779.1" FT /translation="MNKVLTALALVAATTALRLGAFAIAGATAGIPNAITTAALKWDAD FT QYLTIARDGYLANPETSVAFFPGLPMAMRMLSVITHLPLEASGLIIVTIATAALALAVM FT RLAELMGIATPSGRIVATLVVLLAPMSGTFTMVYTEAPFMALSFWAIVAMMQERWRQAT FT LLVALAGLVRLTGIDLVATFAIVLLLASKRHLPLAVIAPLPTASYLAWASWVTRDAGGY FT FGIQEKGWGSGFDGGISTINWIVHSLHEPIRLGYILSSASMVIAVIALVVAYPRLPLAP FT WLFSLFIGLNVLLSGGIMHSRPRLLLPMVLLALPFIRTWPAVILWSLGGLAISAYMIVV FT FPWAI" FT misc_feature 238823..238891 FT /note="Signal peptide predicted for DIP0275 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.346 between residues 23 and 24" FT misc_feature order(238832..238900,239066..239134,239177..239278, FT 239312..239380,239408..239467,239576..239644, FT 239657..239725,239786..239854) FT /note="8 probable transmembrane helices predicted for FT DIP0275 by TMHMM2.0" FT CDS complement(239862..240698) FT /transl_table=11 FT /locus_tag="DIP0276" FT /product="Putative membrane protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 29.6 kDa protein in leuA-lysC intergenic region FT SW:YLEU_CORGL (P42459) (270 aa) fasta scores: E(): 4.6e-47, FT 58.18% id in 220 aa" FT /protein_id="CAE48780.1" FT /translation="MYSNFLAMAFALASALTIAWGTVVRHRIAEETDGSPLLEAVTRFR FT WWVGSLTALLGYALQVVALGFGTLLVVQPILVLSLMFTLPLSARYDGRRPSRDEMGWAG FT ALTVAVAVLVVLGKPAAGDPQPPMDRWLISLGIGAVILLTLWFVSGSLALNTRALVLGA FT ITGGVYGYVAVLSKATVDIMTHGGITTLVFSWQGYSLLFGAILGTVIQQYAFNAGPLKN FT SLPAMTIVEPIVAFALGYAVLGEQFQVYGLNWAFMAAALVTMVVSTFALSWRGVGS" FT misc_feature complement(order(239871..239936,239967..240032, FT 240069..240125,240171..240221,240237..240302, FT 240348..240398,240435..240488,240501..240566, FT 240627..240683)) FT /note="9 probable transmembrane helices predicted for FT DIP0276 by TMHMM2.0" FT misc_feature complement(240618..240698) FT /note="Signal peptide predicted for DIP0276 by SignalP 2.0 FT HMM (Signal peptide probability 0.979) with cleavage site FT probability 0.323 between residues 27 and 28" FT CDS 240889..242154 FT /transl_table=11 FT /gene="lysC" FT /gene_synonym="ask" FT /locus_tag="DIP0277" FT /product="aspartokinase" FT /EC_number="2.7.2.4" FT /note="Similar to Corynebacterium flavum aspartokinase LysC FT or Ask SW:AK_CORFL (P41398) (421 aa) fasta scores: E(): FT 1.8e-135, 87.64% id in 421 aa" FT /protein_id="CAE48781.1" FT /translation="MALVVQKYGGSSLESAERIRRVAERIVATKKQGHDVVVVCSAMGD FT TTDELLDLAAQVNPVPPAREMDMLLTAGERISNALVAMAIESFGAKAQSFTGSQAGVIT FT TERHGNARIVDVTPGRVREALDEGKICLVAGFQGVNRESKDVTTLGRGGSDTTAVALAA FT ALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLCFEEMLELAASGSKILVLRSVEYARA FT FGVPLRVRSSYSNDPGTLVAGSMEDIPVEEAVLTGVATDNSEAKITVLGIPDSPGSASA FT VFRALADAEINIDTVLQNISSLEDNRTDITFTCPRADGPHAMELLRNLQAKNDWQNVLY FT DDQIGKVSLVGAGMKSHPGVTAEFCEALRDAGVNIELISTSEIRISVLIRESDVDVAAR FT AIHEKFELGGETEAIVYAGTGR" FT misc_feature 240892..241581 FT /note="HMMPfam hit to PF00696, Amino acid kinase family" FT misc_feature 240901..240927 FT /note="ScanRegExp hit to PS00324, Aspartokinase signature." FT misc_feature 240985..241029 FT /note="FPrintScan hit to PR00474, Glutamate 5-kinase family FT signature" FT misc_feature 241345..241428 FT /note="FPrintScan hit to PR00474, Glutamate 5-kinase family FT signature" FT misc_feature 241684..241911 FT /note="HMMPfam hit to PF01842, ACT domain" FT misc_feature 241930..242127 FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 242501..245743 FT /transl_table=11 FT /locus_tag="DIP0278" FT /product="Putative surface-anchored membrane protein" FT /note="Low similarity to Staphylococcus aureus Ser-Asp rich FT fibrinogen-binding, bone sialoprotein-binding protein SdrE FT or SAV0563 TR:BAB56725 (EMBL:AP003359) (1141 aa) fasta FT scores: E(): 1.9e-05, 21.85% id in 668 aa. Note: Contains a FT potential sortase anchor site (LARTG) upstream of the FT C-terminal region transmembrane domain" FT /protein_id="CAE48782.1" FT /translation="MVDSRFYEPLGFRRSPIRRLITLLMVVVVCVGLVVSPRVPSAGAA FT ECKGEISNVQWKNDTNIKDGVFVGSYGQGADVQFDWKVDPGAKAGDQFTLKLPNELSRL FT GNKDLTLTAPSGEEVAKGTWDDVAKTWTFTLTDYANSHGDISGSAFFTVQWDRSVAQSN FT TQYPLTFSGCKGAGTLNGKTPEEGVGGTAQATSKTGLYDSKTDSARWNIYVETADTDIY FT TPVVVKDIGNTQLLFRCSDVKVFDRTPYPHTKIRDTPIDPNRWKCEEKDGGIIVSMVPD FT EHGRYLTAGQSLTIGFETPINDDTSRFITNKAIVEISPNKIENVEYSVDRGDAGGVGQG FT FQGKIKIQKEVVGETAPVQGNKFDFEYKCGETTQNISVAAGQTSDIFTQRSSSTCSITE FT KNVAEGVTVDFEVIDEETGKPAYVVPIDNGVTVKFNKNSSTTLNVKVTNTYPNKPEAKK FT GKFVIKKTVNGLDAGQKDKAFKFNYTCKAPDGDAYTEPQLAEVTAGRTWQSGNYPEGTI FT CTIEEDLESAKVPGYSLISAQPKGDVTIKAEGTEGSPVEFAATNSYTKDLGSFSVQKKI FT EASAEAMPLLKDQEFGFKYTCGADKGEFKLKNGETKKVERIATGTKCTVEESDAKVPNG FT FMWTGKIEGTDLDPNDFTIVKDKTLAFTATNTYKQQYGGFTLSKNVTGDATNLEELQKR FT SYTFNYTCTAPTGTVLKDKVEITEETPKAIGNIPAASTCKVTEVEAPAKDTDWTVDLSV FT NGTWVGETAEFKVPAEGEPSISILAKNNYRQHKGSFTIEKIVDASEGIVTPKEFTFTWQ FT CGEDKGAETVRVTNGKGRVEIDRAFPVGTKCSVKELEAEAEDARLITSWENQEFTIDKD FT KQHVIVSATNTYRYAESKVKIVKKLEGPAKDKAKDKTFTFDYSCVVNNEAIEGSVNITG FT EGATEIPESFPAGTKCTITERDASISGTTWTHRIAEDGQITIQSPAKVYQVGVTNAYSK FT PGFPWFIPLIPLVIIPFLPLFPHPTPAPQPAPQPTPQKPSEQQPSPKAPEKKPQKEKKV FT LARTGANVWMFIVIAVLLVLLGAFLRRRGNNS" FT misc_feature 242501..242632 FT /note="Signal peptide predicted for DIP0278 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.918 between residues 44 and 45" FT misc_feature 243026..243049 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 245468..245626 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 245645..245659 FT /note="potential sortase anchor site LARTG" FT misc_feature 245666..245719 FT /note="1 probable transmembrane helix predicted for DIP0278 FT by TMHMM2.0" FT CDS 246016..247047 FT /transl_table=11 FT /gene="asd" FT /locus_tag="DIP0279" FT /product="aspartate-semialdehyde dehydrogenase" FT /EC_number="1.2.1.11" FT /note="Similar to Corynebacterium flavum FT aspartate-semialdehyde dehydrogenase Asd SW:DHAS_CORFL FT (P41400) (344 aa) fasta scores: E(): 3.3e-100, 79.3% id in FT 343 aa" FT /protein_id="CAE48783.1" FT /translation="MTTVAVVGATGQVGRVMRSILEERDFPLDTIRFFASARSAGTTLP FT YKGQEIEVEDLALQIEESLAGIDIALFSAGGSTSKQYAPLFAAAGATVVDNSSAWRKDD FT EVPLIVSEVNPDAKNDVVKGIIANPNCTTMAIMPVVKALHDAAGVTKLHVSSYQAVSGS FT GLAGVETLIKQVAEIGDRAVELVHDGSLLAPEDMGPYVAPIAFNALPFAGNLVEDGTEE FT TDEEQKLRNESRKILGLPDLKVAGTCVRVPVFTGHTMVVHAEFNNAITPEQAREVLGNA FT AGVDVVDVPTPLAAAGVDNSLVGRIRQDQTVDDNKGLVFVVSGDNLRKGAALNAIQIAE FT LLV" FT misc_feature 246016..246396 FT /note="HMMPfam hit to PF01118, Semialdehyde dehydrogenase, FT NAD binding domain" FT misc_feature 246421..247002 FT /note="HMMPfam hit to PF02774, Semialdehyde dehydrogenase, FT dimerisation domain" FT misc_feature 246745..246789 FT /note="ScanRegExp hit to PS01103, Aspartate-semialdehyde FT dehydrogenase signature." FT CDS complement(247054..247620) FT /transl_table=11 FT /gene="sigC" FT /locus_tag="DIP0280" FT /product="Putative RNA polymerase sigma factor" FT /note="Similar to Mycobacterium tuberculosis probable RNA FT polymerase sigma-C factor SigC or Rv2069 or MT2129 or FT MTCY49.08 SW:RPSC_MYCTU (Q10679) (185 aa) fasta scores: FT E(): 6.1e-30, 52.24% id in 178 aa" FT /protein_id="CAE48784.1" FT /translation="MNMKPSERDDDYVTALALKAGRGDRAALTAFIRATQTDVWRLLAH FT LGGTDIADDLTQETYLRVMSALPRFAARSSARTWLLSLARRVWVDNIRHDMARPRKSAA FT EVEQCDGTTSSLWAEWVDVRMLIDALPAERREALILTQVLGFSYEEAAKIADVRIGTIR FT SRVARARADIVAAAATETDTNEAAG" FT misc_feature complement(247120..247185) FT /note="Predicted helix-turn-helix motif with score 1077 FT (+2.86 SD) at aa 150-171, sequence FSYEEAAKIADVRIGTIRSRVA" FT misc_feature complement(247336..247500) FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily)" FT CDS 247748..249286 FT /transl_table=11 FT /gene="cat" FT /locus_tag="DIP0281" FT /product="Catalase" FT /EC_number="1.11.1.6" FT /note="Similar to Onchocerca volvulus endobacterium FT catalase Cat SW:CATA_ONCVE (Q27710) (482 aa) fasta scores: FT E(): 8e-92, 52.24% id in 490 aa" FT /protein_id="CAE48785.1" FT /translation="MTSPVDPILNKGERTEAAPHTTRAGGQPVASENISITAGPQGANV FT LNDLHLIEKLAHFNRERVPERNPHAKGHGAFGELHITEDVSQYTKAKLFQKGTVTPMAV FT RFSTVAGEKGSPDTWRDVHGFALRFYTQDGNYDIVGNNTPTFFLRDAMKFPDFIHSQKR FT LGSSGLRDADMQWDFWTRTPESAHQVTYLMGDRGTPKTSRHQDGFGSHTYQWINEDGQP FT VWVKYHFKTRQGWETFTDAEAQEMAGKNADYQREDLYNAIERGDFPIWDVKVQIMPFDE FT AETYRWNPFDLTKTWSQKDYPLIDVGYFVLNRNPQNFFAQIEQLALDPANLVPGVGLSP FT DRMLMARAFAYADAQRYRIGPNYQQLPINQPVVPVNTYQHEGPMAYHFNPADAPVHTPN FT RFGKGAGYLDDGQTSSSGATYGQAQDLYVNPDPHGTDLTRAAYVKHADDDDFMQAGILY FT REVYDDAAKERFVDNVTNAMAGVSPETEERVYWYWTQVDENLGAKIREAFAAKK" FT misc_feature 247811..248962 FT /note="HMMPfam hit to PF00199, Catalase" FT misc_feature 247811..249262 FT /note="BlastProDom hit to PD000510, PD000510" FT misc_feature 247850..247921 FT /note="FPrintScan hit to PR00067, Catalase signature" FT misc_feature 248036..248092 FT /note="FPrintScan hit to PR00067, Catalase signature" FT misc_feature 248099..248152 FT /note="FPrintScan hit to PR00067, Catalase signature" FT misc_feature 248156..248212 FT /note="FPrintScan hit to PR00067, Catalase signature" FT misc_feature 248651..248734 FT /note="FPrintScan hit to PR00067, Catalase signature" FT misc_feature 248747..248827 FT /note="FPrintScan hit to PR00067, Catalase signature" FT misc_feature 248786..248812 FT /note="ScanRegExp hit to PS00437, Catalase proximal FT heme-ligand signature." FT CDS complement(249276..250334) FT /transl_table=11 FT /locus_tag="DIP0282" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Vibrio cholerae iron (III) ABC FT transporter, ATP-binding protein VC0610 TR:Q9KUB3 FT (EMBL:AE004146) (343 aa) fasta scores: E(): 7e-18, 34.743% FT id in 331 aa, and to Archaeoglobus fulgidus branched-chain FT amino acid ABC transporter, ATP-binding protein AF0221 FT TR:O30018 (EMBL:AE001090) (224 aa) fasta scores: E(): FT 9.2e-17, 34.562% id in 217 aa" FT /protein_id="CAE48786.1" FT /translation="MALIHIQGLSVTSRGARLLDDVSLEADPGELIVVLGRSGAGKSTL FT LRALAGLIPAQGVVEVDGESLAGRPPHQRPIAMMMDQPSLFPHMTVEDNIRFAGDAGAH FT VAMLSLGIDHLALRYPHQLSTGQQQKVALARALIKQPKLMFFDEPLAHVDTYSSEQLKS FT QILRTHRRLGCTTFYVTHDINEAFSIADRIIFLSHGRIVQDASPQDMREQPACLDIARH FT LGASIFVPTTGTVSHSSFGTATAAITALGTSMEVEAHPDLRSGDAMVMVGYPTSATATP FT TGQQARHLMGATGQVIRNIYMGDHHEVAIETTRGRIVLHCSPDDELAFAALGDEVLIHC FT DPEKMWVLPATS" FT misc_feature 249276..255947 FT /note="Anomalous G+C content (55.53%), G/C deviation and FT dinucleotide signature. Putative pathogencity island. Not FT present in C.glutamicum" FT misc_feature complement(249735..250253) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(249738..250250) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(249750..249968) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(250167..250244) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(250206..250229) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(250325..251878) FT /transl_table=11 FT /locus_tag="DIP0283" FT /product="Putative transport system permease (iron)" FT /note="Similar to Treponema hyodysenteriae putative FT permease ShiD TR:O54371 (EMBL:U75349) (277 aa) fasta FT scores: E(): 0.0013, 21.739% id in 184 aa, and to FT Escherichia coli O157:H7 EDL933 putative transport system FT permease protein YabK TR:AAG54371 (EMBL:AE005183) (536 aa) FT fasta scores: E(): 0.019, 21.995% id in 441 aa" FT /protein_id="CAE48787.1" FT /translation="MRTGLWIFSVVAIAAVAVGIPYAMLLKAAGTGTAAVAPIILSSTI FT ALCATLLAVGIGTVGALAAAQFSRTVVLLLDVILLFQLTIPHFVIGAGWKTIMGRTGIH FT LCSQCNFSGLGPLLFTFTVAFTPLAYFVQRTALRSVSSREVDAARVAGLHGWALFRAVY FT QPRLVLFAPALAVFIFSAALSDPVTPNVMAPRASLAATRVWFQGDQAGTALALTLPVAG FT AVVVAGLVYARLLRSNPALVELLHFAGNSSGQPHRAVGAQVRAPQAVLCFLGAVAGLFV FT LVAAFRGFVHGSETPMGNAVVNTVGLAFLVLLCSLLLSAVALGARRSCGLRWGWLGRRG FT IDAVFALLALSPGAAIGCGLQIALNHPGVYGPWASLSLVLLACLPSSLAMTYFLMVYIG FT PLMSRSEYMVSLLQGVGPLRAVASIVLPRSTNVVILGFLMVFSNASVLAVPLLWVSSPD FT TPLLMLRLFTLLDAANYPAALYISMTVSLFIVSLAGAIVVSINGVGLAAFARKQVASWR FT " FT misc_feature complement(order(250352..250417,250517..250582, FT 250679..250744,250790..250846,250910..250975, FT 251006..251071,251186..251251,251312..251377, FT 251483..251539,251600..251665,251705..251770, FT 251801..251857)) FT /note="12 probable transmembrane helices predicted for FT DIP0283 by TMHMM2.0" FT misc_feature complement(251777..251878) FT /note="Signal peptide predicted for DIP0283 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.426 between residues 34 and 35" FT CDS complement(251875..252876) FT /transl_table=11 FT /locus_tag="DIP0284" FT /product="Putative ABC-transport system iron-binding FT secreted protein" FT /note="Similar to Escherichia coli O157:H7 putative FT periplasmic-iron-binding protein ECS0415 TR:BAB33838 FT (EMBL:AP002551) (343 aa) fasta scores: E(): 5.5e-19, FT 27.139% id in 339 aa, and to Actinobacillus FT pleuropneumoniae AfuA protein TR:Q57512 (EMBL:U05042) (346 FT aa) fasta scores: E(): 4.2e-16, 26.280% id in 293 aa, and FT to Serratia marcescens iron(III)-binding periplasmic FT protein precursor SfuA SW:SFUA_SERMA (P21408) (338 aa) FT fasta scores: E(): 0.00026, 20.000% id in 290 aa" FT /protein_id="CAE48788.1" FT /translation="MLSKWLRLLAVCVVAMVSVATVYRTLFPAKTAVTIMCSNDVTVCE FT QWKRDIARELGLNVRYVSLPTQEALRRLRTGSHEFDVWVGGPSENYRLAARLGLLQAVD FT LPAADAIPGSFKDPQNQWFGVYASVLSVCSDRDALAELGVPVPRTWSDLMRPELRGWVS FT APSPVSSGTGYAMLLSMQAAGLSQDEIAAIVGNVDRFTRSGNAPSDVVAHGEAAVAISY FT EPYCQNKTTRYGRDVEISYPAEGTSFEIASGGVVAQGHNKSAAYEVMNWLLSPSGQTSA FT RRVGLPQIPTSDLVVGNISTRLKDSHGIVAVDPAVADSERDRWMSWFSEQRA" FT misc_feature complement(251884..252771) FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein" FT misc_feature complement(252676..252741) FT /note="Predicted helix-turn-helix motif with score 1105 FT (+2.95 SD) at aa 46-67, sequence QWKRDIARELGLNVRYVSLPTQ" FT misc_feature complement(252790..252876) FT /note="Signal peptide predicted for DIP0284 by SignalP 2.0 FT HMM (Signal peptide probability 0.981) with cleavage site FT probability 0.522 between residues 29 and 30" FT misc_feature complement(252796..252861) FT /note="1 probable transmembrane helix predicted for DIP0284 FT by TMHMM2.0" FT CDS complement(252957..254327) FT /transl_table=11 FT /locus_tag="DIP0285" FT /product="Putative glycerol-3-phosphate transporter" FT /note="Similar to Bacillus subtilis glycerol-3-phosphate FT transporter GlpT SW:GLPT_BACSU (P37948) (444 aa) fasta FT scores: E(): 1.4e-74, 45.434% id in 438 aa, and to FT Escherichia coli glycerol-3-phosphate transporter GlpT or FT B2240 SW:GLPT_ECOLI (P08194) (452 aa) fasta scores: E(): FT 4.2e-74, 44.295% id in 447 aa" FT /protein_id="CAE48789.1" FT /translation="MFAWLQAPGPAAPLSAEQVDRTYPRMRLQVFMGIFLGYAGFYLIR FT NNISAIAPLLIDESGAIDKPAIGIIGNAVLVSYGLSKFFSAMVSDRSNARYFLPLGLAL FT SALMNLVVAFVPWVSASVGVFATVMFLNGWFQGMGYPPCGRIVVQWFSTSERGWKGSLW FT NTSHNLGAFGLPVLVGIGLSMTGENWRAAYWLPALVALVVALVAFLLIRDNPQSVGLPP FT IDDYRNDPAKVAEDTGEKISTKDLVFKHILHSRIIMLLAIANVFVYALRYGVLHWITTY FT LSEQHHMSIGSGLIGFAAFELAGFIGTVLCGWLSDNVFKGNRSAAISLFTLGAGLSIAA FT YWLAPVGTPFWLMVIFVAFIGGFIYGPVGLIGLQALDLSPRNVAGTAAGFTGLFGYLLG FT ATLASTGVGFLVKFAGWNVTFIVFLVFTVLILVIFQVIWREEKKLMQERALKLEQGV" FT misc_feature complement(order(253014..253079,253095..253160, FT 253200..253265,253296..253361,253383..253448, FT 253494..253559,253695..253751,253782..253847, FT 253911..253961,253974..254039,254061..254126, FT 254172..254237)) FT /note="12 probable transmembrane helices predicted for FT DIP0285 by TMHMM2.0" FT misc_feature complement(253014..254255) FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT CDS complement(254456..255157) FT /transl_table=11 FT /locus_tag="DIP0286" FT /product="two-component regulatory protein" FT /note="Similar to Klebsiella pneumoniae phosphate regulon FT transcriptional regulatory protein PhoB SW:PHOB_KLEPN FT (P45605) (229 aa) fasta scores: E(): 1.7e-25, 40.708% id in FT 226 aa, to Shigella dysenteriae phosphate regulon FT transcriptional regulatory protein PhoB SW:PHOB_SHIDY FT (P45606) (229 aa) fasta scores: E(): 6.5e-25, 40.265% id in FT 226 aa, and to Escherichia coli phosphate regulon FT transcriptional regulatory protein PhoB or B0399 or Z0497 FT or ECS0449 SW:PHOB_ECOLI (P08402) (229 aa) fasta scores: FT E(): 6.5e-25, 40.265% id in 226 aa" FT /protein_id="CAE48790.1" FT /translation="MHRLRVLVVDDEPQMVQIISYALELEGWEVLSASSAQRGWQLLNE FT YRCDLVILDVMLPDASGYALCERIRAAGDVAGTPVIMLTALGDTDNRVEGLEAGADDYV FT AKPFSPKELVLRAQAVVRRSGGVVQPELREIIVGEVSVNPATHAVVIGGRRVDTTATEG FT KLLQALVSHPNEVVSVKRLLNEVWDTTATQGGRNMVKSTAYRLRKKLENAGLPADSILA FT VRGQGYVFQYE" FT misc_feature complement(254477..254698) FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal" FT misc_feature complement(254783..255148) FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature complement(254795..255145) FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature complement(254807..255148) FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT CDS complement(255150..255947) FT /transl_table=11 FT /locus_tag="DIP0287" FT /product="two-component sensor protein" FT /note="Similar to Escherichia coli sensor protein RcsC or FT B2218 SW:RCSC_ECOLI (P14376) (933 aa) fasta scores: E(): FT 5.5e-10, 26.339% id in 224 aa, and to Pseudomonas syringae FT sensor protein GacS or LemA SW:GACS_PSESY (P48027) (907 aa) FT fasta scores: E(): 2e-09, 27.530% id in 247 aa" FT /protein_id="CAE48791.1" FT /translation="MFAALVLTACGSACAASLVTAAVVRRRGCDQGSTITDEQILAHEI FT RTPLSLIKGAAELLGQESDPHKCERLVATIGANSTRAIEVAESFLLQAKLNSGSVKLQV FT SPCDVRGLVRSTAQELRAMSEVPIVVDDPGDPLVIDGDAQLLRHALWNVLNNAARYAGS FT DSDIVVGVEESATGVIVTVADYGPGMTSRQRRDMFVPFAQFGQAHAQGHTQTQSTAAVP FT SGAGLGMAITQKIVQLHRGSVLVDSIADHGTSVLITLPRTYYA" FT misc_feature complement(255159..255527) FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature complement(255159..255830) FT /note="ProfileScan hit to PS50109, Bacterial histidine FT kinase domain." FT misc_feature complement(255168..255209) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(255225..255281) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(255372..255416) FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature complement(255654..255848) FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain" FT /note="HMMSmart hit to SM00388, His Kinase A FT (phosphoacceptor) domain" FT misc_feature complement(255681..255728) FT /note="ScanRegExp hit to PS00012, Phosphopantetheine FT attachment site." FT misc_feature complement(255876..255941) FT /note="1 probable transmembrane helix predicted for DIP0287 FT by TMHMM2.0" FT misc_feature complement(255885..255947) FT /note="Signal peptide predicted for DIP0287 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.668 between residues 21 and 22" FT stem_loop complement(255997..256076) FT CDS complement(256103..256405) FT /transl_table=11 FT /locus_tag="DIP0288" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48792.1" FT /translation="MLYDSIASVLIIIAGLLFVVSATALWHAPDALTRANLLGPATSVA FT LPLIVIATLLHDIGAGSFEINHLVRAIVAIVALWVVLAVASFVMGRALHEVSQES" FT misc_feature complement(order(256136..256201,256238..256294, FT 256325..256390)) FT /note="3 probable transmembrane helices predicted for FT DIP0288 by TMHMM2.0" FT misc_feature complement(256340..256405) FT /note="Signal peptide predicted for DIP0288 by SignalP 2.0 FT HMM (Signal peptide probability 0.954) with cleavage site FT probability 0.552 between residues 22 and 23" FT CDS complement(256405..256671) FT /transl_table=11 FT /locus_tag="DIP0289" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48793.1" FT /translation="MLEISIYIGLALTAASLLSAIVLMLKTKDELTRAVISDMCFYGMI FT AFYLIWSLRNPTSIAYEVVLLAGLVGGALPTMSVARIISKGRR" FT misc_feature complement(order(256432..256497,256513..256578, FT 256594..256659)) FT /note="3 probable transmembrane helices predicted for FT DIP0289 by TMHMM2.0" FT CDS complement(256671..257048) FT /transl_table=11 FT /locus_tag="DIP0290" FT /product="Conserved hypothetical protein" FT /note="Similar to Vibrio cholerae hypothetical protein FT VCA0154 TR:Q9KN12 (EMBL:AE004356) (158 aa) fasta scores: FT E(): 0.0029, 30.588% id in 85 aa" FT /protein_id="CAE48794.1" FT /translation="MHAPLYVVWLIGQIFVATGVLIKDMFHGYKSMEPCVVYYPLRVTK FT EWQITALAASITITPGTMSIGLREDGTLLVHAVYGHNPADVLADIATMEEHLAPSVKDI FT PHKVANVRIEHPAHLAIRKEQ" FT misc_feature complement(256743..257027) FT /note="HMMPfam hit to PF01899, Protein of unknown function FT DUF68" FT misc_feature complement(256983..257033) FT /note="1 probable transmembrane helix predicted for DIP0290 FT by TMHMM2.0" FT CDS complement(257051..258574) FT /transl_table=11 FT /locus_tag="DIP0291" FT /product="Putative Na+/H+ antiporter subunit" FT /note="Similar to Staphylococcus aureus Na+/H+-antiporter FT subunit MnhD or SA0810 TR:Q9ZNG3 (EMBL:AB015981) (498 aa) FT fasta scores: E(): 2.4e-35, 29.482% id in 502 aa" FT /protein_id="CAE48795.1" FT /translation="MDFVLPLFVGLPLLTVALTVMAPWRVVRDGFAVVVPVLTGLAGAW FT LFAYTATHGTIAHSIGLYVGGVAIPFVADQFSAIMIVTTSIVAFASNWFAVAVGETRAR FT FYAPLSLMLLTGVMGALLTADLFNFFVFIEVMLLPSYGLMAMTGTWARLSAGRTFVLVN FT LATSTILVMAVSVLYGTVGAVNIAALAGAARGNGPVSVVMGIVVIALIVKAGVFPVHTW FT LPRSYPATSASVMGLFSGLHTKVAVYMLFRIYVVIFDLEQRWIWLITVICILSMLVGAF FT AGLAENSMRRVLAYQMVNGMPFILVMLAFTSGNEQAALAAGIFYALHHMITVGSLILSA FT GAIEETYGTDLLSKLTGIARRDPWVAAVFVVGAFSVVGFPPFSGLWGKVFIVVGVAHQA FT TWQAWLVIAVIVIASFGAFLSMLRLWREVFWGAVMNRERVPEAMRVPWHRLAPAAVLAV FT TSLAMFVFAGPLVGATRAAAGDLLDVPAYTQAVLGDNPIGLATDLQGGK" FT misc_feature complement(order(257174..257239,257300..257365, FT 257426..257482,257546..257611,257642..257698, FT 257720..257785,257801..257866,257906..257971, FT 258032..258097,258113..258178,258194..258259, FT 258281..258346,258407..258472,258494..258559)) FT /note="14 probable transmembrane helices predicted for FT DIP0291 by TMHMM2.0" FT misc_feature complement(257324..258208) FT /note="HMMPfam hit to PF00361, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT misc_feature complement(257387..257467) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT misc_feature complement(258026..258100) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT misc_feature complement(258131..258190) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT CDS complement(258574..258999) FT /transl_table=11 FT /locus_tag="DIP0292" FT /product="Putative Na+/H+ antiporter subunit" FT /note="Similar to Staphylococcus aureus Na+/H+-antiporter FT subunit MnhC or SA0811 TR:Q9ZNG4 (EMBL:AB015981) (113 aa) FT fasta scores: E(): 6.5e-08, 38.889% id in 90 aa" FT /protein_id="CAE48796.1" FT /translation="MILSLSIAVLAAAGTYMVLQRGMLRIVIGMTLISHAVNLIILNAG FT VPRWRGEAFPSLTDISESSDPVPQAFVLTAIVIAMATTTYMLTLSGLGRSDDTLAEEVA FT DETSPLQTLGRSTTNAEAVEDLEHAAKRAATRQEETH" FT misc_feature complement(258682..258999) FT /note="HMMPfam hit to PF01898, Protein of unknown function FT DUF67" FT misc_feature complement(258730..258960) FT /note="BlastProDom hit to PD006097, PD006097" FT misc_feature complement(order(258733..258798,258862..258927, FT 258943..258993)) FT /note="3 probable transmembrane helices predicted for FT DIP0292 by TMHMM2.0" FT CDS complement(259003..261915) FT /transl_table=11 FT /locus_tag="DIP0293" FT /product="Putative Na+/H+ antiporter subunit" FT /note="Similar to Pseudomonas aeruginosa probable NADH FT dehydrogenase PA1054 TR:Q9I4S0 (EMBL:AE004537) (933 aa) FT fasta scores: E(): 3e-85, 34.395% id in 942 aa, and to FT Rhizobium meliloti pH adaptation potassium efflux system FT transmembrane protein TR:CAC47489 (EMBL:AL591792) (999 aa) FT fasta scores: E(): 5.9e-61, 31.818% id in 968 aa, and to FT Staphylococcus aureus Na+/H+ antiporter subunit MnhA FT TR:Q9ZNG6 (EMBL:AB015981) (801 aa) fasta scores: E(): FT 6.5e-33, 31.750% id in 800 aa" FT /protein_id="CAE48797.1" FT /translation="MTLIIVLALAACAVALAPVTVRICDRKAGWPLAALFVVAAVLLCK FT ELPGIIAGTPLTLEYTWVPDFVGDGVDVSFALRADALSSFFALLALGIGSVVFAYSASY FT LHNNAGNTSFYTIMTAFMASILLLVFANDAVLLFIAWELVSLASFMLIARSGGKGGELG FT SQRTLILTFIGGLTLLVAMAIASNQAGSTNIDAIIHAGFWAEKPALTGVVAVLVAVSAF FT TKSAQFPFHFWLPEAMAAATPVSAFLHAAAVVKAGIYVLLRFSAVFSDVAVWNWLLIVV FT GMFTAVMASFFAIQKTDMKKLTAYSTVSHLGWIVATIGVGTPFALAAAVVHTLAHALFK FT SSLFMLVGVVDHQAGTRDLTRLGSSWRQLPFTFGAMAIAAASMAAVPPLFGFVSKEGML FT EAFLHAPIGNAGVVVLMVAAGVGALFTFTYSVRLVVDGFIDGSREMSDCKEAPVSLWLP FT AALPGVLSIPAALFVSRLDAPVSAAVSEVADDPHTHLAVWHGVTIPFVISMLVLVFGVL FT GLVKRQWIWDSLADRKLAPRSGNELLNLSVRGIAAFGRCVGSMADSLSPTRHLAYVFML FT LVVLGGTVTVKGVASGGIDGVPLAPRIDGADRWADALPLAIIVLAAALLLRTKRRLTAV FT IMIGVVGVGVTVQMLMLGSPDVALTQFMVEALTVVIMMMVIRQQPDNFHPSKGRRKAFA FT AVMAVAVGVVTFLMCWFVLGRRERPELAIWYLNNGPEITGGDNVVNTILVEFRAFDTMG FT ELSVLGMAAVVIAAVVTSMPRYPFAHGTHPAPFGLSHVNSIPLRQLLRVLIPILGILSF FT AIFMRGHNSPGGGFIAALVAGGALMLSYLSHARDQHIFTFKTPIYLTSIGIILALVSGF FT LGLTHGSFLYALHGHWAGEHWTTAMIFDLGVYLAVLGMLSMAINALGSYLRPGMDYDRL FT NFTRDESPLVSPAKVEAQADDDLDWPETKSSAQASQPKEA" FT misc_feature complement(order(259165..259230,259291..259347, FT 259387..259437,259468..259518,259582..259647, FT 259774..259839,259888..259944,259960..260016, FT 260038..260088,260134..260199,260365..260430, FT 260491..260556,260617..260682,260743..260808, FT 260923..260988,261034..261099,261139..261204, FT 261250..261315,261355..261411,261493..261558, FT 261598..261663,261760..261825,261847..261903)) FT /note="23 probable transmembrane helices predicted for FT DIP0293 by TMHMM2.0" FT misc_feature complement(260602..260661) FT /note="FPrintScan hit to PR01434, NADH-ubiquinone FT oxidoreductase chain 5 signature" FT misc_feature complement(260647..261525) FT /note="HMMPfam hit to PF00361, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT misc_feature complement(260707..260787) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT misc_feature complement(260884..260943) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT misc_feature complement(260950..260988) FT /note="FPrintScan hit to PR01434, NADH-ubiquinone FT oxidoreductase chain 5 signature" FT misc_feature complement(261112..261192) FT /note="FPrintScan hit to PR01434, NADH-ubiquinone FT oxidoreductase chain 5 signature" FT misc_feature complement(261127..261201) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT misc_feature complement(261193..261258) FT /note="FPrintScan hit to PR01434, NADH-ubiquinone FT oxidoreductase chain 5 signature" FT misc_feature complement(261343..261417) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT misc_feature complement(261448..261507) FT /note="FPrintScan hit to PR01437, NADH-ubiquinone FT oxidoreductase subunit 4 signature" FT misc_feature complement(261532..261594) FT /note="FPrintScan hit to PR01434, NADH-ubiquinone FT oxidoreductase chain 5 signature" FT misc_feature complement(261556..261705) FT /note="HMMPfam hit to PF00662, NADH-Ubiquinone FT oxidoreductase (complex I), chain 5 N-terminus" FT misc_feature complement(261601..261678) FT /note="FPrintScan hit to PR01434, NADH-ubiquinone FT oxidoreductase chain 5 signature" FT misc_feature complement(261853..261915) FT /note="Signal peptide predicted for DIP0293 by SignalP 2.0 FT HMM (Signal peptide probability 0.834) with cleavage site FT probability 0.531 between residues 21 and 22" FT CDS 262085..263482 FT /transl_table=11 FT /locus_tag="DIP0294" FT /product="Putative membrane protein" FT /note="Similar to Deinococcus radiodurans conserved FT hypothetical protein DR0075 TR:Q9RY75 (EMBL:AE001870) (1467 FT aa) fasta scores: E(): 3e-06, 27.568% id in 370 aa" FT /protein_id="CAE48798.1" FT /translation="MSRKIVRRALAGALFFVPLIAGTVYATTQDVDPAATWSAAQETQQ FT GAPAVQEDPSLVDIRRAAGEAGSQASLLKNGTTQLVDGTTALNNGAAQLGDGTKAAQNG FT AAQLADGMVKLQAATGQMGNGATEIANGIDQAVGQFQNVEVIRGQLLTAINLAMSDPKL FT ADVKPDLEDFKRQVETFKVDDNITSQMDKLRDGSRELANQLAVPGYSFHDGIYSATKGS FT KDLSAGLNDLSGGVDQALTGVRDLDNGAKKIDAMAKENQTRVGNIQRALPITKAGTPEA FT QEQGVTRTLAPLYAFLIAAGLMLAATAYLRDRIWGTIAFITLTLLGGGLVYLLGTEITA FT GVAAAAAGVSALAVAGAALLGTLLTSIFGERTGRGLSALVTIAQVAVVGFVWNSAANSA FT LSSAAKALVNFMPLHYPTLALSSIGNAGDTTTTALGVGVTAACAVCAAAGVMILRKKEE FT QTLPTAE" FT misc_feature order(262952..263011,263024..263092,263120..263188, FT 263207..263260,263375..263443) FT /note="5 probable transmembrane helices predicted for FT DIP0294 by TMHMM2.0" FT CDS complement(263559..264449) FT /transl_table=11 FT /locus_tag="DIP0295" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48799.1" FT /translation="MNVWGDKIRVIDTLRMSHTEYAQWITNQQHKHFNIHAELWADSEE FT WEALNPWTRDWARILAVGKRARTGVICGRSAVRLWRLGILGYEEPVVVVLPGTKTAPRN FT TKRWIHYRSARIPSNKITEHKGIRFTTMERSIGDLCRWGTFAEGLVAVESYLRQEDAQP FT FLLEQELEEFGRIPGVRKFRRVLQVADSKSESVAESWAKAQLIEAKITFEQQVQINNRR FT ADFLVGRVVIEIDGDIKFHDDESRAVLKERKRDRELQNAGYVVAHFDWESLNSGTFIPS FT LLRLLEFTNTKTQGR" FT stem_loop complement(264632..264673) FT /note="Score 56: 19/20 (95%) matches, 0 gaps" FT tRNA complement(264680..264753) FT /gene="tRNA-Pro" FT /product="transfer RNA-Pro" FT /anticodon=(pos:264717..264719,aa:Pro) FT /note="tRNA Pro anticodon CGG, Cove score 67.50" FT CDS complement(264827..265741) FT /transl_table=11 FT /locus_tag="DIP0296" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3785 TR:AAK48152 FT (EMBL:AE007176) (319 aa) fasta scores: E(): 1.6e-59, 54.08% FT id in 294 aa" FT /protein_id="CAE48800.1" FT /translation="MIWVRLLKTLLGLTAATAATGAATLAWGYRECSNFELKTIDLPIL FT EPGILRGNPHFSILHISDLHMVPTQTTKQRWVAQLDKLNPDLVVNTGDNLSDAKAVPAV FT MQALSPLLKRPGVFVFGTNDYFAPRMVNPFVYLLGKKRTPSRVELPWKGMRAAFIEHGW FT RDANQQRHEFKVDFLRLAITGVDDPHHDLDNYDDIAGAPNPDADLSIALTHSPEPRVLK FT KFEQDGYMLSLSGHTHGGQICLPGSRALVTNCGIDRPRVQGLHRFGSMWMHVSNGLGTS FT KFAPVRIFCKPSATLIRVTERTL" FT misc_feature complement(265013..265576) FT /note="ProfileScan hit to PS50185, Metallo-phosphoesterase FT motif." FT misc_feature complement(265676..265741) FT /note="Signal peptide predicted for DIP0296 by SignalP 2.0 FT HMM (Signal peptide probability 0.958) with cleavage site FT probability 0.347 between residues 22 and 23" FT CDS 265769..266233 FT /transl_table=11 FT /locus_tag="DIP0297" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3790 TR:AAK48157 FT (EMBL:AE007176) (154 aa) fasta scores: E(): 2e-23, 57.14% FT id in 154 aa" FT /protein_id="CAE48801.1" FT /translation="MSELKNKIRADLTTAMKAREKERTGTLRMLLAAIQTEETSGSKHE FT LTDEDVLKVIAREIKKRRESAEVYAEAGRSELADAETNEANILAEYQPQQLDDDELAAL FT VAEAVAQVKAELGEGVSMKQMGQVMKLATAQAAGRADGKRLSTAVRAALA" FT misc_feature 265787..266227 FT /note="HMMPfam hit to PF02637, GatB/Yqey domain" FT CDS complement(266238..268622) FT /transl_table=11 FT /locus_tag="DIP0298" FT /product="Putative penicillin-binding secreted protein" FT /note="Similar to Mycobacterium leprae Pbp1 Pon1 FT SWALL:P72351 (EMBL:S82044) (821 aa) fasta scores: E(): FT 4.9e-130, 48.08% id in 757 aa, and to Mycobacterium FT tuberculosis CDC1551 penicillin-binding protein 1 MT3784 FT TR:AAK48151 (EMBL:AE007176) (810 aa) fasta scores: E(): FT 4.8e-134, 48.75% id in 761 aa" FT /protein_id="CAE48802.1" FT /translation="MWNSLKDIVLATVAGGVVCALALTPVAAIAGVAVDRTNDTMQSNL FT QDLTDGSAPGVSTILDNRNNPIAWVYKQRRFEIPSEAIPQSMKDAIVSIEDRRFYEHKG FT VDIQGNLRAIVTNIFAGGVAQGASTIDQQYVKNFLLLVKSDNPEEQAAATETSIPRKLR FT EMRMASTIDSTLSKDDILTRYLNLVHLGNGAFGVEAAARTYFGKGAPELSLAQSAMFAG FT IVQSSSYLDPYTNPDAVMDRRNVVLDTMAANGYATPEDVAAAKAEPLGVLEQPQGLPNG FT CITAGDNGFFCDYVLKYLSEKGLSTDQLTQGSYTINTTLDPDVQQAAHAAAAGQVNSHT FT FGVANVMNIVEPGKDSRKILAMTSSRDYGLDLDAGQTVLPQPTSLVGNGAGSVFKIFTA FT AVALQQGYGLDTQLQVPPRYEAKGMGDGGAEGCGAGTYCVENSGSYAPQMSLRDALAFS FT PNTPFVQMIEKVGVKDVVDTSVKLGLRSYANPGTFNKDNSIADYVKEHNLGSYTLGPTA FT VNPLELSNVAASLASDGMWCEPSPITTVTDAKGNEVFLDRPACEQAIDPEIAQALSAGL FT SQDTIKGTGAQAAKSLGFSAPTAAKTGTTESHSSAAFLGFNSNFAAASYIYNDGTTVTP FT LCTSPVVQCGEGTLFGGDEPARTWFTAAQSSGLAASGNLPSYDPKFNRGVSGSFGTSYV FT GREGESVRKELSAKGYKVTMTSAPGDGIPKGSVVNVIAPVPLKPGGTIELFISDGTRPR FT TTPPSTTRRPNPTEEVVPGTGVSQNDLDDLAHQLQQLLPGF" FT misc_feature complement(266640..267659) FT /note="HMMPfam hit to PF00905, Penicillin binding protein FT transpeptidase domain" FT misc_feature complement(267912..268451) FT /note="BlastProDom hit to PD001895, PD001895" FT misc_feature complement(267912..268454) FT /note="HMMPfam hit to PF00912, Transglycosylase" FT misc_feature complement(268539..268622) FT /note="Signal peptide predicted for DIP0298 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.619 between residues 28 and 29" FT CDS 268821..269168 FT /transl_table=11 FT /locus_tag="DIP0299" FT /product="Putative regulatory protein" FT /note="Similar to Mycobacterium tuberculosis putative FT regulatory protein Rv681c or MTV025.029c TR:O69649 FT (EMBL:AL022121) (100 aa) fasta scores: E(): 4.9e-22, 65.06% FT id in 83 aa, and to Mycobacterium tuberculosis CDC1551 FT WhiB-related protein MT3783 TR:AAK48150 (EMBL:AE007176) FT (118 aa) fasta scores: E(): 5.6e-22, 65.06% id in 83 aa" FT /protein_id="CAE48803.1" FT /translation="MTASLMNTGKKNPFRDTQQGEYGNGDRNDWVMQASCRNGDPDALF FT VRGAEQRRAAAICRQCPVMIQCRADALDNKVEFGVWGGLTERQRRAILRKNPHVDSWEQ FT FFAQGGELLGM" FT misc_feature 268908..269096 FT /note="HMMPfam hit to PF02467, Transcription factor WhiB" FT CDS 269209..269364 FT /transl_table=11 FT /locus_tag="DIP0300" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 6.1 FT kDa protein SCH17.10c TR:Q9XA37 (EMBL:AL079353) (53 aa) FT fasta scores: E(): 5.4e-16, 85.71% id in 49 aa, and to FT Mycobacterium tuberculosis CDC1551 conserved hypothetical FT protein MT3780 TR:AAK48147 (EMBL:AE007175) (53 aa) fasta FT scores: E(): 5.9e-14, 77.08% id in 48 aa" FT /protein_id="CAE48804.1" FT /translation="MTKWEYSTVPLLTHATKQILDTWGEDGWELVSVVPGPNPENVVAY FT MKRPVE" FT CDS 269366..269830 FT /transl_table=11 FT /locus_tag="DIP0301" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3779 TR:AAK48146 FT (EMBL:AE007175) (151 aa) fasta scores: E(): 1.3e-30, 63.75% FT id in 149 aa, and to Streptomyces coelicolor hypothetical FT 15.7 kDa protein SCH17.09c TR:Q9XA38 (EMBL:AL079353) (155 FT aa) fasta scores: E(): 2.5e-29, 62.25% id in 151 aa" FT /protein_id="CAE48805.1" FT /translation="MGASISEKLAELNIMLPSVAAPVAAYVPAVKVGNQVWTSGQLPFI FT DGQLPATGKVGATVTAEQAASYARTAALNALAAVDALVGIDNVTRILKVTGFVASATDF FT GGQPAVVNGASNLIGEIFGEAGAHARSAVGVAELPLDAPVELEIIVEVAN" FT misc_feature 269417..269821 FT /note="HMMPfam hit to PF01042, YjgF family" FT CDS 269881..270705 FT /transl_table=11 FT /locus_tag="DIP0302" FT /product="Putative hydrolase" FT /note="Similar to Mycobacterium tuberculosis putative FT hydrolase Rv3677c or MTV025.025c TR:O69645 (EMBL:AL022121) FT (264 aa) fasta scores: E(): 1.1e-18, 40.89% id in 269 aa" FT /protein_id="CAE48806.1" FT /translation="MLKAMEHPAYSQLRPVTPSAGVVLCPNPGYSSLEGTNSWVVRAEG FT DRCSIVIDPGPADEGHLNVLHGKAETVGLVLLTHRHHDHADGAERFRQLTGAAIRAQQA FT PYCHGGDVLRDGEIIAIDGVTPQLEVVFTPGHTSDSVCFFVWSGVPHESNLEGIITGDT FT IAGRHTTMISETDGDLGQYLNTLALLEKRGKGIALLPGHGPDGDDVASFAHWYIERRMQ FT RLEQIKEAIAQRGADVPIKELIDAVYDDVDPVLRGAAEQSTRVALRYLAQQQ" FT misc_feature 269971..270486 FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily" FT CDS complement(270766..271449) FT /transl_table=11 FT /locus_tag="DIP0303" FT /product="Putative transcription regulator" FT /note="Similar to Corynebacterium glutamicum probable FT transcription regulator TR:AAK58838 (EMBL:AF293334) (227 FT aa) fasta scores: E(): 8e-79, 91.18% id in 227 aa, and to FT Escherichia coli catabolite gene activator Crp or Cap or FT Csm or B3357 or Z4718 or ECS4208 SW:CRP_ECOLI (P03020) (210 FT aa) fasta scores: E(): 4.6e-15, 33.68% id in 190 aa" FT /protein_id="CAE48807.1" FT /translation="MEGVQDILSRAGIFQGVDPIAVNNLIEDLESVRFPRGATIFEEGE FT PGDRLYIITSGKVKLARHSMDGRENLLTVMGPSDMFGELSIFDPGPRTSSAVCVTEVHA FT ATMNSEMLRQWIAEHPEISEQLLRVLARRLRRTNNSLADLIFTDVPGRVAKTLLQLANR FT FGTQEGGALRVNHDLTQEEIAQLVGASRETVNKALATFAHRNWIRLEGKSVLIVDTEHL FT AKRAR" FT misc_feature complement(270796..270942) FT /note="HMMSmart hit to SM00419, helix_turn_helix, cAMP FT Regulatory protein, DNA-binding" FT misc_feature complement(270829..270921) FT /note="HMMPfam hit to PF00325, Bacterial regulatory FT proteins, crp family" FT misc_feature complement(270853..270918) FT /note="Predicted helix-turn-helix motif with score 1990 FT (+5.96 SD) at aa 178-199, sequence LTQEEIAQLVGASRETVNKALA" FT misc_feature complement(271048..271413) FT /note="HMMSmart hit to SM00100, Cyclic FT nucleotide-monophosphate binding domain" FT misc_feature complement(271051..271413) FT /note="ProfileScan hit to PS50042, cAMP/cGMP binding FT motif." FT misc_feature complement(271087..271368) FT /note="HMMPfam hit to PF00027, Cyclic nucleotide-binding FT domain" FT misc_feature complement(271144..271179) FT /note="FPrintScan hit to PR00103, cAMP-dependent protein FT kinase signature" FT misc_feature complement(271186..271215) FT /note="FPrintScan hit to PR00103, cAMP-dependent protein FT kinase signature" FT misc_feature complement(271261..271305) FT /note="FPrintScan hit to PR00103, cAMP-dependent protein FT kinase signature" FT misc_feature complement(271306..271350) FT /note="FPrintScan hit to PR00103, cAMP-dependent protein FT kinase signature" FT CDS 271954..272709 FT /transl_table=11 FT /gene="nth" FT /locus_tag="DIP0304" FT /product="endonuclease III" FT /EC_number="4.2.99.18" FT /note="Similar to Mycobacterium tuberculosis endonuclease FT III Nth or Rv3674c or MT3775 or MTV025.022c SW:END3_MYCTU FT (O69642) (245 aa) fasta scores: E(): 2.2e-59, 62.04% id in FT 245 aa, and to Bacillus subtilis probable endonuclease III FT Nth or JooB SW:END3_BACSU (P39788) (219 aa) fasta scores: FT E(): 1.4e-28, 41.96% id in 193 aa" FT /protein_id="CAE48808.1" FT /translation="MSRPDLAQQPTALAVKRRARAINRELAKAYPDAHCELDFNNPLEL FT TVATVLSAQCTDVRVNQITPALFAKYPTAEAYASANEAELQEMIRPTGFYKAKAAHLIG FT MGQKLVTDFSGEIPRDLESLVSLPGVGRKTAHVVRGNAFDIPGLTVDTHFGRLVRRLGL FT TTQTNPVKVEHEIADLIEKKEWTMFSHRIIFHGRRVCHSRTAACGACFLAPRCPSYGEA FT GPTDPLRAETLVTGDNREHLLQMAGIGNA" FT misc_feature 272080..272544 FT /note="HMMPfam hit to PF00730, HhH-GPD superfamily base FT excision DNA repair protein" FT misc_feature 272104..272547 FT /note="HMMSmart hit to SM00478, endonuclease III" FT misc_feature 272548..272610 FT /note="HMMSmart hit to SM00525, No definition" FT CDS 272702..273262 FT /transl_table=11 FT /locus_tag="DIP0305" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT thioredoxin-related protein MT3774 TR:AAK48141 FT (EMBL:AE007175) (227 aa) fasta scores: E(): 7.6e-13, 32.84% FT id in 204 aa" FT /protein_id="CAE48809.1" FT /translation="MRKTIVVSALVFVAVFAALISMIVGNNNEPTPENLQEETQNVASR FT PDCEVSTVAGVQLDCLGGNAHMSDGNPKITVVNVWAWWCEPCRAELPLFDTLAQRHPEL FT RVIGVHADTNAANGAALLNDLGVSLPSLQDNHNAFAGTLGLPNVVPITVIMNADGSKEA FT VMPRAFSTYEELETAVMAKVHKG" FT misc_feature 272702..272782 FT /note="Signal peptide predicted for DIP0305 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.174 between residues 27 and 28" FT misc_feature 272846..273244 FT /note="ProfileScan hit to PS50223, Thioredoxin-domain (does FT not find all)." FT misc_feature 272927..272983 FT /note="ScanRegExp hit to PS00194, Thioredoxin family active FT site." FT CDS 273265..274002 FT /transl_table=11 FT /locus_tag="DIP0306" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 26.5 FT kDa protein SCH17.02c TR:Q9XA45 (EMBL:AL079353) (247 aa) FT fasta scores: E(): 1.9e-26, 40.08% id in 227 aa" FT /protein_id="CAE48810.1" FT /translation="MDFPQPDAPGHNIDLRPEFAPRWLSPLVSDVANGVICDRLRRVLA FT PPQRTETTKQAAVLMLLAGDPLAHTVPNDATVLLTHRSPTMRSHSGQIAFPGGRMDPTD FT HNVVDCALREAWEETGVDRMNVTPLVTFPMLHIRATGYPVHPVLGYWHRPSRVGVVSPN FT EADAVAAIPIAELADPSNRLTVEFDRWSGPAFRINDFIIWGFTGGLLDAMLYQAGWEQP FT WDSHKHYDLYDTLARSRNNERLT" FT misc_feature 273421..273846 FT /note="HMMPfam hit to PF00293, MutT-like domain" FT misc_feature 273496..273558 FT /note="ScanRegExp hit to PS01293, Uncharacterized protein FT family UPF0035 signature." FT CDS 274025..275221 FT /transl_table=11 FT /locus_tag="DIP0307" FT /product="Putative serine protease (mycosin)" FT /note="Similar to Mycobacterium tuberculosis CDC1551 serine FT protease MT3772 TR:AAK48139 (EMBL:AE007175) (397 aa) fasta FT scores: E(): 1.5e-47, 38.19% id in 398 aa" FT /protein_id="CAE48811.1" FT /translation="MTPGMTVDAAIVIALVIAIFTGWRQGAVSSVLSTLGVVAGLICGA FT AAAPFVMGLTEHVALRFLLALGTVILLVGVGNLVGGILGAQLRDHFLWKKTMWIDSAIG FT SVFQTLATLLVAWLVSIPLATGLSGGISQGIKNSEILGFVDHGAPSQLSALPSKISAML FT NESGLPPLVSPFMEKQHSSQVEAPAIKVADTALVERLRPSVIHVLGESEECSRRLMGSG FT FVVDATHVMTNAHVVAGTQRVSLDTVVGMVDATVVYYNPQLDIAVLEAEGLNLPALQWA FT PEPAETGADAIVMGFPESGPFEAAPARISDRIIIAGPDIYANGRVERESYTARGSIRQG FT NSGGPMVDAEGNVIGVVFGASVDATDIGYALTAKEVLNMVGDTSALHTPVATQQCVVN" FT misc_feature order(274034..274093,274112..274180,274208..274276, FT 274313..274381) FT /note="4 probable transmembrane helices predicted for FT DIP0307 by TMHMM2.0" FT misc_feature 274682..274735 FT /note="FPrintScan hit to PR00839, V8 serine protease family FT signature" FT misc_feature 274706..274744 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 274766..274828 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 275003..275056 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 275015..275065 FT /note="FPrintScan hit to PR00839, V8 serine protease family FT signature" FT misc_feature 275066..275104 FT /note="FPrintScan hit to PR00839, V8 serine protease family FT signature" FT misc_feature 275207..275218 FT /note="ScanRegExp hit to PS00294, Prenyl group binding site FT (CAAX box)." FT CDS complement(275218..276156) FT /transl_table=11 FT /locus_tag="DIP0308" FT /product="Putative hydrolase" FT /note="Similar to Streptomyces coelicolor putative FT hydrolase SCH5.29 TR:Q9X931 (EMBL:AL035636) (324 aa) fasta FT scores: E(): 5.8e-17, 31.21% id in 330 aa" FT /protein_id="CAE48812.1" FT /translation="MAAFFRRSNHSPKVPPVPISPHVVELEGPFSHIMLHTRGVRLHAA FT TAGDPTNPLIVLLHDSFGGWFDFKECLAPLAAAGFHVAAIDFRGYGLSDKPPTGYDHYL FT ATGDIAGSIRTLGHESAHVIACSSGAAIAWLLAANYPRHVASLTTMGAIHPLDMRRAII FT GRPWLFTYPVSMTTMFRLPRVLSKRLWRLKDMWVERDLRRWTSLSFQASPKFADTLALR FT RLAMSIDSTFPAVAKTSRYVVNVPPLKWASQHVTAPTHVLVDATPYARYLARRAASRCT FT GDFDTFSIPSTRMRPHLEDPAAFVAQVLKLL" FT misc_feature complement(275221..275919) FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold" FT misc_feature complement(275707..275748) FT /note="FPrintScan hit to PR00111, Alpha/beta hydrolase fold FT signature" FT /note="FPrintScan hit to PR00412, Epoxide hydrolase FT signature" FT misc_feature complement(275731..276000) FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT misc_feature complement(275749..275790) FT /note="FPrintScan hit to PR00111, Alpha/beta hydrolase fold FT signature" FT /note="FPrintScan hit to PR00412, Epoxide hydrolase FT signature" FT misc_feature complement(275875..275922) FT /note="FPrintScan hit to PR00111, Alpha/beta hydrolase fold FT signature" FT /note="FPrintScan hit to PR00412, Epoxide hydrolase FT signature" FT misc_feature complement(275926..275982) FT /note="FPrintScan hit to PR00412, Epoxide hydrolase FT signature" FT CDS complement(276244..276765) FT /transl_table=11 FT /locus_tag="DIP0309" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 18.9 kDa protein Rv3669 or MTV025.017 TR:O69637 FT (EMBL:AL022121) (172 aa) fasta scores: E(): 1.8e-20, 51.85% FT id in 135 aa" FT /protein_id="CAE48813.1" FT /translation="MIWRDRPVSNDKGFFTEGNDAFEAKVNAIPLTDVDATNKGSIGSL FT VSDATAQMSSLFRAEVELAKTELAVEAKKGVIGGGMFGVAGTIALYSSFFFFFFLAELL FT NLWIDRWAAFLIVFLFMLVLAGVLALVGFKKVKKISKPKETINSVNELKKLVPGKAQAK FT LEASNRGLYS" FT misc_feature complement(order(276367..276432,276463..276528)) FT /note="2 probable transmembrane helices predicted for FT DIP0309 by TMHMM2.0" FT CDS 276872..277525 FT /transl_table=11 FT /locus_tag="DIP0310" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 26.4 kDa protein Rv3662c or MTV025.010c TR:O69630 FT (EMBL:AL022121) (256 aa) fasta scores: E(): 3.1e-07, 31.44% FT id in 229 aa" FT /protein_id="CAE48814.1" FT /translation="MNGLLDREDIRTLLAEAESTIAAVHRRPVSLRRSDLTSAEGVLRG FT ARSSAQLTPQISEQHHISAYSVLAPDHIARSSTTFVRAPLQLLARIDVLSGGTGRPEQG FT SAALQSLAGFISARPHSGLGPAVVHGEILAHAPFGPRSAIVARVASRVLAYGLGFDPRG FT LCVPEPYLRRHHEDYHRCADHWADSADAAADFVALHLRAWIAGAAEAESIAAAV" FT CDS complement(277463..278368) FT /transl_table=11 FT /locus_tag="DIP0311" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 30.7 kDa protein Rv3661 or MT3761 or MTV025.009 FT SW:Y0G1_MYCTU (O69629) (287 aa) fasta scores: E(): 2.2e-40, FT 45.22% id in 272 aa, and to Streptomyces coelicolor FT putative morphological differentiation-associated protein FT SCH5.21 TR:Q9X923 (EMBL:AL035636) (268 aa) fasta scores: FT E(): 5e-38, 45.8% id in 262 aa" FT /protein_id="CAE48815.1" FT /translation="MATNTGHSNPKEALTFMNAPQLDIHQPRIAAFFDLDKTIIATSSA FT LAYGREFMHSGLITPAEALQMSMAKATYMFSGYSSEQMDHTKNQLAHLITGWSEEQVRE FT IANDTLQSVVAPAIYAEARDLIHMHQETGHDVVIISASARILVEAIAAELGVDQVVATE FT LTVVDGKFTGEVPFYCKGAAKAQAILDLTDKRGYQLDRSFAYSDSITDLPMLEAVGNPR FT AVNPDRALKKVALDRDWEIHTFKNPVALFSKPTKRDLQISTGVAAGVAAVVGSVMWWKS FT LNGRSDRLRLSCTRDPGTQM" FT misc_feature complement(277685..278287) FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT CDS 278791..279828 FT /transl_table=11 FT /locus_tag="DIP0312" FT /product="Putative morphological differentiation-related FT protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 35.8 kDa protein Rv3660c or MT3760 or MTV25.008c TR:O69628 FT (EMBL:AL022121) (350 aa) fasta scores: E(): 9.7e-19, 30.29% FT id in 340 aa, and to Streptomyces cyaneus (Streptomyces FT curacoi) inhibition of morphological differentiation FT TR:O33612 (EMBL:AB004855) (370 aa) fasta scores: E(): FT 1.6e-13, 33.08% id in 266 aa" FT /protein_id="CAE48816.1" FT /translation="MNTPHPSAPVLVAVANPTIHPEALHIVAATGRECIDTTDPREISR FT HAHRVAAMLVDATTAPHMASLPPNTRVMYLEPEPGPIDYEKAMKSGAELAVIVPAQSPE FT LLKALGRRDVAPRAGKYPVIAVIGAAGGAGTSTLCAALAADYREALLIDTEHFSGGIDL FT LLGKEDDPGIRWDDVPDSGEKVPASELLASLPCVDPNVRILAATRDSVTHVAEQQLRGV FT VESVRGTCPIIIDVQRHHVLFESCVDLADLVVLLVPAEIRSVAAAAQLVPWLRRRKVDV FT VGVLRERAWASVDREEVARVTGADIVATVPTVKGLPREVELGGMATIPRALRRPLAQLR FT SHIDG" FT misc_feature 279748..279771 FT /note="ScanRegExp hit to PS00687, Aldehyde dehydrogenases FT glutamic acid active site." FT CDS 279821..280918 FT /transl_table=11 FT /locus_tag="DIP0313" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 36.7 kDa protein Rv3659c or MTV025.007c TR:O69627 FT (EMBL:AL022121) (352 aa) fasta scores: E(): 6.7e-51, 52.21% FT id in 316 aa" FT /protein_id="CAE48817.1" FT /translation="MGDQRQRIAEEVQRYVAEHPDVAAGTSLAQVVRRYAGGVIGDVEV FT LEILRQIRHDSVGVGPLEHILAIPGVTDIVVNGVHGVWFDRGRGLEQAAPCFDDEGEVM FT RLATRLLVASGNRLDSAQCYSDGRITRDDGSSLRVHAVLSPPSESGPLISIRVLRQADV FT SMTDLIAHNTFTAEVAQILENLVRERRPLLIVGGTGSGKTTLLSALLATVAHDQRIICI FT EDTPELQPVHPHVVKLISRSSNTEGRGHITMTDLLRQALRMRPDRIVVGEIRGAEVVDL FT LAALNTGHDGCAGTLHANSLREVPARLEALAAVGGLDRNALHSQLAAARPVVIVVRSTP FT QGRRLHQIGELSGTPITPHVIWEEA" FT misc_feature 280391..280450 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 280394..280720 FT /note="HMMPfam hit to PF00437, Bacterial type II secretion FT system protein" FT misc_feature 280406..280429 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 280445..280495 FT /note="ScanRegExp hit to PS00778, Histidine acid FT phosphatases active site signature." FT CDS 280915..281661 FT /transl_table=11 FT /locus_tag="DIP0314" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis putative FT transmembrane protein Rv3658c or MTV025.006c TR:O69626 FT (EMBL:AL022121) (266 aa) fasta scores: E(): 6.1e-17, 36.52% FT id in 230 aa" FT /protein_id="CAE48818.1" FT /translation="MSMSFFLCALACVVPSVRWKPIVCNKIVSLAALVLLPIMLVIWEP FT VMIAAVLITATVIRTVMGIRRNRADRTTQEALSSALGIIAGDLRCGLGTWDALARVAQE FT PTTHAPLAAACAAAARRARAGGSAADVLADYSHSIAGLQRVARVWKLSETHGISVAPLV FT EQLHNEIDDRLRHRDRTKAALQGAQATAIVLSLLPLFGLGMGIGLGAPVLAFLLNNAIG FT QTLLIVGTALQCAGLLWSQALIKAVG" FT misc_feature order(280975..281043,281053..281106,281479..281547, FT 281575..281643) FT /note="4 probable transmembrane helices predicted for FT DIP0314 by TMHMM2.0" FT CDS 281661..282239 FT /transl_table=11 FT /locus_tag="DIP0315" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 19.1 kDa protein Rv3657c or MTV025.005c TR:O69625 FT (EMBL:AL022121) (191 aa) fasta scores: E(): 2.9e-10, 36.66% FT id in 150 aa" FT /protein_id="CAE48819.1" FT /translation="MLSLSAFILATAIFLTNPPPRMSADTKLALPSWLSALMAYNQRLR FT TRCDYHAAAEQLDIFVATSRAGLSLAQACAAVAATTSSAVDAEPWRQVAAMASLGVPMS FT RACTPLANTEGLVAVVAVMRAADASGASIAAGCERIARSLRDHAVDTYTAQAERTGVLI FT ALPLTLCFLPAFFLLGLAPVAISLGMDIL" FT misc_feature 281661..281729 FT /note="Signal peptide predicted for DIP0315 by SignalP 2.0 FT HMM (Signal peptide probability 0.964) with cleavage site FT probability 0.790 between residues 23 and 24" FT misc_feature 281814..282065 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 282141..282209 FT /note="1 probable transmembrane helix predicted for DIP0315 FT by TMHMM2.0" FT CDS 282263..282460 FT /transl_table=11 FT /locus_tag="DIP0316" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 7.1 kDa protein Rv3656c or MTV025.004c TR:O69624 FT (EMBL:AL022121) (68 aa) fasta scores: E(): 2.6e-05, 43.33% FT id in 60 aa" FT /protein_id="CAE48821.1" FT /translation="MLTTIVNRFRLLASDDSGMTTIEYALGAVAATALAGALYLVASSG FT AVADALEGIITNALNNAPGK" FT misc_feature 282323..282391 FT /note="1 probable transmembrane helix predicted for DIP0316 FT by TMHMM2.0" FT CDS 282457..282732 FT /transl_table=11 FT /locus_tag="DIP0317" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 13.0 kDa protein Rv3655c or MTV025.003c TR:O69623 FT (EMBL:AL022121) (125 aa) fasta scores: E(): 1.4, 31.81% id FT in 66 aa" FT /protein_id="CAE48822.1" FT /translation="MTTLEAAIAGASVIVLTALMGAGIVTIAAQISAIDQANAAARAHA FT IGVAYTPSRGHIDIDNTGGIVTVHAHVGSPLGIRSAEASFPKEMMP" FT misc_feature 282457..282591 FT /note="Signal peptide predicted for DIP0317 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.255 between residues 45 and 46" FT CDS 282729..283055 FT /transl_table=11 FT /locus_tag="DIP0318" FT /product="Putative secreted protein" FT /note="Similar to the central region of Streptomyces FT coelicolor membrane spanning protein SCH5.14c TR:Q9X916 FT (EMBL:AL035636) (230 aa) fasta scores: E(): 2.6e-05, 35.23% FT id in 105 aa" FT /protein_id="CAE48823.1" FT /translation="MNLLDNDHGNATVVGAGAALFLSAMFFAIVALATRTVDTHQAQLA FT ADMTAVAAAWSYAQGHDACAQARVVATAHHAELAECTIDGEDVELTTSVREQRATARAG FT PLRE" FT misc_feature 282729..282827 FT /note="Signal peptide predicted for DIP0318 by SignalP 2.0 FT HMM (Signal peptide probability 0.894) with cleavage site FT probability 0.523 between residues 33 and 34" FT misc_feature 282774..282965 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT CDS complement(283045..285381) FT /transl_table=11 FT /locus_tag="DIP0319" FT /product="Putative ATP-dependent RNA helicase, DeaD/DeaH FT box family" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT ATP-dependent RNA helicase, DeaD/DeaH box family MT3751 FT TR:AAK48112 (EMBL:AE007173) (771 aa) fasta scores: E(): FT 1.3e-152, 54.73% id in 760 aa, and to Bacillus subtilis FT putative helicase YprA SW:YPRA_BACSU (P50830) (749 aa) FT fasta scores: E(): 4.7e-67, 34.86% id in 763 aa" FT /protein_id="CAE48824.1" FT /translation="MSSSSPFMGYQLGEELAESVAQRYPNSTCTHIENIPPRSAHYLPW FT PAWTAPELQRELERRGIAQLYSHQAQAADLAWTGTNVVVATGTSSGKSLSYLLPILSAM FT SQDPQACALYLTPTKALGSDQLAHVMSLVGNVDTLTGVHPAPYDGDTPTDARAGIREQS FT RFVFSNPDMLHTGILPNHQRWARFFRHLRFIVIDECHSYRGVFGAGVALVIRRLLRLAA FT RYGSTPTVMLASATSNDPAAHASTLIGQPVVAVTEDGAPTGARTVMLWEPGFVDGAEGE FT NGAPIRRAASTESAGIMATLIAAGARTLTFVRSRRQAEVVALRCAEELACHGRHDFASR FT VAAYRAGYLAEDRRALERKLDDGTLLGVASTNALELGIDVGGLDAVVTAGYPGTVASFW FT QQAGRAGRRGQGSLVTLVARDDPMDTYLVHHPEALLGRPMEKIVFDPHNPHILSGHLYC FT AAAESPLTEAEIDALNAREVAQQLAHDGYLRHRPTGWFAVEQPGQPPAHSLVSLRGSGH FT HVAIVDRSDGRLLGTIDSARAASQVHPGAVYLHQGETFVIEELDDQVALAVPDQPDYQT FT FARSTTDIRIVGEVDKVCNPAPGLWVSNLVVEVTDRVVGYTMKASDGSVLAMVPLQMPP FT QTLVTRAVAYTVDPLVLDSLGITDVPGALHAAEHAAIGLLPLIATCDRWDIGGVSTAEH FT PDTGLPTVFVYDGHPGGAGFADCGYERFPEWVATTFEAIRSCQCESGCPSCVQSPKCGN FT GNDPLSKEGAIALLGAMCTMLGVTP" FT misc_feature complement(284134..285048) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(284155..284403) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(284578..285201) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(284614..285219) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT CDS 285652..285855 FT /transl_table=11 FT /gene="cspA" FT /locus_tag="DIP0320" FT /product="cold-shock protein" FT /note="Similar to Mycobacterium smegmatis cold-shock FT protein CspA TR:Q9KGW0 (EMBL:AF281675) (67 aa) fasta FT scores: E(): 5.8e-23, 86.56% id in 67 aa" FT /protein_id="CAE48825.1" FT /translation="MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGNGFRTLEEN FT QKVEFEVGEGAKGPQAQQVRAI" FT misc_feature 285652..285852 FT /note="HMMPfam hit to PF00313, 'Cold-shock' DNA-binding FT domain" FT misc_feature 285658..285852 FT /note="HMMSmart hit to SM00357, Cold shock protein domain" FT misc_feature 285661..285708 FT /note="FPrintScan hit to PR00050, Cold shock protein FT signature" FT misc_feature 285694..285753 FT /note="ScanRegExp hit to PS00352, 'Cold-shock' domain FT signature." FT misc_feature 285694..285843 FT /note="BlastProDom hit to PD000621, PD000621" FT misc_feature 285724..285753 FT /note="FPrintScan hit to PR00050, Cold shock protein FT signature" FT misc_feature 285769..285825 FT /note="FPrintScan hit to PR00050, Cold shock protein FT signature" FT CDS 286029..286646 FT /transl_table=11 FT /locus_tag="DIP0321" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor ABC transporter FT ATP-binding protein SC4A2.02c TR:O86658 (EMBL:AL031182) FT (229 aa) fasta scores: E(): 6.7e-12, 39.3% id in 201 aa" FT /protein_id="CAE48826.1" FT /translation="MEAPIVSMRDVTIETDGGVRLVHVDELDIFRGDTIAITGRSGSGK FT TMLLRALCGAHTAGITVRGSIQRAQRAALIMQDSLGSLNPLVRCEKQVRLMAGDPHAAR FT QALADCGITPELARRYPLELSGGQRQRVAIAGAIASNPKLLLADEPTSALDPVATLAVV FT DALRAFQSATGGAVAISTHSMGVARRLGSRRFHVAEGKVTQL" FT misc_feature 286119..286628 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 286122..286628 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 286128..286190 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 286143..286166 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 286398..286442 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 286398..286598 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 286643..287350 FT /transl_table=11 FT /locus_tag="DIP0322" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Escherichia coli hypothetical ABC FT transporter ATP-binding protein YddO or B1483 SW:YDDO_ECOLI FT (P77622) (308 aa) fasta scores: E(): 1.7e-15, 36.36% id in FT 209 aa" FT /protein_id="CAE48827.1" FT /translation="MSTSALIEFHGASVAGRVTNLSFSVHTGDKLGVIGPSGAGKTTLI FT SLITGMLTPDSGSVDIHANVVGYIPQDPGSSLCPRMTVAECIIEPQVIRLRGHADKARE FT LQRLQESIPVILTALGLDPEIARRKPRQLSGGQRQRVAIARALLGEPELVIADEAFSAL FT DQDTARLLQDLLLGSSSTVIFVSHNVTALRATCDDLLIMIDGTVRYHGPADNVDTTDPE FT VAAFLAAAKELAQ" FT misc_feature 286721..287284 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 286724..287257 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 286730..286807 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 286745..286768 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 287039..287083 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 287039..287245 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 287347..288594 FT /transl_table=11 FT /locus_tag="DIP0323" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Streptomyces coelicolor putative FT transport system permease protein sc4g2.20 TR:O86692 FT (EMBL:AL031371) (436 aa) fasta scores: E(): 4.5e-47, 42.61% FT id in 406 aa" FT /protein_id="CAE48828.1" FT /translation="MTRAKLPVHITFLLVTQMLFSIGFYLVVPFLAVQLSENLGASGTI FT VGLVLGIRTFSQQGLFFFGGGLADKFGAGPILLIGVAIRVIGFLTVGMAETVTLMTLGV FT VLIGFAAALFSPAVESIFAAEGHRLEKLGVITRARLFALDAAYSRIGTLTGPVIGAVLI FT PLGFATVSIAGAAIFGSIFVIHLALRRTWTASAQPQRTHAPSMMAVWGEVIRNKKFVVF FT ALLYSTYLLAYNQQYLSLPVELRRATGSDEALGWFFAVSAVFVIALQSRVTRWAERQAA FT AAALGGGFGLMALSFAVVAVASISLELEGWIAYVPAAAMMILLHTGIMIAVPIARDLVG FT DLAGNNNLGSYYGFLNSFGGLAVLLGSLTVGATLDHAETTQPMAAIPWLIMVAVLAVSA FT VGLAQLKEKQKVDITQ" FT misc_feature 287347..287469 FT /note="Signal peptide predicted for DIP0323 by SignalP 2.0 FT HMM (Signal peptide probability 0.788) with cleavage site FT probability 0.567 between residues 41 and 42" FT misc_feature order(287461..287514,287557..287625,287650..287718, FT 287830..287898,288001..288060,288103..288162, FT 288196..288264,288274..288342,288400..288468, FT 288496..288555) FT /note="10 probable transmembrane helices predicted for FT DIP0323 by TMHMM2.0" FT CDS 288591..290078 FT /transl_table=11 FT /locus_tag="DIP0324" FT /product="Putative secreted protein" FT /note="Similar to Streptomyces coelicolor putative FT solute-binding lipoprotein SC4G2.18 TR:O86690 FT (EMBL:AL031371) (503 aa) fasta scores: E(): 1.3e-64, 39.63% FT id in 497 aa" FT /protein_id="CAE48830.1" FT /translation="MKKKLGLAVATLAVATTLSGCFTDAGQANDDALRVALQFKPVADF FT SPYSDDAVLNLRMGAVETLVTLDEDGKPKPVLAEKWEMKDDRTAVLTLRKDVSFHDGSK FT LTGEVVKNALDHALSATTRPKGLGKADLKVEATGESEVTITAPEADPILVQRLTDPGAA FT ILSKDAYAGENPDPFNHGTGPFKLVKKESDGSVSAEAFADYWNGTPETSALKVSFIEDG FT AARANAFRAGDFDVIKGVPVVALPELSDAHVTDVHLPRATLLHLNAEKGVFADAKLRTA FT VAGAIKTDAIVDKIYEGKANKTEGSLFNLDAQWAQKAKPLAGAPADATIGKGKTVRLAT FT WDSRAELPETANLIADQLRALGFNVDITVADYASLENRLLDGSFDAVIGSRSYMIGAGD FT PVAFLDTDFTCDGSYNLSRLCDPEIDKKIAAAKSEKDLDTRHKDAAAIGADVVATGSVV FT PLAHEQLLVVSKDVEGIAADPMERSLITEKTKKTAKK" FT misc_feature 288591..288674 FT /note="Signal peptide predicted for DIP0324 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.974 between residues 28 and 29" FT misc_feature 288780..289484 FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5" FT misc_feature 288822..288887 FT /note="ScanRegExp hit to PS01040, Bacterial extracellular FT solute-binding proteins, family 5 signature." FT misc_feature 289572..289595 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 289638..290063 FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5" FT CDS 290085..291839 FT /transl_table=11 FT /locus_tag="DIP0325" FT /product="Putative transport system membrane protein" FT /note="Similar to Streptomyces coelicolor putative FT transport system permease protein SC4G2.19 TR:O86691 FT (EMBL:AL031371) (601 aa) fasta scores: E(): 1.9e-62, 37.01% FT id in 570 aa" FT /protein_id="CAE48831.1" FT /translation="MRSPRTLATVIIAVATYALALVATALLPWFTGREPAFAVLRARER FT EREATPELLQAIREQLDLPRTPWESVSRWFAGVARGDFGTSWVNPAQGAWAQATHGLGI FT TATLTFVSTVLCLIVALLIVMPRIAAAARGRRGGVAAPQLLAALAALPDFVVAVILLWL FT CALVLHILPVGGWSSPAHMVLPSLALGVCAGGVYGRVLLITADSASQEPWVEAWRINGV FT AHSRITRALLWRSFVPTIPLLTLFFAGTLASTAAVEVTFNIPGFGRTVVNSALNADLPV FT LQAAVFVVLVVGALSGIVANTLRRIILRRLEGDVAGVSLSTGTTATSVVFDRVSLIIAA FT IPLVAVAAGMIRSAAINTDDRFASYSAAHPLGADQLGRDIWARLADGFTYSIGVAVLVT FT ALCALIGLIAGHLGSWVLHIGDALNAFPAVLLGLILAGALGPSTTTAAIAVLMVGWIPL FT ASHCAAVVQEARASGHYRYAATMGASRWHLLRHHVLPWTTPAVIRHAVVRIAHNAISLA FT ALGYLGVGASVGSPDWGVILEESTHYLERAPWMAIGPMLCLVALGVVAAVTTDSVGRRE FT ASSYHQPE" FT misc_feature 290085..290198 FT /note="Signal peptide predicted for DIP0325 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.385 between residues 38 and 39" FT misc_feature order(290103..290171,290388..290456,290514..290582, FT 290625..290693,290772..290840,290925..290993, FT 291084..291152,291246..291314,291333..291401, FT 291414..291482,291609..291677,291720..291788) FT /note="12 probable transmembrane helices predicted for FT DIP0325 by TMHMM2.0" FT misc_feature 291480..291710 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT CDS complement(291817..293310) FT /transl_table=11 FT /locus_tag="DIP0326" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative FT oxidoreductase SCF43A.31 TR:Q9XA84 (EMBL:AL096837) (520 aa) FT fasta scores: E(): 7.8e-84, 44.21% id in 484 aa" FT /protein_id="CAE48832.1" FT /translation="MNSTITPTLNLKAQHAERRVVVTGASGYVGARLVVELLSTGFNVR FT ATSRSLSSLKRFPWYDQVEAVEADLSISEDVNRLFEDVDTVFYLVHSMSGTQNFEELES FT KIASKVAQAAHSNGVRQIIYLSGLHPRTELDKLSPHMRSRENVARILGSTAVPAITFRA FT ATLIGSGSASFEMIRHLTERLPIMVAPQWINNKIEPISIRDTLYYLVKAADLPEPINEE FT FDIGSGHIYTFADLLRIYGKIRGLRRTIVSLPIPLPLDTLSGLWIAAITPAPLSLAQPL FT AQSMQEDAICSNRSIRDYISDPPSGLADYPTSVRRALQQESMGVLSSWDSSWKNLSSTD FT HLPSDPEWTGRTVYSDVQEQSFRSEPAKVWRVIEGIGGHHGWYSTPLLWFVRGVIDKAI FT GGPGLGGRRDPNRLRVGDRVDFWRVEEVTPEKQLTLRAEMRASGQAWLQFTINGNTLRQ FT RAVYFPKGLLGRVYWLALIPFHAVIFPTMLRNIIQAGDN" FT CDS 293451..296345 FT /transl_table=11 FT /gene="topA" FT /locus_tag="DIP0327" FT /product="DNA topoisomerase I" FT /EC_number="5.99.1.2" FT /note="Similar to Mycobacterium tuberculosis DNA FT topoisomerase I TopA or Rv3646c or MT3749 or MTCY15C10.06 FT SW:TOP1_MYCTU (Q59567) (934 aa) fasta scores: E(): FT 3.1e-164, 62.66% id in 959 aa" FT /protein_id="CAE48833.1" FT /translation="MAAKTGNKRLVIVESATKAKKIAPYLGDDYIVEASVGHIRDLPRG FT AADVPAKYKKEPWARLGVNTDKGFEPLYVVSPDKKKKVADLKAKLKLVDELFLATDPDR FT EGEAIAWHLLEVLKPKVPVKRMVFNEITKPAILAAAENTRELDDNLVDAQETRRILDRL FT YGYEVSPVLWKKVMPRLSAGRVQSVATRVIVERERERMAFISADYWDVEAEFDTGKPAQ FT DSNPTSFTGRLTALDGKRVATGRDFNDRGELKGDAVVVDKQRAEALVEELTGVAMSVTK FT VEEKPYTRRPYAPFMTSTLQQEAGRKLHYTSERTMRIAQRLYENGHITYMRTDSTTLSE FT QGLKAAREQAISLYGADYVADAPRRYDRKVKNSQEAHEAIRPAGERFATPGDLHGQLDA FT EEFKLYELIWQRTVASQMADAKGTSMKVTITGNNAEFSATGRTITFPGFLRAYVEVSTL FT ADGRDVADNAESHLPRLAEGDGVETKNLEADGHSTNPPARYTEASLVKKMEDLGIGRPS FT TYASIIKTIQDRGYVYSRGNALVPSWVAFAVIGLLEKSFAALVDYDFTSSMEDELDEIA FT AGHENGAHWLTGFYFGDAEASDAKAESIARHGGLKALVGDNLEQIDARLVNSLPLFKDQ FT EGRDVNVRVGRYGPYLERQVGVSEDGEPEYQRANLSDSTTPDELTLELAEKLFATPQSG FT RELGRNPKNNRMIVAKEGRFGPYVTELVNDDERTEVEAKAEEIVAAEREAEDLQRAAEG FT KRAKNWGTKTAAAQKEKRIAQIIEETLKPSTASLFKTMEPSSVTLDEALQLLALPREVG FT VDPSDNEVITAQNGRYGPYLKKGSDSRTLASEDQIFSITLDEARRIYAEPKRRGRGATS FT QSVIKQLGDNDVSGKPMSVRDGRFGPYVTDGTTNASLRRGDDPTQLTEARANELLSERR FT AKEAADGGSSKKATKKASKKTTKRVAKAGARKKK" FT misc_feature 293472..293816 FT /note="HMMSmart hit to SM00493, No definition" FT misc_feature 293472..293837 FT /note="HMMPfam hit to PF01751, Toprim domain" FT misc_feature 293736..293777 FT /note="FPrintScan hit to PR00417, Prokaryotic DNA FT topoisomerase I signature" FT misc_feature 293814..294080 FT /note="HMMSmart hit to SM00436, Bacterial DNA topoisomeraes FT I ATP-binding domain" FT misc_feature 293877..295175 FT /note="HMMPfam hit to PF01131, DNA topoisomerase" FT misc_feature 293988..294044 FT /note="FPrintScan hit to PR00417, Prokaryotic DNA FT topoisomerase I signature" FT misc_feature 294297..295097 FT /note="HMMSmart hit to SM00437, Bacterial DNA topoisomerase FT I DNA-binding domain" FT misc_feature 294408..294452 FT /note="ScanRegExp hit to PS00396, Prokaryotic DNA FT topoisomerase I active site." FT misc_feature 294423..294452 FT /note="FPrintScan hit to PR00417, Prokaryotic DNA FT topoisomerase I signature" FT misc_feature 294660..294710 FT /note="FPrintScan hit to PR00417, Prokaryotic DNA FT topoisomerase I signature" FT misc_feature 294984..295028 FT /note="FPrintScan hit to PR00417, Prokaryotic DNA FT topoisomerase I signature" FT CDS complement(296265..297290) FT /transl_table=11 FT /locus_tag="DIP0328" FT /product="Putative membrane protein" FT /note="Similar to Streptococcus pneumoniae Pap2 family FT protein SP0489 TR:AAK74647 (EMBL:AE007360) (216 aa) fasta FT scores: E(): 2.3e-06, 30.43% id in 207 aa" FT /protein_id="CAE48835.1" FT /translation="MYGAVVVAGDHQRGAGVGMLRTRKLAQVAEINVVKSLDYLRLWHP FT ILQNLRGRDFPTIELLLLRWRPARSAPPLSPPRTQDFENPWSPKSHRTALPWVFVFLSS FT RSRDRGPKNPTRAQWVPMNRLTAACGLAFVLILGVVVSGFTYDAHITAAFNAHKEGAVG FT SVVGFLYAGLQPRFSLFTTVFIAALVAAVRRKAWLGVCYALTVALTWAPVVVMKVVFQR FT PRPDHALLRFPPEVTPADWSYPSGHTAFVTASVITLYLIAKTAQHQLWRSVAAAGVVLG FT IVAVAAVVMTQGVHYPTDVLGSVVWAGCVAPAISLFLLASTRFGHALGGLFRGFFGRFL FT R" FT misc_feature complement(296322..296765) FT /note="HMMPfam hit to PF01569, PAP2 superfamily" FT misc_feature complement(order(296325..296390,296421..296486, FT 296508..296573,296634..296699,296721..296786, FT 296832..296897)) FT /note="6 probable transmembrane helices predicted for FT DIP0328 by TMHMM2.0" FT misc_feature complement(296346..296699) FT /note="HMMSmart hit to SM00014, Acid phosphatase FT homologues" FT misc_feature complement(296376..296573) FT /note="ProfileScan hit to PS50226, PA-phosphatase and other FT phosphomonoesterases." FT stem_loop complement(297342..297381) FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(297398..299374) FT /transl_table=11 FT /locus_tag="DIP0329" FT /product="opt family protein. Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 opt FT family protein MT2465 TR:AAK46760 (EMBL:AE007086) (667 aa) FT fasta scores: E(): 3.6e-138, 61.18% id in 644 aa" FT /protein_id="CAE48836.1" FT /translation="MSQPDIHKPKVSSPVRELTLRAIIIGGLITLVFTAANVYLGLKVG FT ITFATSIPAAVISMAILRKFAGHTIQENNIVQTIASAAGTLSAIIFVLPGLIMVGWWTG FT FPYWTTAFVCALGGILGVMYSIPLRRALVTGSDLPYPEGVAAAEVLKVGDDASQVTDHE FT ENKRGLAVIIVGALTSAGYSLLAAMKAVTAEIIGTFKLGAGGTIFGSSLSLALIGVGHL FT VGPTVAISMIVGLIISYGVLLPYFSAAGIAAGGELAEVVSTTFVQEVRFVGAGTMAVAA FT IWTLIKIIAPIAKGIKDSLASSRARAAGNNVDITERDIPFTIVLGTILASMLPIGALLY FT LFVHTTEISHHTSTLIILSIVFVLAIGLIIAAVCGYMAGLIGASNSPISGVGIIVVLAS FT ALLIKFVTGNESQSNAPALVAYTLFTSAVVFGIATISNDNLQDLKTGQLVSATPWKQQV FT ALIIGVLFGSIIIPPVLQLMLNGFGFVGAPGAGENALAAPQAALLSSVANGIFGNSLDW FT SRIGLGAIIGVCVIILDEVLRRTKGWSLPPLSVGMGIYLPIALTLIIPIGAFIGLSYDK FT WAARQANPEASKRMGILLATGAIVGESLFGVFNAAIVGGSGKDEPLALFDFGAATQWIG FT LVVFAIMVTVLYKWLRTKSTEAA" FT misc_feature complement(order(297425..297490,297536..297601, FT 297653..297718,297764..297814,297836..297892, FT 297938..298003,298067..298123,298169..298234, FT 298250..298315,298346..298411,298502..298567, FT 298613..298678,298700..298765,298811..298867, FT 298991..299056,299072..299137,299177..299242, FT 299258..299314)) FT /note="18 probable transmembrane helices predicted for FT DIP0329 by TMHMM2.0" FT CDS complement(299461..301524) FT /transl_table=11 FT /locus_tag="DIP0330" FT /product="Conserved hypothetical protein" FT /note="C-terminal region similar to Micromonospora FT viridifaciens sialidase precursor NedA SW:NANH_MICVI FT (Q02834) (647 aa) fasta scores: E(): 1.8e-23, 34.24% id in FT 403 aa" FT /protein_id="CAE48837.1" FT /translation="MTNTLESNPMTTTTGALTITFATTCDGPLAHIPHHLDLNIIHGRI FT QGTTAHRRIDAEDPDGLDDGLPHHLCLSVDTTGTHLFIDGYEAFSTTQTEWFDTSELTL FT NPHGDLTIIDHQILNHAPTPRQARNLAPAAEPLVWFAGSHLSTRDTQRISHLTHGSLRL FT LMKTRGTGQGGVAFQAHTINGDLTLEIIDGTLIFSVRCHDEDYVRITAPGRWDDGHIYD FT VVIVCGRGATDIYVDGQQLIHSPGAAFFNDLSGELSVHIGTSASGVRLFGEVQSGMIYP FT HVFNHHQVQRLATVEPIATQALFDCLLDGAQSYRIPSLITTDSGVIIAGADKRVSIAND FT APNDIDFVLRRSVDGGRTWQPPRTILQLPDTACVTDSVLLQDHTTGRIFAFLDQFPAGI FT GQPNAAFGTGFDADGNRIGHFADGSTCTMPREVDQLEASFFSDPHTAPPGIVFQHPSCH FT LWMLTSDDDGLSWSTPRDLTPDVKEEWMRFCGTSPGNGIQLQRGTHAGRLLIPMYYTKG FT DQFFAAALYSDDHGDTWHRGESPDLEMYESTLVEASDGSVLLWARNQHPSGAVAHARST FT DGGHSWSQVTFNPNVPEIFSQPNALRVTNPDGIIFANASQLLPFRGRGVLRMSTNDGAS FT WQHNRVFNPRHYVYQCMTQLPDGSIGLLWEREMQGLFFSIIPMTWIMQGYAL" FT misc_feature complement(299611..299646) FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature complement(299773..299808) FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature complement(299917..299952) FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature complement(300106..300141) FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature complement(300442..300477) FT /note="HMMPfam hit to PF02012, BNR repeat" FT CDS 301604..302503 FT /transl_table=11 FT /locus_tag="DIP0331" FT /product="Conserved hypothetical protein" FT /note="Similar to Klebsiella oxytoca YiaX1 TR:AAK69523 FT (EMBL:AF282849) (315 aa) fasta scores: E(): 4.4e-18, 31.94% FT id in 313 aa" FT /protein_id="CAE48838.1" FT /translation="MNTTPLVIGAYAALPATRADQETFYDRLHADLEATGLELPFRDSI FT HDDPAWLASQLAGRFTDSIITAIPGTMMRVWDGGTFGLASPDDDGRNAAIAFTRSIIDS FT ARALDDAAGHRVIAGIHIHSAPSVTANRDQFLRSLTELLEGMDNDDPRLIIEHCDRYNE FT AVTGEKRFLSIEQEIAIAKETGIGITVNWGRSAMEAYDTQLPARHIQALVAEGVFEGVM FT FSGAGDKENTFGAAWADLHLPHHVDEPASLMDDDRIAECLSAAGGAQKYHGAKIQAPAD FT VDVATRVTMLGHITRHLR" FT misc_feature 301958..301990 FT /note="ScanRegExp hit to PS00087, Copper/Zinc superoxide FT dismutase signature 1." FT CDS complement(302520..304046) FT /transl_table=11 FT /locus_tag="DIP0332" FT /product="Putative adenylate cyclase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT adenylate cyclase, putative MT3748 TR:AAK48108 FT (EMBL:AE007173) (549 aa) fasta scores: E(): 5.4e-73, 42.99% FT id in 507 aa" FT /protein_id="CAE48839.1" FT /translation="MTKLWRAFKWLFKTSWPLYATTVLGSNVLGAVGVMLFLKYLVPLP FT EFDQFTDEASYLPELGIGYLILAVIFGGAVTFLLFRPVLDWQRHPDTHDPNMVRNLVMR FT IPIYQAALCSVVWALGIVVLAIAAGQTSPRLALAIAVASTLSGAVIVVLTYLEAQRLVR FT PVAATALARRFEDSTLEPPITSRLRLTWALTSAVPIIGILLMVMGHHLGMFTDNVSDIM FT PAVIALAMAALITGFLGTTLSIMSVVDPILELQGAINRVRRGDSGVQVDIYDGSEIGVL FT QAGFNEMMRGLKERQRVRDIFGRYVGVEVARRALEERPQLGGEDREVAVVFVDVIGSTT FT FAVNHDPEEVVEELNRFFEHVVEVVHRNKGIINKFQGDAALAVFGAPVTLSDATGHALT FT AARELRQELMGLRLEAGIGVASGHVVAGHIGGHDRFEYTVIGDAVNTAARLTEIAKNTP FT GRVLTNSATLQRANEAEQARWTMMKSVELRGRSLMTQLARPIRPTLADRS" FT misc_feature complement(302604..303170) FT /note="HMMSmart hit to SM00044, Adenylyl- / guanylyl FT cyclase, catalytic domain" FT misc_feature complement(302694..303062) FT /note="ProfileScan hit to PS50125, Guanylate cyclases FT profile." FT misc_feature complement(302697..303080) FT /note="HMMPfam hit to PF00211, Adenylate and Guanylate FT cyclase catalytic domain" FT misc_feature complement(303156..303314) FT /note="HMMSmart hit to SM00304, HAMP (Histidine kinases, FT Adenylyl cyclases, Methyl binding proteins, Phosphatases) FT domain" FT misc_feature complement(303165..303374) FT /note="HMMPfam hit to PF00672, HAMP domain" FT misc_feature complement(order(303303..303368,303414..303479, FT 303579..303635,303666..303731,303795..303860, FT 303921..303986)) FT /note="6 probable transmembrane helices predicted for FT DIP0332 by TMHMM2.0" FT CDS 304045..305310 FT /transl_table=11 FT /locus_tag="DIP0333" FT /product="Putative DNA polymerase III, delta' subunit" FT /note="Similar to Mycobacterium tuberculosis CDC1551 DNA FT polymerase III, delta' subunit MT3747 TR:AAK48107 FT (EMBL:AE007173) (404 aa) fasta scores: E(): 1.4e-57, 46.59% FT id in 397 aa, and to Escherichia coli DNA polymerase III, FT delta' subunit HolB or B1099 SW:HOLB_ECOLI (P28631) (334 FT aa) fasta scores: E(): 6.9e-11, 28.61% id in 304 aa" FT /protein_id="CAE48840.1" FT /translation="MPTTLTVGYYKRYSIEVMSTEITGSDIFAQMGVSEHIAPILRTAA FT RAARNHDIGSAMTHAWLFTGPPGSGRSVAAVAFAAALECTDPTMVGCGRCEQCRAVLHD FT AHGDVLHIVPRELSIPVEMMRDDVVEPAAKRPTVGQWRVVILDNADRLTPESANALLKT FT VEEPPAHTVIILCAPSTDPTDIIPTLRSRSRHLYVPQPSIDEAVAVLTRDGTIPEPAAR FT LAAATTGGHIGRARWLATNKDAQMRRSAVLNIAELVFHGDQAFRAGGSLVKQITKQAEA FT QLKEENEEEIDKLRNALGMGSRGKGVHKALRGADSAIRDLEALQKKRKTRFVRDHLDMA FT LVDLSGIYRDAIMTHTHATVGLIHPDLSGLSAELAQRVPLAGLVACLDAITICREQIPN FT NVRPEAAFDAMLGRIRIACGAT" FT tRNA 305408..305480 FT /gene="tRNA-Thr" FT /product="transfer RNA-Thr" FT /anticodon=(pos:305441..305443,aa:Thr) FT /note="tRNA Thr anticodon CGT, Cove score 81.26" FT misc_feature 305484..323838 FT /note="Anomalous G+C content (51.29%). Putative FT pathogenicity island. Not present in C.glutamicum. Contains FT a CDS possibly encoding for a starch degrading enzyme: This FT ability of degrading starch is a characteristic of the FT Corynebacterium diphtheria strain gravis and not of strain FT mitis nor strain intermedius" FT CDS 305695..305946 FT /transl_table=11 FT /locus_tag="DIP0334" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48841.1" FT /translation="MIEMLLYEDTRMRAVEILRSLPIGNSGVSGLVQLAATLGASVEFR FT PSIPPFPESLSKKMNKTQKYTSTQMSQKFDNASHSPTK" FT CDS 306195..306602 FT /transl_table=11 FT /locus_tag="DIP0335" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48842.1" FT /translation="MPDVKPQDSAEESNFDKPPAKVAEENKDIDPATKRAIEKPEHPSA FT TPSRKDIDSKFQSPAFYTSLTRWHPRIAYFQFLSGNNFPAEWSPDKRFKNCIEQHLSLY FT KVCYWNDLIMMCSILTLMGIIATLIACKTII" FT misc_feature 306516..306584 FT /note="1 probable transmembrane helix predicted for DIP0335 FT by TMHMM2.0" FT CDS complement(306606..306815) FT /transl_table=11 FT /locus_tag="DIP0336" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 8.5 kDa protein Rv1055 or MTV017.08 TR:O53403 FT (EMBL:AL021897) (78 aa) fasta scores: E(): 0.00013, 45.16% FT id in 62 aa" FT /protein_id="CAE48843.1" FT /translation="MAIAAGADVKTVQLMLGHASAATTLDTYAHLWETGLDSVPGAMSA FT HLQRERERLALRERRRVECELQVI" FT CDS complement(306912..307370) FT /transl_table=11 FT /locus_tag="DIP0337" FT /product="Putative phage integrase" FT /note="Low similarity to bacteriophage BIL309 Integrase Int FT TR:Q9AZR0 (EMBL:AF323670) (377 aa) fasta scores: E(): 0.45, FT 27.41% id in 124 aa" FT /protein_id="CAE48844.1" FT /translation="MIGSGSQRKIGIVIKALLDQAEELDIINKNKIRCTDIPRQGKAER FT RYLTIRGIDRLLAAAIPMNEVALMRNVLLFTGLRPREAKGLKVKDLDPMRGRLSIRRDV FT DDLGNPDETKTRNHRGVPIGGDLLFDLDDQAEGKQPHDWLLTDETGHV" FT CDS complement(307437..307559) FT /transl_table=11 FT /locus_tag="DIP0338" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48846.1" FT /translation="MWDVWIASKQGRTESTKAGYIAAWKHIQPVFGNTACWKIE" FT CDS complement(307596..307805) FT /transl_table=11 FT /locus_tag="DIP0339" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48847.1" FT /translation="MAFVRDLWTKPNPNATSRTKRIRSARWGKGKRWQAVWVKNGKHVT FT TSCHAKDEAELHIARASVGQADGT" FT CDS complement(join(307990..308235,308235..308516, FT 308518..308775)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0340" FT /product="Putative phage protein (pseudogene)" FT /note="Pseudogene. Similar to Salmonella typhimurium LT2 FT putative cytoplasmic protein RhuM TR:AAL22613 FT (EMBL:AE008874) (345 aa) fasta scores: E(): 3.5e-25, 46.87% FT id in 224 aa. Presents frameshifts at residues 86 and 180" FT CDS 308897..309421 FT /transl_table=11 FT /locus_tag="DIP0343" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48849.1" FT /translation="MAHAVTSEQVPNEVVTNGTVDQRRVSSLELSREPNERRDQLLNEG FT FLKEAEQEFPGYTIETYRNTSNGVTVEYDVVAWNDDLTTVTPYINFEWNWDPRIYITGA FT EFWSLGSSGFAGAVCSHFAGWKAGAACSAVASAAWNKIASRHAILSDQTCYDLSQFINI FT GWKRAPQEKCA" FT CDS 309428..309568 FT /transl_table=11 FT /locus_tag="DIP0344" FT /product="Putative exported protein" FT /note="No significant database matches" FT /protein_id="CAE48850.1" FT /translation="MKKIDSLSMRNSRLAPVVCVILVFFLLSTLSFAMGFLHLMQWFLL FT L" FT misc_feature 309428..309526 FT /note="Signal peptide predicted for DIP0344 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.651 between residues 33 and 34" FT CDS 309574..309753 FT /transl_table=11 FT /locus_tag="DIP0345" FT /product="Putative exported protein" FT /note="No significant database matches" FT /protein_id="CAE48851.1" FT /translation="MLARRLGKTKNKESESAIGIIAVGSVVHVLDLAHMIDLPAFGLGL FT IIAGAVVLFVADYL" FT misc_feature 309670..309738 FT /note="1 probable transmembrane helix predicted for DIP0345 FT by TMHMM2.0" FT CDS 309772..309933 FT /transl_table=11 FT /locus_tag="DIP0346" FT /product="Putative IS element tranposase (partial)" FT /note="Similar to Escherichia coli transposase InsI for FT insertion sequence element IS30B/C/D (InsI1 or B0256) and FT (InsI2 or B1404) and (InsI3 or B4284) SW:INSI_ECOLI FT (P37246) (383 aa) fasta scores: E(): 0.72, 45.45% id in 44 FT aa" FT /protein_id="CAE48852.1" FT /translation="MESSGCAIKPQSTVELSQYPEDYLDAVAEELNDRLRKTLEYDKPS FT ERILKLLA" FT CDS 309946..310104 FT /transl_table=11 FT /locus_tag="DIP0347" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48853.1" FT /translation="MQPPLEPAGEKNVHRLEPLTTSEDFSVLADAFGTPYCFWLLGGAP FT GRWRRQA" FT CDS complement(310129..311286) FT /transl_table=11 FT /locus_tag="DIP0348" FT /product="Conserved hypothetical protein" FT /note="Similar to Neisseria meningitidis hypothetical FT protein NMB0459 TR:Q9K0V1 (EMBL:AE002402) (369 aa) fasta FT scores: E(): 1.8e-58, 45.47% id in 365 aa" FT /protein_id="CAE48854.1" FT /translation="MSIFRPKIDITHQYVYSFDMSSTTFDPNRPFNELPPLPPAQVVET FT VPVLKAIIAAKEKLAELRTACQLIPNPEILTSTIPLREARASTEIENIVTTNDELFRAA FT WNVDAEPTPATKEALRYNAALHAGLESIGQRPLSAKTTQIVCGTLQSDEPHIAPFRSYP FT GTFIGNPHTQQRIYTPPEGREVIEQHLSRWERYIYNEHDVDSLVKMALLHYQFEAIHPF FT TDGNGRTGRILNVLYLLQEALLPFPVLYLSGYIVENKAQYYRCLNRVTTESAWEDWLLF FT MVRGVEVAATDAATMIADLRQVQDEITAVIRDAGIISPAKEISEITMVRPYLRIQDVED FT SGLVKRQTAATWLNHLVDIGVLSETKRGRQRIFINDAALRVLTRE" FT CDS 311422..312120 FT /transl_table=11 FT /locus_tag="DIP0349" FT /product="Putative alkylated DNA repair protein" FT /note="Similar to Streptomyces coelicolor putative DNA FT repair protein SCG20A.20c TR:Q9K3M0 (EMBL:AL360055) (216 FT aa) fasta scores: E(): 1.4e-27, 44.54% id in 220 aa, and to FT Escherichia coli alkylated DNA repair protein AlkB or AidD FT or B2212 SW:ALKB_ECOLI (P05050) (216 aa) fasta scores: E(): FT 5.6e-10, 32.46% id in 231 aa" FT /protein_id="CAE48855.1" FT /translation="MLFDSLPRPSERIAPGVAHLPGWLGVDKQAELVREIREIARTYAD FT TPMAMLRPTLKSGGQMSVYQLHLGRYWHYPSYRYIDKIAGTTVPPVPDSLAALAPEALR FT AAAEVAEELAPWVETFVPEMVLVNYYPPGSRMGMHVDEFEESRAPVISVSIGDEALFRM FT GHTESRTQPWDDVTLCSGDLVVFGGPKRFAYHGVVRVNDATLPDGCGLEQGRINITIRQ FT VSAAPNVQGR" FT CDS complement(312169..312993) FT /transl_table=11 FT /locus_tag="DIP0350" FT /product="Putative secreted protease" FT /note="Similar to Streptomyces coelicolor putative FT hydrolase SCBAC14E8.01c TR:Q9ADJ8 (EMBL:AL590435) (228 aa) FT fasta scores: E(): 1.6e-05, 28.49% id in 186 aa" FT /protein_id="CAE48856.1" FT /translation="MRKIVALAAASLLGIAGTSGVLGAATATALTNGTPVSPADDTAAE FT GVVQVASCTGTVVASQWVLTAQHCVEVPNLQRPVYVGTTREQQRREENTFTSDYAVWAP FT HGDVALVHVTDALPQRLVRKVRRAPVSFGEQGRVYGWGAGTGETLQYARAAVGKTSSGV FT RPQGNQHGAFIVQYLDEAKAGRGDSGGPLFVDGEVAGVTSFKAPQGGGRFSLFASLHGL FT GDWIAQTTAAPSPSPRNPNSKNQQSQQPRGPLATPGRSGAGGGGSSLGLSSS" FT misc_feature complement(312301..312906) FT /note="ProfileScan hit to PS50240, Serine proteases, FT trypsin domain profile." FT misc_feature complement(312316..312906) FT /note="HMMPfam hit to PF00089, Trypsin" FT misc_feature complement(312316..312954) FT /note="HMMSmart hit to SM00020, Trypsin-like serine FT protease" FT misc_feature complement(312415..312453) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(312517..312540) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(312643..312687) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(312787..312834) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(312877..312993) FT /note="Signal peptide predicted for DIP0350 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.345 between residues 39 and 40" FT CDS 313246..313617 FT /transl_table=11 FT /locus_tag="DIP0351" FT /product="Putative plasmid replication protein" FT /note="Low similarity to central part of Corynebacterium FT glutamicum replicase RepA TR:Q9EUN5 (EMBL:AF164956) (479 FT aa) fasta scores: E(): 1.8e-16, 56.86% id in 102 aa" FT /protein_id="CAE48857.1" FT /translation="MSSVTAPRLDRATMGRKGGQKAAERWKTDPESDYATAQRETLAAA FT NKRGARQGTGTRGRVLAVYSQTLVDTGEVPTARQIAGEIGITKRMVNIHLKELRDAGLV FT EQGLRDIWACGRNLGGFPV" FT misc_feature 313468..313533 FT /note="Predicted helix-turn-helix motif with score 1076 FT (+2.85 SD) at aa 75-96, sequence PTARQIAGEIGITKRMVNIHLK" FT CDS complement(313721..313888) FT /transl_table=11 FT /locus_tag="DIP0352" FT /product="Putative exported protein" FT /note="Similar to Clostridium perfringens hypothetical 6.1 FT kDa protein SW:YPI8_CLOPE (P18018) (55 aa) fasta scores: FT E(): 1, 42.85% id in 35 aa" FT /protein_id="CAE48858.1" FT /translation="MDVNKLYIISSVIMAIAGIVVLFNRNFLAASAMLIASGLAADIYR FT LRNNMSGNQR" FT misc_feature complement(313766..313888) FT /note="Signal peptide predicted for DIP0352 by SignalP 2.0 FT HMM (Signal peptide probability 0.977) with cleavage site FT probability 0.291 between residues 41 and 42" FT CDS complement(313903..314421) FT /transl_table=11 FT /locus_tag="DIP0353" FT /product="Putative exported protein" FT /note="Similar to N-terminal region of Streptococcus FT pneumoniae 3-hydroxy-3-methylglutaryl-CoA reductase SP1726 FT TR:AAK75803 (EMBL:AE007465) (424 aa) fasta scores: E(): FT 8.7, 26.38% id in 144 aa" FT /protein_id="CAE48859.1" FT /translation="MKKFGLLSIPLGMALILSAVESPANVQSSMSSVPQTLGATSSLGI FT PDDEVEQLLTAIDSIPDEVLAEGDEATAEWVQENLASKEIVPYIATEVACAGAILWAIG FT STLLPVAKIIKSKKAIKALGGVKAAVSQLAQKGFNWPSIQQTGGALRDLGAELIGVAGV FT SDTVSTKIQ" FT misc_feature complement(314305..314421) FT /note="Signal peptide predicted for DIP0353 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.365 between residues 39 and 40" FT CDS complement(join(314471..314635,314637..314750, FT 314856..315488)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0354" FT /product="Putative IS element tranposase (pseudogene)" FT /note="Pseudogene. Similar to Streptomyces coelicolor FT insertion element IS110 hypothetical 43.6 kDa protein FT SC3C8.10 and SCC57A.30c and SCG2.18 and SC5E9.30 FT SW:YIS1_STRCO (P19780) (405 aa) fasta scores: E(): 7.8e-21, FT 37.09% id in 337 aa. Presents frameshifts at residues 211 FT and 249" FT /db_xref="PSEUDO:CAE48860.1" FT misc_feature complement(314991..315287) FT /note="HMMPfam hit to PF01548, Transposase" FT CDS complement(315605..315754) FT /transl_table=11 FT /locus_tag="DIP0356" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48861.1" FT /translation="MFPPFPHPPSGLEELVAGFGMALIHPVKKIIQGVMPPKAVTYSNS FT SIGT" FT CDS 316102..323838 FT /transl_table=11 FT /locus_tag="DIP0357" FT /product="Putative secreted bifunctional (alpha-amylase and FT endo-alpha-glucosidase): starch degradation and integral FT membrane protein" FT /note="C-terminal region Similar to Deinococcus radiodurans FT alpha-dextran endo-1,6-alpha-glucosidase DR0405 TR:Q9RXB0 FT (EMBL:AE001900) (910 aa) fasta scores: E(): 3.1e-110, 41.4% FT id in 942 aa, and N-terminal region similar to Streptomyces FT lividans alpha-amylase precursor Amy SW:AMY_STRLI (Q05884) FT (919 aa) fasta scores: E(): 1.4e-86, 41.56% id in 676 aa" FT /protein_id="CAE48862.1" FT /translation="MRDSALPRYFRALVAVISAISLVGVGLHATQPTARADEELAPAVV FT AGTFQKNLGCSKEWEESCDKTRMKRKGNLYATTLKIPEGDWKFKVVLNGDWGTSYGAPG FT FDENNIPLKLTKDTELEFSFDPLSHRIGLKPVGLDDEKLKTYDDSKDKDIVGAPFKHSA FT AGKNFYFVLTDRFQNGNPENDRGGAKDGDKNDHGFDPTDKAYYHGGDIEGLIKQLDYIK FT NLGTTALWLTPSFKNRAVQCGHDPKDCSSGYHGYWITDFTQIDPHLGSNDDLKRLIEEA FT HNKGIKVYFDIVANHTADLIQLAGGNQYISEDQQKYKDVDGKEFLLKDYAGKKEFPELN FT DFSFPYKPIRKPEDNIIVPKELNDVHLYHNRGNNTWEGESVIHGDFEGLDDLMTEHPKV FT VSHMIEAYNKWAGFGLDGFRIDSVKHVNMEFWKEWTEAVKKHAKESRAGEKEDFFMFGE FT VFNGTAESLSPFVRDTQMDAALDFAFHYKALDFAKGQSTQGLHDLFYSDDWYTTTRSDA FT TNLPTFLGNHDVGRIGYLLRDNDDKVQRDVLAHQLMFLTRGQPVVYYGDEQGFAGTGDG FT KDKQARQDMFGTQVDEFKNEQDIYGKQLGSDNHFKESGELYGKIKQLAELRTANKALAT FT GAQIERWETPGPGIYAFSRVDRDEKQEYLVALNNSHLEQTATPAPLTPNASFTKIYGEG FT PDKISPNLDGTVNLKLPRLSAVVYKVESNQKVSGAVDGTGLSVKGQALKDNAPIMTNIG FT GKAWSETSFAWRELGTEEWKKLGTDTGQNARVFHDVRDLKPGTIVEYRTVTVDADNNKT FT ASTGWGVVGVDLGVDTAALLAPSAVVAGDFTKDLGCTGGDQGNWDPACAKTELKSVGGT FT DWHTVKLNLKAGEHQYKIAVAGSWNENYGQEKDGDRPNDRGYHNGKNVKFNLDREQEVQ FT FFYNPVTNEFFNSVEHGVITLPGTMGGALNCPKNDQKSDEHGNWGPACLATLMTKTGDH FT IYEFSSPKVPTPGNYDVKVAYGLEWGNDWGPDGHKTQRNYDVKITDSGILHYRWDENKH FT ELTWNITERSSLDLQDTFAHWLDDRTIAVPRSQLRDASPSDVEGLLVSVSDGKPSIKSG FT KGASSQADAKIEEQKLHYVGQIGGDLLARNPHLDGMVTFRFKDEVQKDKARELLQGGLG FT FAVVKKKEQEPVSFTGVQIPGVLDAHYAADARDAQLGVHWKGDKPTVSLWAPTAKNVKL FT KLFGEEGSLGNGEDHKMDYDKTTGVWSVEGKPDWKNHAYQFEVEVYAPSTHKVEHNLTT FT DPYSVGLSMDSKYSVMLNLNDPELKPADWGKAMDPIDPVDRMIYELHVRDFSASDKSMD FT QQYRGKYKAFTQSGSKSVMHLKELADAGLNSVHLLPTNDIATIPEDPAKAKTPAITSTG FT AADTQQQEAVAAVQKEDAFNWGYDPYHYMAPEGSYATKPDAKTRVKEYREMVKALNGMG FT LHVVSDQVYNHAFQGQQDEKSVLDKVVPGYYHRLMLDGKIANSTCCANLATEHVMMEKL FT MTDSVKSWAKNYHIDGFRFDLMGHHSAANMINVQTELSELTVEKDDIDGSSIYLYGEGW FT NFGEVENNQRFIQATQENLAGTGIGTFNDGLRNGVHGHEGRTQGFGTGLAMEGNGTDQK FT DQGHLRHLTDIVRVGMAGNLQDFKFNSKDGYKRGGDIWLDGKRIGYGLMPQDTVNYVDA FT HDNQTLYDLSVLQLPQSLSMDDRVRMNTVQLATVALGQSPAFWHAGTEIMRSKSLDRDS FT YNSGDHFNKLDLSMQEHNFGVGLPIAEKNDKQWELYKGFLNDEHLKAKPEDLKKANDMA FT KELMTLRKDNPLMRLGDVDQIQEKVTFPANGPDAQPGLIVMNIDDTKGEDRDAKRDGIL FT IVINSSPKQIEQTINELEGLDFTLEKTLAEGVDKETQKGSTWNKAEKKLTIPARTVAVF FT ERTQNEAAHHDPQYPETKVFKDATEDVKVEGPKDMPETAKYSIDPAVDGVSVDEKTGAL FT TVKPTAIKEDGLVVTVTVKYSDGSEDRAVAKFVTDTSIASMYDPTYEETKAESADKKVT FT IKKPMSGEKSLPEDAHFTLEGESAKKATIDGFTGEITVEPLKDERRLELDVKVTYADES FT VDMVKAVVVAGDTLADQHDPKYADTQMEKGTKTVIAAPEGMPENIKYELAEPQDGVTVR FT DDGSIEVTTDAESLDIKVKVTYSDKSTDTAVAHVTTVAQTEQSVEVTPGTQTLVDVPGN FT GDVTVTVPQNSGLKAEVAGNLVTLTSDGSVEGHVTVTYQVKDADGKTTTGKINVQVAKL FT AEASWPKSASVAAGDSTVITPEGVDTLPYGTTLSVGSLPEWATFDQTTGQLTLTADEDA FT TDESTTATITVAYPDGLTKQYSVALSVGAATETTADQHDPQWESVVVNGDSVTSHGVDV FT PADAEVSVDKLPEGWTATVTGSDVEITPAAGSPAGHVIALPVTVRYADGTTDTAVINVL FT TQPDWSTSNKAPKADSGMFYQAGPGAPAWVRVNNDGSMTWADNAPEGTHEIPVIVTKDG FT VHYLVTASVNAPKKVVLDTEGSSSILGVVVAILAAGGIMALFALLFNCTWFKNCR" FT misc_feature 316102..316209 FT /note="Signal peptide predicted for DIP0357 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.874 between residues 36 and 37" FT misc_feature 316612..317982 FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT misc_feature 319699..319986 FT /note="HMMPfam hit to PF02922, Isoamylase N-terminal FT domain" FT misc_feature 323740..323808 FT /note="1 probable transmembrane helix predicted for DIP0357 FT by TMHMM2.0" FT CDS complement(323875..325527) FT /transl_table=11 FT /locus_tag="DIP0358" FT /product="Putative CoA-ligase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT substrate--CoA ligase, putative MT1470 TR:AAK45735 FT (EMBL:AE007017) (535 aa) fasta scores: E(): 8.6e-57, 36.1% FT id in 529 aa" FT /protein_id="CAE48863.1" FT /translation="MPQIAPLLTTLTSMARHMPTIAASGLLSTEGKPLAALSTPATMAR FT YRFTTAREVEQAARVCPDRIALIDDDGSLTYQELRDNSRALARYFYQLNSKDLRIGVMA FT RNGRGSIYPLTAKGYAGASIYLLNIGSSRDQLDGCIRRDGINLLVIDEEFLPRLPENIQ FT IPVIVAHREAEPHPRAAECLDLEEIVATHTSGNLPVFPQHGAIVLMSSGTTGIPKGVMR FT NEPKAPTILGAVLSEIPFRTNMNVQLTASVFHTWGWGILNLSFAMRCTVVTRRIFDPER FT TLRDVERFKIHAMISSPIFLKRFFEVEGQEDIDCSSLEFIFSSGHALSPWLVEAVHNRF FT GKILCNLYGSTEISAAAIANMEEVAKNPTVAGKICEGTTVRILDDNDQPVPAGTVGRIF FT CYNNTTLNGYTDPRIPIKRVGELVQIGDRGYIDERGLLYVLGRADDMIIVGGENVFPRS FT VEEVLEPMPGIQDLYASGVDDDETFARIAVWIVKSPTAAGEALTEDAVRDWVRTKLADH FT SIPRDVHFIDELPRNATGKVMPRMLPGISHPTA" FT misc_feature complement(324106..325305) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT misc_feature complement(324874..324909) FT /note="ScanRegExp hit to PS00455, Putative AMP-binding FT domain signature." FT CDS 325657..326445 FT /transl_table=11 FT /locus_tag="DIP0359" FT /product="Putative secreted hydrolase" FT /note="Low similarity to Streptomyces scabies esterase FT precursor EstA SW:ESTA_STRSC (P22266) (345 aa) fasta FT scores: E(): 0.12, 26.28% id in 331 aa" FT /protein_id="CAE48864.1" FT /translation="MRLLTAFCATLLGLLAAPPAHAGIAHDNVVIFGDSMVADPLVSEV FT ITGRLSSQPHCPHSPTSYAEIAAKRLGLESRNFSCAGAQVHIGGPFLKTSFIAQIDTAI FT AAGALDTHTRRVWITQGFNDAWSGHPAAQVVATMSEVIGRIRAHAPNARIQIVGYPQIT FT HQGQLCLVRLPGQPAWPIAAAVIAAWEDQALLIQREVAAATGSELIDVRSATADHSMCA FT PDEQRYISSVVDVAGASTHLPVHVNERGHQGIADLIVRSR" FT misc_feature 325657..325722 FT /note="Signal peptide predicted for DIP0359 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.977 between residues 22 and 23" FT CDS complement(326409..327281) FT /transl_table=11 FT /gene="rfbA" FT /locus_tag="DIP0360" FT /product="glucose-1-phosphate thymidylyltransferase" FT /EC_number="2.7.7.24" FT /note="Similar to Escherichia coli glucose-1-phosphate FT thymidylyltransferase RfbA SW:RBA2_ECOLI (P55253) (293 aa) FT fasta scores: E(): 1.5e-64, 59.93% id in 287 aa" FT /protein_id="CAE48865.1" FT /translation="MKGIILAGGSGTRLHPITLGISKQLMPIYDKPMIYYPLTTLIQAG FT ICEILIITTPEDQAAFQRLLGDGSSWGIELSYAVQPRPDGLAQAFIIGRDFIGNDSVAL FT ALGDNIFDGPALGQALKGCHSPDGGTVFAYEVSDPSRYGVVTFDATGTALSIEEKPAHP FT RSNYAVVGLYFYNNDVVRIAETTTPSARGELEITAINDAYLQQGKLHVRKLERGDVWLD FT TGTIDSMSEAASYVEVLQKRTGVIIGSPEVAAWKAGLITDTQLEALAQPLKKSGYGNYL FT LRTIRSAIP" FT misc_feature complement(326565..327278) FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase" FT CDS complement(327293..328639) FT /transl_table=11 FT /locus_tag="DIP0361" FT /product="Putative bifunctional protein" FT /note="N-terminal region similar to Streptococcus FT pneumoniae dTDP-4-keto-6-deoxyglucose-3,5-epimerase CPS19AM FT TR:Q9Z642 (EMBL:AF105113) (197 aa) fasta scores: E(): FT 2.5e-29, 51.68% id in 178 aa, and C-terminal region to FT Serratia marcescens putative dTDP-L-rhamnose synthase RmlD FT TR:O52480 (EMBL:AF038816) (288 aa) fasta scores: E(): FT 6.7e-28, 38.79% id in 281 aa" FT /protein_id="CAE48866.1" FT /translation="MQVRPTAIAGVVIVDLDLHGDNRGWFKENWQREKMVAAGLPDFQP FT VQNNISFNAERGVTRGLHAEPWDKFVSVAHGEVFGAWCDLREGSDTFGEVVTCTITPHT FT AVFVPRGVANGFQALVDNTSYTYLVNDHWSPDATYTAVNLDMIDWPLPPTEISEKDRCH FT PQLAEATPMPPRRILITGAHGQLGRALAELLPDAELCSHVDFDVVHPPQRSWRQYEAII FT NCAAYNNVDAAEDDRARAWEVNAVAPARLAQIATENNLTLVHVSTDFIFDGTTSVHEET FT EAPSPLSVYGASKAAGDIAAAVTPKHYVVRTSWVFGQGGNFVETMRSLAQRGIRPNVIS FT DQRGRPTHAADLAAGIVHLLRSSADYGVYNLSNSGDVVGRDDLARAVFEHCGVSGEAVT FT SVTTAEYEVHRGPLAKRPAESTFNLDKIVATGFQPRPWRDAVRDYLGTK" FT misc_feature complement(328133..328633) FT /note="HMMPfam hit to PF00908, dTDP-4-dehydrorhamnose FT 3,5-epimerase" FT misc_feature complement(328136..328621) FT /note="BlastProDom hit to PD001462, PD001462" FT CDS complement(328678..329685) FT /transl_table=11 FT /gene="rmlB" FT /locus_tag="DIP0362" FT /product="Putative dTDP-(glucose or FT rhamnose)-4,6-dehydratase" FT /note="Similar to Mycobacterium leprae putative FT dTDP-(glucose or rhamnose)-4,6-dehydratase RmlB TR:Q9X7A3 FT (EMBL:AL049491) (331 aa) fasta scores: E(): 8.3e-84, 63.77% FT id in 334 aa" FT /protein_id="CAE48867.1" FT /translation="MAVKRMLVTGGAGFIGSNFVRRVLATRPEYRVTVLDKLTYAGNAA FT NLDGCDATLVVGDICDAQLVDRLVADSDVVVHFAAESHNDNSLVDPSPFVQTNVVGTFT FT LLEAARRHDVRFHHVSTDEVFGDLELDDPNRFTEHTPYNPSSPYSATKAGSDHLVRAWV FT RSFGLRATISHCSNNYGPYQHIEKFIPRQITNILSGLTPKLYGTGEQVRDWIHVDDHND FT AVIRILESGRIGQTYIIGADNDHVNNKTVITLICELMGADGFEHVADRPGHDMRYAMDS FT STLRAELGWQPRFTDTDTGMREGLLQTIEWYRTHRDWWEPQKAAVEQRYLAQGH" FT misc_feature complement(328738..329670) FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase family" FT CDS complement(329691..331043) FT /transl_table=11 FT /locus_tag="DIP0363" FT /product="Putative metallopeptidase" FT /note="Similar to Streptomyces coelicolor putative FT metallopeptidase SCD95A.06c TR:Q9KXW8 (EMBL:AL357432) (473 FT aa) fasta scores: E(): 5.2e-42, 32.16% id in 457 aa" FT /protein_id="CAE48868.1" FT /translation="MSRLRSTPIPGTRDSYTQVDFNLGFHVRHYDVSLDYVVAPNRLKA FT VVTLSMDTYQPLRSLTLDLSDALTVKSVTAQGTSAVAVRVQKFRHRNHKLRISFTEEIP FT VDQEFKITVTYSGNPRPIRSTWGLIGWEELSNGSLVASQPNGARSWLPCDDTPDEKALY FT TMSITCDSPYTVVANGELLGTTRHGSRTQWRYQTQHPMASYLATVQVGRYERYELGAAG FT EVPVIAYAPPALAAGVRHDFSDQTAMLELFSQLFGPYPFDQYSVVVTEDDLEIPLEAQG FT LSIFGANHAGGTKQWERLIAHELAHQWFGNSLGLAQWDDIWLNEGFACYAEWLWFEHSA FT GIPAAVTASQHYERLAQLPADIVVAAPGARDMFDDRVYKRGALTLHALRTLLGSAAFFR FT AIARYVAAGRHCVVEPVDLRRELLKEVDSSAQLDALWHAWLYETALPECPR" FT misc_feature complement(330030..330155) FT /note="HMMPfam hit to PF01433, Peptidase family M1" FT misc_feature complement(330054..330092) FT /note="FPrintScan hit to PR00756, Membrane alanyl FT dipeptidase (M1) family signature" FT misc_feature complement(330102..330149) FT /note="FPrintScan hit to PR00756, Membrane alanyl FT dipeptidase (M1) family signature" FT misc_feature complement(330120..330149) FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT misc_feature complement(330240..330971) FT /note="HMMPfam hit to PF01433, Peptidase family M1" FT misc_feature complement(330414..330461) FT /note="FPrintScan hit to PR00756, Membrane alanyl FT dipeptidase (M1) family signature" FT misc_feature complement(330555..330602) FT /note="FPrintScan hit to PR00756, Membrane alanyl FT dipeptidase (M1) family signature" FT CDS complement(331040..333034) FT /transl_table=11 FT /locus_tag="DIP0364" FT /product="Putative prolyl oligopeptidase family protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 prolyl FT oligopeptidase family protein MT0473 TR:AAK44697 FT (EMBL:AE006950) (673 aa) fasta scores: E(): 9.6e-118, FT 46.64% id in 671 aa" FT /protein_id="CAE48869.1" FT /translation="MHHPPVEELELIDSPAALEWAREWSQATQERWSNDALQRSIREAL FT DTDARIPYVTRRGEYLYNFWRDRDHPRGVWRRTTLESFTSDSPQWQVLIDVDRLAASEE FT ESWVWKGAHVRPHHFDRALIRLSRGGADAVEIREFDLDSGSFVEDHAFAVPEAKTQVCW FT VDRDTVLVGTDMGAGSLTESGYPARVHVWRRGTNLAEAEEFFCGLSSDLAVSAWAETVP FT GFERLFVRRALDFYRSRTFIQRDGHLQIIEVPEDCTVVVHREWMYVLPREEYAGIASGG FT VGAILFEDFLAGRRDFFTVFSPTPQSSVQDLTLTASYVVLTILEDVTSRIEVVDRGAPG FT SASRRINVGDMVTARVVAADSESDELWLGASSFTQPDTLYRVELGQHTTPEVAKQAPAL FT FDASRMETRQHWATSADGTKIPYFIVGDFSQGPRPTLVGGYGGFEVSLVPGYSSIRGRA FT WLSKGNYFVQPNLRGGGEFGPHWHESVIRRHRMKIYEDHQAVLEDLRQRGYASQIAVRG FT GSNGGLLTSVALTRYPEAIDAAVIQVPLTDMLRYHTWSAGASWMAEYGDPDDPAERAVL FT ESYSPLHHVAARAQVAYPPALVTTSTRDDRVHPAHARLFARALEVAGQAVDYWENSEGG FT HAGAADNAQVAASEAMIYTWLLDALGGVR" FT misc_feature complement(331190..331258) FT /note="FPrintScan hit to PR00862, Prolyl oligopeptidase FT serine protease (S9A) signature" FT misc_feature complement(331274..331321) FT /note="FPrintScan hit to PR00862, Prolyl oligopeptidase FT serine protease (S9A) signature" FT misc_feature complement(331424..331486) FT /note="FPrintScan hit to PR00862, Prolyl oligopeptidase FT serine protease (S9A) signature" FT misc_feature complement(331433..331735) FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT misc_feature complement(331463..331699) FT /note="HMMPfam hit to PF00326, Prolyl oligopeptidase FT family" FT misc_feature complement(331511..331570) FT /note="FPrintScan hit to PR00862, Prolyl oligopeptidase FT serine protease (S9A) signature" FT misc_feature complement(331580..331654) FT /note="FPrintScan hit to PR00862, Prolyl oligopeptidase FT serine protease (S9A) signature" FT misc_feature complement(331679..331735) FT /note="FPrintScan hit to PR00862, Prolyl oligopeptidase FT serine protease (S9A) signature" FT misc_feature complement(331847..333034) FT /note="HMMPfam hit to PF02897, Prolyl oligopeptidase, FT N-terminal beta-propeller domain" FT CDS complement(333123..334190) FT /transl_table=11 FT /gene="slpA" FT /locus_tag="DIP0365" FT /product="surface layer protein A" FT /note="Similar to Corynebacterium ammoniagenes surface FT layer protein A SlpA TR:BAB62413 (EMBL:AB055224) (358 aa) FT fasta scores: E(): 1.4e-69, 52.76% id in 362 aa, and to FT Mycobacterium tuberculosis antigen 85-A precursor FbpA or FT MPT44 or Rv3804c or MT3911 or MTV026.09c SW:A85A_MYCTU FT (P17944) (338 aa) fasta scores: E(): 9.7e-18, 31.56% id in FT 320 aa" FT /protein_id="CAE48870.1" FT /translation="MKFRRSLAALSIAATSVVGTMVAPAQAANLNPDTVRGQVAPATVY FT EGATPGLNPAWREKATGDRVVEMWAHSPSMNRNVPLVVLKAANPGRPTIYLLNGGDGGE FT GSANWVMQTKALDFYRDKDVNVVIPMAGKFSYYTDWVSEAPSLGGKQNWETFLTKELPG FT PIERHLGASNKRAIAGLSMSATSALVLAEHAQGFYDAAGSFSGCAATSSPLTYHFLRLT FT LERGGATPEQMWGPQGSEVNRYNDALINAERLRGTEVYVSNNSGAVGKYDLPSSPRLAG FT KDPVTIFATNLITATEGGIIEAGTNMCTHDLKVKMDSLNIPATFNFRNTGTHSWGYWEE FT DMVASWELFNMAFNK" FT misc_feature complement(333408..334052) FT /note="HMMPfam hit to PF00756, Putative esterase" FT misc_feature complement(334110..334190) FT /note="Signal peptide predicted for DIP0365 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.823 between residues 27 and 28" FT CDS complement(334217..334318) FT /transl_table=11 FT /locus_tag="DIP0366" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE48871.1" FT /translation="MPYFFYLLFYQAVNIFFLESDDSTKCSSHSSPL" FT CDS complement(334359..334622) FT /transl_table=11 FT /locus_tag="DIP0367" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48872.1" FT /translation="MPSAQIKQKDGLPRSVAFGVGHWCSDLSEESQKVENKAQSGRSRV FT AKSTENAGDCKDNLIHGKRTPYLTWVSAFHCDVTQVNQSSLL" FT CDS 334658..336067 FT /transl_table=11 FT /gene="lpd" FT /locus_tag="DIP0368" FT /product="dihydrolipoamide dehydrogenase" FT /EC_number="1.8.1.4" FT /note="Similar to Corynebacterium glutamicum FT dihydrolipoamide dehydrogenase Lpd TR:Q9Z466 (EMBL:Y16642) FT (469 aa) fasta scores: E(): 1.1e-135, 78.03% id in 469 aa, FT and to Zymomonas mobilis dihydrolipoamide dehydrogenase Lpd FT SW:DLDH_ZYMMO (P50970) (466 aa) fasta scores: E(): 5.7e-66, FT 43.55% id in 473 aa" FT /protein_id="CAE48873.1" FT /translation="MTEHYDVVVLGAGPGGYVAAIRAAQLGKKVAVVEKQYWGGVCLNV FT GCIPSKALLKNAEVAHIFNHEAKTFGISGDVSFDFGAAHKRSRQVSSGIVKGVHYLMKK FT NKITEIDGLGSFKDAKTIEITEGNDAGKVVTFDDCIIATGSVVRSLPGVTIGGNIVSFE FT EQILKEEAPKSMVIVGAGAIGMEFAYVLVNYGVDITIVEFMDRVLPNEDADVSKEIAKQ FT YKKLGVKLLTGYKTTAITDNGDNVTVEVESKDGSKKDSLTVERCMVSIGFAPRVEGYGL FT ENTGVKLTERGAIEIDDFMRTNVDHIYAIGDVTAKLQLAHVAEAQGVVAAEVIAGAETQ FT ELGDYMMMPRATFCNPQVASFGYTEEQAKAKFEGREIKTATFPFSANGKAAGLAETAGF FT VKIVADAEFGEIVGAHMVGANVSELLPELTLAQRFDLTCEEIGRNVHTHPTLSEAMKEA FT AEGIMGHMINL" FT misc_feature 334673..334741 FT /note="FPrintScan hit to PR00469, Pyridine nucleotide FT disulphide reductase class-II signature" FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 334673..335623 FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase" FT misc_feature 334676..334762 FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature 334703..334759 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 334769..334816 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 334772..334804 FT /note="ScanRegExp hit to PS00076, Pyridine FT nucleotide-disulphide oxidoreductases class-I active site." FT misc_feature 334808..334867 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 335072..335101 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 335165..335239 FT /note="FPrintScan hit to PR00469, Pyridine nucleotide FT disulphide reductase class-II signature" FT misc_feature 335177..335230 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 335177..335254 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 335180..335275 FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature 335447..335491 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 335561..335617 FT /note="FPrintScan hit to PR00469, Pyridine nucleotide FT disulphide reductase class-II signature" FT misc_feature 335576..335599 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 335687..335752 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 335699..336034 FT /note="HMMPfam hit to PF02852, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain" FT misc_feature 335888..335935 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 335933..335992 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 335954..336016 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT CDS complement(336275..337699) FT /transl_table=11 FT /locus_tag="DIP0369" FT /product="Putative regulatory protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT DNA-binding protein, putative MT0481 TR:AAK44705 FT (EMBL:AE006950) (474 aa) fasta scores: E(): 2.8e-101, FT 55.34% id in 477 aa" FT /protein_id="CAE48874.1" FT /translation="MGMTYVGSRLRQLRKERDLTQAALAELLGISASYINQIEHDVRPL FT TPQVLRKITASFGVDATFFSRDDSSRLIAELHDVMFDKEVCPQPIDVTELSTLVDHHPE FT AARAMVEMHRRYRRLRDNLDAVTDKRRLSGLDTPNPLAVLSMPHDEVRDFFYSHHNYLD FT ELDRIAERIATELGITTFNIRANEAALTQRLQEDHDVKIIPSVDLGATLHKFDNVSRQL FT TLSTRLIAGQRAFRLAAELGYLEAGEQMHALVADGHFQSEEARRLALRGIASYFAAAVM FT LPYGIFHQQAEKCGYDIEYLCQVFGLGYETVCHRLSTLQRPQLKGIPFTFVRVDRAGNI FT SKRQSATGFHFTHSGGTCPLWNVYEAFSSPGTIMRQLSEMPDGRSYLWIARTVRHHQGR FT FSEPGKIFSIGLGCEARHAHRTVYTAGLDLDGFSNAVPIGAGCRVCSRTNCPQRAFPAV FT NTLLSIDPHASQVAPY" FT misc_feature complement(337121..337204) FT /note="ScanRegExp hit to PS00622, Bacterial regulatory FT proteins, luxR family signature." FT misc_feature complement(337508..337672) FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT misc_feature complement(337508..337675) FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature complement(337580..337645) FT /note="Predicted helix-turn-helix motif with score 2003 FT (+6.01 SD) at aa 19-40, sequence LTQAALAELLGISASYINQIEH" FT CDS 338150..338908 FT /transl_table=11 FT /locus_tag="DIP0370" FT /product="Putative succinate dehydrogenease cytochrome B FT subunit" FT /note="Low similarity to Bacillus pseudofirmus succinate FT dehydrogenease cytochrome B-558 subunit DhsC SWALL:O54447 FT (EMBL:U91843) (159 aa) fasta scores: E(): 0.011, 28.22% id FT in 163 aa, and to Streptomyces coelicolor putative FT cytochrome B subunit SCM10.12c TR:Q9RCY6 (EMBL:AL133469) FT (243 aa) fasta scores: E(): 1.8e-18, 36.01% id in 236 aa" FT /protein_id="CAE48875.1" FT /translation="MTVNNIDRDAIAHGKITEKPLRERPQFPTWALKLGMAVTGLIFAF FT FVVFHMVGNLKIFLPFYEDGTHPIDIYGEWLRNLLYPLLPHGVFLWIFRLVLLACIVIH FT IYGAFALTARSHQSRGKFRRTNLMGGMNSFTTRTMLVTGIVLLAFIIFHILDLTVGAAP FT AASDAFEHGAIYANMVAGFSRWPVTIFYVIAMVTLFMHLSHGIWLATSDLGITGKRWRA FT VMLFLAYLVPAIVMIGNIAIPLSIALGLVG" FT misc_feature order(338237..338305,338417..338485,338546..338614, FT 338708..338776,338813..338881) FT /note="5 probable transmembrane helices predicted for FT DIP0370 by TMHMM2.0" FT CDS 338927..340942 FT /transl_table=11 FT /locus_tag="DIP0371" FT /product="Putative succinate dehydrogenase" FT /EC_number="1.3.99.1" FT /note="Similar to Bacillus subtilis succinate dehydrogenase FT flavoprotein subunit SdhA or CitF SWALL:DHSA_BACSU FT (SWALL:P08065) (585 aa) fasta scores: E(): 5.8e-26, 34.71% FT id in 579 aa, and to Escherichia coli fumarate reductase FT flavoprotein subunit FrdA or B4154 SWALL:FRDA_ECOLI FT (SWALL:P00363) (601 aa) fasta scores: E(): 5.7e-18, 31.72% FT id in 580 aa" FT /protein_id="CAE48876.1" FT /translation="MSINSDTTVSTDFTQPASIVDGVKLGSILESHEPKGVPTKDMWEY FT QKNHMNLVSPLNRRKFRVLVVGTGLSGGGAAAALGELGYDVKVFTYHDAPRRAHSVAAQ FT GGVNAARGKKVDNDGAYRHVKDTVKGGDYRCRESDCWRLAYESVRVIDHMNAIGAPFAR FT EYGGTLATRSFGGVQVSRTYYTRGQTGQQLQLAGAAALQRQIGLGTVEIFTHNDLADLV FT LTEKDGKKRCEGVVMRNLITGELTAHTGHAVILATGGYGNVFHMSTLAKNSNASAMMRA FT YDHGAYLASPSFIQFHPTGLPVNSEWQSKTILMSESLRNDGRIWSPLEPKDDRDPNTIP FT EEERDYFLERRYPAFGNLVPRDVASRAISQQINKGLGVGPLHNSAYLDFRDAISRLGED FT TIRERYSNLFQMYEEAIGENPYKAPMRIAPTCHFTMGGLWTDFNEMTSIDGLFAAGECS FT WTYHGANRLGANSLLSASVDGWFTLPFTIPNYLANHLGEPRLAEDSAEAQEAVNRAKAR FT IDKLMNIKGNDPHGPEFFHRQLGEILYFSCGVARNVEDLKTGIQKIRALRKEFWANLRI FT TGAADEMNQVLEYASRVADYIDLGELMCVDALDRDESCGAHFRDDHLSEEGEAERDDDN FT WCFVSAWEPGAVEGEFIRHAEPLTFEAIPLMTRNYK" FT misc_feature 339413..339892 FT /note="HMMPfam hit to PF00890, FAD binding domain" FT misc_feature 339962..340351 FT /note="HMMPfam hit to PF00890, FAD binding domain" FT misc_feature 340532..340936 FT /note="HMMPfam hit to PF02910, Fumarate reductase/succinate FT dehydrogenase flavoprotein C-terminal domain" FT CDS 340942..341691 FT /transl_table=11 FT /locus_tag="DIP0372" FT /product="Putative succinate dehydrogenase iron-sulfur FT protein" FT /note="Similar to Bacillus subtilis succinate dehydrogenase FT iron-sulfur protein SdhB SWALL:DHSB_BACSU (SWALL:P08066) FT (252 aa) fasta scores: E(): 1.3e-08, 27.45% id in 255 aa, FT and to Escherichia coli succinate dehydrogenase iron-sulfur FT protein SdhB or B0724 SWALL:DHSB_ECOLI (SWALL:P07014) (238 FT aa) fasta scores: E(): 6.8e-08, 29.43% id in 248 aa" FT /protein_id="CAE48877.1" FT /translation="MKLHLEIWRQAGPNSEGHFEPIDVNDAVPQMSVLELLDHVNTGLI FT EEGKEPFVFASDCREGICGTCGLLVNGRPHGLDKNKPSCQQRLDHVPDGSTLKIEPLRS FT AAYPVVKDLLVDRSALDRVLEKGGFVSINAGTAPDADTLHQNHESAELALDHAACIGCG FT ACVAACPNGAAHLFTGAKLIHLSLMPLGKEERGKRARKMVDELETNFGHCSLYGECADV FT CPAGIPLSAVAAINKERARAFFRGKDD" FT misc_feature 341113..341139 FT /note="ScanRegExp hit to PS00197, 2Fe-2S ferredoxins, FT iron-sulfur binding region signature." FT misc_feature 341395..341466 FT /note="HMMPfam hit to PF00037, 4Fe-4S binding domain" FT misc_feature 341416..341451 FT /note="ScanRegExp hit to PS00198, 4Fe-4S ferredoxins, FT iron-sulfur binding region signature." FT misc_feature 341557..341628 FT /note="HMMPfam hit to PF00037, 4Fe-4S binding domain" FT CDS 341769..342119 FT /transl_table=11 FT /locus_tag="DIP0373" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48878.1" FT /translation="MSHSLDATQESGNYPVFEGRMHYIDGYDPSSLWAPHSSLQRTSTW FT VGMGAILAGLAGLGTLIFGLASSTVGSQEAWSTYALIGGVIAAVLLIGGFGLIHMGRAA FT YRQYRAETGRVN" FT misc_feature order(341898..341966,341994..342062) FT /note="2 probable transmembrane helices predicted for FT DIP0373 by TMHMM2.0" FT CDS 342204..342299 FT /transl_table=11 FT /locus_tag="DIP0374" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48879.1" FT /translation="MSNWNKIAWVLITVIAVIIGIRYIAMGLALI" FT misc_feature 342222..342290 FT /note="1 probable transmembrane helix predicted for DIP0374 FT by TMHMM2.0" FT CDS 342318..343586 FT /transl_table=11 FT /locus_tag="DIP0375" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis putative FT membrane protein Rv0473 or MTV038.17 TR:O53758 FT (EMBL:AL021933) (456 aa) fasta scores: E(): 2.5e-69, 44.47% FT id in 416 aa" FT /protein_id="CAE48880.1" FT /translation="MGTHSAELDRRRTLRNHKAFATGLLLVAAVIFLSCQWYTAHTDPT FT PVWVGFVRAAAEAGMVGGLADWFAVTALFRYPLGLKIPHTALVRNKKDQVGESLSSFVS FT ENFLNPTLITQKVRQAQVPTVLADWLVQPDNAKRVSQEAGTFVAKVVRALDPQDAETVI FT NAALLDKLAQPEWGPHVGKTLQQLIDEGLTDPIVDQLAGWMHKKATTSEALIIRILDER FT APSWAPRFINDIVGERVYRELVQWTAAVDRDKNHEARHAIRRFLEKFAVDLQEDPVMIQ FT KVEEIKHDIMGSGPVRNAAASIWASTSSAILAAVADPESIIRTKIAEYAMAWGERIHND FT EQIRTQLDRRITGAAEFLAENYADQITSIIGETIERWDADEASDKIELMVGKDLQYIRL FT NGTVVGALAGLAIYTVSYLLFGL" FT misc_feature order(342375..342434,342477..342545,343512..343580) FT /note="3 probable transmembrane helices predicted for FT DIP0375 by TMHMM2.0" FT CDS 343599..343874 FT /transl_table=11 FT /locus_tag="DIP0376" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein 2SCD46.14 TR:Q9FCG9 (EMBL:AL391406) (113 aa) fasta FT scores: E(): 0.0064, 32.14% id in 84 aa" FT /protein_id="CAE48881.1" FT /translation="MISFGILTILYWPIAVCGVVGAVLVAATRADAFEAADRQNKWVWT FT ALLGGSALALFSGFPFLSWIGIVIIGLYWFDVRPQITNILNGNYGW" FT misc_feature 343599..343694 FT /note="Signal peptide predicted for DIP0376 by SignalP 2.0 FT HMM (Signal peptide probability 0.982) with cleavage site FT probability 0.611 between residues 32 and 33" FT misc_feature order(343611..343679,343722..343823) FT /note="2 probable transmembrane helices predicted for FT DIP0376 by TMHMM2.0" FT CDS 343881..344369 FT /transl_table=11 FT /locus_tag="DIP0377" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48882.1" FT /translation="MIPIVSGPEASVDKARELAAGGEGVCVPPTLLTALGQVPGPVVSW FT AGYPTGQHHSLIKASEARLAVQCGAGMVLVVPDPAAVVAGTSTALITELVTTREAVPHP FT ASLALVLDTDLFAADVIARTAEHAQAAGFDAVVVKKETPQLALPTYVWDEANAGLLVR" FT CDS complement(344366..345109) FT /transl_table=11 FT /locus_tag="DIP0378" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE48883.1" FT /translation="MADVTTTKGSRVGKVSLIIALIVVILLVVAEFGLRAMMSQQLKES FT TSPEASISFGASPLLVGIATKNLPSVTIDTPEMGESPRSHITMKNLDIHNSDAPIAEQL FT KLETTLSDAYLLAAMQNGLAENTAPKPAAGELDLGSLLQSIVKVTAVTTQPAEKTITIE FT FTNGAASLQLKPVVDNGSLGFEAVNANLLGFDLPQSVSDALTQQLSKQAGDSLHNMTIS FT NVDVIEGGMNLTLNGNNVNLAELEN" FT misc_feature complement(345008..345073) FT /note="1 probable transmembrane helix predicted for DIP0378 FT by TMHMM2.0" FT CDS complement(345115..345990) FT /transl_table=11 FT /locus_tag="DIP0379" FT /product="Putative oxidoreductase" FT /note="Similar to Clostridium pasteurianum pyruvate FT formate-lyase ativating enzyme Act SW:PFLA_CLOPA (Q46267) FT (238 aa) fasta scores: E(): 1.4e-32, 44.24% id in 226 aa, FT and to Escherichia coli pyruvate formate-lyase 1 activating FT enzyme PflA or Act or B0902 or Z1246 or ECS0985 FT SW:PFLA_ECOLI (P09374) (245 aa) fasta scores: E(): 1.1e-31, FT 38.68% id in 243 aa" FT /protein_id="CAE48884.1" FT /translation="MADGINSTVTVERSDGPRHRGTAAGIGGLDLDLEDVTHKELIEAR FT RTGDVGLVHSWELVTAVDGPGTRMTMFMSGCPLRCLYCHNPDTMGMKEGTVERVESIVK FT KIKRYRNVFKASGGGLTISGGEPLFQIAFTRRVLKEVHDAGIHTTIDTSGYLGARLTDE FT DLENIDLVLLDVKSGDEETYHRVSGGRELQPTIDFGNRLNAIGKPVWIRFVLVPGVSDA FT PENINNVADIVAQWKDNVERVEVLPFHNMGADKWHELGLNYELEDTKPPTQESVEFAKE FT TFRSRGLTVY" FT misc_feature complement(345727..345837) FT /note="BlastProDom hit to PD004758, PD004758" FT misc_feature complement(345736..345753) FT /note="ScanRegExp hit to PS00190, Cytochrome c family FT heme-binding site signature." FT misc_feature complement(345736..345801) FT /note="ScanRegExp hit to PS01087, Radical activating FT enzymes signature." FT misc_feature complement(345739..345834) FT /note="HMMPfam hit to PF02143, Radical activating enzyme" FT CDS complement(join(346069..346251,346373..348466)) FT /pseudo FT /transl_table=11 FT /gene="pflB" FT /gene_synonym="pfl" FT /locus_tag="DIP0380" FT /product="formate acetyltransferase 1 (pseudogene)" FT /note="Pseudogene. Similar to Escherichia coli formate FT acetyltransferase 1 PflB or Pfl or B0903 SW:PFLB_ECOLI FT (P09373) (759 aa) fasta scores: E(): 1.5e-171, 57.65% id in FT 758 aa. Presents a frameshift at residue 698" FT /db_xref="PSEUDO:CAE48885.1" FT misc_feature complement(346138..346164) FT /note="ScanRegExp hit to PS00850, Glycine radical FT signature." FT misc_feature complement(346379..346411) FT /note="ScanRegExp hit to PS00136, Serine proteases, FT subtilase family, aspartic acid active site." FT misc_feature complement(346628..348436) FT /note="HMMPfam hit to PF02901, Pyruvate formate lyase" FT CDS complement(348818..349630) FT /transl_table=11 FT /locus_tag="DIP0382" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 29.8 FT kDa protein 2SCD46.17c TR:Q9FCG6 (EMBL:AL391406) (271 aa) FT fasta scores: E(): 3e-26, 47.92% id in 265 aa" FT /protein_id="CAE48886.1" FT /translation="MADHAHNLRATFGHGRPIGVITRGTTGFNRLRRCDRWMAHHPLIQ FT QALRRTSDPIALDVGYGASFTTTVEWARWLRTMRDDVRVTGLEIDPERVLPPRDGVTFE FT LGGFELAGYQPTLVRAFNVLRQYDVDQVMDAWEMVTSRLQPGGFFVEGTCDELGRRSTW FT VLLNHAGPQSLTLCWDPFDVERPSDIAERLPKILIHRNVAGEKIHDVLLRTDEAWDRCA FT PWASYGPRVRWRAARAMLMDMGIPMSIIRRPVRDNQLTVPWSIVDPTT" FT CDS complement(349646..350107) FT /transl_table=11 FT /locus_tag="DIP0383" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Mycobacterium tuberculosis FT hypothetical 19.1 kDa protein Rv0481c or MT0499 or FT MTCY20G9.07c SW:Y481_MYCTU (Q11147) (174 aa) fasta scores: FT E(): 0.028, 23.92% id in 163 aa" FT /protein_id="CAE48887.1" FT /translation="MEKVHAALTNPAYWDFIVKNLSPEPGEVHEFTEANGGAVATLFEV FT LPQELLPEAIRAMISQALKVKRVVTVGGLNGTSAPLSYTADVKGTPVDFKGEISMNGLG FT NTTTLSYANEITVNIPLMGAAIEPKVGQALADLFQNEGDLTSKWISKNL" FT CDS 350143..351276 FT /transl_table=11 FT /locus_tag="DIP0384" FT /product="Putative peptidoglycan synthesis related protein" FT /note="Similar to Mycobacterium tuberculosis FT UDP-N-acetylenolpyruvoylglucosamine reductase MurB or FT Rv0482 or MT0500 or MTCY20G9.08 SW:MURB_MYCTU (Q11148) (369 FT aa) fasta scores: E(): 1.7e-39, 51.27% id in 353 aa, and to FT Escherichia coli UDP-N-acetylenolpyruvoylglucosamine FT reductase MurB or B3972 SW:MURB_ECOLI (P08373) (342 aa) FT fasta scores: E(): 3.1e-14, 31.69% id in 325 aa" FT /protein_id="CAE48888.1" FT /translation="MSCIQTTFNEVLEKSLNHILDGIRPQIEAIDDAAFVAVTFAELTT FT LHLGGTPMAAVRCRSQHSVVEVVRLLDAHQIPLLIVGGGSNLVIADGEIPLVAVILDCD FT DISVTLDTGRVVAEAGAVWDDVVRLCVDAGLGGIECLSGIPGSAGATPVQNVGAYGAEI FT SDVLVSVTLLERATGAVMEVPAADLELAYRYSNLKFTGRGVVLGITLQLHTDGMSAPLR FT FGELARVLGHEGPHPAVQVREAVLGLRAGKGMVYNEADHDTWSAGSFFTNPIVPESVGD FT HVRSVVGDESMPCFAAGEGMVKLSAAWLIDRAGFAKGHQGPGGRVSLSTKHTLALTNRG FT NATTDDLVALAREVRGGVMDAFGVLLEPEPVWVGVSI" FT misc_feature 350254..350784 FT /note="HMMPfam hit to PF02215, FT UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding FT domain" FT misc_feature 350854..351264 FT /note="HMMPfam hit to PF02873, FT UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal FT domain" FT CDS complement(351273..351638) FT /transl_table=11 FT /locus_tag="DIP0385" FT /product="Conserved hypothetical protein" FT /note="Similar to Bacillus subtilis YjqA protein TR:O34593 FT (EMBL:Z99110) (125 aa) fasta scores: E(): 5e-11, 35.51% id FT in 107 aa" FT /protein_id="CAE48889.1" FT /translation="METASITEWTFVQEVPIPEDVANLMVPGEDAVVAFKTFRDSAIFT FT TKRLIVRDSQGLRGKKVEVYSLPYSSVNMWSTENAGTFDFNAEVELWTRAGKIKIKIGR FT DLDVRRLDMLLAQCILG" FT misc_feature complement(351276..351287) FT /note="ScanRegExp hit to PS00294, Prenyl group binding site FT (CAAX box)." FT CDS complement(351641..353347) FT /transl_table=11 FT /locus_tag="DIP0386" FT /product="Putative ligase" FT /note="Similar to Escherichia coli FT long-chain-fatty-acid--CoA ligase FadD or OldD or B1805 FT SW:LCFA_ECOLI (P29212) (561 aa) fasta scores: E(): 7.5e-62, FT 34.46% id in 560 aa. Possible duplication of the downstream FT CDS: Similar to DIP0387 (566 aa) fasta scores: E(): FT 1.2e-164, 73.488% identity in 562 aa overlap" FT /protein_id="CAE48890.1" FT /translation="MGAFDDKAWLQHYGDWTPASLDYGDTTLVDIYDNNLAVNADKPAT FT YFFGRTQTYAELDAQVRAAAAGLKAFGIRPGDRVAIVLPNCPQHIAAFYAIQLLGATVV FT EHNPLYTAHELEGLFQDHGARVAIAWDKAASTLEKLRDTTSLETIISVNMTEAMPRIQQ FT LALRIPIPPIAAKREQLTAFADNTVPWSTLIGNAIGGNGKRTEFPKVTKDDIALILYTS FT GTTGTPKGALLSHGNLVSNCFMGKAWVPGLGDQPERFLAALPMFHAYGMTMVGTLGVFV FT GAEMVLLPAPQIPLIMKIMKNHTPTWLPGVPTLYEKIVAEATAKGVEIKGIRNSFSGAS FT TLPVRTVEDWENLTGGLLVEGYGLTETSPVLCGNPMNGNRRPGYIGVPFPDTEIRIANP FT DNLDETMPDGEAGEVLARGPQIFQGYLNKPEATAATFHGDWFRTGDMGVMEEDGFIRLV FT SRIKEIIITGGFNVYPAEVEEALIAHPDVDDAAVVGRPRKDGSEDVVACIVLKDGAALD FT PEGLKTHCRKLLTRYKVPRTFYHFEALNKDQLGKVRRREVQQTLLERLGEK" FT misc_feature complement(351872..353191) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT misc_feature complement(352649..352675) FT /note="FPrintScan hit to PR00154, AMP-binding signature" FT misc_feature complement(352661..352696) FT /note="ScanRegExp hit to PS00455, Putative AMP-binding FT domain signature." FT misc_feature complement(352676..352711) FT /note="FPrintScan hit to PR00154, AMP-binding signature" FT CDS complement(353409..355109) FT /transl_table=11 FT /locus_tag="DIP0387" FT /product="Putative ligase" FT /note="Similar to Escherichia coli FT long-chain-fatty-acid--CoA ligase FadD or OldD or B1805 FT SW:LCFA_ECOLI (P29212) (561 aa) fasta scores: E(): 7.8e-63, FT 34.69% id in 565 aa. Possible duplication of the upstream FT CDS: Similar to DIP0386 (568 aa) fasta scores: E(): FT 1.2e-164, 73.488% identity in 562 aa overlap" FT /protein_id="CAE48891.1" FT /translation="MSAYETKKWLHYYPDWTPHSLDYGDTTLLDVYSNNLALNKDKPAT FT YFFGRQTSYGDLDKQVRTAAAGLRALGVRSGDRVAIALPNCPQHIVAYWAVLMLGATVV FT EHNPLYTAHELESPFQDHGARVAIVWDKAADTLEKLRRNTPLETIVSVNMMTAMPAVQQ FT ALLRLPIPMIRKKRDALTASAPNTIPWEILVGSALGGNGDDIVPCPEVTKKSIALILYT FT SGTTGTPKGAQLSHGNLFANIMQGKAWVKGIGDQDERLLAALPMFHAYGVTIVLNLAFY FT VGGELVLLPAPQIPLIMKIMKKHTPTWVPGVPTLYQKIVEAAERDGISISGVRNSFSGA FT SSLPVETVARWEALTGGLLVEGYGLTETSPIIVGNPMTTDRRPGYVGVPFPDTEIRIAN FT PDNLDETMPDGQEGEVLVRGPQVFSGYLNNPEATAKSFHGQWYRTGDVGIMEEDGFIRL FT VARIKEVIITGGFNVYPAEVEEVLRNHPDITDATVVGLPRGDGSESVVAAITLAAGAAL FT DPEGLKAYCRENLTRYKVPRTFYHFEELPKDQLGKVRRKDVQEALASKK" FT misc_feature complement(353631..354953) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT misc_feature complement(354420..354455) FT /note="ScanRegExp hit to PS00455, Putative AMP-binding FT domain signature." FT CDS 355193..356476 FT /transl_table=11 FT /locus_tag="DIP0388" FT /product="Putative glycosyl transferase" FT /note="Similar to Streptomyces coelicolor putative glycosyl FT transferase GlgA TR:Q9X9U5 (EMBL:AJ243803) (387 aa) fasta FT scores: E(): 3.5e-19, 29.88% id in 415 aa and to FT Mycobacterium leprae hypothetical 45.3 kDa protein ML2443 FT or U2168f or B2168_c2_201 SW:Y486_MYCLE (P54138) (428 aa) FT fasta scores: E(): 1.3e-73, 52.23% id in 402 aa" FT /protein_id="CAE48892.1" FT /translation="MMTMRIAMISIHTSPLQQPGSGDAGGMNVYIISIARELARRGVDV FT DIYTRATRPSQGDVVEVESGLRVINIVAGPYEGLSKEELPTQLAAFAGGVVQFAKCHHM FT RYDVIHSHYWLSGQVGWLLRDLWNIPLVHTAHTLAAVKNAHRSAGDTEESEARRICEQQ FT LVDNADILVVNTPEETNDLVRHYDANPDSVAVIAPGANVELFTPGTQRNTEQSRRCLGI FT PLHTKVMAFVGRLQQFKGPEVLLRAVAEMLERDPDRDMRVIMCGGPSGAAATVEHYIEL FT TRSLGIAHRVRFLDPRPPEELVSVYQAADVVAVPSYNESFGLVAMEAQASGTPVVAARV FT GGLPIAVVDGETGVLVDGHDPIMWADALEQLLDDDPTRQQMGVAAVEHAANFTWAAAAE FT KLESVYGDAAMLDVAQCHDRYAAGSDRA" FT misc_feature 355826..356356 FT /note="HMMPfam hit to PF00534, Glycosyl transferases group FT 1" FT CDS 356496..357281 FT /transl_table=11 FT /gene="gpmA" FT /gene_synonym="gpm" FT /locus_tag="DIP0389" FT /product="phosphoglycerate mutase 1" FT /EC_number="5.4.2.1" FT /note="Similar to Escherichia coli phosphoglycerate mutase FT 1 GpmA or Gpm or B0755 or Z0925 or ECS0783 SW:PMG1_ECOLI FT (P31217) (249 aa) fasta scores: E(): 3.7e-50, 56.5% id in FT 246 aa" FT /protein_id="CAE48893.1" FT /translation="MLALLRFVANLTSMTTGKLILLRHGQSEWNASNQFTGWVDVNLTE FT KGEAEAKRGGELLKAQGVLPSVVYTSLLRRAIRTANIALNAADRHWIPVVRDWRLNERH FT YGALQGLNKAETKEKYGDEQFMAWRRSYGTPPPELEDSSEFSQANDPRYANLDVVPRTE FT CLKDVVERFVPYFKEEILPRVKNGETVLIAAHGNSLRALVKHLDNISDADIAELNIPTG FT IPLVYELDEAGTVLNPGGTYLDPEAAAAGAAAVAAQGAK" FT misc_feature 356544..357212 FT /note="HMMPfam hit to PF00300, Phosphoglycerate mutase FT family" FT misc_feature 356556..356585 FT /note="ScanRegExp hit to PS00175, Phosphoglycerate mutase FT family phosphohistidine signature." FT CDS 357293..358447 FT /transl_table=11 FT /locus_tag="DIP0390" FT /product="Putative two component system sensor kinase" FT /note="Similar to Mycobacterium tuberculosis sensor-like FT histidine kinase SenX3 or Rv0490 or MT0509 or MTCY20G9.16 FT SW:SEX3_MYCTU (Q11155) (410 aa) fasta scores: E(): 3.6e-60, FT 48.84% id in 389 aa" FT /protein_id="CAE48894.1" FT /translation="MYVVIAFVLGVVLSGLALPALKWVRGRSYRTAKKGDNKVTTVSQM FT LHLTVQGSPTGMAVIDATGAVLLSNVRSHEMGIVHERTLNPDIWELAQEAYKDQETHAI FT ELVIDERRNRITSVRAVVKPLTLVDNRYVVIYSTDESENQRMEAARRDFVANVSHELKT FT PVGGMALLAEAITEASDDQEQVEYFGNRLYKEAHRLADMINELISLSKLQGAEALPDLE FT PVSVDRVIDEALARNVLAADNAGIELNRGKPCNAMVMGDMTLLVTAVSNLISNAINYSP FT QGMPISVATKISRDGRVLIRVIDNGIGISVENQKRVFERFFRVDKARSRSTGGTGLGLA FT IVKHVAANHGGDVTLWSRPGTGSTFTIELPIYHETDTGRRKDKN" FT misc_feature 357296..357364 FT /note="1 probable transmembrane helix predicted for DIP0390 FT by TMHMM2.0" FT misc_feature 357737..357937 FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain" FT /note="HMMSmart hit to SM00388, His Kinase A FT (phosphoacceptor) domain" FT misc_feature 357758..358411 FT /note="ProfileScan hit to PS50109, Bacterial histidine FT kinase domain." FT misc_feature 358070..358411 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature 358184..358228 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 358238..358270 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 358289..358345 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 358361..358402 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT CDS 358447..359127 FT /transl_table=11 FT /gene="regX3" FT /locus_tag="DIP0391" FT /product="Putative two component system response regulator" FT /note="Similar to Mycobacterium tuberculosis sensory FT transduction protein RegX3 or Rv0491 or MT0510 or FT MTCY20G9.17 SW:RGX3_MYCTU (Q11156) (227 aa) fasta scores: FT E(): 4e-68, 80.97% id in 226 aa" FT /protein_id="CAE48895.1" FT /translation="MTSILLVEDEESLADPLAFLLRKEGFDVVIAGDGPSALVEFDRNA FT IDIVLLDLMLPGMSGTDVCKRLRAVSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYS FT SRELIARIRAVLRRGGETIEESDEILGSGRIHMDVERHTVTVDGEEISMPLKEFDLLEY FT LMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHIKRLRSKIEPEPSAPCHVITVRGLGY FT KYED" FT misc_feature 358450..358782 FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT misc_feature 358450..358806 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature 358453..358794 FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature 358891..359109 FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal" FT CDS complement(359090..359959) FT /transl_table=11 FT /locus_tag="DIP0392" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 32.9 kDa protein Rv0495c or MT0515 or MTCY20G9.21c FT SW:Y495_MYCTU (Q11160) (296 aa) fasta scores: E(): 3.6e-25, FT 44.07% id in 270 aa" FT /protein_id="CAE48896.1" FT /translation="MKYLGFPAMSPAAASIRRGDELPPDFPRQWYEFTNPEDPLHQFSI FT DLTWLESSYRCAFGTSACHGIDTAQPTVGCCVHGAFLSDEEDRDQLYAAVDKMPAHYWE FT LRPAGVDAYLADPDPTQIEPWLVWDELDDEEGNPEPALKTTLVDGACIFANRKNPGCAI FT HQWALDAGEDLTVVKPEVCWQLPLRRLEAYEDRADGVEILRTTITEYDRRGWGNGGEDF FT DWYCTTDPHCHTSDKPMWITHEAELRALMGDASYEVLAQHCAARQKAGIPLAPHPASLR FT TCSPDRAQ" FT CDS 360212..360835 FT /transl_table=11 FT /locus_tag="DIP0393" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48897.1" FT /translation="MSEKQLTVAELLARSGKAEATSETPRRRRRNLEEGGVSVAELTGN FT IPKVKAKPAEPKHSNEPIDTPSTEETIVLSVVDEDDPVRLTTDSFPAVQTEVPAAELEE FT EPEEVVEEEVADEEEFWEDDEPVSVASVVGLALVGIIVGVGIFLGFGYLWDNYSRKVVG FT LLALAVIAAMITVAHVLRTESDRRSMMLAGCAGVAVTFVPMLVS" FT misc_feature order(360605..360673,360692..360748,360776..360829) FT /note="3 probable transmembrane helices predicted for FT DIP0393 by TMHMM2.0" FT CDS 360869..361681 FT /transl_table=11 FT /gene="proC" FT /locus_tag="DIP0394" FT /product="pyrroline-5-carboxylate reductase" FT /EC_number="1.5.1.2" FT /note="Similar to Corynebacterium glutamicum FT pyrroline-5-carboxylate reductase ProC SW:PROC_CORGL FT (P46540) (270 aa) fasta scores: E(): 6e-57, 61.19% id in FT 268 aa" FT /protein_id="CAE48898.1" FT /translation="MFAMTSIAVIGGGKIGEALISGLVASGMSPKDIHVTNRNAERAQE FT LKERYGVLTFLENIAAVDDVDMVFLCVKPQQVIPVVEEIADVVDNNTSTTIVSMAAGVT FT NAMIEESLAAGSPVIRVMPNTPMLVGKGMSVVAPGRYADEDTVASLTQLLEAVGSVEVI FT EESSMDAVVALSGSSPAYLFLMVEALIDAGVFLGLPRDKAKNLAVSSFAGAATMLEQTG FT EEPAVLRANVSSPGGTTIAAIREFEESGLRAAVYRAATAAATRNSSLG" FT misc_feature 360881..361630 FT /note="HMMPfam hit to PF01089, Delta FT 1-pyrroline-5-carboxylate reductase" FT misc_feature 361541..361609 FT /note="ScanRegExp hit to PS00521, Delta FT 1-pyrroline-5-carboxylate reductase signature." FT CDS 361938..362129 FT /transl_table=11 FT /locus_tag="DIP0395" FT /product="Putative DNA-binding (excisionase) protein" FT /note="Similar to Mycobacterium leprae B2168_C1_172 ML2429 FT TR:Q49828 (EMBL:U00018) (86 aa) fasta scores: E(): 7.6e-16, FT 80% id in 55 aa" FT /protein_id="CAE48899.1" FT /translation="MAREDNGSFLTVAEVAEIMRVSKMTVYRLVHSGELPAVRVGRSFR FT VHEKAVNEYLDSSYYNVG" FT misc_feature 361965..362030 FT /note="Predicted helix-turn-helix motif with score 1715 FT (+5.03 SD) at aa 10-31, sequence LTVAEVAEIMRVSKMTVYRLVH" FT CDS 362191..362418 FT /transl_table=11 FT /locus_tag="DIP0396" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis and FT Mycobacterium leprae hypothetical 4.1 kDa protein FT Rv0500.1/ML2428.1 or Rv0500B or MT0521.1 or ML2428.1 or FT ML2428A SW:Y50A_MYCTU (Q9CB56) (33 aa) fasta scores: E(): FT 1.6e-08, 100% id in 33 aa" FT /protein_id="CAE48900.1" FT /translation="MLAFVSESSPNLRADVHFGRAKDRGASDREVRTPIYEARETVMGS FT VIKKRRKRMSKKKHRKLLRRTRVQRRKLGK" FT CDS 362497..363366 FT /transl_table=11 FT /locus_tag="DIP0397" FT /product="Putative secreted protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein SCBAC16H6.28 TR:CAC44607 (EMBL:AL596162) (270 aa) FT fasta scores: E(): 4.9e-22, 39.13% id in 207 aa" FT /protein_id="CAE48901.1" FT /translation="MYFMQKSARRSLIAILAIVVLIVVAGGAYMLGNKSAGTQAEKTAT FT DLPPGFSGKAGSANATPGTKGLDGPTPLADGSFDATIFGPAKELKSADDILNVHRRNAK FT DPFAVGAVDAPLVITEFSDFECPFCARWSNQTEPTLMEEYVSKGLVRIEWNDLPVNGEH FT ALAAAKAGRAAAAQGKFDEFRKALFEASRNVSGHPNNTLKDFERFARNAGVKDMERFSR FT EAQDSTYDEVLTKAADYAHGLGVSGTPAFVVGTQYISGAQPTEEFIKVIESELKKSPTF FT STPSSHQN" FT misc_feature 362497..362607 FT /note="Signal peptide predicted for DIP0397 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.211 between residues 37 and 38" FT CDS complement(363332..364375) FT /transl_table=11 FT /locus_tag="DIP0398" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 32.7 kDa protein Rv0505c or MT0526 or MTCY20G9.32c FT SW:Y505_MYCTU (Q11169) (308 aa) fasta scores: E(): 4.7e-52, FT 59.67% id in 243 aa" FT /protein_id="CAE48902.1" FT /translation="MSQSIPEPHWHQTPQEFLASWSTSRGNLRRFFEEHALPPIDARTQ FT REAGEAAAELAASELFGIKLDEYTSGLDSVSGSFEAAGAQHVTTANPEIPQDIGAAAFF FT DIDNTLIQGSSLVVFAMGLAKKKYFKLNEILPVAWKQIKFRVTGNENAHDVAEGRQQAL FT EFIKGRRVDELVALCEEIVDNNMSEKLWPGTKQLADQHIADGQQVWLVSATPVQLAQAL FT AKRLGFTGALGTVAEVKDGVFTGRLVGDILHGPGKLHAVAALATIERLDLSRCTAYSDS FT INDVPMLSMVGTAVAINPDRPLAKVAKQHGWAVRDYRSLRKAIRTFGIPALVTAAFSFG FT GWKAWRR" FT misc_feature complement(363473..364081) FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT CDS 364441..364683 FT /transl_table=11 FT /locus_tag="DIP0399" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 10.7 kDa protein Rv0508 or MT0529 or MTCY20G9.35 FT SW:Y508_MYCTU (Q11172) (97 aa) fasta scores: E(): 2.7e-08, FT 40.74% id in 81 aa" FT /protein_id="CAE48903.1" FT /translation="MDMHKVELMVRSTCGSCARVAAQIRPVVAAAGAELVIVDVDSDSA FT LASEFGDRVPVVVIDDEEFSCWEVDNEELAAELAQ" FT CDS 364800..366116 FT /transl_table=11 FT /locus_tag="DIP0400" FT /product="Putative glutamyl-tRNA reductase" FT /note="Similar to Mycobacterium tuberculosis glutamyl-tRNA FT reductase HemA or Rv0509 or MT0530 or MTCY20G9.36 FT SW:HEM1_MYCTU (Q11139) (468 aa) fasta scores: E(): 8.4e-47, FT 46.95% id in 443 aa, and to Escherichia coli glutamyl-tRNA FT reductase HemA or B1210 or Z1981 or ECS1715 SW:HEM1_ECOLI FT (P13580) (418 aa) fasta scores: E(): 2e-29, 28.63% id in FT 426 aa" FT /protein_id="CAE48904.1" FT /translation="MSVLVVGMSHRSAPVALLEKLSMDDGVRTNTVSDLVARPSLAEAM FT IVSTCNRLEVYAMTSSFHTGVNDVVEVLHDMSGVDMEELRGYLYVRYADAAAEHMMEVT FT SGLDSMVVGEQQIIGQVRTAYHSATEAGTVGPALHGLVQASLHTGKRVHTETDIDDAGA FT SMVSFACDEALAQMSATNFAGCRALVLGAGAMASLAATHLGRLGIEHITVANRTFERAQ FT RLADHAVEAGVAASAIEFERRMDVLCDVDVVVSATGANTFTIEAANIPAAHGDLMMIDL FT SLPRDISDDVAEVPGVHLVNIEKLRDVASSGEAKDHAAQRIVAEELEAYTSAQRIRDVA FT PAVAALRRHASSLIDSELARLSTRVPSMDEDDFSEVQRTVRRVVDKLLHQPTVRVKELA FT AQSGTVSYDTAIQELFGLAVEATPVAVNVDELPERINKR" FT misc_feature 364800..366053 FT /note="HMMPfam hit to PF00745, Glutamyl-tRNAGlu reductase" FT misc_feature 365094..365165 FT /note="ScanRegExp hit to PS00747, Glutamyl-tRNA reductase FT signature." FT CDS 366113..366997 FT /transl_table=11 FT /gene="hemC" FT /locus_tag="DIP0401" FT /product="Porphobilinogen deaminase" FT /EC_number="2.5.1.61" FT /note="Similar to Mycobacterium tuberculosis FT porphobilinogen deaminase HemC or Rv0510 or MT0531 or FT MTCY20G9.37 SW:HEM3_MYCTU (Q11173) (309 aa) fasta scores: FT E(): 4.9e-46, 52.38% id in 273 aa, and to Escherichia coli FT porphobilinogen deaminase HemC or PopE or B3805 FT SW:HEM3_ECOLI (P06983) (313 aa) fasta scores: E(): 3.3e-32, FT 40.06% id in 302 aa" FT /protein_id="CAE48905.1" FT /translation="MTLKIGTRGSLLATTQSGHVRDDLRPYEAELVIVTTHGDVNMAPV FT ERIGVGVFTQALREELHTGGCDIAVHSFKDLPTELDPRFHLVVPKRADFRDCLIARDGL FT SLADLPAGALIGTGAPRRISQIKALRPDVECVPLRGNIDTRMGKVTSGELDAVVLAYAG FT LTRVGRGDEATQVFDPQDFLPAPAQGALAVECRADDAYAREAIDSICDEQAQVCAVTER FT VVLNRLEAGCTAPVAAHATLNDGTLTLTAAVIALDGSKVVRRELSAPVAENVALAEELT FT RALIADGAATILG" FT misc_feature 366119..366970 FT /note="HMMPfam hit to PF01379, Porphobilinogen deaminase" FT misc_feature 366311..366370 FT /note="FPrintScan hit to PR00151, Porphobilinogen deaminase FT signature" FT misc_feature 366452..366505 FT /note="FPrintScan hit to PR00151, Porphobilinogen deaminase FT signature" FT misc_feature 366509..366562 FT /note="FPrintScan hit to PR00151, Porphobilinogen deaminase FT signature" FT misc_feature 366587..366634 FT /note="ScanRegExp hit to PS00453, FKBP-type peptidyl-prolyl FT cis-trans isomerase signature 1." FT misc_feature 366770..366823 FT /note="FPrintScan hit to PR00151, Porphobilinogen deaminase FT signature" FT misc_feature 366773..366823 FT /note="ScanRegExp hit to PS00533, Porphobilinogen deaminase FT cofactor-binding site." FT CDS 367058..368728 FT /transl_table=11 FT /locus_tag="DIP0402" FT /product="Putative uroporphyrin-III C-methyltransferase" FT /note="Similar to Mycobacterium leprae possible FT uroporphyrin-III C-methyltransferase HemD or ML2420 FT TR:Q9CB60 (EMBL:AL583925) (563 aa) fasta scores: E(): FT 9.3e-91, 52.81% id in 551 aa" FT /protein_id="CAE48906.1" FT /translation="MRLIMKPEHSTRGRVIFVGAGPGNPDLLTVRAREVLGSTANAVVD FT STVGVGIRAVIAEHLEVPQAKLDAAEAEYERMCAAAKRRKPPRPDAPTAAEITEVSADA FT SVDEVMAVLLPLLDEGDVIRLVQGNPLADSRALDEITAVTQVGADFQIVPGMSLPAAVP FT AFAGITLGDSYTKTTVSEDTNWDQLATAPLPLILQASKDDLLTIAMELKDRKLPASTPV FT TVTMNGTTRLQRSFDVTLKTMKSLVKQELDGTLVVTVGVSDRSTFSWWESRALFGWRVL FT VPRAKDQAGPMSSRIAAYGAIAQEVPTISVEPPRNPAQLERAIKGIVEGRYQWVVFTSV FT NAVKAVREKIVSFGLDSRAFAGVHIAAVGAKTAAAIREFGITPELIPPRKEHNAAGMVS FT VFPNYVEGLDPVGRVLLPRADIATDVLVDGLVNLGWEVDDVVAYRTVRAAPPSAEVRDM FT IKSGDFDAVCFTSASTVRNLVGIAGKPHARTIIACIGPMTAAEAEKQGLRVDVIPEVAN FT VAALVDALAEHVEKLRAAGELPPPRKKRRARRKSKEGAV" FT misc_feature 367097..367789 FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT misc_feature 367109..367153 FT /note="ScanRegExp hit to PS00839, Uroporphyrin-III FT C-methyltransferase signature 1." FT misc_feature 367916..368629 FT /note="HMMPfam hit to PF02602, Uroporphyrinogen-III FT synthase HemD" FT CDS 368725..369717 FT /transl_table=11 FT /gene="hemB" FT /locus_tag="DIP0403" FT /product="delta-aminolevulinic acid dehydratase" FT /EC_number="4.2.1.24" FT /note="Similar to Streptomyces coelicolor FT delta-aminolevulinic acid dehydratase HemB or SCE68.09c FT SW:HEM2_STRCO (P54919) (330 aa) fasta scores: E(): 4.2e-76, FT 62.84% id in 323 aa, and to Escherichia coli FT delta-aminolevulinic acid dehydratase HemB or Ncf or B0369 FT SW:HEM2_ECOLI (P15002) (323 aa) fasta scores: E(): 3.6e-57, FT 50% id in 326 aa" FT /protein_id="CAE48907.1" FT /translation="MNLDLIRRPRRLRSTPVMREFVAETTLRPADLILPMFIADGIDKP FT REIESMPGVYQHTMESLIEAVREAISVGIRCVDLFGVPLDSDKDATGSQAWDPEGILNR FT GVRALRQEFGDQVLIMADTCLDEFTDHGHCGILTTDRFGATIVDNDPTVELYQKMAVAQ FT AEAGAHIVSPSGMMDGQILAIREALDAAGFHDVAIMAYSAKYASAFYGPFRDAVGSSLQ FT GDRRAYQQDPANLRESILEVDLDIEEGADFVMVKPAMPYLDVLAEVASTSSVPVAAYQV FT SGEYAMLHAAAANGWLDLDRVMMESLISIKRAGADQILTYFAVEAARKL" FT misc_feature 368731..369714 FT /note="HMMPfam hit to PF00490, Delta-aminolevulinic acid FT dehydratase" FT misc_feature 368776..369693 FT /note="BlastProDom hit to PD002304, PD002304" FT misc_feature 369097..369141 FT /note="FPrintScan hit to PR00144, Delta-aminolevulinic acid FT dehydratase signature" FT misc_feature 369202..369261 FT /note="FPrintScan hit to PR00144, Delta-aminolevulinic acid FT dehydratase signature" FT misc_feature 369316..369375 FT /note="FPrintScan hit to PR00144, Delta-aminolevulinic acid FT dehydratase signature" FT misc_feature 369469..369507 FT /note="ScanRegExp hit to PS00169, Delta-aminolevulinic acid FT dehydratase active site." FT misc_feature 369469..369519 FT /note="FPrintScan hit to PR00144, Delta-aminolevulinic acid FT dehydratase signature" FT misc_feature 369544..369591 FT /note="FPrintScan hit to PR00144, Delta-aminolevulinic acid FT dehydratase signature" FT misc_feature 369634..369693 FT /note="FPrintScan hit to PR00144, Delta-aminolevulinic acid FT dehydratase signature" FT CDS complement(369844..370155) FT /transl_table=11 FT /locus_tag="DIP0404" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48908.1" FT /translation="MIAATPQAMDKQPSAKNQPCGIDKEVGTIANTVITLMPKYIDTNV FT IVLRHSCANRPPWRNAATNHANNPRNPSKNSTDITTPIDAAISGTACPFIRFSNSAIN" FT CDS 370197..372722 FT /transl_table=11 FT /locus_tag="DIP0405" FT /product="Putative cation transport protein" FT /note="Similar to Mycobacterium tuberculosis probable FT cation-transporting ATPase V CtpV or Rv0969 or MT0997 or FT MTCY10D7.05c SW:CTPV_MYCTU (P77894) (770 aa) fasta scores: FT E(): 4.5e-29, 27.6% id in 797 aa" FT /protein_id="CAE48909.1" FT /translation="MWSVTDSPLDDAIQEAKSAAQKAGFDTETFAAVQSKEGRTSFAFE FT LEGLGSASSVSELEEAIEQIEGVDAKIVYPSAMAWISASRTLDPTLIVDAFQQHGVTAT FT LTDSSLRRRLAWTDVEEGRYRRARARRFGSRVDEESRRFEIARREGFLHKRDETTRVVE FT TTEVLFTARSLMTKARLFTSIACTIPVLAVSFWRELQFDYWQWALAALSLPVVLYGAWP FT FHRATIGGARRGMSALDSASSVAILMAWGWSIVMMLFSSVGDPTYRAQPKWIAIDPTKF FT VSGALFFDVACGMTVILLAGRILVRRARSDLLEDLKRYRPNPSSTVTVVGKNRKTGEVR FT KEEVAIQKLNVGDDILIAPYALIPADGYVVGGASTIDGTALGIGRLKVKVNDHVYAGCV FT NGSNPLKIRVLQTGHRTWFAGITRWVSQASVHQNHADAVATRAASMLVPVSFVIAATDF FT ALWALITNNLNQAFATALAVLGCVSPVALATSASLAMRKSIEDAARQGVLIQSGETLRV FT IDTVDTVIFNRVGALSKAGMSVEKVTADRGENPDLVLRVAGALAMESDHPVSRALVRAA FT REARDASTDDSIPGWIDVTHSEIDEEGSFRGFVELPVGEEARSVEAVLWRPRSLSALDG FT RLAAAAESGSSPLVVRWKNKDRGVITLFNAVKDDAVDAVDDLEAQGIETMMLSRDTYPV FT ARRYGDSVGVSHVLAGIQPGQKPQTVRSVRNHGATIAVVGDDSINDCFRVANVGILIDA FT MSKSSAAIEHPVANVIMLKNDVAPIPRLFTFARRLNRRIRSNLGFAWVYNVAAIVAAIS FT GVLHPMIASLFMLGATIVIEVRSTWTRNL" FT misc_feature 370527..370640 FT /note="ProfileScan hit to PS50323, Arginine-rich region." FT misc_feature order(370731..370784,370812..370880,370917..370985, FT 371043..371111,371523..371591,371619..371678, FT 372582..372650) FT /note="7 probable transmembrane helices predicted for FT DIP0405 by TMHMM2.0" FT misc_feature 370824..370892 FT /note="FPrintScan hit to PR00940, Cation-transporting FT P-type ATPase A signature" FT misc_feature 370917..370973 FT /note="FPrintScan hit to PR00940, Cation-transporting FT P-type ATPase A signature" FT misc_feature 371376..371747 FT /note="HMMPfam hit to PF00122, E1-E2 ATPase" FT misc_feature 371403..371465 FT /note="FPrintScan hit to PR00940, Cation-transporting FT P-type ATPase A signature" FT misc_feature 371757..372467 FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT CDS complement(372700..373818) FT /transl_table=11 FT /locus_tag="DIP0406" FT /product="Putative membrane protein" FT /note="Low similarity to Bacillus halodurans BH0756 protein FT TR:Q9KEU3 (EMBL:AP001509) (410 aa) fasta scores: E(): FT 1.4e-07, 23.95% id in 405 aa" FT /protein_id="CAE48910.1" FT /translation="MDQKRPRMMAPDVARGLALLGIAMANIPSAWMGVGIFGQVNSTLD FT KTAVLFSAMFVHNRGLPMFSTLLGFGVGLITISMIRKHFSLSQARGALIKRYLFLTMFG FT VIHCLLLFFGDIMTFYGLAAVIIATMLPLKDTTIRLIAYILFGLTGIFAALLMAFPTAA FT QILTSDAGMASDTALEYYGTNIAVLISSLVMFPLQAMLYLPIMLIGYSWARRGVLADVH FT QHRTELYIWSGIAIAIIIGIGIPWGLTQSHTLTVLNFSIGQLSGPGILAICALSVDKIK FT PSWLTPFAALGKRSMSGYLMQSILCYPLFLGFTLGIKASAAGILGYAFGIWLITLLLAC FT LLEKKNLRGPFEWLHRRLSYGPTLQLTNSSST" FT misc_feature complement(order(372790..372855,372868..372924, FT 372988..373053,373069..373134,373198..373263, FT 373333..373398,373420..373470,373483..373539, FT 373579..373635,373714..373779)) FT /note="10 probable transmembrane helices predicted for FT DIP0406 by TMHMM2.0" FT misc_feature complement(373531..373614) FT /note="ScanRegExp hit to PS00622, Bacterial regulatory FT proteins, luxR family signature." FT CDS 373884..374918 FT /transl_table=11 FT /gene="hemE" FT /locus_tag="DIP0407" FT /product="uroporphyrinogen decarboxylase" FT /EC_number="4.1.1.37" FT /note="Similar to Streptomyces coelicolor uroporphyrinogen FT decarboxylase HemE or SC1C3.19 SW:DCUP_STRCO (O69861) (355 FT aa) fasta scores: E(): 5.2e-72, 59.69% id in 330 aa, and to FT Escherichia coli uroporphyrinogen decarboxylase HemE or FT B3997 SW:DCUP_ECOLI (P29680) (354 aa) fasta scores: E(): FT 1.2e-43, 41.14% id in 333 aa" FT /protein_id="CAE48911.1" FT /translation="MVSMPNPILDAAAGVTPHRRPVWFMRQAGRSLPEYREIREGVSML FT DSCFRPDMLAEITLQPVRRHDVDAAILFSDIVVPLKAAGVRVEIVPGRGPVMDHPLLTR FT QDIENLPILDHDVHEVAEGIGIIREELNDAQTLIGFAGAPFTLASYLVEGGPSKNHEKT FT KSLMHQDPESWHLLMRRLVPTIVQFLRTQIDAGVQAMQLFDSWAGFLSERDYREFVLPY FT SMEILAQVGDVPRIHFGVGTGELLTAMSEAGSEVVGVDWRVPLDVAAQRMVSPKVLQGN FT LDPAILFAGEDVMRREIARICAEADRAIAAGHATGHIFNLGHGVLPNTDPDAITRAVEI FT IHTF" FT misc_feature 373893..374915 FT /note="HMMPfam hit to PF01208, Uroporphyrinogen FT decarboxylase (URO-D)" FT misc_feature 373944..373973 FT /note="ScanRegExp hit to PS00906, Uroporphyrinogen FT decarboxylase signature 1." FT misc_feature 374295..374345 FT /note="ScanRegExp hit to PS00907, Uroporphyrinogen FT decarboxylase signature 2." FT CDS 374934..376286 FT /transl_table=11 FT /gene="hemG" FT /locus_tag="DIP0408" FT /product="protoporphyrinogen oxidase" FT /EC_number="1.3.3.4" FT /note="Similar to Bacillus subtilis protoporphyrinogen FT oxidase HemY or HemG SWALL:PPOX_BACSU (SWALL:P32397) (470 FT aa) fasta scores: E(): 5.9e-26, 28.75% id in 466 aaand to FT Mycobacterium leprae protoporphyrinogen oxidase HemY or FT ML1044 SW:PPOX_MYCLE (Q50008) (451 aa) fasta scores: E(): FT 9.3e-37, 37.82% id in 460 aa" FT /protein_id="CAE48912.1" FT /translation="MRIAIIGAGLAGLTAAYRLRDHDVSVFEATDRIGGKLHTVAFQSG FT PTDMGAEAYLAFREDTTAFFKELGLEVVSPSGLPSLLYVNGELHPMPMNTVMGIPGSSK FT GLEKLVSAETAARIDAESDSMDWPQEVTLGEVLRERFGDDLVDHVVSALQGGVYSSTSD FT DLSLRDTVPQLARALDRLKEEGKPVTITAAVQSIMADREKRNKARGYKPSVFAAFPGGY FT AELYEALAEKSGAKIHIDAFITGIQWKDGFTLKGAEGTFDKVIVAVPAPTAAMLLKSVA FT PEASALLKNIKLASSAVVGMKFDSAEGLPDNSGILVATDAEVTAKAFTFSSKKWPHLGQ FT RGGALVRASFGRFGDDAIARADEDLLVDTALDDLQTITGFDGRAAGLSEIYVQRWFGGL FT PVYGPGHSDLVAAIKDALPVGIYATGAWADGVGVPAVIDSATKVAKLLEDH" FT misc_feature 374961..376265 FT /note="HMMPfam hit to PF01593, Flavin containing amine FT oxidase" FT CDS 376342..377634 FT /transl_table=11 FT /gene="hemL" FT /locus_tag="DIP0409" FT /product="glutamate-1-semialdehyde 2,1-aminomutase" FT /EC_number="5.4.3.8" FT /note="Similar to Streptomyces coelicolor FT glutamate-1-semialdehyde 2,1-aminomutase HemL or SCD65.12 FT SW:GSA_STRCO (Q9F2S0) (438 aa) fasta scores: E(): 4e-96, FT 62.97% id in 424 aa, and to Escherichia coli FT glutamate-1-semialdehyde 2,1-aminomutase HemL or Gsa or FT PopC or B0154 SW:GSA_ECOLI (P23893) (426 aa) fasta scores: FT E(): 1.7e-75, 52.39% id in 418 aa" FT /protein_id="CAE48913.1" FT /translation="MTSTQRSQELFARAQQFTPGGVNSPVRAFGSVGGHARFIQSAKGS FT KLYDVDGNEYVDLVCSWGPMLLGNAHPEIVEAVQKAATNGLSFGAPTEAEVKIAEMIVD FT RTSVEEVRMVNSGTEATMSAVRLARGFTGRPKVIKFDGCYHGHVDALLASAGSGVATFA FT LPDSPGVTGASAADTIVVPYNDSEAVRAAFEAHPDQIACVIAEAAAGNMGTVAPQDNFN FT AKLKEVAHEHGALLILDEVMTGFRTSYNGWYGVDGVAGDLTTFGKVISGGLPAAAFGGR FT ADIMRYLAPEGPVYQAGTLSGNPVAMAAGMKSLELATPEVYDMVRANADRLAGLLHEAL FT DREGVAHHIQRAATMLSVRFAEGEGHNFDDMKAADTFRFPAFFHALLDNGIYASPSVFE FT TWFVSAALTDDDFDKIEKALRPAAQAAGKAK" FT misc_feature 376417..377622 FT /note="HMMPfam hit to PF00202, Aminotransferase class-III" FT misc_feature 377047..377157 FT /note="ScanRegExp hit to PS00600, Aminotransferases FT class-III pyridoxal-phosphate attachment site." FT CDS 377631..378239 FT /transl_table=11 FT /locus_tag="DIP0410" FT /product="Putative phosphoglycerate mutase" FT /note="Similar to Streptomyces coelicolor putative FT phosphoglycerate mutase SCD65.13 TR:Q9F2R9 (EMBL:AL392176) FT (233 aa) fasta scores: E(): 1.5e-35, 50.25% id in 199 aa FT and low similarity to Escherichia coli probable FT phosphoglycerate mutase 2 GpmB or B4395 or Z5997 or ECS5353 FT SW:PMG2_ECOLI (P36942) (215 aa) fasta scores: E(): 8.5e-06, FT 25.96% id in 181 aa" FT /protein_id="CAE48914.1" FT /translation="MTTTIVHLVRHGEVHNPERILYGRIPDYHLSSRGRSMAARTAASF FT AGHDVVALYSSPLERAQETAQPFAETLGLDVRIDDRLLEAGNQFEGLRVKGFRSQLWNP FT VRWPLMVNPLLPSWGEHYEDIAERMMDAIWGIREEAEGHEAIIVSHQLPIVCVQRHVQG FT KFLAHNPAVRQCDLASVSSLVFRGRDVVDYIYTEPAQEI" FT misc_feature 377637..378215 FT /note="HMMPfam hit to PF00300, Phosphoglycerate mutase FT family" FT CDS 378240..378800 FT /transl_table=11 FT /locus_tag="DIP0411" FT /product="Putative electron transport related protein" FT /note="Similar to Deinococcus radiodurans thiol:disulfide FT interchange protein DR0189 TR:Q9RXW6 (EMBL:AE001881) (185 FT aa) fasta scores: E(): 7.1e-09, 34.84% id in 132 aa, and to FT Bacillus halodurans thioredoxin BH1522 TR:Q9KCP7 FT (EMBL:AP001512) (177 aa) fasta scores: E(): 3.4e-08, 34.12% FT id in 126 aa and to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT0548 TR:AAK44771 FT (EMBL:AE006954) (216 aa) fasta scores: E(): 9.2e-31, 48.95% FT id in 192 aa" FT /protein_id="CAE48915.1" FT /translation="MKKLVCVLAAAMLLSACGSAGQDAVAVGGTFQFHSPGGKTEIFYD FT EGERAPVSEIRGEGLTSDSVSLADYKDKIVVLNAWGQWCAPCRSESDDLQEVHEYLGDK FT GTVVGINVRDYSKNIAQDFVKDNGITYPSIYDPPFKTAAQLGGVPASVVPTTIVLDKQH FT RPAAVFLREVTAQDLIKVIDSLS" FT misc_feature 378390..378791 FT /note="ProfileScan hit to PS50223, Thioredoxin-domain (does FT not find all)." FT CDS 378797..379588 FT /transl_table=11 FT /locus_tag="DIP0412" FT /product="Putative cytochrome C biogenesis protein" FT /note="Similar to Mycobacterium leprae B2168_C1_192 ML2411 FT TR:Q49810 (EMBL:U00018) (262 aa) fasta scores: E(): FT 8.6e-46, 53.2% id in 250 aa" FT /protein_id="CAE48916.1" FT /translation="MNILASGLGESVADVASSGPLLLGILAAALAGFVSFASPCVIPLV FT PGYMSYLAGVVGAEVELSETGPRVRTRRWRVVGAALLFVLGFTVVFTLATATVFGAISA FT LTLNAGTLMRIGGVVTIVMGLVFMGAVPMLQEEHRFSPRRWSTILGAPLLGGVFALGWT FT PCLGPTLAAIISVSAGTEGMTALRGVLLIIGYCVGLGIPFLIVALGSARVMMGLRKYSR FT IIQIIGGCALVLVGLALVSGQWAHFINWVRQWTVEYGATLI" FT misc_feature order(378854..378922,379034..379102,379130..379189, FT 379250..379318,379361..379429,379463..379531) FT /note="6 probable transmembrane helices predicted for FT DIP0412 by TMHMM2.0" FT misc_feature 378878..379519 FT /note="HMMPfam hit to PF02683, Cytochrome C biogenesis FT protein transmembrane region" FT CDS 379597..381189 FT /transl_table=11 FT /locus_tag="DIP0413" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 57.1 kDa protein Rv0528 or MTCY25D10.07 TR:O06394 FT (EMBL:Z95558) (529 aa) fasta scores: E(): 3.9e-103, 49.43% FT id in 532 aa" FT /protein_id="CAE48917.1" FT /translation="MVRYLKKAWHWLTSMRTALALLFILAVAAIPGALLPQRSLNESKV FT IEYIQNNGKIAEIYDKLQLFDVFSSTWFNAIFGLLFLSLIGCIIPRSWDHYKAMKTQPV FT RAPKNLDRLPMHGVGSVDKPIDEIDIRSHFKGWHVAEYSADQDRAGAVSFSAERGYLRE FT FFNLTFHLGLVGMLAAIAVGKMFSYEGQVIIVTGDEKSTEFCNTATANYDSFRAGPVFD FT GTGLNPFCFVAHDFTADYLPNGQAKMFSSNVSYAQGDRIFDDVSTWDDYSLRVNHPLRI FT AGDRVYLQGHGYAPTFSIQWPNGEKRTQTVQWQPTDPTFFLSDGVVRFDPPAGMNDSVY FT DRRQHQLAIQGLFAPTASWEGENHELLTSRFPAMTDPAVAIDVYRGDNGLDSGKGQNLF FT KLDTSLVHSGQLQRLERVNLTKGESVTLDDGTVVTFEGAEEFANYQISHDPTQVWTLLF FT SIITLGSLAGSLVIKRRRIWVRLRPVSPSVTQIETGGLARTDRAGWGEEYDRIHREILG FT LPDPEYSDPELGR" FT misc_feature 379597..379719 FT /note="Signal peptide predicted for DIP0413 by SignalP 2.0 FT HMM (Signal peptide probability 0.981) with cleavage site FT probability 0.549 between residues 41 and 42" FT misc_feature order(379630..379698,379798..379866,380086..380145, FT 380944..381012) FT /note="4 probable transmembrane helices predicted for FT DIP0413 by TMHMM2.0" FT CDS 381198..382097 FT /transl_table=11 FT /locus_tag="DIP0414" FT /product="Putative cytochrome C related protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT cytochrome C assembly family protein MT0551 TR:AAK44774 FT (EMBL:AE006954) (324 aa) fasta scores: E(): 6.3e-54, 47.81% FT id in 320 aa" FT /protein_id="CAE48918.1" FT /translation="MNVNSNLAQLSDMAFASSFVIYFIALVLSIVYYMKVKGIVDQQRE FT GLEPSTASADKFAGMTQMIVWLGVFVHIASVVLRGLSASRFPFGNLYEYILVISAFAVA FT VAAGFLQRHELRAMWPWVLTPVLALLFYGGTKLYADSAPVVPALQSFWFPIHVSTVSIG FT ASIGLISGVASLLYLLRMSKNKRLAALTSPLPSAKTLDAIAYRTAIVTVPVFGLGIVLG FT AIWAESAWGRFWGWDPKETVAFITWILYAAYLHARATAGWRDTKAAWINIVALITMVFN FT LFFINIVVSGLHSYAGLN" FT misc_feature order(381240..381299,381387..381440,381468..381527, FT 381546..381614,381657..381725,381807..381875, FT 381918..381977,381996..382064) FT /note="8 probable transmembrane helices predicted for FT DIP0414 by TMHMM2.0" FT misc_feature 381393..382016 FT /note="HMMPfam hit to PF01578, Cytochrome C assembly FT protein" FT CDS complement(382094..382363) FT /transl_table=11 FT /locus_tag="DIP0415" FT /product="Putative ArsR family regulatory protein" FT /note="Similar to Streptomyces coelicolor putative FT ArsR-family transcriptional regulator SC4A9.07 TR:Q9L1V5 FT (EMBL:AL138668) (117 aa) fasta scores: E(): 7.2e-10, 44.57% FT id in 83 aa, and to Methanococcus jannaschii hypothetical FT protein MJ1325 TR:Q58721 (EMBL:U67573) (89 aa) fasta FT scores: E(): 5.1e-09, 42.16% id in 83 aa" FT /protein_id="CAE48919.1" FT /translation="MQTVKAAALFKVLSDPTRLQLLYLVAENPERLCCVDLSEALAVSA FT PTVTHHMKKLADANLVTRHKRGKWAYYEIVNDEFARVHELIRTL" FT misc_feature complement(382097..382336) FT /note="HMMPfam hit to PF01022, Bacterial regulatory FT protein, arsR family" FT misc_feature complement(382100..382342) FT /note="HMMSmart hit to SM00418, helix_turn_helix, Arsenical FT Resistance Operon Repressor, DNA-binding" FT misc_feature complement(382142..382189) FT /note="FPrintScan hit to PR00778, Bacterial regulatory FT protein ArsR family signature" FT misc_feature complement(382187..382234) FT /note="FPrintScan hit to PR00778, Bacterial regulatory FT protein ArsR family signature" FT misc_feature complement(382205..382270) FT /note="Predicted helix-turn-helix motif with score 1021 FT (+2.66 SD) at aa 32-53, sequence LCCVDLSEALAVSAPTVTHHMK" FT misc_feature complement(382238..382273) FT /note="FPrintScan hit to PR00778, Bacterial regulatory FT protein ArsR family signature" FT misc_feature complement(382289..382336) FT /note="FPrintScan hit to PR00778, Bacterial regulatory FT protein ArsR family signature" FT CDS complement(382403..382591) FT /transl_table=11 FT /locus_tag="DIP0416" FT /product="Putative membrane protein" FT /note="Low similarity to Mycobacterium tuberculosis CDC1551 FT hypothetical 6.1 kDa protein MT0553 TR:AAK44776 FT (EMBL:AE006954) (53 aa) fasta scores: E(): 4, 34.04% id in FT 47 aa" FT /protein_id="CAE48920.1" FT /translation="MGRLIILLVLIAAIVLLWKAFGPKTWKSPEPPQIKGPDDDEDFLW FT KLELEQYKKRKRDKEQE" FT misc_feature complement(382511..382591) FT /note="Signal peptide predicted for DIP0416 by SignalP 2.0 FT HMM (Signal peptide probability 0.922) with cleavage site FT probability 0.719 between residues 27 and 28" FT misc_feature complement(382529..382579) FT /note="1 probable transmembrane helix predicted for DIP0416 FT by TMHMM2.0" FT CDS 382590..382931 FT /transl_table=11 FT /locus_tag="DIP0417" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT0554 TR:AAK44777 FT (EMBL:AE006954) (105 aa) fasta scores: E(): 3.1e-05, 35.8% FT id in 81 aa" FT /protein_id="CAE48921.1" FT /translation="MVSFSGRVLWVDDIKKPVIDPTVKSEARKAVVVYGFARFILFVVL FT TAVIQLIAVAIQAPVPLLISATLALIVAMPLSVFLFKGVRVRATQAVALWSEQRKAEKD FT WVKRELSNR" FT misc_feature order(382683..382751,382764..382832) FT /note="2 probable transmembrane helices predicted for FT DIP0417 by TMHMM2.0" FT CDS complement(382906..383769) FT /transl_table=11 FT /gene="menA" FT /locus_tag="DIP0418" FT /product="probable 1,4-dihydroxy-2-naphthoate FT octaprenyltransferase" FT /EC_number="2.5.1.-" FT /note="Similar to Mycobacterium tuberculosis probable FT 1,4-dihydroxy-2-naphthoate octaprenyltransferase MenA or FT Rv0534c or MT0558 or MTCY25D10.13c SW:MENA_MYCTU (O06400) FT (292 aa) fasta scores: E(): 2.2e-58, 58.57% id in 280 aa, FT and to Escherichia coli 1,4-dihydroxy-2-naphthoate FT octaprenyltransferase MenA or B3930 SW:MENA_ECOLI (P32166) FT (308 aa) fasta scores: E(): 1.8e-23, 39.86% id in 296 aa" FT /protein_id="CAE48922.1" FT /translation="MSQATFADWKEGARPHTWANAFAPVIVGTGAAGAGIVWWKALLAL FT IVAWALIIGVNYANDYSDGIRGTDDDRTGPLRLTGSGLAEPAAVKRAAFIAFGVAGIAG FT IALSLTSAWWLIAIGFLCVAGAWFYTGGKNPYGYRGLGEVAVFIFFGLVAVMGTQFTQL FT GHVTYPGFACSVAIGAMSAGVNLVNNLRDIPTDKESGKITLAVRLGDPATRIVYYVLIT FT LPFLASISFFSWGSLGLLALPLAVKAAQPVKNGATGKDLIPVLGTTGKAMLAWSLLTTI FT GLTVLA" FT misc_feature complement(order(382912..382977,383059..383124, FT 383209..383274,383290..383355,383377..383430, FT 383443..383508,383596..383661)) FT /note="7 probable transmembrane helices predicted for FT DIP0418 by TMHMM2.0" FT misc_feature complement(382921..383718) FT /note="HMMPfam hit to PF01040, UbiA prenyltransferase FT family" FT CDS 383911..385020 FT /transl_table=11 FT /locus_tag="DIP0419" FT /product="Conserved hypothetical protein" FT /note="Low similarity in parts to Mycobacterium FT tuberculosis hypothetical 58.9 kDa protein precursor Rv2100 FT or MT2160 or MTCY49.40 SW:YL00_MYCTU (Q10709) (550 aa) FT fasta scores: E(): 1.7e-06, 32.57% id in 132 aa" FT /protein_id="CAE48923.1" FT /translation="MAFYRCCDIGDEFACEEILLNQFEYQRWLRVQPHPDDDVTAYCSA FT LGARIDKTEHFVLRRIDAISTLLELKGLHKLFLQLWHLDMPRLMAIAQALGGVRKEHWP FT DIDAVLVKMLTPTRDRQHLPGPRRIVNVIRQLLVELEQAHVVEEKEVRAMFYDAGTGKT FT GLDIVLSDASAEVIRESIAETKRVHSCDDEAALVILATGGGVRIKLFQPKMSDAVYTLS FT GARVPDSIAVGLEKKYHDIDKAEQASTNSYAFPATMRDYIQARDGHCRFPGCMVLASHC FT DIDHIEEYDAGGRTTPNNAQCLCRHHHNLKTSKAVDCVSANGIAVDWIMADGTEVTTAA FT EGVMFGQSFAQRVEARTKRRDAKLKYRTS" FT misc_feature 384679..384837 FT /note="HMMSmart hit to SM00507, HNH nucleases" FT misc_feature 384715..384855 FT /note="HMMPfam hit to PF01844, HNH endonuclease" FT CDS complement(384980..386089) FT /transl_table=11 FT /locus_tag="DIP0420" FT /product="Putative ligase" FT /note="Similar to Mycobacterium leprae O-succinylbenzoic FT acid-CoA ligase MenE or ML2257 TR:Q9CBB8 (EMBL:AL583924) FT (368 aa) fasta scores: E(): 7.1e-41, 43.71% id in 366 aa, FT and to Escherichia coli O-succinylbenzoic acid--CoA ligase FT MenE or B2260 SW:MENE_ECOLI (P37353) (451 aa) fasta scores: FT E(): 8.2e-14, 29.28% id in 379 aa" FT /protein_id="CAE48924.1" FT /translation="MILEPLIVPAYPNEILDELEAAIAGERCYLPVPPNDQLLSRTLKA FT GQPIDDDIALVVATSGSTGTPKGALLTAANLVSSADATHQYLGGEAQWLLAMPGYHIAG FT IQVLIRSLIAGYDPLILDVSHGFNISEFARIANTLDDTTYTSLTPMQLLKAMDTLEGIE FT SLRRFAAILVGGAPLRADDLRAAKELGINVVTTYGSSETSGGCVYNGRPIPGAKVRVVG FT ERIHLGGPMVARGYRNGEEFGDWFITSDTGTITDGVLTVTGRVDTIIDSGGLKIHPEIL FT EQQILSVRGVSGVCVVGVPDRRLGQAIVAAYEGSAHPTEIITALDDLPRWQLPKDIRRV FT DQLPLIGPGKVNRQAVLKMFDTSISHRGA" FT misc_feature complement(385202..385939) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT misc_feature complement(385889..385924) FT /note="ScanRegExp hit to PS00455, Putative AMP-binding FT domain signature." FT CDS complement(386100..386966) FT /transl_table=11 FT /gene="menB" FT /locus_tag="DIP0421" FT /product="Putative naphthoate synthase" FT /note="Similar to Mycobacterium tuberculosis MenB or FT Rv0548c or MTCY25D10.27c TR:O06414 (EMBL:Z95558) (314 aa) FT fasta scores: E(): 4.5e-93, 78.62% id in 290 aa, and to FT Bacillus subtilis naphthoate synthase MenB SW:MENB_BACSU FT (P23966) (261 aa) fasta scores: E(): 1.4e-41, 54.78% id in FT 261 aa" FT /protein_id="CAE48925.1" FT /translation="MNPELWKPVEGFDNLTDITYHRHREEGIVRIAFDRPEVRNAFRPH FT TVDELYRALDHARQTSDVGTVLLTGNGPSPKDGGWAFCSGGDQRIRGRAGYQYEGDPAQ FT AGRLHILEVQRLIRTMPKVVIAVVNGWAAGGGHSLHVVCDMTIASREHAKFKQTDADVG FT SFDAGYGSAYLAKMVGQKFAREIFFLGRTYDAETMQRMGAVNIVVDHADLEDEAIQVGR FT EINGKSPTAQRMLKFAFNLTDDGLMGQQVFAGEATRLAYMTDEAVEGRDSFLEKRDPDW FT SRFPYYF" FT misc_feature complement(386283..386306) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(386340..386882) FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family" FT misc_feature complement(386532..386594) FT /note="ScanRegExp hit to PS00166, Enoyl-CoA FT hydratase/isomerase signature." FT CDS 386971..387933 FT /transl_table=11 FT /gene="menC" FT /locus_tag="DIP0422" FT /product="Putative O-succinylbenzoate-CoA synthase" FT /note="Similar to Mycobacterium tuberculosis probable FT O-succinylbenzoate-CoA synthase MenC or Rv0553 or MT0579 or FT MTY25D10.32 TR:AAK44802 (EMBL:Z95558) (326 aa) fasta FT scores: E(): 5.1e-57, 51.51% id in 330 aa, and to FT Pseudomonas putida muconate cycloisomerase I CatB FT SW:CATB_PSEPU (P08310) (374 aa) fasta scores: E(): 5.5e-08, FT 28.67% id in 272 aa" FT /protein_id="CAE48926.1" FT /translation="MTIVAPMDEILERAHVVALPMRVKFRGIMVREAVLFDGPKGWGEF FT SPFVEYGVQEAAQWLRCGLEMAFQGPPPMIRDAVEVNATIPAVSPDQVPEILARYPGCT FT TVKVKVAEGDDAARVAMVREVLPDARIRVDANRGWTVDQAVAASKHLGELEYMEQPCAS FT VAELAELRRRISVPIAADESIRRVSDPYEVARLHAADVAVVKAAPLGGPRNIVDIAKFY FT QQRGLSLTVASALDTGVGMNAGIAVAAAIDSNPAGLATQRLFVEDVTEPRTIVDGKMSV FT EMLAPDPARLAEFEVTGPRRDWWLDRVRGALECLHDFIP" FT misc_feature 387310..387699 FT /note="HMMPfam hit to PF01188, Mandelate racemase / FT muconate lactonizing enzyme, C-terminal domain" FT CDS 387917..389446 FT /transl_table=11 FT /locus_tag="DIP0423" FT /product="Putative menaquinone biosynthesis protein" FT /note="Similar to Mycobacterium leprae putative FT 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate FT synthase/2-oxoglutarate decarboxylase MenD or ML2270 FT TR:Q9CBB0 (EMBL:AL583925) (556 aa) fasta scores: E(): FT 1.2e-16, 41.03% id in 563 aa, and to Bacillus subtilis FT menaquinone biosynthesis protein MenD [includes: FT 2-succinyl-6-hydroxy- 2,4-cyclohexadiene-1-carboxylate FT synthase; 2-oxoglutarate decarboxylase] MenD SW:MEND_BACSU FT (P23970) (580 aa) fasta scores: E(): 6e-15, 29.76% id in FT 561 aa" FT /protein_id="CAE48927.1" FT /translation="MTSSPELARAVAATLARHVTDVVICPGSRNSPLSLELIARDDIRV FT HTRIDERSAAFLALGLARSSKRHVAVVTTSGTAVANCAPAMIEAAYSHTPLIMVSADRP FT ERLHGTGANQTIEQRGIFNVVDTDHVVDITDLNSISFARNVIHINVALDVPLVDVLPEV FT GDPVERVREVIEVDHGEVVLNLNERILVVAGDEAWEVPGLEDVPTIAEPSAPAPYHPVH FT PLAAQIFAHKEIKPEHIVVVGHPTLHRAVLSLLADVPVTVLTKTDTITGNPQAVGSRVK FT VTGELDKRWLQICEDASTLCADRVKEVLEGHGFTGLHVAAAVADTMAVGDTLFLGASNP FT VRDASLVGMPLGGVDIFAARGAAGIDGTVSQAVGVALDVQHRDATAIRADRTVALMGDV FT TFLHDVGGLLGARPENLTIVVANDDGCGIFETLEIGAPEFRPSFEQAFGTPHGVHIEAI FT AQAYGVNYLRAETLPELIEALIDTTDSAGFNIIEAVTTRSTRRDIDKALTL" FT misc_feature 387923..388420 FT /note="HMMPfam hit to PF02776, Thiamine pyrophosphate FT enzyme, N-terminal TPP binding domain" FT CDS 389443..389835 FT /transl_table=11 FT /locus_tag="DIP0424" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 18.7 kDa protein Rv0556 or MTCY25D10.35 TR:O06422 FT (EMBL:Z95558) (171 aa) fasta scores: E(): 1.2e-11, 42.14% FT id in 121 aa" FT /protein_id="CAE48928.1" FT /translation="MKRRLHQLVLALYAAAVLGCASMVIGPAINDYHIARNSGRVLAKV FT LDVGTFRTTVEYQDEDNMYHSPKGGLMYPTGLGRGQRVWVNYSKDNPDLVKVEGRAWTL FT AIIPALSIWVVASLIFAGLWWIVGRL" FT misc_feature 389443..389526 FT /note="Signal peptide predicted for DIP0424 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.587 between residues 28 and 29" FT misc_feature order(389461..389529,389755..389823) FT /note="2 probable transmembrane helices predicted for FT DIP0424 by TMHMM2.0" FT CDS 389811..390836 FT /transl_table=11 FT /locus_tag="DIP0425" FT /product="Putative glycosyl transferase" FT /note="Similar to Agrobacterium tumefaciens Agr_C_4173p FT TR:AAK88039 (EMBL:AE008145) (363 aa) fasta scores: E(): FT 1.9e-22, 31.8% id in 305 aa" FT /protein_id="CAE48929.1" FT /translation="MVDRGPAVKVAIVTESYLPNINGVTNSVLRIEEYAKAHGHEVLVI FT APRICVNVIRTLPIGLPVGVEKRLRAFDPDVIHLASPYAFAARAAFIAQKMAVPCVAVY FT QTDVAAYQQHYHLTWLKNAHWSWMRAFHNRAALTLAPSTPAKEQLENHGIKNVQLWGRG FT VDTELFHPRPKNNPKKVVGYVGRLAPEKSVHRLAALNHRDDLEVVIVGDGILREQLERA FT LPNARFLGQLRGEALAREYARFDVFVHTGDHETFGQTIQEAHASGVPVVAPRSGGPIDL FT ITPANGVFITEGIEQAVDYVLAHDFDPRSTVVTWETVCSQLFAHYRDVVTLDNRGKGII FT G" FT misc_feature 390303..390716 FT /note="HMMPfam hit to PF00534, Glycosyl transferases group FT 1" FT CDS 390871..391503 FT /transl_table=11 FT /gene="menH" FT /locus_tag="DIP0426" FT /product="Putative ubiquinone/menaquinone biosynthesis FT methlytransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT ubiquinone/menaquinone biosynthesis methlytransferase FT MT0584 TR:AAK44807 (EMBL:AE006956) (219 aa) fasta scores: FT E(): 6.5e-49, 63.15% id in 209 aa, and to Bacillus FT stearothermophilus 2-heptaprenyl-1,4-naphthoquinone FT methyltransferase MenH or MenG SW:MENH_BACST (O86169) (234 FT aa) fasta scores: E(): 2.5e-18, 39.45% id in 218 aa" FT /protein_id="CAE48930.1" FT /translation="MGKNYDITNTVLSFGRDKKWREKTRERLQLKAGERVLDLAAGTAV FT STVELTRSGAWVVACDFSQGMLAAGKDRNVPKVVGDGMKLPFADNSFDAVTISYGLRNV FT HDFRMALREMARVTKPGGRITIAEFSTPNLPGFKTIYKEYLTKLLPLIAKVVGTNPEAY FT EYLAESIRAWPEREELAAAINENGWHDAGWQNLSLGIVALHSAVKPS" FT misc_feature 390871..391494 FT /note="HMMPfam hit to PF01209, ubiE/COQ5 methyltransferase FT family" FT misc_feature 390955..391257 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 391144..391260 FT /note="ProfileScan hit to PS50124, Generic FT methyl-transferase profile." FT CDS complement(391490..392440) FT /transl_table=11 FT /locus_tag="DIP0427" FT /product="Putative lactate dehydrogenase" FT /note="Similar to Clostridium acetobutylicum lactate FT dehydrogenase CAC3552 TR:AAK81477 (EMBL:AE007851) (320 aa) FT fasta scores: E(): 1.6e-36, 38.6% id in 316 aa, and to FT Bacillus subtilis L-lactate dehydrogenase Ldh or LctE FT SW:LDH_BACSU (P13714) (320 aa) fasta scores: E(): 2.9e-25, FT 33.95% id in 324 aa" FT /protein_id="CAE48931.1" FT /translation="MNKLVVIGLGHVGSYVLSYAMASGLYAEIATIDTNPGVALGEAID FT LAQATGVPGTTNTYCHEGTYADCADADVIICAAGESIVPDPNDPTRMPDRSELAQISGA FT VIRDVMTNITANVGENPPVLILITNPLDAMVHIAATEFGYPKVFGTGTMLDSARLRYII FT GTELGIDPKSVTGYMMGEHGSTSVPILSQVNVQGLRWEELEAWHGKPLPTAPEMQEKVV FT RAAYDVLLSKGWTNAGVARSANELAKCVLLNERAVHPICTPLHGEYGLEDVSLSIPTEI FT THEGAGRKMLPQLNEWELEQLHKSAEFIRETVRKA" FT misc_feature complement(391520..391987) FT /note="HMMPfam hit to PF02866, lactate/malate FT dehydrogenase, alpha/beta C-terminal domain" FT misc_feature complement(391871..391912) FT /note="FPrintScan hit to PR00086, L-lactate dehydrogenase FT signature" FT misc_feature complement(391946..392002) FT /note="FPrintScan hit to PR00086, L-lactate dehydrogenase FT signature" FT misc_feature complement(391991..392440) FT /note="HMMPfam hit to PF00056, lactate/malate FT dehydrogenase, NAD binding domain" FT misc_feature complement(392006..392068) FT /note="FPrintScan hit to PR00086, L-lactate dehydrogenase FT signature" FT misc_feature complement(392285..392359) FT /note="FPrintScan hit to PR00086, L-lactate dehydrogenase FT signature" FT misc_feature complement(392360..392434) FT /note="FPrintScan hit to PR00086, L-lactate dehydrogenase FT signature" FT CDS complement(392451..393653) FT /transl_table=11 FT /locus_tag="DIP0428" FT /product="Putative FAD-linked oxidoreductase" FT /note="Similar to Mycobacterium leprae putative FAD-linked FT oxidoreductase ML2276 TR:Q9CBA6 (EMBL:AL583925) (408 aa) FT fasta scores: E(): 7.2e-61, 54.47% id in 391 aa" FT /protein_id="CAE48932.1" FT /translation="MGHVSNSPFSVDVLVVGGGPAGSAAAIHAAKAGYSVLLIDAQPFP FT RDKTCGDGLTPRAVHQLEALGVDVTSRYRSFGLKLHGFGGSVTVPWPESHFGQVSSAMP FT RMKFDAMLWEMAAQHATTWTATASEVEIDSAIRSVTMSDGRVVKPRSVIVADGVRSTFG FT KLLGRTWHRGEVYGIAARSYCTTPRSTEPWMHSHLELRDDSTTLPGYGWIFPIGDGTAN FT VGCGALSTDKRPAKINTKKLLRHYASQQTDWEFGTPQRVASALLPMGGAVSTIAGPNWM FT LIGDAAACVNPLNGEGIDYGLETAALAVAHLDNPLEWPHILRETYGEAFLLARTAARLL FT TYPQFLPLTGPIALRTPLMASAARLMGNLVTEEDKDIVARAWRAAGWGVTKIRGGSPLW FT D" FT misc_feature complement(392730..392780) FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT misc_feature complement(392778..392825) FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT misc_feature complement(393165..393212) FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT misc_feature complement(393171..393200) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature complement(393240..393617) FT /note="HMMPfam hit to PF01494, FAD binding domain" FT misc_feature complement(393531..393617) FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature complement(393552..393620) FT /note="FPrintScan hit to PR00420, Aromatic-ring hydroxylase FT (flavoprotein monooxygenase) signature" FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT CDS 393735..394727 FT /transl_table=11 FT /locus_tag="DIP0429" FT /product="Putative polyprenyl diphosphate synthase FT component" FT /note="Similar to Mycobacterium leprae polyprenyl FT diphosphate synthase component ML2277 TR:Q9CBA5 FT (EMBL:AL583925) (330 aa) fasta scores: E(): 1.6e-57, 51.69% FT id in 325 aa, and to Bacillus stearothermophilus FT heptaprenyl diphosphate synthase component II HepT or FT HepS-2 SW:HEP2_BACST (P55785) (320 aa) fasta scores: E(): FT 9.6e-33, 38.99% id in 318 aa" FT /protein_id="CAE48933.1" FT /translation="MGNGTRVDLGEQNLNEEIAAGMIRVEDLLREELSKGEDFLVEKVM FT HLAEAGGKRFRPMFALLASQYGSQPMSENVIKAAVVVEMTHLATLYHDDVMDEADKRRG FT VDSANFRWNNSVAILAGDILLAHVARLMADLGVETVAHFSETFAELVTGQMRETIGARD FT GDPIEHYLNVINEKTGVLIASAGFLGSMHAGASAEHVEALRAYGRAIGMVFQIVDDIID FT IFSDTTDSGKTPGTDLREGVFTLPVLYALSEDTAVGEELRSILTGPLTDDATVAHALDL FT LARSTGRERALADVHRYLEEAERQLALLPQNSTTDALRSLAHYTVKRVG" FT misc_feature 393852..394625 FT /note="HMMPfam hit to PF00348, Polyprenyl synthetase" FT misc_feature 394260..394307 FT /note="ScanRegExp hit to PS00038, Myc-type, FT 'helix-loop-helix' dimerization domain signature." FT misc_feature 394362..394400 FT /note="ScanRegExp hit to PS00444, Polyprenyl synthetases FT signature 2." FT tRNA 394779..394860 FT /gene="tRNA-Tyr" FT /product="transfer RNA-Tyr" FT /anticodon=(pos:394813..394815,aa:Tyr) FT /note="tRNA Tyr anticodon GTA, Cove score 49.98" FT tRNA 395053..395125 FT /gene="tRNA-Thr" FT /product="transfer RNA-Thr" FT /anticodon=(pos:395086..395088,aa:Thr) FT /note="tRNA Thr anticodon GGT, Cove score 70.75" FT tRNA 395164..395235 FT /gene="tRNA-Met" FT /product="transfer RNA-Met" FT /anticodon=(pos:395196..395198,aa:Met) FT /note="tRNA Met anticodon CAT, Cove score 69.34" FT tRNA 395264..395336 FT /gene="tRNA-Trp" FT /product="transfer RNA-Trp" FT /anticodon=(pos:395297..395299,aa:Trp) FT /note="tRNA Trp anticodon CCA, Cove score 64.14" FT CDS 395376..395744 FT /transl_table=11 FT /gene="secE" FT /locus_tag="DIP0430" FT /product="Putative translocase protein" FT /note="Similar to Corynebacterium glutamicum SecE protein FT TR:Q9LAK8 (EMBL:AF130462) (111 aa) fasta scores: E(): FT 2.5e-21, 65.97% id in 97 aa, and to Mycobacterium FT tuberculosis probable preprotein translocase subunit SecE FT or Rv0638 or MT0667 or MTCY20H10.19 SW:SECE_MYCTU (P96929) FT (161 aa) fasta scores: E(): 3.8e-05, 33.62% id in 116 aa" FT /protein_id="CAE48934.1" FT /translation="MLNRYSDIVSTSYQFSTSRRAVSDQQPRPTGKRQLAGVSTTSTAS FT YEAKKVAPTGGDDERNGNKVVSFVPEVASEMKKVIWPTAQQMMSYTLIVFAFLILVTAL FT VAGVDFLAGLGVEKVLTK" FT misc_feature 395565..395738 FT /note="HMMPfam hit to PF00584, SecE/Sec61-gamma subunits of FT protein translocation complex" FT misc_feature 395649..395717 FT /note="1 probable transmembrane helix predicted for DIP0430 FT by TMHMM2.0" FT CDS 395838..396629 FT /transl_table=11 FT /gene="nusG" FT /locus_tag="DIP0431" FT /product="Putative transcription antitermination protein" FT /note="Similar to Corynebacterium glutamicum transcription FT antitermination protein NusG TR:Q9LAK7 (EMBL:AF130462) (318 FT aa) fasta scores: E(): 8.5e-66, 71.91% id in 267 aa, and to FT Streptomyces coelicolor transcription antitermination FT protein NusG or SCD82.18 SW:NUSG_STRCO (P36266) (300 aa) FT fasta scores: E(): 1e-35, 44.27% id in 262 aa" FT /protein_id="CAE48935.1" FT /translation="MSEENSFAEAFDEAVQNTISAEAEEFTADGELEVVEETAQEADLT FT GGEKNEDAEYKARLRKYTRELKKLPGAWYIIQCYSGYENKVKTNLDMRAQTLEVEDSIF FT DVVVPIEQAIELRDGKRKLVKRKLLPGYVLVRMDINDRSWSVVRDTPGVTSFVGNEGNA FT TPVKHRDVAKFLMPQEATESEAVNAEGEKVVAMPTDSTKPKTAVDFEVGEAVTILSGAF FT ASVSATISGIDHENAKIQALVSIFGRETPVELAFDQVEKIS" FT misc_feature 396045..396185 FT /note="HMMPfam hit to PF02357, Transcription termination FT factor nusG" FT misc_feature 396210..396248 FT /note="FPrintScan hit to PR00338, Transcription termination FT factor NUSG signature" FT misc_feature 396495..396542 FT /note="FPrintScan hit to PR00338, Transcription termination FT factor NUSG signature" FT misc_feature 396549..396599 FT /note="FPrintScan hit to PR00338, Transcription termination FT factor NUSG signature" FT misc_feature 396570..396599 FT /note="ScanRegExp hit to PS01014, Transcription termination FT factor nusG signature." FT CDS 396774..397202 FT /transl_table=11 FT /gene="rplK" FT /locus_tag="DIP0432" FT /product="50S ribosomal protein L11" FT /note="Similar to Corynebacterium glutamicum 50S ribosomal FT protein L11 RplK TR:Q9LAK6 (EMBL:AF130462) (145 aa) fasta FT scores: E(): 2.3e-45, 90.27% id in 144 aa" FT /protein_id="CAE48936.1" FT /translation="MAPKKKVTGLIKLQIQAGQANPAPPVGPALGAHGVNIMEFCKAYN FT AATENQRGNVVPVEITVYEDRSFDFKLKTPPAAKLLLKAAGLQKGSGVPHTQKVGSVTM FT DQVKEIAQTKMEDLNANDIENAARIIAGTARSMGIEVK" FT misc_feature 396804..397199 FT /note="BlastProDom hit to PD001367, PD001367" FT /note="HMMPfam hit to PF00298, Ribosomal protein L11" FT CDS 397269..397976 FT /transl_table=11 FT /gene="rplA" FT /locus_tag="DIP0433" FT /product="50S ribosomal protein L1" FT /note="Similar to Corynebacterium glutamicum 50S ribosomal FT protein L1 RplA TR:CAC38385 (EMBL:AF130462) (236 aa) fasta FT scores: E(): 1.5e-66, 82.47% id in 234 aa" FT /protein_id="CAE48937.1" FT /translation="MGNKSKAYKAAAEKIDKGRLYTPLKAAELVKETSSKNCDATVDVA FT IRLGVDPRKADQLVRGTVSLPNGTGKSVRVAVFAEGEKATEAQAAGADIVGTTELIEQI FT TAGTIEFDVAIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAIAEVKGGKISF FT RVDKASNLHAIIGKASFDAEKLAENYGALLDEINRIKPSSAKGIYVKKVTLTSTFGPGV FT PVDPSIQKNYTQA" FT misc_feature 397311..397931 FT /note="HMMPfam hit to PF00687, Ribosomal protein L1p/L10e FT family" FT misc_feature 397344..397940 FT /note="BlastProDom hit to PD001314, PD001314" FT misc_feature 397629..397685 FT /note="ScanRegExp hit to PS01199, Ribosomal protein L1 FT signature." FT repeat_region complement(398006..399433) FT /note="5x repeat that includes two CDSs: The first encoding FT for a putative insertion element DNA-binding protein and FT the second one dowstream for a putative transposase FT (Similar to Escherichia coli putative transposase InsK for FT insertion sequence element IS150)" FT CDS complement(398031..398843) FT /transl_table=11 FT /locus_tag="DIP0434" FT /product="Putative transposase" FT /note="Similar to Escherichia coli putative transposase FT InsK for insertion sequence element IS150 or B3558 FT SW:INSK_ECOLI (P19769) (283 aa) fasta scores: E(): 1.3e-42, FT 44.48% id in 263 aa. Identical to DIP1517, DIP1526, DIP1809 FT and DIP2123" FT /protein_id="CAE48938.1" FT /translation="MIAVSGLARSTFFDHQRRFDLPDKYADLKTQIKKIFHDSNTTFGY FT RRVWRALRNNNTIVNKKVVRRLMRQLGLVSKIRRKKYNSYRGTVSHIADNVLDRRFTQD FT APNKAWVSDVTEFRVAGTKVYLSPVMDLFDRTILAHTLSTSPNTQLTSRALADAIAMFS FT PGKGLIVHTDQGFQYQHASWRNLIESVGGVQSMSRKGNCYDNAVMENFFGHLKSEMYHD FT VYFTSVDELCQAIDEYILWYNTYRLQERFKGLAPMQYRNQTLAKTLTV" FT misc_feature complement(398061..398540) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS complement(398891..399373) FT /transl_table=11 FT /locus_tag="DIP0435" FT /product="Putative insertion element DNA-binding protein" FT /note="Similar to Streptococcus pneumoniae hypothetical FT 20.7 kDa protein TR:Q9KK22 (EMBL:AF154034) (171 aa) fasta FT scores: E(): 1.1e-07, 32.69% id in 156 aa, and to Yersinia FT pestis insertion element IS1661 DNA-binding protein YPO4046 FT TR:CAC93502 (EMBL:AJ414160) (171 aa) fasta scores: E(): FT 0.00096, 26.06% id in 165 aa. Identical to DIP1518, FT DIP1525, DIP1808 and DIP2124" FT /protein_id="CAE48940.1" FT /translation="MHPRSKLSQAQRELAVDLFEEGYGSRAVANRLGVRREQVRHLEDR FT FRLHGRLCLVSKPTKKQYSFDTKMEILRRYRTGELKSDLAKEYGLSSPNLISHWVWQVN FT KGGSDALQPKPKGRPKGSGQSVPMTEEDTLRRENELLKAEVAYLKKLRDLREQRRG" FT misc_feature complement(399242..399307) FT /note="Predicted helix-turn-helix motif with score 1129 FT (+3.03 SD) at aa 23-44, sequence YGSRAVANRLGVRREQVRHLED" FT CDS 399728..400243 FT /transl_table=11 FT /gene="rplJ" FT /locus_tag="DIP0436" FT /product="50S ribosomal protein L10" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L10 RplJ or Rv0651 or MT0680 or MTCY20H10.32 FT SW:RL10_MYCTU (P96940) (178 aa) fasta scores: E(): 1.1e-34, FT 64.49% id in 169 aa" FT /protein_id="CAE48941.1" FT /translation="MANPKNTESLAELKNRFADIDSVFVTEYRGLTVAQITELRRALGS FT DVQYSVAKNTLIKLAAKEAGIEGLDDILTGPTAVAFIKGEAVDAAKAMKKFASENKAFV FT IKGGYMDGNALSAAQVDAIAELDNRETTLAKLAGAMKGNLAKAAGLFNAPASQVARLGA FT ALQEKKEA" FT misc_feature 399728..400021 FT /note="HMMPfam hit to PF00466, Ribosomal protein L10" FT misc_feature 399743..399847 FT /note="ScanRegExp hit to PS01109, Ribosomal protein L10 FT signature." FT CDS 400287..400667 FT /transl_table=11 FT /gene="rplL" FT /locus_tag="DIP0437" FT /product="50S ribosomal protein L7/L12" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L7/L12 RplL or Rv0652 or MT0681 or MTCY20H10.33 FT SW:RL7_MYCTU (P37381) (130 aa) fasta scores: E(): 2.3e-26, FT 73.07% id in 130 aa" FT /protein_id="CAE48942.1" FT /translation="MAKLTKDELIEAFKEMTLIELSEFVKEFEEVFEVTAAAPVAVAAA FT GAAPAAAEEEKTEFDVVLEDAGAKKIGVIKAVRELVSGLGLKEAKELVEGAPKAILEGA FT NKDDAEAAKAKLEEAGAKVTLK" FT misc_feature 400458..400664 FT /note="HMMPfam hit to PF00542, Ribosomal protein L7/L12 FT C-terminal domain" FT misc_feature 400464..400664 FT /note="BlastProDom hit to PD001326, PD001326" FT CDS 400793..402262 FT /transl_table=11 FT /locus_tag="DIP0438" FT /product="Putative secreted protein" FT /note="C-terminal similar to Bacillus halodurans surface FT adhesin A precursor PsaA or BH0516 TR:Q9KFG3 FT (EMBL:AP001508) (300 aa) fasta scores: E(): 2.9e-14, 34.09% FT id in 176 aa" FT /protein_id="CAE48943.1" FT /translation="MVRVRSLLAVLAVATLSACAAPVEQHHRTEVVATTPIVADLVRHV FT AGERAEVTALMPPGVDPHTYEPRLRAVRDIANADIAFTNGLLLEPHSLSTTIEEALPDN FT APMVPLAEQVTSYGGKLKPLVENIALDTVWLGMRIVGKADSEVEIVTEKIDAPEDSKAT FT AYITSTFGVPELVFDEEGDNYFLPADAHTHVSWSFSKPGMYHLTFAAKVKGKLVARNTI FT NVAVGVDAPNDVLDEGHVDIAVDLAHKNIMLRGDSPDGTNIAYDYDPATTTISVPNSTL FT QQIPAQYRFMGRPGDEVYLLPQAVLGKHVHGEVDPHVWHNMANARAMVEAIRDKLSEVD FT PAGAQIYSANAAAYIAEIDRVNNEVRMILDTIPKKNRHLVTTHDGYSYLGDAYGLSIAG FT FVSPNPSVEPSPRDIIALTRTLENLHVPAVFIEPQLALRANHLTVTADKLGIQVCRIYG FT DSLDDEVPTYLDFMKYNAHSLARCLGQSEGK" FT misc_feature 400793..400852 FT /note="Signal peptide predicted for DIP0438 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.583 between residues 20 and 21" FT misc_feature 400793..409559 FT /note="Anomalous G+C content (52.22%). Putative FT fimbriae-related pathogenicity islet" FT misc_feature 400811..402244 FT /note="HMMPfam hit to PF01297, Periplasmic solute binding FT protein family" FT misc_feature 400874..400930 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 400874..400939 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 400949..401005 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 400967..401008 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 401006..401059 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 401006..401065 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 401666..401722 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT CDS 402263..403159 FT /transl_table=11 FT /locus_tag="DIP0439" FT /product="Putative membrane protein" FT /note="No significant database matches. Note: Also presents FT similarities with DIP1724, DIP0442, DIP2325 and DIP0443" FT /protein_id="CAE48944.1" FT /translation="MKRIAAAVCAASLLIAQPAYAQQDPALQQQVSETERIAPAGEKVV FT IDHGHIDIGAIEVDGDFDLLARDDTEAHPVWRHLDDMVFKVSDAALQTLPEDSTFEFTG FT AKAGDKVYVVPQSQISGVPWIGWNSQAPSIQKVTDRGVTLELAGYQGPGHFSLFLQAGG FT VQKPQVIWDADEKGAQPMWVELNTHTHANWVFTEPGVHQVAVRLKLPRTDGTEVETTRV FT LRFAVGDASVAEAQKATFDGEMTASESGEEQAKGSANIGLIAGGVVAVIVVIAGAAVFM FT SRQSARRRAEAKNVANG" FT misc_feature 402263..402325 FT /note="Signal peptide predicted for DIP0439 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.971 between residues 21 and 22" FT misc_feature 403040..403108 FT /note="1 probable transmembrane helix predicted for DIP0439 FT by TMHMM2.0" FT CDS 403152..403880 FT /transl_table=11 FT /locus_tag="DIP0440" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Deinococcus radiodurans manganese ABC FT transporter, ATP-binding protein, putative DR2284 TR:Q9RS43 FT (EMBL:AE002060) (239 aa) fasta scores: E(): 5.3e-25, 39.57% FT id in 235 aa" FT /protein_id="CAE48945.1" FT /translation="MAKVLQCSDLRVSLSGREVVKGINFSVDAGEFLGLLGPNGAGKTT FT LMRAILGLIPSQGNIHIDGRIGYVPQRHEFAWDYPIDVYHTVLNGRAGMIGWLRRPKVA FT DFAAVDAALEQVRLTHLADRPIGELSGGQRQRVLVARALATKPQLLLFDEPFTGLDNPS FT TELLLGLFEELAQAGNAIMMSTHNLPEAMAACHRVLLFNGEVVATGVPSQMLDAQPWKT FT TFRVEDGSPLLASLGIGKAN" FT misc_feature 403236..403763 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 403239..403763 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 403245..403322 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 403260..403283 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 403536..403580 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 403536..403751 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 403882..404745 FT /transl_table=11 FT /locus_tag="DIP0441" FT /product="Putative membrane protein" FT /note="Similar to Streptococcus gordonii challis 29 kDa FT membrane protein in psaA 5'region SW:P29K_STRGC (P42361) FT (278 aa) fasta scores: E(): 3.8e-28, 38.25% id in 264 aa" FT /protein_id="CAE48946.1" FT /translation="MLTPIEFFQDLGNPALAFLPKALLVAVLSSIVCGVVGTHVVLRGM FT AFIGDAVSHAVFPGLAVAFALQISVLAGGAVAGVIVAILIAAFSQRRRLKEDSIIGIFF FT AAAFALGLIIISRVEGYTASLTSFLFGSITGVPDSDVVIAAIVGSIIVLVLIVLTPQLV FT AVSLDRETARTMGMPVLLLDLVLYLAVTAAVVISIRTIGNILVLALLITPAATARMLTD FT KLSTMMWLSALVGAIGSILGVYLSWALDYPTGATMVLVIFFIFLWSWMQSLGTIKTKKK FT DYYHHG" FT misc_feature 403924..404697 FT /note="HMMPfam hit to PF00950, ABC 3 transport family" FT misc_feature order(403924..403992,404011..404079,404089..404142, FT 404176..404244,404302..404370,404407..404475, FT 404488..404541,404560..404628,404641..404709) FT /note="9 probable transmembrane helices predicted for FT DIP0441 by TMHMM2.0" FT CDS 404738..406720 FT /transl_table=11 FT /locus_tag="DIP0442" FT /product="Putative membrane protein" FT /note="No significant database matches. Note: Also similar FT to DIP0439, DIP1724, DIP2325 and DIP0443" FT /protein_id="CAE48947.1" FT /translation="MAKITKVTSMLCCLAIVSLSMLPVSASEDAALDATGHKKGEPAFG FT VTIPKGTTYRDSDGKEVPHPCVDRKIGYQGHFDALYGTYNYSVKEPATDLPKLELMAVD FT GQQVVPQESLCFRLPPDAGEDGEELSRIRIPDDEEFSFLGKPGDIVWYAPQNIPFANGH FT RPIWAGIGAFDPHHEPKGKDSIPEHLDKNMYFELKDFSGPGDVNVFFKNNSRKEVERIF FT SSNDEELKTIEYEMGSHGHFNWTFSKPGIYELTWEAYVKNGAFKVKTEPVRQIWLVGSD FT EEVGLPEGTTTNLNKITKPLDKDATNEPPTDPSEKKKPPRPEKGHSETSSPSALDDSIE FT RAWKLTGTPKTIINDGHMDLALTRPDKEFVTVINREGKKYSSGDVTLAVPDSGGDQGGP FT LVKTDSWKDRIEAQISGSLPDQAWVLPESQDHKLPWVGFSNEDLPSDALLPDSKMTVSL FT NKVELPHDGRMISWHNGISGIDLLTDTDDLSKNLEYGLHAHDHQSMLFTKEGAYGLEYS FT FDITTASGKQESYPLHISYLVGDATIARAKEILAGEKLGGSLKKKPQEKETKKPASVQN FT KSGKHNKDTVGSESARKRQQLAATSGSDTNGIYSFHDGDVQDEAVTTAAEWQELDTWWT FT QLSALLGILGIVGAFVLFRKSMRNN" FT misc_feature 404738..404815 FT /note="Signal peptide predicted for DIP0442 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.840 between residues 26 and 27" FT misc_feature 406631..406699 FT /note="1 probable transmembrane helix predicted for DIP0442 FT by TMHMM2.0" FT CDS 406738..407592 FT /transl_table=11 FT /locus_tag="DIP0443" FT /product="Putative surface-anchored membrane protein" FT /note="No significant database matches. Note: Contains a FT potential sortase anchor site (LPDTG) upstream of the FT C-terminal region transmembrane domain. Also similar to FT DIP0439, DIP1724, DIP0442 and DIP2325" FT /protein_id="CAE48948.1" FT /translation="MKRFVYKLSALGLVMGMSISAPAAWAQSLVLETGHIDAFNVTAED FT GGLKLTLKEDVTGQHVLHDPQDVILKVKQEAMNEDVAKVAEIGKPGYLLPMAQDAGLIW FT PGWDTQGVREGGFSAIDINFKKVSGPGEVYMFKTGSFGGTESLLAGGSYELTSGSSIHQ FT DPPSHVHTNWVFTEPGTYTMCVQATGNGSSSNVGKYVWQVGDGGPNNVADCEGTAAPVA FT APASKGKSAPATSTKKAASAAKKQLPDTGPNFMTLSFIVLGLGLMVFGAGMVRLVRAGQ FT SGK" FT misc_feature 406738..406815 FT /note="Signal peptide predicted for DIP0443 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.994 between residues 26 and 27" FT misc_feature 407134..407181 FT /note="ScanRegExp hit to PS00225, Crystallins beta and FT gamma 'Greek key' motif signature." FT misc_feature 407404..407427 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 407476..407490 FT /note="potential sortase anchor site LPDTG" FT misc_feature 407500..407568 FT /note="1 probable transmembrane helix predicted for DIP0443 FT by TMHMM2.0" FT CDS 407597..408616 FT /transl_table=11 FT /locus_tag="DIP0444" FT /product="Putative membrane protein" FT /note="No significant database matches. Contains a lysine FT rich region close to the C-terminal end" FT /protein_id="CAE48949.1" FT /translation="MKKFIALTVMLAFGITPQAWADPATLDDVTVVNTWADRTGDQHPL FT AVIRGGVVTLSDKNSIIQETDTELIEHTSAEFVVVVPDAAKTKDQHWSLPAAGEPEDLV FT RDKMTRLVFETSEENAHARLGKMSGPGTMKFDKPVDMAAPGSYAQGVEFEKPGLYVAEI FT ILNNHSTVWKFYVGDAPVRPDYAGIKRGLADVQQSLRELTKEIEQASTPPSVVETEEPE FT AAEPAPVIPQEKPQSHSKPQQKPQPKPSHKPKEKKVKEKKEPKEDKKPDRKPAPKSERE FT STTHVKKAEEQDVRTAAEAIRKRGWWSGFLLGLGAMAMVGGIVFFSQAKNMKKQQGKI" FT misc_feature 407597..407659 FT /note="Signal peptide predicted for DIP0444 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.995 between residues 21 and 22" FT misc_feature 408314..408460 FT /note="ProfileScan hit to PS50318, Lysine-rich region." FT misc_feature 408509..408577 FT /note="1 probable transmembrane helix predicted for DIP0444 FT by TMHMM2.0" FT CDS 408621..409559 FT /transl_table=11 FT /locus_tag="DIP0445" FT /product="Putative membrane protein" FT /note="Low similarity to Mycobacterium leprae putative FT integral membrane protein ML2581 TR:Q9CD18 (EMBL:AL583926) FT (427 aa) fasta scores: E(): 2.5, 24.7% id in 344 aa" FT /protein_id="CAE48950.1" FT /translation="MLPTTRILSVLLLGLGVALVAVGILAPRWVNTDARLPLDLSQTTF FT TLVDDHARTRLINDGRVLDAGVVRQWHMDILPPTDADTATVRIGVTDVRKSRQADVDRL FT IQASVWTYPLDRLSGEALAPATVSAQLGSPTESVPVDGAWLKFPSDAQQTTYEVFDPTL FT RSTTPAVFSEEIDRGGRTIYRYSQEIKPTNVAEKYASVFNTTQKDENTLYLYHSGNRQW FT YVDQISGLVVDVEENIEDYFGDADGTRREDALIFHGRMSEDNKAALFEQASAVSDGSVA FT RVLYRVALAAGAVLSVVGLMGAFRRRPVALH" FT misc_feature 408621..408710 FT /note="Signal peptide predicted for DIP0445 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.417 between residues 30 and 31" FT misc_feature 408639..408707 FT /note="1 probable transmembrane helix predicted for DIP0445 FT by TMHMM2.0" FT CDS 409723..413250 FT /transl_table=11 FT /gene="rpoB" FT /locus_tag="DIP0446" FT /product="DNA-directed RNA polymerase beta chain" FT /EC_number="2.7.7.6" FT /note="Similar to Mycobacterium tuberculosis DNA-directed FT RNA polymerase beta chain RpoB or Rv0667 or MT0695 or FT MTCI376.08c SW:RPOB_MYCTU (P47766) (1178 aa) fasta scores: FT E(): 0, 75.86% id in 1181 aa" FT /protein_id="CAE48951.1" FT /translation="MVNIAGPPPREVLEGPILAVSRQTKANIPGAPERKSFAKITEPIE FT VPGLLDIQLNSFAWLIGTPEWRARQQEELGDSVRVTSGLEDILEELSPIQDYSGNMSLS FT LSEPRFEDMKNTIDECKDKDINYSAPLYVTAEFINNETQEIKSQTVFIGDFPMMTDKGT FT FIVNGTERVVVSQLVRSPGVYFDQTIDKSTERPLHSVKVIPSRGAWLEFDVDKRDTVGV FT RIDRKRRQPVTVLLKALGWTTEQITERFGFSEIMMSTLESDGVSNTDEALLEIYRKQRP FT GEQPTRDLAQSLLDNSFFRAKRYDLAKVGRYKVNRKLGLGGDNEGLMTLTEEDIATTLE FT YLVRLHAGETTMTSPTGEVIPVETDDIDHFGNRRLRTVGELIQNQVRVGLSRMERVVRE FT RMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQFMDQNNSLSGLTHKRRLSALGPG FT GLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIGSLASYARVNAFGFIETPYRKVE FT NGVLTDQIDYLTADEEDRFVVAQANVEHDADGKITADSVTVRVKNGDIQVVAPESVDYL FT DVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPFVGTGMERAAAYDA FT GDLIINKKGGVVENVSADIITVMADDGTRETYILRKFERTNQGTCYNQTPLVNIGDRVE FT AGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILNQRVVEEDILTSIHIEEHE FT IDARDTKLGPEEITREIPNVSEDVLKDLDERGIVRIGADVRDGDILVGKVTPKGETELT FT PEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRRFSRDDDDDLAPGVNEMIRVYVA FT QKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFMPDGTPVDIILNTHGVPRRMNIGQVLE FT VHLGWLAAAGWKIDTEDPANAELLKTLPEDLYDVPAGSLTATPVFDGATNEEIAGLLGN FT SRPNRDGDVMVDENGKATLFDGRSGEPFPYPVSVGYMYILKLHHLVDEKIHARSTGPYS FT MITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVVGRVKVYEAIVKG FT ENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELSGSDDDEFDQAGASLGINLSR FT DERSDADIA" FT misc_feature 410059..413007 FT /note="HMMPfam hit to PF00562, RNA polymerase beta subunit" FT misc_feature 412357..412395 FT /note="ScanRegExp hit to PS01166, RNA polymerases beta FT chain signature." FT CDS 413298..417308 FT /transl_table=11 FT /gene="rpoC" FT /locus_tag="DIP0447" FT /product="DNA-directed RNA polymerase beta' chain" FT /EC_number="2.7.7.6" FT /note="Similar to Mycobacterium tuberculosis DNA-directed FT RNA polymerase beta' chain RpoC or Rv0668 or MT0696 or FT MTCI376.07c SW:RPOC_MYCTU (P47769) (1316 aa) fasta scores: FT E(): 1.7e-205, 73.98% id in 1334 aa" FT /protein_id="CAE48952.1" FT /translation="MIDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDG FT LFCERIFGPTRDWECACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHI FT WYFKGVPSRLGYLLDLAPKDLERIIYFAANIITSVDDEARHADQTTLEAEMLLEKKDVE FT ADMESEIAERAAKLEEDLAELEAAGAKADARNKVKKAAEKEMQHIRERAEREIDRLEEI FT WQTFIKLAPKQMIIDETIYEELVDRYEDYFTGGMGAEAIQTLIRNFDLDSEAEELREII FT NNGKGQKKMRALKRLKVVAAFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDL FT NDLYRRVINRNNRLKRMIELGAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPL FT KSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMK FT RLVENDYAQNIKSAKRMVERQRPEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLV FT EGKAIQLHPLACEAFNADFDGDQMAVHLPLSAEAQAEARILMLASNNILSPASGKPLAM FT PRLDMVTGLYYLTMDKNENEIGGQGAYASATEEGPAQGVYSSYAEAIMARDRGVLGLQA FT KIKVRISHLRPPVDIEAEQFPEGWNKGDVWLADTTLGRIMFNELLPWNYPYLEGVMVRK FT GGGTGKIMLGDVINDLAATYPMITVAQTMDKMKDAGFYWATRSGVTITMSDVLVLPNKE FT EILDRYEAEARKIERKYWEQGALTERERYDRLVELWKDATDEVGNAVEKLYPDDNPIPM FT IVKSGAAGNMRQIWTLAGMKGMVVNSKGDYITRPIKTSFREGLSVLEYFNNSHGSRKGL FT ADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGIRVPVAVEVKDAEGNVTGYTGHS FT LIETSVAGRVAATAVKDAEGNVMVEPGENLTDQLIDELIAAGVKEVKVRSVLTCQTPTG FT VCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDITGGLPRVQ FT ELFEARVPKNRAPIASVAGTVHLDDEGNFYTLTINPDDGSDVVVYEKLSKRQGLATVRV FT PMESNPGAMIERTLAEGDHVEVGDRLLRGPADPHDVLEVLGRRGVEQHLVDEVQDVYRA FT QGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGTLVDLSEAKAANAEALANGGQPAEL FT RSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENVIIGKLIPAGT FT GISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGYGEFTGASVPLDEAYDL" FT misc_feature 414225..416054 FT /note="HMMPfam hit to PF00623, RNA polymerase alpha FT subunit" FT misc_feature 416241..417185 FT /note="HMMPfam hit to PF01854, RNA polymerase A/beta'/A'' FT subunit" FT CDS complement(417620..418336) FT /transl_table=11 FT /locus_tag="DIP0448" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor putative ABC FT transport system ATP-binding protein SCE41.20c TR:Q9F2N9 FT (EMBL:AL442120) (262 aa) fasta scores: E(): 2.4e-29, 44.49% FT id in 236 aa" FT /protein_id="CAE48953.1" FT /translation="MTALIAATGVKKSFGKGSQKVTVLKGIDLTILPGESVAIVGKSGS FT GKSTLLYCLSGLLAPDEGSIYLANQNITATSPRKVAEIRRNHASFIFQDLNLISSLTVA FT DNIRLPSKLAGRNPKKHEIDSVLEKVGLSGAGNKYPNQLSGGQQQRVAIARSLVRSPQI FT LFADEPTGALDVTTSAIILKLLQETVTKRTSLVMVTHDLDIAASADRVVVLKEGNTGQI FT LHHTTPTNIFDAMHKS" FT misc_feature complement(417683..418240) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(417686..418237) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(417695..417910) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(417866..417910) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(418154..418231) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(418193..418216) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(418336..420009) FT /transl_table=11 FT /locus_tag="DIP0449" FT /product="Putative ABC transport system integral membrane FT protein" FT /note="Low similarity to Staphylococcus aureus, ABC FT transporter VraE or SA2493 or SAV2702 TR:Q9KWJ6 FT (EMBL:AB035452) (626 aa) fasta scores: E(): 0.066, 21.03% FT id in 385 aa" FT /protein_id="CAE48954.1" FT /translation="MPQIFPSAQTEQNLGHFIVSSTALGIWEAHQVDLSQLGWHNFAIL FT IGYASCQIAIHEGNLTLSTSHYYYQLWCCGYIYRANHLADLRHLNGGTHMIFKIALNSV FT RKGIASWIALLVSSIALSVVLTLNVALIVAGAAVSGDAQQAYISMGGVALAFSVLTGLA FT SFRLVVDTCIRLQQREVALWQIAGLLPPTALAILFTEVVLVTAASAVVGTIITIIIWPS FT YASFVGHSGLPYSSVLEHNIPAPAISIGIAITVIVSILAGISSSRKIVRGDLITGVKAS FT SSFETKRGSVKGYIFTTTLGVAFLVGIIAIYSAIGNRTELTDPQEIGDFVTIYPGMGIL FT LCLVFAFLGPFLIRALVALIQLCPGKVSFFLAAREASARPALTKALVMPISLAASAVGV FT MASWVSKLKDILETVSEASSSVSAPPEQMALLLAGPIIAACVSASSIVFATASNREQDN FT ALLIVSGSTRSAAYTKALFETVVYAFISLFCAYFIIIANELAMVAAFSSGPIPSAQVSL FT PSWAATGVVTFGMSLTLLMLLTVTSTGFRKESITVVLESK" FT misc_feature complement(418342..418404) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(order(418393..418458,418504..418569, FT 418663..418728,418798..418863,418954..419019, FT 419065..419130,419212..419277,419338..419403, FT 419506..419571,419602..419667)) FT /note="10 probable transmembrane helices predicted for FT DIP0449 by TMHMM2.0" FT misc_feature complement(419068..419145) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(419212..419274) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature complement(419353..419415) FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT CDS 420167..420643 FT /transl_table=11 FT /locus_tag="DIP0450" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE48955.1" FT /translation="MQKQQHRIAAMVVAGTLLASSGQFAIANAAEKETEQAPATSTQGS FT SNLAHSTFKSETPEVQPYGVKGFIAKKSLQGISWLLRNTPKKFIERAGDTLDDGARKKI FT LQHSDEIADKIDEVAELPDLAHRTVKIKLTTALEPIVGTSYSLMIADVIAWLAL" FT misc_feature 420167..420253 FT /note="Signal peptide predicted for DIP0450 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.449 between residues 29 and 30" FT CDS 420648..420971 FT /transl_table=11 FT /locus_tag="DIP0451" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48956.1" FT /translation="MDNIEHRISQLELNQGRLAILLSSAPEEHKAWDKACLCHDLTFEQ FT EYRTRQEILDFLNSEATDSNELLSKVSHIVGHPAVARDLVSAFKQRGTAAQRWKEIDSE FT NLL" FT CDS complement(421023..421292) FT /transl_table=11 FT /locus_tag="DIP0452" FT /product="Putative transposase" FT /note="Low similarity to Corynebacterium jeikeium FT transposase A TnpA TR:AAK67709 (EMBL:AY036070) (105 aa) FT fasta scores: E(): 0.17, 32.63% id in 95 aa" FT /protein_id="CAE48957.1" FT /translation="MPKKFDQDAKDRVVRLVEDRILAENISTQEACKIVAPKLGVSWHT FT ARQWTQAARREGRVVELKALQRCTHQWSALIWENRKTKASNVEY" FT misc_feature complement(421140..421205) FT /note="Predicted helix-turn-helix motif with score 1309 FT (+3.65 SD) at aa 30-51, sequence EACKIVAPKLGVSWHTARQWTQ" FT CDS join(421535..422104,422104..426510) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0453" FT /product="Putative helicase (pseudogene)" FT /note="Pseudogene. Similar to Mycobacterium tuberculosis FT CDC1551 helicase, putative/conserved hypothetical protein FT MT2082 TR:AAK46361 (EMBL:AE007059) (1606 aa) fasta scores: FT E(): 2.1e-149, 57.16% id in 1662 aa. Contains a frameshift FT after residue 190" FT /db_xref="PSEUDO:CAE48958.1" FT misc_feature 423079..423336 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature 423211..423300 FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature 424015..424101 FT /note="FPrintScan hit to PR00142, RecA protein signature" FT misc_feature 424156..424206 FT /note="FPrintScan hit to PR00507, N12 class N6 FT adenine-specific DNA methyltransferase signature" FT misc_feature 424261..424305 FT /note="FPrintScan hit to PR00507, N12 class N6 FT adenine-specific DNA methyltransferase signature" FT misc_feature 424600..424638 FT /note="FPrintScan hit to PR00507, N12 class N6 FT adenine-specific DNA methyltransferase signature" FT misc_feature 424609..424629 FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT misc_feature 425374..425427 FT /note="FPrintScan hit to PR00142, RecA protein signature" FT CDS complement(426702..427061) FT /transl_table=11 FT /locus_tag="DIP0455" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Pseudomonas aeruginosa probable FT transcriptional regulator PA3689 TR:Q9HXV1 (EMBL:AE004788) FT (156 aa) fasta scores: E(): 2.1, 34.34% id in 99 aa" FT /protein_id="CAE48959.1" FT /translation="MNTFTACVERGENWWVAQLVEDPGVIVQARRLDQIQEEIRDALAL FT FPKLTDSPETASVHLDLVGEIEQKAQATRDQLAAIRECEAHELANMSQHARRLQAAGVL FT RDSMQIASGSQAARS" FT CDS complement(427246..427710) FT /transl_table=11 FT /locus_tag="DIP0456" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48960.1" FT /translation="MKIESSCPLPVKPGMTVAQATEACYQSELGADTYVEEFEGWVDIE FT ALEPGDPGRKIVCCVEDGICITVEMKYMELPITDTFYGVDLNCQPGEGWMTSLERVARA FT LEDKGLTVVKRDSYILLPDVFVAIEVGETIGWFDPAYWSREEFLEEAILA" FT CDS complement(427803..428210) FT /transl_table=11 FT /locus_tag="DIP0457" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48961.1" FT /translation="MKFTFEVPAPLQQVAPISYYESLLSNYRYRDISFLEMSTTGKILG FT ECTIGENNYTIQGSECDGLISSIEILDVKEADSFLDIPLSLPNRKFVKALKDLGIEFDH FT DRDGVTIHHENRVIALSYQFGKVAAICWDSE" FT CDS 428385..429611 FT /transl_table=11 FT /gene="cstS" FT /locus_tag="DIP0458" FT /product="Histidine kinase" FT /note="Almost identical to already sequenced FT Corynebacterium diphtheriae histidine kinase CstS TR:Q9RPE8 FT (EMBL:AF161328) (408 aa) fasta scores: E(): 2e-149, 97.3% FT id in 408 aa" FT /protein_id="CAE48962.1" FT /translation="MATFRFLTPSFWIQLVIQTIVAFVSLSFISATGLVGNFNISPTWQ FT TVLCICSYVGIALTYVGLLLQRWKPVSGVTTVTVGLIFVSVSLTYNFLAGYVVVCYEAW FT FISARIMRHRSRWLTALFVGSFGSIAFNLLFPILFFNVLETGRAVGIKEVIQEPQTWLF FT VAIVVTLVVVSIALFWQLGLSTKRKADELRDLRARAELAAVSERNRIAREMHDIVAHSL FT TVVIAQADGGRFAGRDNPQQALAALETISSVGREALSQMRGLLSVLRETDDRDVTAAPG FT IESVGTLIHEAELAGLDIHYEVVGEPQALDESRSLSVFRIVQECLTNVLKHAGTTRAWV FT VMDWSDPSVVRIKVDNEAGEALVDTQSTGKGLVGVRERALIHGGRARWGASISYVGGWY FT VEAEIPVKG" FT misc_feature order(428427..428495,428514..428582,428610..428678, FT 428736..428804,428862..428930) FT /note="5 probable transmembrane helices predicted for FT DIP0458 by TMHMM2.0" FT CDS 429616..430317 FT /transl_table=11 FT /gene="cstA" FT /locus_tag="DIP0459" FT /product="Response regulator" FT /note="Identical to previously sequenced Corynebacterium FT diphtheriae response regulator CstA TR:Q9RPE7 FT (EMBL:AF161328) (233 aa) fasta scores: E(): 4.9e-83, 99.57% FT id in 233 aa" FT /protein_id="CAE48963.1" FT /translation="MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAAN FT TPVDVILMDVQMPVMDGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLK FT DTAPEDLIAAVRTVGEQSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLT FT PREQEILLLIALGKSNTEIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLV FT APNQLLTHTQG" FT misc_feature 429619..429960 FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT misc_feature 429619..429984 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature 429622..429972 FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature 430090..430263 FT /note="HMMSmart hit to SM00421, helix_turn_helix, Lux FT Regulon" FT misc_feature 430090..430287 FT /note="HMMPfam hit to PF00196, Bacterial regulatory FT proteins, luxR family" FT misc_feature 430099..430143 FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature 430099..430251 FT /note="ProfileScan hit to PS50043, Helix-turn-helix domain, FT luxR and related types (substantial overlap with lysR FT type)." FT misc_feature 430141..430191 FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature 430144..430209 FT /note="Predicted helix-turn-helix motif with score 1227 FT (+3.37 SD) at aa 177-198, sequence KSNTEIAEELFISLPTVKTHVS" FT misc_feature 430189..430227 FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT CDS 430344..431318 FT /transl_table=11 FT /locus_tag="DIP0460" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor putative ABC FT transporter ATP-binding subunit 2SC6G5.39c TR:Q9K4B6 FT (EMBL:AL359152) (346 aa) fasta scores: E(): 9.6e-39, 44.02% FT id in 318 aa" FT /protein_id="CAE48964.1" FT /translation="MFSPPVVAMIDIMITVQDLGKTYGKKTAIAGLNFHVPDGQVTGFL FT GPNGSGKSTTMRCMLGLDTPTEGRVTFKSKSYNDEFARLSNKPSVAGAILDAGWFTPAR FT SGRSHLRVIARGAGISDARVEECLDYVGMREAAHQKVGGYSLGMKQRIGVAAALLGNPQ FT HLILDEPVNGLDPEGVSWMRNTIRDLASQGRSVLVSSHLLSEMQQTADRLVVIGKGKMI FT GEYTMSEFLADGTTVLVESPQAAQLCDALKNRGLAAAVQDTQVVIALENADDDPAVRAQ FT VAALALEYGIAVTRLETRQENLEQRFLAATQSVQEYRTSNAGN" FT misc_feature 430455..431003 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 430458..431000 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 430464..430529 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 430479..430502 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 430773..430817 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 430773..430988 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 431339..432106 FT /transl_table=11 FT /locus_tag="DIP0461" FT /product="Putative ABc transport system integral membrane FT protein" FT /note="Low similarity to Streptomyces coelicolor putative FT integral membrane protein SCBAC17A6.12c TR:CAC44657 FT (EMBL:AL596248) (387 aa) fasta scores: E(): 0.021, 30.04% FT id in 213 aa" FT /protein_id="CAE48965.1" FT /translation="MFFNALKSEWTKLMSLRSTAVYFILITGALYGPMVLLVGLADTSS FT GVDWSSLLVGWGIAVAISTAFAGASVAGELDDHMHAHAYLTQNSRSTWIAAKSVVYTVF FT LAITFAIGIGLAVAVAQVFPDSSFSGGETTDLFIALFHAIIFGSFAFAIGMLTRSKVAA FT VALPLAWMLVIDQLIPLAASKIEAATFLWLLSPRPRSGQLADTIAGTVETGMEHGFELG FT QIQPDWFNVAVIAGWVIVATVSVFAVNRVRDVR" FT misc_feature order(431399..431467,431495..431563,431636..431704, FT 431747..431806,431819..431887,432020..432088) FT /note="6 probable transmembrane helices predicted for FT DIP0461 by TMHMM2.0" FT CDS 432122..432793 FT /transl_table=11 FT /locus_tag="DIP0462" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE48966.1" FT /translation="MKQTAQTHVFIVGALGITMTYLALTGRINNYLQPSFRPVSLATGL FT VLVALALWSAVRPNSFSSRRTSWFLLVPVCVVAVFAPAALGAATLNSSGVNRVVGNNLD FT DLALPKLAKDQTNPMTMEELTTRFLRSDSATFDGTVVEVQGFASAAADGTWRLSRYKIY FT CCAADAMAYTATLETSTSMSSDQWYRVRGVVRVSSAHNPQFPMIEVHNLEAIDTPTEPY FT L" FT misc_feature order(432140..432208,432236..432289,432323..432391) FT /note="3 probable transmembrane helices predicted for FT DIP0462 by TMHMM2.0" FT CDS 432790..433728 FT /transl_table=11 FT /locus_tag="DIP0463" FT /product="Putative membrane protein" FT /note="Similar to Streptococcus pyogenes hypothetical FT protein SPY0576 TR:Q9A0X1 (EMBL:AE006514) (300 aa) fasta FT scores: E(): 2.3e-31, 36.93% id in 287 aa" FT /protein_id="CAE48967.1" FT /translation="MKKVVIGWAGIIAALVLGPIIQLKGQAEAWSQISTSIVLQAVPFL FT VLGVIISAVIEVFVPQAAFRRLPRNEKAAVPVAAASGFLLPACECASVPVTQSLVHRGV FT PPAAALAFLLASPAINPVVLVSTAVAFGGDLRMMIARLCASLIAAIIVGWVWISARLDI FT ALDSEHTHCHGHGNAWDRFRESCMHDLLNAGGFLVIGAMLAAVMKVLIPVDVITAVGTR FT PLIACLIMATLAIVISLCSEADAFVAASLTMMPATAQLVFLVVGPMVDVKLIAMQQGAW FT GRGFVTRFVPLTLLVAITVAIGVGSISFGDI" FT misc_feature 432790..432876 FT /note="Signal peptide predicted for DIP0463 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.616 between residues 29 and 30" FT misc_feature order(432802..432855,432898..432966,433117..433185, FT 433198..433266,433360..433428,433441..433509, FT 433528..433596,433639..433707) FT /note="8 probable transmembrane helices predicted for FT DIP0463 by TMHMM2.0" FT CDS complement(433725..434228) FT /transl_table=11 FT /locus_tag="DIP0464" FT /product="Conserved hypothetical protein" FT /note="Low similarity to the central part of Alcaligenes FT eutrophus NrdG protein TR:Q9ZER3 (EMBL:AJ012479) (256 aa) FT fasta scores: E(): 6.4e-13, 37.5% id in 168 aa" FT /protein_id="CAE48968.1" FT /translation="MRCVYCHNAQLQEFAPGAVGVDDLVGLARRRIGLIDAVVISGGEP FT TAVPGLAEAICRIHDLGLPVGLHTCGYAPKRLATLVSQPESRPDWIGLDIKALPRHMHE FT ITGCSPRVAQSCWESLAIIDAVGIEVQTRTTLWPGSVIEQNLRELEVMVAAQGHELVVQ FT QARF" FT misc_feature complement(434205..434222) FT /note="ScanRegExp hit to PS00190, Cytochrome c family FT heme-binding site signature." FT CDS complement(434314..436098) FT /transl_table=11 FT /locus_tag="DIP0465" FT /product="Conserved hypothetical protein" FT /note="Similar to C-terminal region of Alcaligenes FT eutrophus NrdD protein TR:Q9ZER4 (EMBL:AJ012479) (676 aa) FT fasta scores: E(): 1.4e-167, 71.81% id in 550 aa" FT /protein_id="CAE48969.1" FT /translation="MSDSQINSRTTIDEYLSRADWRVNANANQDYSLGGMILNAAGKVT FT ANYWLDQVFSPAASAAHREGSIHIHDLDMLSGYCAGWSLRQLLEEGFGGVPGTISSRPP FT KHFSSACGQIVNFLGTLQNEWAGAQAFSSFDTYMAPFVRLDNLSYDEIVQDMQEFIFNL FT NVPSRWGTQTPFTNLTFDWTCPADLKDSVPFIGEEPVDFTYGELQEEMDLINRAFIQVM FT SAGDADGRPFTFPIPTYNITKDFDWDSPNTEALFTMTAKYGLPYFQNFINSDLDPGMIR FT SMCCRLQLDLRELLKRGNGLFGSAELTGSIGVVTLNCARLGYLYAGDEQALLGAVDELI FT ELGIDTLERRRDFVATHMRQGLYPYSARWLPSLDNHFSTIGVNGCNEMIRNFTHDAYNL FT TDPQGHAQVARLLDHINARLVQAQERTGHLFNLEATPAEGTTYRLAKEDLKRYPDMLHA FT GTPEEPYYTNSSQLPVSHTPDPFEALALQEDLQSKYTGGTVLHLYMGAAMSDGKACAAL FT VRRALTNFHLPYITITPTFSICPDHGYISGEHPECPQCGATTEMWTRVMGYFRPVQSFN FT TGKKGEFHERTYFAEALI" FT CDS 436256..436609 FT /transl_table=11 FT /locus_tag="DIP0466" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE48970.1" FT /translation="MAHPLFIAVDDSILDELRIKDDELLEQLFSGALGDPVTIGSAWVD FT VEEQLRTAGFRGFAVRGCEVIVGDPMVGLVPSERVEEMLDSLASLSGEAVGVLTDLYRS FT ARAAGQSVVIISE" FT CDS 436884..437255 FT /transl_table=11 FT /gene="rpsL" FT /locus_tag="DIP0467" FT /product="30S ribosomal protein S12" FT /note="Similar to Mycobacterium intracellulare 30S FT ribosomal protein S12 RpsL SW:RS12_MYCIT (P33565) (124 aa) FT fasta scores: E(): 5.8e-43, 92.68% id in 123 aa" FT /protein_id="CAE48971.1" FT /translation="MPTIQQLVRKGRHDKTAKVATAALKGSPQRRGVCTRVYTTTPKKP FT NSALRKVARVRLTSGIEVSAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGALDT FT QGVKDRKQARSRYGAKKEK" FT misc_feature 436884..437252 FT /note="HMMPfam hit to PF00164, Ribosomal protein S12" FT misc_feature 436953..437246 FT /note="BlastProDom hit to PD000576, PD000576" FT misc_feature 436962..437009 FT /note="FPrintScan hit to PR01034, Ribosomal protein S12 FT signature" FT misc_feature 437007..437054 FT /note="FPrintScan hit to PR01034, Ribosomal protein S12 FT signature" FT misc_feature 437010..437033 FT /note="ScanRegExp hit to PS00055, Ribosomal protein S12 FT signature." FT misc_feature 437055..437114 FT /note="FPrintScan hit to PR01034, Ribosomal protein S12 FT signature" FT misc_feature 437112..437165 FT /note="FPrintScan hit to PR01034, Ribosomal protein S12 FT signature" FT misc_feature 437163..437213 FT /note="FPrintScan hit to PR01034, Ribosomal protein S12 FT signature" FT misc_feature 437211..437249 FT /note="FPrintScan hit to PR01034, Ribosomal protein S12 FT signature" FT CDS 437259..437726 FT /transl_table=11 FT /gene="rpsG" FT /locus_tag="DIP0468" FT /product="30S ribosomal protein S7" FT /note="Similar to Mycobacterium smegmatis 30S ribosomal FT protein S7 RpsG SW:RS7_MYCSM (P41193) (155 aa) fasta FT scores: E(): 7.4e-49, 82.46% id in 154 aa" FT /protein_id="CAE48972.1" FT /translation="MRKNAAPKRPIVKDPVYGSEVVTQLVNKVLLDGKKSTAERIVYGA FT LDKCKEKTGIDPVLTLEKALGNIKPDLEVRSRRVGGATYQVPVEVRPARANTLALRWLV FT TFTRQRRENTMIERLANEILDAANGLGASVKRREDTHKMAEANRAFAHYRW" FT misc_feature 437259..437723 FT /note="HMMPfam hit to PF00177, Ribosomal protein S7p/S5e" FT misc_feature 437313..437393 FT /note="ScanRegExp hit to PS00052, Ribosomal protein S7 FT signature." FT misc_feature 437313..437723 FT /note="BlastProDom hit to PD000817, PD000817" FT CDS 437925..440105 FT /transl_table=11 FT /gene="fusA" FT /gene_synonym="fus" FT /gene_synonym="far" FT /locus_tag="DIP0469" FT /product="elongation factor G" FT /note="Similar to Escherichia coli elongation factor G FusA FT or Fus or Far or B3340 or Z4698 or ECS4191 SW:EFG_ECOLI FT (P02996) (703 aa) fasta scores: E(): 2e-149, 58.32% id in FT 703 aa, and to Mycobacterium tuberculosis elongation factor FT G FusA or Rv0684 or MT0712 or MTV040.12 or MTCY210.01 FT SW:EFG_MYCTU (O53790) (701 aa) fasta scores: E(): 4.7e-200, FT 74.57% id in 704 aa" FT /protein_id="CAE48973.1" FT /translation="MSEETKVCSLRLHKLGTTVAQEVLKDLNKVRNIGIMAHIDAGKTT FT TTERILFYTGINRKVGETHDGASTTDWMEQEKERGITITSAAVTCFWNGNQVNIIDTPG FT HVDFTVEVERSLRVLDGAVAVFDGKEGVEPQSEQVWRQAAKYDVPRICFVNKMDKLGAD FT FYFTVQTIIDRLGAKPLVMQLPIGAEDDFDGVVDLLEMKAITWRGKVETGAEPVIEEIP FT ADLADKAAEYREKLVETVAESDEALMEKYFGGEELTIEELKAGIRKLTVNSEVYPVLCG FT TAYRNKGVQPLLDAVIDYLPTPLDIGEVHGHKVGDETVDLVRKPSVDEPFSALAFKIAA FT HPFFGKLTFVRVYSGIVEPGAQVANSTKGKNERIGKLFQMHANKENPVDEARAGNIYAF FT IGLKDTTTGDTLCDKNDQIILESMDFPDPVIKVSIEPKTKSDQEKLGTAIQKLSEEDPT FT FTVELDEESGQTVIGGMGELHLDVLVDRMKREFKVEANVGNPQVAYRETIRKPVEKLEY FT THKKQTGGSGQFAKVIIGIEPYAPEAETLEEGESATYKFENAVTGGRVPKEYIPSVDAG FT IQDAMQYGYLAGFPLVNIKATLIDGAYHEVDSSEMAFKLAGSQALKEAVAKAKPVLLEP FT LMAVEVITPEEYMGDVIGDINSRRGQVSAMDDRAGAKVVKAKVPLSEMFGYVGDLRSRT FT QGRANYTMIFDSYAEVPTNVAAEIVAERNGTA" FT misc_feature 438006..438836 FT /note="HMMPfam hit to PF00009, Elongation factor Tu family" FT misc_feature 438018..438059 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 438033..438056 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 438135..438182 FT /note="ScanRegExp hit to PS00301, GTP-binding elongation FT factors signature." FT misc_feature 438156..438182 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 438216..438248 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 438264..438299 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 438372..438401 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 438921..439160 FT /note="HMMPfam hit to PF03144," FT misc_feature 439545..440066 FT /note="HMMPfam hit to PF00679, Elongation factor G FT C-terminus" FT CDS 440423..441613 FT /transl_table=11 FT /gene="tuf" FT /locus_tag="DIP0470" FT /product="Elongation factor Tu" FT /note="Similar to Corynebacterium glutamicum elongation FT factor Tu Tuf SW:EFTU_CORGL (P42439) (396 aa) fasta scores: FT E(): 1.9e-143, 93.93% id in 396 aa" FT /protein_id="CAE48974.1" FT /translation="MAKAKFERTKPHVNIGTIGHVDHGKTTTTAAITKVLADAYPELNE FT AFAFDAIDKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGA FT ILVVAATDGPMPQTREHVLLARQVGVPYILVALNKCDMVDDEEIIELVEMEIRELLAEQ FT DYDEEAPIIHISALKALEGDEKWTQSIIDLMQACDDSIPDPERETDKPFLMPIEDIFTI FT TGRGTVVTGRVERGSLKVNEDVEIIGIREKATTTTVTGIEMFRKLLDYTEAGDNCGLLL FT RGVKREDVERGQVVVKPGAYTPHTEFEGSVYVLSKDEGGRHTPFFDNYRPQFYFRTTDV FT TGVVKLPEGTEMVMPGDNVDMSVTLIQPVAMDEGLRFAIREGSRTVGAGRVTKIIK" FT misc_feature 440450..441037 FT /note="HMMPfam hit to PF00009, Elongation factor Tu family" FT misc_feature 440462..440503 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 440477..440500 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 440579..440626 FT /note="ScanRegExp hit to PS00301, GTP-binding elongation FT factors signature." FT misc_feature 440600..440626 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 440660..440692 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 440708..440743 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 440819..440848 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 441071..441310 FT /note="HMMPfam hit to PF03144," FT misc_feature 441320..441607 FT /note="HMMPfam hit to PF03143," FT CDS 441718..442248 FT /transl_table=11 FT /locus_tag="DIP0471" FT /product="Conserved hypothetical protein" FT /note="Similar to N-terminal region of Bacillus halodurans FT BH2297 protein TR:Q9KAJ0 (EMBL:AP001515) (232 aa) fasta FT scores: E(): 1.5e-08, 30.82% id in 146 aa" FT /protein_id="CAE48975.1" FT /translation="MLEQLTIDPWRIPVVVLSAVGTYIGFLALVKIFGTRVLAKMTAFD FT AVVLVMFGAVAGRVTIGHPPTLAAGLIGLSTLMLLEAIFGQIRRFSRFQHTLNGRSHVV FT MAHGEIITEQLRKTRLSYSDVRLAVRRAGLASLSQVQCMILEPTGDLSVIREGVPMDPE FT LLKNVAGVEYIYP" FT misc_feature order(441745..441807,441844..441903,441913..441972) FT /note="3 probable transmembrane helices predicted for FT DIP0471 by TMHMM2.0" FT CDS 442760..443065 FT /transl_table=11 FT /gene="rpsJ" FT /gene_synonym="rpsX" FT /locus_tag="DIP0472" FT /product="30S ribosomal protein S10" FT /note="Similar to Mycobacterium tuberculosis 30S ribosomal FT protein S10 RpsJ or RpsX or Rv0700 or MT0727 or MTCY210.19 FT SW:RS10_MYCTU (P95048) (101 aa) fasta scores: E(): 1.7e-35, FT 94.05% id in 101 aa" FT /protein_id="CAE48976.1" FT /translation="MAGQKIRIRLKAYDHEAIDASAKKIVETVTRTGARVVGPVPLPTE FT KNVYAVIRSPHKYKDSREHFEMRTHKRLIDILDPTPKTVDALMRIDLPASVDVNIQ" FT misc_feature 442769..443035 FT /note="BlastProDom hit to PD001272, PD001272" FT misc_feature 442772..442813 FT /note="FPrintScan hit to PR00971, Ribosomal protein S10 FT family signature" FT misc_feature 442772..443059 FT /note="HMMPfam hit to PF00338, Ribosomal protein S10p/S20e" FT misc_feature 442844..442891 FT /note="ScanRegExp hit to PS00361, Ribosomal protein S10 FT signature." FT misc_feature 442877..442924 FT /note="FPrintScan hit to PR00971, Ribosomal protein S10 FT family signature" FT misc_feature 442940..442984 FT /note="FPrintScan hit to PR00971, Ribosomal protein S10 FT family signature" FT CDS 443098..443754 FT /transl_table=11 FT /gene="rplC" FT /locus_tag="DIP0473" FT /product="50S ribosomal protein L3" FT /note="Similar to Mycobacterium bovis 50S ribosomal protein FT L3 RplC SW:RL3_MYCBO (O06044) (217 aa) fasta scores: E(): FT 1.1e-51, 66.5% id in 212 aa" FT /protein_id="CAE48977.1" FT /translation="MSETEIKGILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTV FT ETDGYNAIQIAYGEIDPRKANKPAAGHFKKAGVTPRRHVAEIRMDDVSGYELGQDVTVE FT IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKG FT TRMAGRMGSDRVTTQNLKVQKIDADANLILIKGAIPGVRGGIVTVKTAVKGGAHA" FT misc_feature 443119..443727 FT /note="BlastProDom hit to PD001374, PD001374" FT misc_feature 443134..443724 FT /note="HMMPfam hit to PF00297, Ribosomal protein L3" FT misc_feature 443413..443484 FT /note="ScanRegExp hit to PS00474, Ribosomal protein L3 FT signature." FT CDS 443751..444404 FT /transl_table=11 FT /gene="rplD" FT /locus_tag="DIP0474" FT /product="50S ribosomal protein L4" FT /note="Similar to Mycobacterium smegmatis 50S ribosomal FT protein L4 RplD SW:RL4_MYCSM (O06114) (215 aa) fasta FT scores: E(): 4.4e-57, 70.75% id in 212 aa" FT /protein_id="CAE48978.1" FT /translation="MTNLKLDVLTAEGKTDGQVELPAEIFDREASVALLHQVVNAQLAA FT KRQGTHSAKTRAEVSGGGRKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTP FT KKMIKAALFGALTDRARHERIHVISELVAGQTPSTKSARSFIERITDRRNVLLVVGRED FT VTAQKSARNLPGVHILFADQLNTYDVLYSDDVVFSVEALNTFINRASGAAQEEK" FT misc_feature 443802..444374 FT /note="HMMPfam hit to PF00573, Ribosomal protein L4/L1 FT family" FT CDS 444404..444709 FT /transl_table=11 FT /gene="rplW" FT /locus_tag="DIP0475" FT /product="50S ribosomal protein L23" FT /note="Similar to Mycobacterium bovis 50S ribosomal protein FT L23 RplW SW:RL23_MYCBO (O06046) (100 aa) fasta scores: E(): FT 2e-26, 72% id in 100 aa" FT /protein_id="CAE48979.1" FT /translation="MAKIADPRDIILAPVVSEKSYGLMEQNTYAFFVAPTANKTEIKIA FT IEQIFGVKVDSVNTANRAGKRKRSRTGYGVRKATKRAYVTLREGSDAIDIFGGNAA" FT misc_feature 444425..444700 FT /note="HMMPfam hit to PF00276, Ribosomal protein L23" FT misc_feature 444428..444670 FT /note="BlastProDom hit to PD001141, PD001141" FT CDS 444731..445573 FT /transl_table=11 FT /gene="rplB" FT /locus_tag="DIP0476" FT /product="50S ribosomal protein L2" FT /note="Similar to Mycobacterium bovis 50S ribosomal protein FT L2 RplB SW:RL2_MYCBO (O06047) (280 aa) fasta scores: E(): FT 4.4e-90, 81.42% id in 280 aa" FT /protein_id="CAE48981.1" FT /translation="MAIRKYKPTTPGRRQSSVSMFEEITRSTPEKSLVRPLPKKGGRNV FT HGHITVRHKGGGHKRQYRLIDFRRNDKDGIPAKVAHIEYDPNRTANIALLHYVDGEKRY FT IIAPKGLQQGQMIESGVNADIKVGNNLPLRNIPAGTTIHCVELKPGAGAKLARSAGASI FT QLLGKAGKYAVLRMPSSEIRRVDIRCRATVGEVGNADQINIRWGKAGRMRWKGVRPTVR FT GVVMNPVDHPHGGGEGKTSGGRHPVSPWGKKEGRTRNPNRYSNNMIVQRRRTNKSKKR" FT misc_feature 444854..445552 FT /note="HMMPfam hit to PF00181, Ribosomal Proteins L2" FT misc_feature 445385..445420 FT /note="ScanRegExp hit to PS00467, Ribosomal protein L2 FT signature." FT CDS 445590..445868 FT /transl_table=11 FT /gene="rpsS" FT /locus_tag="DIP0477" FT /product="30S ribosomal protein S19" FT /note="Similar to Mycobacterium tuberculosis 30S ribosomal FT protein S19 RpsS or Rv0705 or MT0732 or MTCY210.24 FT SW:RS19_MYCTU (P48947) (93 aa) fasta scores: E(): 7.9e-34, FT 89.13% id in 92 aa" FT /protein_id="CAE48982.1" FT /translation="MPRSLKKGPFVDEHLLNKVDAQNEKGTKQVIKTWSRRSTILPDFI FT GHTFAVHDGRKHVPVFVDDSMVGHKLGEFAPTKTFKGHIKDDKKGRR" FT misc_feature 445596..445838 FT /note="BlastProDom hit to PD001012, PD001012" FT /note="HMMPfam hit to PF00203, Ribosomal protein S19" FT misc_feature 445686..445745 FT /note="FPrintScan hit to PR00975, Ribosomal protein S19 FT family signature" FT misc_feature 445746..445784 FT /note="FPrintScan hit to PR00975, Ribosomal protein S19 FT family signature" FT misc_feature 445746..445820 FT /note="ScanRegExp hit to PS00323, Ribosomal protein S19 FT signature." FT misc_feature 445782..445829 FT /note="FPrintScan hit to PR00975, Ribosomal protein S19 FT family signature" FT CDS 445872..446234 FT /transl_table=11 FT /gene="rplV" FT /locus_tag="DIP0478" FT /product="50S ribosomal protein L22" FT /note="Similar to, although shorter than, Streptococcus FT pneumoniae 50S ribosomal protein L22 RplV or SP0214 FT SW:RL22_STRPN (Q9WVU5) (114 aa) fasta scores: E(): 1e-22, FT 64.28% id in 112 aa" FT /protein_id="CAE48984.1" FT /translation="MSEAITSARATARFVRVSPMKARRVIDLVRGKSVEEALAILKYAP FT QAASEPVAKVVASAAANAENNFGLDRRSLVVSEAFADEGPTMRRFSPRAQGRAFQIRKR FT TSHITIVVESQKEGAK" FT misc_feature 445899..446213 FT /note="HMMPfam hit to PF00237, Ribosomal protein L22p/L17e" FT misc_feature 445944..446216 FT /note="BlastProDom hit to PD001032, PD001032" FT misc_feature 446133..446207 FT /note="ScanRegExp hit to PS00464, Ribosomal protein L22 FT signature." FT CDS 446234..446980 FT /transl_table=11 FT /gene="rpsC" FT /locus_tag="DIP0479" FT /product="30S ribosomal protein S3" FT /note="Similar to, although shorter than, Mycobacterium FT bovis 30S ribosomal protein S3 RpsC SW:RS3_MYCBO (O06048) FT (274 aa) fasta scores: E(): 5.7e-67, 75.73% id in 239 aa" FT /protein_id="CAE48985.1" FT /translation="MGQKIHPHGLRLGITSDWKSHWYADKNYAEYLAEDIRVREYLVKT FT LDRAGIADVVIERTRERVRVDIHTARPGIVIGRRGSEADRLRTSLEKLTGKQVALNILE FT VKNIDANAQLVAQSIAEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMS FT RTERYHEGRVPLHTLRAEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAER FT RGRGDRNGRPRRGGQRRQRSEQKQEG" FT misc_feature 446237..446416 FT /note="HMMPfam hit to PF00417, Ribosomal protein S3, FT N-terminal domain." FT misc_feature 446345..446551 FT /note="ProfileScan hit to PS50823, Type-2 KH domain FT profile." FT misc_feature 446408..446605 FT /note="HMMSmart hit to SM00322, K homology RNA-binding FT domain" FT misc_feature 446423..446566 FT /note="HMMPfam hit to PF00013, KH domain" FT misc_feature 446585..446839 FT /note="HMMPfam hit to PF00189, Ribosomal protein S3, FT C-terminal domain." FT misc_feature 446720..446824 FT /note="ScanRegExp hit to PS00548, Ribosomal protein S3 FT signature." FT CDS 446984..447400 FT /transl_table=11 FT /gene="rplP" FT /locus_tag="DIP0480" FT /product="50S ribosomal protein L16" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L16 RplP or Rv0708 or MT0735 or MTCY210.27 FT SW:RL16_MYCTU (P95056) (138 aa) fasta scores: E(): 7.9e-39, FT 71.01% id in 138 aa" FT /protein_id="CAE48987.1" FT /translation="MLIPKRVKYRRQHRPHRSGVSKGGNRITFGDYGIQALEPAYITNR FT QIESARIAINRHVKRGGKVWINIFPDRPLTQKPLGVRMGSGKGPVEKWVANVKPGRILF FT EMSFPNEEVALEALRRAGQKLPCKVRIVKKEDQF" FT misc_feature 446984..447379 FT /note="HMMPfam hit to PF00252, Ribosomal protein L16" FT misc_feature 447053..447091 FT /note="FPrintScan hit to PR00060, Ribosomal protein L16 FT signature" FT misc_feature 447107..447142 FT /note="FPrintScan hit to PR00060, Ribosomal protein L16 FT signature" FT misc_feature 447155..447244 FT /note="FPrintScan hit to PR00060, Ribosomal protein L16 FT signature" FT misc_feature 447227..447262 FT /note="ScanRegExp hit to PS00701, Ribosomal protein L16 FT signature 2." FT misc_feature 447245..447334 FT /note="FPrintScan hit to PR00060, Ribosomal protein L16 FT signature" FT CDS 447400..447630 FT /transl_table=11 FT /gene="rpmC" FT /locus_tag="DIP0481" FT /product="50S ribosomal protein L29" FT /note="Similar to Mycobacterium bovis 50S ribosomal protein FT L29 RpmC SW:RL29_MYCBO (O06050) (75 aa) fasta scores: E(): FT 1.1e-12, 67.16% id in 67 aa" FT /protein_id="CAE48990.1" FT /translation="MANGTPAHELRELNAEELKTRLTEAKEELFNLRFQAATGQLTNNR FT RLRTVKRDIARIYTVIRERELGLSEVPGAEA" FT misc_feature 447418..447606 FT /note="HMMPfam hit to PF00831, Ribosomal L29 protein" FT misc_feature 447526..447570 FT /note="ScanRegExp hit to PS00579, Ribosomal protein L29 FT signature." FT CDS 447633..447911 FT /transl_table=11 FT /gene="rpsQ" FT /locus_tag="DIP0482" FT /product="30S ribosomal protein S17" FT /note="Similar to, although shorter than, Mycobacterium FT bovis 30S ribosomal protein S17 RpsQ SW:RS17_MYCBO (O06051) FT (136 aa) fasta scores: E(): 7.3e-19, 71.42% id in 84 aa" FT /protein_id="CAE48991.1" FT /translation="MSEANVNKKEKGARKVRTGYVVSDKMQKTIVVELEDRKSHAKYGK FT TIRTNSKVKAHDEKEIAGIGDLVRIEETRPLSKDKHFRLVEIVEKAK" FT misc_feature 447687..447893 FT /note="BlastProDom hit to PD001295, PD001295" FT /note="HMMPfam hit to PF00366, Ribosomal protein S17" FT misc_feature 447729..447800 FT /note="FPrintScan hit to PR00973, Ribosomal protein S17 FT family signature" FT misc_feature 447825..447857 FT /note="FPrintScan hit to PR00973, Ribosomal protein S17 FT family signature" FT misc_feature 447825..447863 FT /note="ScanRegExp hit to PS00056, Ribosomal protein S17 FT signature." FT misc_feature 447855..447878 FT /note="FPrintScan hit to PR00973, Ribosomal protein S17 FT family signature" FT CDS 448082..449719 FT /transl_table=11 FT /locus_tag="DIP0483" FT /product="Putative secreted protein" FT /note="C-terminal region presents los similarity to FT Streptococcus pneumoniae hypothetical protein SP0785 FT TR:AAK74922 (EMBL:AE007385) (399 aa) fasta scores: E(): FT 4e-08, 28.25% id in 315 aa" FT /protein_id="CAE48993.1" FT /translation="MVKKIVIPASIAALVALGGGATYFLTAGSSDPVVGASDYAVVEKK FT EVSQSINLSGTLGPKRDVVLASKLTGPVEALNVKVGDRIETGQVLAQINTDNERGELNA FT NYAQQAQNYAQSMAAVEQAQLQYQQTWDALHQGLNGEVNGAENALHAADHEYAEAKKLF FT EDSLHNRNAGIDDALKAQANAVNSARDGVETASLDAVRASFSALGTALNGASEDATDTA FT QKLQQQRASKLNTQAIEQGIAAVDSVNRARQAWDALNREQKNYEDALVKVDQSLATQQR FT AVAKAFAARNDAARGLETARLQANNQLATQSQAVDQAIRAADAGNAVAAVANRKLELSI FT GEASVRAPIRGVVTSVTGQVGKPVEGALLTIADDTDMLVRGTVSEADVAKIKVGNEVSF FT TTPATGTKQFKGRVSAVSTAAESNAGEPEKKTKKAQFPIEITVSGDRDGLLLGGSGKAK FT IVTAKSKPGLAVPKEAVFEEDGTSYVLAIDGSDEGTKVLKKVAVTLGKGNDFETTVESK FT DLKAQDLVIKAPDLYKNYEGVSVSVDKR" FT misc_feature 448082..448189 FT /note="Signal peptide predicted for DIP0483 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.875 between residues 36 and 37" FT misc_feature 448514..449077 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT CDS 449736..450452 FT /transl_table=11 FT /locus_tag="DIP0484" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Bacillus subtilis YknY protein TR:O31711 FT (EMBL:Z99111) (230 aa) fasta scores: E(): 3.2e-43, 57.01% FT id in 221 aa" FT /protein_id="CAE48994.1" FT /translation="MAEQLIKMRGIVKRFNIGQPGELQVLHGCDFDVTEGEFVSVVGTS FT GSGKSTLMNIVGLLDRPTAGSYLFNGVNVLESNDDELSRYRSKSIGFVFQNFNLIGRID FT ALKNVELPMMYAGVSRKERQTRAEELLELVGMADRMRHQPNELSGGQKQRVAIARALAN FT DPHLLLADEPTGALDTATGRVVMDLFHTLNQEHGKTIVFITHNPELAAETTRVATMRDG FT MFVDEDIFHFHTTGQQ" FT misc_feature 449838..450425 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 449841..450401 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 449847..449903 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 449862..449885 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 450174..450218 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 450174..450392 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 450449..451759 FT /transl_table=11 FT /locus_tag="DIP0485" FT /product="Putative ABC transport system integral membrane FT protein" FT /note="Similar to Bacillus halodurans BH3121 protein FT TR:Q9K885 (EMBL:AP001517) (398 aa) fasta scores: E(): FT 4e-20, 33.33% id in 438 aa" FT /protein_id="CAE48995.1" FT /translation="MSVLESVSLALGSLRTNKMRSALTLLGVIIGIASVIAILTLGHAL FT KTQTTSGLEGIGINDYNADVRERTPEGEPEPEGFNFGPPVTEPDALITPEMIDDLRSQF FT GPDISEIQVGGYGGTPATASTDLDANKELKGVVRGINVDYQRTKSVKIGWGREITDEDI FT DGDRPVAVVPEKLATSFYGSDPAAALGNSVTIETDFGTADFQIVGVTKKPEEKGGLLSF FT SDNEVEILVPYPSEAKVAEISGVFPGISIRLASPTGGSQTERNEHDAQVKKRLQAFFDE FT RYQDNKDYKVKVTDQKQDLASVNKILTSISAAIAAIGGISLLVGGIGVMNIMLITVTER FT TREIGVRKALGATRRDIRLQFVVEAMIVCLMGGLLGVIFGGAVGMLGAKLMGEFVFPPL FT SGIVISLVFSLAIGLFFGSYPAGKAAKLNPIEALRYE" FT misc_feature 450449..450586 FT /note="Signal peptide predicted for DIP0485 by SignalP 2.0 FT HMM (Signal peptide probability 0.773) with cleavage site FT probability 0.391 between residues 46 and 47" FT misc_feature order(450509..450577,451385..451453,451532..451600, FT 451628..451696) FT /note="4 probable transmembrane helices predicted for FT DIP0485 by TMHMM2.0" FT misc_feature 451016..451747 FT /note="HMMPfam hit to PF02687, Predicted permease" FT CDS 451955..452323 FT /transl_table=11 FT /gene="rplN" FT /locus_tag="DIP0486" FT /product="50S ribosomal protein L14" FT /note="Similar to Bacillus stearothermophilus 50S ribosomal FT protein L14 RplN SW:RL14_BACST (P04450) (122 aa) fasta FT scores: E(): 7.5e-35, 77.04% id in 122 aa" FT /protein_id="CAE48996.1" FT /translation="MIQQESRLRVADNTGAREILCIRVLGGSTRRFAGIGDVIVATVKE FT ATPGGNVKAGEVVKAVIVRAKKETRRPDGSYIKFDENAAVLIKNDNEPRGTRIFGPVAR FT ELRDKKFMKIVSLAPEVI" FT misc_feature 451955..452320 FT /note="BlastProDom hit to PD001093, PD001093" FT /note="HMMPfam hit to PF00238, Ribosomal protein L14p/L23e" FT misc_feature 452132..452212 FT /note="ScanRegExp hit to PS00049, Ribosomal protein L14 FT signature." FT CDS 452326..452640 FT /transl_table=11 FT /gene="rplX" FT /locus_tag="DIP0487" FT /product="50S ribosomal protein L24" FT /note="Similar to Bacillus subtilis 50S ribosomal protein FT L24 RplX SW:RL24_BACSU (P12876) (103 aa) fasta scores: E(): FT 3e-17, 56.31% id in 103 aa" FT /protein_id="CAE48998.1" FT /translation="MKIHKGDMVLVISGPDKGAKGKVIQAFPKTEKVLVEGVNRIKKHV FT ANSAPERGAESGGIVTQEAPIHVSNVMVLDSDGNPTRVGYRFDENGKKVRISRRNGKDI FT " FT misc_feature 452326..452538 FT /note="BlastProDom hit to PD001677, PD001677" FT misc_feature 452332..452511 FT /note="HMMPfam hit to PF00467, KOW motif" FT misc_feature 452341..452394 FT /note="ScanRegExp hit to PS01108, Ribosomal protein L24 FT signature." FT CDS 452643..453206 FT /transl_table=11 FT /gene="rplE" FT /locus_tag="DIP0488" FT /product="50S ribosomal protein L5" FT /note="Similar to Bacillus halodurans 50S ribosomal protein FT L5 RplE or BH0146 SW:RL5_BACHD (Q9Z9K2) (179 aa) fasta FT scores: E(): 3.5e-42, 59.88% id in 177 aa, and to FT Streptomyces coelicolor 50S ribosomal protein L5 RplE FT TR:Q9L0C8 (EMBL:AL161803) (185 aa) fasta scores: E(): FT 5e-57, 79.45% id in 185 aa" FT /protein_id="CAE48999.1" FT /translation="MSENYTPRLKTRYREEIRTKLNDEFSYENVMQIPGVVKVVVNMGV FT GDAARDSKLINGALEDLTLITGQKPELRRAKKSIANFKLREGMPIGARVTLRGDRMWEF FT LDRLLTVALPRIRDFRGLSDQQFDGHGNYTFGLSEQTMFYEIDVDKIDRPRGMDITVVT FT TATNNEEGRALLRELGFPFKKADA" FT misc_feature 452727..452897 FT /note="HMMPfam hit to PF00281, Ribosomal protein L5" FT misc_feature 452733..453194 FT /note="BlastProDom hit to PD001076, PD001076" FT misc_feature 452907..453191 FT /note="HMMPfam hit to PF00673, ribosomal L5P family FT C-terminus" FT CDS 453909..455252 FT /transl_table=11 FT /gene="sdaC" FT /gene_synonym="dcrA" FT /locus_tag="DIP0489" FT /product="serine transporter" FT /note="Similar to Escherichia coli serine transporter SdaC FT or DcrA or B2796 or Z4113 or ECS3656 SW:SDAC_ECOLI (P36559) FT (429 aa) fasta scores: E(): 4.6e-100, 61.66% id in 420 aa" FT /protein_id="CAE49000.1" FT /translation="MSQIVSHSASAGVRDGVAPSESPASSSAPSWRKTDTVWSLSLFGT FT AIGAGVLFLPINAGIGGIIPMLVMAVVAYPMAHWAHRGLTRFILSASKEDADLTDVVDE FT HFGHKAGAFITVLYFLSVYPILLVYSVTITNTVNSFLENQLGITPLPRWLMSLILVGGL FT IFVVSLGRTVIVKAMSVLVFPFIAILVVLSVYLIPKWNTALFQTFDLRTSAEASGHSIW FT VTLLLLVPVMVFSFNHSPIISSFAQEKRAEYGQWADYKTGRILSAAQILMVVVVMFFVF FT SCALSLSPADLAAAKEQNITILSYLANHFDNPVIQWAAPIIAMIAVAKSFLGHYLGAAE FT GFQGLIASGAASKGKTVDTQSRALVLGTLAFMLISSWLVAWLNPSILGMIETMCGPTIA FT ILLFLMPMYAIHKVPALAKYRGRISNYLVFGMGLLALCTIVYSIVQAF" FT misc_feature 454008..455147 FT /note="ProfileScan hit to PS50286, Permeases for amino FT acids and related compounds, family II." FT misc_feature order(454017..454070,454080..454148,454239..454307, FT 454365..454433,454446..454499,454569..454637, FT 454698..454766,454848..454916,454995..455054, FT 455070..455138,455175..455243) FT /note="11 probable transmembrane helices predicted for FT DIP0489 by TMHMM2.0" FT misc_feature 454026..454097 FT /note="FPrintScan hit to PR00166, Aromatic amino acid FT permease signature" FT misc_feature 454377..454451 FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT misc_feature 454578..454646 FT /note="FPrintScan hit to PR00166, Aromatic amino acid FT permease signature" FT misc_feature 454884..454943 FT /note="FPrintScan hit to PR00166, Aromatic amino acid FT permease signature" FT misc_feature 454953..454976 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 455277..456653 FT /transl_table=11 FT /gene="sdaA" FT /locus_tag="DIP0490" FT /product="L-serine dehydratase 1" FT /EC_number="4.3.1.17" FT /note="Similar to Escherichia coli L-serine dehydratase 1 FT SdaA or B1814 SW:SDHL_ECOLI (P16095) (454 aa) fasta scores: FT E(): 4.8e-113, 63.08% id in 447 aa" FT /protein_id="CAE49003.1" FT /translation="MFISCFDMFKIGIGPSSSHTLGPMKAGKAFVDTLEERDLLDRVTR FT VRADVYGSLSLTGIGHATDKAIIMGLAGFEPETVDIDAMPGFLEIVASLQRLALAGGKK FT TVDFSRTEGIVFHNTCLQLHENGMTITAFEGDEVLLTKAYFSIGGGFIVDKEHFGLPVE FT DTAVVPFPYNTAEEVLAHCDREGMSIPEFAWRNEVAANGEEAVREHLAKVWKVMQSGIE FT RGSSAEGILPGDLRVPRRAKALRERLEATSENEPLRMMSWLNMFAMAVNEENASGGRVV FT TSPTNGACGVLPAVLSYWDRLVKPVGEQEVIDYLLTCGVVGALYKKNASISGAEVGCQG FT EVGVACSMAAAGIAQLMGATPAQAFAAAEIAMEHNLGLTCDPVCGQVQVPCIERNAIAA FT VTSVNAANMSLQRGSTPTVSLDQVIQTMYQTGKDMDSKYRETSLGGLAKVLMPRLMPCS FT " FT CDS 456732..457760 FT /transl_table=11 FT /locus_tag="DIP0491" FT /product="Putative secreted amino acid hydrolase" FT /note="Similar to Mycobacterium leprae probable FT L-asparaginase AnsA or ML1198 or MLCB458.13c SW:ASPG_MYCLE FT (Q9X7E6) (310 aa) fasta scores: E(): 6.4e-18, 36.39% id in FT 305 aa, and to Erwinia chrysanthemi L-asparaginase FT precursor AnsB or Asn SW:ASPG_ERWCH (P06608) (348 aa) fasta FT scores: E(): 2.5e-11, 30.9% id in 330 aa. Also similar to FT DIP1587, 306 aa; fasta scores: E(): 1.1e-48, 52.303% FT identity in 304 aa overlap. Note: Contains a putative FT twin-arginine translocation (TAT) system recognition motif FT (RRSFLG) at the N-terminal region" FT /protein_id="CAE49004.1" FT /translation="MISRRSFLGACALASVAGAVQTCSNKAGSAGVRNDASGHLIVLGT FT GGTIACTNVDGALVPTVSGEELVAGVYDTFDKDKLSIDVRQVSQLDSSAMTLKDTDMII FT TEVLKAVKEDGVTGVIVTHGTDSMEESAIAVDTFLDSDVPVVFTGSMLPFDDPKTDGPA FT NLLLAVRTATAPENRGKGAFIAFGEKTLRARGAYKSNANSVDGFDSNADNELTRPAALA FT YKPLEHQRVDIIAAYPGAPRALVDASLASGAKALVIEGMGAGNVGGDIALAISDALDKK FT IPVVMSTRVDAGRVEGTYGGAGGGATLAAKGVIGADILRAGQSRILLACALATKTDPKT FT LF" FT misc_feature 456732..456818 FT /note="Signal peptide predicted for DIP0491 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.550 between residues 29 and 30" FT misc_feature 456741..456758 FT /note="Potential twin-arginine recognition motif RRSFLG" FT misc_feature 456849..456884 FT /note="FPrintScan hit to PR00139, Asparaginase/glutaminase FT family signature" FT misc_feature 456855..456881 FT /note="ScanRegExp hit to PS00144, Asparaginase / FT glutaminase active site signature 1." FT misc_feature 456861..457748 FT /note="HMMPfam hit to PF00710, Asparaginase" FT misc_feature 457080..457136 FT /note="FPrintScan hit to PR00139, Asparaginase/glutaminase FT family signature" FT misc_feature 457560..457616 FT /note="FPrintScan hit to PR00139, Asparaginase/glutaminase FT family signature" FT CDS complement(457757..458800) FT /transl_table=11 FT /locus_tag="DIP0492" FT /product="Putative molybdopterin biosynthesis protein" FT /note="Similar to Synechococcus sp MTP-synthase sulfurylase FT MoeB TR:O54307 (EMBL:Y16560) (391 aa) fasta scores: E(): FT 1.1e-37, 39.56% id in 369 aa" FT /protein_id="CAE49005.1" FT /translation="MTIDHARYARQIALSGFGVAGQTALSGAHVVCIGAGGLGSPAALY FT LAAAGVGTITIIDDDVVDRSNLQRQIMHSDEAVGQPKVESALQRLRALNPDCRVVAINK FT RCVWPACLDMCRDADVIIDGSDNFDTRYVASTTAARLGIPHVWGAILGFQAQLSVFDAE FT HGPVYEDVFPQPPLPGDVPNCAEAGVLGPLVGVVGSAMALEAIKLITGIGQPLTGNIGY FT FDGMTGLWEYIPISSHADTRRQLRVEPPRHTATVRETTKVDSKKYTTIIDVREPEETHH FT GTIPNARLVPLSLIENDLNTARSLIPDGSLLYCAAGIRSARACILLSRAGVKDLVSLSG FT GYNQWSA" FT misc_feature complement(457760..458002) FT /note="ProfileScan hit to PS50206, Rhodanese/cdc25 fold." FT misc_feature complement(457760..458041) FT /note="HMMSmart hit to SM00450, Rhodanese Homology Domain" FT misc_feature complement(458150..458227) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT misc_feature complement(458315..458725) FT /note="HMMPfam hit to PF00899, ThiF family" FT misc_feature complement(458315..458743) FT /note="ProfileScan hit to PS50204, UBA/THIF-type NAD FT binding fold." FT misc_feature complement(458624..458713) FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature complement(458648..458716) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT CDS complement(458800..459795) FT /transl_table=11 FT /locus_tag="DIP0493" FT /product="Putative bifunctional molybdopterim biosynthesis FT protein" FT /note="N-terminal region similar to the C-terminal region FT of Synechococcus sp molybdenum cofactor biosynthesis FT protein CB MoaCB SW:MOCB_SYNP7 (Q56208) (319 aa) fasta FT scores: E(): 5.2e-09, 35.06% id in 154 aa and C-terminal FT region similar to Mycobacterium tuberculosis molybdopterin FT converting factor subunit 2 MoAE or Rv3119 or MT3201 or FT MTCY164.29 SWALL:MOAE_MYCTU (SWALL:O05795) (147 aa) fasta FT scores: E(): 5.7e-11, 38.97% id in 136 aa" FT /protein_id="CAE49006.1" FT /translation="MSSHSPVQPRRARVVVASTRAAAGQYADTSGPILVEWLRARGFDT FT PEPLVVADADMHTAIATMFAEAESLPDVVLTTGGTGITADDHTVDVVAPLIDTPLPGIS FT QAFWHRGLLNSVDTAILSRCVAGIHRGSTFIMTLPGSQSGCNDGIAVLDTIIDHVCDLL FT ARTPSSPPQAHQCCSHSAPDPDYVKAQVGKVIDAFITEDPLEPLAAQAYDDVRTDAMGA FT VVVFDGLVRDHDGGKRVSNLTYSAHPTSHAVLKKVVARVSVKHPDARIWAAHRVGRLAV FT GEAAFIVIAAAAHRRSAFDAASAVADEVKASVPIWKEQKMADGSIQWVGL" FT misc_feature complement(458857..459210) FT /note="HMMPfam hit to PF02391, Molydopterin converting FT factor subunit 2" FT misc_feature complement(459340..459717) FT /note="BlastProDom hit to PD002460, PD002460" FT misc_feature complement(459538..459579) FT /note="ScanRegExp hit to PS01078, Molybdenum cofactor FT biosynthesis proteins signature 1." FT CDS complement(460091..460834) FT /transl_table=11 FT /locus_tag="DIP0494" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 24.2 kDa protein MT2696 TR:AAK47012 FT (EMBL:AE007102) (224 aa) fasta scores: E(): 1.3e-10, 31.37% FT id in 204 aa" FT /protein_id="CAE49007.1" FT /translation="MGTHTEAMPSTTFAQTAVLSQRQRATLNALSAFPQGAQVSEIAAS FT LGLHVNTVRGHLEELVTKNLVRTAPLPSTGRGRPVLMYHATSATPETVAQEYLSLISLL FT IQHIDLRQPDEIDEVAKVLGKQWAHSIFADHHLEELNGEQTLITLINYLRHLGFDPEVE FT KTQDPTTSMLQLRTCPFGSMAHAPLSFVCRAHEGMLSAVEKTGGISFELTPLSAPHQCS FT IVAQLHGNETIHRQRGEEHPHAGHR" FT CDS complement(460848..462713) FT /transl_table=11 FT /locus_tag="DIP0495" FT /product="Putative molybdenum ABC transport system FT (integral membrane and ATP-binding proteins)" FT /note="N-terminal region similar to Mycobacterium FT tuberculosis molybdenum transport system permease protein FT ModB or Rv1858 or MT1906 or MTCY359.15c SW:MODB_MYCTU FT (P95156) blast scores: E(): 2e-32, score: 353 37% id, and FT C-terminal region to Mycobacterium tuberculosis molybdenum FT transport ATP-binding protein ModC or Rv1859 or MT1907 or FT MTCY359.14 SW:MODC_MYCTU (P95155) blast scores: E(): 1e-17, FT score: 93 28% id" FT /protein_id="CAE49008.1" FT /translation="MPSAVAVLAMVAIGIIIFPLVALWHRINVTHIPDVVRQPTTHDLL FT RVTLGSAAWATILCILLGVPLALFTSSLKRGGAVTRLLVFLPLALPPVVAGLALSAAIG FT RRGVLAPLLDTVGIHFAFAYPGVVAAHVFIALPFVVVIVDSAFRQLNKEVVQSAAGIGM FT TPVGIVVHIILPALAPSIVSGAGLAFARSLGEFGTTLTFAGSLPGVTRTMPIGIYLERE FT IDPEAADALAALLMVIALLVLLVSHSGSLLARVRAPRQRPVAIGAIDSAALRRLTRPVS FT PVSEVMTVVTERGTVSIRPQVATAIIGPNGAGKTTLLGLISGRLLGAHVTIGSRVVSQL FT PPQKRSTVVLTQSPGLPPHATVRQAVTMATRARAVADELLAVAGLDTLADVRCRHLSGG FT QAAQVALLRALAARPSIMLLDEPLAAVDMSQARQWRAFLQDSKNDRTCVFVSHDPFDVS FT ALAHDVVVMEQGQPVACGAVTDMMAEPVNSFVAEFAGLNVIPGVIDSSSEGISVLVVGE FT QRIMGVSTTALEPGSSAHAIFTPDSVTLATYEQDISETSARNQFTACVIKLTPHGAVTT FT VTLDIGSGVVMSVPITTISARTLGIKLHNIVRCSIKTMAITIVKN" FT misc_feature complement(461301..461816) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(461304..461813) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(461316..461528) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(461739..461807) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(461769..461792) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(order(461955..462020,462060..462125, FT 462186..462251,462291..462356,462402..462467, FT 462507..462572,462633..462698)) FT /note="7 probable transmembrane helices predicted for FT DIP0495 by TMHMM2.0" FT misc_feature complement(462048..462278) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature complement(462189..462275) FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS complement(462759..463301) FT /transl_table=11 FT /locus_tag="DIP0496" FT /product="Putative molybdate binding protein (partial)" FT /note="Similar to part of Escherichia coli FT molybdate-binding periplasmic protein precursor ModA or FT B0763 SW:MODA_ECOLI (P37329) (257 aa) fasta scores: E(): FT 0.36, 31.6% id in 193 aa" FT /protein_id="CAE49009.1" FT /translation="MQQLREGAPADVFISADKKNMDKALADGTVGSSVKVATNSMVMVV FT PQGNPGKVTSVSDLAGKTVVLCDVQVPCGTISKKLQDANGVEIKAASLESSVSDVLGKV FT VSGEADAGWVYRTDAAAAGNKVEVIDIPHAQEFENSLYAAVSTHSTSPDEAQKLLDLIV FT SPKMAQVWKDHGFSPAQ" FT CDS complement(463533..464312) FT /transl_table=11 FT /gene="narI" FT /locus_tag="DIP0497" FT /product="Putative nitrate reductase gamma chain" FT /note="Similar to Streptomyces coelicolor putative nitrate FT reductase gamma chain NarI TR:O86714 (EMBL:AL031515) (240 FT aa) fasta scores: E(): 1e-44, 49.78% id in 237 aa, and to FT Bacillus subtilis nitrate reductase gamma chain NarI FT SW:NARI_BACSU (P42177) (223 aa) fasta scores: E(): 6.2e-33, FT 42.27% id in 220 aa" FT /protein_id="CAE49010.1" FT /translation="MHSYDMFLWVAFPWLAIAAFAVGVSWRWRTDQFGWTTHSSQIYES FT TLLRLSSPLFHYGMMFVILGHVMGLAFPKSWTRAVGINDHAYHLIATIPGTIAGIAAVI FT GLCGLIYRRVSNKAVLLSTSKSDKVMYILLALAIFSGFIATVSTQVFGGPHGYDYRETI FT SPWLRQLFIFNPTPELMLDVPWQFKVHVISGFTMLAVWPFTRLVHAFSAPVGYVNRPYV FT VYRSRDITTQPSQQHVAWAPVQHDKNQSKDEAGWTGA" FT misc_feature complement(463629..464306) FT /note="HMMPfam hit to PF02665, Nitrate reductase gamma FT subunit" FT misc_feature complement(order(463662..463727,463854..463919, FT 463980..464045,464106..464171,464235..464300)) FT /note="5 probable transmembrane helices predicted for FT DIP0497 by TMHMM2.0" FT CDS complement(464326..464955) FT /transl_table=11 FT /locus_tag="DIP0498" FT /product="Putative nitrate reductase delta chain" FT /note="Similar to Streptomyces coelicolor nitrate reductase FT delta chain NarJ3 TR:Q9EWF5 (EMBL:AL451182) (220 aa) fasta FT scores: E(): 3e-20, 39.39% id in 198 aa, and to Bacillus FT subtilis nitrate reductase delta chain NarJ SW:NARJ_BACSU FT (P42178) (184 aa) fasta scores: E(): 1.9e-12, 29.14% id in FT 175 aa" FT /protein_id="CAE49011.1" FT /translation="MTDQQRRVVFMATSLLLDYPDDRWEDIIDAVSVQIDDLPKNTRQQ FT FVQFLTAVRVMGRRGMEQHYVECFDQRRRCSLFLSYYAVGDTRQRGAAILAFQESLETL FT GFFLEREELPDHLCVVLEVAAKAEGLAHHVATDMLAAHRDGIEVLRVALEHSDSPYSRL FT VAAVCSALPDIDEETRKNFVDLIRSGPPAELIGIESPLPFPTATNV" FT misc_feature complement(464440..464931) FT /note="HMMPfam hit to PF02613, Nitrate reductase delta FT subunit" FT CDS complement(465007..466608) FT /transl_table=11 FT /gene="narH" FT /locus_tag="DIP0499" FT /product="nitrate reductase beta chain" FT /EC_number="1.7.99.4" FT /note="Similar to Bacillus subtilis nitrate reductase beta FT chain NarH SW:NARH_BACSU (P42176) (487 aa) fasta scores: FT E(): 1.4e-114, 56.31% id in 499 aa" FT /protein_id="CAE49012.1" FT /translation="MKVMAQIAMIMNLDKCIGCHTCSVTCKQAWTNREGTEYIWFNNVE FT TRPGVGYPYGWENQDKWEGGWVLDKKGKLKPRSGGRLKKLSTLFHNPKLPTIQDYYEPW FT TYEYEKLLSTPAGQKTQPTARPISQVDGRPIDKISWSSNWDDNLGGSQETLDDDPVLKQ FT MNLEVKKEIEDAFMFYLPRICEHCLNPTCVSSCPSGAMYKRAEDGIVLVDQDRCRGWRM FT CVSGCPYKKVYFNHKTGKAEKCTLCYPRIEVGQPTVCSETCVGRMRYLGVVLYDADKVA FT SAARTSDVKDLYQAQKNLLLDPHDPQVIEAAMKENIPHAWIEAAQKSPIWDLIARYEVA FT LPLHPEYRTLPMVWYIPPLSPVVDRVTATGNDGEDHKILLTAISTMRIPLDYLAGIFTA FT GDTVPVEKVLRKLAAMRSYMRDISLGKTADESIPAAVGMTGADIRNMYHLLGVSKYDDR FT YVIPTASPETPRGIASLPEYAGINPAQSVEQFHGLGPGAPEACHHEAQSSGGGKVSLAS FT WNVGSSPSSMFPPRKS" FT misc_feature complement(466546..466563) FT /note="ScanRegExp hit to PS00190, Cytochrome c family FT heme-binding site signature." FT CDS complement(466608..470330) FT /transl_table=11 FT /gene="narG" FT /gene_synonym="narC" FT /gene_synonym="bisD" FT /locus_tag="DIP0500" FT /product="respiratory nitrate reductase 1 alpha chain" FT /EC_number="1.7.99.4" FT /note="Similar to Escherichia coli respiratory nitrate FT reductase 1 alpha chain NarG or NarC or BisD or B1224 FT SW:NARG_ECOLI (P09152) (1246 aa) fasta scores: E(): 0, FT 46.16% id in 1237 aa" FT /protein_id="CAE49013.1" FT /translation="MSDPNSVNPLFKLGSFVRKGETGKEGQQIFLKGGRQADVFYRNRW FT AFDKMVRSTHGVNCTGSCSWKVYVKDGVITWESQAVDYPTTGPDMPDYEPRGCPRGASF FT SWYTYSPTRVRYPYARGVLVDMYRDAKKRLGDPVLAWREIQETPEKRDAYISQRGKGGL FT IRIPYEEAIEMASAAHVYTIRKHGPDRIAGFTVIPAMSQVSYGAGTRFLQNIGGVALSF FT YDWYADLPPASPQTFGDQTDVPESGDWFNSAYLMMWGSNIPVTRTPDAHFMAEVRYKGT FT KIVTVSPDFADNTKFADEWLRIEPGTDAALAFAMGHVILKEFHVGKREPYFLDYMRKFT FT DSGFLVTLEQREDGTYTPGKFLTASNTSNAELKNSENATHRYLMMEKDGRVIDPGGTVA FT DHWGEAGMGKWNLSLDGVDPVMSMADTDQFGTAEVLFPRFDLDASAEDINGSGPIGAGI FT VHRGVPVREVDGQLVTTVFDIMLAHYGVNREELHLPGSWPSSYEDASEVGTPAWQEGIT FT GVPTAAAIRVGREFAQSAADSKGRSQILMGAGVNHYFHADNIYRTFLALTSMCGTQGVN FT GGGWAHYVGQEKLRPMNGWQQYAMATDWVRPPRQMITTGFFYFGTEQWRYDNSHASRLG FT SPLASRDVIGDKMLSDTMVEAMKRGWMPSYPQFNRNPLVLADEAKEAGMEVADYVADQL FT QTGQMKFAYEDPSAPENWPRILLNWRTNLMGSSAKGTEFFLRHLLGIDSDATAPELQEG FT ERPQTITWRDAPHGKLDLMLTTDFRNTSTTLVSDIILPAATWYEKNDMSSTDMHPYLHS FT FNAAINPPWEARTDFEVFRDLSKRFSEMAETWLGVQHDVVTSPSHHDSPDEMTIVNGVV FT PDIDEVGFVPGVTMPKMAVVERDYSKIYEKWMHLGPLPASAGTAVHGTKFDVSKQVEEI FT AAMNGVEDTSFGPRPRLDTATKVINAILHMSGVSNGEVAAEGFKFLSKRTGKDLTVLGE FT SNRDARITWDDIKERPAEVLTSPEWTADKRNGRRYTAFSINIEHDKPFHTLTGRMHYYI FT DHDWFMDYGESLPVFRPPLDRLHLNGETRPGELLSGENGDPEVTVRYLTTHNKWSIHSQ FT YFDNLHVLSVSRGGQVIWMSDKDAEKIGVKDNEWIEAYNRNGVVSARAIVSHRIPEGTV FT LMNHAQERTAGTPLNEKTGRRGGTHNSLTRITIKPVHIAGGYGQLTYHFNYIGPTGNNR FT DEVTRIRRRSQEVQY" FT misc_feature complement(466689..467054) FT /note="HMMPfam hit to PF01568, Molydopterin dinucleotide FT binding domain" FT misc_feature complement(467589..468917) FT /note="HMMPfam hit to PF00384, Molybdopterin FT oxidoreductase" FT misc_feature complement(467868..467888) FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT misc_feature complement(467940..467993) FT /note="ScanRegExp hit to PS00490, Prokaryotic molybdopterin FT oxidoreductases signature 2." FT misc_feature complement(469365..469496) FT /note="HMMPfam hit to PF00384, Molybdopterin FT oxidoreductase" FT misc_feature complement(470118..470174) FT /note="ScanRegExp hit to PS00551, Prokaryotic molybdopterin FT oxidoreductases signature 1." FT CDS complement(470374..471705) FT /transl_table=11 FT /locus_tag="DIP0501" FT /product="Putative nitrate/nitrite transport system FT integral membrane protein" FT /note="Similar to Thermus thermophilus Nark2 TR:Q9RA45 FT (EMBL:AJ237974) (443 aa) fasta scores: E(): 2e-79, 50.22% FT id in 448 aa, and to Escherichia coli nitrite extrusion FT protein 2 NarU or B1469 SW:NARU_ECOLI (P37758) (462 aa) FT fasta scores: E(): 1.2e-31, 33.47% id in 472 aa" FT /protein_id="CAE49014.1" FT /translation="MATINTSGRVLTGWNPEDPEAWDSKIAWRTLVITTYSLFIGFSTW FT YLVSAIAPQLNQIGFNFSKTQLYWLSSASGLAAGFSRLAFMFLPPIVGTRKLVTISSFV FT LVLPMLGWFFAIINPATPYWWMLVLSVAGGLGGGVFSGYMPSTGYFFPKAKAGTALGLQ FT AGIGNFGVSFIQLAAPLLMGVSLLGVSAKPQLRTDGSEVFVHTPAIFMVPWTILAGVLA FT WMYLKDVPVKANFRQQMDIFGNFNTWIMTLIYLATFGAFSGFAAQFALLVNNIYGANSS FT LADTFAASELPKGAAFAFLGPLISAAVRAAWGPFCDRFGGAIWTFISCAGMAVSTAVAA FT LLLNPTDPSQFWYFLAAMLTMFFFTGLGNAGTFKQMPMIFPRRQAGGVIGWTAAIAAFG FT PFFVGVIVSTLGAPAFFWGCVVFFALCAALTWIFYARPQAPFPG" FT misc_feature complement(order(470401..470466,470482..470547, FT 470587..470652,470683..470748,470770..470820, FT 470905..470970,471034..471099,471145..471210, FT 471274..471339,471355..471411,471448..471504, FT 471550..471615)) FT /note="12 probable transmembrane helices predicted for FT DIP0501 by TMHMM2.0" FT misc_feature complement(470806..470829) FT /note="ScanRegExp hit to PS00030, Eukaryotic RNA FT Recognition Motif (RRM) RNP-1 region signature." FT CDS complement(472039..473337) FT /transl_table=11 FT /gene="narK" FT /locus_tag="DIP0502" FT /product="Putative nitrate/nitrite transport system FT integral membrane protein" FT /note="Similar to Thermus thermophilus NarK1 TR:Q9RA46 FT (EMBL:AJ237974) (435 aa) fasta scores: E(): 2e-64, 59.56% FT id in 418 aa, and to Escherichia coli nitrite extrusion FT protein 1 NarK or B1223 SW:NARK_ECOLI (P10903) (463 aa) FT fasta scores: E(): 5.2e-17, 27.63% id in 427 aa" FT /protein_id="CAE49015.1" FT /translation="MSHPPIHGENASSPELEPTPQGANSVLIFSTVSFTMMFAVWLMFG FT ILGTPIQKEFGLSDTQLSWILAVAILNGSMWRLPAGILADKIGGRKVMLGITLFSAVAS FT LGVAFSQNYTMTLVLAFLVGFCGNSFTAGAAWASAWFPKHKQGFALGVFGAGNVGASVT FT KFIGPVIIASTAGATYFGFIPAGWRLIPIIYSVTLVIVAILMMIYTPKVDRFGSSGRSL FT AEMLLPLKQVRVWRFSLYYVVVFGAYVALSATLPKYYISNYDVSLAAAGLLTAIFIFPA FT SLLRPVGGWFSDRYGARRAMYGTFFVMGTAAGLLCLPSNIINIFVFTLLIFSLGCAMGV FT GKAAVYKHIPEYFPHDVGAVGGLVGMLGGLGGFFLPPLFAYTKAWTGWSTSPFIVLLIL FT VAVSALWMHVTVHRMLHSHVPELKHHMEVPATQ" FT misc_feature complement(472072..473256) FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature complement(order(472120..472185,472201..472266, FT 472303..472359,472372..472437,472477..472542, FT 472573..472626,472717..472782,472828..472893, FT 472915..472980,473011..473076,473098..473148, FT 473194..473259)) FT /note="12 probable transmembrane helices predicted for FT DIP0502 by TMHMM2.0" FT misc_feature complement(472288..472353) FT /note="Predicted helix-turn-helix motif with score 1078 FT (+2.86 SD) at aa 345-366, sequence LLIFSLGCAMGVGKAAVYKHIP" FT CDS 473591..474085 FT /transl_table=11 FT /locus_tag="DIP0503" FT /product="Putative molybdenum cofactor biosynthesis FT protein" FT /note="Similar to Streptomyces coelicolor molybdenum FT cofactor biosynthesis protein MoaB TR:Q9RKA9 FT (EMBL:AL132674) (179 aa) fasta scores: E(): 7.6e-12, 35.13% FT id in 148 aa" FT /protein_id="CAE49016.1" FT /translation="MHIKSAIIVVSDRISTGTRENKALPLLQRLMSDELQDYSYELISE FT VVVPEGYDTVVEAIATALKQGARFIITAGGTGIRAKNQTPEATASFIHTRCEGLEQQIL FT IHGSTHTHLAGLSRGIVGVTGRDDHAALIVNAPSSSGGITDTWAVISPVIPNIFEGLDA FT S" FT misc_feature 473729..474052 FT /note="BlastProDom hit to PD002460, PD002460" FT CDS complement(474082..474696) FT /transl_table=11 FT /locus_tag="DIP0504" FT /product="Putative molybdopterin biosynthesis protein" FT /note="Similar to Rhodobacter capsulatus FT molybdopterin-guanine dinucleotide biosynthesis protein A FT MobA SW:MOBA_RHOCA (Q9X7K0) (190 aa) fasta scores: E(): FT 6.3e-05, 29.53% id in 193 aa, and to Pseudomonas putida FT molybdopterin-guanine dinucleotide biosynthesis protein A FT MobA SW:MOBA_PSEPU (Q9WWW0) (191 aa) fasta scores: E(): FT 0.00032, 28.71% id in 195 aa" FT /protein_id="CAE49017.1" FT /translation="MIGPENCNSVSEPIAYVIILAGGRSSRMGYDKAQVMVDGRRLIDL FT CLESIASVHAHPIVVSGQDLQLTAAVTQVMEEPAFGGPVAGIAAGMRCCDTKAGLIGVI FT AVDAPRSGNYLNQLRRVVLTHPEVGVAHAVVEGYDQPLLAVWRYEALTQALHALGSPRN FT VAAKRLLRSATTPVIAVPVDSSARDYDTVAELSALGRVRLR" FT CDS complement(474674..475141) FT /transl_table=11 FT /gene="moaC" FT /locus_tag="DIP0505" FT /product="molybdenum cofactor biosynthesis protein" FT /note="Similar to Streptomyces coelicolor molybdenum FT cofactor biosynthesis protein MoaC TR:Q9RKA8 FT (EMBL:AL132674) (170 aa) fasta scores: E(): 2.5e-29, 55.92% FT id in 152 aa, and to Escherichia coli, and molybdenum FT cofactor biosynthesis protein C MoaC or ChlA3 or B0783 or FT Z1002 or ECS0861 SW:MOAC_ECOLI (P30747) (160 aa) fasta FT scores: E(): 1.9e-19, 47.74% id in 155 aa" FT /protein_id="CAE49018.1" FT /translation="MFTHLNNNGSAYMVDVTHKQVSVRSATAVGEVICSPTVLEALTNG FT TVPKGDVVACARIAGISAAKKVPDLLPLAHTIGVHGCEVIIEIADDRVRLKATVRTADR FT TGVEMEALTAVSVAALTIIDMVKGVDRSAYISRCGIVAKSGGRSGDWSREL" FT misc_feature complement(474704..475105) FT /note="HMMPfam hit to PF01967, MoaC family" FT CDS complement(475157..476383) FT /transl_table=11 FT /locus_tag="DIP0506" FT /product="Putative molybdopterin biosynthesis protein" FT /note="Similar to Escherichia coli molybdopterin FT biosynthesis protein MoeA or ChlE or BisB or NarE or B0827 FT SW:MOEA_ECOLI (P12281) (411 aa) fasta scores: E(): 3.9e-25, FT 32.82% id in 326 aa" FT /protein_id="CAE49019.1" FT /translation="MLTPKIYRETCIDLAHSLAQARTGTITVSPHDAAIDCLTLAHDIH FT AVLPIPPMDNSAMDGFLVRTADLVGSAPWSFPVAGDVPAGAAPMEVPPGRAVRIMTGAE FT VIGENVTVIPVEKTNIPAGPTTCPSHIVVHEADAQPRHIRRRGENVQPGQCIATRGQRV FT DAGTLAAIVSCGVREIEVLPRLRVTVIATGNELGDSDADSLKRAHIPDSNSPMIAQLVH FT DTGLATVNIVRMCDDIAAFGSAISAAANSSDLIITTGGISAGAFDVVKESLSSHKDSTM FT WFGAVAMQPGKPQGHGRVGNTMITCLPGNPVSAFVSFQLFVRPALYTLAGLQPPALGYL FT EADIQGTLPTPRGRDIFVPATVTYVDTWQAQPAAFGSHFIGSLVGVNALIHVPADAHRV FT APRVIPLTF" FT misc_feature complement(475166..476383) FT /note="HMMPfam hit to PF00994, Molybdenum cofactor FT biosynthesis protein" FT misc_feature complement(475184..476272) FT /note="BlastProDom hit to PD002460, PD002460" FT CDS complement(476407..477438) FT /transl_table=11 FT /gene="moaA" FT /locus_tag="DIP0507" FT /product="molybdenum cofactor biosynthesis protein A" FT /note="Similar to Mycobacterium tuberculosis molybdenum FT cofactor biosynthesis protein A 2 MoaA2 or Rv0869c or FT MT0892 or MTV043.62c SW:MOA2_MYCTU (O53881) (360 aa) fasta FT scores: E(): 9.7e-68, 52.32% id in 344 aa, and to Bacillus FT subtilis molybdenum cofactor biosynthesis protein A MoaA or FT NarA or NarAB SW:MOAA_BACSU (P39757) (341 aa) fasta scores: FT E(): 2.3e-39, 38.61% id in 347 aa" FT /protein_id="CAE49020.1" FT /translation="MRSAPHPTYDLIDSFGRTATDLRVSLTDKCNLRCTYCMPAEGLQW FT MPSPQVLTDDEVIRLVSIAVTRLNVTSVRFTGGEPLLRKSLESIVSTTSSLRTPQGTSP FT SIALTTNGLGLDKRITGLVDAGLDRINISLDSLDPQRYAELSRRARLDDVLKGIDAAVR FT TGIAPIKINTVVMPGVNEDDIVPLARYCLSTGLQLRFIEQMPIGAEGNWDKSSMITAAQ FT ILEVLSSEIELSEASQPRGHAPAELWNASYQGIQGSIGVIAAVTQPFCGACDRTRLTAD FT GSIRNCLFAHDEFSLRDLMRDGASDDELAQAWKGHAYIKAAGHGINDLGFLKPTRTMSA FT IGG" FT misc_feature complement(476587..477252) FT /note="HMMPfam hit to PF01444, moaA / nifB / pqqE family" FT misc_feature complement(477046..477081) FT /note="ScanRegExp hit to PS00136, Serine proteases, FT subtilase family, aspartic acid active site." FT misc_feature complement(477328..477363) FT /note="ScanRegExp hit to PS01305, moaA / nifB / pqqE family FT signature." FT CDS complement(join(478087..478371,478373..478621, FT 478624..478854)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0508" FT /product="Conserved hypothetical protein (pseudogene; FT partial)" FT /note="Pseudogene. Similar to N-terminal region of FT Pasteurella multocida hypothetical protein PM1540 TR:Q9CKR6 FT (EMBL:AE006190) (309 aa) fasta scores: E(): 5.9e-13, 29.66% FT id in 236 aa. Contains two frameshifts at residues 77 and FT 160" FT /db_xref="PSEUDO:CAE49021.1" FT misc_feature complement(478261..478326) FT /note="1 probable transmembrane helix predicted for DIP0508 FT by TMHMM2.0" FT CDS complement(479270..480190) FT /transl_table=11 FT /locus_tag="DIP0511" FT /product="Putative lysine biosynthesis protein" FT /note="Similar to Agrobacterium tumefaciens Agr_C_1883p FT TR:AAK86832 (EMBL:AE008033) (294 aa) fasta scores: E(): FT 3.5e-20, 31.69% id in 306 aa, and to Bacillus subtilis FT dihydrodipicolinate synthase DapA SW:DAPA_BACSU (Q04796) FT (290 aa) fasta scores: E(): 1.1e-15, 29.68% id in 283 aa" FT /protein_id="CAE49022.1" FT /translation="MPSIVKGIIPPVLTPMKSDRSIDFEALERLVEHLIAGGVDGLFAL FT GSSGEVAFLSDEDRATVIREIVRIAAGRVPVYAGVIDMQVNRMLGHIKAAEEAGVDAIV FT ATAPFYAICGPAEVEAHFRAVAAATSLPVIAYDIPVCVHTKLSPELLVKLGSEGVLAGV FT KDSSGDDVSFRRLVMLNKKAGSPLTLLTGHEAVVDGAFIAGADGCVPGLGNVDPAGYVR FT MWKAAEAGDWATVQKEQDRLAALFEIVFQPIGKVGPAAGVGSFKTALELMGIFSSNLMS FT MPLAPIDDAPSRDAIAEILKATDML" FT misc_feature complement(479279..480181) FT /note="HMMPfam hit to PF00701, Dihydrodipicolinate FT synthetase family" FT misc_feature complement(479339..480172) FT /note="BlastProDom hit to PD001859, PD001859" FT misc_feature complement(479747..479800) FT /note="FPrintScan hit to PR00146, Dihydrodipicolinate FT synthase signature" FT misc_feature complement(479825..479875) FT /note="FPrintScan hit to PR00146, Dihydrodipicolinate FT synthase signature" FT misc_feature complement(480014..480079) FT /note="FPrintScan hit to PR00146, Dihydrodipicolinate FT synthase signature" FT CDS complement(480224..481057) FT /transl_table=11 FT /locus_tag="DIP0512" FT /product="Putative oligopeptide transport system FT ATP-binding protein" FT /note="Similar to Bacillus subtilis oligopeptide transport FT ATP-binding protein OppF or Spo0KE SW:OPPF_BACSU (P24137) FT (308 aa) fasta scores: E(): 1.7e-36, 48.51% id in 235 aa" FT /protein_id="CAE49023.1" FT /translation="MSNHVKQSRERLTGRSSDAPLIELKDVNVIHKTRTGKLFRPDTVH FT ANKNVNFHVDRGEVVGIVGESGCGKSTLARVMVGLQKPTSGEVFFNGTKMTGSGHQRKE FT LGRAISVVFQDPATALNPRMTVKEQLLDPLRVHKIGTEAERLTRVQVLLSLVGLPQSAL FT DVLPRQISGGQRQRVAIARALALEPDLIIADEPTSALDVSVRAQVLNLLSDLRTELGLG FT LVFISHDINTVRYISDRMCVMYKGEILEEQPTEQLFAAPKTDYTRTLLAATPSFL" FT misc_feature complement(480317..480892) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(480320..480889) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(480332..480550) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(480506..480550) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(480806..480883) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(480845..480868) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(481063..483051) FT /transl_table=11 FT /locus_tag="DIP0513" FT /product="Putative oligopeptide transport system (integral FT membrane and ATP-binding proteins)" FT /note="C-terminal region similar to Salmonella typhimurium FT oligopeptide transport ATP-binding protein OppD or STM1743 FT SW:OPPD_SALTY (P04285) (335 aa) fasta scores: E(): 3.2e-38, FT 42.07% id in 328 aa, and N-terminal region to Bacillus FT firmus dipeptide transport system permease protein DppC FT SW:DPPC_BACFI (P94312) (304 aa) fasta scores: E(): 4.2e-32, FT 41.19% id in 267 aa" FT /protein_id="CAE49024.1" FT /translation="MRRNLTENLETKAGHRFTGLRSLPVASKIALIFLALIAAMAIFAP FT LISSYDPLASSTPVQPPSGEHWFGTDAIGRDIFARVAFGARSSLVIGLCATAAALAAAA FT VLGSIAATGGKVVSEVLMRILDIIMSFPGIALAAVFVAVFGTSLPVLVFAIGFLYVPQL FT SRVVRANILSEFGEDYVAAAKVMGARIPHILLKHVARNTIAPIAVFATVLVADAIVFEA FT SLSFINAGVKPPEPSWGNILADGKQLLLSGAWWPTFFPGLMILLTVLALNILSEGLTDA FT MASPRIKRTAAVSDNDPTIDKRNTLGHTTEEEAAKALNTSLAKLHDAEMSEDRRLNYTR FT GEEPLIVVKDLSIAFPNAHGDVKIVDKVNFTVSPGETMGLVGESGCGKSLIAMTIMGLL FT PPTAVITGEILYGGKNLLEMSADERNALRGHDMAMIYQDALSSLNPSMLISTQLNQLIR FT RGGKRTAEELMELVGLDPVRTLKSYPHELSGGQRQRVLIAMALTRNPRLLIADEPTTAL FT DVTVQHQVVDLLNELREKLGFSMIFVSHDLALVAKLAHKITVMYAGQVVEQGHTRELLA FT DPHHEYTRGLLGAVLSIESGASRLYQVPGTVPSPREFVAGDRFAPRSSHPQLGLNQKPV FT MRAIDGTSTHRWAATDELLAAMQSKGE" FT misc_feature complement(481294..481932) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(481363..481929) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(481375..481593) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(481549..481593) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(481846..481923) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(481861..481908) FT /note="ScanRegExp hit to PS00589, PTS HPR component serine FT phosphorylation site signature." FT misc_feature complement(481885..481908) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(order(482242..482307,482371..482436, FT 482593..482658,482722..482787,482911..482976)) FT /note="5 probable transmembrane helices predicted for FT DIP0513 by TMHMM2.0" FT misc_feature complement(482311..482541) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature complement(482902..483051) FT /note="Signal peptide predicted for DIP0513 by SignalP 2.0 FT HMM (Signal peptide probability 0.986) with cleavage site FT probability 0.515 between residues 50 and 51" FT CDS complement(483051..484016) FT /transl_table=11 FT /locus_tag="DIP0514" FT /product="Putative oligopeptide transport system integral FT membrane protein" FT /note="Similar to Bacillus subtilis oligopeptide transport FT system permease protein AppB SW:APPB_BACSU (P42062) (317 FT aa) fasta scores: E(): 4.6e-31, 34.7% id in 317 aa" FT /protein_id="CAE49025.1" FT /translation="MSNLLRLIGRRLVALPIMILGVTFLVFFIMSFSPADPARLALGET FT ASLEALEEYRESHGLNDPLLVRYFHFLGDMLHGDLGTTTGNTPVTDVVARAFPITLQLT FT MWGLLIAVVFALVFGVIAALYRDRWPDQVIRIVSIAALATPSFWLAILLIQWLGTIPGA FT WGLFPALVTGWTKMTENPQIYFNNIFLPALALGVPVAGSLTRVVRTAMVEELDKDYVRT FT AIGSGIPKSEVISRNVLRNALITPITVLGLRVGYLMGGAVIIEIIFNIQAMGQLILDGV FT TRNDVFLVQGVTLTVAVAFIIINIIVDMLYVLVNPRIRSI" FT misc_feature complement(order(483075..483140,483201..483266, FT 483405..483470,483516..483581,483642..483707, FT 483915..483980)) FT /note="6 probable transmembrane helices predicted for FT DIP0514 by TMHMM2.0" FT misc_feature complement(483171..483386) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature complement(483297..483383) FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT misc_feature complement(483912..484016) FT /note="Signal peptide predicted for DIP0514 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.870 between residues 35 and 36" FT CDS complement(484258..485874) FT /transl_table=11 FT /locus_tag="DIP0515" FT /product="Putative transport system secreted protein" FT /note="Similar to Escherichia coli O157:H7 EDL933 putative FT transport protein Z1054 TR:AAG55204 (EMBL:AE005264) (512 FT aa) fasta scores: E(): 4.3e-19, 24% id in 479 aa. Note: FT Contains a putative twin-arginine translocation (TAT) FT system recognition motif (RRDFFK) at the N-terminal region" FT /protein_id="CAE49026.1" FT /translation="MDSQRRYSRRDFFKISGAVGLAAGFAATLSACAPDNSGSSTSGSQ FT AAAGSANNDGTINAAISYELGTNGYDPMSTTAALTVAANWHTLEGLTEIDPATGETYAA FT LAKEMPKASSTEVEVTLRDGAKFHDGSAVTADDVVFSFERVLDKANKSLYASFIPFITS FT VEKKDDKTVVFKLSTETGVFASRLAVVKIVPKAAVEKDVDAFSANPIGSGPYKMTDNGG FT TSKTVKFERFEDYNGPKPARAKNMVWQIIPDASTRTNALQSKSVQAIDSVPYLSIDQLK FT GTHTVESVQGFGLLFAMFNNDKSNPFSDLKNRQAFLYGIDMDKVIKTALLGQATAPTSF FT LHKEHPQYHEAKVVYSHDAEKAKALFKETGLTKLRMLCTDHDWVKKCTPLIQESLTALG FT IQVDFTEKKSSDVYNTIDGKPEAYDVVIAPGDPSVFGTDPDLLMRWWYSGDTWTDTRMH FT WKGTEAYAKLQEVLDAGLAATSESEQKNKWHEALDIISENVPLYPLLHRKAPTAWDAST FT LVDFKPISLTGLSFSGVGTTQ" FT misc_feature complement(484756..485808) FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5" FT misc_feature complement(485737..485874) FT /note="Signal peptide predicted for DIP0515 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.597 between residues 46 and 47" FT misc_feature complement(485833..485850) FT /note="Potential twin-arginine recognition motif RRDFFK" FT CDS 485970..486158 FT /transl_table=11 FT /locus_tag="DIP0516" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE49027.1" FT /translation="MLTSHLKATDRAFSTPIPLWFGMFKHSGDMEKWEANGLRHSTFES FT DSHRLLGVNITKAPTNQ" FT CDS 486216..486977 FT /transl_table=11 FT /locus_tag="DIP0517" FT /product="Putative GntR family regulatory protein" FT /note="Similar to Escherichia coli galactonate operon FT transcriptional repressor DgoR or B3694/B3695 SW:DGOR_ECOLI FT (P31460) (229 aa) fasta scores: E(): 8.4e-09, 23.11% id in FT 199 aa" FT /protein_id="CAE49028.1" FT /translation="MKDHSGISFGKNPTVLAIENYIRENGLTPGDVLPSEAAICEHLSV FT SRSSVREAMRTLASLDVVEIRHGHGTYVGKMSMAPLVNGMVLRLTLNEKSAIENLQHVV FT GMRIALDRSNAQELAAYYKGRETPKLDQIVEEMKIQFERGESFEHQDFLFHQLLNDHLS FT NPLMQEFSMALWEIHTRVVPRLGLRDPEDISNTVQAHAHMVEALRAGDVDKLLETIDEH FT YQPLLSILEKNRQYVEQTEHAVESQKGTLHL" FT misc_feature 486255..486434 FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR family" FT /note="HMMSmart hit to SM00345, helix_turn_helix gluconate FT operon transcriptional repressor, DNA-binding" FT misc_feature 486312..486356 FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT misc_feature 486312..486386 FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT misc_feature 486354..486404 FT /note="FPrintScan hit to PR00035, GntR bacterial regulatory FT protein HTH signature" FT CDS 486974..487858 FT /transl_table=11 FT /locus_tag="DIP0518" FT /product="Putative regulatory protein sugar kinase" FT /note="Similar to Streptomyces coelicolor glucokinase Glk FT or SC6E10.20c SW:GLK_STRCO (P40184) (317 aa) fasta scores: FT E(): 8e-13, 30.91% id in 317 aa" FT /protein_id="CAE49029.1" FT /translation="MTHALGVDIGGTKIAVGIVDSTDPTTVISRHIVPTPDHDVIDRVR FT DAIAHIITPEVTSIGIGAPGVIDETTGVVVSSGPTMQGWAGTRIADTIAAEFSLPVAVH FT NDVRVMGLGESIYGAGRDYTNVLFVSLGTGVGGAIVRDGRLVASPHHTAGELRALIGRL FT PDGRADLLENFAAGPGLAQRFGERYPEHAGRDLRFIMELYHAGDTHARDYITATLAAAG FT ETIAGFASAIDVDAIIIGGGVGNIGDAIIKPFAHGFAAHAIPPLDTIPIRQAQLGTDAP FT IVGAAHLGHSAIE" FT misc_feature 486989..487513 FT /note="HMMPfam hit to PF00480, ROK family" FT CDS 487887..488582 FT /transl_table=11 FT /locus_tag="DIP0519" FT /product="Putative epimerase" FT /note="Similar to Clostridium perfringens putative FT N-acetylmannosamine-6-P epimerase NanE TR:Q9S4L0 FT (EMBL:AF130859) (221 aa) fasta scores: E(): 1e-24, 39.64% FT id in 222 aa" FT /protein_id="CAE49030.1" FT /translation="MDRNEFIDQVRGSLIVSAQAPTGHPLRDTRTIAFLAKAAEYGGST FT AIRCGGYGGLDDIAAVREAVSLPVIGLTKEGDTGVYITPTVASAVAVAQAGAEVVAIDA FT TLRPRQDGSTFKEQVDAVHAEGKLAMADIATAEEAVQAHRDGADIISTTLAGYTEHREK FT THGPDIELIKEIRELLGDEIFLIGEGRFHSPEHVKQGFAAGIDAVIVGTAITDTAWVTT FT QFANAARGN" FT misc_feature 488427..488534 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 488618..489754 FT /transl_table=11 FT /locus_tag="DIP0520" FT /product="Putative deacetylase" FT /note="Similar to Bacillus subtilis FT N-acetylglucosamine-6-phosphate deacetylase NagA FT SW:NAGA_BACSU (O34450) (396 aa) fasta scores: E(): 1.3e-23, FT 34.7% id in 389 aa, and to Escherichia coli, and FT N-acetylglucosamine-6-phosphate deacetylase NagA or B0677 FT or Z0824 or ECS0707 SW:NAGA_ECOLI (P15300) (382 aa) fasta FT scores: E(): 2.9e-18, 26.15% id in 390 aa" FT /protein_id="CAE49031.1" FT /translation="MKQIIGDLVTPAGVLPHHRIDIDSNGMIAAITPAPEVDNPPLVLP FT GLADIHNHGGAGESFPNSDYDGCVIAARHHRAHGSTTLLASTVSMPEHTLLPQLSLLAD FT LADAGEIDGIHAEGPFVNPCRCGAQDPEAIILGDPELFKKMIRAARGWLKSMTFAPETA FT HAKEIIDLCAENNIIVSLGHTDADFSVTEQALSYAVAAGATVTATHLFNAMPAIHHRDP FT GAAAALIDAAARGNAHVELVADGIHLDDHTVRMVIDSVGADRVSFVSDAMGAAGKEDGD FT YVLGALAVTVKDSVARLTTTDGSEGAIAGGTSRVIDQVRRHVAAGFPIEDVVKAATEGT FT RILGLHDRGAIEVGKRADLVLCSGDFHVDHVLIKGEDI" FT misc_feature 489239..489751 FT /note="HMMPfam hit to PF02612, FT N-acetylglucosamine-6-phosphate deacetylase" FT CDS 489788..490567 FT /transl_table=11 FT /locus_tag="DIP0521" FT /product="Putative isomerase" FT /note="Similar to Streptomyces coelicolor putative FT glucosamine phosphate isomerase SC7E4.33c TR:Q9K487 FT (EMBL:AL359214) (261 aa) fasta scores: E(): 5e-50, 54.44% FT id in 259 aa, and to Escherichia coli FT glucosamine-6-phosphate isomerase NagB or GlmD or B0678 or FT Z0825 or ECS0708 SW:NAGB_ECOLI (P09375) (266 aa) fasta FT scores: E(): 4.4e-32, 44.39% id in 223 aa" FT /protein_id="CAE49032.1" FT /translation="MEIVITPTKDDAARIAADILEEYAREGKTLGLATGSTPLGTYQEL FT IRRHNEEGLSFAECQAFTLDEYVGLPREHEQSYYSTIRREFTSHIDIPDEKVFNPDGTA FT EHPGQAAQEYDRLIVEKGGVDIQILGIGTDGHIAFNEPTSSMASRTRIKTLHPDTVRDN FT SRFFNGNESQVPHHVMTQGIGTIREARHLLMLCFGENKADAVKAMVEGPVAAVCPASVL FT QLHEHATVIVDEAAAAKLEHTQYYRYALENKPDWQRF" FT misc_feature 489845..490516 FT /note="HMMPfam hit to PF01182, Glucosamine-6-phosphate FT isomerases/6-phosphogluconolactonase" FT CDS complement(490628..492664) FT /transl_table=11 FT /locus_tag="DIP0522" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor hypothetical 48.2 FT kDa protein SCC75A.17c TR:Q9RKQ7 (EMBL:AL133220) (477 aa) FT fasta scores: E(): 4.8e-06, 25.21% id in 353 aa" FT /protein_id="CAE49033.1" FT /translation="MASVQRSRFTHLLTTATIAALLPLAPVTAAAEDVEKPVTIATSGK FT LNWGIRESFNNYTNGASKVEDGATLISTNNFEFKLEKATYDAAKERTEAQFRGKIVYLK FT YCDDMKTFTNCQLDLTIKDPKIVISNEENYVEAVVDSKQYPSGEWYKSNGPVKIANLYP FT GSATVDSKDNSTEWTNVVSALANPGGVKMFSEFYGENEGLAPLSFSYDGAGAKPSLLKG FT GYIQAGNEWKSGQEYSDGHHKLVDLGDAILVAAGKKGFYLLDNDLKELQKLEVPGLGKV FT KVGAYDSAAHMYYYVDSKNKKDLMGIEVSSTSLGQPKKIATATGNIENIGYHPKTNQVV FT VISETTSDKYIPLNERETKLGILSGNTFDYKDLPKPKDLFAKDLNGLDVIGTNTPYSMM FT LDHNDVPEFLPMNDGTFILSTSSDMRADTPDSQQLFKGILISIKPDAAGTDADPYAKPM FT EGSRTNNPELNDLLHIHSNGSLIVRFDKNEHKDYSFGQILKYTDRDVEKVSERLGVDQT FT GFTGWANVGFDNKGNAIIESGSEGKLTWYDSNKKELLKDTEVRLSRGRQTFEFPHGTFI FT VREDGTIIVPNYNKSDDTNEVYSLVELVDSSKPPAVKESSDESALEKLKNKHDGSESGS FT STGGFSWSSVLGKLSTVLSIMIAAFGIGSMLAKIFNIRIPGIR" FT misc_feature complement(490649..490714) FT /note="1 probable transmembrane helix predicted for DIP0522 FT by TMHMM2.0" FT misc_feature complement(492572..492664) FT /note="Signal peptide predicted for DIP0522 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.936 between residues 31 and 32" FT CDS complement(492762..493763) FT /transl_table=11 FT /locus_tag="DIP0523" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49034.1" FT /translation="MRRLLSPRFTVPLTLAVAISTASTTQVWIPIPYAIASEPTADAMV FT EGYYYKVAPDGEKYKNTISTFAHISKTRHMYHDASRKQHYDNFHDRTRKEQLMEIHHRS FT ERACFIGKARVVLALMQAEGNTTARSLDISKVGIELDESSKALPLLEESLNTHRTLYSK FT NPTAEEAKLIDKRAILSREGKSALEDIIKALENGEDPQEYNAFSVLNWGVEKSYLDKVH FT GTHHAHSGSSHMPELKISAVSTSDKDTKDKVLADADHNRQALATSLPMPAPTVSVPLDN FT QASSTKEPGAKGVESEKTGFFQSGIWNHIVTFFKYFGIAAGLFSIFAFLANR" FT misc_feature complement(492771..492836) FT /note="1 probable transmembrane helix predicted for DIP0523 FT by TMHMM2.0" FT misc_feature complement(492924..492989) FT /note="Predicted helix-turn-helix motif with score 984 FT (+2.54 SD) at aa 259-280, sequence HNRQALATSLPMPAPTVSVPLD" FT misc_feature complement(493656..493763) FT /note="Signal peptide predicted for DIP0523 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.666 between residues 36 and 37" FT CDS 494228..494626 FT /transl_table=11 FT /gene="rpsH" FT /locus_tag="DIP0524" FT /product="30S ribosomal protein S8" FT /note="Similar to Streptomyces coelicolor 30S ribosomal FT protein S8 RpsH or SCD31.41 TR:Q9L0C6 (EMBL:AL161803) (132 FT aa) fasta scores: E(): 1.1e-38, 77.27% id in 132 aa" FT /protein_id="CAE49035.1" FT /translation="MTMTDPIADMLSRVRNANNAHHDAVSMPSSKLKANIAEILKSEGY FT IADYKVEDAKVGKTLTLDLKYGPNRQRSIEGVRRVSKPGLRVYAKSTNLPQVLGGLGVA FT IISTSHGLLTDRQATEKGVGGEVLAYVW" FT misc_feature 494240..494623 FT /note="HMMPfam hit to PF00410, Ribosomal protein S8" FT misc_feature 494258..494623 FT /note="BlastProDom hit to PD001098, PD001098" FT CDS 494642..495178 FT /transl_table=11 FT /gene="rplF" FT /locus_tag="DIP0525" FT /product="50S ribosomal protein L6" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L6 RplF or Rv0719 or MT0744 or MTCY210.38 FT SW:RL6_MYCTU (P95067) (179 aa) fasta scores: E(): 7.6e-50, FT 77.09% id in 179 aa" FT /protein_id="CAE49036.1" FT /translation="MSRVGKAPIAIPSGVDVKIDGQHVEVKGPKGTLDLTIPEPIVASI FT EDGQISVVRPDDHRKNRSLHGLSRSLVNNMVVGVTEGYTIKMEIFGVGYRVALKGKNLE FT FSLGYSHPVLIEAPEGITFAVDGNTKLSVSGIDKQKVGQIAAIIRRLRKDDPYKGKGIR FT YEGEQIRRKVGKTGK" FT misc_feature 494672..495175 FT /note="HMMPfam hit to PF00347, Ribosomal protein L6" FT misc_feature 494852..494929 FT /note="FPrintScan hit to PR00059, Ribosomal protein L6 FT signature" FT misc_feature 494885..495166 FT /note="BlastProDom hit to PD002236, PD002236" FT misc_feature 494936..494986 FT /note="FPrintScan hit to PR00059, Ribosomal protein L6 FT signature" FT misc_feature 495062..495127 FT /note="FPrintScan hit to PR00059, Ribosomal protein L6 FT signature" FT CDS 495220..495588 FT /transl_table=11 FT /gene="rplR" FT /locus_tag="DIP0526" FT /product="50S ribosomal protein L18" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L18 RplR or Rv0720 or MT0745 or MTCY210.39 FT SW:RL18_MYCTU (P95068) (122 aa) fasta scores: E(): 3.7e-28, FT 66.39% id in 122 aa" FT /protein_id="CAE49037.1" FT /translation="MGKDISTRRRIARARRHDRIRKNLRGTAETPRLVVHRSSRHMHVQ FT VIDDIAGRTLAAASTLEAEVRALEGDKKAKGAKVGQLIAERAQAAGITAIVFDRGGYKY FT HGRIAALADAAREGGLKF" FT misc_feature 495241..495585 FT /note="HMMPfam hit to PF00861, Ribosomal L18p/L5e family" FT misc_feature 495289..495585 FT /note="BlastProDom hit to PD001394, PD001394" FT CDS 495629..496255 FT /transl_table=11 FT /gene="rpsE" FT /locus_tag="DIP0527" FT /product="30S ribosomal protein S5" FT /note="Similar to Streptomyces coelicolor 30S ribosomal FT protein S5 RpsE or SCD31.44 SW:RS5_STRCO (P46790) (201 aa) FT fasta scores: E(): 1.9e-46, 66.34% id in 208 aa" FT /protein_id="CAE49038.1" FT /translation="MPGRERRDGGRSADDNQKKNDRRGGRRDDRRNQQQDERSQYIERV FT VTINRVSKVVKGGRRFSFTALVIVGDGKGMVGVGYGKAKEVPAAIQKGAEEARKNFFRV FT PMVAGTITHPVQGEAAAGIVMMRPAAPGTGVIAGGAARPVLECAGVQDILCKSLGSDNA FT INVVHATVAGLKQLNRPEEVAARRGKTLEEVAPARMLRARAGQEA" FT misc_feature 495761..496147 FT /note="HMMPfam hit to PF00333, Ribosomal protein S5" FT misc_feature 495800..495898 FT /note="ScanRegExp hit to PS00585, Ribosomal protein S5 FT signature." FT CDS 496259..496444 FT /transl_table=11 FT /gene="rpmD" FT /locus_tag="DIP0528" FT /product="50S ribosomal protein L30" FT /note="Similar to Streptomyces coelicolor 50S ribosomal FT protein L30 RpmD or SCD31.45 SW:RL30_STRCO (P46789) (60 aa) FT fasta scores: E(): 2.1e-08, 53.57% id in 56 aa" FT /protein_id="CAE49039.1" FT /translation="MALKITQHKGLVGANPKQRKNMAALGLKHINHSVVHQDTPVVRGM FT VNVVRHMVSVEEVAGE" FT misc_feature 496259..496417 FT /note="HMMPfam hit to PF00327, Ribosomal protein L30p/L7e" FT CDS 496447..496893 FT /transl_table=11 FT /gene="rplO" FT /locus_tag="DIP0529" FT /product="50s ribosomal protein L15" FT /note="Similar to Streptomyces coelicolor 50S ribosomal FT protein L15 RplO or SCD31.46 SW:RL15_STRCO (P46787) (151 FT aa) fasta scores: E(): 3.7e-32, 67.8% id in 146 aa" FT /protein_id="CAE49040.1" FT /translation="MSEPIKLHDLRPAKGANKPKTRVGRGEASKGKTAGRGTKGTKARK FT QVSAAFEGGQMPLHMRLPKLKGFKNPAKVYYQVVNVSDLEKAFPQGGEIAVADIVAKGL FT VRPKQPVKVLGNGEISVKLNVTATKFSKSAVEKIEAAGGSVTEA" FT misc_feature 496459..496761 FT /note="HMMPfam hit to PF01305, Ribosomal protein L15 amino FT terminal region" FT misc_feature 496522..496545 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 496780..496872 FT /note="ScanRegExp hit to PS00475, Ribosomal protein L15 FT signature." FT misc_feature 496780..496875 FT /note="HMMPfam hit to PF00256, Ribosomal protein L15" FT CDS 497070..497870 FT /transl_table=11 FT /locus_tag="DIP0530" FT /product="Putative transport protein" FT /note="Similar to Streptococcus pneumoniae transporter, FNT FT family, putative SP1215 TR:AAK75321 (EMBL:AE007421) (265 FT aa) fasta scores: E(): 1.4e-31, 42.24% id in 258 aa" FT /protein_id="CAE49041.1" FT /translation="MATHNPTLNDKIFGSVAKKEALLKTDFLRYFTRCILAGVYITLGT FT AFSAHVAQNVENLAPGLGSVVFAMFFFVGLGTIVILNAELVTSNMMYVSYAVVGKKTPW FT HKAALVLIVCVIGNLVGAVIIGYLLGQSAAYSGLTPESFVSVTLDHKLEKHSMGLFIEA FT MLANFVVNMAIVGCALIKDIAGKLIWLMFIIGMFVGLGLEHVVANFGLVALVGFGSEVH FT SEYFTAGYILHNWGIDFFGNLVGGGLCIGGVYAWLNRGSENYRD" FT misc_feature 497079..497852 FT /note="HMMPfam hit to PF01226, Formate/nitrite transporter" FT misc_feature order(497148..497216,497259..497327,497388..497456, FT 497541..497609,497628..497696,497772..497840) FT /note="6 probable transmembrane helices predicted for FT DIP0530 by TMHMM2.0" FT CDS complement(497871..498605) FT /transl_table=11 FT /locus_tag="DIP0531" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis FdhD protein FT homolog or Rv2899c or MT2967 or MTCY274.30c SW:FDHD_MYCTU FT (Q10820) (276 aa) fasta scores: E(): 0.0013, 28.34% id in FT 254 aa" FT /protein_id="CAE49042.1" FT /translation="MARITSLTAVDSFFCEDDQWQHGTRQRTVLNDEQLSVLIHATPYT FT TVDRVRGHDVELIHGMLRQQGVIVSAQQVSQACYCAGSVAGVNPYNRMDIDIIPVEDSP FT EPVQTSTLRCTPEQIQAAYRRLLKQADLRRKTAATHAAGIFGSDGAEIVVRECLTAHQA FT GWKVLGVAMMSEDYDNAVIFATTGLIDATVVEIARMCGCSTVVSSAPAVTSAIADAHRA FT GITLIGALGDATFKLYAGAVDL" FT CDS complement(498593..500293) FT /transl_table=11 FT /locus_tag="DIP0532" FT /product="Putative amylase" FT /note="Similar to Streptomyces coelicolor alpha-glucosidase FT AglA TR:Q9KZ09 (EMBL:AL355752) (577 aa) fasta scores: E(): FT 2.2e-97, 48.09% id in 578 aa" FT /protein_id="CAE49043.1" FT /translation="MDTRDPHAWWRDAAIYQIYPKSFASSGGPMGTLRGITSRLDYVRD FT LGVDAIWLSPFYTSPQRDGGYDVADYFSVDPLFGSNADAEELISEAHDRGLRVIFDLVP FT NHTSDQHVWFREALQAGPGSPKRNHYWFREGKGPQGCEPPNDWLSIFGGSAWTQVCARD FT DAPDSPWEHDTSWYLHLFDSSQPDLNWSNKDVVEFFDSILRFWLDRGVDGFRVDVAHGL FT AKDPELPDWQFHWTMVDGGHDSPEDVPPPPMWNREEVHQIYRHWRTVLDEYPGNRALVA FT EAWVDATTDIAHYVQPDEMNQAFNFDFLICPWRSEDLGRVIHTSLEALAPTGSPATWVM FT SNHDVVRASSRLGLSTPGARPNGIRATDEQPDADLGARRARAAHMLMYSLPGSVYIYQG FT EELNLPEHTTLDDALRQDPTYFRTEHREAGRDGCRIPLPWTSQRPGLGFSPTGQTWLPQ FT PEGWENRAVSHQESDPHSDLMLFRRMLQVRKSLNFGRGRLSPVWLKQDCLAYINSDDGR FT CDVMLIVAFDQDVAVPEGWHIALSTEECHDVVAANSAAWLLREGDSWHV" FT misc_feature complement(498992..500242) FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT CDS complement(500305..502095) FT /transl_table=11 FT /locus_tag="DIP0533" FT /product="Putative glycosilase" FT /note="Similar to Bacillus coagulans oligo-1,6-glucosidase FT MalL SW:O16G_BACCO (Q45101) (555 aa) fasta scores: E(): FT 1.3e-26, 30.98% id in 539 aa" FT /protein_id="CAE49044.1" FT /translation="MHPNCNDIAQPHPLLPMDINRALARNEPICRYFYPHTTTPTTPLV FT ITSYLTTKNTSRELSTIESMTSKSLPTRTTLSSGTFYQIYPPSFADSNKDGIGDFRGII FT SRLDYLSDLGITGIWLNACFDSPFKDGGYDVRDYTKVASRYGTHEDLVELFHQAHARGI FT AIILDLVPGHTSEQHPWFQQSAASKYTDFDDRYIWTSHAFEGGAGLAFIGGEHPRNGAY FT IINFFKSQPALNYGFAELTQPWHQPVDAPGPRANQDAMVEIMKYWLSQGADGFRVDMAD FT SLVKNDGTSKRATIGIWQSMLSQVRAEFPNAIFVSEWGTPTQAFEAGFDADFYLDWRGN FT GYNLLARNTDTPLERRDDASFFNSDSATGAQEFLDMYLPQWERTHEAGLFSFISGNHDC FT PRLAPRLNEQERALFFLFQLTMPGLPFIYYGDEIGLPYAEIPTKEGGYARTGSRTPMCW FT DSQLPNGGFSLGDAPLYLPMTDTSQNVAQQRERADSLFHHVQKLIQLRSQLPALDGFAD FT LEFDLSLLKKHPKVMVYRRTHHHGDSVLIALNAGNKPIRVELQQPQAHELFRCGDVTYP FT DLSDHSVVELGPTSGVILSV" FT misc_feature complement(500578..501846) FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT CDS 502322..503563 FT /transl_table=11 FT /locus_tag="DIP0534" FT /product="Putative sugar-binding secreted protein" FT /note="Similar to Lactococcus lactis maltose ABC FT transporter substrate binding protein MalE TR:Q9CEZ8 FT (EMBL:AE006399) (410 aa) fasta scores: E(): 8.8e-35, 33.66% FT id in 407 aa" FT /protein_id="CAE49045.1" FT /translation="MDMVHTKKILSVVAASTLVLAGCSSESDSSNKASDSGASNEATLT FT VWGPQEDQDGADGWLQSVQKEFEKAHPDYKITWKNSVVSAADAGKTVNQDPSAAADVYV FT YANDQLGSLLDSGAVGELSDDGMKQLKEQAEDTMAATVTGQDGKAYGLPIEPNTWFMYY FT NKSKLSADDVKSFDTMLEKAKVSFPISNSWYFPAFYAGAGAKFFGDDGLKADAGIDLGA FT KAGDVTKYLANVVRNPNFVNDADGSGIGGMKNGSVDVVFSGSWDANNVKEALGDNYAVA FT SLPTFKLDGKDVQMKAFSGSKAIGYNPNTKNPKIASEFAAFLASSQSQKTHFEKSGVIP FT ADKTLSTDATITADPVAGALFETVAKASILQPTIKKMSDFWEPAENFGKGLANREVTPE FT NAAQKTEAWASTLK" FT misc_feature 502322..502420 FT /note="Signal peptide predicted for DIP0534 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.253 between residues 33 and 34" FT misc_feature 502475..503530 FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding protein" FT CDS 503681..505084 FT /transl_table=11 FT /locus_tag="DIP0535" FT /product="Putative sugar ABC transport system membrane FT protein" FT /note="Similar to Lactococcus lactis maltose ABC FT transporter permease protein MalF TR:Q9CEZ7 (EMBL:AE006399) FT (452 aa) fasta scores: E(): 9.4e-61, 39.15% id in 452 aa" FT /protein_id="CAE49046.1" FT /translation="MKAASQHGGLKLKTKKTQKREDAPSPYSMSKAWNSGDGITKASLL FT VFGLGNLLRKQFAKGIAFLLIEIAAVVFFATKGVKALKELPGLGTGESERVKVDGFWVY FT QKSEPSVVLLLNGVAVVFLLIVVLWLATLAMRSAYKAQTFVEQRGKARSLKEDLYALTD FT EDAPILLMTLPTAGIIVFTILPLIFMISMAFTSYDSGHVQKFDWVGLENFAKVFANDGG FT EVNLKLFTSVLVWTLTWAFFATFLNYFIGMFLAMLIERKTTYGKAFWRAIFSLSVAVPQ FT FVTLLVLRSMLQPEGIINRMLLDAGLIDHGLPFFTDATWARVTVIVINLWIGIPYTIMQ FT VTGILQNIPGELYEAARLDGATWWQTYRNVTLPYMFFVMTPYLITTFTANVNNFNVIYL FT LSRGDPSPIGASAGKTDLLITWLYKLTVDRGDYNVGAVIGILTFIVLSVVALITYRRSG FT SYRNEEGFQ" FT misc_feature order(503849..503908,504011..504079,504182..504250, FT 504386..504454,504491..504559,504647..504715, FT 504776..504844,504974..505042) FT /note="8 probable transmembrane helices predicted for FT DIP0535 by TMHMM2.0" FT misc_feature 504710..504949 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature 504713..504799 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 505084..505962 FT /transl_table=11 FT /locus_tag="DIP0536" FT /product="Putative sugar ABC transport system membrane FT protein" FT /note="Similar to Streptococcus pneumoniae maltodextrin FT transport system permease protein MalD or SP2110 FT SW:MALD_STRPN (Q04699) (277 aa) fasta scores: E(): 2.9e-21, FT 30.85% id in 282 aa" FT /protein_id="CAE49047.1" FT /translation="MSTHKVAIKGSQRRIRRLTDIAVHLFLSILAILWVIPIIWVVAES FT FNKNSAPYTSTFFPEEYGFDNYIKLFTDHSVLNFPKMFMNTLIIACFTCVISVVFVLFV FT SYSLSRLRFRFRKVYMNIALVLGMFPGIMAVVAIYFILKAVGLTQGWTTNLALIIVYSA FT GAGMGFYVMKGFMDTIPISLDEAALLDGCTRWQVFTKIILPISKPMIVYQSIVAFLTPW FT LDFVLAKAIARTQENYTVSLGLWKMLEKEYIYDWFARFAAGAVCVSIPITILFIVMQRY FT YQESMAGSVKG" FT misc_feature 505084..505227 FT /note="Signal peptide predicted for DIP0536 by SignalP 2.0 FT HMM (Signal peptide probability 0.698) with cleavage site FT probability 0.272 between residues 48 and 49" FT misc_feature order(505144..505212,505330..505398,505435..505503, FT 505531..505599,505849..505917) FT /note="5 probable transmembrane helices predicted for FT DIP0536 by TMHMM2.0" FT misc_feature 505606..505830 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature 505609..505695 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 506046..506768 FT /transl_table=11 FT /locus_tag="DIP0537" FT /product="Putative ABC transport system membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49048.1" FT /translation="METKRKGLSLTALTAIALALLALGMLGNVVVQPTHDGYLDASLGK FT LTVGMLLETVSWAAAPIVCWLLVVLIKRGVPFIGVGILAIAVVSEVPHDVLTHQTLWTA FT ESQNPAWALLISWIVIQAFQRLPQSQLRILLAVAVVIAALIWIFGFSLGTRLGVIPLGF FT GYLAFTLVFYALWGSENRMMFSAGGVGAAMFITPALGVVVLHYRRSLTETLDPLPQLGL FT AVAYPVLLAVAAALSAVI" FT misc_feature 506046..506138 FT /note="Signal peptide predicted for DIP0537 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.892 between residues 31 and 32" FT misc_feature order(506190..506258,506436..506495,506505..506573, FT 506592..506660,506703..506762) FT /note="5 probable transmembrane helices predicted for FT DIP0537 by TMHMM2.0" FT CDS complement(506765..508018) FT /transl_table=11 FT /locus_tag="DIP0538" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 46.2 FT kDa protein SC5F8.10c TR:Q9K4L4 (EMBL:AL357613) (410 aa) FT fasta scores: E(): 2.1e-74, 50% id in 394 aa" FT /protein_id="CAE49049.1" FT /translation="MFTPQPSMQITNGTIAPALLQLPWSVPLEDWPDDVLASLPRGISR FT HTVRFVNVDGHVFAIKEIGQKAAYHEYKMLRDLNRLGAPSVQPLAVITGRVDATGQPLT FT PALVTEHLSFSLPYRAVFSQTSVSRSMRPETATRMIDSIALLLVRLHLLNFFWGDVSLS FT NTLFRRDADAFSGYLVDAETGDLQPQLSEQRRLYDVEIARVNIIGELMDLQAGGLLPSD FT VDAIEVGNRIAEKYELLWEELTGEQTINASEAWRVQQRIERLNDLGFDVSELKLKPAQV FT EGTEMLQMRPRVVDAGHHHRALMRMTGLDVQERQARRIINAIETYRAVNHKEHIPLNQV FT AHEWLTNVFEPTLASIPAEFASRLQPAQLFHEIVEHQWYLSEECGHEVPLHEATQSYIQ FT TILPNRPDEKHVLDNNVS" FT CDS complement(508133..509269) FT /transl_table=11 FT /locus_tag="DIP0539" FT /product="Putative sugar ABC transport syste ATP-binding FT protein" FT /note="Similar to Bacillus subtilis probable multiple FT sugar-binding transport ATP-binding protein MsmX FT SW:MSMX_BACSU (P94360) (365 aa) fasta scores: E(): 1.1e-54, FT 49.86% id in 367 aa" FT /protein_id="CAE49050.1" FT /translation="MASVTFDAATRIYPGATTPSVDKFTLDIADGEFLVLVGPSGCGKS FT TTLRMLAGLEEVNDGRILIGERDVTDMPPRDRDIAMVFQNYALYPHMTVRENMGFALKI FT DKRPKEEIDRRVEEAARTLDLTAFLDRKPKALSGGQRQRVAMGRAIVRKPEVFLMDEPL FT SNLDAKLRVQTRTQIAALQRKLGVTTLYVTHDQTEALTMGDRIAVLNFGKLQQVGTPRE FT LYDRPANEFVAGFIGSPAMNLGTFTVEGNHAVLGNARVPLSDATLDAITPADNGQIVIG FT FRPEALEIVPEGTPNTIPVKLHLVEELGSDAFMYGKLVGGGGLGSGTDANPDDVSTDQI FT IIRTAPHAAPPIGSVVHVRIREGAQHNFSKATGDRLPE" FT misc_feature complement(508634..509179) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(508634..509182) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(508646..508864) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(508820..508864) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(509108..509173) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(509135..509158) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 509759..511081 FT /transl_table=11 FT /gene="secY" FT /locus_tag="DIP0540" FT /product="preprotein translocase SecY subunit" FT /note="Similar to Corynebacterium glutamicum preprotein FT translocase SecY subunit SW:SECY_CORGL (P38376) (440 aa) FT fasta scores: E(): 1.6e-147, 86.13% id in 440 aa" FT /protein_id="CAE49051.1" FT /translation="MSAIFQAFRDADLRKKILITIALIILYRIGAQIPSPGVDYASISG FT RLRELTSDSSSVYSLINLFSGGALLQLSIFAIGVMPYITASIIVQLLTVVIPKFEELKK FT EGQSGQAKMDQYTRYLTLGLALLQSSGIVALADREQLLGSGVSVLKEDRNLWTLVMLVL FT VMSAGAILVMWLGEIITERGIGNGMSLLIFAGIATRIPSDGANILSSSGGVVFAVVLVA FT VIVLVVGVVFVEQGQRRIPVQYAKRMVGRRQYGGSSTYLPLKVNQAGVIPVIFASSLIY FT MPVLITQIINSGSHEVSDNWWQRNVIQYLQTPSSWQYIVLYFALIIFFSYFYVSVQYDP FT NEQADNMKKYGGFIPGIRPGRPTAEYLGYVMNRLLFVGALYLGIIAVLPNIALDLGVGA FT SSAGSTPFGGTAILIMVSVALTTVKQIESQLLQSNYEGLLK" FT misc_feature 509807..509863 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature order(509807..509860,509978..510046,510104..510163, FT 510221..510289,510308..510361,510389..510457, FT 510560..510628,510704..510772,510878..510937, FT 510950..511018) FT /note="10 probable transmembrane helices predicted for FT DIP0540 by TMHMM2.0" FT misc_feature 509972..510034 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature 509975..510034 FT /note="ScanRegExp hit to PS00755, Protein secY signature FT 1." FT misc_feature 509975..511033 FT /note="HMMPfam hit to PF00344, eubacterial secY protein" FT misc_feature 510095..510166 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature 510221..510298 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature 510278..510331 FT /note="ScanRegExp hit to PS00756, Protein secY signature FT 2." FT misc_feature 510299..510370 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature 510302..510358 FT /note="ScanRegExp hit to PS00095, C-5 cytosine-specific DNA FT methylases C-terminal signature." FT misc_feature 510560..510619 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature 510704..510772 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature 510869..510925 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT misc_feature 510980..511036 FT /note="FPrintScan hit to PR00303, Preprotein translocase FT SecY subunit signature" FT CDS 511081..511626 FT /transl_table=11 FT /gene="adk" FT /locus_tag="DIP0541" FT /product="adenylate kinase" FT /EC_number="2.7.4.3" FT /note="Similar to Mycobacterium tuberculosis adenylate FT kinase Adk or Rv0733 or MT0757 or MTV041.07 SW:KAD_MYCTU FT (O53796) (181 aa) fasta scores: E(): 2.5e-33, 57.45% id in FT 181 aa" FT /protein_id="CAE49052.1" FT /translation="MRLVLLGPPGAGKGTQAAILSEKLRIPHISTGDLFRANIGEGTPL FT GKEAKSYIDAGKLVPTDVTARMVKARLQKDDAEVGFLLDGFPRTVEQAEILKEMLKGFG FT VELNGVINYEVAEDVVVERMLARGRADDNEDTIRTRLQVYRDETAPLIRHYGDDIITIK FT AEGSIEDINARTLGALGK" FT misc_feature 511090..511131 FT /note="FPrintScan hit to PR00094, Adenylate kinase FT signature" FT misc_feature 511093..511551 FT /note="BlastProDom hit to PD000657, PD000657" FT misc_feature 511093..511560 FT /note="HMMPfam hit to PF00406, Adenylate kinase" FT misc_feature 511174..511218 FT /note="FPrintScan hit to PR00094, Adenylate kinase FT signature" FT misc_feature 511321..511356 FT /note="ScanRegExp hit to PS00113, Adenylate kinase FT signature." FT misc_feature 511321..511371 FT /note="FPrintScan hit to PR00094, Adenylate kinase FT signature" FT misc_feature 511465..511512 FT /note="FPrintScan hit to PR00094, Adenylate kinase FT signature" FT misc_feature 511516..511560 FT /note="FPrintScan hit to PR00094, Adenylate kinase FT signature" FT CDS 511740..512534 FT /transl_table=11 FT /gene="mapA" FT /locus_tag="DIP0542" FT /product="methionine aminopeptidase" FT /EC_number="3.4.11.18" FT /note="Similar to Bacillus subtilis methionine FT aminopeptidase Map SW:AMPM_BACSU (P19994) (248 aa) fasta FT scores: E(): 4.3e-41, 47.82% id in 253 aa" FT /protein_id="CAE49053.1" FT /translation="MGFRSKRKVIPAKTPGELDAMQAAGEIVGEALQAVRAAAAVGVST FT LELDAIAEQAIRDRGAIPTFKGYGGFPGSICASVNDVIVHGIPNKETILKEGDLVSIDC FT GATLDGWVGDSAWTFGIGTIADDVRALNEATEWVLYEGMKAMIPGNRLTDVSHALEMAT FT RAAEKKFNVQLGIVDGYGGHGIGHEMHEEPYLANEGKGGRGPMIQEGSVLAIEPMLTLG FT SVDSIVLADEWTVVTDDNSWSSHWEHTVAATNDGPRILTPRK" FT misc_feature 511770..512513 FT /note="HMMPfam hit to PF00557, metallopeptidase family M24" FT misc_feature 511962..512003 FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT misc_feature 512031..512081 FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT misc_feature 512259..512297 FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT misc_feature 512352..512390 FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT CDS 512872..515037 FT /transl_table=11 FT /locus_tag="DIP0543" FT /product="Putative sialidase precursor" FT /note="Similar to Micromonospora viridifaciens sialidase FT precursor NedA SW:NANH_MICVI (Q02834) (647 aa) fasta FT scores: E(): 4e-06, 33.62% id in 455 aa. Note: Contains a FT potential colied-coil region at residues 518..639" FT /protein_id="CAE49054.1" FT /translation="MHSSNRTYSRAILGLSAALTLSFTSLVAPVNAEELETVVPAIAEQ FT EGEAPATLPSAETGLFDAAPPKPVARGAAGDLQLPAVNEEEVFEEGRVIRPPDENGKRC FT YRIPALITAKDGSLLLAFDDRYGPDEKSKTWCRDAPYDPGKSSATIKQTDIALYRSVND FT GKSFENYGFIAQGTKDSRGLSYTDPALVVDRSSGKIFAFFVRGYDKRVAQAVSGYHSGN FT VEGPITNRNVQDTIVIESEDNGRTWKNMKLISNLTDKVVVGGKTYTGRGRFVTSGSGVQ FT LKFGLHAGRLIVPIAVDIDPSDSAKFVNLAIYSDDGGDTWEIGEGVAGVGYVSGDENKI FT IELSDGRLMMNSKEFKGGMRWSSYSEDQGKTWSDPVDHLIAPPDHPNMYNAGINVGLIK FT AYPNAVKGSAASKVLLFSAPINRRNGSDYGVDGRENGWVMGSCDDGKTWSFGRQVEKNR FT FQYSSMTVMSDGSIGMVYESGTREEGMNLKFAKFNMAWLGADCLSNEALGLTGDIDKEI FT VAAQEKAAAATKEAQEAAEKVEKLTEELAAARKENDELKTQVKESEEAVGDLADKVFKL FT ENAVTEAKKKATVAEKAVSDALAKLQEAESIAEEQKAKAESAAAEAQALREKLEKLEGS FT ILTAKENSEAEESADLSSTARDAADTARRAATDANGALSGQKQNEEKPAMGLMGILKVL FT AGIIPLVAIIATIFQTFRLPFNIPGMR" FT misc_feature 512872..512967 FT /note="Signal peptide predicted for DIP0543 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.907 between residues 32 and 33" FT misc_feature 513286..513309 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 513343..513378 FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature 513583..513618 FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature 513805..513840 FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature 513958..513993 FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature 514186..514221 FT /note="HMMPfam hit to PF02012, BNR repeat" FT misc_feature 514189..514212 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 514426..514887 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature 514948..515016 FT /note="1 probable transmembrane helix predicted for DIP0543 FT by TMHMM2.0" FT CDS 515101..515910 FT /transl_table=11 FT /locus_tag="DIP0544" FT /product="Putative secreted protein" FT /note="Similar to Streptomyces coelicolor putative secreted FT protein 3SC5B7.14c TR:Q9EWT5 (EMBL:AL449216) (231 aa) fasta FT scores: E(): 9.9e-08, 30.99% id in 242 aa" FT /protein_id="CAE49055.1" FT /translation="MICDMPTVVSFLIFLMSVTIVTLMSYKPRHAKPSATRRRVTAVIG FT ATATSAALLTAQPATASAAPLSSGSSATSSINDQLQTIGQQTRDGAWNLRNALISQADA FT LPIEVAAPIKNGIDATVNLFFPGLIQERTFVAPPPPPAPAPAPAAPEFDRGSCPPAARA FT CIDLAQQRAWLQQDGRVVYGAVPISSGRPGWETPQGVFHVNRKVKDEISREFNNAPMPY FT SVYFTNNGIAFHQDNPNVMSHGCIHLWHNDAVTFFNTLQYGDMVYVY" FT misc_feature 515101..515289 FT /note="Signal peptide predicted for DIP0544 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.926 between residues 63 and 64" FT CDS 516214..516432 FT /transl_table=11 FT /gene="infA" FT /locus_tag="DIP0545" FT /product="translation initiation factor IF-1" FT /note="Similar to Mycobacterium tuberculosis translation FT initiation factor IF-1 InfA or Rv3462c or MT3568 or ML1962 FT or MTCY13E12.15c or MCB1222.32c SW:IF1_MYCTU (P45957) (72 FT aa) fasta scores: E(): 6.2e-26, 91.42% id in 70 aa" FT /protein_id="CAE49056.1" FT /translation="MAKEGAIEVEGRIIEPLPNAMFRVELDNGHKVLAHISGKMRQHYI FT RILPEDRVVVELSPYDLTRGRIVYRYK" FT misc_feature 516217..516429 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 516223..516429 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 516388..516417 FT /note="ScanRegExp hit to PS00215, Mitochondrial energy FT transfer proteins signature." FT CDS 516618..516986 FT /transl_table=11 FT /gene="rpsM" FT /locus_tag="DIP0546" FT /product="30S ribosomal protein S13" FT /note="Similar to Mycobacterium leprae 30S ribosomal FT protein S13 RpsM or ML1960 or MLCB1222.30c SW:RS13_MYCLE FT (Q9X7A1) (124 aa) fasta scores: E(): 5.3e-36, 81.96% id in FT 122 aa" FT /protein_id="CAE49057.1" FT /translation="MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLEETGISPDLRT FT DNLTDEQVSALRDVIEATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTK FT TNARTRKGPKKTIAGKKK" FT misc_feature 516624..516944 FT /note="HMMPfam hit to PF00416, Ribosomal protein S13/S18" FT misc_feature 516627..516953 FT /note="ProfileScan hit to PS50159, Ribosomal protein FT S13/S18 family." FT misc_feature 516636..516944 FT /note="BlastProDom hit to PD001363, PD001363" FT misc_feature 516879..516920 FT /note="ScanRegExp hit to PS00646, Ribosomal protein S13 FT signature." FT CDS 516990..517394 FT /transl_table=11 FT /gene="rpsK" FT /locus_tag="DIP0547" FT /product="30S ribosomal protein S11" FT /note="Similar to Streptomyces coelicolor 30S ribosomal FT protein S11 RpsK or SC6G4.06 SW:RS11_STRCO (P72403) (134 FT aa) fasta scores: E(): 7.3e-39, 80.59% id in 134 aa" FT /protein_id="CAE49058.1" FT /translation="MPPKTRSTARRSGRRVVKKNVAQGHAYIKSTFNNTIVSITDPSGA FT VIAWASSGHVGFKGSRKSTPFAAQLAAENAARKAMDHGMKKVDVFVKGPGSGRETAIRS FT LQAAGLEVTSISDVTPQPFNGCRPPKRRRV" FT misc_feature 517059..517388 FT /note="HMMPfam hit to PF00411, Ribosomal protein S11" FT misc_feature 517059..517391 FT /note="BlastProDom hit to PD001010, PD001010" FT CDS 517418..518023 FT /transl_table=11 FT /gene="rpsD" FT /locus_tag="DIP0548" FT /product="30S ribosomal protein S4" FT /note="Similar to Mycobacterium leprae 30S ribosomal FT protein S4 RpsD or ML1958 or MLCB1222.28c SW:RS4_MYCLE FT (Q9X799) (201 aa) fasta scores: E(): 2.7e-59, 77.11% id in FT 201 aa" FT /protein_id="CAE49059.1" FT /translation="MARYTGPATRKSRRLRVDLVGGDMAFERRPYPPGQAGRARIKESE FT YLLQLQEKQKARFTYGVLEKQFRRYYAEANRLPGKTGDNLVILLESRLDNVVYRAGLAR FT TRRQARQLVSHGHFTVNGKKINVPSYRVSQYDIIDVREKSQKMIWFEEAQENLLDAVVP FT AWLQVVPSTLRILVHQLPERAQIDVPLQEQLIVELYSK" FT misc_feature 517418..517687 FT /note="HMMPfam hit to PF00163, Ribosomal protein S4/S9 FT N-terminal domain" FT misc_feature 517637..517660 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 517682..517756 FT /note="ScanRegExp hit to PS00632, Ribosomal protein S4 FT signature." FT misc_feature 517688..517831 FT /note="HMMPfam hit to PF01479, S4 domain" FT misc_feature 517688..517882 FT /note="HMMSmart hit to SM00363, S4 RNA-binding domain" FT CDS 518105..519121 FT /transl_table=11 FT /gene="rpoA" FT /locus_tag="DIP0549" FT /product="DNA-directed RNA polymerase alpha chain" FT /EC_number="2.7.7.6" FT /note="Similar to Mycobacterium tuberculosis DNA-directed FT RNA polymerase alpha chain RpoA or Rv3457c or MT3564 or FT MTCY13E12.10c SW:RPOA_MYCTU (O06324) (347 aa) fasta scores: FT E(): 9.8e-96, 73.04% id in 345 aa" FT /protein_id="CAE49060.1" FT /translation="MLISQRPTLTEEYVDSARSRFVIEPLEPGFGYTLGNSLRRTLLSS FT IPGAAVTSIKIDGVLHEFTTINGVKEDVSDIILNIKGLVLSSDSDEPVVMYLRKEGAGV FT ITAGDIEPPAGVEIHNPDLHLATLNEQGRLDIEMIVERGRGYVPATLYSGPAEIGRIPV FT DQIYSPVLKVSYKVEATRVEQRTDFDKLIIDVETKNSMAPRDALASAGKTLVELFGLAR FT ELNTAAEGIEIGPSPQETEYIAAYGMPIEDLNFSVRSYNCLKRQEIHTVGELAECTESD FT LLDIRNFGQKSINEVKIKLAGLGLTLKDAPEDFDPTQLDGYDAATGDYIDTDPEETE" FT misc_feature 518117..519004 FT /note="BlastProDom hit to PD001179, PD001179" FT misc_feature 518156..518758 FT /note="HMMPfam hit to PF01000, Bacterial RNA polymerase, FT alpha chain" FT misc_feature 518720..518743 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 518807..519010 FT /note="HMMPfam hit to PF03118," FT CDS 519202..519675 FT /transl_table=11 FT /gene="rplQ" FT /locus_tag="DIP0550" FT /product="50S ribosomal protein L17" FT /note="Similar to Mycobacterium leprae 50S ribosomal FT protein L17 RplQ or ML1956 or MLCB1222.26c SW:RL17_MYCLE FT (Q9X797) (170 aa) fasta scores: E(): 3.1e-26, 58.86% id in FT 158 aa" FT /protein_id="CAE49062.1" FT /translation="MPTPKKGARLGGSASHQKKILANLASQLIEHEAIKTTDAKAKLLR FT PYVEKLITKAKGGSVADRRNVAKFITNKEIVAKLFNELAPKFENREGGYTRIIKLENRK FT GDNAPMSQISLVLEETVSAEATRAARAAASKKAEEPAEAVEAEAPAADEAEEK" FT misc_feature 519217..519549 FT /note="BlastProDom hit to PD004277, PD004277" FT misc_feature 519259..519549 FT /note="HMMPfam hit to PF01196, Ribosomal protein L17" FT misc_feature 519301..519369 FT /note="ScanRegExp hit to PS01167, Ribosomal protein L17 FT signature." FT CDS 519770..520657 FT /transl_table=11 FT /gene="truA" FT /locus_tag="DIP0551" FT /product="tRNA pseudouridine synthase A" FT /EC_number="4.2.1.70" FT /note="Similar to Mycobacterium tuberculosis tRNA FT pseudouridine synthase A TruA or Rv3455c or MT3562 or FT MTCY13E12.08c SW:TRUA_MYCTU (O06322) (297 aa) fasta scores: FT E(): 2.4e-57, 55.24% id in 286 aa" FT /protein_id="CAE49063.1" FT /translation="MLLALIAMINGTVRIRLDLAYDGTDFHGWARQGDSDLRTVQKIIE FT DTLTLVLQRPIDLTVAGRTDAGVHATGQVAHFDVDPAALETRSIAGDPARLIRRLARLM FT PDDVRIHNMSFVPAEFDARFSALRRHYVYRVTTHPRGALPTRARDTAHWPRSVDISAMQ FT AAADALIGMHDFAAFCKYREGASTIRDLQEFTWHDVSTPQEPQLYEAHVTADAFCWSMV FT RSLVGACLVVGEGKRADGFTEHLLGETKRSSSIPVAAACGLSLVGVDYPSDDQLGARAE FT QARAYRTHDELPSL" FT misc_feature 519884..520519 FT /note="HMMPfam hit to PF01416, tRNA pseudouridine synthase" FT CDS 520801..522099 FT /transl_table=11 FT /locus_tag="DIP0552" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3556 TR:AAK47896 FT (EMBL:AE007159) (482 aa) fasta scores: E(): 8.1e-16, 29.36% FT id in 487 aa" FT /protein_id="CAE49064.1" FT /translation="MTNNQRPARGISPASKAQVSGYKFLQRRAELGLLLGDVRMLHDPI FT AKLRRGLLFGLSAAVLLGVGSGALAVFSPAADPGDAPIMRSDSGDLFVRVDQQIHPVAN FT LASARLVAGEPAQPVKASDSILAREHIGVPIGIPDAPRIVPEKSQEQPAWHVCHWDDAV FT EVTQVHDPHQRDFPAVADNTALVAATPFVEYLIVDSTRYLLPPADSPEGRSIRRRIGMT FT ESTVRWRPPAEVISLIPEGPPIALPAPESEILHSGKSSWLNINAHVVELSDLHLAILND FT LGWRASHVPAAAINDLPDSQEPLRLPERKYTFEEAALPPLCIGFIWQDDHDTQPRWDLK FT VFQRDKDAENLAVELSGDSPATHYAGTGMSQAVDTGSGWHVVSEHGQRHTLMTQENAHI FT LGFKEFYRVPWEVVGLLPEGSALTAEAALAPLY" FT misc_feature 520954..521022 FT /note="1 probable transmembrane helix predicted for DIP0552 FT by TMHMM2.0" FT CDS 522208..522630 FT /transl_table=11 FT /locus_tag="DIP0553" FT /product="Putative membrane protein" FT /note="Low similarity to Streptomyces coelicolor putative FT membrane protein SCl2.30c TR:Q9L269 (EMBL:AL137778) (150 FT aa) fasta scores: E(): 1.9e-06, 35.48% id in 93 aa" FT /protein_id="CAE49065.1" FT /translation="MSSMRDSVADHLERLNRHHENLKHTRYGFIVRPLVLTLGWIVVVV FT GIITIPFPGPGWLTVFIGIAILSLELHWASNLLAWGVRLYDRFFSWYHVQSTRMRYSLI FT AATIVACWIVGGGIAIVMWKCGMLGILDPIFTPVFS" FT misc_feature 522208..530886 FT /note="Putative ESAT-6 gene cluster. Conserved genomic FT organisation as in Mycobacterium tuberculosis ESAT-6 gene FT cluster region 4: Encode putative T-cell antigens that lack FT detectable secretion signals (Ref: Gey van Pittius, et al. FT Genome Biology (2001), 2(10):research 0044.1-0044.18)" FT misc_feature order(522289..522357,522385..522453,522508..522576) FT /note="3 probable transmembrane helices predicted for FT DIP0553 by TMHMM2.0" FT CDS complement(522858..523757) FT /transl_table=11 FT /locus_tag="DIP0554" FT /product="Putative subtilisin-like cell wall associated FT serine protease (mycosin)" FT /note="Similar to Streptomyces coelicolor serine protease FT SC3C3.08 TR:O86642 (EMBL:AL031231) (413 aa) fasta scores: FT E(): 4e-11, 32.37% id in 278 aa and to Mycobacterium FT tuberculosis hypothetical 46.0 kDa protein Rv3449 or FT MTCY13E12.02 or MT3555 SWALL:O06316 (EMBL:Z95390) (455 aa) FT fasta scores: E(): 4.7e-10, 38.11% id in 307 aa" FT /protein_id="CAE49066.1" FT /translation="MKTTGIIAIVLAVAWYCALPESVSAQQRCAVSAPLSDEQQSASDH FT WQVLPELHRIATGRGVTVAVIDTGISPHPRLPRLIDGGSYLSGSYTPTGGLHDCDAHGT FT VVASIIAGQPGPDPVLGVAPESQLISIQQTSNTAASGTVASLAHAIHTAIDQHAQIINI FT SVVSCVASNHAVDDAVLVEALRRAEESGTVVVSAAGNATGSTDDCVHGARVFPAHYPTV FT LTVGALKDPYHFADYSMPSPFPLVSALGYVPAALAHDHPGISGGTLNHRSVYPFQGTSF FT AAPLCFRCCCIDKAAFPR" FT misc_feature complement(522879..522929) FT /note="FPrintScan hit to PR00723, Subtilisin serine FT protease family (S8) signature" FT misc_feature complement(523044..523592) FT /note="HMMPfam hit to PF00082, Subtilase family" FT misc_feature complement(523422..523454) FT /note="ScanRegExp hit to PS00137, Serine proteases, FT subtilase family, histidine active site." FT misc_feature complement(523425..523466) FT /note="FPrintScan hit to PR00723, Subtilisin serine FT protease family (S8) signature" FT misc_feature complement(523527..523586) FT /note="FPrintScan hit to PR00723, Subtilisin serine FT protease family (S8) signature" FT misc_feature complement(523539..523571) FT /note="ScanRegExp hit to PS00136, Serine proteases, FT subtilase family, aspartic acid active site." FT misc_feature complement(523683..523757) FT /note="Signal peptide predicted for DIP0554 by SignalP 2.0 FT HMM (Signal peptide probability 0.994) with cleavage site FT probability 0.890 between residues 25 and 26" FT CDS complement(523770..525185) FT /transl_table=11 FT /locus_tag="DIP0555" FT /product="Putative surface-anchored membrane protein" FT /note="Very low similarity to Mycobacterium tuberculosis FT hypothetical protein Rv3448 or MTCY77.20 or MT3554 FT SWALL:O33354 (EMBL:Z95390) (467 aa) fasta scores: E(): FT 0.0016, 21.96% id in 478 aa. Note: Contains a putative FT sortase anchor site (LPNTG)" FT /protein_id="CAE49067.1" FT /translation="MQSMLHDVRLRFQIDASNGGHDSLAEVDISVPSQSTFSEIVPEVL FT GLAQQVSEQPLTDPEVPVWQVISPAGLPYDMYAPVHTLQLSHGSSMIIRPHRPQAAPVI FT RDSAEALAHCSRSNAAARGTTECAAMAGALVIVLLGLRLPVESVPLSARWGAIAALLSI FT AFVITTRPLLLIPWLLATWSSVFFFLLGDSFTAVSHATSLSIVHTVLAAGTVALVVLAG FT IMVAARVSLWPIAHWLSGIVTIVVCSFASAPAGWLHRDREFDVHGWFNGAASGVILCAV FT AVIVAGPSLALRVSAMPIPRLPNTGQDLTVSDKVESPSDMMFKAQKASAIFQGMYVGSA FT LSLAFAMAYLAVSPSVSGYCVALCTFATVVCVFHAHRCPDAYSTWALWVAGMLGMIAAT FT NGALDVFAWPWIVVSIFAAGSTISAPVWVHKLSSVAPTTTQWLHRVESLAVAAIVPLAA FT HLMGIFSLLRGLG" FT misc_feature complement(order(523776..523841,523902..523967, FT 523980..524030,524067..524117,524130..524195, FT 524307..524372,524418..524483,524505..524570, FT 524616..524669,524685..524735,524751..524816)) FT /note="11 probable transmembrane helices predicted for FT DIP0555 by TMHMM2.0" FT misc_feature complement(524268..524282) FT /note="potential sortase anchor site LPNTG" FT CDS 525441..528980 FT /transl_table=11 FT /locus_tag="DIP0556" FT /product="Putative FtsK/SpoIIIE family ATP-binding protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT FtsK/SpoIIIE family protein MT3553 TR:AAK47893 FT (EMBL:AE007159) (1200 aa) fasta scores: E(): 1.7e-97, FT 37.59% id in 1221 aa" FT /protein_id="CAE49068.1" FT /translation="MSLLRILMPVIMITVVIAMVGLMVISGGSLNPMMLIFPLMMGMSL FT LMMMSPTHGEDVNEMRRVYLRHLIALRDTALHYGEQQRQHQCYRNPPPHHLVQWVETLR FT LWERQSQDSDALEVRIGVGPTLLCTPIEMKNPGAPEDLDPVCAVSLRSTIRAVRTVHEV FT PISVQLQAFAFVMVTGDRAHDLVRAIIAQLCFHHGPECVGITVATTGADQPKWWKWLPH FT TKDPQSARFEVLIVDFTVAHPEQHDALITQILQSSATTVIILGEPDSDAPQRSDFMIIM FT RESGFQLDAGTKLVAVTESGREVLGKSDTLSQVAAEHFARSLTGKIRPQHQVATTSDLR FT FLLGLGIPTPDTVSMRWEERGAQRLTVPLGLTDAGTAMMLDIKESAHGGVGPHGLCVGA FT TGSGKSELLRTLVVAMAATHSPQSVNFVLVDFKGGATFLGLDALPHTSAVITNLEDEAV FT LVERMHDAISGEMNRRQELLRQAGNFINVGEFNQASSQGKIAHDPIPALFIVLDEFSEL FT LGQHPDFADLFVAVGRLGRSLHIHLLLASQRLEEGRLRGLDSHLSYRIGLKTFSAAESR FT QVLGIPDAYEIPNQPGTGFIKTGADTIVKFRASYVSGPMKQARGISATGSATVRPWNGW FT EDEHNDTESITNDAPSMPLPTLVDAVVTAAQQRATELGLNAHKIWLPPLPNTLEISELP FT AATPGQLTAHVGLIDRPYRQRQDPLAMNFEGHNGHAAICGGPQTGKTAALRTIVTALAA FT GNHTDTVRFYIADLSGQGLAQLQALPHVAGIASRHESEKLGRMVDDILHLIDHPEQRHT FT FFIIDGWHIVAQEHEHLVESFNRIAADGLAANIHLIITTPRWTTLRPAIRDLITQRLEL FT KLGEALDSLIDRKAQSKLPTRPGVGLTPTKEHMMLARSSNQDIAHVAQLCSNQPQVPQL FT KLLPTAVELHELASLSEKEHTTGIRLGIHGRDLTTFTWDTKTSNHLLIFGSQGCGKSTT FT VATILAGICKRGPEAARCVVIDHRRAHLGTIDPTMLAAYSASTTATEQTLASTVITLES FT RLPGPEITPEQLRQRSWWTGPDIFLVIDDADLIPEPLWHRLVELIPHSRDIGLHIVAAR FT KIGGSQRALYQSFYSAIKDQSPMVLVMDGERDDGPLFGIRPQRLIPGRAIAVIRGSNQG FT QCHIAQNIPEIAS" FT misc_feature 525441..525602 FT /note="Signal peptide predicted for DIP0556 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.600 between residues 54 and 55" FT misc_feature 525459..525527 FT /note="1 probable transmembrane helix predicted for DIP0556 FT by TMHMM2.0" FT misc_feature 525462..525587 FT /note="ProfileScan hit to PS50320, Methionine-rich region." FT misc_feature 526341..526364 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 526494..527093 FT /note="HMMPfam hit to PF01580, FtsK/SpoIIIE family" FT misc_feature 526611..527153 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 526632..526655 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 527505..528179 FT /note="HMMPfam hit to PF01580, FtsK/SpoIIIE family" FT misc_feature 527616..528065 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 527640..527663 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 528354..528914 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 528378..528401 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 529045..530034 FT /transl_table=11 FT /locus_tag="DIP0557" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49069.1" FT /translation="MPYQRTPTDLTLTVLDTATIYEGPTTVYRYDLPGHGITEGWATDA FT VIDQIQELLNTSWPNCVIEIDAQPSIIELLEQPLSDHGVRIRRRKEQHKKENNTADHTE FT DITKPISALRRALNAQEQTRRGRHQKISRRIEPLYIAMALVICIVGAVAWWSTDAALNS FT DDTKVAVGESKASEQAAASATTSAPIHLAGDMIAEHERIRVTLPRGYVLALKPNDPSTV FT VATGPDPELRILLSAEPIDAADPPLIHQEIRNTIDLDPALSLREDRLAKNVPVLAYQET FT PDDGSTIAWWAWVENKHLFSVGCHSKTAQKVAHKAACRKAAETVHIKQ" FT misc_feature 529447..529515 FT /note="1 probable transmembrane helix predicted for DIP0557 FT by TMHMM2.0" FT CDS 530237..530554 FT /transl_table=11 FT /locus_tag="DIP0558" FT /product="Conserved hypothetical CFP-10-like protein" FT /note="Very low similarity to Mycobacterium tuberculosis FT hypothetical 13.5 kDa protein Rv3445c or MTCY77.17c FT TR:O06262 (EMBL:Z95389) (125 aa) fasta scores: E(): 0.0007, FT 31.52% id in 92 aa" FT /protein_id="CAE49070.1" FT /translation="MSQGFKTEADVMRNTAHRVDDTNQEVSAELSRLRSIVDGVRASWE FT GTAQVSFDNLMQRWDASAKGLQDALQSISDNIRGNATSFENVEADNQSAFSAVGGQGLA FT L" FT misc_feature 530366..530374 FT /note="Putative ESAT-6-like WXG100 family protein conserved FT motif (WXG)" FT CDS 530599..530886 FT /transl_table=11 FT /locus_tag="DIP0559" FT /product="Conserved hypothetical ESAT-6-like protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 11.1 kDa protein Rv3444c or MTCY77.16c TR:O06261 FT (EMBL:Z95389) (100 aa) fasta scores: E(): 1e-08, 35.48% id FT in 93 aa" FT /protein_id="CAE49071.1" FT /translation="MEKIKYGFGEIEAAASDIQSTSGRINSLLEDLKAHIRPMAAAWEG FT ESAQAYNEAQQQWDSSAAELNTILSTISNTVRQGNDRMSEVNRMAAASWS" FT misc_feature 530725..530733 FT /note="Putative ESAT-6-like WXG100 family protein conserved FT motif (WXG)" FT CDS 530900..531049 FT /transl_table=11 FT /locus_tag="DIP0560" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49072.1" FT /translation="MRRQLGNLVEVFTEPTEYIRQTHRHEKSGGHLRIDGAQVVTTHGG FT GIAQ" FT CDS 531311..531754 FT /transl_table=11 FT /gene="rplM" FT /locus_tag="DIP0561" FT /product="50S ribosomal protein L13" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L13 RplM or Rv3443c or MT3548 or MTCY77.15c FT SW:RL13_MYCTU (O06260) (147 aa) fasta scores: E(): 1.4e-36, FT 66.89% id in 145 aa" FT /protein_id="CAE49073.1" FT /translation="MSTYHPKSGDITRKWYVIDATDVVLGRLATHAADLLRGKGKPQFA FT PNVDCGDHVIVINADKVHVSSNKREREMRYRHSGYPGGLKTMTLGRSLEVHPERVVEES FT IRGMMPHNRLSRASVKKLHVFAGSEHPYAAQKPETYEFKQVAQ" FT misc_feature 531353..531736 FT /note="HMMPfam hit to PF00572, Ribosomal protein L13" FT misc_feature 531359..531700 FT /note="BlastProDom hit to PD001791, PD001791" FT CDS 531751..532284 FT /transl_table=11 FT /gene="rpsI" FT /locus_tag="DIP0562" FT /product="30S ribosomal protein S9" FT /note="Similar to Mycobacterium tuberculosis 30S ribosomal FT protein S9 RpsI or Rv3442c or MT3547 or MTCY77.14c FT SW:RS9_MYCTU (O06259) (151 aa) fasta scores: E(): 8.2e-33, FT 66.89% id in 145 aa" FT /protein_id="CAE49074.1" FT /translation="MSDQNVTENFEADAADIAAAAAATEEFTNTIGDVVAPEAEVETAA FT PVLHEGPIQTVGRRKRAIVRVRMVEGSGQFTCNGRTLEEYFPNKLHQQLIKAPLALIDR FT DGQFDIQATLTGGGPTGQAGAFRLAIARALNVYNPADRAALKKAGFLTRDARAVERKKA FT GLHKARRAPQYSKR" FT misc_feature 531919..532281 FT /note="BlastProDom hit to PD001627, PD001627" FT /note="HMMPfam hit to PF00380, Ribosomal protein S9/S16" FT misc_feature 532096..532152 FT /note="ScanRegExp hit to PS00360, Ribosomal protein S9 FT signature." FT CDS 532453..533796 FT /transl_table=11 FT /locus_tag="DIP0563" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT phosphoglucomutase/phosphomannomutase family protein MT3546 FT TR:AAK47887 (EMBL:AE007159) (448 aa) fasta scores: E(): FT 1.9e-100, 65.62% id in 448 aa, and to Escherichia coli FT protein MrsA or B3176 SW:MRSA_ECOLI (P31120) (445 aa) fasta FT scores: E(): 9.6e-62, 45.79% id in 452 aa" FT /protein_id="CAE49075.1" FT /translation="MTRLFGTDGVRGLANRKLTALLALKLGAAAAEVLTKDNRSTSRRP FT VAVVGRDPRVSGEMLAAALSAGMASRGVDVLRVGVLPTPAVAYLTDFYGADMGVVISAS FT HNPMPDNGIKFFSKGGHKLPDSVEDEIEKVMETIPDGGPTGHGIGRVIEEAVDAQETYL FT KHLKGAVPRSLEGITVVVDCANGAASEVAPLAYAAAGAKVIPIHNHPNAYNINDSCGST FT HIDQVQAAVLEHGADLGLAHDGDADRCLAVDAEGNVVDGDQIMAILALAMKENGELHKS FT TLVATVMSNLGLRLAMKEAGIELRTTKVGDRYVLEELNAGGFSLGGEQSGHIVLPDHGT FT TGDGTLTGLSLMSRMAETGLSLKVLASAMTVLPQVLINVPVSDKTIIQTHPDVVAAMER FT ASDELGEDGRVLLRPSGTEELFRVMVEAPSKETARRIAADLASVVAKI" FT misc_feature 532453..532884 FT /note="HMMPfam hit to PF02878, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain I" FT misc_feature 532741..532785 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 532744..532773 FT /note="ScanRegExp hit to PS00710, Phosphoglucomutase and FT phosphomannomutase phosphoserine signature." FT misc_feature 532930..533226 FT /note="HMMPfam hit to PF02879, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain II" FT misc_feature 532978..533037 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 533158..533205 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 533230..533568 FT /note="HMMPfam hit to PF02880, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain III" FT misc_feature 533434..533793 FT /note="ProfileScan hit to PS50239, Phospholipid and FT glycerol acyltransferase (from 'motifs_6.msf')." FT misc_feature 533578..533790 FT /note="HMMPfam hit to PF00408, FT Phosphoglucomutase/phosphomannomutase, C-terminal domain" FT CDS 533901..534200 FT /transl_table=11 FT /locus_tag="DIP0564" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49076.1" FT /translation="MHGITIDSGRALDMLASMIEEAEQQYQAHMRETPHYEPASAGEGF FT VAYGESINSLFQLLHQRNAQRLELIKLGLEDARQRVHDLSNTDTEFAARLGAVE" FT CDS 534197..535513 FT /transl_table=11 FT /locus_tag="DIP0565" FT /product="Hypothetical protein" FT /note="No significant database matches. High concentration FT of alanine, glycine and proline residues" FT /protein_id="CAE49077.1" FT /translation="MTPDVAGYGRAVSDLRAASAGLYSGPAIAQEALAKAAGTTKGLRT FT DALRNTAQAMVGGSSTAFVTDKFWGSLIKILAQIATSFIASGLLSLAERWLGGSDDADN FT IQVQSHQASDAIDCVDQEATTNIATVISQLTTMIGQLVATLAGIDKKENPEAFAECVSA FT GAQAIDSAGKTIKQTCENRDKAIEQCFSTLTHRTEEKCSVQDPPPPPACTGGASGGAPV FT PAPATQPAGVVAPPPPPAAGGRSSAGGGAADILGAVSSLISGLCEDSTTTEATTEVATQ FT TTAETVEKTCEKANEKNTRVATTTSVTETCLEEQESEVVVVDCKTETKSCEQTCIASGV FT IGAVGLGIAVLGIGALIHCITESMGAFDCVPPPPTPDVPPPPAPAPPPVIDNVPEPPPP FT PKQIPGMVPAAAPAPPPAPEPPAPAPLSSHINVKKAGSW" FT misc_feature 534695..534718 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 534812..534913 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 534875..534913 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature 535004..535126 FT /note="ProfileScan hit to PS50325, Threonine-rich region." FT misc_feature 535199..535267 FT /note="1 probable transmembrane helix predicted for DIP0565 FT by TMHMM2.0" FT misc_feature 535307..535471 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature 535313..535363 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature 535382..535435 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature 535436..535510 FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT CDS 535507..535767 FT /transl_table=11 FT /locus_tag="DIP0566" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49078.1" FT /translation="MVMAYSSDKAQQQINSYAEFVESFRQTTAKRMAEFEQELADAQKK FT AHEAAKKKRELPARASVAAEIGASIRPRSTRGKVRGVLRKV" FT CDS complement(535786..536649) FT /transl_table=11 FT /locus_tag="DIP0567" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0370 TR:Q9CCV6 (EMBL:AL583918) (289 aa) fasta scores: FT E(): 6.4e-34, 42.46% id in 252 aa" FT /protein_id="CAE49079.1" FT /translation="MTIVAENLTKHLSNLSKRGPHRVLVGDLDYVGLPGKIYTPAEGNG FT LPAVVFAHDWMQDISRYHATLRHLASWGIVVAAPNTEKGISPNHRGFAADIETSLQVLT FT GVKLGAGNISVAPGRLGIVGHGMGAGAAVLAAADRPQIAAVAAIYPSQVSPSADVAARN FT VEAAGLVLGTEENAMFDFGNAAKLALEWKGPVAYREIDRASHQTLTENTLFKRVTGLGG FT TNTAARERIRGVVTGFLLHQLADQKKYSGFSEADATGKKVHSYWGEELQERASLTGDSK FT LTLFKS" FT misc_feature complement(536227..536511) FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT CDS 536812..537960 FT /transl_table=11 FT /locus_tag="DIP0568" FT /product="Putative alanine racemase" FT /note="Similar to Mycobacterium tuberculosis alanine FT racemase Alr or Rv3423c or MT3532 or MTCY78.06 SW:ALR_MYCTU FT (Q50705) (384 aa) fasta scores: E(): 4.1e-52, 44.59% id in FT 370 aa" FT /protein_id="CAE49080.1" FT /translation="MNLLETRISCDAIAANTRRLKDMVAPAQLMCVVKADGYNHGAPEV FT ATVMARNGADQFGVATLAEAHQLRDAGITLPILCWIWSPEQDFSAAIDRDIDLAAVSMD FT HVRALIAEAMRRPAGTRVRVTVKIDTELHRSGIDEANWTEAFELLHACPQVNVTGVFSH FT LACADDLESDYTDHQAEVFRRAISAGRNVGLDLPVNHLAASPATLTRPDLHFDMVRPGL FT ALYGHEPIAGLDHGLREAMTWIGSVTVVKPIAAGQGTSYNMTWHAPADGYLCVVPVGYA FT DGLPRNVQGHLEVTIAGTRYPQVGRVCMDQIVVFLGDNSRGVAPGDEAIIFGPRDTQAM FT TVTELACATGTINYEILCRPTGRSHRTYSALDAVAPTHPTES" FT misc_feature 536887..536937 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 536893..537918 FT /note="HMMPfam hit to PF00842, Alanine racemase" FT misc_feature 536995..537051 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 537043..537087 FT /note="ScanRegExp hit to PS00024, Hemopexin domain FT signature." FT misc_feature 537184..537222 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 537286..537321 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 537415..537498 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 537577..537624 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 537628..537675 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 537691..537744 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT misc_feature 537862..537903 FT /note="FPrintScan hit to PR00992, Alanine racemase FT signature" FT CDS 537967..538461 FT /transl_table=11 FT /locus_tag="DIP0569" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 18.2 kDa protein Rv3422c or MT3531 or MTCY78.07 FT SW:YY22_MYCTU (Q50706) (168 aa) fasta scores: E(): 4.4e-19, FT 46.71% id in 152 aa" FT /protein_id="CAE49081.1" FT /translation="MDTTFARSGNIRLETAAETQAFAEELGRHLEAGDVIILDGPLGAG FT KTTFTQGLARGLNVKGRVTSPTFVIAREHKSLSGGPSLVHVDAYRLIDDAAGATDPIGA FT LDSLDLETELEDAVVVAEWGGGLVEQITDSYLLITFDRTTAHIDDPDSEARIVTWKVIE FT P" FT misc_feature 538021..538428 FT /note="HMMPfam hit to PF02367, Uncharacterised P-loop FT hydrolase UPF0079" FT misc_feature 538084..538107 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 538648..540333 FT /transl_table=11 FT /locus_tag="DIP0570" FT /product="Putative membrane protein" FT /note="Similar to Escherichia coli O157:H7 putative FT transport protein ECS4625 TR:BAB38048 (EMBL:AP002566) (561 FT aa) fasta scores: E(): 3.1e-24, 29.47% id in 536 aa" FT /protein_id="CAE49082.1" FT /translation="MQIRVPQRNRGRTFPHRSSHRRTPIHILEFLAAQPLLTLALILAV FT GLLIGKIRFFGISLGAAAVLFVALALSTVDPALQLPPLVYQLGLAMFVYAIGLSAGSEF FT FAEFRHRGWKLTLFMIGLLMLMMAVAYGIIKLFGLDEIIGAGMFAGALSSTPGMAAMVE FT MLEGIDDSVASEPVVGYSLAYPGAVIGSILVAAIGAKLMKVNHAADAAEEGLVSDPLEW FT TGVRIGPGINGTIAQLPTLAGEEIIATRVVHSKTFHSLAAPNDRLHEGMVLVIHGTPDA FT LERAIAKVGKQQDVPIEDTDLVYSRFTVSSKAVVGRKISDLDTVRSGFIISRLRRGDAD FT VVPEPDDVLHYSDRVRVIAPANRMSEVRRFLGDSERSLADVDLMPFAFGLVIGLAIGVI FT PIPLPGGNTLSLGFGGGPIVAGLILGALNRTGPIHWQMPYHASRTISTFGLAIFLAGVG FT TSAGVGFRQALTDPASLTVIAGGFIVTISSALVCALVCMPLFKLKWDEAMGVAAGCTTN FT PAIISYLNGQTGTELATRGYATVYPTAMIGKIIASQMLLLALIA" FT misc_feature 538648..538815 FT /note="Signal peptide predicted for DIP0570 by SignalP 2.0 FT HMM (Signal peptide probability 0.892) with cleavage site FT probability 0.334 between residues 56 and 57" FT misc_feature order(538726..538794,538807..538860,538894..538962, FT 538990..539058,539071..539133,539176..539244, FT 539794..539862,539872..539931,539968..540036, FT 540079..540147) FT /note="10 probable transmembrane helices predicted for FT DIP0570 by TMHMM2.0" FT misc_feature 539512..539772 FT /note="HMMPfam hit to PF02080, Potassium channel" FT CDS 540480..540953 FT /transl_table=11 FT /locus_tag="DIP0571" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49083.1" FT /translation="MNKTAKGLLATLLIVFIAAVGAMIASAHAAVGTTNTEGKLETVLS FT RMSNNGLRITALSLADVYGSDWVAAAMICPGEDEKSIKDNYGVDPAQLHLKGTKVPDDV FT NYIVMANKEGGFTFEQFDRAEVDVCSTPVQGGFDTRQLVPFIKQENGGWAIAS" FT misc_feature 540480..540566 FT /note="Signal peptide predicted for DIP0571 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.965 between residues 29 and 30" FT CDS 541021..541689 FT /transl_table=11 FT /locus_tag="DIP0572" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 38.0 FT kDa protein ML0378 precursor or B229_C1_170 SW:YY21_MYCLE FT (Q49857) (359 aa) fasta scores: E(): 4.2e-30, 48.16% id in FT 218 aa" FT /protein_id="CAE49084.1" FT /translation="MLVLAIDTSTPDLIVGLVRKESTILSVLAQRIYEDSRQHNELLTP FT TVVELLAESGLEFSDIEAIVVGCGPGPFTGLRVGMVTAAAMGHALDVPVYGVSTHDAIA FT TQLTGSVLVATDARRKEVYWTAYRDGERVAGPDVISPKELSILSGTTVISVPKKLEASL FT PEAAVRIKTVDLRPLPECLVAVADFGVEPGPLEPLYLRRPDAKEPAAKPKSPAIPDVEL FT " FT misc_feature 541021..541332 FT /note="BlastProDom hit to PD002367, PD002367" FT CDS 541690..542181 FT /transl_table=11 FT /locus_tag="DIP0573" FT /product="Putative ribosomal-protein-alanine FT acetyltransferase" FT /note="Similar to Escherichia coli FT ribosomal-protein-alanine acetyltransferase RimI or B4373 FT or Z5974 or ECS5331 SW:RIMI_ECOLI (P09453) (148 aa) fasta FT scores: E(): 4.9e-09, 34.4% id in 125 aa" FT /protein_id="CAE49085.1" FT /translation="MAVELRLLRREDAARCAELEQLLFSEENPWSEADFVAEMAQPHTF FT YVGVDVDGEVVAYGGLAMLGPADDPEFEVHTVGVDPRWQRRGFGRLVMDNFVHVADTAG FT GPIFLEVRTTNAPAIALYESLGFEHQGVRKNYYQPSGADAFVMVRPAGCGVELSEGEDA FT " FT misc_feature 541828..542073 FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family" FT CDS 542182..543234 FT /transl_table=11 FT /locus_tag="DIP0574" FT /product="Putative endopeptidase" FT /note="Similar to Mycobacterium tuberculosis probable FT O-sialoglycoprotein endopeptidase Gcp or Rv3419c or MT3528 FT or MTCY78.10 SW:GCP_MYCTU (Q50709) (344 aa) fasta scores: FT E(): 2.8e-73, 64.91% id in 342 aa, and to Escherichia coli FT probable O-sialoglycoprotein endopeptidase Gcp or B3064 FT SW:GCP_ECOLI (P05852) (337 aa) fasta scores: E(): 2.3e-39, FT 42% id in 350 aa" FT /protein_id="CAE49086.1" FT /translation="MIVLGIESSCDETGVGIIDLADDGTMTIVGDAVASSMEQHARFGG FT VVPEIASRAHLESMIPVMKEALAQAGVERPDAVAATVGPGLAGALLVGASAAKAYAAAW FT GVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHTQILEVQAVGKPMRELGSTLDDA FT AGEAYDKVARLLGLGYPGGPVVDKLAARGNRKAIRFPRGLSRADDLRGEHRYDFSFSGV FT KTSVARYVESAEREGRVISVEDVCASFQEAVVDVLTSKAIMACKDTGASVLLLGGGVAA FT NSRLRELAAARCQSASIELRVPSFKLCTDNGVMIAAVASQLIHEGAQPSGLSVGTDTSL FT EVEIPLVHSL" FT misc_feature 542182..543153 FT /note="HMMPfam hit to PF00814, Glycoprotease family" FT misc_feature 542188..543129 FT /note="BlastProDom hit to PD002367, PD002367" FT misc_feature 542191..542232 FT /note="FPrintScan hit to PR00789, O-sialoglycoprotein FT endopeptidase (M22) metallo-protease family signature" FT misc_feature 542413..542475 FT /note="FPrintScan hit to PR00789, O-sialoglycoprotein FT endopeptidase (M22) metallo-protease family signature" FT misc_feature 542473..542535 FT /note="ScanRegExp hit to PS01016, Glycoprotease family FT signature." FT misc_feature 542476..542535 FT /note="FPrintScan hit to PR00789, O-sialoglycoprotein FT endopeptidase (M22) metallo-protease family signature" FT misc_feature 542575..542613 FT /note="FPrintScan hit to PR00789, O-sialoglycoprotein FT endopeptidase (M22) metallo-protease family signature" FT misc_feature 542647..542712 FT /note="FPrintScan hit to PR00789, O-sialoglycoprotein FT endopeptidase (M22) metallo-protease family signature" FT misc_feature 542998..543027 FT /note="FPrintScan hit to PR00789, O-sialoglycoprotein FT endopeptidase (M22) metallo-protease family signature" FT CDS 543376..543672 FT /transl_table=11 FT /gene="groES" FT /gene_synonym="mopB" FT /locus_tag="DIP0575" FT /product="10 kDa chaperonin" FT /note="Similar to Mycobacterium tuberculosis 10 kDa FT chaperonin MopB or GroES or Cpn10 or Rv3418c or MT3527 or FT MTCY78.11 SW:CH10_MYCTU (P09621) (99 aa) fasta scores: E(): FT 1.4e-26, 74.74% id in 99 aa" FT /protein_id="CAE49088.1" FT /translation="MANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVA FT AGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK" FT misc_feature 543385..543666 FT /note="HMMPfam hit to PF00166, Chaperonin 10 Kd subunit" FT misc_feature 543388..543663 FT /note="BlastProDom hit to PD000566, PD000566" FT misc_feature 543391..543438 FT /note="FPrintScan hit to PR00297, 10kDa chaperonin FT signature" FT misc_feature 543391..543465 FT /note="ScanRegExp hit to PS00681, Chaperonins cpn10 FT signature." FT misc_feature 543457..543522 FT /note="FPrintScan hit to PR00297, 10kDa chaperonin FT signature" FT misc_feature 543559..543597 FT /note="FPrintScan hit to PR00297, 10kDa chaperonin FT signature" FT misc_feature 543622..543663 FT /note="FPrintScan hit to PR00297, 10kDa chaperonin FT signature" FT CDS 543685..545304 FT /transl_table=11 FT /gene="groEL1" FT /gene_synonym="groEL-1" FT /gene_synonym="groL1" FT /locus_tag="DIP0576" FT /product="60 kDa chaperonin 1" FT /note="Similar to Mycobacterium tuberculosis 60 kDa FT chaperonin 1 GroL1 or GroEL1 or GroEL-1 or Rv3417c or FT MT3526 or MTCY78.12 SW:CH61_MYCTU (Q59573) (539 aa) fasta FT scores: E(): 6.2e-116, 63.51% id in 540 aa. Note: Also FT similar to DIP2020 (546 aa) E(): 6.1e-98; 57.116% identity FT in 534 aa overlap" FT /protein_id="CAE49090.1" FT /translation="MAKLIAFNQEAREGILKGVDALANAVKVTLGPRGRNVVLQKAFGS FT PTVTNDGVTIAREIDLSDPFENLGAQLVKSVAVKTNDIAGDGTTTATLLAQAVVTEGLR FT NVAAGANPIELNRGIAAGSEFVVGKLRERATDVSSAADIANVATVSSRDPEVGDMVAAA FT MEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGFLSPYFITDTDTQHAVLEQPAILLVR FT NKISSLPDFLPVLEKALEASKPILIIAEDVEGEPLQTLVVNSIRKTLRAVAVKAPYFGE FT RRKAFMDDLAVVTGATVIDPEVGVNLNEAGAEVFGTARRVTVTKDETIIVDGAGTAEAV FT ENRRAQIRREIENTDSAWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAIN FT AARAAAQEGVIAGGGSALVQISKELREFAQEFEGDAKIGVIALANALAKPTYWIADNAG FT LDGAVVVSKVSELPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTE FT ASVVEKPAAPAPEAGHHHHHHH" FT misc_feature 543748..545256 FT /note="HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin FT family" FT misc_feature 543754..543804 FT /note="FPrintScan hit to PR00304, Tailless complex FT polypeptide 1 (chaperone) signature" FT misc_feature 543760..543840 FT /note="FPrintScan hit to PR00298, 60kDa chaperonin FT signature" FT misc_feature 543820..543876 FT /note="FPrintScan hit to PR00304, Tailless complex FT polypeptide 1 (chaperone) signature" FT misc_feature 543922..543981 FT /note="FPrintScan hit to PR00304, Tailless complex FT polypeptide 1 (chaperone) signature" FT misc_feature 543928..544011 FT /note="FPrintScan hit to PR00298, 60kDa chaperonin FT signature" FT misc_feature 544480..544551 FT /note="FPrintScan hit to PR00298, 60kDa chaperonin FT signature" FT misc_feature 544726..544803 FT /note="FPrintScan hit to PR00298, 60kDa chaperonin FT signature" FT misc_feature 544810..544878 FT /note="FPrintScan hit to PR00304, Tailless complex FT polypeptide 1 (chaperone) signature" FT misc_feature 544870..544935 FT /note="FPrintScan hit to PR00298, 60kDa chaperonin FT signature" FT misc_feature 544891..544926 FT /note="ScanRegExp hit to PS00296, Chaperonins cpn60 FT signature." FT misc_feature 544909..544947 FT /note="FPrintScan hit to PR00304, Tailless complex FT polypeptide 1 (chaperone) signature" FT misc_feature 545281..545301 FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT CDS 545504..546070 FT /transl_table=11 FT /locus_tag="DIP0577" FT /product="Putative RNA-polymerase sigma factor" FT /note="Similar to Mycobacterium tuberculosis probable RNA FT polymerase sigma-D factor SigD or Rv3414c or MT3523 or FT MTCY78.15 SW:RPSD_MYCTU (Q50712) (212 aa) fasta scores: FT E(): 7e-28, 48.58% id in 177 aa, and to Streptomyces FT coelicolor RNA polymerase sigma-E factor SigE or SCE94.07 FT SW:RPOE_STRCO (P38133) (176 aa) fasta scores: E(): 0.0002, FT 28.38% id in 155 aa" FT /protein_id="CAE49091.1" FT /translation="MNEEVRELERLVPAAATGDKTALQRIISIVYPQVLRYARTRLSGG FT RHPTPEDVAQEICLAVATSIAKFVDQGKPFMAFVYGIASNKVADAHRLYSRDLSNPTDE FT VPETEIDNDTPESFALLAAGSNRVQQLLDLLGDKPREILTLRVFVGLSAEETAEIVGST FT PGAVRVAQHRALATLRKAIEQETGE" FT misc_feature 545954..546019 FT /note="Predicted helix-turn-helix motif with score 1323 FT (+3.69 SD) at aa 151-172, sequence LSAEETAEIVGSTPGAVRVAQH" FT CDS 546067..546969 FT /transl_table=11 FT /locus_tag="DIP0578" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49093.1" FT /translation="MTKHRWDGADGRASQPIDELWNDDAFLTQLSRGIDPSHGEDHLAQ FT LFLAERERINSEIPAAPTLASLGLATGVTSISNKYDDAPTNTFPVVDDNVVADEPEEAT FT VIALPRRRWGNSFAHGLVGAAAATLLIAGSGALIYNADEGSSLYPISQKMFGNSATSKA FT TVVELASKLEQAQQLTDRGDGHGARLALDQAHDLLQKLAEPEQSQAAKKLKDAEASLAP FT SPQAPVAPEPSAPPSPTVTQTVTSTVTTTVAPPSETPSTGASKSSTEPTPSPTTETPVY FT PAPLAPLFGGDLDSLEPLQ" FT misc_feature 546415..546483 FT /note="1 probable transmembrane helix predicted for DIP0578 FT by TMHMM2.0" FT misc_feature 546781..546900 FT /note="ProfileScan hit to PS50325, Threonine-rich region." FT stem_loop 546972..547021 FT /note="Score 53: 19/20 (95%) matches, 0 gaps" FT CDS complement(547039..547425) FT /transl_table=11 FT /locus_tag="DIP0579" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 15.3 kDa protein Rv3412 or MT3521 or MTCY78.16C FT SW:YY12_MYCTU (Q50714) (136 aa) fasta scores: E(): 7.8e-18, FT 43.36% id in 113 aa" FT /protein_id="CAE49094.1" FT /translation="MNFDWQMPRDPFADDPNDPASFIEDDEQAPPLTEAERQHIREDLA FT LVKRFKEALEPRGINGIFFLCEDCDEDHYYDWDIMAANMRATLAGELAPVHEPSVNPNP FT HAYVPWDYCLGYLDGLEAPRMRFF" FT CDS 547582..549102 FT /transl_table=11 FT /gene="guaB" FT /gene_synonym="guaR" FT /locus_tag="DIP0580" FT /product="inosine-5'-monophosphate dehydrogenase" FT /EC_number="1.1.1.205" FT /note="Similar to Escherichia coli inosine-5'-monophosphate FT dehydrogenase GuaB or GuaR or B2508 or Z3772 or ECS3370 FT SW:IMDH_ECOLI (P06981) (488 aa) fasta scores: E(): 3.3e-69, FT 53.55% id in 493 aa, and to Corynebacterium ammoniagenes FT IMP dehydrogenase GuaB TR:Q9RHZ0 (EMBL:AB003154) (506 aa) FT fasta scores: E(): 2.7e-142, 80.98% id in 505 aa" FT /protein_id="CAE49095.1" FT /translation="MTQQRVSTGGDDPNKVALVGLTFDDVLLLPDASEVIPSEVSTSTQ FT LTRNISLNIPVVSAAMDTVTESRMAIAMAREGGMGILHRNLSIEEQAAHVETVKRSESG FT MVTDPVTCSPDMSISEVDALCARFRISGIPVVDSEGKLLGICTNRDMRFEQNFDRKVSE FT VMTPMPLVVAEEGVTKEQALSLLSTNKVEKLPIVDKQGKLVGLITVKDFVKTEQYPNAS FT KDATGRLLVGAGIGVGEESWTRAGSLVDAGVDVLVVDSAHAHSKGVLDMVSRVKQEWGD FT RVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPA FT HAAGVPIIADGGMQFSGDIAKALAAGASTVMLGSMLAGTAEAPGDIVVVGGKQYKRYRG FT MGSMGAMQGRGLSGEKRSYSKDRYFQADVRSEDKLVPEGIEGRVPFRGSIDAITHQLVG FT GLRAAMGYTGSATINDLWNARFVQITSAGLKESHPHHIQQTVEAPNYH" FT misc_feature 547621..547884 FT /note="HMMPfam hit to PF01574, IMP dehydrogenase / GMP FT reductase N terminus" FT misc_feature 547888..548049 FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature 547903..548046 FT /note="ProfileScan hit to PS50147, SNF4 repeat." FT misc_feature 547903..548049 FT /note="HMMSmart hit to SM00116, Domain in cystathionine FT beta-synthase and other proteins." FT misc_feature 548071..548232 FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature 548086..548229 FT /note="ProfileScan hit to PS50147, SNF4 repeat." FT misc_feature 548086..548232 FT /note="HMMSmart hit to SM00116, Domain in cystathionine FT beta-synthase and other proteins." FT misc_feature 548320..549018 FT /note="HMMPfam hit to PF00478, IMP dehydrogenase / GMP FT reductase C terminus" FT misc_feature 548500..548538 FT /note="ScanRegExp hit to PS00487, IMP dehydrogenase / GMP FT reductase signature." FT misc_feature 548608..548715 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 549130..550275 FT /transl_table=11 FT /locus_tag="DIP0581" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium ammoniagenes GuaB, ORF FT genes for IMP dehydrogenase, hypothetical protein TR:Q9RHY9 FT (EMBL:AB003154) (376 aa) fasta scores: E(): 3.5e-63, 67.18% FT id in 387 aa, and C-terminal region similar to Escherichia FT coli inosine-5'-monophosphate dehydrogenase GuaB or GuaR or FT B2508 or Z3772 or ECS3370 SW:IMDH_ECOLI (P06981) (488 aa) FT fasta scores: E(): 0.00061, 31.49% id in 181 aa" FT /protein_id="CAE49098.1" FT /translation="MRDYVEIGMGREARRTYHLDSVAIVPSRRTRSSKDVDTTWHIDAY FT TFDIPFMSHPTDALATPDFVIEMDKQGGLGVINAEGLWGRHADLDAAIQEVITAYGDDE FT LDLGSCNRATKKLQELHAAALDTELLVERIAQVRSSGATVAVRVSPQHCHELAPILIKA FT GAELLIVQGTIISAEHVETNGEPLNLKEFIGSIDVPVIAGGVNDYTTALHLMRAGAVGI FT IAGGGQNTNDCALGIDDSLATIIADVAAARRDYLDETGGRYVHVIADGQIFTSGDAVKA FT IACGADAVILGEPLARAAEAGGKGLYWPSAAAHPRFPRGVVGTAGVMPKTEQVSLEVLL FT HGPSTNVFGEENFVGGLKRAMAKCGYTDLKSFQKVDLTVQF" FT misc_feature 549604..550257 FT /note="HMMPfam hit to PF00478, IMP dehydrogenase / GMP FT reductase C terminus" FT misc_feature 549913..550020 FT /note="ProfileScan hit to PS50264, Proteins binding FMN and FT related compounds (core region profile)." FT CDS 550408..551304 FT /transl_table=11 FT /locus_tag="DIP0582" FT /product="Putative iron transport system binding (secreted) FT protein" FT /note="Similar to Escherichia coli iron FecB or B4290 FT SW:FECB_ECOLI (P15028) (300 aa) fasta scores: E(): 1.6e-12, FT 28.57% id in 287 aa" FT /protein_id="CAE49099.1" FT /translation="MHVNPLISVARSKASALFAALALVLVVTLTLAGCSSDKSGETTAE FT AKKDPSSIRVVALDWRYEEILHALGITPVGIVEIGKSKEPQTLKGELEGVTSVGQAKQP FT NLEVIQSLEPDLILASPTRQAAIMDQLKEIAPTHAYGDTSYTEVLDAMDDIATKVGAED FT KAKEVRTRIESKIAQAKNKVEPGTRTALIGWSKNTLYTWVKDSFAGSLLTAAGYEYGYD FT GEKSAIESKTDVAELTGDKLPEMKLDVMYLYNDIEGFRSSPYADVVSNIVDVEQDTWSR FT SRGPLAAEAMLDQIINS" FT misc_feature 550408..550512 FT /note="Signal peptide predicted for DIP0582 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.560 between residues 35 and 36" FT misc_feature 550408..562346 FT /note="Putative iron uptake system" FT misc_feature 550450..550509 FT /note="1 probable transmembrane helix predicted for DIP0582 FT by TMHMM2.0" FT misc_feature 550555..551241 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT misc_feature 550630..550653 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 551335..552324 FT /transl_table=11 FT /locus_tag="DIP0583" FT /product="Putative iron transport system membrane protein" FT /note="Similar to Escherichia coli iron FecC or B4289 FT SW:FECC_ECOLI (P15030) (332 aa) fasta scores: E(): 1.6e-22, FT 33.77% id in 305 aa" FT /protein_id="CAE49100.1" FT /translation="MKSRAVLASLFACGIVVVAIVWWRISGVSAPADAPQLFPELLSLA FT RDRLLAALIVGACLGVGGVLLRTATSNPLADPHITGVNAGAAFGAVASSFITGSATGAY FT LLPGALIGGALAAGFTISLSVRGAGPELSGAHAVQKMVLLGIAVSAVFSALTAIFLVLD FT EAQLTTILAWLNGRLAGVRMGDLWPALCAFVMLFPVLVAGGRAFDSLGTGDVVSRAIGA FT HPARVRALAIVASVVLTATCVAAAGPIGFLGLLAAVVAQRIAGRAHRRSLVVAAAVGAT FT TLLVADTVGQALWAPVETPVGILTGIAGVPLLLWGIRSLGSGTKRQGK" FT misc_feature 551335..551424 FT /note="Signal peptide predicted for DIP0583 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.522 between residues 30 and 31" FT misc_feature order(551347..551415,551479..551532,551641..551709, FT 551752..551820,551881..551949,552043..552111, FT 552148..552216,552229..552297) FT /note="8 probable transmembrane helices predicted for FT DIP0583 by TMHMM2.0" FT misc_feature 551374..552291 FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature 551971..552279 FT /note="BlastProDom hit to PD001557, PD001557" FT CDS 552324..553307 FT /transl_table=11 FT /locus_tag="DIP0584" FT /product="Putative iron transport system membrane protein" FT /note="Similar to Escherichia coli iron FecD or B4288 FT SW:FECD_ECOLI (P15029) (318 aa) fasta scores: E(): 2.6e-28, FT 35.01% id in 317 aa" FT /protein_id="CAE49102.1" FT /translation="MAQKKTFVIALVVSTACLVLACLLGMAIGAVQKSLPEVVAGLISG FT ESLYWRYRMPRIVVGVLAGVGMAVSGSLLQTSLRNPLAAPDTLGITAGGGLAAVVALLG FT FGQLSPLALTPIAFVGSLLGAVVVLLAAGKSIFDPARLALTGVAVSVGLAAVTQLLLVR FT VAPEAGAAMTWLKGSLYARTMADAMTVAPVVVIGCVVALIGAKHFNALALDDAMMTSIG FT VRSRALRLVTLGVAIACGSAAVAAAGVLGFVGLIIPHAAKLLVGQALSRQIPVAAVAGA FT ALVVATDAVGRWVFAPTEIPVGALIAIVGAPYFIYLVHRVTSVKRK" FT misc_feature 552324..552410 FT /note="Signal peptide predicted for DIP0584 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.391 between residues 29 and 30" FT misc_feature order(552342..552410,552492..552545,552582..552641, FT 552654..552722,552741..552809,552885..552953, FT 553014..553082,553140..553208,553227..553295) FT /note="9 probable transmembrane helices predicted for FT DIP0584 by TMHMM2.0" FT misc_feature 552408..553283 FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature 552960..553283 FT /note="BlastProDom hit to PD001557, PD001557" FT CDS 553311..554123 FT /transl_table=11 FT /locus_tag="DIP0585" FT /product="Putative iron transport system ATP-binding FT protein" FT /note="Similar to Bacillus subtilis ferrichrome transport FT ATP-binding protein FhuC SW:FHUC_BACSU (P49938) (269 aa) FT fasta scores: E(): 1.2e-37, 45.13% id in 257 aa, and to FT Escherichia coli iron FecE or B4287 SW:FECE_ECOLI (P15031) FT (255 aa) fasta scores: E(): 5e-32, 42.8% id in 250 aa" FT /protein_id="CAE49103.1" FT /translation="MDRNSTATMPQQSLGCMSMSAGYGAELIVRDVSLDVPAGKITALI FT GPNGSGKSTLLKVLGRQLRAESGQVTLDGRDIADFGAREFARNLAFLPQQPVVPDGMTV FT RELISFGRYPYSGAFASLSAADHAAIERAAAATSITEFLDADAMALSGGQKQRMWIAVT FT LAQETGILLLDEPTTFLDPAHQLAILDLVHELNQQGRTIVMVLHDMAHAAKYSDHVVVM FT KNGEVLQQGPTQSTLNSGLIEQAFGISTMMVTDPETNRQLPIAYGIKR" FT misc_feature 553407..553553 FT /note="HMMPfam hit to PF00013, KH domain" FT misc_feature 553422..553988 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 553425..553985 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 553431..553508 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 553446..553469 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 553758..553802 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 553758..553973 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 554145..557468 FT /transl_table=11 FT /locus_tag="DIP0586" FT /product="Putative siderophore biosynthesis related FT protein" FT /note="Similar in its N-terminal region and C-terminal FT region to Rhizobium sp hypothetical 71.0 kDa protein Y4xN FT SW:Y4XN_RHISN (P55706) blast scores: E(): 3e-23, score: 277 FT 22% id and also to Rhizobium meliloti rhizobactin FT siderophore biosynthesis protein RhbC or RhsC or RA1260 or FT SMA2404 SWALL:AAK65918 (EMBL:AF110737) (585 aa) fasta FT scores: E(): 6e-12, 26.23% id in 526 aa. Possible FT duplication" FT /protein_id="CAE49104.1" FT /translation="MLENGYISQSNCESDIRGRLLAALIDEHLITPETHHKLTNTTTPP FT ADLLRQLAQDNQLTITPTNLERACAEIADSVVGLHRARTAITQRWEQALNAQTATNTSQ FT TPYSDLIQALRQRCRLEDRGSSAMLARCEQLVCDGHPAHPAAKTSLGIGDSFLHVLPEQ FT TETIQLRFVAVDTDHAVVVGGHPVETISEAMPLLGARLNAELERCELHHHSVIPVHPFQ FT WDNVISSEFAEEIASGTIVLLETTATAEPLMSVRTLRVSDATGSMHIKVALEIQLTGAV FT RGVSAGAVAAPAIASIIDDACTLDAGFIPRTDTDQPAFSVAYDRSAIRWNADSGIRAHC FT FGAVLRDDPTGNADDEIAMPVATLLARNPLTGATIAADLIDELSHRHNRHRDEIATDWF FT TALGKFLFVPAVALIARWGIALEPHPQNTVIILRDGMPHRIVVRDLGGCRLWANGPLAA FT HPIVDKLRATALIENDLIRLIDKVFYPLVANLHRNLITAAAITKPAQQRINLALSTHIA FT REYWRTTASHLHPANTVATVFQRILGPVLPVKRVLGMRLSGAVTEQEYVADISPLENLE FT LLTPESLRAACAPYSEWAHETLATRLHDAAVRERIDDSFPTLRDDIANAEENLALVRAQ FT VTSRVNTPESYWDLLKGLPPHAAMIAADSYAISGHNVHPLAKLRRGFSIEESAAYGPEA FT GMSTDLRLVGVDKRMIDTSTTADCVRLIAHHFPQHIAYARTHLHEHGLDADSYAIIPVH FT PWQLEHVIREAFAEDIADHTMVPIPNIAIAAHPTISLRTLVPHAPTPSGTRPFIKCAVD FT VTLTSTRRSISQDSALGTPRVAGLVATALEQLRRETNVQPRAVVVPELSGLALSRDERS FT EGIDDSFRKTRQRGLSVLLRDDATAYLAPGEIAMSACALRGHEGVVPSPLRDINEEFFD FT DYVYDLMSTVLGLMMVKGIALEQHLQNTLVRIDLSGKTPVYRGIMLRDFSGLRAWAPRL FT QQWASDQVFEPGAITLTDDHEEFVNKGFYASVFGNLDGIVDEYSQARGVDAQSLWERVH FT VQINRFVQEAAGMLPAVDMEWMRRETIRRKGFVSMSLQGSSADIYVEERNPLAANPAWA FT " FT CDS 557508..558737 FT /transl_table=11 FT /locus_tag="DIP0587" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT transport protein SC5F8.19 TR:Q9K4K5 (EMBL:AL357613) (444 FT aa) fasta scores: E(): 7.2e-10, 27.72% id in 404 aa" FT /protein_id="CAE49105.1" FT /translation="MRSAIRLMVGQALVSRVSAAAELVALNWWVFHATGSSAMVGAVTL FT ARLVPLAVAGPWLGARADRVEPTRLLAAVLSVGAVMTVLMACVMYVQGEGASIRGVWMV FT VVAVAVRAVVTSAEPAIRNATVAAMSGSGELMSAMASLSLVITLSLVVGPALAGVLMAA FT GGSALVVALCGAGYAVAAVSSLALPRVSTPPAAAPSSSAATPWRTAIRVVGDHPRLGAQ FT LVIAAGPMLCVFPYTAMMPVIAHTLFADDAQRGIAILSAAGGVGAVIGAVLMKKVLATP FT PAVLAVGAAIALTLPTVFLAVIAALPKMIILGAVCVCLLGFVGQLYRTSNRTATLLLAP FT DEHKGLFAGISQTDRVLIPAGAFLLGFVADHWGVVVMAAVMAVGNAVLILPALFLIARN FT KNVASSDVLD" FT misc_feature 557508..557564 FT /note="Signal peptide predicted for DIP0587 by SignalP 2.0 FT HMM (Signal peptide probability 0.631) with cleavage site FT probability 0.418 between residues 19 and 20" FT misc_feature order(557541..557600,557613..557681,557715..557783, FT 557919..557987,558000..558068,558183..558251, FT 558270..558329,558357..558416,558435..558488, FT 558627..558695) FT /note="10 probable transmembrane helices predicted for FT DIP0587 by TMHMM2.0" FT misc_feature 558348..558422 FT /note="ScanRegExp hit to PS00043, Bacterial regulatory FT proteins, gntR family signature." FT CDS 558764..559198 FT /transl_table=11 FT /locus_tag="DIP0588" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49106.1" FT /translation="MIVVLALPGYLWAMVRVPQNARRQLASDMAWGIVVGLVNWILTMS FT WGDSSQYSPIQVAISGALMVAWVVWCTWRWASILMRGVPATWGAIAGYAGGWSGMAMPS FT DVTGLWAVGLVFLILGMTAGLSLVVLIVAVLKLLVARARQ" FT misc_feature order(558851..558904,558917..558976,558995..559063, FT 559091..559159) FT /note="4 probable transmembrane helices predicted for FT DIP0588 by TMHMM2.0" FT CDS complement(559337..560233) FT /transl_table=11 FT /locus_tag="DIP0589" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCD10.06 TR:Q9K3X0 (EMBL:AL359988) (295 FT aa) fasta scores: E(): 6.6e-36, 43.82% id in 267 aa" FT /protein_id="CAE49107.1" FT /translation="MLQRTATTTGVLFIIASCCSLQMGAAFAIQLFPIAGPWATTFARL FT FISGAILLAITRPSIRDFDRSQWSAIIVFGLTIGAMNTTFYAALSRIPLGTAVTIEFIG FT PLTLSAVLSKSARDLLWVLIAIAGISLFGWESLFGTGNLDPIGVAFVLIAGFFWAMYIL FT ASAKVGRLIPGSGGLALGMLIGSLIPLPLGAVNLPLFFTSSHLIALAIGTAILASLIPY FT SFEMAALRRLPSAIFGILCSLEPVFAAFFGWLLLHQPISTISVIAMALVITASAGTTIN FT ANRKNTPKVSVTLNETT" FT misc_feature complement(order(559388..559453,559466..559531, FT 559571..559636,559652..559717,559739..559795, FT 559811..559876,559898..559951,559964..560029, FT 560066..560131,560147..560212)) FT /note="10 probable transmembrane helices predicted for FT DIP0589 by TMHMM2.0" FT misc_feature complement(559394..559768) FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6" FT misc_feature complement(560150..560233) FT /note="Signal peptide predicted for DIP0589 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.973 between residues 28 and 29" FT CDS join(560297..560683,560741..560950) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0590" FT /product="Conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to central parts of Deinococcus FT radiodurans hypothetical 77.5 kDa protein DR2265 TR:Q9RS62 FT (EMBL:AE002059) (725 aa) fasta scores: E(): 9.6e-10, 34.54% FT id in 165 aa. Presents an internal stop codon" FT misc_feature 560486..560554 FT /note="1 probable transmembrane helix predicted for DIP0590 FT by TMHMM2.0" FT misc_feature 560858..560926 FT /note="1 probable transmembrane helix predicted for DIP0591 FT by TMHMM2.0" FT CDS 560966..561250 FT /transl_table=11 FT /locus_tag="DIP0592" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49109.1" FT /translation="MMSIFSVQTGSLVGTVHRYVKQPRQSWAYPIKQKSQTGTDNTKSA FT LTLEKFTKPLTRKFSHDTICRKAPFVGVELQKPSATLTIMGKVHRQRQE" FT CDS 561256..561825 FT /transl_table=11 FT /locus_tag="DIP0593" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49110.1" FT /translation="MSFGMRTASIAFSLALALPMSMMSAPKAQAFPDFPISLEQETSYA FT VTNSNDCSELHNDEPVAVPYAAVAAVEELIDNGIIDPSVVFALNNTDPNVTVVGPQPRA FT LPAVAALALAGVAWCAKGALSSLVPSALQAMVPQANSNVPLSDRVLNALFGCAEGPVLG FT AVSSQVMRLKFAGAVLAAVIKLRNFG" FT misc_feature 561256..561345 FT /note="Signal peptide predicted for DIP0593 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.797 between residues 30 and 31" FT CDS 562125..562346 FT /transl_table=11 FT /locus_tag="DIP0594" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49111.1" FT /translation="MRNNRNNTQLGRPISPLRTQRHTPATMAATAALSTSPRSQNNLPD FT TTPLVFLEVGIRDASEFYSPITITGHVG" FT misc_feature 562125..562247 FT /note="Signal peptide predicted for DIP0594 by SignalP 2.0 FT HMM (Signal peptide probability 0.935) with cleavage site FT probability 0.302 between residues 41 and 42" FT CDS 562428..564005 FT /transl_table=11 FT /gene="guaA" FT /locus_tag="DIP0595" FT /product="GMP synthase [glutamine-hydrolysing]" FT /EC_number="6.3.5.2" FT /note="Similar to Corynebacterium ammoniagenes GMP synthase FT [glutamine-hydrolysing] GuaA SW:GUAA_CORAM (O52831) (524 FT aa) fasta scores: E(): 5.7e-173, 86.2% id in 522 aa, and to FT Escherichia coli GMP synthase [glutamine-hydrolysing] GuaA FT or B2507 SW:GUAA_ECOLI (P04079) (525 aa) fasta scores: E(): FT 1e-85, 47.92% id in 530 aa" FT /protein_id="CAE49112.1" FT /translation="MTQQTSQKHNPVLVVDFGAQYAQLIARRVREANIYSEVVPHTATV FT EEIKAKNPAALILSGGPSSVYADGAPSLDPQVLELGIPVFGICYGFQAMTHALGGTVAN FT TGNREYGRTEMTVDGGILHADLEETHKVWMSHGDAVSVAPEGFVVTAHSEGAPVAAFEC FT AEKRMAGVQYHPEVLHSPHGQEVMVRFLTEIAGLEQNWTAANIAEELIDAVCAQVGPEG FT RAICGLSGGVDSAVAAALVQRAIGDRLTCVFVDHGLLRAGEREQVQTDFVAATGAKLVT FT VDEREAFLNKLAGVTEPEAKRKAIGAEFIRSFERAVAGILDDAPEGSTVDFLVQGTLYP FT DVVESGGGSGTANIKSHHNVGGLPDDVEFQLVEPLRLLFKDEVRAVGRELGLPEEIVNR FT QPFPGPGLGIRIIGEVTEERLETLRAADLIARTELTAAGLDSEIWQCPVVLLADVRSVG FT VQGDGRTYGHPIVLRPVSSEDAMTADWTRLPYDVLEKISTRITNEVSDVNRVVLDCTSK FT PPGTIEWE" FT misc_feature 562461..562505 FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature 562464..563009 FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I" FT misc_feature 562584..562628 FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature 562593..562622 FT /note="FPrintScan hit to PR00096, Glutamine FT amidotransferase superfamily signature" FT /note="FPrintScan hit to PR00097, Anthranilate synthase FT component II signature" FT misc_feature 562674..562709 FT /note="FPrintScan hit to PR00096, Glutamine FT amidotransferase superfamily signature" FT /note="FPrintScan hit to PR00097, Anthranilate synthase FT component II signature" FT /note="ScanRegExp hit to PS00442, Glutamine FT amidotransferases class-I active site." FT misc_feature 562674..562724 FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature 562935..562976 FT /note="FPrintScan hit to PR00096, Glutamine FT amidotransferase superfamily signature" FT /note="FPrintScan hit to PR00097, Anthranilate synthase FT component II signature" FT misc_feature 563637..563999 FT /note="HMMPfam hit to PF00958, GMP synthase C terminal FT domain" FT CDS complement(564081..564779) FT /transl_table=11 FT /locus_tag="DIP0596" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49113.1" FT /translation="MYRLTPPLPPTLIRVTSPDPTTIPTILRLVENIWQGQPNLSLVAI FT LDILCNHGLDWDSTPSDTIAVLRAYLDDFPTTLSEDTLASGRTFRIRTTSPTSEFIICG FT HRIAALGNAPTTWEFEHLTRAEIHQPLRIDAHRYGVITHIDNLGDLTPATATSLLVTLA FT PFLHDAPTLVLSNASTRKVIAYTTKNRRKESSILSGNLIKYAIGGRCVVASPSGEVVDL FT GEVVSVMAVG" FT CDS 564837..565313 FT /transl_table=11 FT /locus_tag="DIP0597" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49114.1" FT /translation="MMHGGFAMIIDQYWGKYFGDSADSQRLAQYLAGKNREVLTTSEIF FT QDFQLAQLSGNYTQASLDGAGWHFDSAFQFVIDLAVLVLESKKVGRFSIARIGGPEDRF FT MRIDAATDELLPITMALKHYALAPEDYLFSHGIDVDDWYELGNLCEEIRAQLEA" FT CDS complement(565332..566465) FT /transl_table=11 FT /locus_tag="DIP0598" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49115.1" FT /translation="MVGTMGVMETTWKNMWDTRPVRLPSDQGGNAKIAGVCEGIGVRYQ FT IDPTLIRILFVLLLFSGWGLALYLVAWLTMPKYSMRYSPWELVVQNTSSAGTVGATGQP FT MSDAEKQQKQTGWVLIAFLLFIAFTTAWGDVFRFSSIAAIAMFGASWYLLHRRTPIPPV FT GLLFPTDREPGPHAEGFSTAADSSVPTVDLSGYSPVQGHATPVSGEQPPAWDPLGAAPF FT AWDLPDPTEQPQPKRKRRTPWVIGLVALLSAAAIGCASIVFAFVGIAPWVTSESVGSVE FT MRPATSTELADEYTTDVGDILLDLRDLHKLDRDREVVVQSTIGDIDVRLPDDIRTTVTC FT KNKVGSSSCPPDTVNSKADGSTLRLVVINDIGDISVS" FT misc_feature complement(order(565668..565733,566058..566123, FT 566241..566306)) FT /note="3 probable transmembrane helices predicted for FT DIP0598 by TMHMM2.0" FT CDS 566547..567758 FT /transl_table=11 FT /locus_tag="DIP0599" FT /product="Putative two component system sensor kinase" FT /note="Similar to Streptomyces coelicolor putative FT two-component system sensor kinase SCD63A.02 TR:Q9KY73 FT (EMBL:AL356832) (430 aa) fasta scores: E(): 3e-12, 37.09% FT id in 434 aa" FT /protein_id="CAE49116.1" FT /translation="MPVATAHATIIHMQPAFPRYYRDRSHGIVAGVAAGLASYLGVKVV FT TVRWVLALLSFVNGIGILFYVAVWLFIPTRPESEDNAGTTHNADTTIYTDQSSSATLTN FT WLLVFAAFAGAVLTGRIANSFLGISTPLLLSLTICAIGIVLSWIAYDRFNSKYSIVIIA FT VGTVFVFTGIVLATVEWGGDSGFGVALLAVALTLLGVSALAVPFGLQMWRRYTEESRQR FT AAADERAEIAARIHDSVLQTLALIQKRSTEAGVQKLARFQERELRQWLFAPRDNVSFFA FT AIERACGEVEDMFGVTVHPVTVGEDRIIDHNTQAAVFAAREAMVNAAKHAGVPSIDVYA FT ECFDNVEIYVRDRGPGFDLDAIAEDRHGVRDSIIARVQRCGGEAQITSNNGTEVVIRMP FT FDGQ" FT misc_feature order(566625..566684,566694..566762,566847..566915, FT 566928..566996,567015..567074,567102..567170) FT /note="6 probable transmembrane helices predicted for FT DIP0599 by TMHMM2.0" FT misc_feature 567507..567665 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT CDS 567764..568459 FT /transl_table=11 FT /locus_tag="DIP0600" FT /product="Putative two component system response regulator" FT /note="Similar to Streptomyces coelicolor putative FT two-component system DNA-binding response regulator FT SSCD63A.03 TR:Q9KY72 (EMBL:AL356832) (251 aa) fasta scores: FT E(): 3.8e-26, 58.72% id in 235 aa, and to Bacillus brevis FT transcriptional regulatory protein DegU SW:DEGU_BACBR FT (P54662) (236 aa) fasta scores: E(): 2.7e-10, 30.97% id in FT 226 aa" FT /protein_id="CAE49117.1" FT /translation="MKVFLVDDHSVFRAGVKAEISDAVDIVGEAGTVADAIAGINATDP FT DVVLLDVHMPDGGGVAVVRSILSQQGIGRNRRFLALSVSDAAEDVISVIRAGARGYVTK FT TISGAELVDAIRRVHDGDAVFSPRLAGFVLDAFARPDPVGAGVVNAPESDRAVEEGKPV FT ADPIVDALTRRELEVLKLLARGYTYKEIAAELFISVKTVETHASNILRKTQQSNRHALS FT RWAQSHDLD" FT misc_feature 567764..568108 FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT misc_feature 567764..568132 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature 567767..568120 FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature 568265..568438 FT /note="HMMSmart hit to SM00421, helix_turn_helix, Lux FT Regulon" FT misc_feature 568265..568456 FT /note="HMMPfam hit to PF00196, Bacterial regulatory FT proteins, luxR family" FT misc_feature 568274..568318 FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature 568274..568426 FT /note="ProfileScan hit to PS50043, Helix-turn-helix domain, FT luxR and related types (substantial overlap with lysR FT type)." FT misc_feature 568316..568366 FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT misc_feature 568316..568399 FT /note="ScanRegExp hit to PS00622, Bacterial regulatory FT proteins, luxR family signature." FT misc_feature 568364..568402 FT /note="FPrintScan hit to PR00038, LuxR bacterial regulatory FT protein HTH signature" FT CDS 568608..568958 FT /transl_table=11 FT /locus_tag="DIP0601" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49118.1" FT /translation="MKSKLFPLLVPVLSASVVLTSCGQSDEPQQSAADNGVTVTNCGKG FT VTYAQADNLFVNDANIISMVLSVGAAADVVEGSPSFEAVVAKPPDIFIGGWNSGMSEEK FT SLTPDSLKGAGD" FT misc_feature 568608..568706 FT /note="Signal peptide predicted for DIP0601 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.817 between residues 33 and 34" FT CDS complement(569168..569617) FT /transl_table=11 FT /locus_tag="DIP0602" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49119.1" FT /translation="MPIMNGLSSSISATALPTPIPTPPTVRFISSALIAVAVAVLTTSL FT AREIQVIMLLISAGAAFLILFSHPYRKEIRTFLEKRNLHYTPKFSQVVPLFFVWLALML FT APLLAPAPFWVTAIAFFITFGWMWLIFPHVDGTRALAFVDTPPRT" FT misc_feature complement(order(569222..569278,569291..569341, FT 569405..569470)) FT /note="3 probable transmembrane helices predicted for FT DIP0602 by TMHMM2.0" FT misc_feature complement(569504..569617) FT /note="Signal peptide predicted for DIP0602 by SignalP 2.0 FT HMM (Signal peptide probability 0.975) with cleavage site FT probability 0.273 between residues 38 and 39" FT CDS 569646..570416 FT /transl_table=11 FT /locus_tag="DIP0603" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49120.1" FT /translation="MTGCSHRFYYSHMIQTSVRSFEVGEDLASMAVDERISLLRSRMQS FT ISKSGDFSLDYNCKTADKNIIPLSDPLSHVLPWGGLPRGMIVESTITPLLAILFIAQVS FT GSGRRVGVVGWPDLNYAGVLGYGGCYERIFAVPQQERTSLRVVTALAHGCDLVITRAGP FT TPRTYTPLQTQRFRNSLRSDAGCVIMMGDHVVSPAARLASAVVGYHGIGKGTGRIKAVE FT ITVTGIAKGFYRTSRVIVGKHIAPAAEKTTMKVV" FT CDS 570425..571951 FT /transl_table=11 FT /locus_tag="DIP0604" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 56.7 kDa protein Rv3394c or MTV004.52c TR:O50419 FT (EMBL:AL009198) (527 aa) fasta scores: E(): 2e-34, 32.63% FT id in 527 aa" FT /protein_id="CAE49121.1" FT /translation="MRALALWFPDWPVQAAYSDGIVQGHRAVMIVDQRRVMVCNARARK FT AGIRRGMLVKHALALDENVMMVPYSPERDTRVFERIVRDIDQVAANVEIARPGIVLIDV FT QGAGAFHGSEEKAAEKIMDVTSKSGMESFVGIADDIPTAIIAARRNAVVPLDGSVRYLD FT SQPTELLRVEEALECDPDTVAHLQTCGLTTLGDIARISLRDITTRFGPRGHHCWTIATA FT QTQRTMSTPTSEIDHSVSITPEDPITRIDEAFFLARSLATQLHNAGLTCHRIKIIAVIG FT NQAHERTWRTRGDLSDHAISDRVRWQLEAWLASVPEGIDDSVGIVQLTLRPYECMRPSQ FT PQLWGTNKSDEESEQRMIARVQALVGPEFFVAPFQKGGRGSTDCVGWAPVGERRYADER FT VWNAALPAPLPVIVDTEDIKITDARENAVTITATMQLSREPERFHYGRDVYTVVNWAGP FT WPVDDAWWQHEYSGMRARLQIVAEKDTAAQAWVVAWEEEHGRWLAEGRYE" FT misc_feature 570530..570868 FT /note="ProfileScan hit to PS50173, UMUC domain FT (DNA-repair)." FT CDS complement(571955..572656) FT /transl_table=11 FT /locus_tag="DIP0605" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49122.1" FT /translation="MHKNPMDGFAAALGRDVEASTNDCAPVFTPAYRRRTLPTARALVA FT VGTACLMGLVGCSNGSDAPDTVQGTAGKASLASSSTSSNAGLTPLGDASIESKTQRPDM FT SEGIVTSVRVGHHETFDRVVFDFEGTGAPGWFVDYTDSPAQQGSGFPIEIKGNAALMVN FT IDGIALPFELGKPDPQIGVVPGVGNITEVKAAGTFEGRSQFVVGLDRKHPYSVQMLREP FT TRVVIDIRSQS" FT CDS 572761..573639 FT /transl_table=11 FT /locus_tag="DIP0606" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 31.3 kDa protein TR:Q93QX1 (EMBL:AF159510) (287 aa) fasta FT scores: E(): 3.9e-56, 51.52% id in 295 aa" FT /protein_id="CAE49123.1" FT /translation="MTQLCSDVRVSPLPGTAKVGDTYILFEHHGPWSHDILDGGTFDKE FT TSAALKAMGCGFYLIRRHGREGRIERPKKTAYLVFGSAGIAEKLMVDDVTDLLKLDVSG FT PGKNRQFGAEQEAQPIILVCTHAKRDACCAIKGRPMAQALTEEFPDSPVWECSHTKGHR FT FAPSMVLMPWGYTWGQLNKPAAFDMYRYAQRGQLFLPGNRGRGIWPMKGQIAEVAVAQQ FT LAQEGETVTLGQLRVESIEEAQAHVADSHTARTWTVFLREEVVAGIVDSCHKPPKTGTA FT WVADRVKENGA" FT CDS complement(573656..575113) FT /transl_table=11 FT /locus_tag="DIP0607" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 33.4 kDa protein Rv3104c or MTCY164.14c TR:O05781 FT (EMBL:Z95150) (308 aa) fasta scores: E(): 1.3e-15, 33.94% FT id in 271 aa" FT /protein_id="CAE49124.1" FT /translation="MPYAYIMELTKHWIIAHGFALAILVIIGFLIPRIGRRIINDMSHA FT IDEDTEASKGRKAIIGAIVYIAEAIAYAALIITAMHNLGINLAAAAIPATVVSAAVGFG FT SQKIIGDLLGGFFIITEKQYGVGDWVKFFGSAATVEGDVVKMTLRATTIRTINGDEITV FT PNGEARMCVNSSARWARAVISIPVPITAGSSMAEIKTRTLAAAQHAINDPELSPHIRSD FT ITFQAATDVIPPTAMGLPWTATMRLLIDVAPGKQWLIERGVRAAVIDEWWKDYGEKASS FT AVVLSEGIDDSFRQFSLDTHTPPVLDEETHSTNPPADPDPETARALTHAAETIDLPRTE FT VMREIQEQSEEDAPPQRSHGLLSFGGRVRPSTSILIICLLGFLALGSMTLSGGENNKAG FT WLAPTQTPIPTVPATPMRTESSIPSESVEPSTPSMPSSSAESTMPLPSSSPSSTPSETT FT LETPTTIDEPTVESSSSPSASESTTAP" FT misc_feature complement(573671..573856) FT /note="ProfileScan hit to PS50324, Serine-rich region." FT misc_feature complement(574274..574924) FT /note="HMMPfam hit to PF00924, Mechanosensitive ion FT channel" FT misc_feature complement(order(574799..574864,574886..574936, FT 575009..575074)) FT /note="3 probable transmembrane helices predicted for FT DIP0607 by TMHMM2.0" FT CDS complement(575214..575891) FT /transl_table=11 FT /locus_tag="DIP0608" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Staphylococcus aureus (strain N315) FT SA0421 protein or SAV0463 TR:BAB56625 (EMBL:AP003130) (219 FT aa) fasta scores: E(): 1.7e-31, 46.6% id in 206 aa, and to FT Salmonella enteritidis integral membrane protein SfbC FT TR:Q9S4Y9 (EMBL:AF102556) (202 aa) fasta scores: E(): FT 8.9e-28, 42.71% id in 199 aa" FT /protein_id="CAE49125.1" FT /translation="MTTHILAADWSRLGDTFTEAILDTLIMVSVTLVVGGLLGLGLGVL FT LYTTRTGGILRNRFVYTVINILVNFVRPIPFIIMITAFGPLTLRVVGTTIGREAAMFIM FT SIAATFAVARIVEQNLVSIDPGVIEAARAMGASPWKIITSVIIPEALGPLVLGYTFIFI FT AIVDMSAMAGYIGGGGLGDFAIVYGYRAYDWQVTYVATFVIILIVQIAQLFGNWLSKKI FT MRR" FT misc_feature complement(order(575238..575303,575364..575429, FT 575553..575618,575649..575714,575751..575816)) FT /note="5 probable transmembrane helices predicted for FT DIP0608 by TMHMM2.0" FT misc_feature complement(575325..575537) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature complement(575448..575534) FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS complement(575888..576910) FT /transl_table=11 FT /locus_tag="DIP0609" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Bacillus halodurans ABC transporter FT BH3481 TR:Q9K789 (EMBL:AP001518) (338 aa) fasta scores: FT E(): 1.1e-47, 48.61% id in 325 aa, and to N-terminal region FT of Escherichia coli ATP-binding protein ABC or B0199 FT SW:ABC_ECOLI (P30750) (343 aa) fasta scores: E(): 3.9e-43, FT 55.2% id in 250 aa" FT /protein_id="CAE49126.1" FT /translation="MNGTRIEFEGITKVFDSGKKNITALDGVTLTVEPGEILGVIGYSG FT AGKSTLVRMINGLDTPTSGKLLLDGTDIVGMSEKKLRDIRAHIGMIFQQFNLFTSRTAA FT GNIEYPLKLAGVDKAERKRRVDELLAFVGLSDRGGNYPEELSGGQKQRVGIARALANNP FT ALLLADEATSALDPETTHEVLELLRKVNRELGITIVVITHEMDVIRSIADKVAVMEAGK FT VVEYGSVYEVFSHPQTNVAKRFVSTSLRNTPDAIESEDLLAHEGRLFTITLSENSGFFT FT AAAKAKDAGASIGIVHGGITTLQKHSFGKVTVRLNGEKSVIDDFYAYLTTTTDIQEIQR FT " FT misc_feature complement(576245..576811) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(576248..576808) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(576260..576478) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(576434..576478) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(576737..576802) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(576764..576787) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(576948..577820) FT /transl_table=11 FT /locus_tag="DIP0610" FT /product="Putative ABC transport system secreted protein" FT /note="Similar to Escherichia coli lipoprotein-28 precursor FT NlpA or B3661 SW:NLPA_ECOLI (P04846) (272 aa) fasta scores: FT E(): 1.9e-20, 34.36% id in 259 aa. Possible duplication of FT the CDS upstream, CDIP0611 (66.667% identity in 288 aa FT overlap)" FT /protein_id="CAE49127.1" FT /translation="MNFTKFRTALSILSVTVVAATGLVACSGGSSDANTIKIGTTDSTK FT KAWDVWKDKAKEQGIDLEVVDFSDFSTPNQALSQNRLDVNLFQHLKFLAEYNVKSKSDL FT VPVGSTEIIPLALFWKGHDSLDGIEGQSVAIPNDPTNQARAINVLVANKLITLKTPGMS FT TPTPADVDTAKSKVTLTPVEAASAPAAYGEGKPAIINNTFLERSGIDAKTAVIQDDPAS FT TEAEPYINVMVTTKENKDNPRWAQLIELWHTDEVQKALAEDSKGTSVEVKRSPEELQAI FT LDRLEAEVK" FT misc_feature complement(577722..577820) FT /note="Signal peptide predicted for DIP0610 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.734 between residues 33 and 34" FT CDS complement(577994..578866) FT /transl_table=11 FT /locus_tag="DIP0611" FT /product="Putative ABC transport system secreted protein" FT /note="Similar to Escherichia coli lipoprotein-28 precursor FT NlpA or B3661 SW:NLPA_ECOLI (P04846) (272 aa) fasta scores: FT E(): 1.5e-20, 33.83% id in 266 aa. Possible duplication of FT the CDS downstream, CDIP0610 (66.667% identity in 288 aa FT overlap)" FT /protein_id="CAE49128.1" FT /translation="MKLRRSVALVSASLIAATGLVACSNSSDSSDQTTVKIGTTDGSKK FT SWKVFEDKAKEAGIKLDIKNFSDYSTPNDALAQDQLDVNLFQHLKFLAEYNVGKNADLT FT PVGATEIVPLALFWKDHTSLDGIEGKSVAIPNDPSNQGRAINVLVQAKLITLKKEGLIT FT PAPSDVDEAKSKVKLTPVDAAQTTTAYGEGTPAIINNSFLDRAGIDPKLSVFQDDPNSA FT EAEPYINAFVTKAEDKDDANIAKLVEIWHSKEVQDAVAEDSKGTSVPVQRTAEELKKIL FT DRLEADQKK" FT misc_feature complement(578780..578866) FT /note="Signal peptide predicted for DIP0611 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.356 between residues 29 and 30" FT CDS 579083..582202 FT /transl_table=11 FT /locus_tag="DIP0612" FT /product="Putative DNA polymerase" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L10 RplJ or DnaE2 or Rv3370c or MTV004.28c FT TR:O50399 (EMBL:AL009198) (1079 aa) fasta scores: E(): FT 2e-101, 49.3% id in 1083 aa, and to Bacillus subtilis DNA FT polymerase III alpha subunit DnaE SW:DP3A_BACSU (O34623) FT (1115 aa) fasta scores: E(): 3.3e-19, 29.9% id in 1060 aa" FT /protein_id="CAE49129.1" FT /translation="MVDWVSGVNGKPLKWSQLEGVLSGTYPQEFKLANVGGSGSGSEKI FT RYYSSQPFAELHAASYYHFLHGANSPQDMVAAACQQGMSALALIDRDGFYGAMEFAEAA FT ATSGLPTVFGAELTLAPDRILTVLARGVEGYTSLSRLITQARMRGSKDVTIYPPLAEIV FT ESMGKNCRFLLNHSWCTDESLLEIFYPDTVVLEYGVTMRPEDVDHHELLDSIRQRYGFM FT AIASAVPSAVDRVSARVAGAKQALAQRESLPQATPRLHPMGSTWMRGGDELAGSVDKQL FT LDASVEVARDCAFALDLVAPNLPRWPVPDEMAHLTGLVNARFDARYRGRSEDVKNQARA FT QIHHELAVIKELGFPGYFLIVDDIVSFCHTNNILCQGRGSAANSVVCFVLGITNVEPIS FT TGLLFERFLSRDREGPPDIDIDIESGRRDAVITYVYDTYGRDNAAQVANVITYRTKAAL FT RDAARALGYPNTSADAWSTNPDEAPNAVRFLAEQLKGQPRHLGIHAGGMVICDRPIADV FT VPTEWARKHGRSVVQWDKESCASAGLVKFDLLGLGMLEALHHMIDLVVETTGTTINLWE FT IDLAEPEIYTMLSNGDAVGVFQVESRAQLATLPRLRPREFFDLVVEVALVRPGPIQGGS FT VHPYIRRRNGLEAVTYEHPILERSLRKTLGVPLFQEQLMHIAVDAAGFSGGEADELRRA FT MGSRRSVDTMNRMKRRFFAGLRRNNITGDIAGILWNKIVAFVAYGFPESHSQSFASLVY FT FSAWFKYHHPAEFYVGLLRAQPMGFYSPQSLLADARRKELTILSHNINKSQVEATVENG FT AIRLGLNMIKGVGKTEAEAIVAHAPYRDIADLSRRAGLGVAVIEALARSGALETLGVGR FT RQALWQAGAAATEKAAMLPGLSMVSAPSLPGMNAFELIVADIAMTGVSSENPVALLRRQ FT LELRGVIPASELLNCENARRILLAGVVTHRQRPQTAAGVTFLGLEDETGLANVVVSVGL FT WKRSRAVKVARAVLVRGVVHNADGVASVTADRVEELPFAEMMSAGSRDFR" FT misc_feature 579242..579439 FT /note="HMMPfam hit to PF02231, PHP domain N-terminal FT region" FT misc_feature 579242..579445 FT /note="HMMSmart hit to SM00481, DNA polymerase alpha chain FT like domain" FT misc_feature 581933..582157 FT /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding FT domain" FT CDS 582222..582692 FT /transl_table=11 FT /locus_tag="DIP0613" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCE126.11 TR:Q9X854 (EMBL:AL049630) (151 FT aa) fasta scores: E(): 1.4e-15, 41.21% id in 148 aa" FT /protein_id="CAE49130.1" FT /translation="MMLMGSTMNAVSPKLVKARYWAVVPFLVVTILGSAASAVFLWSWM FT WIVTGVWVAILAWAVWLIPAQVRRIGWREDPDELLITKGKLWRTLTVVPYGRLQFVDVQ FT EGPIARRCGLAEVEIHTASSTSDASIAGLPVADAYALRQRLTDKARERLSGL" FT misc_feature 582222..588171 FT /note="Putative iron uptake system" FT misc_feature order(582279..582347,582357..582410) FT /note="2 probable transmembrane helices predicted for FT DIP0613 by TMHMM2.0" FT CDS 582689..584029 FT /transl_table=11 FT /locus_tag="DIP0614" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor hypothetical 47.7 FT kDa protein SCE9.01 TR:Q9X8H4 (EMBL:AL049841) (436 aa) FT fasta scores: E(): 8.3e-18, 28.97% id in 428 aa" FT /protein_id="CAE49131.1" FT /translation="MSAIEQTALHEQRIDVSSMHRVHRLTPLLQFWHSIFALFVVIALN FT VDKDEVITVLQHQKYLWWLLGGIVVSFLVVWAISGVWWRSIGYSITDTEVIVAKGVINR FT SVRSARRDRIQAVDIVESVLARIFRVAEVRIETAGGNDSVLTIGYVSRDRAGKIRRFLI FT EGEIESTKNDLVVPVERILLATALTHGVWMAAFIGLWFVPGGAAVAIPMLVGVGPSVWN FT VIDTGWRFTLRLGQSFGGDLVDEGSADSDSEPTIHVEYGLADRRKQSIPLRRIHAVRMS FT QPVLWRLCGWWKVTVTVAGYGVGDKKAGTSVLLPVGSKAQAMALVAMLKGVTVDPESPK FT DVAFSSPRRARWVSPIDVSSQVVELLDDIVVVRWGVVSRRAALVQRSHVQELTCVEGPI FT QRWTRLRTVRLDLVHGPVTMSARDLDCDDASKLLTLMGDRKFNTLNS" FT misc_feature order(582773..582826,582869..582937,583229..583297) FT /note="3 probable transmembrane helices predicted for FT DIP0614 by TMHMM2.0" FT CDS 584097..585062 FT /transl_table=11 FT /locus_tag="DIP0615" FT /product="Putative ABC transport system exported protein" FT /note="Similar to Yersinia pestis periplasmic chelated FT iron-binding protein YfeA precursor or YPO2439 FT SW:YFEA_YERPE (Q56952) (311 aa) fasta scores: E(): 1.8e-19, FT 30.03% id in 303 aa" FT /protein_id="CAE49132.1" FT /translation="MRKIVGGVVGGIVISSLLVGCSGGQGASTSTKADDSKLGVIATTT FT QICDYVKQIDADVDLTCLLAPNASAHDHEMTREQMDALSKADILLKNGVDLEHFLDDAV FT ASSGFKGTTVDTSEGVNIAPWPFAPEDGEEPEFNNDPHIWTSPKNAKIQVANIGKALEA FT ADSAHADDYKKHVDSYISQLEDLDTWTTQSLKSVPEAERILFTSHDAFGYFSRDYNVKF FT IGAALSDFNEQQDATADHIAKAAQQVRDSKAKALFAENSNNPRSIEAVAKAAGVKLGGE FT LYGDSLGPDVTYTQSIVHNVETLIDGWGGKIAEKPASIAR" FT misc_feature 584097..584195 FT /note="Signal peptide predicted for DIP0615 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.729 between residues 33 and 34" FT misc_feature 584109..584177 FT /note="1 probable transmembrane helix predicted for DIP0615 FT by TMHMM2.0" FT misc_feature 584121..585023 FT /note="HMMPfam hit to PF01297, Periplasmic solute binding FT protein family" FT misc_feature 584205..584261 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 584205..584270 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 584334..584387 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 584334..584393 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 584511..584570 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 584685..584738 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 584685..584750 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 584838..584891 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 584850..584906 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT misc_feature 584904..584960 FT /note="FPrintScan hit to PR00691, Adhesin B signature" FT misc_feature 584928..584987 FT /note="FPrintScan hit to PR00690, Adhesin family signature" FT CDS 585131..585916 FT /transl_table=11 FT /locus_tag="DIP0616" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Yersinia pestis chelated iron transport FT system membrane protein YfeB or YPO2440 SW:YFEB_YERPE FT (Q56953) (296 aa) fasta scores: E(): 1.7e-20, 37.05% id in FT 251 aa" FT /protein_id="CAE49133.1" FT /translation="MHTDSSAAGKNFERTTGAATDSAPVVRFDAASFSYGHGSNRVTVL FT EGIDGSLHRGEALALIGPNGAGKSTVLKGLVGIVDSSQLHLASGAIGYVPQTAELDPTF FT PVTARDVVAMGIRGAKKNRWWWPSFLQPNPAKDPRTMAALQRVGLADRANYRFGQLSGG FT QRQRVLIARALVSQPMLMLLDEPFNGLDDPNRKALLAILSEIKKEGVAIVVSTHDLVLA FT EETCDKVLLLAGRQVAFGPINDVLQPDVIAQAYGGHHAH" FT misc_feature 585290..585835 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 585293..585835 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 585299..585376 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 585314..585337 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 585608..585652 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 585608..585823 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 585906..586739 FT /transl_table=11 FT /locus_tag="DIP0617" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Yersinia pestis chelated iron transport FT system membrane protein YfeC or YPO2441 SW:YFEC_YERPE FT (Q56954) (294 aa) fasta scores: E(): 1.6e-13, 26.81% id in FT 276 aa" FT /protein_id="CAE49134.1" FT /translation="MLIELSEITGIAPYLLRPLILLTVLGFVSGLVGVVVNLRSLEFNA FT EAVVHSVFPGIVAGAVFGGIDMIIPAASTVAALVAIALTFASRHSEAGTAVVLTSFFSV FT GIVLSLKKGDMSGQLEALMFGRLLEVTDERLIQALIVCAIAVAVMLWTWRTHIFVAFDR FT EGARATGVNLLTIDLAINVAIAAVVVASSTAIGTLLVIGYLCIPGAAARLIATRVHTMV FT PLAMAFGIVGGYLGVWLSGLSPRVSPQASVALSVVAMYGVGLIIYRLRGSVGRRS" FT misc_feature 585942..586706 FT /note="HMMPfam hit to PF00950, ABC 3 transport family" FT misc_feature order(585942..586010,586068..586163,586182..586235, FT 586308..586376,586413..586472,586482..586550, FT 586563..586631,586659..586712) FT /note="8 probable transmembrane helices predicted for FT DIP0617 by TMHMM2.0" FT CDS 586736..587542 FT /transl_table=11 FT /locus_tag="DIP0618" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Lactococcus lactis manganese ABC FT transporter permease protein MtsC TR:Q9CFZ4 (EMBL:AE006363) FT (281 aa) fasta scores: E(): 3.3e-13, 27.96% id in 261 aa" FT /protein_id="CAE49135.1" FT /translation="MTAILLLPTVELMIVGALCGIVGVFAVLKGRVFFTESITHATFPG FT AILGVVIAGRNGLFLGALLMCVGMSWLMRRLTRLSTQTAQASAGVVLTVGFALGYFLNK FT WFAPLPIRIEGFLAGSVLSVRLIDVIVSAVVLVVVVGIVNSFHTSLMLYCFDEPGFVAA FT GGKQHRAEALILGMIVATVVCVIPAIGTILSIALIAAPAAGLKTVVASPRQLIVAAPVA FT GVVISLAGLFIAVYFKLSVGGTIAIVAGVFYCLCMSLSCLKSPRTT" FT misc_feature order(586748..586816,586859..586927,586985..587053, FT 587096..587164,587267..587335,587378..587446, FT 587450..587518) FT /note="7 probable transmembrane helices predicted for FT DIP0618 by TMHMM2.0" FT misc_feature 586760..587515 FT /note="HMMPfam hit to PF00950, ABC 3 transport family" FT CDS 587557..588171 FT /transl_table=11 FT /locus_tag="DIP0619" FT /product="Putative diphtheria toxin repressor 2" FT /note="Similar to Mycobacterium tuberculosis iron-dependent FT repressor IdeR or DtxR or Rv2711 or MT2784 or MTCY05A6.32 FT SW:IDER_MYCTU (Q50495) (230 aa) fasta scores: E(): 1.1e-10, FT 31.84% id in 201 aa and low similarity to Corynebacterium FT diphtheriae diphtheria toxin repressor DtxR SW:DTXR_CORDI FT (P33120) (226 aa) fasta scores: E(): 7.7e-08, 35.08% FT identity in 114 aa overlap" FT /protein_id="CAE49136.1" FT /translation="MHEATGKPVSLGELASRMSQKTPTASEAVKKLVARGLLDHERYGG FT IMLTEQGEALAKQMVRRHRLVEMFLFETLGFGWDEVHEEAEILEHAMTDKLLQRIDDHL FT GNPSRDPHGDPIPSEEGIVDSVPIHQLGEFAVGEEVIIERIHDRDANLLRYLAEHGVLP FT GVRVIIGEPAYPGMNIVKVGDRDIPLAESSLWAINARKIDS" FT misc_feature 587584..587883 FT /note="HMMSmart hit to SM00529, Helix-turn-helix diphteria FT tox regulatory element" FT misc_feature 587701..587913 FT /note="HMMPfam hit to PF02742, Iron dependent repressor, FT metal binding and dimerisation domain" FT repeat_region 588346..588377 FT /note="Possible inverted repeat" FT CDS 588393..589238 FT /transl_table=11 FT /gene="folD" FT /locus_tag="DIP0620" FT /product="methylenetetrahydrofolate dehydrogenase" FT /note="Similar to Mycobacterium tuberculosis FT methylenetetrahydrofolate dehydrogenase FolD or Rv3356c or FT MTV004.13c TR:O50385 (EMBL:AL009198) (281 aa) fasta scores: FT E(): 4.3e-78, 71.78% id in 280 aa, and to Bacillus subtilis FT FolD bifunctional protein SW:FOLD_BACSU (P54382) (283 aa) FT fasta scores: E(): 1.2e-47, 46.09% id in 282 aa" FT /protein_id="CAE49137.1" FT /translation="MSAIKLDGNLYRDEIFEDLKGRVNSLREKGIVPGLATVLVGDDPA FT SHAYVRMKHKDCEIVGVKSIRKDLPADVTQEELLAVIDDLNADPECTGYIVQLPLPKHL FT DENAVLERIDPAKDADGLHPVNLGKLVLNEPAPLPCTPNGAIHLLRRFGVELDGKKVVV FT IGRGVTVGRPIGLMLTRRSENSTVTLCHTGTRDLAAETREADVIVAAAGKAHMLTADMV FT KQGAAILDVGVSRVDGKLLGDVHPDVWDVAGAVSPNPGGVGPLTRAFLIRNVVERAERA FT " FT misc_feature 588393..588752 FT /note="HMMPfam hit to PF00763, Tetrahydrofolate FT dehydrogenase/cyclohydrolase, catalytic domain" FT misc_feature 588432..589226 FT /note="BlastProDom hit to PD002300, PD002300" FT misc_feature 588489..588557 FT /note="FPrintScan hit to PR00085, Tetrahydrofolate FT dehydrogenase/cyclohydrolase family signature" FT misc_feature 588612..588695 FT /note="FPrintScan hit to PR00085, Tetrahydrofolate FT dehydrogenase/cyclohydrolase family signature" FT misc_feature 588717..588782 FT /note="FPrintScan hit to PR00085, Tetrahydrofolate FT dehydrogenase/cyclohydrolase family signature" FT misc_feature 588756..589235 FT /note="HMMPfam hit to PF02882, Tetrahydrofolate FT dehydrogenase/cyclohydrolase, NAD(P)-binding domain" FT misc_feature 588852..588914 FT /note="FPrintScan hit to PR00085, Tetrahydrofolate FT dehydrogenase/cyclohydrolase family signature" FT misc_feature 589005..589094 FT /note="FPrintScan hit to PR00085, Tetrahydrofolate FT dehydrogenase/cyclohydrolase family signature" FT misc_feature 589155..589211 FT /note="FPrintScan hit to PR00085, Tetrahydrofolate FT dehydrogenase/cyclohydrolase family signature" FT CDS 589231..589557 FT /transl_table=11 FT /locus_tag="DIP0621" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49138.1" FT /translation="MPRLSPFDNPHDVGRKESPIPSYLQYIAVAAFVGIVVSSGIFAFT FT EHWRRATFALGVALLFLAVLRIVCDSKILGVLAVRSVVFDVAFSLVVGGMMVFLSYSID FT SLGS" FT repeat_region 589265..589296 FT /note="Possible inverted repeat" FT misc_feature order(589294..589362,589381..589434,589471..589539) FT /note="3 probable transmembrane helices predicted for FT DIP0621 by TMHMM2.0" FT CDS complement(589692..590957) FT /transl_table=11 FT /locus_tag="DIP0622" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49139.1" FT /translation="MQPTRKSWKNMTVGSVERPEKHSYPQPHITGSTRRRGRRNLGVFI FT NIGGIFMNTTACFAHTDMNDPFSRHLIRLNQAEVDFWLSVEPDKFRDFHTQIDEIATRM FT SLSRREVKENLRVGEMLRRFPRLRACVEKHHHITMSRLKAIERQVMAIEPKYIARVDAH FT LTNYFTPKVKNQVIPQVATLSKQLRDYITTIDPSAAKKPQDQQKRSATFKRNLNGHTRL FT SIHITDAEAVEIRTLMKKQHEDEPVDAFMKLIRSKARTKVVLNTFKTGTGHLYMVGAGT FT IPEESITIDSQRTIDLNDHTHSYAPTEEIRAAVMLLDRHCRYPGCTVDALECDLDHVIN FT HDEGGETSIANLACLCRFHHNIKTEQRIHYSLDANRIATFHFRNGATKTTQPGGIKVKH FT RFSQTWQRHEQQRIRTRRNQSA" FT misc_feature complement(589857..589997) FT /note="HMMPfam hit to PF01844, HNH endonuclease" FT misc_feature complement(589875..590033) FT /note="HMMSmart hit to SM00507, HNH nucleases" FT misc_feature complement(590769..590834) FT /note="1 probable transmembrane helix predicted for DIP0622 FT by TMHMM2.0" FT CDS complement(591014..592117) FT /transl_table=11 FT /gene="metX" FT /gene_synonym="metA" FT /locus_tag="DIP0623" FT /product="homoserine O-acetyltransferase" FT /EC_number="2.3.1.31" FT /note="Similar to Corynebacterium glutamicum homoserine FT O-acetyltransferase MetX or MetA SW:METX_CORGL (O68640) FT (379 aa) fasta scores: E(): 1.4e-99, 67.29% id in 373 aa" FT /protein_id="CAE49140.1" FT /translation="MLTTTGTLTHQKIGDFYTEAGATLHDVTIAYQAWGHYTGTNLIVL FT EHALTGDSNAISWWDGLIGPGKALDTNRYCILCTNVLGGCKGSTGPSSPHPDGKPWGSR FT FPALSIRDLVNAEKQLFDHLGINKIHAIIGGSMGGARTLEWAALHPHMMTTGFVIAVSA FT RASAWQIGIQTAQISAIELDPHWNGGDYYSGHAPWEGIAAARRIAHLTYRGELEIDERF FT GTSAQHGENPLGPFRDPHQRFAVTSYLQHQGIKLAQRFDAGSYVVLTEALNRHDIGRGR FT GGLNKALSAITVPIMIAGVDTDILYPYHQQEHLSRNLGNLLAMAKISSPVGHDAFLTEF FT RQMERILRHFMELSEGIDDSFRTKLER" FT misc_feature complement(591065..591898) FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase fold" FT CDS complement(592180..592731) FT /transl_table=11 FT /locus_tag="DIP0624" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49141.1" FT /translation="MNPQSTSAFQSLYPDINPAHSLPLTAWERISMALAVGIFSFGVTF FT GDLIIAGAGLGLVLFTIIAPSQKTSRKIRTEAKNRFPNEPWAETHHNANATIIAMALCW FT LVIIGINLATLWWAPPSQTTYLAAGVSILSAIIVWFLPGAHPLWNRRRIASRKQQSTGR FT RRQAPKRSSHPQTAEFSQQQ" FT misc_feature complement(order(592285..592350,592381..592446, FT 592540..592605)) FT /note="3 probable transmembrane helices predicted for FT DIP0624 by TMHMM2.0" FT CDS 592944..594719 FT /transl_table=11 FT /locus_tag="DIP0625" FT /product="Putative membrane protein" FT /note="Similar to the C-terminal region of Corynebacterium FT ulcerans HtaA TR:Q9EZ58 (EMBL:AF304009) (410 aa) fasta FT scores: E(): 4.9e-58, 54.14% id in 410 aa, and to FT Streptomyces coelicolor hypothetical 48.2 kDa protein FT SCC75A.17c TR:Q9RKQ7 (EMBL:AL133220) (477 aa) fasta scores: FT E(): 4.9e-06, 26.25% id in 579 aa" FT /protein_id="CAE49142.1" FT /translation="MIIQKRSLGLMAAAVLTLAPLAISTAPAQAADSNQCSFNWGIRQS FT YRHYILKGAAGKTGGQWATQGIGFSGDKTGIDGAFNFTPGKARIDGNSATIPFPGFIHF FT KGHDHGSGVYLLDMTFSDWKVVTHGSTADILVDYVSYDSDMSNTKDRGPKITGDDVVLA FT TINLNTPADPASGSIDLSGSTTLSPEGAKLFIAYDVGSPLDPTSGTVALDGSCPSPIGP FT NSDGNGRNGNKKRSVQSISGNFTGFNKEAMAILSETNDTMNAVTIFMDNAGEFLDELDE FT FNRRGTKPTDNAHASSPESTTASSNISDATRTSPQTQRSAGTTRGSSERIANSSPQCDA FT SSRGVTQAHAAWGLKKSFQSYITGSIAKGQWNLDGVGYSNGEFTFSGASGAVDPQAKSG FT FVKFGGTMRFSGHHGILDLNISNPEIVFNGATGTLFAQVRSSDMEGKKSDYGRVAIGNL FT TFSSLNASETAASGKATMTLHPDGAGAFAGFYEAGSDLDPITFDAQLGGAADCSTGTNA FT AAVPVSGGKESSIPSGKSEGGTSAGYESGAKNFKIRSAATDDSGIDPNMYVLLVIAAFV FT VAGGSMGRLVVNNPV" FT misc_feature 592944..593033 FT /note="Signal peptide predicted for DIP0625 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.987 between residues 30 and 31" FT misc_feature 592944..598848 FT /note="Putative heme-related iron uptake system" FT misc_feature 594639..594707 FT /note="1 probable transmembrane helix predicted for DIP0625 FT by TMHMM2.0" FT CDS 594730..595791 FT /transl_table=11 FT /gene="hmuT" FT /locus_tag="DIP0626" FT /product="Iron-related transport system receptor precursor FT protein" FT /note="Identical to previously sequenced Corynebacterium FT diphtheriae HmuT precursor TR:Q9XD89 (EMBL:AF109162) (353 FT aa) fasta scores: E(): 3.9e-123, 98.86% id in 353 aa, and FT highly similar to Corynebacterium ulcerans hemin receptor FT precursor HmuT TR:Q9EZ57 (EMBL:AF304009) (351 aa) fasta FT scores: E(): 2.6e-99, 79.83% id in 352 aa" FT /protein_id="CAE49143.1" FT /translation="MKSLLRACMSVVCACALVGCGVQGTYDSTKDLRESLPKAGDVKDP FT RSFTGVSDVRDFDDVRPVSESVSPSLPVHLTDADGFDVEVTDVSRIIALDIYGTYTKTL FT EGLGLADKIVGRTVSSTENVLKDVPVVTEGGHNINVEAVLSLHPSLLIVDHSIGPRDAI FT DQIRNAGVTTVVMEPTRTIDSVAEDIKTLGSVVGLSDEASILAERSVHEISAAREAIAA FT IAPSDPMRVAFLYARGNGGVFFIMGEGTGAKDLIEGVGAKDMGAEYKLSYAEPANAEAL FT AKINPEAIIMMTAGLESTGGIDGLLARPGVAQTIAGKNRRVITIPDGQSLAFGPMTGQT FT LLRTAQALYDPQV" FT misc_feature 594730..594801 FT /note="Signal peptide predicted for DIP0626 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.508 between residues 24 and 25" FT misc_feature 594991..595716 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT CDS 595775..596827 FT /transl_table=11 FT /gene="hmuU" FT /locus_tag="DIP0627" FT /product="Iron-related transport system membrane protein" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae HmuU TR:Q9XD88 (EMBL:AF109162) FT (350 aa) fasta scores: E(): 6.1e-120, 98% id in 350 aa, and FT highly similar to Corynebacterium ulcerans permease HmuU FT TR:Q9EZ56 (EMBL:AF304009) (350 aa) fasta scores: E(): FT 4.3e-100, 81.14% id in 350 aa" FT /protein_id="CAE49144.1" FT /translation="MTHRYSKRSDDVFVLRARRRVMLFVVLVVLVLASVITSLALGQYY FT VPLRDLLTILTQPDSSSLMHNVIWEIRLPRIVLGLLVGACLGVAGTLMQAVFANPLAEP FT SIIGVTSGAGVGAAAVIVFNVGILGTFTVPAAAFLSAVVVTVIIYQLARHQGKVAIVNL FT ILTGIAINAVCNALISFLVYLAPTSNREEIVFWQMGSLNGAQWKHVWVVAPIALVGIVI FT SSQIGKQLDVLALGERAAGHTGINVGRLRIIAIAASTILTAAAVSFAGLIGFVGLIVPH FT LLRSISGPENRLLLPASALAGAVLIACADVAARTMIPFADLPIGIFTALVGGPTFFVLL FT RRMLKKGSVH" FT misc_feature 595775..595900 FT /note="Signal peptide predicted for DIP0627 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.495 between residues 42 and 43" FT misc_feature order(595835..595903,596000..596068,596087..596155, FT 596165..596233,596252..596320,596540..596608, FT 596645..596713,596726..596794) FT /note="8 probable transmembrane helices predicted for FT DIP0627 by TMHMM2.0" FT misc_feature 595898..596800 FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature 596405..596569 FT /note="ProfileScan hit to PS50281, Binding-system dependent FT bacterial transporters (araH, livH/limM families);" FT misc_feature 596477..596800 FT /note="BlastProDom hit to PD001557, PD001557" FT CDS 596848..597681 FT /transl_table=11 FT /gene="hmuV" FT /locus_tag="DIP0628" FT /product="Iron-related transport system ATP-binding FT protein" FT /note="Almost identical to the previously sequenced FT Corynebacterium diphtheriae HmuV TR:Q9XD87 (EMBL:AF109162) FT (277 aa) fasta scores: E(): 3.2e-88, 97.83% id in 277 aa, FT and to Escherichia coli iron (III) dicitrate transport FT ATP-binding protein FecE or B4287 SW:FECE_ECOLI (P15031) FT (255 aa) fasta scores: E(): 1.2e-23, 41.94% id in 236 aa" FT /protein_id="CAE49145.1" FT /translation="MQPESLVRVRDLSVSVGQKRLLCDINFDAYAGEVTGLIGPNGAGK FT STLLAALSGDLERQSGSIDICGLDPVDSSARELARVRSVMLQDVSVSFQFLVRDVVAMG FT RRPWEGTDRQEFDDRLIEAALSATDAAHLAGRDIVTLSGGERARVALSRVLAQQTPVVM FT LDEPTAALDISHQEQVLGLMQSIARRTGIAVIVVLHDLNAAAAYCDHIVCLADGSIVAD FT GSVGDVYTDETLSSVYGWPIHVDVSEGIVNSVQPLRGRTTQNQDDFVGLSLQSLV" FT misc_feature 596938..597498 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 596941..597498 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 596947..597024 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 596962..596985 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 597268..597312 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 597268..597486 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 597871..598848 FT /transl_table=11 FT /locus_tag="DIP0629" FT /product="Membrane protein" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae secreted protein precursor FT TR:Q9XD85 (EMBL:AF109162) (339 aa) fasta scores: E(): FT 2.9e-99, 89.21% id in 306 aa" FT /protein_id="CAE49146.1" FT /translation="MLKRFSLPVAAAVAMTGFLVPQAVAEEPAAASQCEMVQVIESGTL FT KWGVKHSYRQYILNNKLANGNWKVAGDIKEVGEKRGKDFYFEVPVDPQISNLEIKDNKI FT VEAEINTKDSSIVFEGHHGSLYSELHNPYVTTKDNVVKAGVSYVGYYVPGKNMTEYKEA FT DRTEANKRSGRDTFGNGTTAGWTLNETDATLSGSNMRYVPQPKTKDNVIDGVDVIFMGQ FT YDGDYNSDLDDVKVDLKLKKVCKDEAEKLKAEYKKNVELASQKAAHSQSGSRTGGESTS FT TAPTSSTSGFNLSTLWSTILGISGVAALLGILFQVAQKAGWIRF" FT misc_feature 597871..597963 FT /note="Signal peptide predicted for DIP0629 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.502 between residues 31 and 32" FT misc_feature 598753..598821 FT /note="1 probable transmembrane helix predicted for DIP0629 FT by TMHMM2.0" FT stem_loop complement(598889..598947) FT /note="Score 60: 24/24 (100%) matches, 1 gaps" FT CDS complement(598958..600274) FT /transl_table=11 FT /locus_tag="DIP0630" FT /product="Putative methionine biosynthesis-related protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT transulfuration enzyme family protein MT3443 TR:AAK47787 FT (EMBL:AE007151) (449 aa) fasta scores: E(): 4.8e-93, 56.94% FT id in 432 aa, and to Pseudomonas aeruginosa FT O-succinylhomoserine sulfhydrylase MetZ or PA3107 FT SW:METZ_PSEAE (P55218) (403 aa) fasta scores: E(): 2.7e-26, FT 39.31% id in 435 aa" FT /protein_id="CAE49147.1" FT /translation="MPTKYDNSNANKWGFETRSIHAGQSVDSDTSARNLPIYLTSSYVF FT NDAEHAANRFNLSDAGPVYSRLTNPTVAAVEERLANLEGGVHAVLFASGMAAETAAILN FT IARAGSHIVSSPRIYGGTETLFAVTLARLGIETTFVENPDDPASWEAAVQDNTVALYGE FT TFANPQADVLDIPAIAEVAHKHQVPLIVDNTLATAALVRPLELGADVVVASLTKFYTGN FT GSGLGGVLIDGGNFDWTVTRNGEPIFPDFVTPDPAYHGLKYSDLGAPAFGLKARVGLLR FT DTGAAPSPLNAWITAQGLDTLSLRVQRHNENALAVAQFLANHEKVAKVNYAGLPDSPWY FT PVKEKLGFDYTGSVLSFDVKGGKNEAWRFIDALKLHSNLANVGDVRSLVVHPATTTHSQ FT SEESALLAAGINQATIRLSVGIESIDDIIADLTAGFDAI" FT misc_feature complement(598967..600229) FT /note="HMMPfam hit to PF01053, Cys/Met metabolism FT PLP-dependent enzyme" FT CDS complement(600526..602739) FT /transl_table=11 FT /gene="icd" FT /locus_tag="DIP0631" FT /product="isocitrate dehydrogenase [NADP]" FT /EC_number="1.1.1.42" FT /note="Highly similar to Corynebacterium glutamicum FT isocitrate dehydrogenase [NADP] Icd SW:IDH_CORGL (P50216) FT (738 aa) fasta scores: E(): 0, 83.31% id in 737 aa" FT /protein_id="CAE49148.1" FT /translation="MAKIIYTRTDEAPLLATYSLKPVVEAFASTAGIEVETRDISLAGR FT ILAQFPDYLNEDQKVDDALAELGELAKTPEANIIKLPNISASVPQLKAAIAELKAQGFA FT LPEYPDSPATDEEKDVRARYDAVKGSAVNPVLREGNSDRRAPIAVKNFAKKNPHKMGVW FT SADSKTNVATMDANDFRHNEKSVIMPAADTLTIKHIATDGTETILKDGLKVLEGEVIDG FT TFLSAKALDAFLTEQVQRAKNENVLFSAHLKATMMKVSDPIIFGHVVRAYFADVFATYG FT DQLNAAGLNGENGLAAIYSGLDALDNGAEIKAAFDAALEAGADVAMVNSAKGITNLHVP FT SDVIIDASMPAMIRTAGHMWNKDDQEQDTLAVIPDSSYAGVYQVVIEDCKKNGAFDPTT FT MGTVPNVGLMAQKAEEYGSHDKTFKIAADGKVVVVNAAGEALIEHDVEAGDIWRACQAK FT DAPIQDWVKLAVTRSRLSGMPAVFWLDPKRAHDRSLITLVKKYLADHDTEGLDIQIMSP FT TEATQFSIDRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAGGGLFET FT GAGGSAPKHVQQLVEENHLRWDSLGEFLALAESLRHFANTEGNTKAGVLADALDRATET FT LLNEGYSPSRKAGEIDNRGSHFFLTLNWAKELAAQTDDTALAETFAPVAAQLEDNKDTI FT AAALIDVQGTPVDLGGYYQPDDAKTAAVMRPVAEFNDIIDALK" FT CDS 602928..604208 FT /transl_table=11 FT /locus_tag="DIP0632" FT /product="Putative membrane protein" FT /note="Similar to Rhizobium meliloti putative transport FT transmembrane protein SMC02161 TR:CAC41922 (EMBL:AL591783) FT (411 aa) fasta scores: E(): 5.7e-56, 46.61% id in 384 aa, FT and to Streptomyces coelicolor putative transmembrane FT efflux protein SC1G2.16c TR:Q9RDR3 (EMBL:AL136500) (413 aa) FT fasta scores: E(): 4.7e-46, 41.62% id in 370 aa" FT /protein_id="CAE49149.1" FT /translation="MGDAHQGNMQTLLRYLVVLVNHLNKRKPVPRQTEITHRHRLIAML FT ALALGGFGIGVTEFVSMGLLSLIAEDFNVAESTAGHVITAYAMGVVVGAPVITAFTGMI FT PRRRLLILLMIAFTIGNALTVFTTSYPVLMAARFLAGLPHGAFFSVAGLAVASMAPEGQ FT RGRALAFVGMGLPVATVVGVPAVQALGFATTWKAAYVVVTIIGAITLALLWTLMPHMSK FT MKPTSPLTELGALKNGQVWASLLIGSVGFGGMFAVYTYISWTMTQRAGLPEALMWIVLM FT AYGLGMIAGNFIGGRLSDWSVEYGILTALICIVLTLVSFYFTSAYAWIAIINFALVGLS FT GSMLIPSLQIRLMDVAGRAQTLAAALNHSALNIANACGALLGGVVISAGYSYSAPALAG FT AALGCAAIIIWIPAHITRSKQERKQHS" FT misc_feature 603042..604199 FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature order(603060..603128,603171..603239,603252..603311, FT 603324..603392,603426..603494,603522..603590, FT 603648..603716,603744..603812,603825..603893, FT 603903..603971,604032..604100,604113..604172) FT /note="12 probable transmembrane helices predicted for FT DIP0632 by TMHMM2.0" FT CDS 604219..605124 FT /transl_table=11 FT /locus_tag="DIP0633" FT /product="Putative exodeoxyribonuclease" FT /note="Similar to Streptomyces coelicolor putative FT exodeoxyribonuclease SCE87.25c TR:Q9RKB3 (EMBL:AL132674) FT (274 aa) fasta scores: E(): 2.6e-27, 44.3% id in 307 aa" FT /protein_id="CAE49150.1" FT /translation="MQITTVNVNGIRAAVKQRSDANRGMLPWLEQCGSDVVLLQEVRAS FT EKDSLTALAPALDAGWHYVGAPAAAKGRAGVGILSRQPLRDVQVGLEGFVDSGRYIQAT FT LSDPDTGHDVVVASLYLPSGSADTDKQDEKYRFLDVFGPFLEQAAQDNPHMVVGGDWNI FT CHRMQDLKNWKTNRKKSGFLPDERAFMDSVFGVFPDSESQVSDAGQWAGAVDYTSQQRR FT TPANDPKWFDVARRLAPEDAAYTWWTYRGQAFDTNAGWRIDYQAATSAMLERATRCWVD FT KAAAYDLRWSDHSPLTVVYS" FT misc_feature 604219..604800 FT /note="HMMPfam hit to PF01260, AP endonuclease family 1" FT misc_feature 604912..605121 FT /note="HMMPfam hit to PF01260, AP endonuclease family 1" FT CDS 605270..605449 FT /transl_table=11 FT /locus_tag="DIP0634" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49151.1" FT /translation="MRISGIIALVVGIAAVLGGYFLTGNNDVAGMLGGILMGVGGATTI FT GGLIAIVAPRPRMQ" FT misc_feature 605270..605392 FT /note="Signal peptide predicted for DIP0634 by SignalP 2.0 FT HMM (Signal peptide probability 0.840) with cleavage site FT probability 0.222 between residues 41 and 42" FT misc_feature order(605282..605335,605363..605431) FT /note="2 probable transmembrane helices predicted for FT DIP0634 by TMHMM2.0" FT CDS 605642..606676 FT /transl_table=11 FT /gene="trpS" FT /locus_tag="DIP0635" FT /product="tryptophanyl-tRNA synthetase" FT /EC_number="6.1.1.2" FT /note="Similar to Escherichia coli tryptophanyl-tRNA FT synthetase TrpS or B3384 SW:SYW_ECOLI (P00954) (334 aa) FT fasta scores: E(): 4.2e-63, 53.59% id in 334 aa, and to FT Streptomyces coelicolor tryptophanyl-tRNA synthetase TrpS2 FT TR:Q9KZA7 (EMBL:AL353872) (339 aa) fasta scores: E(): FT 2.4e-84, 64.86% id in 333 aa" FT /protein_id="CAE49152.1" FT /translation="MTATVQENTQKKQRVLSGIQPTADSYHLGNYLGALKQWIELQDNY FT EAFYFIPDLHAITVDQDPRELRERTIAGAAQLLALGIDPHKSTLFVQSHVPEHAELGWV FT LTCLTGFGEASRMTQFKDKSAKRGADRTSAGLFTYPMLMAADILLYRPQFVPVGEDQRQ FT HLELTRTLAERFNSRFKKTFVVPDGIIPEGAAKIYDLQDPTSKMSKSGSNPKGLINLLD FT DPKVSAKRIRSAVTDNDGEIRFDKENKPGVSNLLVIQSALTGKTIDSLVDAYQGQGYGA FT LKVDTADALEAFVTPLKAQYDMYMSDRAELENVLALGAEKAREIASRTLADAYEHIGFL FT PPKR" FT misc_feature 605669..606526 FT /note="HMMPfam hit to PF00579, tRNA synthetases class I (W FT and Y)" FT misc_feature 605717..605767 FT /note="FPrintScan hit to PR01039, Tryptophanyl-tRNA FT synthetase signature" FT misc_feature 605867..605926 FT /note="FPrintScan hit to PR01039, Tryptophanyl-tRNA FT synthetase signature" FT misc_feature 606098..606163 FT /note="FPrintScan hit to PR01039, Tryptophanyl-tRNA FT synthetase signature" FT misc_feature 606257..606289 FT /note="FPrintScan hit to PR01039, Tryptophanyl-tRNA FT synthetase signature" FT CDS 606805..607965 FT /transl_table=11 FT /locus_tag="DIP0636" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3439 TR:AAK47783 FT (EMBL:AE007151) (289 aa) fasta scores: E(): 1.6e-33, 33.91% FT id in 286 aa" FT /protein_id="CAE49153.1" FT /translation="MASRGSGKISANTVVPASSRAAHQRESIRAMSTRQNRNKTDEFGI FT ERSTADDPGIVDKLRLKWGWFDHLMRMNERYSQEGGNQYSAGITYFSVLSMFPILMLVM FT AAAATILARQPETLQQLQERITDSVDASIADTLKEILDTAISQRGAMFGIGGLTALWSG FT LSWMSHLRYGASKMWRYPVTGDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQ FT LIDAIGLADVPGIFLLTFVISLVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAV FT LFEIFKQLASQFFSNALSNPAGATFGPIIGLMVLLYFVWRILMYCCAWAATTAESLAIA FT KLEPPAPAVIRVREEIRTGGDKGKGIGIGIAGAAAATALLSLWKRK" FT misc_feature order(607072..607140,607258..607326,607387..607455, FT 607513..607581,607708..607776,607900..607953) FT /note="6 probable transmembrane helices predicted for FT DIP0636 by TMHMM2.0" FT stem_loop complement(608011..608063) FT /note="Score 65: 23/24 (95%) matches, 0 gap" FT CDS complement(608070..609302) FT /transl_table=11 FT /locus_tag="DIP0637" FT /product="Putative peptidoglycan synthesis related protein" FT /note="Similar to Mycobacterium leprae putative FT D-alanyl-D-alanine carboxypeptidase ML0691 TR:Q9CCM2 FT (EMBL:AL583919) (411 aa) fasta scores: E(): 6.2e-45, 40.1% FT id in 389 aa, and to Bacillus subtilis penicillin-binding FT protein 5* precursor DacB SW:DACB_BACSU (P35150) (382 aa) FT fasta scores: E(): 2e-13, 30.26% id in 261 aa" FT /protein_id="CAE49154.1" FT /translation="MKRVPKTLIALTAITATLSPTALSATMAPVLADPAPRSSAPNTDK FT CDNATTPPSAETTSEKLAPGRTSIAPLPTVDNEFGSCGITKATGFDVPTNTASAWMVFD FT LDTGAVIATKDPHGRYRPASVIKALIALVAIDELDLSKKVTITNDDVNQEGSAVGFVEG FT IDYSVQQLLDGLLLGSGNDAASALARALGGEDTTIKKINDLAQELGTVDTYAASYTGLD FT AQGMSTSVRDLAVIYQAAWQNPVFADTVKKEYSELPADKTGTTFQVWNDNGILMNTEHG FT IGGKTGFTDDAHHTFVGAKNINGRRIAAVILDTTIDLGRPWEQANKLIDAGYKVAENQA FT VGSILRKESSIPSEESQPKELSRPSFTNPSDNRDTTPRFVILGALVALVVLGALAWMFG FT KREDREDRVDR" FT misc_feature complement(608109..608165) FT /note="1 probable transmembrane helix predicted for DIP0637 FT by TMHMM2.0" FT stem_loop complement(608235..608275) FT /note="Putative intragenic stem-loop structure. Score 60: FT 20/20 (100%) matches, 0 gaps" FT misc_feature complement(608289..609050) FT /note="HMMPfam hit to PF00768, D-alanyl-D-alanine FT carboxypeptidase" FT misc_feature complement(608673..608714) FT /note="FPrintScan hit to PR00725, D-Ala-D-Ala FT carboxypeptidase 1 (S11) family signature" FT misc_feature complement(608739..608792) FT /note="FPrintScan hit to PR00725, D-Ala-D-Ala FT carboxypeptidase 1 (S11) family signature" FT misc_feature complement(608901..608936) FT /note="FPrintScan hit to PR00725, D-Ala-D-Ala FT carboxypeptidase 1 (S11) family signature" FT misc_feature complement(609207..609302) FT /note="Signal peptide predicted for DIP0637 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.888 between residues 32 and 33" FT CDS 609337..610281 FT /transl_table=11 FT /locus_tag="DIP0638" FT /product="Conserved hypothetical protein" FT /note="Low similarity to C-terminal region of Streptomyces FT coelicolor putative adenosine deaminase SC5H1.24c TR:Q9X7T2 FT (EMBL:AL049863) (359 aa) fasta scores: E(): 2.1e-06, 28.88% FT id in 225 aa" FT /protein_id="CAE49155.1" FT /translation="MYDTPIFRSEFKVISHELIHALPKVILGESGDAAYMQSRVQQLAD FT DHVAYFECTVPHEDIERAISVAEQAPFTVGILERIDDSSHYTDRSRTPVVVGFSTQSAD FT VAAILRENYVPFEFDGSVADQVRVGASRIIHGIGLFEDFRFEDDDIVPGRLSAWVRDRD FT YPVLVEPFADLENGEVAELADHPLPLMSKLGYRTASSILSTDRLLELTEYLELQIEDLF FT ELTRDAVAVSLLPQPLRVQLWEELVFPFFEQLGEDFADHSTTDDAESTTELRSEREHAG FT HAHTDHHGGAAGLEGVDPQFLDEMGIEFDDLDL" FT misc_feature 609373..609402 FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT CDS complement(610555..611787) FT /transl_table=11 FT /locus_tag="DIP0639" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 45.7 kDa protein Rv3311 or MTV016.10 TR:O53362 FT (EMBL:AL021841) (420 aa) fasta scores: E(): 1.4e-25, 34.05% FT id in 417 aa" FT /protein_id="CAE49156.1" FT /translation="MANKGIVPVKISLTEGDFYTLWAPQWREHGAEWQAFLGSGDDLYV FT FESPAAVLAYIESGARHDLSDHPKWGAFMAGADDRVVPTDRQEYDLIGVPALLAERPSH FT TNVSAVARCFAITRSLGDVTATIPVQSFFSSHSILMNTERGGNHFTGDSGLGEWTGIGR FT IVLTSWNNVIDALDSAITVHTDGNAEAISAAAARIDAATAEAEQRRIAEEKKKKADAEK FT VDPYDATPWAAAGIDPIKISIDGRTVYTLRTYIEAQPVFLGKYGEIFTFNSGKSLVRWL FT VEHDDHDLARVSTWEDLMVPVNAGELDITVHPDNVYSFNGLTRDINTSVEAVDTAQMAR FT AYELLADAADWAADDSLNSYFLTNPRMQDYISYMIGSTRVSGYTPTPPFTEHSESWAEM FT EKMLTKRFSKF" FT CDS complement(611808..612647) FT /transl_table=11 FT /locus_tag="DIP0640" FT /product="Conserved hypothetical protein" FT /note="C-terminal region similar to C-terminal region of FT Mycobacterium leprae putative secreted protein ML0885 or FT MLCB268.32c TR:O69580 (EMBL:AL022602) (374 aa) fasta FT scores: E(): 4.6e-12, 37.57% id in 173 aa" FT /protein_id="CAE49157.1" FT /translation="MINLPGVVSMLATLAPPQLNLAIPETPSFPTADLITHAFGTTTPL FT IHAAQTLAADAHRARSVIPQALHEIDNLRAELGHMATDFLSEATRIFPKLFSPLPGSAL FT AAHAELAALPGKYIDLAFARLDLANKNLTHATMTLLSVADRGVDTRGELPPPAAPPATP FT PASHLGQRAVDAAMSALGTPYLWGGTTLAGFDCSGFTQWAWRQAGIELPRLAEHQNVGT FT PVARENLQPGDLLVWDGHVAMYAGNGNIIEAGNPVALNPIRTTNMGMPFKGYFRPTG" FT misc_feature complement(611817..612122) FT /note="HMMPfam hit to PF00877, NLP/P60 family" FT CDS complement(612644..612925) FT /transl_table=11 FT /locus_tag="DIP0641" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49158.1" FT /translation="MDSHITIDVPLMHQWLRTLIDEATHPPSEHHDIASDCAGVGDFLS FT AYNRCVASLTTRATEHCHQAEELAATAHQLLQNAEDIDADTARREDTL" FT CDS 612990..613625 FT /transl_table=11 FT /gene="upp" FT /locus_tag="DIP0642" FT /product="uracil phosphoribosyltransferase" FT /EC_number="2.4.2.9" FT /note="Similar to Mycobacterium tuberculosis uracil FT phosphoribosyltransferase Upp or Rv3309c or MT3408 or FT MTV016.08c SW:UPP_MYCTU (P94928) (207 aa) fasta scores: FT E(): 4e-47, 59.9% id in 207 aa, and to Lactobacillus FT plantarum uracil phosphoribosyltransferase Upp SW:UPP_LACPL FT (Q9RE01) (209 aa) fasta scores: E(): 6.3e-34, 48.3% id in FT 207 aa" FT /protein_id="CAE49159.1" FT /translation="MEIRIVDHPLAASRLTIMRDKRTNNAGFRAALADLGAMLVYEASR FT DLAIEQFPVSTPVADTQGTRLQDPPIIVPIIRAGLGMVDPALSMIPDAQVGFIGMARDE FT ATHQPVPYLEALPDDLSGRTVFCVDPMLATGGSLLHAIKLLADRGATDITAICMVSAQE FT GVDALAESGLPCRLVTATIDPELNDDAYIVPGLGDAGDRLYGPRNIDL" FT misc_feature 613065..613529 FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain" FT CDS 613790..614371 FT /transl_table=11 FT /locus_tag="DIP0643" FT /product="Putative DNA-binding protein" FT /note="No significant database matches" FT /protein_id="CAE49160.1" FT /translation="MSTVLGTFKRMNEGWTQWPSYGHAFGVRLHKLRRLRGLTQDGLAE FT IANLSRNQISNLERNENSATKSSDPTMSTIYRLARALHVPPAALMPAVGDYVTDICQDT FT GHELPIDIAWPTSSQDTQKFSIQYRYRYWDEQSPLFDDEDWDDDHADDPDFGIAVMPET FT SDNNDADTTKGGDDTEDRGDVDKRDDDPLA" FT misc_feature 613871..614056 FT /note="HMMSmart hit to SM00530, Helix-turn-helix XRE-family FT like proteins, DNA-binding" FT misc_feature 613874..614056 FT /note="HMMPfam hit to PF01381, Helix-turn-helix" FT misc_feature 613901..613966 FT /note="Predicted helix-turn-helix motif with score 1855 FT (+5.50 SD) at aa 38-59, sequence LTQDGLAEIANLSRNQISNLER" FT misc_feature 614210..614359 FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT CDS 614468..615658 FT /transl_table=11 FT /locus_tag="DIP0644" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hydrolase, Ama/HipO/HyuC family MT3404 TR:AAK47747 FT (EMBL:AE007149) (389 aa) fasta scores: E(): 4.5e-74, 49.74% FT id in 388 aa" FT /protein_id="CAE49161.1" FT /translation="MAQSVAEHVTQWAEQHRDEVIEWRRHFHRHPELSHMEFATTDFIE FT ATLRRYGLNPQRFPNTGLMVDIGPDTPQKIAFRGDIDALPITENDDHDVISENYGVMHA FT CGHDVHITVALATACALASADLTIGVRVIFQPAEEVMEGGAPEVIEFGALKGVSNIFAI FT HAEPKLAVGKVGVRAGAITSASDVIEIKVFGSGGHTSRPHLTADVVYALSKLVVDLPGL FT LSRRVDPRTGTVLVFGMINAGYAPNAITEEGSVKGTIRTADIGVWRMMEGLLAELVPQV FT LAPTGCTYELIHHKGVPPVLNDDVATAVIADAARTINPSTVVEAPQSSGGEDFSWYLEH FT VPGSMARLGCWNGEGTPGDLHQADMYADERCLEVGVRLFGAVADRYNSHNAMFIED" FT misc_feature 614516..615454 FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40" FT CDS 615701..617173 FT /transl_table=11 FT /gene="lpdA" FT /locus_tag="DIP0645" FT /product="Dihydrolipoamide dehydrogenase" FT /note="Similar to Mycobacterium tuberculosis FT dihydrolipoamide dehydrogenase LpdA or Rv3303c or FT MTV016.02c TR:O53355 (EMBL:AL021841) (493 aa) fasta scores: FT E(): 5.8e-110, 64.04% id in 470 aa, and to Bacillus FT subtilis dihydrolipoamide dehydrogenase PdhD or AceD or FT CitL SW:DLD1_BACSU (P21880) (470 aa) fasta scores: E(): FT 1.2e-36, 31.47% id in 467 aa" FT /protein_id="CAE49162.1" FT /translation="MGCLRYTWALDSSNRHTHTGGTVTRIVIIGGGPAGYEAALAGAKY FT GAEITIIEDRGLGGAAVINDCVPSKSFIAGANIKTDLRRADDMGLNKGIGEAHLLIDAL FT NNRVQALAYEQSSDIRASMDAHGVRVIDGRGSFDDYNPKQTVHYIKVDRADGTTETIEC FT DLVLIATGATPRILPDAQPDGERILTWRQIYGLTELPEHLIVVGSGVTGAEFVSAFAEL FT GVKVTMVASRDRILPHDDADAADVLETVLAERGVALEKHARVDSVIRTEDGGVCVKTSD FT GREIFGSHALMTVGSVPNTKDLGLEKIGIATTRSGHICVDRVSRTNVAGVYAGGDCTDL FT FPLASVAAMQGRIAMYHALGEGVKPIRMKTVATAVFTRPEIAAVGVTQKQIESGEVIAR FT TVMLPLQTNPRAKMRSLRHGFVKMFCRKNSGIVIGGVVVAPTASELILPIAVAVTNQLT FT VSDLAESFAVYPSLSGSITEAARQLVQHDDLQ" FT misc_feature 615773..615841 FT /note="FPrintScan hit to PR00469, Pyridine nucleotide FT disulphide reductase class-II signature" FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 615773..616738 FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase" FT misc_feature 615776..615865 FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature 615803..615859 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 615869..615916 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 616166..616450 FT /note="HMMPfam hit to PF02780, Transketolase, C-terminal FT domain" FT misc_feature 616196..616225 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 616199..616252 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 616304..616357 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 616304..616381 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 616307..616402 FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature 616364..616411 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 616562..616606 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 616676..616732 FT /note="FPrintScan hit to PR00469, Pyridine nucleotide FT disulphide reductase class-II signature" FT misc_feature 616691..616714 FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 616799..616864 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 616811..617140 FT /note="HMMPfam hit to PF02852, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain" FT misc_feature 616907..616969 FT /note="FPrintScan hit to PR00945, Mercuric reductase class FT II signature" FT misc_feature 616994..617041 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature 617060..617122 FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT CDS 617693..621118 FT /transl_table=11 FT /gene="pyc" FT /locus_tag="DIP0646" FT /product="pyruvate carboxylase" FT /note="Similar to Corynebacterium glutamicum pyruvate FT carboxylase Pyc TR:O54587 (EMBL:AF038548) (1140 aa) fasta FT scores: E(): 0, 80.58% id in 1138 aa, and to the N-terminal FT region of Methanococcus jannaschii pyruvate carboxylase FT subunit A PycA or MJ1229 SW:PYCA_METJA (Q58626) (501 aa) FT fasta scores: E(): 6.2e-71, 48.19% id in 444 aa" FT /protein_id="CAE49163.1" FT /translation="MSQQSSERGTSTVNPLSKILVANRGEIAVRAFRAAFETGAATVAV FT YPNEDRNSFHRSFASEAVLIGEGGSAVKAYLDIDEIIRAAKQTGADAIYPGYGFLSENA FT QLARECAENGITFIGPPPSVLELTGDKAAAVTAAREAGLPTLTETEATDDPKKLAELTK FT GQTYPLFVKAVAGGGGRGMRFVDAPENLEKLAAEASREAAAAFGDGRVYAERAVINPQH FT IEVQILGDSAGNIIHLYERDCSLQRRHQKVVEIAPAQHLAPGLREKICADAVAFARHIG FT YQGAGTVEFLVDEEGNHVFIEMNPRIQVEHTVTEEVTQVDLVKSQIMIASGATLEDLGL FT RQEDIHTEGAALQCRITTEDPNNGFRPDTGTITAYRSPGGAGVRLDGAAMLGGEITPNF FT DSMLVKMTCRGADFATAVARAQRALAEFVVSGVATNIGFLRALLREEDFQHKRIATGFI FT ADHPWLLQAPPADDEPGRILNYLADVTVNKPHGLRPAVINPVEKLPAEIKGELPRGSRD FT RLLQLGPEGFARALRKQDALAVTDTTFRDAHQSLLATRVRSNTLIDAARHVAKLTPELL FT SVEAWGGATYDVAMRFLHEDPWERLDHLREAMPNVNIQMLLRGRNTVGYTPYPDSVCKA FT FVDEAARSGVDIFRIFDALNDVSQMRPAIDAVLETNTTIAEVAMAYSGDLTNPSEKLYT FT LDYYLKLAEEIVKSGAHVLAIKDMAGLMKPAAATKLVTELRRNFDLPVHVHTHDTAGGQ FT LATYWAAAAAGADAVDGASAPLSGTTSQPSLSAIVAAFANTYRDTGLSLDAVGSMEPYW FT EAVRKLYAPFESGTPGPTGRVYQHEIPGGQLSNLRAQATALGLADRFELIEDYYAAVNE FT MLGRPTKVTPSSKVVGDLALYLVGAGVNPADFAADPQKYDIPDSVIAFLRGELGTPPGG FT WPEELRAKALAGRKESKDTLAPLPAEDEALLADRATVRPTLDRLLFPKPAAEFAEHRRQ FT FGDTTKLGDAEFLYGLKEGKETVIRTADSSVPMLVRLDAVGEPDEKGMRNVVCNVNGQI FT RPILVRDRSVESVTASVEKADPSNAGHVAAPFAGVVTVTIEEGATVKAGDPVAVIEAMK FT MEATISATTDGTVDRIVLTQATKVEGGDLLLVIK" FT misc_feature 617735..618076 FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain, N-terminal domain" FT misc_feature 618080..618730 FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain, ATP binding domain" FT misc_feature 618590..618613 FT /note="ScanRegExp hit to PS00867, Carbamoyl-phosphate FT synthase subdomain signature 2." FT misc_feature 618749..619069 FT /note="HMMPfam hit to PF02785, Biotin carboxylase FT C-terminal domain" FT misc_feature 619319..620176 FT /note="HMMPfam hit to PF00682, HMGL-like" FT misc_feature 620189..620788 FT /note="HMMPfam hit to PF02436, Conserved carboxylase FT domain" FT misc_feature 620912..621112 FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme" FT misc_feature 620981..621034 FT /note="ScanRegExp hit to PS00188, Biotin-requiring enzymes FT attachment site." FT CDS complement(621208..621972) FT /transl_table=11 FT /locus_tag="DIP0647" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptococcus pyogenes hypothetical FT protein SPY1216 TR:Q99ZI6 (EMBL:AE006562) (270 aa) fasta FT scores: E(): 3.2e-07, 33.82% id in 136 aa" FT /protein_id="CAE49164.1" FT /translation="MTNSPTDAQLTAARNFLHALEADDPRNAVVVSEGIDDSFQHTLSS FT IAAMVNMRDPRAASQELQKAQSAFLKATTPAATVVVGDITELPFSAMVVPATQTLIGPT FT SPSISDLAARIHQRAGFGLRLECARLLKESHEHIEVGSAYVTSGFLLPTPWIIHIVTPQ FT LNLAARGESIELLRQCFQNIFATAAGRDWKELTIPSQLTGPLGFPAGMEAQILSEELAA FT ARKTGFSAHVVIVCDSETAAGAYRRTFAPVTD" FT misc_feature complement(621322..621642) FT /note="HMMPfam hit to PF01661, Appr-1''-p processing enzyme FT family" FT CDS complement(621987..622391) FT /transl_table=11 FT /locus_tag="DIP0648" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49165.1" FT /translation="MFEKSFTLCDMEPTEINGGRFYARPLHNDERIDDSPALQLVDAHL FT TVDEARTAWNHDTIYTWAVCEQTNVEMIALAALHITETATVLDIAPVGDPNRKLPNDPV FT LTPKTVGDAVTEIRGPITRWCTAHGINISN" FT CDS complement(622563..624347) FT /transl_table=11 FT /gene="accBC" FT /locus_tag="DIP0649" FT /product="acyl coenzyme A carboxylase" FT /note="Similar to Corynebacterium glutamicum acyl coenzyme FT A carboxylase AccBC TR:P71122 (EMBL:U35023) (591 aa) fasta FT scores: E(): 1.5e-188, 85.47% id in 592 aa, and to FT Mycobacterium leprae acetyl-/propionyl-coenzyme A FT carboxylase alpha chain [includes: biotin carboxylase (EC FT 6.3.4.14); biotin carboxyl carrier protein(BCCP)] BccA or FT ML0726 or B1308_C1_129 SW:BCCA_MYCLE (P46392) (598 aa) FT fasta scores: E(): 1.1e-159, 72.46% id in 592 aa" FT /protein_id="CAE49166.1" FT /translation="MSVEQKKITKVLIANRGEIAVRVIRAARDAGIASVAVYAEPDADA FT PFVSMADEAFALGGQTSAESYLVFDKILDAAKKSGADAIHPGYGFLSENGDFAEAVINA FT GLIWIGPSPQSIRDLGDKVTARHIALKAEAPMAPGTKEPVKDASEVVAFAEEHGLPIAI FT KAAFGGGGRGMKVAYTMDEVADLYESATREAVAAFGRGECFVERYLDKARHVECQVIAD FT MHGNVVVAGTRDCSLQRRFQKLVEEAPAPFLTDDQRTRLHESAKAICKEAGYYGAGTVE FT YLVGSDGLISFLEVNTRLQVEHPVTEVTTGLDLVREQFRIAEGKELHIKQDPTPRGHAF FT EFRINGEDAGSNFMPAPGKVTKYIEPSGPGVRMDSGIVEGSVIGGQFDSMLAKLIVFGE FT TRDEALQRASRALNEYVVEGMPTVLPFHRHIVENPAFIGDGEKFEVYTKWIEEEWNNPI FT EPYVDPTDVDDEEAALPSQKVVVEIDGRRVEIALPGDLALGGGAGAPKKKAKKRRAGGS FT KAAISGDAVAAPMQGTVIKINAEEGAEVAEGDTVVVLEAMKMENPVKAHKSGVVTGLAI FT AAGEGVTKGQVLLEIKDA" FT misc_feature complement(622575..622778) FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme" FT misc_feature complement(622653..622706) FT /note="ScanRegExp hit to PS00188, Biotin-requiring enzymes FT attachment site." FT misc_feature complement(622995..623327) FT /note="HMMPfam hit to PF02785, Biotin carboxylase FT C-terminal domain" FT misc_feature complement(623166..623222) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(623349..623987) FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain, ATP binding domain" FT misc_feature complement(623385..623474) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(623451..623474) FT /note="ScanRegExp hit to PS00867, Carbamoyl-phosphate FT synthase subdomain signature 2." FT misc_feature complement(623682..623741) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(623823..623861) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(623991..624329) FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain, N-terminal domain" FT CDS complement(624604..625485) FT /transl_table=11 FT /gene="sseA" FT /locus_tag="DIP0650" FT /product="Putative thiosulfate sulfurtransferase" FT /EC_number="2.8.1.1" FT /note="Similar to Mycobacterium tuberculosis putative FT thiosulfate sulfurtransferase SseA or Rv3283 or MT3382 or FT MTCY71.23 SW:THT2_MYCTU (P96888) (297 aa) fasta scores: FT E(): 1.5e-78, 60.67% id in 295 aa, and to Corynebacterium FT glutamicum thiosulfate sulfurtransferase ThtR SW:THTR_CORGL FT (P71121) (225 aa) fasta scores: E(): 1.2e-56, 63.72% id in FT 215 aa" FT /protein_id="CAE49167.1" FT /translation="MPAPFDPHPQFQEYAHPEKLVSASWLSARLGTKGLRVVESDEDSL FT LYDIGHIPGAVRIDWAKDLNDATIRDYISAKDFAALMDAKGIARDDTVVIYGDKSNWWA FT TFTLWIFELFGHEDVRILNGGRDAWMAEERDTSYAVPEYPATGYPVVTDTSAPARIFVD FT ELVSKLGTQQLIDVRSESEYAGTTDNDYPSSGVLRSGHIPTAVNIPWNKSVHPNSRFRS FT FSELSEIYGGLDKNAETVTYCQVGDRAAHTWFVLKYLLGHDIARTYDGSWAEWGNMIRM FT PIAKGEEPGVAP" FT misc_feature complement(624643..625014) FT /note="HMMSmart hit to SM00450, Rhodanese Homology Domain" FT misc_feature complement(624652..625005) FT /note="HMMPfam hit to PF00581, Rhodanese-like domain" FT misc_feature complement(624661..624693) FT /note="ScanRegExp hit to PS00683, Rhodanese C-terminal FT signature." FT misc_feature complement(624661..624975) FT /note="ProfileScan hit to PS50206, Rhodanese/cdc25 fold." FT misc_feature complement(625078..625386) FT /note="ProfileScan hit to PS50206, Rhodanese/cdc25 fold." FT misc_feature complement(625081..625425) FT /note="HMMSmart hit to SM00450, Rhodanese Homology Domain" FT misc_feature complement(625090..625422) FT /note="HMMPfam hit to PF00581, Rhodanese-like domain" FT misc_feature complement(625312..625347) FT /note="ScanRegExp hit to PS00380, Rhodanese signature 1." FT CDS 626082..627140 FT /transl_table=11 FT /locus_tag="DIP0651" FT /product="Conserved hypothetical protein" FT /note="Similar to Campylobacter jejuni hypothetical protein FT CJ0069 TR:Q9PJ50 (EMBL:AL139074) (343 aa) fasta scores: FT E(): 3e-85, 61.36% id in 352 aa" FT /protein_id="CAE49168.1" FT /translation="MHKSIAVFEVEGGNDKQFNGHRKDTLPIVDAIKEKGWHAEVVFYR FT PEWSEGLFEYVSQNFDGYISRVNPGNIPGGEKGYFDLLTKLSEAGLVGMSTPAEMMAYG FT AKDALVKLNDTDLVPSDTAAYYDVETFHNTFPTSLSYGERVLKQNRGSTGSGIWRVQLE FT DKELAASVAPGTALPLNTKLRCTEAVDNHTEIRELGEFMDFCDQYIVGDNGMLVDMRFM FT PRIVEGEIRILMVGPHPVFVVHKKPAAGGDNFSATLFSGAKYTYDKPEAWQELVDMFAA FT ARPVIAEKLGGDNIPLIWTADFMLADGENGEDTYVLGEINCSCVGFTSELDMGIQELVA FT QEAVERVEKKHA" FT CDS 627335..629452 FT /transl_table=11 FT /locus_tag="DIP0652" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae conserved membrane FT protein ML1213 TR:Q9CC68 (EMBL:AL583921) (733 aa) fasta FT scores: E(): 1.2e-78, 38.27% id in 708 aa" FT /protein_id="CAE49169.1" FT /translation="MPQPKTQQSSRPSTTKYRYDLDGLRGIAIAFVVIFHVFVGRVSGG FT VDVFLLLSGYFFLGSQLRYAAKPNASLNPWWPLWRTIRRLLPALMVVLMSTVLIIESAI FT PELRTTNVADQALASVGYYQNWELSAQGSAYGAASSVVSPLQHLWSMSVQGQFYLAAIA FT FALFVSVVLKLRRRRGHEAERVRHLAGIPLIAVTVASFSYAVYLHPVDQPLNYYSTWSR FT VWELTLGAVLVLYSDKIRVSRAMGVVFTYLGLAMVLTTGLLFDGAQVFPGPGALYPLGG FT AALVILGQGHGAGWMKSRFMLWLGSIAYPLYLWHWPLLIMSTIYLGLDRPSTGLGISVI FT AVSVVLAHLTHKLIEEPFKQHAKRPERQARRVRSAAATLRKATGATRALAGVVVLALCG FT TALWIPSVWQKEVQALSKTQLDPVLYPGAMALVGGRVPQVKFAPDPYVLANSLSPAWTD FT GCMSELDDDPTKIANDNFGEEYCVYGDKNAKKVAYVIGGSHAEQWMAALDQIGRDHGLK FT IIPIVRQGCPAFAMEEDGVFSDDCATFNKVMLEKVRRDKPDLVISNSTRPLLEKLRGLD FT EVPESYRTLWVVLEKEKIPFIGLRDNPWFLDKDGQAWPLSQCIASGGSITECGKPREEI FT YSPVDPAARFLKSKTMISIDTADWFCPNGFCPGVIGNIYVYRDGNHISDAYALSLVPLL FT WEKMEPVVSQL" FT misc_feature order(627395..627454,627467..627526,627587..627646, FT 627791..627850,627887..627955,627983..628039, FT 628073..628126,628154..628222,628241..628309, FT 628337..628396,628496..628555) FT /note="11 probable transmembrane helices predicted for FT DIP0652 by TMHMM2.0" FT CDS complement(629449..629877) FT /transl_table=11 FT /locus_tag="DIP0653" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 14.5 FT kDa protein ML0284 or MLCB4.27c TR:O69598 (EMBL:AL023514) FT (137 aa) fasta scores: E(): 3.5e-22, 50% id in 140 aa" FT /protein_id="CAE49170.1" FT /translation="MTAFNDMLAPPPVQLPQDPALDGMDLEAVTATTALEHPESPSVWA FT QLAHKALATAHSDEQRAIAYAYARTAYHRSLDRLRANGWKGWGPVPFAHEPNQGVLRAI FT AALALASQKIGDTAEYERCRQMLLDADQSCVDTLLPPA" FT CDS complement(629879..630475) FT /transl_table=11 FT /locus_tag="DIP0654" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SCK13.15c TR:Q9EWV6 (EMBL:AL512667) FT (206 aa) fasta scores: E(): 1.4e-25, 46.7% id in 197 aa" FT /protein_id="CAE49171.1" FT /translation="MNIVLASSSPSRLSILRSAGVEPLVCPADVDEDALLDSLVGRSPA FT DKVAALAQAKAEAIAGDYPDDVVIGGDSMLLLDGALQGKPHTVDKTIERWKQQRGKTAE FT LITGHCVITPRGRHVETSTTTVTFAHADDADIEAYARTGEPLQCAGAFTLEAIGGWFID FT SITGDPSSVIGLSLPVVRRALYAAGYNVSEFWNNN" FT misc_feature complement(629891..630475) FT /note="HMMPfam hit to PF02545, Maf-like protein" FT CDS complement(630494..631399) FT /transl_table=11 FT /locus_tag="DIP0655" FT /product="Putative ribokinase" FT /note="Similar to Streptomyces coelicolor carbohydrate FT kinase SCC57A.19 TR:Q9RDH9 (EMBL:AL136519) (306 aa) fasta FT scores: E(): 1.3e-32, 44.06% id in 295 aa, and to FT Escherichia coli ribokinase RbsK or B3752 or Z5253 or FT ECS4694 SW:RBSK_ECOLI (P05054) (309 aa) fasta scores: E(): FT 4.3e-24, 35.69% id in 297 aa" FT /protein_id="CAE49172.1" FT /translation="MSSSMTVVGSINADVSIQVARHPSPGETVLGHDSTISPGGKGANQ FT AVAAALQGASVSFVGAVGNDTYADHALKILRSSGVNLDAVETIDDNTGVAYIQVSDDGE FT NSIIVIPGANAHVTADYVEHHRKPIEDADIVLLQGEIPADGFSAAVQAARGTVVVNLAP FT VIDVDRDCLLRADPLMANEHEAALILEQLGVPVTSEDPRVLIEALRSQGFASVVLTLGG FT HGALVADASGVTPIATPYVTAVDTTGAGDAFAGAFVARRLQGDSLIDAATFAARVGAFS FT VQGRGAQTSYPSESDTLPAV" FT misc_feature complement(630518..631396) FT /note="HMMPfam hit to PF00294, pfkB family carbohydrate FT kinase" FT misc_feature complement(630626..630667) FT /note="ScanRegExp hit to PS00584, pfkB family of FT carbohydrate kinases signature 2." FT misc_feature complement(630719..630754) FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature complement(630845..630892) FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature complement(631046..631087) FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature complement(631211..631285) FT /note="ScanRegExp hit to PS00583, pfkB family of FT carbohydrate kinases signature 1." FT misc_feature complement(631241..631300) FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature complement(631316..631381) FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT CDS complement(631544..632599) FT /transl_table=11 FT /locus_tag="DIP0656" FT /product="Putative transcriptional regulatory protein" FT /note="Similar to Streptomyces coelicolor probable FT lacI-family transcriptional regulator SCC57A.16 TR:Q9RDI2 FT (EMBL:AL136519) (347 aa) fasta scores: E(): 5.5e-32, 34.04% FT id in 326 aa, and to Bacillus megaterium glucose-resistance FT amylase regulator CcpA SW:CCPA_BACME (P46828) (332 aa) FT fasta scores: E(): 5.1e-24, 29.17% id in 329 aa" FT /protein_id="CAE49173.1" FT /translation="MSDISQPTVENEEKSPTWRRRRQSITLKDIAADTGLSISTVSRAL FT ARNPVIPESTRSIVEEAAGRLNYRPNAQAKALRSQKSNTIGIVLPNIRNPYFNQLASAI FT QEAASLKGYCCMMANSAESPELINSALDILNSQQVDGIIVVPHIQSAQQITAITEQGTP FT IVAADRTVTHSAVPSVTSDPLPAMKEALRMLSLNPGASIGYLAGPQDTSTGRERLEAIT FT SIKSELGIPSPDVYFGGYSSEAGFAGTHELLDRGVNSILTGDMMMTVGAIQAIYARGLR FT IGKDVALIGYDNTPAFLLQEQPITTIDQQVDDMGQRAFDMLYSHMNNGERATSCVIPTT FT LALRASHSLAV" FT misc_feature complement(631565..632356) FT /note="HMMPfam hit to PF00532, Periplasmic binding proteins FT and sugar binding domain of the LacI family." FT misc_feature complement(632318..632530) FT /note="HMMSmart hit to SM00354, helix_turn _helix lactose FT operon repressor, DNA-binding" FT misc_feature complement(632462..632527) FT /note="Predicted helix-turn-helix motif with score 1943 FT (+5.80 SD) at aa 25-46, sequence ITLKDIAADTGLSISTVSRALA" FT CDS complement(632991..633251) FT /transl_table=11 FT /locus_tag="DIP0657" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49174.1" FT /translation="MSDSVSDAQAQSTPEGAQQKPILRVVKGNPDPTQVATLTALFASM FT ADNAAQQSKQERERNLWGNVEERLQRPTTYNPTAFRNVSFF" FT CDS complement(633347..634978) FT /transl_table=11 FT /gene="pccB1" FT /locus_tag="DIP0658" FT /product="Propionyl CoA carboxylase beta chain 1" FT /note="Similar to Corynebacterium glutamicum DtsR2 protein FT TR:O87201 (EMBL:AB018531) (537 aa) fasta scores: E(): FT 2e-182, 87.87% id in 536 aa, and to Saccharopolyspora FT erythraea propionyl-CoA carboxylase beta chain PccB FT SW:PCCB_SACER (P53003) (546 aa) fasta scores: E(): FT 5.2e-137, 64.83% id in 546 aa. Possible duplication of FT DIP0660 (69.309% identity in 492 aa overlap)" FT /protein_id="CAE49175.1" FT /translation="MTAATINDTGAQTPDLTTTAGKLADLRARIAETQAPMGPASIEKV FT HAKGKKTARERIEYLLDEGSFVEIDALARHRSKNFGLDAKRPVTDGVVTGYGTIDGRKV FT CVFSQDGAVFGGALGEVYGEKIVKIMDLAIKTGVPLIGINEGAGARIQEGVVSLGLYSK FT IFYRNTLASGVIPQISLIMGACAGGHVYSPALTDFIIMVDKTSKMFITGPDVIKTVTGE FT EVTQEELGGAHTHMATSGTSHYTASDDADALDWVRDLVGFLPSNNRAEAPREPAEIMVG FT SIKENITDSDLELDTIIPDSPNQPYDMKDVITRVLDDGDFFEIQENYAGNIIVGFGRVE FT GRSVGVVANQPTEFAGCLDIKAAEKAARFIRTCDAFNVPIIEFVDVPGFLPGTSQEYDG FT IIRRGAKLLYAYSEATVGKITVITRKSYGGAYCVMGSKDMGADLVLAWPTAQIAVMGAA FT GAVGFIYRKEIKAAAAEGKDMLAVAKEYEREYEETLVNPYMAAERGYVDAVIPPSETRG FT QIIEALRLLDRKVVNVPAKKHGNIPL" FT misc_feature complement(633356..634891) FT /note="HMMPfam hit to PF01039, Carboxyl transferase domain" FT misc_feature complement(633584..633649) FT /note="1 probable transmembrane helix predicted for DIP0658 FT by TMHMM2.0" FT misc_feature complement(634490..634546) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature complement(634604..634648) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT CDS 635607..636701 FT /transl_table=11 FT /locus_tag="DIP0659" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49176.1" FT /translation="MKSVKLAVVSASTALSVIAVGTAVTGAEEAKVSACAAAENKASVS FT KENAAAAQANVDKKIIEITSADPDVIHSMRELEQVKSALEAAKWELGAAEDLNDESKPA FT GKALQAVLDRKLMNALSATSKARQSFKRAELALHQSKENRIQSEINGIGVGINSDERLE FT LENNLDKALRKMSEADEGLSEALLALTFITQDIIDDKAEVEKSQEKRHEVAGKYIVQAK FT AAIEAAKPLIEAAETYSKISVGNALEAAKQNPEVLKDEEEAKRLNDQAVLDQKAAEECA FT ADEAAKADKNQAETGKDNSTNGQGRKGVGKEKGENEDQGDGDNNQDSEGNSKFFGILAA FT VLGGLGLAGLVAYFMPMIMKFFNR" FT misc_feature 635607..635696 FT /note="Signal peptide predicted for DIP0659 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.293 between residues 30 and 31" FT misc_feature 636606..636674 FT /note="1 probable transmembrane helix predicted for DIP0659 FT by TMHMM2.0" FT stem_loop 636728..636776 FT /note="Score 56: 20/21 (95%) matches, 0 gaps" FT CDS complement(636944..638575) FT /transl_table=11 FT /gene="pccB2" FT /locus_tag="DIP0660" FT /product="propionyl-CoA carboxylase beta chain 2" FT /note="Similar to Corynebacterium glutamicum DtsR1 protein FT TR:O88155 (EMBL:AB018531) (543 aa) fasta scores: E(): FT 1.5e-173, 81.76% id in 543 aa, and to Saccharopolyspora FT erythraea propionyl-CoA carboxylase beta chain PccB FT SW:PCCB_SACER (P53003) (546 aa) fasta scores: E(): FT 2.7e-127, 59.89% id in 546 aa. Possible duplication of FT DIP0658 (69.309% identity in 492 aa overlap)" FT /protein_id="CAE49177.1" FT /translation="MTISSSFIDVDALHHPSTTAGKIADFKARRAEANTPMGETALNKV FT RGQGRMTARERLDYLLDEGSFIETDQLARHRTHDFGLYGKRPVTDGIVTGWGTIDGREV FT CIFSQDGTVFGGALGEVYGEKMIKIMELAVTTGRPLIGLYEGAGARIQDGAVSLDMIAR FT TFYHNINASGVVPQISVIMGACAGGNAYSPALTDFVLMVDQTSKMFVTGPDVIKTVTGE FT MITQEELGGASAHMAAAGNSHYTASSDEDALEFVQELVGFLPSNNRSMAPREDYDREDG FT SIDDNLTPDDLRLDHIIPDSPASPYDVRDIIESLTDDGDYLEIQADRAENVVIAFGRIE FT GESIGFVANQPTQLAGCLDIDASEKAARFIRTCDAFNIPVVMLVDVPGFLPGAGQEHNG FT ILRRGAKLLYAYGEATVPKITVTMRKAYGGAYCVMGSKGLGADVNLAWPTAQIAVMGAA FT GAVGFLHRKELAKAVENDEDVFALTQAFEQEYENHMLNPYMAAERGLIDAVILPSETRG FT HISRNLRLLRNKHVQRPARKHGNIPL" FT misc_feature complement(636953..638425) FT /note="HMMPfam hit to PF01039, Carboxyl transferase domain" FT misc_feature complement(638087..638143) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature complement(638201..638245) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT CDS 638727..639527 FT /transl_table=11 FT /locus_tag="DIP0661" FT /product="Putative biotin synthesis-related regulatory FT protein" FT /note="Similar to C-terminal region of Escherichia coli FT BirA bifunctional protein BirA or BioR or DhbB or B3973 FT SW:BIRA_ECOLI (P06709) (321 aa) fasta scores: E(): 2e-15, FT 32.12% id in 221 aa" FT /protein_id="CAE49178.1" FT /translation="MSSDSRAPLDIAWLHEQLVENGPYNRLEHTMATGSTNTDLVAAAH FT AGAPEWTAFLTEHQSQGRGRMGRKYESPVGAQLTLSVLIRPRKESVSRLGTMPLATGLA FT LVDVLGSDPRIGLKWPNDLLCDGRKLCGILAEAVSLGDHPAVVIGLGLNTALTKEELPV FT AHATSLDLEGIAYERNQLAVDVLNALYKRLNQWIAGDPSLMGDYRRVCTSIGADVRVVL FT SEDKELLGVAESVTDEGLICVRDASGELHEFMVGDVTHLRLQDK" FT misc_feature 638805..639206 FT /note="HMMPfam hit to PF03099," FT misc_feature 639363..639509 FT /note="HMMPfam hit to PF02237, Biotin protein ligase C FT terminal domain" FT CDS 639528..639992 FT /transl_table=11 FT /locus_tag="DIP0662" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49179.1" FT /translation="MAGIRLQQGEEVRVDVTAPLTRLMLPVCELLLITGLCWMGIGFLD FT KSALDPNNDPTMRNGVVLLWAVLSCWRFALPVVRARKERIIVTNQRIILRAPGLMGAKE FT SIPFHAVRYIGRKRKNISLAVAGYSRPILLPNVAKAKYVVNEIEQHIGYR" FT misc_feature order(639585..639653,639696..639752) FT /note="2 probable transmembrane helices predicted for FT DIP0662 by TMHMM2.0" FT CDS 640046..641251 FT /transl_table=11 FT /gene="purK" FT /locus_tag="DIP0663" FT /product="phosphoribosylaminoimidazole carboxylase ATPase FT subunit" FT /EC_number="4.1.1.21" FT /note="Similar to Corynebacterium ammoniagenes FT phosphoribosylaminoimidazole carboxylase ATPase subunit FT PurK SW:PURK_CORAM (Q44678) (413 aa) fasta scores: E(): FT 2.4e-91, 62.34% id in 401 aa" FT /protein_id="CAE49180.1" FT /translation="MLPVTHSNGNPAAHATNMPILCVIGDGQLARMMHTAAIELGQSVR FT ILAGAPNASAAQVAADVVLGDYTNLDDLRRVTEGAHAVTFDHEHVPNQHLEALIAEGIN FT VQPRPAALVNAQDKLVMRQRLTELGAPVPAFAAIDSVEDATAFWNTVDGAVCLKARRGG FT YDGKGVWFPDTLEELTELVSELLAAGTPLMGEHKVTLVRELSAMVARTPSGEVKGWPVV FT ESIQKDGICWFAIAPAPELSPELKEQAENVAITIATELGVTGNLAVELFETPDGIFVNE FT LAMRPHNTGHWTQDGCVTDQFEQHIRAVLDLPLGSTAPLQNYTVMANVLGAAEDPETPM FT PQRMIDVWKRYPEAKIHMYGKDHRLGRKIGHVNMAGTDAEELKTAAENAAYYLVHAEWK FT EQ" FT misc_feature 640184..640672 FT /note="HMMPfam hit to PF02222, ATP-grasp domain" FT CDS 641251..641751 FT /transl_table=11 FT /gene="purE" FT /locus_tag="DIP0664" FT /product="phosphoribosylaminoimidazole carboxylase FT catalytic subunit" FT /EC_number="4.1.1.21" FT /note="Similar to Corynebacterium ammoniagenes FT phosphoribosylaminoimidazole carboxylase catalytic subunit FT PurE SW:PUR6_CORAM (Q44679) (177 aa) fasta scores: E(): FT 1.6e-43, 86.3% id in 146 aa, and to Bacillus subtilis FT phosphoribosylaminoimidazole carboxylase catalytic subunit FT PurE SW:PUR6_BACSU (P12044) (162 aa) fasta scores: E(): FT 3.8e-31, 64.15% id in 159 aa" FT /protein_id="CAE49181.1" FT /translation="MTPLVGLIMGSDSDWPTVEPAAEVLAEFGIPFEVGVVSAHRTPEK FT MLAYAKTAHERGLKCIIACAGGAAHLPGMVAAATPLPVIGIPRALKELDGMDSLLSIVQ FT MPGGVPVATVSIGGAKNAGLLAARILGAGDPELVTKMADYQENMRQEVERKDANLKKKL FT MGE" FT misc_feature 641257..641727 FT /note="HMMPfam hit to PF00731, AIR carboxylase" FT CDS 641756..642217 FT /transl_table=11 FT /locus_tag="DIP0665" FT /product="Conserved hypothetical protein" FT /note="Similar to the C-terminal region of Lactococcus FT lactis hypothetical protein YebE TR:Q9CIF2 (EMBL:AE006277) FT (194 aa) fasta scores: E(): 2.7e-05, 36.76% id in 136 aa" FT /protein_id="CAE49182.1" FT /translation="MFRKESTILVLGSKVRGAQPGHVLRWRLEHALELSRHTTGPIVVS FT GKGEAYVMDDWLIRHGVDYRRLIVEPEATSTNENIENAHALLPDTHEWLVVTSDFHKLR FT TLAWARHLGVPIRVSSAVTKPPFRVNNFVRECFALPHSLLRIAWRRLLA" FT CDS complement(642209..643324) FT /transl_table=11 FT /gene="hypD" FT /locus_tag="DIP0666" FT /product="hydrogenase isoenzymes formation protein" FT /note="Similar to Escherichia coli hydrogenase isoenzymes FT formation protein HypD or B2729 SW:HYPD_ECOLI (P24192) (373 FT aa) fasta scores: E(): 4.1e-77, 51.73% id in 375 aa, and to FT Nostoc punctiforme HypD-like protein TR:Q9EYH5 FT (EMBL:AF325724) (392 aa) fasta scores: E(): 8.7e-94, 58.74% FT id in 366 aa" FT /protein_id="CAE49183.1" FT /translation="MKYVDEFRDPEAAKALLNRIEKDAAQLGEISLMEICGGHTHTIYR FT YGLENLLPDNIDLVHGPGCPVCVIPMGRVDDALWLASQPNVILTTFGDMMRVPGSTGSL FT LDARANGADVRFVYSPLDALKVAKDNPTKMVVFFAVGFETTAPSTAVTLEAAKRENVTN FT FAVFSNHVTIEPPLRVLVNDTKVDGFIGPGHVATIVGTDTFKFLPEEFNKPVVVAGFEP FT LDVLQTVDMLLQQFLRGTSEVGNQYARVVRPEGNTAALNLMSRVFRVRETFEWRGLGWI FT PNSGLGIADEYAQWDAEKLFDVPGRRIPDPVACECGSVLTGKIKPWQCRVFGTACTPQT FT PIGTCMVSPEGACAAYYNFGRINREEAAALR" FT misc_feature complement(642239..643300) FT /note="HMMPfam hit to PF01924, Hydrogenase formation hypA FT family" FT CDS complement(643324..643581) FT /transl_table=11 FT /gene="hypC" FT /locus_tag="DIP0667" FT /product="hydrogenase expression/formation protein HypC" FT /note="Similar to Rhodobacter capsulatus hydrogenase FT expression/formation protein HypC SW:HYPC_RHOCA (P40428) FT (96 aa) fasta scores: E(): 4.7e-09, 50% id in 82 aa, and to FT Escherichia coli hydrogenase-2 operon protein HybG or B2990 FT or Z4344 or ECS3875 SW:HYBG_ECOLI (P37185) (82 aa) fasta FT scores: E(): 8e-08, 44% id in 75 aa" FT /protein_id="CAE49184.1" FT /translation="MCLGVPAQIAEIHDSTRATVSMSGVSRMVSTDLLAETIDVGDWVL FT IHVGFALSKIDEDEAAVTLQQIKQLGGFDEELQSFESSEI" FT misc_feature complement(643351..643581) FT /note="HMMPfam hit to PF01455, HupF/HypC family" FT misc_feature complement(643372..643410) FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT misc_feature complement(643375..643581) FT /note="BlastProDom hit to PD003112, PD003112" FT misc_feature complement(643414..643464) FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT misc_feature complement(643480..643530) FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT misc_feature complement(643555..643578) FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT CDS 643639..644709 FT /transl_table=11 FT /gene="hypE" FT /locus_tag="DIP0668" FT /product="hydrogenase expression/formation protein HypE" FT /note="Similar to Rhodobacter capsulatus hydrogenase FT expression/formation protein HypE SW:HYPE_RHOCA (P26412) FT (340 aa) fasta scores: E(): 8e-46, 49.7% id in 336 aa, and FT to Escherichia coli hydrogenase isoenzymes formation FT protein HypE or B2730 SW:HYPE_ECOLI (P24193) (322 aa) fasta FT scores: E(): 5.7e-38, 43.03% id in 323 aa" FT /protein_id="CAE49185.1" FT /translation="MEPKNRLNDDEHKVNINIDRVRARPFRFTDDKVTLQHGAGGKASA FT ALVENIFYSGYGNDHLEMRGDAAVVPTDVAGGTLAFSTDSYVVNPIEFPGGSIGDLAVN FT GTVNDLAVSGAIPTMISAAFILEEGLEIATLKRIVADMHAAAETAGVHIVTGDTKVVPK FT GTCDKLYITTAGVGIIPEGRTSADPQIGDAIIVSGPIADHGMAVMMARGDLAISAPIES FT DTRSVNGQIEALYAAGVTPRWMRDATRGGLATVMNELARATGLGVALNDPLPVRDMTRA FT ACDMLGIDPMYVANEGTFVAIVPADQVDTALATIPEASCIGQIVEQPAASVVLRTGFGG FT SRMVDMLVGDPLPRIC" FT misc_feature 643726..644178 FT /note="HMMPfam hit to PF00586, AIR synthase related FT protein, N-terminal domain" FT misc_feature 644200..644643 FT /note="HMMPfam hit to PF02769, AIR synthase related FT protein, C-terminal domain" FT CDS complement(644718..646952) FT /transl_table=11 FT /locus_tag="DIP0669" FT /product="Putative hydrogenase maturation protein" FT /note="Similar to Azotobacter chroococcum MCD 1 hydrogenase FT maturation protein HypF or HupY SW:HYPF_AZOCH (Q43950) (776 FT aa) fasta scores: E(): 2.5e-73, 37.62% id in 784 aa, and to FT Escherichia coli hydrogenase maturation protein HypF or FT HydA or B2712 SW:HYPF_ECOLI (P30131) (750 aa) fasta scores: FT E(): 1e-43, 38.82% id in 765 aa" FT /protein_id="CAE49186.1" FT /translation="MLRTRYLLRGVVQGVGFRPHVAAVAARHRITGLCGNNDLEVFVEA FT QALSEDILDAFISDVLATLPPLAHVVTVTQSSCPPISHETDFRIVASEHLPGARTLIPP FT DVATCPDCLADMADPNNRRYRYPFTTCTHCGPRLSIIEDLPYDRPLTTMKHFPMCPQCA FT KEYSDPHDRRYHAQPISCPDCGPSLWVEATETPGRPPLRLRVDDPIAYCRDAISKGKIV FT AVKGLGGFHLMCDATNDEAVRTLRERKHRPTKPLAVMIPDVEKARELARLDADTTAVLT FT DPAHPIVLVPTTSKQRLKLSLLIAPGLDYVGLVLPYTPLHTLLVDSPVVATSANNSGEP FT LCWDNDVARENLTHLADVFLMHDRPIHIPVEDSVVVPSAHGIVPIRRSRGFAPLPLTIP FT TFAEAGQPALSTLAVGGELKNTFTLAHEDYAHISSHIGDMGSWPSQQAFHRAVDQMLSM FT QRTRPDLLVCDLHPSYATTAWAQRYSESNDIPLVQVQHHEAHAMALLAEHRACGTPAVI FT LAADGTGYGHDNTIWGGELLSYHPDTGFERTWHVPTFELVGGDRAVQHPWRIAAGIAHA FT WGLDWDCGKESSILSHTSAAEIELVESQLSSGFGVVRTSSLGRVFDAAAAIVGIHPPSF FT EAESAMLFEAAARNCEKRESEATSFPEAFAELLETRNPWTFHHAVAQILQHHIDEAAVG FT MSTGLTGGCALNQLLSSMLRVDMRHQIVPPNDGGLSLGQAVLGRWTVSTA" FT misc_feature complement(645789..646313) FT /note="HMMPfam hit to PF01300, SUA5/yciO/yrdC family" FT misc_feature complement(646686..646952) FT /note="HMMPfam hit to PF00708, Acylphosphatase" FT misc_feature complement(646899..646931) FT /note="ScanRegExp hit to PS00150, Acylphosphatase signature FT 1." FT CDS 646965..647303 FT /transl_table=11 FT /locus_tag="DIP0670" FT /product="Putative hydrogenase nickel incorporation FT protein" FT /note="Similar to Nostoc punctiforme hydrogenase nickel FT incorporation protein HypA SW:HYPA_NOSPU (Q9EYH3) (113 aa) FT fasta scores: E(): 4.6e-06, 30.35% id in 112 aa, and to FT Rhodobacter capsulatus hydrogenase nickel incorporation FT protein HypA or HupL SW:HYPA_RHOCA (P26409) (113 aa) fasta FT scores: E(): 0.0006, 27.67% id in 112 aa" FT /protein_id="CAE49187.1" FT /translation="MLVHEVALSSQLARAVDRAAQGRRVLVVRVRIGVLRQVVPETLEY FT AWGFVIKGTPLDGAVLETTSVPLRLRCPDGHITDDGELKFSCATCGAPAEVISGEEFTV FT MDIEVEQS" FT misc_feature 646974..647294 FT /note="HMMPfam hit to PF01155, Hydrogenase FT expression/synthesis hypA family" FT CDS 647316..648077 FT /transl_table=11 FT /locus_tag="DIP0671" FT /product="Putative hydrogenase nickel incorporation FT protein" FT /note="Similar to Rhodobacter capsulatus hydrogenase nickel FT incorporation protein HypB or HupM SW:HYPB_RHOCA (P26410) FT (335 aa) fasta scores: E(): 1.3e-34, 45.78% id in 249 aa, FT and to Escherichia coli hydrogenase isoenzymes nickel FT incorporation protein HypB or B2727 SW:HYPB_ECOLI (P24190) FT (290 aa) fasta scores: E(): 7.4e-34, 44.58% id in 231 aa" FT /protein_id="CAE49188.1" FT /translation="MGRFHRHDDGTVHSHDHDHHGHSHDVGDHSGYETGRERIEVLEDI FT FHENDHCAADNKELFDAHQVRCINIMSSPGAGKTTVLQHVLRAAEGKVRVGVVEGDIET FT SLDADRLTGFGAQISLLNTGNGFGGECHLDAPMVSRALRGLDLDTLDVVLIENVGNLVC FT PAEFEVGEHSKAMIYSVTEGEDKPLKYPVMFRSVDAVVINKIDLLPYLDFDMELFMKNL FT RQVNPDAKVFEVSAKTGEGLDGWIEWLVGAK" FT misc_feature 647328..647402 FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT misc_feature 647478..647873 FT /note="HMMPfam hit to PF01495, HypB/UreG nucleotide-binding FT domain" FT CDS 648378..649634 FT /transl_table=11 FT /locus_tag="DIP0672" FT /product="Putative uptake hydrogenase small subunit" FT /note="Similar to Azotobacter vinelandii uptake hydrogenase FT small subunit precursor HoxK SW:MBHS_AZOVI (P21950) (358 FT aa) fasta scores: E(): 4.6e-64, 45.75% id in 365 aa, and to FT Escherichia coli hydrogenase-1 small chain precursor HyaA FT or B0972 SW:MBHS_ECOLI (P19928) (372 aa) fasta scores: E(): FT 1.3e-58, 42.54% id in 369 aa" FT /protein_id="CAE49189.1" FT /translation="MNIDAGWQGETLQDNLERRGVSRRDFMKLCSGLAAVFTFGAPISA FT RSEELKSSAEEIAKKLGAVTKPNVAWLQLQECTGCMESVLRSGGTTVEDMVLGLLSLNY FT NELVMAASGEAAEKALEEVSHEPHILVVNGSVPLNENGVYCTIGGKSAEQVLREAAENA FT TAVLAVGACAVYGSVQAAKPNPTGAVGVEDIITDKPVINVSGCPPIGEVITATITYILT FT HGEAPKVDAEGRPLFAYDQRIHDSCPRRAHYDAGQFVRSFDDDGAKNGWCLYEVGCKGP FT STFSPCPIIQWNMKAGWPIGAGHPCIGCTEKDFFDKFTPFYSVLPNIKGIGIESTTEKI FT GLGLMGAAAAGVAVHGGITALRSQKENRLSRENDVALAAFGDGPGPVALPFPTVNAAGN FT GHGGVDKRGQSASSKNEEA" FT misc_feature 648561..648629 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 648630..648704 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 648738..649040 FT /note="HMMPfam hit to PF01058, NADH ubiquinone FT oxidoreductase, 20 Kd subunit" FT misc_feature 648759..648830 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 648888..648962 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 648975..649046 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 649053..649106 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 649107..649163 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 649179..649259 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT misc_feature 649263..649304 FT /note="FPrintScan hit to PR00614, Ni-Fe hydrogenase small FT subunit signature" FT CDS 649640..651385 FT /transl_table=11 FT /locus_tag="DIP0673" FT /product="Putative uptake hydrogenase large subunit" FT /note="Similar to Bradyrhizobium japonicum uptake FT hydrogenase large subunit HupB or HupL SW:MBHL_BRAJA FT (P12636) (596 aa) fasta scores: E(): 2.8e-98, 45% id in 591 FT aa, and to Escherichia coli hydrogenase-1 large chain HyaB FT or B0973 SW:MBHL_ECOLI (P19927) (597 aa) fasta scores: E(): FT 2.5e-91, 41.25% id in 589 aa" FT /protein_id="CAE49190.1" FT /translation="MAERVVIDPLTRIEGHLRIELERDGKNISNAWSETTQFRGIETIV FT KGRDPRDVWAFVGRICGVCTSTHSVAAVMAVENAIGSQVPKQAELIRDILLGAQEIHDH FT VVHFYHLHALDWVNVVSAADADPKKAVEFANKIGSKWKGNTESQFAKVKKTVQGILDSG FT QLSIFTGGYWDHPDYRLPAEANLMAVSHYLDALEFQRSIIRITTIFGGKNPHPNFLVGG FT MACNIDPNKSETFNQVQLDQIKDWTDEIQEFVKECYYPDAVAIMGAYKDYFKIGASSPN FT FLAIGMAGTRYAGGVVGTPRSHSNRDIKPGVILDGDYSKVHPLDHDKIREYISSAWYSY FT EEGDDAGLQPLVGETTVNYTGPTPPYTWLADDDKYTWSKAPRYDGRPTQVGPVARVLSA FT YIQGHAHTRKLVDDALRSVDMQVKDLNSTAGRTLARAIEAITTADHMAVDLLPAFVQGI FT VGGDYEVFDSSKWEPDTWPKEASDGFGLMEVARGCLGHYVTIEDQKVTRYQAVVPTTWL FT AGGRDPQGNMGPYEESLAGGGHPLLDPKQPLEPLRTIHSFDPCMSCAVHVLDVEGHEEF FT QVMTS" FT misc_feature 649754..651337 FT /note="HMMPfam hit to PF00374, Nickel-dependent FT hydrogenase" FT misc_feature 651308..651337 FT /note="ScanRegExp hit to PS00508, Nickel-dependent FT hydrogenases large subunit signature 2." FT CDS 651382..652536 FT /transl_table=11 FT /locus_tag="DIP0674" FT /product="Putative Ni/Fe-hydrogenase B-type cytochrome FT subunit" FT /note="Similar to Bradyrhizobium japonicum probable FT Ni/Fe-hydrogenase B-type cytochrome subunit HupC FT SW:CYBH_BRAJA (P21960) (244 aa) fasta scores: E(): 2.3e-16, FT 32.65% id in 245 aa, and to Escherichia coli probable FT Ni/Fe-hydrogenase 1 B-type cytochrome subunit HyaC or B0974 FT or Z1391 or ECS1130 SW:CYBH_ECOLI (P19929) (235 aa) fasta FT scores: E(): 6e-13, 30.04% id in 213 aa and N-terminal FT region similar to Homo sapiens vacuolar proton FT translocating ATPase 116 kDa subunit A isoform 2 FT SW:VPP2_HUMAN (Q9Y487) blast scores: E(): 2.6, score: 34 FT 30% id" FT /protein_id="CAE49191.1" FT /translation="MKLIHVAQSYSVRKLSPGRLLALAAAAPEHTEDPIDHALANSLAV FT NRPDIDLPQASAYEPATPQRKYSLARVDNFRMAGEDRPVTIMRGDLATVMSKAHATREE FT KTLLERNADVLTKSGRRCLGIATKEADGRFHMEGFVAVGVEDDDEIRQHSGRSEWVRVN FT VWSGMLRFQHWANMFLIIAMTLTGYYIMDPYYRPTGGDVGYMMGWIRLIHFVAGFLWIA FT LGLSRVVLAFTSKDRQMRWRAFWPLNNKQDFKNLLGIIQYYAFIKRHGPLFLAHNPLQQ FT LSYTGIYVLCLAQMVTGMTLYGLANQTNWFWIMMSYPAHWWGIPVIRLIHAVIMYIIWA FT FVIIHVYLAVRADALERHGGVSSMFNGAVWMRRGARPVDAPEIG" FT misc_feature 651844..652500 FT /note="HMMPfam hit to PF01292, Nickel-dependent FT hydrogenases b-type cytochrome subunit" FT misc_feature 651874..652500 FT /note="BlastProDom hit to PD005374, PD005374" FT misc_feature 651880..651951 FT /note="FPrintScan hit to PR00161, Nickel-dependent FT hydrogenase/B-type cytochrome signature" FT misc_feature order(651901..651954,652012..652080,652231..652299, FT 652357..652425) FT /note="4 probable transmembrane helices predicted for FT DIP0674 by TMHMM2.0" FT misc_feature 651991..652065 FT /note="FPrintScan hit to PR00161, Nickel-dependent FT hydrogenase/B-type cytochrome signature" FT misc_feature 652228..652287 FT /note="FPrintScan hit to PR00161, Nickel-dependent FT hydrogenase/B-type cytochrome signature" FT misc_feature 652363..652431 FT /note="FPrintScan hit to PR00161, Nickel-dependent FT hydrogenase/B-type cytochrome signature" FT misc_feature 652456..652497 FT /note="FPrintScan hit to PR00161, Nickel-dependent FT hydrogenase/B-type cytochrome signature" FT CDS 652547..653059 FT /transl_table=11 FT /locus_tag="DIP0675" FT /product="Putative hydrogenase maturation protease" FT /note="Similar to Escherichia coli hydrogenase 2 maturation FT protease HybD or B2993 SW:HYBD_ECOLI (P37182) (164 aa) FT fasta scores: E(): 6.6e-12, 34.88% id in 172 aa" FT /protein_id="CAE49192.1" FT /translation="MITVIGVGNPVMGDDGAGLAVLRRLQGITNDLDWVPRLSTSDPAA FT PNYIDGGTSGMELLPIVQDADKLLLLDAVTGPGAPGDVVRLHGDQIPRLLSSRLSPHQV FT GLLDLLSAARLLGREPNEVAVVGIVVEHCDLHVGLSQAVTDAIETATDAARDVIAEWQR FT LEAAHAN" FT misc_feature 652550..652588 FT /note="FPrintScan hit to PR00446, Hydrogen uptake protein FT signature" FT misc_feature 652586..652621 FT /note="FPrintScan hit to PR00446, Hydrogen uptake protein FT signature" FT misc_feature 652652..653017 FT /note="HMMPfam hit to PF01750, Hydrogenase maturation FT protease" FT misc_feature 652742..652774 FT /note="FPrintScan hit to PR00446, Hydrogen uptake protein FT signature" FT misc_feature 652775..652825 FT /note="FPrintScan hit to PR00446, Hydrogen uptake protein FT signature" FT CDS complement(653056..653421) FT /transl_table=11 FT /locus_tag="DIP0676" FT /product="Putative hydrogenase nickel incorporation FT protein" FT /note="Similar to Bradyrhizobium japonicum hydrogenase FT nickel incorporation protein HypA SW:HYPA_BRAJA (Q45256) FT (113 aa) fasta scores: E(): 4e-06, 28.07% id in 114 aa" FT /protein_id="CAE49193.1" FT /translation="MHELGLLSGVVSATESSIPSGKNRRVLRIALRVGARSGAIPEALE FT GAWPIASSGSACDGAELLIDFIPASVWCPQCDGEVEIDEFFALCCPVCGTPTADLRSGR FT EFEIAWVDIEDPKDEEP" FT misc_feature complement(653080..653346) FT /note="BlastProDom hit to PD003620, PD003620" FT misc_feature complement(653080..653421) FT /note="HMMPfam hit to PF01155, Hydrogenase FT expression/synthesis hypA family" FT CDS 653448..654491 FT /transl_table=11 FT /locus_tag="DIP0677" FT /product="Putative reducing hydrogenase alpha subunit" FT /note="Similar to Methanococcus voltae FT methylviologen-reducing hydrogenase Vhu alpha subunit VhuA FT TR:Q00407 (EMBL:X61204) (420 aa) fasta scores: E(): 9e-06, FT 24.37% id in 398 aa" FT /protein_id="CAE49194.1" FT /translation="MSTTLRLDQFVDPFEAKVVYTDSGGYFDLSGLPRLDPMLVGRNVA FT EVPDIVKRLCGLCPVAHHLAGVRALDALCGVEVPESAQLVRLLLHHGSILYASRDMDIK FT RLGKAVMAAAGSPGHFPDVAIPGGVRALPDPQALAELRLPENYEESFEPVPYDGFDMML FT TSHGTLDPLGDHVTARSGEERITFDLQTWADHVAESRPGDPAPRPLVHGHPYRVGPYAH FT GEAMVPRSLAEIRRIIADPRLCEGEFRKESSILSGIGVGAVEGPRGLLVHRYVANEDGV FT LVDCQILTPTAQNEAWLASMLEASLQQDSDRGVELSVENSIRTANPCLPCSSAPEGHMG FT VVIEKGN" FT misc_feature 653595..653717 FT /note="HMMPfam hit to PF00374, Nickel-dependent FT hydrogenase" FT CDS 654497..654754 FT /transl_table=11 FT /locus_tag="DIP0678" FT /product="Putative hydrogenase operon protein" FT /note="Similar to Azotobacter vinelandii probable FT hydrogenase expression/formation protein HypC or HupF FT SW:HYPC_AZOVI (P31881) (84 aa) fasta scores: E(): 8.5e-06, FT 36.25% id in 80 aa, and to Escherichia coli hydrogenase-2 FT operon protein HybG or B2990 or Z4344 or ECS3875 FT SW:HYBG_ECOLI (P37185) (82 aa) fasta scores: E(): 0.0017, FT 28.94% id in 76 aa" FT /protein_id="CAE49195.1" FT /translation="MCLGIPARVVEVLDGPLPMAVVDMAGEQRPCSVMYVPEVQVGQFV FT LLQNGYAMEVLDEKSAQESLATIAEFNLVQQVQLAPREPR" FT misc_feature 654497..654523 FT /note="ScanRegExp hit to PS01097, Hydrogenases FT expression/synthesis hupF/hypC family signature." FT misc_feature 654497..654715 FT /note="BlastProDom hit to PD003112, PD003112" FT /note="HMMPfam hit to PF01455, HupF/HypC family" FT misc_feature 654500..654523 FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT misc_feature 654554..654604 FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT misc_feature 654617..654667 FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT misc_feature 654671..654709 FT /note="FPrintScan hit to PR00445, HupF/HypC hydrogenase FT expression/synthesis family signature" FT CDS complement(654751..655413) FT /transl_table=11 FT /locus_tag="DIP0679" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 23.7 kDa protein Rv3268 or MTCY71.08 TR:P96873 FT (EMBL:Z92771) (229 aa) fasta scores: E(): 7.6e-11, 31.48% FT id in 235 aa" FT /protein_id="CAE49196.1" FT /translation="MELLANILATEPAAPRVTVYNEDTGARLDFSGITLDNWAAKVANM FT LREESGLDAGATICIDLPPSWQSIVIALGALAAGITPHFGATSDHPESEALFVTPDHTV FT SGDVDTYLVTDDPFGRGVEECGATLPDGAIDFAPTVRFYGDQFFEPTPRIQDLTATNPL FT QPNTRLISRGWTDLDGFTHAVINPLAAGGSAVIVAGTPTPERIDAICAAEKVSARNL" FT misc_feature complement(654763..654882) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT misc_feature complement(655165..655323) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT CDS complement(655425..656903) FT /transl_table=11 FT /locus_tag="DIP0680" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3367 TR:AAK47708 FT (EMBL:AE007146) (497 aa) fasta scores: E(): 6e-73, 50.1% id FT in 469 aa" FT /protein_id="CAE49197.1" FT /translation="MLLSLLSALVLIVSAAGYFTVGRIGNTVASAGNLVLGGDKGMKEA FT ADGATDILLVGSDSRTDAQGNPLTPEEIELLHAGDEENDNTDTLMVIRVPNDGSSATAI FT SIPRDTYVHDENVGNLKINGVYRAYKNRKASELVNSGESDQKHIDELSKEAGRKALISS FT ISDLTGVTVDHYAEVGLLGFVLLTNAVGGVDVCLNNDVYDEFSGADFKAGQQTLRDGQA FT LAFVRQRHGLPRGDLDRIVRQQAFMASLVAKVLSSGTLTNPSKLSDLGEAVSRSVVIDK FT NWDVMSFANQLQNLAGGNVKFNTIPVTSIDGVGDYGESVVTVDKNQVHQFFDRLLNGNN FT GEETPTSDSEAPAENPHTSTTIDVLNATSTTGLASQVAGHLSAKHYTIGNIGNALEGMY FT HESQIVAADPNNEAVKAIAAELGGLPITQRNDLDADSVVVVIASDYSGPTGDGAESSDS FT SSSTTTVGKPGSDEGEAIVSPEIDAGGQGPRCVN" FT CDS 657162..658052 FT /transl_table=11 FT /locus_tag="DIP0681" FT /product="Putative glycosyl transferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT glycosyl transferase MT3365 TR:AAK47706 (EMBL:AE007146) FT (301 aa) fasta scores: E(): 5.1e-56, 52.12% id in 282 aa" FT /protein_id="CAE49198.1" FT /translation="MSNSTEPALAIITVTYSPGKHLGAFLSSVKEATAQPTYVVLADNG FT SVDGVPEAAAQADPSVEFFPTGGNIGYGSAINAAVRKLAPLRESGKINAEFFVLSNPDV FT VFEPGSIDAMVQCASRHPQAADIGPYIRQSDGSAYPSARQVPTIKNGVGHALFSSVWPS FT NPWSRAYRDNRDMTTERTAGWLSGSCLLVRWDAFEQIGGFDERYFMYMEDVDLGDRFGR FT AGFDNVFCPDAVITHAVGHAAGKHPEKMLPAHHDSAYRFQADRHPGLRYLPLRVLLRVG FT LKLRAVVAVAAAKFK" FT misc_feature 657183..657506 FT /note="ProfileScan hit to PS50167, General FT Glycosyltransferase domain." FT misc_feature 657189..657764 FT /note="HMMPfam hit to PF00535, Glycosyl transferase" FT CDS 658206..659294 FT /transl_table=11 FT /locus_tag="DIP0682" FT /product="Putative mannose-1-phosphate guanyltransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT mannose-1-phosphate guanyltransferase MT3364 TR:AAK47705 FT (EMBL:AE007146) (359 aa) fasta scores: E(): 1e-93, 70.45% FT id in 352 aa" FT /protein_id="CAE49199.1" FT /translation="MTETTLRSDTDAVILVGGKGTRLRPLTVSTPKPMLPTAGVPFLSH FT LLARIKAAGITHVVLGTSFKAEVFEDYFGDGADLGLEIEYVVEDKPLGTGGGIRNVYDK FT LRANTVMVFNGDVLGGTDLGGILDAHHAKNADLTMHLVRVPDPRAFGCVPTDAEGRVSA FT FLEKTEDPPTDQINAGCYVFRRELIGEIPADRVVSVERETFPRLLEEGRRVFGYVDNAY FT WRDMGTPSDFVRGSSDLVRGIAPSPLLEGKTGECLVDESAGVSDGALLLGGTVIGRGTE FT IGAGCRLDDTVVFDGVTIEPGAVIEDSIIGHGARIGANARITGCVIGEGAEIGARCELR FT DGMRVWPGVVIPTAGIRFSSDA" FT misc_feature 658236..658931 FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase" FT misc_feature 659022..659075 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 659124..659177 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature 659193..659246 FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT CDS 659420..659557 FT /transl_table=11 FT /locus_tag="DIP0683" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49200.1" FT /translation="MLARLCSNTFMRHADNEPTSEVFLEAPLYVVPPPYTPMVVAMLLV FT " FT CDS 659753..660052 FT /transl_table=11 FT /locus_tag="DIP0684" FT /product="Putative regulatory protein" FT /note="Highly similar on its C-terminal region to the FT C-terminal region of Streptomyces coelicolor regulatory FT protein WhiB TR:Q53963 (EMBL:X62287) (87 aa) fasta scores: FT E(): 2.4e-22, 82.6% id in 69 aa" FT /protein_id="CAE49201.1" FT /translation="MEDMASNAAPRTRAALDLSIDELFGAVEQEWQEQALCAQTDPEAF FT FPEKGGSTREAKRICQACAVRDECLEYALEHDERFGIWGGLSERERRRLKREIG" FT misc_feature 659843..660034 FT /note="HMMPfam hit to PF02467, Transcription factor WhiB" FT CDS complement(660126..660581) FT /transl_table=11 FT /locus_tag="DIP0685" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 15.6 kDa protein Rv3259 or MTV015.04 TR:O53352 FT (EMBL:AL021840) (139 aa) fasta scores: E(): 4.2e-21, 50% id FT in 136 aa" FT /protein_id="CAE49202.1" FT /translation="MTQRLHRDRHDRGVRGPLFSSALPRYCSRRQRFDATVLEAYAPLQ FT QRYAAQLTHLDIAVDTVPRMRLGFDPALVPDEVVADGPVPLGRVIPAGVDSSGHPTRAR FT LVLFRMAIEQRVVSAQERRELVTTVLTALVANYLNISPTDIDPNFQW" FT CDS 660680..661093 FT /transl_table=11 FT /locus_tag="DIP0686" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 16.8 kDa protein MT3356 TR:AAK47698 FT (EMBL:AE007146) (163 aa) fasta scores: E(): 8.5e-16, 47.65% FT id in 149 aa" FT /protein_id="CAE49203.1" FT /translation="MNHIRRCSRPGCGKPAVATLTYAYARSTAVVGPLSPNDDPHSWDL FT CEAHAARTTAPLGWELVHEDLTFDDESDLTALAEAVREAGTHASGLVDPIRVDTPVPED FT IGGNHPINRVKRQRGRRAHLSVVPEPEDDDDND" FT CDS 661191..662567 FT /transl_table=11 FT /locus_tag="DIP0687" FT /product="Putative phosphomannomutase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT phosphomannomutase MT3355 TR:AAK47697 (EMBL:AE007145) (465 FT aa) fasta scores: E(): 3.1e-106, 63.27% id in 452 aa, and FT to Salmonella montevideo phosphomannomutase ManB or CpsG or FT RfbL SW:MANB_SALMO (Q01411) (456 aa) fasta scores: E(): FT 1.3e-53, 38.22% id in 463 aa" FT /protein_id="CAE49204.1" FT /translation="MRTRESVTKVIKAYDVRGVVGVDIDSDFIAEVGAAFGALMRGEGA FT ARVVIGHDMRPSSPELADAFARGVVSQGVNVIQLGLTSTDQLYCASGELDCPGAMFTAS FT HNPAEYNGIKMCRSGARPVGQETGLAQIIDMLVDGIPAFDGPQGEISHRDTLADYAAFL FT RNLVDLSNIRPLVVAVDAANGMGGHTVPEVFAGLPLEIKPLYFELDGTFPNHEANPLDP FT KNLVDLQKFTPEVGADIGLAFDGDADRCFVVDELGQPVSPSAICAIVAERYLAQHPSAT FT VIHNLITSKSVPEIIAENGGSAVRTRVGHSFIKAQMAEHSAVFGGEHSAHYYFSEFFNA FT DSGILAAMHVLAALGGQDKPLSELMHQYNRYQASGEINSRLASSEAQAERTQAVLDAFA FT DRIESVDRLDGVTVELKDTKAWFNVRASNTEPLLRLNVEAETDQEVAALVEEILAIIRT FT " FT misc_feature 661191..661628 FT /note="HMMPfam hit to PF02878, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain I" FT misc_feature 661248..661268 FT /note="ScanRegExp hit to PS00307, Legume lectins beta-chain FT signature." FT misc_feature 661479..661523 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 661659..661967 FT /note="HMMPfam hit to PF02879, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain II" FT misc_feature 661710..661769 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 661812..661853 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 661899..661946 FT /note="FPrintScan hit to PR00509, FT Phosphoglucomutase/phosphomannomutase family signature" FT misc_feature 661971..662303 FT /note="HMMPfam hit to PF02880, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain III" FT misc_feature 662316..662564 FT /note="HMMPfam hit to PF00408, FT Phosphoglucomutase/phosphomannomutase, C-terminal domain" FT CDS 662616..663623 FT /transl_table=11 FT /locus_tag="DIP0688" FT /product="Conserved hypothetical protein" FT /note="Similar in its N-terminal region to Mycobacterium FT tuberculosis hypothetical 35.3 kDa protein Rv3256c or FT MTV015.01c or MTCY20b11.31c TR:O05899 (EMBL:Z95121) (346 FT aa) fasta scores: E(): 5.1e-06, 27.69% id in 260 aa" FT /protein_id="CAE49205.1" FT /translation="MHTSSWTTPTASGAYDPLAVAFYDIAHEGAQIRAVAQWCESEQAQ FT QLCMLQPRSVIILCPEHWGRAAARLALAVAEPMGCPVHISDQLPRFAGSLDVVVAISER FT ADHDGLSQSIVTAARRGCHVVVACAPHGHIAADAEDVAAIGIPALPLAQGPSPARVFAV FT VTAVLRCLDHTVRAAGDVGAELHISADHADRELQECSPERDQLVNPARQLALLSGRVIH FT SVRGLVAASLADTMSALWTAFGRASASMEAQELEVALPRLEPKEQNIFYDSEFDAPPSS FT NSELPLHTVLWLSAETVTWARSQVSEDTTHERDGVIRMLARGYAATAFFGATDA" FT CDS 663663..664832 FT /transl_table=11 FT /locus_tag="DIP0689" FT /product="Putative mannose-phosphate isomerase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT mannose-6-phosphate isomerase MT3353 TR:AAK47695 FT (EMBL:AE007145) (408 aa) fasta scores: E(): 1.6e-57, 47.43% FT id in 409 aa, and to Escherichia coli mannose-6-phosphate FT isomerase ManA or Pmi or B1613 SW:MANA_ECOLI (P00946) (391 FT aa) fasta scores: E(): 1.7e-24, 38.34% id in 399 aa" FT /protein_id="CAE49206.1" FT /translation="MQLLAPATQAYAWGSRTLIQQLRGDAADSRPIAELWYGAHPSGPS FT VIDGERTLADVIAQDPATQLGHRVVTEHGNRLPFLLKLLAADQPLSLQAHPSKQQAEEG FT FSRENDLGIALGASNRNYKDDNHKPELLVALTEFHAMAGFRPLDKTRELFQALQCEKLN FT RYVGMLDSSPEHEGENLRALFTTWITIPVASRQQLIAAIIEAIDGLSTTSPEWIQVAAR FT NVAQLNDRYPNDIGVLGALLLNYVVLQPGEAIYLSAGNLHAYVKGLGVEIMANSDNVLR FT GGLTPKYVDVPELVRVLRFESLEDPIVRSVAGRYEVPINEFALQRLHIDSEAEHNARLE FT HDGPMIAVCTSGELTINDVVLAPTQALWISADDPAVEVTGSGELFVASV" FT misc_feature 663663..664757 FT /note="HMMPfam hit to PF01238, Phosphomannose isomerase FT type I" FT misc_feature 663672..663728 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT misc_feature 663753..663800 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT misc_feature 663891..663956 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT misc_feature 664026..664052 FT /note="ScanRegExp hit to PS00965, Phosphomannose isomerase FT type I signature 1." FT misc_feature 664026..664097 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT misc_feature 664341..664388 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT misc_feature 664389..664448 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT misc_feature 664446..664505 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT misc_feature 664503..664562 FT /note="FPrintScan hit to PR00714, Phosphomannose isomerase FT type I signature" FT CDS complement(664858..665709) FT /transl_table=11 FT /locus_tag="DIP0690" FT /product="Putative secreted protein" FT /note="No significant database matches. Contains various FT regions with high content in proline amino acid residues" FT /protein_id="CAE49207.1" FT /translation="MTMTNTRRFAIFIASGVSAAVFIGVAVWKFGSTDNLASKNESIAG FT PAAVATTSASGTPVAHSTSTDKPAPSATATPDVSSQDSLSHRAMTQPGSATEMHSQRWE FT EDIAKQLRNNELPHTAKTRRLPTYDADQPATTTHSTAQATPENATPNAPATPSTPRSEG FT SVPTPDHNTETSAPNSTPQAPPAQPQLLDQLPHIELPKVLPAPPVAPAPPVAPAPQADT FT PTSIVEESTVPLIPKLHLSSGTSRENRSAEETPQTADPRKQNAKPSPAPSADARPAAPA FT AQ" FT misc_feature complement(664882..664959) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(665041..665277) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature complement(665050..665103) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(665143..665193) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(665233..665298) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(665488..665526) FT /note="FPrintScan hit to PR01217, Proline rich extensin FT signature" FT misc_feature complement(665623..665709) FT /note="Signal peptide predicted for DIP0690 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.459 between residues 29 and 30" FT misc_feature complement(665626..665682) FT /note="1 probable transmembrane helix predicted for DIP0690 FT by TMHMM2.0" FT CDS 666050..666403 FT /transl_table=11 FT /locus_tag="DIP0691" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49208.1" FT /translation="MSAWETEILLEEVNADFLDELNDLDTEEVVEAIRDACVLAAGEGN FT VSEDERQNGLAAATIVAIWAGAPFTDADAVNEHSFIRANIGEGDEELYEVAASLLDTVE FT TEHDLEAFTEALS" FT CDS 666509..667945 FT /transl_table=11 FT /gene="ahcY" FT /gene_synonym="sahH" FT /locus_tag="DIP0692" FT /product="adenosylhomocysteinase" FT /EC_number="3.3.1.1" FT /note="Similar to Trichomonas vaginalis FT adenosylhomocysteinase SW:SAHH_TRIVA (P51540) (486 aa) FT fasta scores: E(): 2.8e-107, 57.74% id in 478 aa" FT /protein_id="CAE49209.1" FT /translation="MAAFDYNVKDLSLAEAGRHQIRLAEYEMPGLMQLREEYQQEQPLA FT GARITGSIHMTVQTAVLIETLVALGAQVRWASCNIFSTQDEAAAAVVVGPHGTPEDPQG FT VPVFAWKGETLEEYWDCVDKIFSWGDELPNMILDDGGDATMAVIRGKQFEEAGMVPPVE FT EGDSDEYQAFLGMLRKTLAEQPGKWTAIAESVKGVTEETTTGVHRLYHFAEEGVLPFPA FT MNVNDAVTKSKFDNKYGTRHSLIDGINRATDMLMGGKNVLICGYGDVGKGCAEAMAGQG FT ARVKVTEADPINALQALMDGFPVVHVDQAIGDADIVITATGNMGIISFEQMLAMKDHAV FT LGNIGHFDNEIDMASLLHRDDVSRVTIKPQVDEFTLPNGKSIVVLSEGRLLNLGNATGH FT PSFVMSTSFADQTIAQIELFQNDGRYVNEVYRLPKILDEKVARIHVEALGGTITELTKE FT QAEYIGVDVAGPYKPEHYRY" FT misc_feature 666518..667939 FT /note="HMMPfam hit to PF00670, S-adenosyl-L-homocysteine FT hydrolase" FT misc_feature 666737..666781 FT /note="ScanRegExp hit to PS00738, S-adenosyl-L-homocysteine FT hydrolase signature 1." FT misc_feature 667280..667330 FT /note="ScanRegExp hit to PS00739, S-adenosyl-L-homocysteine FT hydrolase signature 2." FT CDS 667945..668562 FT /transl_table=11 FT /locus_tag="DIP0693" FT /product="Putative thymidylate kinase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT thymidylate kinase, putative MT3345 TR:AAK47687 FT (EMBL:AE007145) (214 aa) fasta scores: E(): 7.7e-30, 51.24% FT id in 201 aa, and to Schizosaccharomyces pombe thymidylate FT kinase Tmp or SPCC0.07c SW:KTHY_SCHPO (P36590) (210 aa) FT fasta scores: E(): 7.6e-05, 28.72% id in 181 aa" FT /protein_id="CAE49210.1" FT /translation="MIIAIEGIDGAGKNTLVSAIKERFDADVIGFPRYEQSIHAKLAQR FT ALYGSMGDLTDSAYAMATLFALDRYDAKAVLGRYVGTSKVVLLDRYVASNAAYSAARTR FT NDAMVQWVQELEFEELGLPVPDIHILLHTSPELAAQRAQRREATDASRKLDRYEEDAGL FT QERTFQAYESLAQQKWMSPWLLVHPDESPDTVTQRIIQALSA" FT misc_feature 667957..668541 FT /note="HMMPfam hit to PF02223, Thymidylate kinase" FT misc_feature 668203..668241 FT /note="ScanRegExp hit to PS01331, Thymidylate kinase FT signature." FT CDS 668619..669317 FT /transl_table=11 FT /gene="mtrA2" FT /locus_tag="DIP0694" FT /product="Putative two component system response regulator" FT /note="Similar to Mycobacterium tuberculosis MtrA protein FT or Rv3246c or MTCY20B11.21c TR:Q50447 (EMBL:Z95121) (228 FT aa) fasta scores: E(): 7.6e-61, 70.66% id in 225 aa, and to FT Streptomyces coelicolor transcriptional regulatory protein FT AfsQ1 or 2SCK8.33c SW:AFQ1_STRCO (Q04942) (225 aa) fasta FT scores: E(): 2.4e-36, 45.2% id in 219 aa" FT /protein_id="CAE49211.1" FT /translation="MERTTDGMAPKILVVDDDPAISEMLTIVLEAEGFEPVAVTDGAVA FT VDAFRTESPDLVLLDLMLPGMNGIDICRIIRQESAVPIVMLTAKTDTVDVVLGLESGAD FT DYINKPFKPKELIARLRARLRRTEDSPSETIEIGDLTIDVLGHEVTRGDEEIQLTPLEF FT DLLLELASKPGQVFTREELLQKVWGYRNASDTRLVNVHVQRLRSKIEKDPENPHIVLTV FT RGVGYKTGQE" FT misc_feature 668646..668978 FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT misc_feature 668646..669002 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature 668649..668990 FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature 669078..669296 FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal" FT CDS 669450..670892 FT /transl_table=11 FT /gene="mtrB" FT /locus_tag="DIP0695" FT /product="Putative two component system sensor kinase" FT /note="Similar to Mycobacterium tuberculosis MtrB or FT Rv3245c or MTCY20B11.20c TR:O05890 (EMBL:Z95121) (567 aa) FT fasta scores: E(): 4.6e-89, 53.73% id in 482 aa, and to FT Streptomyces coelicolor sensor protein AfsQ2 or 2SCK8.32c FT SW:AFQ2_STRCO (Q04943) (535 aa) fasta scores: E(): 1.4e-23, FT 30.64% id in 447 aa" FT /protein_id="CAE49212.1" FT /translation="MVSFVTQRLVNTKLDVASSEIDRARASVEQQIESTGSSSSVQVRL FT NSARAVLTSRATSADDTAAYEPVLVVSNPDGSTVTSPEGYRIPERLRSFVDQGQVSYQF FT ATIDRVDGSTYKALIIGSPTASDIPNTQVYLVLSMESDEATLALLRGLFSGAAVVLVVL FT LVGITWLLTQQVITPVRSASRIAERFSSGHLRERMVVTGEDEMARLAMSFNSMAESLSR FT QIHQLEEYGNLQKQFTSDVSHELRTPLTTVRMAADLIVDEADDLSPGTRRASELMVREL FT DRFEALLADLLEISRHDAGVADLAETTLDIRICISSAHQQVDHLAQELGVDIIIDVPEK FT PVEIKGDSRRIERILRNLLANAIDHSEGKPVTLLCRENDEAVSVAVIDHGVGLKPGQED FT LVFNRFWRADPSRVRHSGGTGLGLAISREDAILHGGQLSAAGRPGVGSMFLLTVPRVPK FT RSFTETPIELAAPEPPLEDTDA" FT misc_feature 669891..669959 FT /note="1 probable transmembrane helix predicted for DIP0695 FT by TMHMM2.0" FT misc_feature 669906..670115 FT /note="HMMPfam hit to PF00672, HAMP domain" FT misc_feature 669966..670124 FT /note="HMMSmart hit to SM00304, HAMP (Histidine kinases, FT Adenylyl cyclases, Methyl binding proteins, Phosphatases) FT domain" FT misc_feature 670146..670349 FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain" FT /note="HMMSmart hit to SM00388, His Kinase A FT (phosphoacceptor) domain" FT misc_feature 670167..670820 FT /note="ProfileScan hit to PS50109, Bacterial histidine FT kinase domain." FT misc_feature 670485..670820 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature 670593..670637 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 670647..670679 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 670698..670754 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 670770..670811 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT CDS 670885..672630 FT /transl_table=11 FT /locus_tag="DIP0696" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 61.2 kDa protein LpqB or Rv3244c or MTCY20B11.19c TR:O05889 FT (EMBL:Z95121) (583 aa) fasta scores: E(): 1.6e-14, 28.76% FT id in 591 aa" FT /protein_id="CAE49213.1" FT /translation="MRNHVSRYLTALIAVGCAATTAACTSLPSNSEPQALRSFEASASE FT EPQGPVEDQEPDLLLRDFYEANNNPQQRYSLARRYLTHRASQSWNPAPETLVLDGIEIN FT SAADSSTKNRRYDVRGLIVGSIGEGGEYRPRNERYSTTIGLEKVDGQWRISTLPDQIVV FT QRNELWNHYRQKQVYFFDTSGTTLVADRRWIFQEKMGHNDNHESALLSLILTGPSKSLA FT PGVVNEVPSGAAYAGYHDDYYQFTGLSSLDEDSLKRLTAQSVWTLALAEVPGPYRFKFD FT GATMKSPINGSEDLTVDDFAEYNPLPQQAVDSGLYAFNSNGVKKLNQGVATPTTGTLGN FT THNIESMAVSAKTGATAAVRTAVEGDAKTSTLMLGPIGGQFVDVLKARRLTSPSFELSS FT SSLWVVKDSDQVVRLSRSSENEGIVETVVDTSELGSLGKNISALQLSRSGVRAAFIVDG FT SVYTATVARPNPGQRKLVNVQEIIPSLANVAQSLAWQPNGSLIIGTSKPDAPVWIVAQD FT GSLGSKLSAGNIVAPVMNVAASQSTLYISDARAALELPNSDTSTTYWREVQGLEGSRSV FT LVVPR" FT misc_feature 670885..671004 FT /note="Signal peptide predicted for DIP0696 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.460 between residues 40 and 41" FT CDS 672652..673254 FT /transl_table=11 FT /locus_tag="DIP0697" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 22.5 kDa protein Rv3242c or MTCY20B11.17c TR:O05887 FT (EMBL:Z95121) (213 aa) fasta scores: E(): 8.3e-21, 41.5% id FT in 212 aa" FT /protein_id="CAE49214.1" FT /translation="MELLLPRSCGGCGRAGVRWCLRCQRQWLAPPQRISTTTDPHVPVW FT SMGAFGQSRRRSIIHLKERGRRDLIPFISASVAAAVEYLIAAGELDHDAILVPAPTKRS FT SARKRGGDPVYAVCKQTGYRSEQALWEKESMRDSVGLDVAARRRNVMGKVELVSRPSRP FT VLLVDDVVTTGATIAESVAVLTSAGVKVRGALGWASS" FT misc_feature 673141..673179 FT /note="ScanRegExp hit to PS00103, Purine/pyrimidine FT phosphoribosyl transferases signature." FT CDS 673384..674052 FT /transl_table=11 FT /locus_tag="DIP0698" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0778 TR:Q9CCI7 (EMBL:AL583919) (229 aa) fasta scores: FT E(): 4.6e-35, 48.41% id in 221 aa" FT /protein_id="CAE49215.1" FT /translation="MIMTTPAGSNETLSPDVKVTITGRNVEVPEHFAERVNTKLAKISR FT LDPTLNFFHVELQHEPNPRRSEQSDRIQITATGKGHIARAEAKEDSFYAALETALARME FT RSLRKVKARRSISLSGHRAPLGTGEAAAELVKEAEVAREENKYDHDPYADKVEDVIPGQ FT IVRTKEHPSTPMSVDDALSEMELVGHDFYLFVNEETGQPSVVYRRRAFDYGLISLAKEG FT " FT misc_feature 673435..673734 FT /note="HMMPfam hit to PF02482, Sigma 54 modulation protein FT / S30EA ribosomal protein" FT CDS 674230..676791 FT /transl_table=11 FT /gene="secA" FT /locus_tag="DIP0699" FT /product="Translocase protein" FT /note="Similar to Corynebacterium glutamicum SecA protein FT TR:Q9KX92 (EMBL:D17428) (845 aa) fasta scores: E(): 0, FT 82.36% id in 845 aa, and to Bacillus subtilis preprotein FT translocase seca subunit SecA or Div+ SW:SECA_BACSU FT (P28366) (841 aa) fasta scores: E(): 6.2e-101, 48.06% id in FT 851 aa" FT /protein_id="CAE49216.1" FT /translation="MFGLSKMLRVGEGRAVKRLKKIADDVIALEADYTDLTDEELKAKT FT HEFQERIAQGESVDDLLLEAFAVAREASWRVLGQKHYPVQIMGGAALHFGNVAEMRTGE FT GKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAEWMGRVHRWLGLNVGVILANMQPAE FT RREAYNADITYGTNNELGFDYLRDNMVRSLDELVQRGHHYAIVDEVDSILIDEARTPLI FT ISGPVDGSSQWYSVFAQIVPRMTRDIHYEVDNRKRTVGVREEGVAFVEDQLGIDNLYAP FT EHSQLVSYLNNAIKAKELFNRDKDYIVRNGEVLIVDDFTGRVLDGRRYNEGMHQAIEAK FT ENVEIKNENQTLATITLQNYFRLYDKLSGMTGTAETEASELHQIYKLDVIPIPTNRPNQ FT REDMTDLVYKTQEAKFAAVVDDISERVTKGQPVLVGTTSVERSEYLSQLLQRRGIKHSV FT LNAKFHEQEAQIVAKAGLPGAVTVATNMAGRGTDIVLGGNADIIADINLRERGLNPVDT FT PEEYEAAWDAELARVKEKGAELAEKVREAGGLYVLGTERHESRRIDNQLRGRAGRQGDP FT GTTRFYLSMRDDLMVRFVGQTMENMMNRLNVPDDVPIEAKMVTNSIKSAQTSVENQNFE FT MRKNVLKYDEVMNEQRKVIYTERREILESADIAADIQKMIDDTIGAYVDAATATGYVED FT WDLETLWNALESLYGPSFSAQELIDGDSYGESGELSASDLRKAVLEDAHKQYAELEENV FT TAIGGEAQMRNIERMVILPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGD FT MFNAMKDAVKEETVRQLFLLRKQFAVANEQPAETEEGTVEA" FT misc_feature 674239..675483 FT /note="HMMPfam hit to PF01043, SecA protein, amino terminal FT region" FT misc_feature 674410..674484 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 674524..674568 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 674572..674604 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 674731..674793 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 675184..675252 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 675295..675348 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 675406..675447 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 675484..675972 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 675556..675951 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT misc_feature 675667..675714 FT /note="ScanRegExp hit to PS01312, Protein secA signatures." FT stem_loop 676805..676849 FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS 676843..677046 FT /transl_table=11 FT /locus_tag="DIP0700" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49217.1" FT /translation="MLFLWRRFIRRWLDKSQTAHSNHLWMGAGWIARFELCKKSNVATL FT EGACPYCIDELVALMKMQAFHD" FT CDS 677455..677865 FT /transl_table=11 FT /locus_tag="DIP0701" FT /product="Conserved hypothetical protein" FT /note="Similar to C-terminal region of Mycobacterium FT tuberculosis CDC1551 hydrolase, haloacid dehalogenase-like FT family MT3486 TR:AAK47822 (EMBL:AE007155) (217 aa) fasta FT scores: E(): 0.0053, 32.35% id in 136 aa" FT /protein_id="CAE49218.1" FT /translation="MRGLIVDYVGVLDGPDEDQRRWRNLLAAARAHGIGTAVLSNDPGG FT PAADPIRVLQTQGIVDAVILSGEIGAEKPSEAAFQAAADAIDLPMRDCVMVDDSILNVR FT GAVESGLVGVFYQHFDRAVVEIAGLFGLDGEF" FT CDS 677877..678383 FT /transl_table=11 FT /locus_tag="DIP0702" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.8 kDa protein Rv3231c or MTCY20B11.06c TR:O05876 FT (EMBL:Z95121) (169 aa) fasta scores: E(): 2.4e-25, 53.52% FT id in 170 aa" FT /protein_id="CAE49219.1" FT /translation="MRVYLPATFSILQELDAQGSIVARSGYGFAVTPALRDFYTAGDEE FT EIAESAFEDAALASIRLLAIGDQEAFPYRRVVVSVDVPDEVITLRPDLGESVVVLDPAV FT VGFDSVAAIHVDVEGSEAATAKAIEVIDAADLGDEDAELAVGDALDNFLAWYDPSELSA FT LVDLL" FT CDS 678605..679675 FT /transl_table=11 FT /locus_tag="DIP0703" FT /product="Putative oxidoreductase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 40.8 kDa protein Rv3230c or MTCY20B11.05c TR:O05875 FT (EMBL:Z95121) (380 aa) fasta scores: E(): 4.8e-60, 49.14% FT id in 350 aa, and to Escherichia coli NADH oxidoreductase FT Hcr or B0872 SW:HCR_ECOLI (P75824) (322 aa) fasta scores: FT E(): 1.9e-13, 28.71% id in 296 aa" FT /protein_id="CAE49220.1" FT /translation="MARTSKDRLSKVRKILGRFTTPLLPDDYSVLINPRWSTRELRGTI FT AAVRREADVVHLDIVPGWGVPTQFEPGQFIGIGVEVDGRYIWRSYSLTCTPTTSASLLS FT ITVRAVEHGKLSNHLVGHATPGTTVRLSAPAGSFHLPTPLPPKLALIAAGTGITPIISM FT LRTMAERQQFAETDVVLVYSIRDRAHGLFLEALARMSTQHPQLRVVVQETSSQGRVTPE FT TVASIVPDITSRTVFACGPSTMLDAYESWANKNHVNLTTERFLLDRKATTAQGGTVSFG FT QRASVLVDGATTVLEAGEQAGVQLPFGCRMGLCHTCVRPLTHGHATNLVTGETHEPGSR FT IRTCVCVAAGDITIEA" FT misc_feature 678728..679024 FT /note="HMMPfam hit to PF00970, Oxidoreductase FAD-binding FT domain" FT misc_feature 678809..678841 FT /note="FPrintScan hit to PR00371, Flavoprotein pyridine FT nucleotide cytochrome reductase signature" FT misc_feature 678809..678847 FT /note="FPrintScan hit to PR00410, Phenol hydroxylase FT reductase family signature" FT misc_feature 678866..678889 FT /note="FPrintScan hit to PR00371, Flavoprotein pyridine FT nucleotide cytochrome reductase signature" FT misc_feature 678980..679024 FT /note="FPrintScan hit to PR00406, Cytochrome B5 reductase FT signature" FT misc_feature 679001..679030 FT /note="FPrintScan hit to PR00410, Phenol hydroxylase FT reductase family signature" FT misc_feature 679043..679357 FT /note="HMMPfam hit to PF00175, Oxidoreductase NAD-binding FT domain" FT misc_feature 679049..679108 FT /note="FPrintScan hit to PR00406, Cytochrome B5 reductase FT signature" FT /note="FPrintScan hit to PR00371, Flavoprotein pyridine FT nucleotide cytochrome reductase signature" FT /note="FPrintScan hit to PR00410, Phenol hydroxylase FT reductase family signature" FT misc_feature 679130..679159 FT /note="FPrintScan hit to PR00371, Flavoprotein pyridine FT nucleotide cytochrome reductase signature" FT misc_feature 679307..679333 FT /note="FPrintScan hit to PR00406, Cytochrome B5 reductase FT signature" FT /note="FPrintScan hit to PR00410, Phenol hydroxylase FT reductase family signature" FT misc_feature 679436..679654 FT /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster FT binding domain" FT CDS 679690..680970 FT /transl_table=11 FT /locus_tag="DIP0704" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 48.4 kDa protein DesA3 or Rv3229c or MTCY20B11.04c FT TR:O05874 (EMBL:Z95121) (427 aa) fasta scores: E(): FT 1.5e-86, 52.59% id in 405 aa" FT /protein_id="CAE49221.1" FT /translation="MAIDNIKAYVHLSDADIEEIGRRLDQIKAEVTQSLGARDVAYIKR FT LIRTQRSLEAAGRFALLFAGNKKCWWLGTGLLSTAKILENLEIGHNVLHGQWDWMNDPE FT IHSTTWEWDIVCPSSQWMHSHNFVHHTYTNVLGMDNDVGYGILRVTRDRKWTPLHAFQP FT AVNTVLAAMFQWAVGYYDVELGRYLTKRADWNDTKDKFWETTNKAGRQLARDYVFYPAL FT ARKAFPQAVKANAVANLVRSVWAYSVIFCGHFPDEAETFTKEQFKNEDHNQWYLRQMLG FT SANFYGGKLLTIMSGNLNYQIEHHLFPDMPSNRLAEVGEKVRALCDEYDLPYNVDSFPA FT QLFKVQKTLLKLTLPNKYLVASPDNAPEVRSNRAFSQNPEIENQLAGGSNGSGLRTGLK FT LLKRLRPSIKDAILIYSGRKPRGNQQR" FT CDS complement(680972..681979) FT /transl_table=11 FT /locus_tag="DIP0705" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 34.9 kDa protein Rv3228 or MTCY20B11.03 TR:O05873 FT (EMBL:Z95121) (330 aa) fasta scores: E(): 9.1e-70, 60.18% FT id in 324 aa" FT /protein_id="CAE49222.1" FT /translation="MARRNSHRQWDESDVRVRPSKGSRPRTKDRPKHDNAEFGMVVTKD FT RGRWGVVLDGQDTPVVCMRAREMGRTPVEVGDRVGIVGDTSGRPGSLARIVKLAERSSV FT LRRTADDTDPYERIVVANAQQLLIVCAVADPAPRAGFVERALVAAFVGNLQPVICLTKS FT DLADPTEFASEFAALNVPVVVCGVEDPLEPLQKFTHGAISATIGHSGVGKSTLVNRLVP FT SAARETGEVSGVGKGRHTSTQAVALQLPEGGWIIDTPGIRSFGLAHVDADTVIGVFEDL FT HEAVEQCPRGCTHMGRPADPECVLDTFDADSPTGRRVVAVRKLLGALRTNVDWE" FT misc_feature complement(681338..681361) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(681984..683279) FT /transl_table=11 FT /gene="aroA" FT /locus_tag="DIP0706" FT /product="3-phosphoshikimate 1-carboxyvinyltransferase" FT /EC_number="2.5.1.19" FT /note="Similar to Corynebacterium glutamicum FT 3-phosphoshikimate 1-carboxyvinyltransferase AroA FT SW:AROA_CORGL (Q9Z470) (429 aa) fasta scores: E(): 2.2e-90, FT 63.61% id in 426 aa, and to Escherichia coli FT 3-phosphoshikimate 1-carboxyvinyltransferase AroA or B0908 FT or Z1254 or ECS0991 SW:AROA_ECOLI (P07638) (427 aa) fasta FT scores: E(): 1.4e-31, 33.41% id in 422 aa" FT /protein_id="CAE49223.1" FT /translation="MAQLWDAPTPTNAVHATVRVPGSKSMTNRALILSAIAHRPAQING FT ALRSRDTDLMIRALTALGASVRFDDPNHGAASTSLYVTPAPFHSATIDCGLAGTVMRFV FT PPIAALAHGSVFFDGDVQARTRPMGEILDALRTLGVTVTGTQLPFHVEASGQPAGGVVD FT IDASGSSQFVSGLLLAGARYRTGLTVRHIGGKLPSLPHIEMTVDMLRLAGVQVDDSVEN FT EWRVEPSDVEARTWNIEPDLSNAAPFLAAAAVTGGTVTIPDWPQRTTQAGNVIRDILSR FT MGCTVEMISRGSSFDLRVTGPARGQLKGISLDMSDIGELTPTVAALAALATTPSKLVGI FT AHLRGHETDRLAALTQEITGLGGSCTELADGLHITPSTLHGGTWHSYADHRMATAGAII FT GLVVGGVQVDDIDTTSKTLPGFADMWHTMVRG" FT misc_feature complement(682005..683258) FT /note="HMMPfam hit to PF00275, EPSP synthase FT (3-phosphoshikimate 1-carboxyvinyltransferase)" FT misc_feature complement(682017..683219) FT /note="BlastProDom hit to PD001867, PD001867" FT misc_feature complement(682128..682193) FT /note="Predicted helix-turn-helix motif with score 1310 FT (+3.65 SD) at aa 363-384, sequence GSCTELADGLHITPSTLHGGTW" FT misc_feature complement(682194..682250) FT /note="ScanRegExp hit to PS00885, EPSP synthase signature FT 2." FT misc_feature complement(682962..683006) FT /note="ScanRegExp hit to PS00104, EPSP synthase signature FT 1." FT CDS 683297..683959 FT /transl_table=11 FT /locus_tag="DIP0707" FT /product="Conserved hypothetical protein" FT /note="Similar to Halobacterium sp VNG0686c TR:Q9HRI0 FT (EMBL:AE005014) (229 aa) fasta scores: E(): 4.5e-12, 35.51% FT id in 245 aa" FT /protein_id="CAE49224.1" FT /translation="MCGRFVLFTTDESLLGHPALRIFHSIHAPKGMPPARYNIAPTTII FT PILRVGTTPTEAVIEPARWGLIPAWKREVTLPPLFNARAETVTTKPSFRQAFSTQRCAI FT PMDGYYEWHNKKPYWITTGAPTWVAGLWDSGAGMLSATMITTDSVAPLDWLHHRMPRFL FT NNDELAVWLRGSADEASGLLTPGDASAFHTSLADPSVGNIRNDYPELIDAPTDLFSL" FT misc_feature 683297..683923 FT /note="HMMPfam hit to PF02586, Uncharacterized ACR, FT COG2135" FT CDS complement(683945..684448) FT /transl_table=11 FT /locus_tag="DIP0708" FT /product="Putative secreted protein" FT /note="Similar to Escherichia coli protein YbaK or B0481 FT SW:YBAK_ECOLI (P37175) (159 aa) fasta scores: E(): 1.2e-21, FT 46.49% id in 157 aa" FT /protein_id="CAE49225.1" FT /translation="MSKKKPSGATPALAVLEAAGIEHSVSTFEGGTDHFGDAAAAALDV FT DSDRIFKTLVIDLTAGKGPKRQLAVACIPVTSKLSLKKAAAALSASKATMADQHDAAKS FT SGYIPGGISPIGQKHPLPTVVDETAILFDTIFVSGGKRGLDVELSGEDLIRVVDGSFAD FT LQAE" FT misc_feature complement(684377..684448) FT /note="Signal peptide predicted for DIP0708 by SignalP 2.0 FT HMM (Signal peptide probability 0.703) with cleavage site FT probability 0.238 between residues 24 and 25" FT CDS 684494..685117 FT /transl_table=11 FT /gene="rpoE" FT /gene_synonym="sigH" FT /locus_tag="DIP0709" FT /product="RNA polymerase sigma-E factor" FT /note="Similar to Mycobacterium tuberculosis RNA polymerase FT sigma-E factor RpoE or SigH or Rv3223c or MT3320 or FT MTCY07D11.03 SW:RPOE_MYCTU (O05843) (216 aa) fasta scores: FT E(): 1e-44, 70.33% id in 182 aa" FT /protein_id="CAE49226.1" FT /translation="MATKTSDLDARFERDALPLLDQLYGGALRMTRNPADAEDLVQETY FT VKAYQAFNSFSEGTNLKAWLYRIMTNTYINSYRKKKRQPTQQSSEDVTDHQLLATSSHE FT SVGLESAEVEALKNLPNQRIAQAMNDLSEDYRMVVYYADVEGLAYKEIAEIMGTPLGTV FT MSRLHRGRKQLREALKDVAQEHGIAVEDKHADHTTDTAGRKNKA" FT misc_feature 684566..684733 FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily)" FT misc_feature 684602..684697 FT /note="ScanRegExp hit to PS01063, Sigma-70 factors ECF FT subfamily signature." FT CDS 685114..685365 FT /transl_table=11 FT /locus_tag="DIP0710" FT /product="Putative anti sigma factor" FT /note="Similar to Streptomyces coelicolor anti-sigma factor FT RsrA TR:Q9RL96 (EMBL:AJ010320) (105 aa) fasta scores: E(): FT 5.5e-06, 35.71% id in 70 aa" FT /protein_id="CAE49227.1" FT /translation="MSHEGCSCSELREYMYALLDRELSPVDCARLQAHLAQCPHCAEIV FT EAETELRGLLKRCCCGTAPATLREKITYSISITQIKYQ" FT CDS complement(685370..685714) FT /transl_table=11 FT /locus_tag="DIP0711" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49229.1" FT /translation="MEPYVGIVIFELAKSNTSPEENNSFFREDFYIVYADSEEAAHKLV FT EKRAHEEETPKNAAQDSGPTVTLRHIIDVAPALYGYVDKDCNLYSRHFASLEDYARFEM FT MLGGKDPLSH" FT CDS complement(686052..686312) FT /transl_table=11 FT /locus_tag="DIP0712" FT /product="Putative transcriptional regulator" FT /note="Similar to Mycobacterium leprae putative FT transcriptional regulator WhiB1 or ML0804 TR:Q9CCH7 FT (EMBL:AL583919) (84 aa) fasta scores: E(): 1.5e-29, 81.7% FT id in 82 aa" FT /protein_id="CAE49230.1" FT /translation="MDWRHEAVCRDEDPELFFPVGNSGPALAQVAAAKVVCNRCPVTSQ FT CLAWALETGQDAGVWGGMSEDERRALKRRKNRGRGRARATA" FT misc_feature complement(686100..686306) FT /note="HMMPfam hit to PF02467, Transcription factor WhiB" FT CDS 686383..686781 FT /transl_table=11 FT /locus_tag="DIP0713" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49232.1" FT /translation="MLAGEGGRITQRLTSWMLSECGGGFFVFLKVGGKHVFSPEVLGNN FT DMSVRAWEELTLKSVKDHILGEGCHQSQCGILASSLRGIEESKPCFQWFWVPSFGLCVG FT WLLGVGQIADSVTPKCVALESGRVGRFS" FT CDS 686945..687406 FT /transl_table=11 FT /locus_tag="DIP0715" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae putative membrane FT protein ML0806 TR:Q9CCH6 (EMBL:AL583919) (173 aa) fasta FT scores: E(): 2e-07, 38.34% id in 133 aa" FT /protein_id="CAE49233.1" FT /translation="MNSEQKESNEPYGNASLGTLPPTTIRNAGIIAIVQSAIGLGFAVF FT LVLRSITGAPEESIVYETDTAVTSVGVGTAIFFVIVFGTVIAGAIMMMRGKRWGRGPVI FT MLEILLLPIGFYMISGHALLLAVVTCASAIATLVYLFSPRSLDWAARNY" FT misc_feature order(687056..687109,687152..687220,687239..687298, FT 687308..687367) FT /note="4 probable transmembrane helices predicted for FT DIP0715 by TMHMM2.0" FT CDS complement(687400..688662) FT /transl_table=11 FT /locus_tag="DIP0716" FT /product="Putative secreted protein" FT /note="Low similarity to Mycobacterium leprae putative FT membrane protein ML0810 TR:Q9CCH4 (EMBL:AL583919) (407 aa) FT fasta scores: E(): 1.1e-21, 26.81% id in 414 aa" FT /protein_id="CAE49234.1" FT /translation="MKPSGQEKPRRRSPKTGTLQGSRRDYVATAIISVMCAGAVASVWA FT TAPARHSHLTPASSQADSAQDFYAVPRALTALPSEATPVKTLPADPWSPRPIIAEGLVI FT SYKDRTVTAIDPNDGSTVWSYSRDVPLCSLAQAWGEVVMTYKTGRGCGDVIAVSASSGQ FT YSATRSASASENVSPIMSNDRVGIVSDQRVELWRSDLVRTVEYGDVPIKQEAHLQPHED FT CSITSALTRKDLLAVVDSCEGSSWLRLQKTTPEDSRQPEITQDIDLGNTTAHVVAVGQT FT GAAVAVNSPTPAIISFDAHGHEVARHEIPQAPEITNTAPLVADLTHYITWYHNHTLYLM FT RPDTLAVERELPDAVGTGISLGAHVAYPTAEGWTEIEPMSGQVIRTVPVDRGGYTGFVS FT MGIAELHIVEKRGDQVVIFRQ" FT misc_feature complement(688480..688662) FT /note="Signal peptide predicted for DIP0716 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.563 between residues 61 and 62" FT CDS complement(688659..689969) FT /transl_table=11 FT /locus_tag="DIP0717" FT /product="Putative ATP-dependent RNA helicase" FT /note="Similar to Mycobacterium leprae putative FT ATP-dependent RNA helicase RhlE or ML0811 TR:Q9CCH3 FT (EMBL:AL583919) (544 aa) fasta scores: E(): 2.1e-87, 55.78% FT id in 441 aa, and to Klebsiella pneumoniae cold-shock FT dead-box protein A DeaD or CsdA SW:DEAD_KLEPN (P33906) (642 FT aa) fasta scores: E(): 5.7e-49, 41.91% id in 377 aa" FT /protein_id="CAE49235.1" FT /translation="MSEASVQPTFVELGVAREITDALATVGVKRTFAIQELTLPIALDG FT RDLIGQARTGMGKTYGFGVPLIDRVFDAADVAELDGTPRALVVVPTRELAHQVGDDLKL FT LSRNIPITVATIYGGRPYEEQIAQLESGVDVVVGTPGRLIDLYQRGNLALDHVAVLVLD FT EADEMLDLGFFPDIEKLLAALTHPHQTMLFSATMPGAVVTLARTFMHHPVHIRAEDTGA FT AQTHASTTQVIFQAHRMDKSAVTARILQAEGRGKTIIFARTKRTAAELADDLAQRGFRV FT AGVHGDLGQSAREASLDAFRTGKAHILVATDVAARGLDIDDVTHVINYQTPDDPMTYVH FT RIGRTGRAGHTGTAVTLVGYDELPKWQLINDELNLGQPEPPQWFSTSPELFQALNIPDT FT ATDSVGRSRTAVGSRKFNKSRSPRSQRRPSNKSGKRS" FT misc_feature complement(688893..689717) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(688923..689168) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(689274..689891) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(689322..689909) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature complement(689463..689489) FT /note="ScanRegExp hit to PS00039, DEAD-box subfamily FT ATP-dependent helicases signature." FT misc_feature complement(689793..689816) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(690051..690176) FT /transl_table=11 FT /locus_tag="DIP0718" FT /product="Putative membrane protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE49240.1" FT /translation="MKYRSHNIIVCSLIPPQLPLKARHIPAKIPSSPPVRIVELP" FT misc_feature complement(690111..690176) FT /note="Signal peptide predicted for DIP0718 by SignalP 2.0 FT HMM (Signal peptide probability 0.699) with cleavage site FT probability 0.667 between residues 22 and 23" FT CDS 690227..690454 FT /transl_table=11 FT /locus_tag="DIP0719" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 10.1 kDa protein MT3304 TR:AAK47646 FT (EMBL:AE007142) (97 aa) fasta scores: E(): 4.5e-11, 51.38% FT id in 72 aa" FT /protein_id="CAE49241.1" FT /translation="MDIKIGFSDSPRELVVSSREDHNEIVDRIHNALRDAEGVLDLVDD FT HGNRYLVRNARIAYVEVGSTAPRTVGFAGA" FT CDS 690457..691335 FT /transl_table=11 FT /locus_tag="DIP0720" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 31.0 kDa protein Rv3207c or MTCY07D11.19 TR:O05859 FT (EMBL:Z95120) (285 aa) fasta scores: E(): 1.7e-44, 46.69% FT id in 287 aa" FT /protein_id="CAE49242.1" FT /translation="MTDPHAESFFVRFARDYGWRAYAIPVLAVITVWVLIDVFRTPAET FT TTTATVGGAPTATATSAQEKGPDPARQNRPDIAITELPSGPEFTQKGEGTYRTVGNAGA FT HAGKDHDKVFTYVIEVENGINTAAYGGDDAFAAMVDATLTNPKSWTHDKRFGFEHVDAG FT AVKDPDLRIQLSSVDTTHGLCGNNIAMETSCFYGIGNRVVINESRWVRGAKPFQGDLGA FT YRQYLINHEVGHGIGFANHEPCGKNGELAPIMMQQTLSLSNSELFAIDANETYNDDGAV FT CSANPWPYPFA" FT misc_feature 690505..690573 FT /note="1 probable transmembrane helix predicted for DIP0720 FT by TMHMM2.0" FT misc_feature 691135..691164 FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT CDS 691359..692216 FT /transl_table=11 FT /locus_tag="DIP0721" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0818 TR:Q9CCG7 (EMBL:AL583919) (297 aa) fasta scores: FT E(): 1.2e-34, 39.47% id in 266 aa" FT /protein_id="CAE49243.1" FT /translation="MELQQLPQHVRDAFHAPNTPPRQLGVAWDYGWRVGNVAFSQVIHP FT DRSAWSARVRDKLQPQGLRVVRPLKSTDGRYINAGWRANSFEEGTLARRVDETVVAALR FT LDTALADIDVPDSFSEPDSHDLFSLADHSAWAPEPMVALGVTSDAEAVFLNPAQLTAQR FT LLPKIVLLLRDIDAPIQVTHADMFATTIYSGNQMPVVTDLVGVARPYGYTAAVCIVDAL FT LAGAVDEGIIDRFSHIQHRDQLLLRALVYRIAVHALHPESTSNTGTNLEWVSQTIMSRA FT SVTL" FT CDS 692220..695402 FT /transl_table=11 FT /locus_tag="DIP0722" FT /product="Putative ATP-dependent DNA helicase" FT /note="Similar to Streptomyces coelicolor putative FT ATP-dependent DNA helicase 2SC3B6.07 TR:Q9FCK5 FT (EMBL:AL390968) (1159 aa) fasta scores: E(): 6.2e-29, FT 32.21% id in 1161 aa" FT /protein_id="CAE49244.1" FT /translation="MDAFSTPQDSPTTSAQVIGEDLTAGIPPLQQSFVYAQRPRVEIVY FT NDHSEPIREWDNQLFQEQRGTWRVTGAAGAGVSTLLMDTVAERIRRGVSPESIIVVAAS FT RESAARLRAGIAHRIADGSYTSPASLVRSVHSLAFALLRSLSDEQLRLITGAEQDAVIR FT ELLQGHVDNPSLAAMWPAEARQALGLIGFAREVRDFLLRSGERGLEPEDLEELGARYGR FT PMWASAGKFMREYQQVMNLGGTHSLNASELVSKLLCFDIPDMGWRTIIIDDAQHLDPQS FT AQLLQALMRYTDFTVIAGDPQQSVFHFRGASPEFLLHAPVDHELTLYSSFRQPTVEAKV FT LGSTGDQSEFVADLLRRSHLLEGIRWNDMAVIVRSTADIPSLRRALLSAGVPVQEDPSD FT IILSEQRIVSALILAVRAIYQELSAQELEELALGPIGGADTVTLRRLFRGLRKAEMHAG FT GNRRAIEIMRELIDPKESEEQTQLREQVEAVLTDRELAVVDKIRAVLVRGAQPGSVEEI FT LWEIWDASALSSHLQTVSLRGGVRGAQADRDLDAVMALFDAAGDWVERRPTASITSFVR FT HIAEQELPTGVRDRRLATADAVRIVTAHGSLGQQWHTVIVAGVQEGTWPSLQETGTLFG FT QEDLIDLIDSGIEPNTYISRSAEKLKEEKRLFHVARTRGTHRVVITAVESPESDTAAEP FT SRFLQGIAESKVQGPTTDPETASVQSEIDTETVHLDQYVRLLSVPSIVAELRRELANPD FT SPQRRREQAARQLARLALHQVPGARPEQWWGYGGPSETTSLDISKVSPSLIENALLCPL FT RARLERLVEEENTPIHMLKGTLAHAFAEAVGRGVDPNEAEQLVTQAFEALLDAPAWSLP FT HHMSQWSTMLQRLAHWIDVSHAQRELVGVEVPVNVVVAPGVELRGRIDRLERNDAGEFH FT IVDFKTGKQAVTKDEANENKQLLAYQLALHRGKLMQRNGEPAINTTAEQPGLTVDQAVL FT VYPATDTKTVTTREQAPKDAEELEKFSATLPALLESLSGPQLVARINTRCDQCKIKTMC FT PAQPEGKMVPEC" FT misc_feature 692220..692528 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT misc_feature 693015..693170 FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature 693255..693401 FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature 694137..694169 FT /note="ScanRegExp hit to PS00136, Serine proteases, FT subtilase family, aspartic acid active site." FT CDS 695396..698626 FT /transl_table=11 FT /locus_tag="DIP0723" FT /product="Putative helicase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT helicase, UvrD/Rep family MT3295 TR:AAK47638 FT (EMBL:AE007142) (1101 aa) fasta scores: E(): 2.9e-25, FT 43.03% id in 1120 aa" FT /protein_id="CAE49245.1" FT /translation="MLSPQELSCALGQKFPPTPQQADVISSPLAPTLVVAGAGAGKTET FT MAARVVWLVASGLVDPDRVLGLTFTRKAAQQLSKRIRDRLEQLAGIDNLRDLDPTGALA FT TKLEAIAPTVSTYDSYAGRLISEYGLLLPVEPSSRLISQTELFQIAHSIVSAHTGALNT FT SNSPNTVTSTLISLVSEMDNHMVSPTDIEEESAAFLAMIEDVEATSKRAPSKEVYKWRD FT TQVLRNELLPLVQQLKTHLADNHLMTFGEQMSLAARLAAENPQVGASQRNRYQIIMLDE FT YQDTGHAQRVLLKSLFAGTAVTAVGDPMQSIYGWRGATAANLERFLTDFGSNGSPATKK FT ELTVSFRNPPEVLDLANRVSRELLGVPEDPRRPVQPLEPGPAALNGIVRLGFFPSMDEE FT RSYVADHLAQAYEQHDGDHPFTAAVLVRKRKHSAAIALELQQRGVPVEIVGLAGLLGIP FT EVADLVAIATLLVRPYDTQAAMRILAGPSVGLGMADLMALSDRAYNLSGRDRRATTELS FT RDPLERLKQIIADTTPSDQDSIVGLAEAVADLDERLDSSDGPRYSAKGSERLRTLAARL FT RYLRTNSLSNSLPDLFADIERVFGIRTEVLQREDPRSDGATGTAHLDRFAEVVQDFSRI FT PGANLSLLLDYLSLAESEENGLEPGEVQVTADRVQILTVHKAKGLEWQHVAVLHADANT FT YVAKASTWLTNASAVPSALRGDAKGDEDLVGAPVFEIDTPDTAAELAKAGKAHIADFKQ FT VAAEENARLFYVAITRAEQQVLVTASADPSKKRPVLPYEYLTMLRNDFPDSVEEWHERG FT EAEDYVPPAPQEAVFPPNYIVVGAEDVFAAMQKQPDLISDDDLFERWEKEVSALIEEHE FT QLSAPVVAVNIGVELTATDIVNLAKNPENFAQRRRRPVPFKPNSYAKRGTAFHEWLENR FT FGAEALLDETELPGIGEELDDSDLDRLKEAFLDSEWADRTPEHVEHPFEVSIGRHIVRG FT RMDAVFKNSDGRWIVVDWKTGQPPTDNHEKESVAMQLAVYRLAWARLQGIDVDRVDAVF FT HYVGRNVTYRPQQLPDGEELALKLDPSV" FT misc_feature 695444..696901 FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature 695501..695524 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 698671..699759 FT /transl_table=11 FT /locus_tag="DIP0724" FT /product="Putative membrane transport protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT transporter, putative MT3294 TR:AAK47637 (EMBL:AE007142) FT (355 aa) fasta scores: E(): 2.5e-75, 61.78% id in 348 aa, FT and to Escherichia coli putative potassium channel protein FT Kch or B1250 SW:KCH_ECOLI (P31069) (417 aa) fasta scores: FT E(): 1.5e-07, 26.06% id in 234 aa" FT /protein_id="CAE49246.1" FT /translation="MSAKPLPNRETYRFRGNDELTELPEHTLLNIIRIPGNPLVSPIRL FT IARRFGYALALIIIVALVVYLDEGGYSEHLTFIDALYYSAVSLSTTGYGDITPITQSAR FT LLNIIIITPLRLAFVILLVGTTLSVLTEESRRAWKIQRWRKRMRNHTVVIGYGTKGRSA FT IAALLADGVAPKDIVVVDTDSVALEAANNAGLVTVNGSATKSEVLKLAGVPKAKAVVVA FT PNIDDTAVLVTLSVRELSPSAWIVASVRESENQHLLEQSGADSVVISSETAGRMLGLAT FT VTPSVVEMMEDLLSPDEGFSVAERPIGEDEVGANPRHLADIVLGVVRSGELYRIDSPEA FT ETVEPGDRLLYVRRVFSEDVRD" FT misc_feature order(698818..698871,698992..699060) FT /note="2 probable transmembrane helices predicted for FT DIP0724 by TMHMM2.0" FT misc_feature 698884..698997 FT /note="ProfileScan hit to PS50265, Pore region of potassium FT channels." FT misc_feature 699118..699477 FT /note="HMMPfam hit to PF02254, KTN NAD-binding domain" FT misc_feature 699121..699216 FT /note="ProfileScan hit to PS50205, NAD binding site." FT CDS 699791..700474 FT /transl_table=11 FT /locus_tag="DIP0725" FT /product="Putative hydrolase" FT /note="Similar to C-terminal region of Vibrio cholerae NADH FT pyrophosphatase NudC or VC0331 SW:NUDC_VIBCH (Q9KV27) (269 FT aa) fasta scores: E(): 2.3e-11, 32.75% id in 174 aa" FT /protein_id="CAE49247.1" FT /translation="MPVAHGTPVTTTPCPHIATYPVTNDLCVQRVSDAEAEAVTGETKR FT VTEGWVMKAIAVLHHRENTLFDPLTGGPLDFRNDSIAGATETGREVFPRIDPAVIGLIE FT LAGQDRILIAENAQRRGFYSLIAGYVGLGETCEEAMVREALEETGRRISQVRYVRSQPW FT PYNGALMMGMVATTTDEHPIQPLDGELARITWASRSELREGVFTLPHRNSLAFQLITEW FT VGQHD" FT misc_feature 700073..700450 FT /note="HMMPfam hit to PF00293, MutT-like domain" FT misc_feature 700172..700237 FT /note="ScanRegExp hit to PS00893, Nudix hydrolase FT signature." FT CDS 700467..702518 FT /transl_table=11 FT /gene="uvrD" FT /locus_tag="DIP0726" FT /product="Putative DNA helicase II" FT /EC_number="3.6.1.-" FT /note="Similar to Mycobacterium tuberculosis probable DNA FT helicase II homolog UvrD or Rv3198c or MT3291 or MTV014.42c FT SW:UVRD_MYCTU (O53344) (700 aa) fasta scores: E(): FT 2.7e-133, 58.92% id in 689 aa, and to Escherichia coli DNA FT helicase II UvrD or MutU or PdeB or Rad or RecL or B3813 FT SW:UVRD_ECOLI (P03018) (720 aa) fasta scores: E(): 7.8e-37, FT 32.16% id in 656 aa" FT /protein_id="CAE49248.1" FT /translation="MINLDDLDDDQRAAAEAPRGPVAILAGAGTGKTRTITYRIAHLID FT RGMASPHRVLAVTFTRRAAGEMRHRLGLMGVGGVQAQTFHSAALRQLRYFWPQVAGNLP FT WRIVDNKFSLVGRATRSVGVESSTENVRDLLSEIEWAKAALITPDNYVERLNGRKTPVA FT AEKVAEVYRRYEQSKTTPEGMLLDFDDLLLHTAGAIENSAAIAEEFRQQYRTFVVDEYQ FT DVTPLQQRVLDAWLGERDDVTVVGDANQTIYSFTGASPDYLLGFSRKYPHATVVKLQRD FT YRSTPQITDLANRVIDQAVGRIAGTRLELEGMRTAGPQPEFQEFSDEPAEAHAVALKIK FT QLLAQGVPASEIAILYRINAQSATFEQALDDAGIVYQVRGGEEFFQRSEIKQAMSEIIR FT TTQRDDLPDARGVDLERIVRAILAPLGLSKHEPEGARARERWQSLEALAELSLEIGQAT FT PDLNLQGLLAALNQRASAKHPPTMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPISHAM FT KAGDHAIEEERRLFYVGVTRAREILYCSWAKARQEGGRATRKRTRFLDSIVPELDVSSV FT PPRSKRRQRCRVCGTTLNSPAERIVGRCDQCPSGVDGEVFETLRKWRADTARELNVPAY FT IVFTDATLHAIAENLPQSAEELMQISGIGQVKVERFGPGLLETLVPFQ" FT misc_feature 700485..701651 FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature 700542..700565 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 702291..702515 FT /note="HMMPfam hit to PF00570, HRDC domain" FT /note="HMMSmart hit to SM00341, Helicase and RNase D FT C-terminal" FT CDS complement(702463..703362) FT /transl_table=11 FT /locus_tag="DIP0727" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Mycobacterium tuberculosis CDC1551 FT hypothetical 31.6 kDa protein MT3288 TR:AAK47629 FT (EMBL:AE007141) (299 aa) fasta scores: E(): 3.9e-06, 28.12% FT id in 288 aa" FT /protein_id="CAE49249.1" FT /translation="MDMNQGGLISLSPHAQVLLRPEGIQFGLDSANAGIFAAPESLIVA FT IVQVLRGFWQPIAKTTAIEQLTEAGLQPVAARGLIDDLLHHRVLSIVERNLTVAVGGFG FT PLVAPIKAVLGCAGISVVQAHTIQRCMTLESLLSREVPLIWINSTPSFSHIAQELVEVK FT TMIPVGLMDNHAIIGPVRIDGRGPCGLCTDLYRSDADPQWPALLKNATAPLTAPAALTY FT ATAARVTRLVEQLSEPRQRVTVTAGLVIRVSSDGELSSEIMSPHSRCPLCWSSRWDCDP FT LTGTEQAFLADLGQNVLL" FT CDS 703392..703913 FT /transl_table=11 FT /locus_tag="DIP0728" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 19.2 FT kDa protein 2SC3B6.18 TR:Q9FCJ4 (EMBL:AL390968) (168 aa) FT fasta scores: E(): 2e-25, 46% id in 150 aa" FT /protein_id="CAE49250.1" FT /translation="MSKRTTPTYPVEVIRSDRRTRTVSARLVGGKILIRIPASMSKKDE FT KKFVAEMVDKVRTKTQSSAPTDEALLHRAQHLNRTVLENRATIGSIRWVTNQTRRWGSC FT SQTTNDIRISHRLQGVPDYVLDAVIIHEMVHTFIEGGHSPEFWQWADKAPKAERAKGYL FT EAWQRMGDVG" FT misc_feature 703773..703802 FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT CDS complement(703910..705301) FT /transl_table=11 FT /locus_tag="DIP0729" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 49.4 kDa protein Rv3195 or MTV014.39 TR:O53341 FT (EMBL:AL021646) (472 aa) fasta scores: E(): 5.1e-65, 45.37% FT id in 432 aa" FT /protein_id="CAE49251.1" FT /translation="MNSNGFGFSFNFGGRGDDDDNSRDSNPFGSGGLGDMLNQFGQMLS FT GMGSSMNSPEGQGAVNYALAERIARQQIESAKAPAATEADTKAVTEAVNLVELWLDDAT FT ILPTASNKVEAWSANDWLTNTLPMWKRMVTPVAEHMAQAQLDSLPEEAREMVGPMMQMM FT NQMSGMNFGMQLGHALGDLATQTLSGTDFGVPIAPAGVTALMINNVRKETQGLKIEQRE FT VLVYLAAREAARQRLLRHVPWLAEQIVASVEEYAAGLVIDTSHIEEAMREMNLESGDPA FT AIHEAMERMQNLDMSPRITSRNANAVSRLETLLALIEGWVEHVVTEAMGSRVPSTAALN FT EAWRRRRATGGSAEKAFAQVVGIEFGAPKVAEAQELWRRVDVAVGVEKRDHVWDHPDFL FT PVAEDLDNSAEFIDGLLDTASADEFDPIAEITKLEEMLSQQSEEQQKEQRENPSDPDED FT SPKND" FT CDS 705382..706434 FT /transl_table=11 FT /locus_tag="DIP0730" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium leprae putative secreted FT protein ML0643 TR:Q9CCM7 (EMBL:AL583919) (340 aa) fasta FT scores: E(): 5.2e-46, 43.42% id in 350 aa" FT /protein_id="CAE49252.1" FT /translation="MKRRVNTLVLGAIPVVALASLVTLDHIPGTDIDLTVPYAAEGPGP FT TVNTLGDVDGKPVVNVSGAEIHKTTGNLNMTTVSVRTHLTLGQALGRWLIAHDTLVPIE FT QIFPQGKTPEEVDEVNKAAFSTSEASATIAAMNQLHKPVDTVVAHISPEAPAAKVMAEG FT DVITQVAGAKATGPSQVRDAVRAKKPGETISIGFLRDGKQLTREVTLGTHPEDDKVAFL FT GVSMTARPADGITVDYNLEDIGGPSAGLIFSLAVVDKLSPDEINGGKFVAGTGTIDDDG FT TVGPIGGIRHKVRAARDAGAEVFLSPEKNCSEALKGKPGDMVVISVDSLSDAIHQLDNF FT KAGKEVKTCS" FT misc_feature 705382..705453 FT /note="Signal peptide predicted for DIP0730 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.346 between residues 24 and 25" FT misc_feature 705733..705981 FT /note="HMMPfam hit to PF00595, PDZ domain (Also known as FT DHR or GLGF)." FT CDS complement(706446..707147) FT /transl_table=11 FT /locus_tag="DIP0731" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49253.1" FT /translation="MVSFVPFGFAAVQRSSVVRCFSACAVVVAISGVSACSRDTPEAPQ FT STSATSSAAPSTTSASTTAPSSASASSITQTSKVSSQAEAPTSVPPMLDSKHKNVQRAF FT EQFGALAPESLFAQFDTCDANGVQNSMACSGHDVGQFQFFKSDAKAASTTQLLTELRSS FT RVIEDTGRRVVGWSTLGGTAVITVVDNDNGLVMQQMVSTDEVDPAEHIYELGLAQAPKK FT ESAAEPTPSSK" FT CDS complement(707195..707698) FT /transl_table=11 FT /locus_tag="DIP0732" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49254.1" FT /translation="MSGMQYPPQALNKAMLEAVDFIHAEGWDAPPTLFALVPAELIGQA FT LPDDDDSPLALVVQDNLPEHIRPGSEELGDYVSRISWPEQVVGAVLAQEIMFRDSSADS FT DEARPARLFSGVLRGDADLTLLQIRPTEEELTERGPFAEDDIELRGGPSVAPGVIAALR FT ATLD" FT CDS 707871..710834 FT /transl_table=11 FT /locus_tag="DIP0733" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis integral FT membrane protein Rv3193c or MTV014.37c TR:O53339 FT (EMBL:AL021646) (992 aa) fasta scores: E(): 1e-154, 46.03% FT id in 1008 aa" FT /protein_id="CAE49255.1" FT /translation="MATGFTRPAAAPKRPQRRLTWLIPLLMILGALVPTVVDLYTDWLW FT FGEVDFRGVFNKVIATRIGLFVGFGLLAGIVTFLAGWFTYRGRPDELEFFDPDSPVVQY FT RAAVEKGVHRFLVVLPVVIGIAAGFLGQQAWQTVQLFFNRQDFGVSDQQFGMDYGFYAF FT TLPALRLVVSTFSVLLVVAFLIALVGHYLLGGIRAGNQAAGVKGSITNYAKVQLAVTGG FT LYLLVRMASYWLDRYSLLNNSHETFTGGSYTDINAVLPAKIVLLVISAVVAISFFSVIV FT TKDLRIPAISTVLMIVSSLAIGNAWPIMMERFSVSPNRAEKESEYISRNIEATRYAYGI FT TDDAVTYKDNWGAKGASSEKVASDSATVSNIRLLDPEIISPTFTQQQQLRNFYGFPKSL FT AMDRYVIDGELRDFVVAARELDPNALKENQRDWINRHTVYTHGNGIVAAQANQVDEVAR FT DVGSARGGYPVYTVSDLQTTDKEAQELGIVVKEPRIYYGPVIASATDGADYAVVGSEND FT SSVEYDTDSSTYTYQGKGGVNIGNVINRAAFAMRYQELNLILSDRVNGNSKILYDRDPR FT ERVHNVAPWLTTDSTTYPAVIDGRVKWIVDGYTTLTSLPYAERTSLSEATNDTTAQVGN FT SAQRLVTDNVGYIRNSVKAVVDSYDGSVDLYEFDENDPVLKAWKGVFPGTVKAKSEISE FT ELMNHLRYPEDMFKVQRKMLARYHVDDARDFFTNDRFWSVPSDPSATEGQKDVAQPAYY FT VVAADPDTGKPSFQLITPFRGLQREYLAAHMSVSSDPDNYGKITVRVLPTDTLTQGPKQ FT AQDTMMSSDQIASDRTLWKDTNDLFNGNLLTLPVGDGDILYVEPLYSQRKNQASAFPKL FT LRVLVSYQGKVGYAPTIAEALSQVGIDPKEAQDLGEAKGLKPESQNRDKPEDKEGKAPS FT TPSAPASGSGTTGEAIGKINDALNKLQSAKNGSNEEYGRALDELDKAVEEYRKVAGQ" FT misc_feature 707871..707987 FT /note="Signal peptide predicted for DIP0733 by SignalP 2.0 FT HMM (Signal peptide probability 0.624) with cleavage site FT probability 0.541 between residues 39 and 40" FT misc_feature order(707931..707999,708042..708110,708213..708281, FT 708378..708446,708504..708572,708642..708710, FT 708729..708797) FT /note="7 probable transmembrane helices predicted for FT DIP0733 by TMHMM2.0" FT tRNA 710975..711048 FT /gene="tRNA-Met" FT /product="transfer RNA-Met" FT /anticodon=(pos:711009..711011,aa:Met) FT /note="tRNA Met anticodon CAT, Cove score 66.57" FT CDS complement(711318..711887) FT /transl_table=11 FT /locus_tag="DIP0734" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49256.1" FT /translation="MILFASLFNTPDWFGIILSVGFVSGFGVAAAVGGALDSAGMNEAA FT VAVLSAIVGGVIFARWGSKKRHTNELPALDKLPEDMRTGIISLPGQRPSVGCATTSPYS FT FESIALHVAALAVTLFLANILTNWVNDAFPALSFPLFAMDFLVAVGIASIVPAVVWLFG FT RVALIGGLALLIPPMIMLKKSKTRAS" FT misc_feature complement(order(711345..711395,711402..711467, FT 711498..711563,711702..711752,711783..711848)) FT /note="5 probable transmembrane helices predicted for FT DIP0734 by TMHMM2.0" FT misc_feature complement(711756..711887) FT /note="Signal peptide predicted for DIP0734 by SignalP 2.0 FT HMM (Signal peptide probability 0.844) with cleavage site FT probability 0.251 between residues 44 and 45" FT CDS complement(711917..712231) FT /transl_table=11 FT /locus_tag="DIP0735" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49257.1" FT /translation="MLIGETPPTRKVIKSRGWLHALRRLDGYRLDFVAAPHPCTDYCRP FT TRFATRPQRFGDHPVDRALRRLCDDSNRRSLRCPSIHNGLRCQGSPARLQCGPIPWACT FT " FT CDS complement(712417..713427) FT /transl_table=11 FT /locus_tag="DIP0736" FT /product="Putative protease" FT /note="C-terminal region similar to Drosophila erecta FT trypsin zeta precursor Try-ZetA SW:TRYZ_DROER (P54630) (281 FT aa) fasta scores: E(): 0.17, 26.03% id in 242 aa" FT /protein_id="CAE49258.1" FT /translation="MKKTSFSIAALVSSTLLLSAAPALALEFGEPAPANAESSSVAALK FT IGKVGNFGDCTGTLVADQWVLTARHCLESVNNEGTQARIGGKVYDADSWALSPVSDAGL FT LHLTEKVTDATPAKVSRDIPTPGQTGTLYGWSSSSSLARSGQLPMAKMVVKELLGGGPS FT QGTPSEGAPGGATPGEVAPGGAAPSETVPSESQAESIPAGTESIPADGAMMPMIQSAIL FT DAHSVSGAGMQGGDSGGPFFVDGKLAGLATAGTANGDPDLPSPSAAITTLAGTADWIDG FT VTSGRDTKSVLTAENTPAPPKTIQTSADHMWGYLAIACVGLVAAAAWSRIRNGRQ" FT misc_feature complement(712435..712491) FT /note="1 probable transmembrane helix predicted for DIP0736 FT by TMHMM2.0" FT misc_feature complement(712576..713265) FT /note="ProfileScan hit to PS50240, Serine proteases, FT trypsin domain profile." FT misc_feature complement(712591..713343) FT /note="HMMSmart hit to SM00020, Trypsin-like serine FT protease" FT misc_feature complement(712702..712737) FT /note="ScanRegExp hit to PS00135, Serine proteases, trypsin FT family, serine active site." FT misc_feature complement(712702..712740) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(713023..713265) FT /note="HMMPfam hit to PF00089, Trypsin" FT misc_feature complement(713095..713139) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(713215..713262) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(713320..713427) FT /note="Signal peptide predicted for DIP0736 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.845 between residues 36 and 37" FT CDS complement(713430..714386) FT /transl_table=11 FT /locus_tag="DIP0737" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49259.1" FT /translation="MNKPSRIVGLDIARSLAIIGMIIVHMASLLWSTKVVLSGLPSSLF FT AIIAGATMMIIGRNYSSTTFLRLITRGALIILIGLALLPVGGQIQVVLVVMGLVMMLVS FT WMPALGTWWRVGFFIAATIAATIKYAPMTLPQIYPLLAWIAYFIGGMLLYDVYLRGRLQ FT GTSTSETSANTRLSWIVTAVSVVITAVGMYFRFDPEIAGWLRFTGHTGVFGEIILSFAV FT AAIVLHLCLFVGDRFPTAVYPFAAMGTMSLTIYILHVLTAFYWQQNVSLHSTLSATGFI FT VFFLVIANLWKKFVGQGPAEKLVATAIKAIVPSGKGK" FT misc_feature complement(order(713514..713579,713601..713666, FT 713712..713777,713799..713864,713910..713975, FT 713997..714053,714099..714164,714204..714269, FT 714300..714365)) FT /note="9 probable transmembrane helices predicted for FT DIP0737 by TMHMM2.0" FT CDS 714642..714809 FT /transl_table=11 FT /locus_tag="DIP0738" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE49260.1" FT /translation="MYSAQAFRLGIDLRQPRTLAQAKGVMQSQWNVIDAGFFRNDVLRI FT CAGTAAMSVS" FT CDS 715065..716546 FT /transl_table=11 FT /gene="pycB" FT /locus_tag="DIP0739" FT /product="pyruvate carboxylase subunit B" FT /EC_number="6.4.1.1" FT /note="Similar to Methanococcus jannaschii pyruvate FT carboxylase subunit B PycB or MJ1231 SW:PYCB_METJA (Q58628) FT (567 aa) fasta scores: E(): 1.8e-88, 50.81% id in 490 aa, FT and to Propionibacterium freudenreichii shermanii biotin FT carboxyl carrier protein of methylmalonyl-CoA FT carboxyl-transferase TR:Q05618 (EMBL:L06488) (519 aa) fasta FT scores: E(): 1.2e-108, 66.15% id in 520 aa" FT /protein_id="CAE49261.1" FT /translation="MSPRKIGVTEVALRDAHQSLFATRMAMEDMVASCEDIDNAGFWSV FT ECWGGATYDACIRFLNEDPWERLRTFRKLMPNSKLQMLLRGQNLLGYRHYEDTVVDKFV FT EKSKENGMDVFRVFDALNDPRNMERAMQAVKKVGGHAQGTICYTVSPLHTVEGYIEQAG FT RLLDMGADSIALKDMAALLKPQPAYDVIRGIKETYGEDTQINVHCHSTTGVTLVTLMKA FT IEAGADVVDTAISSLSLGPGHNPTESLVEMLEGTEYTTDLDMDRLIKIRDHFKTIRPKY FT KEFESKTLVDTNIFLSQIPGGMLSNMESQLTAQGAGDRIDEVMREVPIVRKDAGYPPLV FT TPSSQIVGTQAVFNVLMGRYKVMTAEFADLMLGYYGECIGERNAELVEQAKAQTKKEQI FT TVRPADLLEPEWDHLVEEASKLEGFDGTDEDVLTNALFPGVAPGFFKTRPEGPKNVGKD FT PSKIKTRDNQAVLEPITYKVTVGGRSQTVKVEPAE" FT misc_feature 715098..715934 FT /note="HMMPfam hit to PF00682, HMGL-like" FT misc_feature 715944..716516 FT /note="HMMPfam hit to PF02436, Conserved carboxylase FT domain" FT CDS 716559..718115 FT /transl_table=11 FT /gene="mmdA" FT /locus_tag="DIP0740" FT /product="methylmalonyl-CoA decarboxylase, alpha-subunit" FT /EC_number="4.1.1.41" FT /note="Similar to Propionigenium modestum methylmalonyl-CoA FT decarboxylase, alpha-subunit MmdA TR:O54028 (EMBL:AJ002015) FT (512 aa) fasta scores: E(): 2.2e-105, 54.1% id in 512 aa, FT and to Bacillus subtilis putative propionyl-CoA carboxylase FT beta chain YqjD SW:PCCB_BACSU (P54541) (506 aa) fasta FT scores: E(): 9.2e-91, 50.1% id in 497 aa" FT /protein_id="CAE49262.1" FT /translation="MAKELSMAERLEKLAAAKAEVSLGGGQAKIDKQHEKGKLTARERI FT DALVDDGTFFETGMFAKHRTTHFGMDKANAPADGVVTGSGAVFGRPVHIASQDFTVMGG FT SAGETQSNKVAAMMEASATTGTPFIFINDSGGARVQEGIDSLSGYGKVFYQNVLLSGLV FT PQVSIIAGPCAGGAAYSPALTDFIIQTRKANMFITGPGVIKSVTGEEVTSDALGGADAH FT MTKAGNIHFIADDDEQAVLIAQKLLSFLPQNNTEEPPVVDPDPVVEPDPELRDIVPVEG FT KKGYDVRDIISRVVDRGDFLEVQAGYATNIVVGFARIVGRTVGIIANQPNVMSGVLDIN FT SSDKGSQFIRFCNAFNIPLVTFVDVPGFMPGVAQEHGGIIRHGAKMLYAYSAASVPKVT FT IELRKSYGGAHLAMCSKDLGADRVFAWPTAEIAVMGAEGAVNVVFRKEIEAAEDKDAKR FT EELIQLYKDTFSTPFMAASRGLVDDIIDPAETRLHIANALEVLTNKRVTRPAKKHGLGP FT V" FT misc_feature 716610..718106 FT /note="HMMPfam hit to PF01039, Carboxyl transferase domain" FT misc_feature 716853..716897 FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature 716955..717011 FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature 717063..717116 FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT CDS 718129..718392 FT /transl_table=11 FT /locus_tag="DIP0741" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49263.1" FT /translation="MSDLNNEQLLQLVNELSARLDSAESEIKELRKRSDASIPEDVIIA FT ISAAVSAFLGNRGKIKAVKYSRHRTWAAQGRQSVQHHIPGTL" FT CDS 718417..718785 FT /transl_table=11 FT /locus_tag="DIP0742" FT /product="Putative decarboxylase" FT /note="Similar to Propionibacterium freudenreichii FT shermanii biotin carboxyl carrier protein of FT methylmalonyl-CoA carboxyl- transferase SW:BCCP_PROFR FT (P02904) (123 aa) fasta scores: E(): 2.6e-15, 49.18% id in FT 122 aa" FT /protein_id="CAE49264.1" FT /translation="MKLNVTVNGIAYSVEVEVEEEKRQIAPIYFGGGSGGGATHSEPAT FT ASVSGVSANAVVAPLAGSVFKILVEEGEEIEAGQVLLILEAMKMETEITAPNAGKVGSI FT RVEVGESVQGGQALVTID" FT misc_feature 718576..718779 FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme" FT misc_feature 718648..718701 FT /note="ScanRegExp hit to PS00188, Biotin-requiring enzymes FT attachment site." FT CDS 718856..720079 FT /transl_table=11 FT /locus_tag="DIP0743" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49265.1" FT /translation="MHSAFAHLGERYSGHLIFYRTRGYIGEIVVVIHFHNPREGSSNLM FT RHLCFSRLYRPLLFAAATTGAAFFAGPLAYADEVQSTPLPVTQPQPAPTLTQTVTSMVN FT SWGIPTPAIDPQIAAAVDTLAQQVQAFVAPVMPYADPQVAAPAPERHAVAQRPVDGPNY FT HWTNDPVSQVMAQKPGPVLHRVQGSWFNAPDIPEESLQAQAQGASLYGPGTPIYVGKDR FT LCTVGASGYDADGRKIAITAGHCGNVGDAVSSADSWQVGPSGTVVAKGSNLDYAVVELG FT SNAQVTQNYNNIRVNSVGGPMPVTGNTACKQGIATGFSCGLVWNHDHRTTASQVCAMQG FT DSGAPMLVGDRVVGIINGGMIPNVNYPCTTPWQGPFFVPTISTNMDAIVSDLNSKKSVG FT HGFRLANS" FT misc_feature 719573..719590 FT /note="ScanRegExp hit to PS00134, Serine proteases, trypsin FT family, histidine active site." FT CDS complement(720098..720886) FT /transl_table=11 FT /locus_tag="DIP0744" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 27.7 kDa protein Rv3137 or MTCY03A2.21c TR:P95189 FT (EMBL:Z83867) (260 aa) fasta scores: E(): 1.4e-65, 63.42% FT id in 257 aa" FT /protein_id="CAE49266.1" FT /translation="MSYHDDLAFALQLADAADAITLARFAASDLKVSSKPDMTPVSDAD FT IATERELRDLIAQRFPEDAILGEEFGGTAEFTGRQWIIDPIDGTKNYVRGVPVWATLIA FT LLVDGHPVVGVVSAPAIAHRWWAAQGEGAWRSNPAQESRRIHVSNVAQLTDASVSFSSL FT DGWKERGLLNNFVALSDETWRLRGFGDFFSYCLVAEGAVDIAAEPEVSLWDLAPLSILV FT EEAGGVFSSLDGALGPHGGNALATNGLLHDEVRTMLTSSR" FT misc_feature complement(720113..720883) FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family" FT misc_feature complement(720206..720250) FT /note="FPrintScan hit to PR00377, Inositol FT phosphatase/fructose-1,6-bisphosphatase family signature" FT misc_feature complement(720206..720262) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(720266..720313) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(720602..720661) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(720605..720646) FT /note="ScanRegExp hit to PS00629, Inositol monophosphatase FT family signature 1." FT misc_feature complement(720614..720649) FT /note="FPrintScan hit to PR00377, Inositol FT phosphatase/fructose-1,6-bisphosphatase family signature" FT misc_feature complement(720668..720718) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT CDS complement(720943..721815) FT /transl_table=11 FT /locus_tag="DIP0745" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhizobium loti FT myo-inositol-1-monophosphotase MLR4874 TR:Q98D39 FT (EMBL:AP003005) (264 aa) fasta scores: E(): 1.9e-18, 32.92% FT id in 243 aa, and to Streptomyces spectabilis FT myo-inositol-1-monophosphotase SpcA TR:Q9L630 FT (EMBL:AF244574) (265 aa) fasta scores: E(): 3.8e-14, 31.59% FT id in 269 aa" FT /protein_id="CAE49267.1" FT /translation="MENSSDPRTQSAATASLSEMIATITKTFIIAHVDDSDEHLAQALV FT YNAGRLAWRMREQGVHTDYKTSLSDVVTDADRAAEEFVSGVLTTLRPEDGIVGEEGATR FT NSTSGRTWVIDPVDGTYNFVNGSDFWCSALALIEGEPEDPTSVIFGAVHRPAMGYTWFG FT GPEIPTTCDGQPVAKLENKSTELINFATYLNPPCLQQPEIVTRWLTIAQAFLSWRMMGS FT GSVELANVADGTIGAYVQHSVKDWDWLPGRALVEGAGGKCIKVESGGVTWSIASNPQAT FT DEVAAMLSR" FT misc_feature complement(721036..721092) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(721096..721143) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(721327..721719) FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family" FT misc_feature complement(721438..721497) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(721441..721482) FT /note="ScanRegExp hit to PS00629, Inositol monophosphatase FT family signature 1." FT misc_feature complement(721504..721554) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT CDS 721938..723047 FT /transl_table=11 FT /gene="prfB" FT /locus_tag="DIP0746" FT /product="peptide chain release factor 2" FT /note="Similar to Streptomyces coelicolor peptide chain FT release factor 2 PrfB or SCE59.31c SW:RF2_STRCO (Q53915) FT (368 aa) fasta scores: E(): 1.3e-88, 66.94% id in 357 aa, FT and to Bacillus subtilis peptide chain release factor 2 FT PrfB SW:RF2_BACSU (P28367) (366 aa) fasta scores: E(): FT 2.8e-56, 43.64% id in 362 aa" FT /protein_id="CAE49268.1" FT /translation="MRPETQSAVTQLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLW FT DDPDTAQKVTTELSSVQAKLKKLSTLRQRIDDLPVMYELADEEGEDALALADEELAELT FT ADVEALEVKTMLSGEYDSREAVINIRSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIY FT DISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPV FT VEQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNK FT ASAMRVLQAKLLERKRQEERAELDALGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVN FT DPQKVLDGDIDGLLEAGIRWRMAEQQGQN" FT misc_feature 722601..722939 FT /note="HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase FT domain" FT misc_feature 722661..722711 FT /note="ScanRegExp hit to PS00745, Prokaryotic-type class I FT peptide chain release factors signature." FT CDS complement(723044..724642) FT /transl_table=11 FT /locus_tag="DIP0747" FT /product="Putative membrane protein" FT /note="Similar to Neisseria gonorrhoeae putative efflux FT pump component MtrF TR:Q9RNX1 (EMBL:AF176821) (522 aa) FT fasta scores: E(): 2.4e-35, 40.03% id in 527 aa, and to FT Escherichia coli aminobenzoyl-glutamate transport protein FT AbgT or B1336 SW:ABGT_ECOLI (P46133) (510 aa) fasta scores: FT E(): 1.7e-28, 34.72% id in 527 aa" FT /protein_id="CAE49269.1" FT /translation="MSTTTPPHKTAPSGFLGKIEQLGNRLPDPFWIFAFLAIIVAISSW FT IGSAIGMTAVNPQDGSTVEVTNLLTKEGATKMVSEAVNNFVAFPPLGVIITVMLGVSVA FT EHSGFISALVRAMVAKVGPKTLTYVVALAGVTGSIASDAVYVILIPLGAMSFRALGRSP FT IVGAMVAFAASSAGFNASLILNITDVLLSGISTSAAQLVDPEYHVSPLANYFFVVASSL FT VLALIITAVTELFVKNRARQLVDHDHIDHSELSFRDDDHPDLGAKTDEELAEEIALHSG FT EIRALTIAGVAFIGMLAVYFALLFVPASPFYSEESAMSSPLVKAVTVPISLMFLGLGVV FT YGITIKSITSLGDIPAFMAKGLTTLIPMVVLFFMVAQFLAWFQWSNLGIWTAIKGAELL FT QRWDLPVYVLFAAVVLAVALLNLTITSGSAQWALMAPVIVPMMMYVGISPEVTQMLFRI FT GDSPTNIITPMSPYFALALTFLQCYYKPAGVGTLVSLALPYSIAMLVGWFAFFIVWYAL FT GIPLGLGTPMHFQQG" FT misc_feature complement(order(723086..723151,723191..723247, FT 723278..723343,723365..723430,723491..723556, FT 723608..723673,723719..723784,723935..724000, FT 724091..724156,724196..724261,724334..724399, FT 724487..724552)) FT /note="12 probable transmembrane helices predicted for FT DIP0747 by TMHMM2.0" FT CDS 724821..725510 FT /transl_table=11 FT /gene="ftsE" FT /locus_tag="DIP0748" FT /product="Cell division ATP-binding protein" FT /note="Similar to Streptomyces coelicolor cell division FT ATP-binding protein FtsE TR:Q9L1S6 (EMBL:AL138851) (229 aa) FT fasta scores: E(): 2.6e-43, 61.06% id in 226 aa, and to FT Escherichia coli cell division ATP-binding protein FtsE or FT B3463 or Z4837 or ECS4312 SW:FTSE_ECOLI (P10115) (222 aa) FT fasta scores: E(): 5.9e-26, 43.36% id in 226 aa" FT /protein_id="CAE49270.1" FT /translation="MITFDNVTKLYKTSTRPALNNVSLTINKGEFVFLIGPSGSGKSTF FT LQLMIREENLTSGDLYLSDFHVNKLRGRQINKLRQNIGYVFQDFRLLQQKNVYDNVAFA FT LEVIGTRKARIDKLVPETLELVGLSGKANRMPHELSGGEQQRVAIARAFVNRPLLLLAD FT EPTGNLDPETSDGIMVLLNQINKTGTTVVMSTHNARAVNDMRRRVIELNLGTLVRDDAH FT GVYGEAQ" FT misc_feature 724902..725465 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 724905..725462 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 724911..724973 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 724926..724949 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 725235..725279 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 725235..725450 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 725527..726429 FT /transl_table=11 FT /locus_tag="DIP0749" FT /product="Putative cell division protein" FT /note="Similar to Mycobacterium leprae cell division FT protein FtsX homolog or ML0670 or MLCB1779.20c FT SW:FTSX_MYCLE (O32882) (297 aa) fasta scores: E(): 3.4e-41, FT 41.19% id in 301 aa, and to Escherichia coli cell division FT protein FtsX or FtsS or B3462 SW:FTSX_ECOLI (P10122) (352 FT aa) fasta scores: E(): 3.5e-06, 25% id in 240 aa" FT /protein_id="CAE49271.1" FT /translation="MKLGFVFREAFRGLGRNITMTIALIITTAISLALLATGFLVTNMT FT KETKDIYLDRVEVMVQLNENISANDKDCSSQACRDVRDKLDGADGIETVTYRSRQQSYD FT RFVEVFKDTDPQLVAETSPDALPAALHVRLEDPLDTKPLDQVRDMEQVDTIVDQVDDLR FT GATDNLDAIRNSTFIFAAIQAIAAIFLIVNMVQIAAFNRREEISIMRMVGASRWYTQAP FT FVIEAMVAALFGAILSGLALFGGKVWVVDKTLKGLYDSQLIARVSNADIWAVAPVVAVI FT GIIFAAITAQATLRWYVRK" FT misc_feature 725527..725667 FT /note="Signal peptide predicted for DIP0749 by SignalP 2.0 FT HMM (Signal peptide probability 0.961) with cleavage site FT probability 0.352 between residues 47 and 48" FT misc_feature order(725584..725652,726055..726123,726208..726276, FT 726337..726405) FT /note="4 probable transmembrane helices predicted for FT DIP0749 by TMHMM2.0" FT misc_feature 725797..726405 FT /note="HMMPfam hit to PF02687, Predicted permease" FT CDS 726536..727027 FT /transl_table=11 FT /gene="smpB" FT /locus_tag="DIP0750" FT /product="SsrA-binding protein" FT /note="Similar to Mycobacterium leprae SsrA-binding protein FT SmpB or ML0671 or MLCB1779.19c SW:SSRP_MYCLE (O32881) (160 FT aa) fasta scores: E(): 2.7e-40, 62.42% id in 157 aa, and to FT Escherichia coli SsrA-binding protein SmpB or SmqB or B2620 FT or Z3913 or ECS3482 SW:SSRP_ECOLI (P32052) (159 aa) fasta FT scores: E(): 2.1e-20, 44.72% id in 161 aa" FT /protein_id="CAE49272.1" FT /translation="MAKKKKAKNSNPVIASNRKARHDYKILDTFECGIVLLGTEIKSIR FT EGKVSLTDSFATIDEGEAWIRNLNIPIYSRGSWTNHSPMRTRKLLLHRREIDSLMGKVR FT DGNKTLVPLSLYFKEGRLKVELGLAQGKQDYDKRQDIKRRTEEREVVRDLGRRVKGIHA FT " FT misc_feature 726569..726772 FT /note="HMMPfam hit to PF01668, SmpB protein" FT misc_feature 726572..726766 FT /note="BlastProDom hit to PD004488, PD004488" FT misc_feature 726629..726667 FT /note="ScanRegExp hit to PS01317, SSRA-binding protein." FT CDS 727065..727256 FT /transl_table=11 FT /locus_tag="DIP0751" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49273.1" FT /translation="MLFYSYSLYGDPTVEAPTGLILVSTACIKLGEACRCRLETTDFKR FT RSKYISAENTQRDYALAA" FT CDS 727618..728997 FT /transl_table=11 FT /locus_tag="DIP0752" FT /product="IS element transposase" FT /note="Similar to Escherichia coli possible transposase of FT IS1353 YahA TR:Q9WTH9 (EMBL:AP000342) (514 aa) fasta FT scores: E(): 2.6e-62, 41.595% id in 464 aa, and to FT Escherichia coli putative transposase InsK for insertion FT sequence element IS150 or B3558 SW:INSK_ECOLI (P19769) (283 FT aa) fasta scores: E(): 2.7e-35, 38.628% id in 277 aa" FT /protein_id="CAE49274.1" FT /translation="MNRSYTNTQKRTALRVYKRTQSVTKTVRELGYPGRWTLYKWLREP FT KTPPQPRKQAKTLTHYPYEVKLRAVELFHNGWRPADIAQECCLHTHASVYAWAQRYREE FT GQWGLMSKKERAGHGRIPTKAALEKSLPDNPTQLKQQMATLLVEKAVLEKELEIIKKDV FT SVIPGQLSNKHKTDVVDALRSTFPLAMLLAASGLAASSFYYHLKKRRMPDKHAAIRSMV FT HRISSDSHNTYGYRRIWWQLRHLGITISEKVVRRLMREEAITVRFPKRKVKYSSYQGEI FT SPAPPNLVNRCFHATAANTLWLTDISVFAANEGRVYLSVIIDCFDGKVVAAKTSVNPTM FT ELAESTLQAAIDAEGLPPDGSLVIHSDRGVHYRGRSWHSLTAKYGIVRSMSKKGCSPDN FT AACEGFFGRMKNEMYYGKRWQTIQELDDAIAAYIEFYNNHRIKVSLNGMSIARYRMAAV FT A" FT misc_feature 727618..742674 FT /note="Anomalous G+C content (50.90%) and dinucleotide FT signature. Possible lantibiotic biosynthesis cluster - FT pathogenicity island. Not present in C.glutamicum" FT misc_feature 728497..728979 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS 729107..732040 FT /transl_table=11 FT /locus_tag="DIP0753" FT /product="Putative lantibiotic modifying enzyme" FT /note="Similar to Staphylococcus aureus lantibiotic FT modifying enzyme TR:Q9S4D1 (EMBL:AF147744) (965 aa) fasta FT scores: E(): 5.3e-32, 21.471% id in 1006 aa, and to FT Lactococcus lactis Plasmid pMRC01 lacticin 481/lactococcin FT biosynthesis protein LcnDR2 TR:O87238 (EMBL:AE001272) (980 FT aa) fasta scores: E(): 2.6e-16, 21.221% id in 999 aa" FT /protein_id="CAE49275.1" FT /translation="MLVGSIRKFFPEITDDLFQELLTSAAYEHGVASLQGEIEKFTQKN FT SETDEEVLADNLAELYRFFEREPIPFLDSTWALSDLQISSIRDVIDAFPHRIDCDAVIK FT SFVSANCSALQRLLLRCQLEFVEKEISSNGPELTYEESSQALFRSLAQFKERYPIAWYL FT ANRKCERSLRYLSEILDHLKEDWSRLSRFGLTEDSQVSNITFELGDTHDGKSVAVVTLD FT DGQQIFHKPRPLDVEESCSRFAEQLGRMFGFTCPFVGKVITRGSYGWAEHVPHVEESRF FT DNPRAAAEFALLLKLLSFTDVHYENVRFSADGIPILVDAETALTSGLCRRDSEGIPIHA FT ALSETVTSTGFFPSPLVIPKKRGETFVDVGVLGRRDKNLITERQLVLKNPFTNKMHLVY FT EDVAKHMSDNASSFRFSSDYVRSLTERYRELTKAVVDKKASISNLLRECFSKSCFRVVV FT QDTIKYVNAIQLATNQQCLSSPSLYVGALLRFAIGRFDSDRLLLRNELASLISGDIPRY FT VVSATSSDLEGSVQTVKKNYFIESPIENAIGCVQKMDSKTIELDCWLIEISFASYYDES FT SNATQFKYSDSLFNVSHNIEVSLNEALTSLLNGYVYGSGSAPATWIGARLSNQAHQYWY FT VDEVSMDLYAGSSGLALPLVLSGPAGLSCRGRKEAHDYFDGLVTKLESLDTTQLATLNT FT GALSGAHSVLWSLHCHYSAAGDNGGLERLKSLANKMISCASHDGFDFTGGTIGLSVLAK FT ALGVFESTKIEDDYLNALDSLAESTSRGCSWLSGYAHGHAGALASAAMLCDHISNRDRL FT ESSVSRLFSQFLSFRESESRLWPIGFEQTGIGRGWCSGTPGVLLALAQFHESELGKCYE FT LAPTIEFLTDVVKKETFGGNPTLCHGDVGNLWILQKVGELIGDHALVTRSREAGLFWLQ FT NVLPSFLRSLSRFSISHSFFAGIAGTALYGEYLLSSEEVVRCPLWLE" FT misc_feature 729728..729751 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 730271..730285 FT /note="Putative sortase B anchoring signal. NPQTN - NPFTN" FT CDS 732028..734160 FT /transl_table=11 FT /locus_tag="DIP0754" FT /product="Putative lantibiotic ABC-transport system FT membrane protein" FT /note="Similar to Staphylococcus aureus transporter FT TR:Q9S4D0 (EMBL:AF147744) (720 aa) fasta scores: E(): FT 2.4e-57, 29.986% id in 707 aa, and to Lactococcus lactis FT cytolysin B transport protein TR:O87239 (EMBL:AE001272) FT (708 aa) fasta scores: E(): 7.1e-55, 28.571% id in 714 aa" FT /protein_id="CAE49276.1" FT /translation="MVRVRPSCQVAQSDCGLACVHMLIQSFGISASLRKMRVTYAPGRD FT GLSLRALTQILSDFGLNSKVVKCSYSNLSRVPLPAIIAWEPAHYVVLEKRLGDSWRIVD FT PSSGRRWCSKKEIEANFRSFCVTGARGNTKVSEGQVSDDPSWKSLAVLLAGKAFLLLPI FT LLGVILVTGVTVAVPQITGWLVKQLGGMDQASIIAVIVSLAFGFILVHLLNTAINSVAS FT TTISKRLTEIIYYTLLRAPLSYFNIRPRGELLYRVSLIKKLESFVSGVLPKLFVGSVAG FT IGCLIYICVLDFRSFFLLLAATLIYLGAFNFSQRQIRKLSDEQNSEDSLANSVLVDSIS FT SIQEVKAGGHEEKIFESWAAHNAKVVSLERKKLFLRGSISSLVNAIQTFLPVVIFLTNL FT FSSFGPDALGQAVQLQLLATVFLAQVTMIVEMGAEIGETSSALRRVDDLVNYMDAPMFS FT PDASSQFQLPVRLESVSFRYGAFAKDSVSDISIEIGEQRRIAVVGKTGCGKSTLAKLIG FT GLLLPTSGSIEANGVRLRSVSQSSFYDCVAYVPQDSSLRNATLRDNLSWGNEHTDADLV FT RCLELAQFRLDPNLFPQGLQTMLINGGQNISGGQRQRICIARALLKEPRLLILDEATSG FT LDQRTEASLYESLSRLGCAFVTITHRLETIRDFDEIVVLDQGIVVEKGSFESLLEGGGL FT FSKMYFAYQESTKDGL" FT misc_feature 732460..733302 FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature order(732499..732567,732610..732678,732823..732891, FT 732904..732963,733144..733212) FT /note="5 probable transmembrane helices predicted for FT DIP0754 by TMHMM2.0" FT misc_feature 733510..734079 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 733513..734058 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 733519..733596 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 733534..733557 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 733843..733887 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 733843..734049 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 734160..735038 FT /transl_table=11 FT /locus_tag="DIP0755" FT /product="Putative lantibiotic ABC-transport system, FT ATP-binding protein" FT /note="Similar to Bacillus subtilis SpaF TR:Q45404 FT (EMBL:U09819) (247 aa) fasta scores: E(): 2.2e-22, 42.991% FT id in 214 aa, and to Corynebacterium jeikeium BlsD FT TR:AAK94047 (EMBL:AF401314) (301 aa) fasta scores: E(): FT 2.5e-22, 33.106% id in 293 aa" FT /protein_id="CAE49277.1" FT /translation="MIKVSCLQKKYGDIRALEDVSLTVETGQIVGFVGPNGSGKSTTLR FT IIAGLEKADSGDCTVDGVEAGKLADPWSKLATLLDRQGVNGELTAMHAMSALGAAYGVP FT SERIMSLIGTVGLDHARHRRVKSFSLGMKQRLNIALALLAEPSYLILDEPMNGLDPDGI FT LWLRDFLSNYRNQGGGVLLSSHTLSEVEIISDVFVIIKNGQTVWTGTKEKLVSGTTTHV FT TAQQQSVLVDALKRLDYAFEIVANGIFVKEVSPVVLGPKLVNLGVPITCLKEVDRSLED FT VYLSFSSEGGK" FT misc_feature 734235..734768 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 734238..734768 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 734244..734309 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 734259..734282 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 734427..734459 FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT misc_feature 734541..734585 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 734541..734756 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 735038..735835 FT /transl_table=11 FT /locus_tag="DIP0756" FT /product="Putative lantibiotic ABC-transport system FT integral membrane protein" FT /note="Similar to Streptomyces coelicolor putative ABC FT transporter integral membrane protein SCE8.16c TR:Q9Z4W1 FT (EMBL:AL035654) (264 aa) fasta scores: E(): 0.0032, 26.695% FT id in 236 aa, and to Corynebacterium jeikeium BlsC FT TR:AAK94048 (EMBL:AF401314) (247 aa) fasta scores: E(): FT 0.81, 21.116% id in 251 aa" FT /protein_id="CAE49278.1" FT /translation="MADVKYRSSTLSDFRLQMIVFKGSRSARLLIYTGLVIMFAIAIAV FT SYSISLSYSKGEPLEDVSFLYEIPLFGFSFAQIFFGAAIIAYICAEWGSGFIYTTFGAS FT RRPARFIASKLFWPLAFSLSTFFVILMAIIPLEGILVSHDTPYTITLADATVWRQILVA FT CFNLATSVLFAGGLAFIFRHAASAIGSYIAISLIAPIVFGLIPLDISKTISSWLPNNVY FT GYLITQDPVMTGTLNYPLLFCAAIAYPVISVLVGFVRFKRNVV" FT misc_feature order(735122..735190,735260..735328,735386..735454, FT 735512..735580,735599..735667,735749..735817) FT /note="6 probable transmembrane helices predicted for FT DIP0756 by TMHMM2.0" FT CDS complement(736001..736267) FT /transl_table=11 FT /locus_tag="DIP0757" FT /product="IS element transposase (partial)" FT /note="Similar to part of Yersinia enterocolitica FT IS1222-like transposase TR:Q9X9I1 (EMBL:AJ132945) (165 aa) FT fasta scores: E(): 5.3e-08, 40.625% id in 64 aa, and of FT Xanthomonas campestris insertion element IS476 hypothetical FT 39.2 kDa protein SW:YI61_XANCA (P25438) (346 aa) fasta FT scores: E(): 3.3e-06, 34.722% id in 72 aa. Also similar to FT the C-terminal region of DIP0760, Putative transposase FT (pseudogene) (361 aa) fasta scores: E(): 9.6e-27, 80.000% FT identity in 70 aa overlap" FT /protein_id="CAE49279.1" FT /translation="MPWHNGFVESFHNRLRDKLLENEMFDDPAHASSCLRLWQERYNNY FT HPHSSLGFIPPTEYANQWHQTQEGTQTPGHKNQSAPTSRMQTD" FT misc_feature complement(736085..736264) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS complement(736323..>736553) FT /transl_table=11 FT /locus_tag="DIP0757A" FT /product="IS element transposase (partial)" FT /note="Similar to part of Salmonella typhimurium LT2 FT putative integrase core domain STM2764 TR:AAL21650 FT (EMBL:AE008826) (155 aa) fasta scores: E(): 0.94, 36.36% id FT in 44 aa" FT /protein_id="CAE49280.1" FT /translation="GCVGTGLCSLIATHQGKAFTICNVIDEFTREHGGFEVGRSITASV FT VIDLLENLAAVRGWQTFRCCVWITAPGVHKR" FT CDS 736810..737148 FT /transl_table=11 FT /locus_tag="DIP0758" FT /product="Putative transposase (partial)" FT /note="Similar to part of Mycobacterium ulcerans probable FT transposase Tnp TR:Q9ZG97 (EMBL:AF082836) (444 aa) fasta FT scores: E(): 1.5e-08, 50% id in 82 aa" FT /protein_id="CAE49281.1" FT /translation="MSDMTDMLEDEMIDPVTGEIIDQKDLAERLLAQAKEQGVSLVGPG FT GLLNQLTKNVLETALNAELTEYLGHEHGETPLGSNMRNGPRTKTVLTVESGRFRSRSRG FT TVTGRSSR" FT misc_feature 736870..737085 FT /note="HMMPfam hit to PF00872, Transposase, Mutator family" FT CDS join(737302..737583,737656..738459) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0759" FT /product="Putative transposase (pseudogene)" FT /note="Pseudogene. Similar to Xanthomonas axonopodis pv. FT dieffenbachiae transposase TR:Q9F822 (EMBL:AF263433) (363 FT aa) fasta scores: E(): 2.7e-23, 33.42% id in 365 aa. FT C-terminal region also similar to DIP0757, IS element FT transposase (partial) (88 aa) fasta scores: E(): 3.9e-23, FT 80.000% identity in 70 aa overlap" FT misc_feature 737314..737580 FT /note="HMMPfam hit to PF01527, Transposase" FT misc_feature 737380..737445 FT /note="Predicted helix-turn-helix motif with score 1667 FT (+4.86 SD) at aa 27-48, sequence STVAEVCRELGISEATYHRWQR" FT misc_feature 737935..738414 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS complement(738682..739023) FT /transl_table=11 FT /locus_tag="DIP0761" FT /product="Conserved hypothetical protein" FT /note="Similar to Methanothermobacter thermautotrophicus FT hypothetical 11.0 kDa protein MTH1452 TR:O27501 FT (EMBL:AE000906) (99 aa) fasta scores: E(): 2.8e-10, 41.48% FT id in 94 aa" FT /protein_id="CAE49283.1" FT /translation="MSAETPASPALGFINNLANEIEYASGSTVSKTLLRAEGVNVVLFS FT FDAGEELSEHTAAMPVLVETLEGELEITAEGKTVTLLPGGVVHFTTRLPHAVKAIKPSK FT MVLYMLARP" FT CDS complement(739057..739860) FT /transl_table=11 FT /locus_tag="DIP0762" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 29.5 kDa protein Rv2622 or MTCY01A10.10c TR:O06190 FT (EMBL:Z95387) (273 aa) fasta scores: E(): 2.9e-44, 50.96% FT id in 259 aa" FT /protein_id="CAE49284.1" FT /translation="MDYSSSLPQSDRSTSTAAGHWVLARAGKRVLRPGGLKLTKRMLSA FT ADMQGKEIVEFAPGLGRTAQLIVTEGVSSYVGVDQDSAAVARVEAIVKPHGGTVINAKA FT HDTGLSGESAEVVVGEAMLTMQGEKAKAEIVAEAFRLLKPGGYYAIHELGLTPNDIDPE FT LADGLRKQLAQTIRVNARPLTENEWRTVLTNAGFEVEWISFAPMALLSPKRNLADEGFL FT GVVRIIRNLIRDKALRARVFQMRSTFNKYRDHLTGIAIVAKKPSN" FT misc_feature complement(739399..739521) FT /note="ProfileScan hit to PS50124, Generic FT methyl-transferase profile." FT CDS complement(join(739982..740233,741767..742375)) FT /pseudo FT /transl_table=11 FT /gene="tnpB" FT /locus_tag="DIP0763" FT /product="transposase B (pseudogene)" FT /note="Pseudogene. Similar to Corynebacterium jeikeium FT transposase B TnpB TR:Q93SI6 (EMBL:AY033500) (294 aa) fasta FT scores: E(): 6.7e-46, 55.29% id in 293 aa, and to FT Corynebacterium glutamicum IS3 related insertion element FT TR:Q46069 (EMBL:X69104) (298 aa) fasta scores: E(): FT 3.1e-45, 56.56% id in 297 aa" FT /db_xref="PSEUDO:CAE49285.1" FT misc_feature complement(740012..740212) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT repeat_region complement(740272..740296) FT /note="Possible inverted repeat" FT CDS complement(740277..741590) FT /transl_table=11 FT /locus_tag="DIP0764" FT /product="Putative transposase" FT /note="Similar to Escherichia coli transposase InsI for FT insertion sequence element IS30B/C/D (InsI1 or B0256) and FT (InsI2 or B1404) and (InsI3 or B4284) SW:INSI_ECOLI FT (P37246) (383 aa) fasta scores: E(): 7.2e-19, 37.94% id in FT 390 aa" FT /protein_id="CAE49286.1" FT /translation="MQRQFWGLIATGITTAQAALQVGVSVPVGTRWFRHAGGMRPLALD FT EPSGRYLSFAEREEIAILWEKQTGVREIARRIGRNPATISRELRRNAATRGGKQIYRVG FT VAQWKAQEAAKRPKQAKLVDNPRLRDYVQERLAGTVRDENGVVMAGPDTPAWKGRSKPH FT RADRRWLTAWSPEQISQRLRIDFPDDESMRISHEAIYQALYIEGRGALKRELVAALRTG FT RALRKPRARSKSKPKGHVTADVVISNRPPEASDRAVPGHWEGDLIIGTGRSAIGTVVER FT YSRSILLVHLPRLDGWGEQPRTKNGPALGGYGAEAMNTALQTVMKDLPLQLRQTLTWDR FT GTELADHAAFTLATGTKVFFADPHSPWQRPTNENSNGLLRQYFPKGTDLSRWTAQDLAA FT IAYTLNNRPRKVLGFRTPAEVFNEQLQSIQNNSVATTD" FT misc_feature complement(740316..741425) FT /note="BlastProDom hit to PD002997, PD002997" FT misc_feature complement(740325..740831) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT misc_feature complement(741489..741554) FT /note="Predicted helix-turn-helix motif with score 1647 FT (+4.80 SD) at aa 13-34, sequence ITTAQAALQVGVSVPVGTRWFR" FT misc_feature complement(741537..741590) FT /note="Signal peptide predicted for DIP0764 by SignalP 2.0 FT HMM (Signal peptide probability 0.791) with cleavage site FT probability 0.621 between residues 18 and 19" FT repeat_region complement(741740..741764) FT /note="Possible inverted repeat" FT misc_feature complement(741770..741997) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS complement(742372..742674) FT /transl_table=11 FT /gene="tnpA1" FT /locus_tag="DIP0766" FT /product="transposase A" FT /note="Similar to Corynebacterium jeikeium transposase A FT TnpA TR:AAK51146 (EMBL:AY033500) (103 aa) fasta scores: FT E(): 8.1e-16, 56% id in 100 aa" FT /protein_id="CAE49287.1" FT /translation="MSKFYSEQFKRDAVALYENNENLSLAAAAAELRVNRASLHQWKKE FT LGTGKRTRMIEAKAQAEAASDAERIRALEKENAKLREERDILRKAAKYFAEETSW" FT misc_feature complement(742390..742668) FT /note="HMMPfam hit to PF01527, Transposase" FT misc_feature complement(742543..742608) FT /note="Predicted helix-turn-helix motif with score 1456 FT (+4.15 SD) at aa 23-44, sequence LSLAAAAAELRVNRASLHQWKK" FT rRNA 743383..744774 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT /note="EMBL:X82059" FT rRNA 745234..748318 FT /gene="23S rRNA" FT /product="possible 23S ribosomal RNA" FT rRNA 748458..748578 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT /note="EMBL:X55255" FT stem_loop 748598..748644 FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT CDS complement(join(748993..749160,749153..749716, FT 749718..749831)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP0768" FT /product="Putative aminotransferase (pseudogene)" FT /note="Pseudogene. Similar to Mycobacterium tuberculosis FT CDC1551 aminotransferase, class I MT0881 TR:AAK45122 FT (EMBL:AE006976) (397 aa) fasta scores: E(): 6.1e-44, 45.9% FT id in 305 aa. Presents frameshifts at residues 38 and 226" FT /db_xref="PSEUDO:CAE49288.1" FT misc_feature complement(749002..749034) FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT misc_feature complement(749171..749242) FT /note="FPrintScan hit to PR00753, FT 1-aminocyclopropane-1-carboxylate synthase signature" FT misc_feature complement(749276..749350) FT /note="FPrintScan hit to PR00753, FT 1-aminocyclopropane-1-carboxylate synthase signature" FT misc_feature complement(749498..749560) FT /note="FPrintScan hit to PR00753, FT 1-aminocyclopropane-1-carboxylate synthase signature" FT CDS complement(749836..750483) FT /transl_table=11 FT /locus_tag="DIP0771" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49289.1" FT /translation="MAHFSFPIDADFAAKNNELLKDTKRLQLSAGLFGIIQILIGVGLY FT FWLGGAFGIICLAVFAIMALISFAMIFVVPKQVGNAQHLYDNYDLVPAMIAEVNPRDMV FT VMALVNTNVDPTLPPRWALATRNITAIPGIEGDTRKVGTRIPAVAVTGQRSVGNQDSWD FT QISPMPIAWATPDSSVIARAESTIPSEQWTTLSKNLNKLDQVRETKFDLLEL" FT misc_feature complement(order(750262..750327,750340..750405)) FT /note="2 probable transmembrane helices predicted for FT DIP0771 by TMHMM2.0" FT CDS complement(750488..752152) FT /transl_table=11 FT /locus_tag="DIP0772" FT /product="Putative ATP-dependent DNA helicase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT ATP-dependent DNA helicase, putative MT0884 TR:AAK45125 FT (EMBL:AE006976) (542 aa) fasta scores: E(): 1.5e-161, FT 74.63% id in 544 aa" FT /protein_id="CAE49290.1" FT /translation="MVLGDGPLIVQSDKTVLLEVDHPRAQEARIALAPFAELERAPEHV FT HTYRITPLALWNSRAAGHDAEQVVHALETYSRFPVPQALLIDVAETMSRYGRVRLHKHP FT AHGLILESEEPAILAELLRHKKIKPMLGARIDDESIIVHPSERGRLKQELLKVGWPAED FT LAGYVDGEAHPVALSTEHEQWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAAAMA FT KAQATTLILVTNTVAGRQWRDELLRRTTLTPEEIGEYSGEKKEIRPITIATYQVVTRKT FT KGEYRALELFDSRDWGLIIYDEVHLLPAPVFRLTSDLQSRRRLGLTATLVREDGREGDV FT FSLIGPKRYDAPWKDLETQGFIATAECTEVRTTMTESERMVYATAENQDRYRLAACAAS FT KLRAVDKLVAQHTGQPTLIIGAYVDQLAEIGERLHTPVVDGSTSNKKREELFSAFRNGE FT ITTLVVSKVANFSIDLPEAAVAIQVSGTFGSRQEEAQRLGRLLRPKADGAHAHFYTVVS FT RDSLDSDYAAHRQRFLAEQGYAYRIIDAADLPALTKD" FT misc_feature complement(750641..750718) FT /note="FPrintScan hit to PR00851, Xeroderma pigmentosum FT group B protein signature" FT misc_feature complement(750641..750883) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(750647..750961) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(751082..751609) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(752075..752137) FT /note="FPrintScan hit to PR00851, Xeroderma pigmentosum FT group B protein signature" FT CDS complement(752198..754516) FT /transl_table=11 FT /locus_tag="DIP0773" FT /product="Putative DNA-binding protein" FT /note="Similar to Mycobacterium leprae possible DNA-binding FT protein ML2156 TR:Q9CBE1 (EMBL:AL583924) (753 aa) fasta FT scores: E(): 1.2e-60, 33.5% id in 758 aa" FT /protein_id="CAE49291.1" FT /translation="MTSSNDSTSTTAIFRQWLHNLDEDALHRVLEHRPDTTHPLPPGIS FT SLAARLSLRASIMRALVRLNARELAVLEAASIAGAEIEPVDAPKLVELVRSYSEQNTHD FT TNRWAPSESELLATIDTLRDYALLFGELAALRIAPGVMDALPAGWQLLPSAHVPNATEL FT PEILEGLTTKQRSILHTLAQSGGTGVTKDAAIDADPSRPIPQLIALGLVTRHNSHTVTL FT PMSVRFALSGKPAPVLPLCPVAVSQEISSASRVEEQSTAAGLEAVRLTRVLIDVLSDSP FT IALLKDNAVGVRPVATLSRALDVEETTLYRVIAAAMGAGLIAKGVPDPLPTNDTGGDYL FT APTGRADEWNAQPLSVQWAWLMLGWWEHATLNVAAIGQPDEKNKPHRLLSAATISDKLP FT STRVLVLQSAASHVFPHGGDKGVLLANFGFDSPIRASRLARDVFDDITDSAQFLGILGP FT RWEPTTVLRLLAHNDHHVDLLGRLCEATASLTPAESDRLIPQGDMTILAPAPLPFEAHT FT MMALMSDTESMGLATVFRLNSTSVRRALDAGKTDSDLVGFLKDHTIGDLPQSLVYLISD FT TARRHGALRGGPALSYVRCDDPALLLEVSRIEAAADLGFRIIAPTVLIAQAPLAQVLET FT IRSAGFAPAAENAQGLSIDIRPHPTRVATPTVRPTMPQEDPAHIRQALLTLLRDRDASR FT GETHDIEGSDAVSVLHSAMRANHKVHVGIVDKQGQALRYTVTPVTITGGHVSAVDADSG FT EVIHFMLHRITEVALDSGA" FT misc_feature complement(753575..753640) FT /note="Predicted helix-turn-helix motif with score 1123 FT (+3.01 SD) at aa 293-314, sequence RPVATLSRALDVEETTLYRVIA" FT CDS 754535..754771 FT /transl_table=11 FT /locus_tag="DIP0774" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML2155 TR:Q9CBE2 (EMBL:AL583924) (74 aa) fasta scores: E(): FT 7.5e-08, 54.09% id in 61 aa" FT /protein_id="CAE49292.1" FT /translation="MVVQVTLASGFETIEPMSNMEKKGYVDPGWPKHVPGGGHAVTEMV FT AKVAGANSPWGDIEFPVPAEQTGYVHPYTRVNK" FT stem_loop 754891..754930 FT /note="Score 54: 18/18 (100%) matches, 0 gaps" FT CDS complement(754956..755579) FT /transl_table=11 FT /locus_tag="DIP0775" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative secreted FT protein SCE41.06c TR:Q9F2Q2 (EMBL:AL442120) (244 aa) fasta FT scores: E(): 5.7e-20, 56.3% id in 119 aa" FT /protein_id="CAE49293.1" FT /translation="MARHARKTASTKAKFAASTVAFGTAATLLAPTASAAPDSDWDRLA FT GCEAGGNWAINTGNGFFGGLQFTASTWNAYGGGQYAPTANGATREQQIAVAEKVLAGQG FT WGAWPACSAKLGLNSAPTPRDVVANAPAPVQAAVAGAQEYAAQAGLNTEELAVDALYNA FT IKVRLAGTGLGIPPQIEAFYQANRTNFNGFYMANRGAIDFIFSM" FT CDS 756260..756649 FT /transl_table=11 FT /gene="cspB" FT /locus_tag="DIP0776" FT /product="cold shock protein B" FT /note="Similar to Mycobacterium tuberculosis cold shock FT protein B CspB or Rv0871 or MTV043.64 TR:O53883 FT (EMBL:AL022004) (135 aa) fasta scores: E(): 8.9e-24, 52.23% FT id in 134 aa, and to Streptomyces coelicolor cold shock FT protein B CspB TR:Q9KXN2 (EMBL:AL357524) (127 aa) fasta FT scores: E(): 1.8e-19, 48.06% id in 129 aa" FT /protein_id="CAE49294.1" FT /translation="MPQGKVLWYDVDKGFGFVSNPEGDDCFVSKDVLPQGVQKLEKGQR FT VEFDYVARGRGPQALRIKVLDTPRLRRPAQHKYSAEELNSMISDLATLLEIKVQPSLRA FT GRYPDRKEGRQVANILRAVAKELDM" FT misc_feature 756260..756454 FT /note="HMMPfam hit to PF00313, 'Cold-shock' DNA-binding FT domain" FT misc_feature 756266..756454 FT /note="HMMSmart hit to SM00357, Cold shock protein domain" FT misc_feature 756269..756316 FT /note="FPrintScan hit to PR00050, Cold shock protein FT signature" FT misc_feature 756329..756358 FT /note="FPrintScan hit to PR00050, Cold shock protein FT signature" FT misc_feature 756371..756427 FT /note="FPrintScan hit to PR00050, Cold shock protein FT signature" FT stem_loop 756677..756738 FT /note="Score 68: 28/29 (96%) matches, 1 gaps" FT CDS complement(756756..757280) FT /transl_table=11 FT /locus_tag="DIP0777" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.8 kDa protein Rv0875c precursor or MT0898 or MTCY31.03c FT SW:Y875_MYCTU (Q10537) (162 aa) fasta scores: E(): 6e-05, FT 25.92% id in 162 aa" FT /protein_id="CAE49295.1" FT /translation="MASRKTRRKNLIQLLSLVIAVVVVVLCSIAFQSWWNNRPGPEPNT FT VTITVSSGDVSQNIIPFSVCEPGVPCDENEVPSIAVDKDGELKISVPKEVSDHDWSLLK FT IYDDPAANDQSFFGANEATEATVAGSVDPVRKKDDKRPRLVVAEVTSVLIGHDDQGVET FT PYTVTWSVSAK" FT misc_feature complement(757125..757280) FT /note="Signal peptide predicted for DIP0777 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.390 between residues 52 and 53" FT misc_feature complement(757176..757241) FT /note="1 probable transmembrane helix predicted for DIP0777 FT by TMHMM2.0" FT CDS complement(757267..758133) FT /transl_table=11 FT /locus_tag="DIP0778" FT /product="Putative secreted protein" FT /note="Similar to Deinococcus radiodurans glutamine FT cyclotransferase DR0112 TR:Q9RY39 (EMBL:AE001874) (294 aa) FT fasta scores: E(): 1e-28, 40.84% id in 284 aa" FT /protein_id="CAE49296.1" FT /translation="MQCMIDAMRSIVSLISHATVALAGSLAVAGCSLSPQPDHDTAATT FT PERLEARIHKVHRFDPQAFTQGLELDGDRLLVSTGFYGESGMFSMEVGNAPQQRTPLDP FT ELFGEGITKTGDHIWQLTWRDGIAFKRDATTFQQLGTVSYEGEGWGLCHFDDRVIMSNG FT SDELIIRDPESFDERSRIRVTNQGNGVSNLNELECVPNDPATGKDTIYANVFLSTDIMR FT IDATTGAVTGIIDASSIPNNAVADTNNVLNGIAWIPSSDRFYITGKRWPDLYEVTFVSK FT MSNHGQS" FT misc_feature complement(758008..758133) FT /note="Signal peptide predicted for DIP0778 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.713 between residues 42 and 43" FT CDS 758173..758937 FT /transl_table=11 FT /locus_tag="DIP0779" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 28.2 FT kDa protein ML2142 or MLCB57.29 TR:O33058 (EMBL:Z99494) FT (269 aa) fasta scores: E(): 5.4e-18, 43.55% id in 225 aa" FT /protein_id="CAE49297.1" FT /translation="MGDVSPRKKRMRSHTKRRKKGMPSTPLIGKNAVAVARRGLEELGE FT GAVGEHIGVQQVSLESATHRFAAEVPGYDGWEWNAVVACVPGSKYVTLSEVALVLGGSA FT LQPPRWVPYHERVRPGDLGPNDVMPPRDDDPRLTADERTAAMDFGTTKKLSKAGLNGTK FT VRWQNGAFGPQSEYAEKAKLPCYTCAFYVPMTDPVGKNFGVCTNEYSADGHIVHSRYGC FT GAHTDTPPVEPLGVVELQPFDDEHPVSVDTIS" FT CDS 759111..760598 FT /transl_table=11 FT /locus_tag="DIP0780" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCD12A.17 TR:Q9KXM3 (EMBL:AL357524) (485 FT aa) fasta scores: E(): 4.6e-64, 46.04% id in 493 aa" FT /protein_id="CAE49298.1" FT /translation="MASTAPQSQTSAPTASTSQPRSALDRYFKISERGSSVGTEVRAGV FT VTFFAMAYIIILNPLILGTGEDINGKVLGIPQVAAATALAAGVATIAFGLIARYPFGIA FT AGLGINTLVAVTMVATEGLSWEEAMGLVVLDGIIIVLLAISGFRAAVFSAIPKPMIAAM FT SVGIGMFIALIGLVDAGFVRRIPDAAHTTVPVGLGTGGSISSWPTLVFIMGLLICGFMV FT VRRVRGGLFLGIVVTTIIAMIVEAITGAGSSVDNPTGGWSLAVPTTPGGLGGLPDLSLI FT GDISLFGAFTRVGALGATLLLFTLVLANFFDAMGTMTALGKQAELVDDSGVLPDMKKAL FT IVEGTGAIIGGAASASSNTVYVDSAAGIADGARTGLANVVTGVLFLLAMFLTPLYEIVP FT IEAAAPVLVVVGALMIGQVRDIDFTDFHIALPAFLTIVIMPFTYSIANGIGVGFISFTL FT LAVFAGKIKQIHWIMWLISALFVVYFAMDPILNAIGS" FT misc_feature 759222..760463 FT /note="HMMPfam hit to PF00860, Xanthine/uracil permeases FT family" FT misc_feature order(759237..759305,759333..759401,759414..759470, FT 759498..759566,759585..759653,759711..759779, FT 759798..759866,759975..760043,760233..760286, FT 760299..760358,760395..760463,760521..760589) FT /note="12 probable transmembrane helices predicted for FT DIP0780 by TMHMM2.0" FT CDS 760677..761573 FT /transl_table=11 FT /locus_tag="DIP0781" FT /product="Putative methyltransferase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT tRNA/rRNA methyltransferase Rv0881 or MT0904 or MTCY31.09 FT SW:Y881_MYCTU (Q10543) (288 aa) fasta scores: E(): 2.5e-52, FT 53.16% id in 284 aa" FT /protein_id="CAE49299.1" FT /translation="MYLAGRVTNIVTVTSPDIHIEHLTDPLDPRLDDFRDLNHSDNRPD FT LPGGKGLVIAEGSLVIPRLVDSRFPVRCLVGFPNKLEKLLANVHLRAQLADVPVFSVDR FT ETLAQVAGFDMHRGLLASADRVAGMSIAQAIDGARTVVILEGVGDHENIGSMFRNAAGM FT GVDAVLFGNGCADPLYRRVVRVSMGHVLRTPFAHFGGKSTTWQRELQELRDAGFHIVSL FT TPNPQADHLADALVDANGAPYAKVALLVGAEGPGLTEHAMRATDQRARIPMASGTDSLN FT LATSAAIAFYERDRSLR" FT misc_feature 761091..761549 FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase family" FT misc_feature 761103..761564 FT /note="BlastProDom hit to PD001243, PD001243" FT CDS complement(761570..762466) FT /transl_table=11 FT /locus_tag="DIP0782" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49300.1" FT /translation="MENAPQHSAVVTLWFVTTAHPEAVIAASPRADRGFGRKLLAQMNS FT RWPITPIGQFSLNRSAQASTGEFYIAGFPGLSVIQTVITDARDISAIDSKLRGAIPAAD FT VYAFAVNPQSGLGAFAHWSGDTVKRAFSARRERVYEDTGLPEPFENAYWAGEKAEQIGG FT IALPFKPIDLVTEAQRYWLGFDIETAQDINVVAYAIDGRPEPKLVTHPNKKKLSADRIA FT HKASAKLGLGESRRDYDDYEEHEDSTTEVDLVRFADAAENTYRRTRRILSVASDVAVKK FT YRAFIHALRHTDKPSSD" FT CDS complement(762487..763536) FT /transl_table=11 FT /locus_tag="DIP0783" FT /product="Conserved hypothetical protein (putative FT DNA-binding protein)" FT /note="Similar to Mycobacterium leprae hypothetical 27.4 FT kDa protein ML2137 or MLCB57.36c TR:O33061 (EMBL:Z99494) FT (251 aa) fasta scores: E(): 1.4e-17, 33.45% id in 284 aa" FT /protein_id="CAE49301.1" FT /translation="MKELILVPTESSATSLVFHAADNPEEQFFLEVTDALRAALLHQED FT PDQPGDSENSVEEACAPSPNDDADVEVEVEDGSVEDDTPDDKTLSRPRGSLTTREPRPS FT REVDPRLSTPLSMRPREIQERIRSGATIAEIAEENGVTESRIEPYAHPVLLERARIAEL FT SKKSHPVRNDGPADLTLWEVLATAFAARGEDLTRSHWDAYRDPSGQWVVSVKWGPELGE FT TVAEWSYHRHGTSAATAVARNAVAADLIDPEFSQPVRSLSAVATGRPHLVSAESEAEQT FT RDDLMAIDDSASAPTDTQEPTTEVSGDDFAQHSQDEHKQGGKRRRKAVTPHWEDVLLGV FT RTNTKRPRK" FT misc_feature complement(763084..763149) FT /note="Predicted helix-turn-helix motif with score 1170 FT (+3.17 SD) at aa 130-151, sequence ATIAEIAEENGVTESRIEPYAH" FT CDS complement(763738..764868) FT /transl_table=11 FT /locus_tag="DIP0784" FT /product="Putative phosphoserine aminotransferase" FT /EC_number="2.6.1.52" FT /note="Similar to Mycobacterium leprae putative FT phosphoserine aminotransferase SerC or ML2136 or MLCB57.37c FT SW:SERC_MYCLE (O33062) (376 aa) fasta scores: E(): 6.8e-90, FT 62.63% id in 364 aa, and to Methanosarcina barkeri FT phosphoserine aminotransferase SerC SW:SERC_METBA (P52878) FT (370 aa) fasta scores: E(): 3.3e-10, 24.02% id in 383 aa" FT /protein_id="CAE49302.1" FT /translation="MSEYPILPSTLIPADPRFGCGPSKVRPAQLNAIVNAGADVIGTSH FT RQPAVKNIVGSIREGLSSLFSLPDGYEIVLSLGGATAFWDAATFGLIEKKSGHLTFGEF FT SGKFAKASAQAPWLDEPTIISAEPGDTPTPVAMEGCDVIAWAHNETSTGAMVPVIRPEN FT SDGQLVAIDATSGAGGLPVDMHNADVYYFSPQKCFASDGGLWLAAMSPAALERIEKINA FT SDRFIPAFLNLQTAVDNSRKNQTYNTPAVGTLLMLENQVEWMNANGGLDAMVERTTANS FT SALYEWAEKRAETTPYVTDPAKRSLVVGTIDFDDSIDAAALAKVLRANGILDVEPYRKL FT GRNQLRIGMFPAIDTADMDTLTAAIDYVLDNGFAQA" FT misc_feature complement(763759..764826) FT /note="BlastProDom hit to PD001544, PD001544" FT CDS 765541..766848 FT /transl_table=11 FT /gene="gltA" FT /locus_tag="DIP0785" FT /product="citrate synthase" FT /EC_number="2.3.3.1" FT /note="Similar to Corynebacterium glutamicum citrate FT synthase GltA SW:CISY_CORGL (P42457) (437 aa) fasta scores: FT E(): 2.5e-151, 87.52% id in 433 aa" FT /protein_id="CAE49303.1" FT /translation="MKGMLVATENKDKAVLHYPGGEYEMDIIHATEGNDGVVLDKLLSQ FT TGMVTFDPGYVSTGSTESKITYIDGDNGILRHRGYDIADLAENATFNEVSYLLIKGHLP FT TVDELHKFNNEIRHHTLLDEDFKSQFNIFPRDAHPMSVLASSVNILSTYYQDQLNPLDE FT EQLDKATVRLLAKVPMLAAYAYRASKGAPYMYPDNSLNARENFLRMMFGYPTEPYEVDP FT VVAKALDKLLILHADHEQNCSTSTVRMIGSAQANMFVAVAGGINALSGPLHGGANQAVL FT EMLEEIKANGGDATDFMNRVKNKEKGVRLMGFGHRVYKNYDPRAAIVKETAHEILEHLG FT GDELLDLAMKLEEIALSDDYFVSRKLYPNVDFYTGLIYRAMGFPTDFFTVLFAIGRLPG FT WIAQYREQLATTTKINRPRQIYTGETLRKVTPREQR" FT misc_feature 765700..766791 FT /note="HMMPfam hit to PF00285, Citrate synthase" FT misc_feature 766057..766098 FT /note="FPrintScan hit to PR00143, Citrate synthase FT signature" FT misc_feature 766219..766266 FT /note="FPrintScan hit to PR00143, Citrate synthase FT signature" FT misc_feature 766285..766371 FT /note="FPrintScan hit to PR00143, Citrate synthase FT signature" FT misc_feature 766453..766515 FT /note="FPrintScan hit to PR00143, Citrate synthase FT signature" FT misc_feature 766474..766512 FT /note="ScanRegExp hit to PS00480, Citrate synthase FT signature." FT misc_feature 766639..766689 FT /note="FPrintScan hit to PR00143, Citrate synthase FT signature" FT misc_feature 766699..766743 FT /note="FPrintScan hit to PR00143, Citrate synthase FT signature" FT CDS 767015..767374 FT /transl_table=11 FT /locus_tag="DIP0786" FT /product="Putative FK506-binding protein" FT /EC_number="5.2.1.8" FT /note="Similar to Corynebacterium glutamicum probable FT FK506-binding protein SW:FKBP_CORGL (P42458) (118 aa) fasta FT scores: E(): 8.4e-38, 82.05% id in 117 aa, and to FT Escherichia coli FkbP-type peptidyl-prolyl cis-trans FT isomerase FkpA precursor or B3347 SW:FKBA_ECOLI (P45523) FT (270 aa) fasta scores: E(): 2.3e-09, 42.71% id in 103 aa" FT /protein_id="CAE49304.1" FT /translation="MEKPQIQVPEGPAPEDIVIVDLIEGDGAEAQPGGLVEVHYVGVDF FT ENGQEFDSSWDRGQSIEFPLSGLIAGWQEGIPGMKVGGRRQLTIPPEAAYGPAGGGHPL FT SGRTLVFVIDLLNVG" FT misc_feature 767087..767362 FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomerase" FT misc_feature 767111..767371 FT /note="ProfileScan hit to PS50059, FKBP-type FT peptidyl-prolyl cis-trans isomerase domain profile." FT misc_feature 767126..767176 FT /note="ScanRegExp hit to PS00453, FKBP-type peptidyl-prolyl FT cis-trans isomerase signature 1." FT misc_feature 767216..767302 FT /note="ScanRegExp hit to PS00454, FKBP-type peptidyl-prolyl FT cis-trans isomerase signature 2." FT CDS complement(767461..768966) FT /transl_table=11 FT /gene="accDA" FT /locus_tag="DIP0787" FT /product="Putative carboxyltransferase subunit of FT acetyl-CoA carboxylase" FT /note="Similar to Corynebacterium glutamicum putative FT carboxyltransferase subunit of acetyl-CoA carboxylase AccDA FT TR:CAC42827 (EMBL:Y17592) (491 aa) fasta scores: E(): FT 8.9e-58, 55.31% id in 499 aa, and to Escherichia coli FT acetyl-coenzyme A carboxylase carboxyl transferase subunit FT beta AccD or DedB or Usg or B2316 or Z3578 or ECS3200 FT SW:ACCD_ECOLI (P08193) (304 aa) fasta scores: E(): 8.6e-22, FT 34.89% id in 235 aa" FT /protein_id="CAE49305.1" FT /translation="MTRTTAHELIAQVLDTDSFHSWDTAPVYGDISESYQQFLAKAREK FT SGVDESVITGEGTVYGHRVAVVLSEFNFLGGSIGAATARRIIAAIHKATEQRLPLLISP FT SSGGTRMQEGTPAFALMVSITTAVYRHKDAHLPYLVYLRNPTTGGVMASWGSAGHFTFA FT EPDALLGFLGPRVVELTTGRPLTQGVQSGENLAEKGVIDGVISPRELRASLKKIVEVIL FT SPADVTATPHSDPCQIDSDRHSVWESIETTRHIDRPGARSIMHAIGRDNYVQLFGSGDG FT RRSPAVIVAVARLAGRSAVIIAQDRHAQPPHATTELGTEALRCARRGILLAHELQLPLI FT SIIDTPGAELSDYAEEHGLAGSIARTLSELVSVDVPTLSLILGQGCGGGALAMLPADKV FT LATSHAWLSPLPPEGASAIIYRDTSHAAQMMEEQQVSAVTLKEVGIIDAIIDEPVAAHQ FT HPDAFATCVLEKVTAALAELDDSPAVGRESRLQRYEKLAHTLI" FT misc_feature complement(767680..768006) FT /note="HMMPfam hit to PF01039, Carboxyl transferase domain" FT misc_feature complement(767794..767823) FT /note="FPrintScan hit to PR01069, Acetyl-CoA carboxylase FT carboxyl transferase alpha subunit signature" FT misc_feature complement(767866..767907) FT /note="FPrintScan hit to PR01069, Acetyl-CoA carboxylase FT carboxyl transferase alpha subunit signature" FT misc_feature complement(767914..767955) FT /note="FPrintScan hit to PR01069, Acetyl-CoA carboxylase FT carboxyl transferase alpha subunit signature" FT misc_feature complement(768361..768390) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature complement(768418..768858) FT /note="HMMPfam hit to PF01039, Carboxyl transferase domain" FT misc_feature complement(768421..768456) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature complement(768490..768543) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature complement(768598..768654) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT misc_feature complement(768712..768756) FT /note="FPrintScan hit to PR01070, Acetyl-CoA carboxylase FT carboxyl transferase beta subunit signature" FT CDS 769059..769931 FT /transl_table=11 FT /locus_tag="DIP0788" FT /product="Putative oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative FT oxidoreductase SC4B5.01c TR:Q9ZBW7 (EMBL:AL034443) (277 aa) FT fasta scores: E(): 1.3e-48, 48% id in 275 aa, and to FT Corynebacterium sp 2,5-diketo-D-gluconic acid reductase FT SW:2DKG_CORSP (P15339) (277 aa) fasta scores: E(): 1.1e-39, FT 44.52% id in 274 aa" FT /protein_id="CAE49306.1" FT /translation="MVTMKQHENIIPTITLNDGTEMPAIGFGTYKLREQDAYRAVRSAI FT EVGYRHIDTASLYKNEEEVGRAVADAITAGEVARDELFITTKVWNDMHGDQLTQRSFQE FT SLHRLGLDYIDCCMVHWPWPQKGLYVESFAALAKIQGLGQLQSVAVANFYPEVLREIVA FT ETGIAPVLNQVELHPGFSQAEQRAVDRELGVVTEAWSPLGRGDSLNAEAITLIAQCYEK FT TPAQVTLRWIHQLGCSVVPKSANPQRQRENLDIFDFELNTEDMNSITSLDEQGGRLFVD FT PHDFPGEVE" FT misc_feature 769104..769883 FT /note="HMMPfam hit to PF00248, Aldo/keto reductase family" FT misc_feature 769188..769262 FT /note="FPrintScan hit to PR00069, Aldo-keto reductase FT signature" FT misc_feature 769200..769253 FT /note="ScanRegExp hit to PS00798, Aldo/keto reductase FT family signature 1." FT misc_feature 769368..769424 FT /note="FPrintScan hit to PR00069, Aldo-keto reductase FT signature" FT misc_feature 769464..769517 FT /note="FPrintScan hit to PR00069, Aldo-keto reductase FT signature" FT misc_feature 769566..769655 FT /note="FPrintScan hit to PR00069, Aldo-keto reductase FT signature" FT misc_feature 769677..769751 FT /note="FPrintScan hit to PR00069, Aldo-keto reductase FT signature" FT misc_feature 769776..769823 FT /note="ScanRegExp hit to PS00063, Aldo/keto reductase FT family putative active site signature." FT CDS 769931..770707 FT /transl_table=11 FT /locus_tag="DIP0789" FT /product="Putative hydratase" FT /note="Similar to Mycobacterium leprae probable enoyl-CoA FT hydratase EchA6 or ML2118 or U650AF SW:ECH6_MYCLE (Q50130) FT (247 aa) fasta scores: E(): 3.6e-24, 38.86% id in 247 aa, FT and to Escherichia coli probable enoyl-CoA hydratase PaaF FT or B1393 SW:PAAF_ECOLI (P76082) (255 aa) fasta scores: E(): FT 3.3e-13, 34.25% id in 254 aa" FT /protein_id="CAE49307.1" FT /translation="MAQVEVRIDGHLMCVTVNRHEARNALSAQMCDDITSALNNADEQA FT RDTAAIRAVLIRSVGTTFCAGADLGSTTQSDDAAEVTQSDFHDSLTRMLESVVSCGVPV FT IADIQGPAVGAGMQLALSCDLRLVHHAAWFKVPAASLGFALDGWTINRAQCLLGGGWAR FT SIFLGGATLSAPQAVATGFALEIADSDSAIAYAHRIAGMAPLALRQLKSALNSADFEYA FT LVGESRDLFAQCWASTDAREGQLARKQKRDPVFTGR" FT misc_feature 769967..770494 FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family" FT misc_feature 770243..770305 FT /note="ScanRegExp hit to PS00166, Enoyl-CoA FT hydratase/isomerase signature." FT CDS 771056..771397 FT /transl_table=11 FT /locus_tag="DIP0790" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCI8.08c TR:Q9RJ45 (EMBL:AL132644) (124 FT aa) fasta scores: E(): 2.6e-18, 43.63% id in 110 aa" FT /protein_id="CAE49308.1" FT /translation="MNAPVTPMQRREPSSEEFRAMQASPQFVDLKRAYRSFTFPMSIVF FT FVWYLVFVITATYVPDLMGKAVVGSVNVGVVLGVAQFVTTFIITWVYIKFANKNIEPRA FT AAIRESMEG" FT misc_feature order(771164..771232,771275..771334) FT /note="2 probable transmembrane helices predicted for FT DIP0790 by TMHMM2.0" FT CDS 771401..773053 FT /transl_table=11 FT /locus_tag="DIP0791" FT /product="Putative transport membrane protein" FT /note="Similar to Streptomyces coelicolor putative FT transmembrane transport protein SCI8.07c TR:Q9RJ46 FT (EMBL:AL132644) (544 aa) fasta scores: E(): 4.2e-82, 58.31% FT id in 547 aa" FT /protein_id="CAE49309.1" FT /translation="MNIYTLAADAPGSAAGNPVLNIIVFIAFIMITMAVVLRAGKSTNE FT ASDFYTGGGSFSGKQNGLAIAGDYLSAASFLGIVGAIALSGYDGFLYSIGFFVAWLVAL FT LLVAEPLRNVGRFTMADVLSFRLKQKPVRVAAAFGTLFVSLFYLIAQMAGAGSLVSVLL FT DLHDHSAQAIVVAVVGVIMIVYVLIGGMKGTTYVQMIKAVLLVGGVTSMTILVFFAVKG FT GFSQLFDAAVHTHSQSDYLAKKGYEASQILEPGLKYGKSETSKLDFLSLGIALVLGTAG FT LPHVLMRFYTVPTAKEARRSVVWAIILIGSFYLMTLVLGFGAAALVGPDRIMKAPGTAN FT AAAPLLALELAGPVFMALISAVAFATVLAVVAGLAITASASIAHDLYDAVLRDGKSTEE FT EQVRVSRITVVAIGVAAIILGILAMEQNVAFLVSLAFAIAASANLPTILYSLYWKRFNT FT TGAVASIYTGLISALVLIIFSPAVSGSETSMISGADFAWFPLSSPGLVSIPLAFIAGIV FT GTYLGRPDNLDHLQAEMEVRSLTGVGVEAPVDH" FT misc_feature order(771443..771511,771584..771652,771665..771733, FT 771794..771862,771905..771973,772007..772060, FT 772202..772270,772304..772372,772460..772528, FT 772604..772672,772700..772759,772778..772846, FT 772889..772957) FT /note="13 probable transmembrane helices predicted for FT DIP0791 by TMHMM2.0" FT misc_feature 771452..772846 FT /note="ProfileScan hit to PS50283, Sodium:solute symporter FT family profile." FT misc_feature 771545..772804 FT /note="HMMPfam hit to PF00474, Sodium:solute symporter FT family" FT misc_feature 772565..772588 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 773178..774032 FT /transl_table=11 FT /locus_tag="DIP0792" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49310.1" FT /translation="MNYGSDRGQQSFDYSAPYLPRWKALPLVVSALGVIALPFVAGGDS FT QDFSSSQSTSPVVHHRPIDQIALSTFEDTTPLKTDEVEQAWEHTQITYVDLRTGAHLGS FT GAERLARASLSLSKLYIADYVFDHGTQKEKEQAVEMIRKSDDDIADKLFDAYPNCIDSV FT AKKYQLEATQTYGRWGYSYTSTYDVVHFIVSLLRTDPDSPVLEAMRNVAPKAADGTDQD FT FGTAILPGVQGSKFGWSTDGELHSSVSFGEDFVVAVSSMGSADDLTQLVKTQLSGHVRT FT SAS" FT CDS complement(774025..774933) FT /transl_table=11 FT /locus_tag="DIP0793" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2601 TR:AAK46909 FT (EMBL:AE007096) (240 aa) fasta scores: E(): 4.3e-31, 46.31% FT id in 244 aa. Note: Contains a putative twin-arginine FT translocation (TAT) system recognition motif (RRSFLT) at FT the N-terminal region" FT /protein_id="CAE49311.1" FT /translation="MNYSISRRSFLTGAVAAIGGTALAVATAGTAHAAPGPIRGTVIDF FT AAGVPSAQGIKNAGHLGSVRYVSRRRPGTESWMTGKPVTATETHAAGAAGLLTASVYQF FT GKDATADWKQGAAGAAVHVPQAIALHVAAGGPTRRPIYMAIDDNPTRQQYDTQIRPYLQ FT ASAAALNAAGYQLGIYGNYNVIDWAIADGLGEFFWQHDWGSQGRIHPRTTIHQKAGYQR FT VIDGVTVDVNNVYASDWGQWLPGVTQPAAPTHVPAPVPGPAPVPLSDPSVVQNLQQNLP FT PLPAGMPPVDQIIRDISKLSS" FT misc_feature complement(774067..774204) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature complement(774835..774933) FT /note="Signal peptide with cleavage site probability 0.849 FT between residues 32 and 33" FT misc_feature complement(774898..774915) FT /note="Potential twin-arginine recognition motif RRSFLT" FT CDS complement(775062..776261) FT /transl_table=11 FT /locus_tag="DIP0794" FT /product="Na(+)/H(+) antiporter homolog" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane efflux protein SCE39.29 TR:Q9X8F2 (EMBL:AL049573) FT (404 aa) fasta scores: E(): 7.7e-37, 35.500% id in 400 aa, FT and to Enterococcus hirae Na(+)/H(+) antiporter NapA FT SW:NAPA_ENTHR (P26235) (383 aa) fasta scores: E(): 7.5e-12, FT 21.964% id in 387 aa" FT /protein_id="CAE49312.1" FT /translation="MLLDADPLVSFAWIMGAALLAPLLSYATGKRLPAVVLLICFGLVI FT GPNVLGLASLDGGVGLIKEIGLGMLFLLAGYEIEPETLRGKEGRTGLATWLMCAVLSFL FT GAMSIVGFHSSSTAIVLAIALTSTAIGTLLPIMKQHDMLDTPVGRSLLIHGAIGEIAPI FT LAMALLLSSRSTWLTTAVLLAFFLVAAVVAIVPRTVKFFLPWMGRAMVDGAGSTNQTVL FT RLVLLMLAILMSVAAVFELDVVLGAFAAGFILRQMVPEKYRTPLEQRLDIVGYSLFIPV FT FFVCSGMAINPQAVAEKPWLLVALVPLFYVTRGLPIFLREVFFSTGSEVSGWKESLQLS FT LYAATALPIIVAVTEVATHSKLLSADNASILVAAGSVTVLLFPLIGNLITQGRRNAARG FT " FT misc_feature complement(775071..776240) FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family" FT misc_feature complement(order(775092..775157,775188..775244, FT 775305..775361,775392..775445,775506..775571, FT 775665..775730,775752..775808,775854..775904, FT 775926..775991,776103..776159,776181..776231)) FT /note="11 probable transmembrane helices predicted for FT DIP0794 by TMHMM2.0" FT misc_feature complement(776181..776261) FT /note="Signal peptide predicted for DIP0794 by SignalP 2.0 FT HMM (Signal peptide probability 0.627) with cleavage site FT probability 0.446 between residues 27 and 28" FT CDS complement(776521..776973) FT /transl_table=11 FT /locus_tag="DIP0795" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49313.1" FT /translation="MSGNSGASPQDMVKKLVYLSCTLNQKCGQRTGPHREPEPFLGFSV FT RDRSGLEGAIASVFQSSFDVLLYPTIYDQAAALLFKLANGHYFQDGNKRTAFHLCLAYL FT RANNVHVSPPRSDDVITLLQTTVSRSGSQENGIAFVRQKLLDWTVD" FT misc_feature 776521..795539 FT /note="Anomalous G+C content (59.68%) and dinucleotide FT signature. Putative phage related pathogenicity island. Not FT present in C.glutamicum" FT CDS complement(776985..777551) FT /transl_table=11 FT /locus_tag="DIP0796" FT /product="Putative phage protein" FT /note="Similar to bacteriophage bIL311 ORF21 TR:Q9AZG0 FT (EMBL:AF323672) (306 aa) fasta scores: E(): 0.048, 28.030% FT id in 132 aa" FT /protein_id="CAE49314.1" FT /translation="MISILHVAARVLELRPSCDKMKLYKLCYFSQGWHLAWTGRPLFNE FT ELQAWKYGAVSPTLRQASGLRADDDRLVTQIWSGDSSQLIDYERSVVDTVVSFYGDLES FT FHLSDLSHGFAWSTVRGNLPPDASCSDVIPHSLIRREFVENAWGEAPTPNAPERLPSMA FT LDALEQAADDVAAENAETLRLLAFI" FT CDS complement(777583..777750) FT /transl_table=11 FT /locus_tag="DIP0797" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49315.1" FT /translation="MGPLRDWYTVVDALARVLLQVGEVPADWEILYPGVSQRGGGNPLT FT SFRSTRLKVE" FT CDS complement(777872..778144) FT /transl_table=11 FT /locus_tag="DIP0798" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49316.1" FT /translation="MDFLLAQRKDLSRVDDELEFFLNNRSAVVVVDASVLPFLRHSWEE FT LGAVDEFHTLVRALESARRLRLIRDHPVPALRKGTASFSALAPSR" FT CDS 778157..778477 FT /transl_table=11 FT /locus_tag="DIP0799" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49317.1" FT /translation="MTYRSSARNDYASLKVPGVPVPIKARTLTLRKVLKKDLPVDYLAL FT PGERKSGRISIAVGATRLSRVTRCSRTVSLVSVSMRDSLMLSCAPCRIHVPRSDRLCSA FT RL" FT CDS 778799..779374 FT /transl_table=11 FT /locus_tag="DIP0800" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49318.1" FT /translation="MGLTSHTGPGPAPAHRPVGGLVPAEPACGWPGWYIAVWGTGHGAR FT GGARSSQRAGNGFLTKGHTPCGRATRPRAGRSISLREKIQRQGVTQASSGSALSILSCG FT GMGESPARGRERPNSIPRNERPRGATHPRAGTRTRAGTEAGTGLLHQVEQVRCAGVKYP FT HGPVHLTKSCREHGSQTASQPPSASGGG" FT CDS 779748..780104 FT /transl_table=11 FT /locus_tag="DIP0801" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49319.1" FT /translation="MACKRLVPGGEIERTRRVLDLFADSGSRVIRPQQPVDVLGSEGPA FT KVLGQVQNNVAVQYDHMVRGIGHDTGLESDQVCRLTERGICVRELLTLVFGDKALGAEH FT GDIRRGHTQDAGVL" FT CDS complement(780077..780574) FT /transl_table=11 FT /locus_tag="DIP0802" FT /product="Putative phage protein" FT /note="Similar to bacteriophage bIL311 ORF21 TR:Q9AZG0 FT (EMBL:AF323672) (306 aa) fasta scores: E(): 0.0075, 25.203% FT id in 123 aa" FT /protein_id="CAE49320.1" FT /translation="MYMRAGDGRVHGIYSSTDVANLILKTTGTALMDKKKLHKLLYYMQ FT GWTLAALGRPAFANDLQAWVDGPVSVGMRRDTHYATCFEVANRPLSNPLAPQDRDLLAL FT MYLIAPFYAQQQTQALVDSTHAEAPWLDARGGLPPPMPIPARRSLTTHCTATFHSTPAS FT WV" FT CDS complement(780837..781160) FT /transl_table=11 FT /locus_tag="DIP0803" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49321.1" FT /translation="MQVERQKSKSHYPGESAWHTYQRAVKKAQSAATELERQTILRSAR FT HRYWTAIGKIHKVAVDTTREPVNPAKVHPITGQRRQFSNSRFDGTPGRKRNIKNVARVR FT RIG" FT CDS complement(781172..783724) FT /transl_table=11 FT /locus_tag="DIP0804" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49322.1" FT /translation="MAVPGFTFDEALLTEIAASFQLRASNINALTALVQRLSGDFDRST FT PQVMNMATGAGKTYVMAAFIEYMRRQGLRNVMIVTPGLVVQTKTVANFTQGSPKFIDGS FT PVPPRVVTPENYKSNPADQTAFTEQGASNVYVFNVQQLIGPKDMDGDTTSGSKAAVARG FT VHKFSEYAGVLYDELKNMDDLVVLADEHHLYSAKAKAFHAAIHDLEPAALVGLTASPGE FT KDETIFTYPLYKAIADKNVKQPVIVYRKDGYGELGEYQQLKDAKTLLETKAGHYAVKNQ FT EEGTSPISPVMLVVCEDIAHATRIEETLVGPDLFGDPYAVLRVDSDSMNEEKAALLDAI FT DTPDSPVRAVVSVNKLKEGWDCRSIAVMVTLRAMDSDILTQQTLGRGLRLPYGKYAEVE FT AIDTLDIVAHESFQRLLSSEKVNKSFGFDKRKTSQPAPPQPVHPMDVTPPTPVPTPDLD FT PVPGGNTTAPTPVLPPADPQPVAPDLDKGTDTRPPLGLKELGGDGASPEDLYPEPTPLA FT VVELVEKFRDVSFLFPRTTYTAKNAAYPLEKLMQDEIIQVARQITDNPQAVLERLALAG FT DEAQGRVMAKRLTQGTIDAIALDEDAVKKQLVGAIITHRRVERSPENISQAKNRIAPLI FT YNNALATTWTVDTLHVASILLGKAIDASVRQFLANLEPDVTLVPLTMPTRTRFELGVGK FT TIEPRPGEFDKYINGQFYSGWTRNLYTAASFDSNSAEHKLACDLDVSPDVEWWTRLYMA FT DGASIDYQVGKTYYPDFVVRDREGRTWIVEGKDAGGRTNEEVKAKRDAAELALNLMASN FT EDMGALKVGYIIAYEDTIKEAGSWSRLISMSGAVKSAN" FT misc_feature complement(782180..782422) FT /note="ProfileScan hit to PS50099, Proline-rich region." FT CDS complement(783728..785731) FT /transl_table=11 FT /locus_tag="DIP0805" FT /product="Putative DNA methylase" FT /note="Similar to Haemophilus influenzae putative type III FT restriction-modification system HinDVIp enzyme Mod HI1056 FT SW:T3MH_HAEIN (P71366) (629 aa) fasta scores: E(): 8.3e-26, FT 29.960% id in 504 aa, and to Lactococcus lactis FT modification methylase LlaFI Mod TR:Q9Z6H7 (EMBL:AF054600) FT (680 aa) fasta scores: E(): 5.8e-13, 29.369% id in 412 aa" FT /protein_id="CAE49323.1" FT /translation="MTQQKLELTWFNKDQALIPQERGRYGYAWVDPHDPRYCQTHYLIE FT GETITGEQAPKQDGTQYGERADLEPTTDNLLINGESGDVLEALTRVPELADKYVGKVKC FT IYIDPPFNTAQTFANYEDNLEHSVWLTMMRDRLLHMKKLLSEDGSIWVHLDDVENHRMR FT LLMDEVFGAGNFVAEVVWEKTYSPRNDSKGIPAVTDTILVYRKSDQFSPNRLPRTAEMN FT ARYKNPDHDRNGPWKSGDTTAPGNMSGKVQHPSVFAIQHPVTGQFIYPTYGRMWCFGQE FT RILSSLSRYAPYRLAEPDMKSRSKRTGIPEEQLRADVFDLVVDETARQGDKTQAFRNIS FT LGNWPEFFITDKGFGRKVPMSKSDGRVAPNLLRWEEVGHTDGAKKEITALFPNQAAFST FT PKPERLLERVIHIATNPGDIVLDCFAGSGTTAAVAHKMGRRWVTCELLEDTFNRFTVPR FT LTKVVSGEDMGGITTTKGERVDATADGLPEGMSPEDAQKFTSLLNKVIKNNPELKNSAQ FT VKELKAATKTRNSGDVVNWRGGGSFTIATLSKPCFDVDEELGLTILTEHADADNLARSV FT AAHLRFTLTPEHPVFPGRRGNMWLYVTRQPVDERVMDELLSYLSEGEAVTVASTSVLPD FT HTTYLHKRAKGSRALSIPDGMFTHTLSTKDEA" FT misc_feature complement(784355..785314) FT /note="HMMPfam hit to PF01555, DNA methylase" FT misc_feature complement(784430..784474) FT /note="FPrintScan hit to PR00506, D21 class N6 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(784430..784486) FT /note="FPrintScan hit to PR00508, S21 class N4 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(784475..784543) FT /note="FPrintScan hit to PR00506, D21 class N6 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(784490..784543) FT /note="FPrintScan hit to PR00508, S21 class N4 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(785264..785326) FT /note="FPrintScan hit to PR00508, S21 class N4 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(785267..785326) FT /note="FPrintScan hit to PR00506, D21 class N6 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(785387..785431) FT /note="FPrintScan hit to PR00508, S21 class N4 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(785390..785428) FT /note="FPrintScan hit to PR00506, D21 class N6 FT adenine-specific DNA methyltransferase signature" FT misc_feature complement(785399..785419) FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT CDS 786230..786958 FT /transl_table=11 FT /locus_tag="DIP0806" FT /product="Putative phage protein" FT /note="Similar to Bacteriophage P1 hypothetical 19.9 kDa FT protein TR:Q9XJP4 (EMBL:AF137370) (166 aa) fasta scores: FT E(): 8.2e-09, 28.467% id in 137 aa" FT /protein_id="CAE49324.1" FT /translation="MDGFQLGNNSPKEITVFCDESRPEALRAASITQRYLCIGSIWVDR FT ERVREVNEEIRALQIKYSKMGEVKWGKVSPSSIQFNCELIDLFFDERFNLQFRAIVVDN FT QKVDLSYHNNDQELGFYKFYYQMLKHKLINGCSYRIYCDLKTNKMRGRASTLEHYLQTY FT CLGSVEMVQLLPSNDLPLMQLTDLLLGAVSTKFNFRIPKSPAKNEVISTIERHIGHQIQ FT PTRKNEQKFNVFCIEPGMGR" FT CDS 786955..787392 FT /transl_table=11 FT /locus_tag="DIP0807" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49325.1" FT /translation="MTDKYTFLILQNEQEYKNYFVHNYCQGPLVTVHGLSVRFSASTFD FT HAFYESSDRNGAKDIFSRSRAERIGWIAHALQDPKADWFCGWDNKKRRYDSSRGVCVVR FT GDFVTVIKVLNNQKAKFVTCYRADNSISKIRRSPIWTPPEK" FT CDS complement(787574..787945) FT /transl_table=11 FT /locus_tag="DIP0808" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49326.1" FT /translation="MTMTRHPYLMEVSATATLRGVRVRWVSSGRVSRRSRAVYRLRTHV FT YQIVVGMRGGHLASVELVDDRSGFRRELEWPVSWYAGVLTLLMPPSWQGVLQTCGYLAE FT MEIDGVNMGRLTGPEVIVG" FT CDS complement(787932..788174) FT /transl_table=11 FT /locus_tag="DIP0809" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49327.1" FT /translation="MAAVAGDTVPFVPARRDVTCADEVTAVGSFFRYTGHVIDGQGHVR FT LEEVVDPVDTDEDVDCCDGWCDETQCFLFEEDDDD" FT CDS complement(788227..788601) FT /transl_table=11 FT /locus_tag="DIP0810" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49328.1" FT /translation="MNSPDRFRLTSCDVTPDRTGMFTAIWTCYGRLAPGWRVVFGIESG FT TDRLEIEAVADAGVCAPLPDGVADAWLICNGLLIAVLTPELGARLTGGSGYLRFSSSPP FT HDAVSSTPAHVHRAGIPPRG" FT CDS complement(788588..788956) FT /transl_table=11 FT /locus_tag="DIP0811" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49329.1" FT /translation="MFTNHPTLTGFAAYNNSLRDVGVRFELDRHPRTEHLVCLAASTPG FT LCLVLWARGAHLLSAWTHTDYGIAYTPVVTRFQYDLVNMAFDVIVPGQVSFTCNPVWSA FT WMWVDGRSCGQVIVNELA" FT CDS complement(788946..789917) FT /transl_table=11 FT /locus_tag="DIP0812" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49330.1" FT /translation="MTHYCDVQALRVENILACHASWAGPIYSSATQLVPTYEPGIGDML FT LTGVSQTNPLLTSRYQARISQEGVLTLADTLSSVRITETDYTAITSHAAVAWLTGGGTA FT TTLDAGLDPAAYTPAPGAPTSRGDVRADSIRLAGHTWPFEGSVGIASMPWAGEFSPYAE FT VWQVHAELPPLFDAPECVIDAEVVVTHNYDDRLFAQTGCRAVAAGVVTDLAHWEYGRVR FT IGGDTFMVDEEFSLRSSLHRPRVYSTRTNPQVPPALASHLLGCAVWSVMAEASQDTTRL FT VPVRSVPQFAAELTSTDQMFPFTGRMNRSQVEVQWKGLDHVH" FT CDS 789916..790419 FT /transl_table=11 FT /locus_tag="DIP0813" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49331.1" FT /translation="MVCLLERGGCELGFTLGSGAFDSKLHRPQSVWVQCTRKIVGRAGQ FT RDCVLWRLAPSEGAWKTKTAGTCNNEGIFTSPRTETHPFSRRNRTPGQRPLAHTLTGHF FT CRPAPSPARQIRCTLVHPSALPTSGCSRSHRNGFTRNVFPRSRGRVATRTLSSYTWSRH FT QFPV" FT CDS 790442..790960 FT /transl_table=11 FT /locus_tag="DIP0816" FT /product="Putative exported protein" FT /note="No significant database matches" FT /protein_id="CAE49332.1" FT /translation="MGSVPSLRPAHQHDAAMVLALTLGAGFRASEVAHATGPFDPAQGL FT VTASGFRDLAPRQVPIAQVVLGQMSAFLEPVPAGRTLIRPARVATTTRLVGRFVARAWP FT EPPNLRRLRSSWIVGALSTGIDPSCLSDLAGTCDLTPYAAWARIPATQVADPRLIVPGT FT PGVWEVRYA" FT misc_feature 790442..790546 FT /note="Signal peptide predicted for DIP0816 by SignalP 2.0 FT HMM (Signal peptide probability 0.881) with cleavage site FT probability 0.849 between residues 35 and 36" FT CDS 790953..792017 FT /transl_table=11 FT /locus_tag="DIP0817" FT /product="Putative phage integrase" FT /note="Similar to Mycobacterium tuberculosis probable FT integrase/recombinase XerC or Rv2894c or MT2962 or FT MTCY274.25c SW:XERC_MYCTU (Q10815) (298 aa) fasta scores: FT E(): 3.7, 24.904% id in 261 aa" FT /protein_id="CAE49333.1" FT /translation="MPRGYKNPRVVPDNVERVISAYTPVPGTLAWGVVWEDPFAEFVRE FT CARDLGLPATASDDVIRGNLRLIASFVAWVIHEYDCPLRRDEIFDYILAEAYAMSVIYV FT RDGHGKGTSNKVRGIRRSMLTKIGWKMNKHFGEPHKHTLPQEGALEPYKQWQLNKVDAW FT AGSQPNERRRRNARVAIALALGAGLRTSEIAGLTADDCEVTDSGMVLIHAPGYRGGEPR FT ITVVDHRFEDTITDRLAELADLRAAGEPGQYLYCPHLLGRTTDMVNDYMKKKITSSGAD FT CYLQPDLRRLRNTWITGHIKAGVEEGAICQAAGLKSLNQFRDLVDEAAKARAEQSYARL FT RGGEHRPVLRLVQG" FT misc_feature 791406..791948 FT /note="HMMPfam hit to PF00589, Phage integrase family" FT CDS complement(792350..792688) FT /transl_table=11 FT /locus_tag="DIP0818" FT /product="Hypothetical protein (putative DNA-binding FT protein)" FT /note="No significant database matches" FT /protein_id="CAE49334.1" FT /translation="MIDMTSKKRAVAPRDLYRRWPWANTAGMEPDMVRLQIFVQNLERA FT VIGDGRMRPVTSPSEFCDNIGISHATLGRILRGEVIPRFDTIDKLERGVGRALFPPFED FT VRVRGNKG" FT misc_feature complement(792458..792523) FT /note="Predicted helix-turn-helix motif with score 1325 FT (+3.70 SD) at aa 56-77, sequence TSPSEFCDNIGISHATLGRILR" FT CDS 792701..793471 FT /transl_table=11 FT /locus_tag="DIP0819" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49335.1" FT /translation="MLARQIKNAAHKVTDDELAIELTAIISVKYYAARSHIDNFNGKLA FT GRVATYLAWVNGTYTCADLGELKAAASDEAVIAHYLSQVCEERPIIRTRLYHHLVKLLF FT PEPPTTRHKPYTIQEQHDLIRWARGLKTNYQISTALAAICLLTGAGLSSRDVLQVAVAN FT LEQTNRWGLFVNVPAYDGFSCRRVHVEDLQAEYLLNHFYDRSACQYMVLPRMMNRNKAS FT AVPDIFTEFRSIVTDVKRPYMKRMKATWDARPRR" FT CDS 793522..795300 FT /transl_table=11 FT /locus_tag="DIP0820" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49336.1" FT /translation="MPGYPLTPPRTLPYRVDVTQVKTAARLVDTSGVVERIDTWRTEDG FT YRPERGGRRPYLNERQILILMVILLRLGEPLHLTKATNIIAVAMTDNARTELGLPTLVQ FT AHRVGDNYIHGYANWYKRVQRSWKRLLRVVDPYPEMTYARALTCAEYEELTKGRDPEFI FT QRRRDRATELWNRLITATHTELPEEAWSHWEGDVTGDGTPIDAARRGNPGSKRWAAHRR FT MSSEPDAGWYRPEGDHVGDGPGGTQRWAYEATLMFAGIVQSGEYGVPSLVVGMSLDKPG FT HKPAINYLNALRYFTTTELGQRRRYAVGDRAYPAGSKVENYHRPLRELGYGIVGDYRID FT QLGKQVDFAGALMIEGGWYCPSTPQNLIDATLRFRGAKGYDPIDEDEYRKLIEQRKAYR FT LRRKQGTPNGQAMMCPARGPGKTKNCTLLGIPAPIPGKDQPAPIRRSRPAGRVCSNKDS FT LMIPSIEGEKFRQDGPDYQTPEWGHIYGTLRNVCEGSNSNIKNLSASIGNRTRRLVRGF FT AAHWAMTALGVIASNLDKISSYLDRVEANTPIKSPDPDPTPPDGGRRTRPEPDVVPVEQ FT PDWNPKRRPGAPPLAA" FT tRNA complement(795540..795612) FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:795577..795579,aa:Arg) FT /note="tRNA Arg anticodon CCT, Cove score 70.29" FT CDS 795749..796081 FT /transl_table=11 FT /locus_tag="DIP0821" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49337.1" FT /translation="MLEETLSKLYLQVSCGGTLMALKQPIFHDVERRPIAATVVEENGT FT TVLALEQIAEDGSTTRVLTLNKFDSKQLSAACDRYLHQQNSIDFANVNTLLTDIDRHNL FT HVDDED" FT CDS 796088..796840 FT /transl_table=11 FT /locus_tag="DIP0822" FT /product="Putative cobalamin synthesis related protein" FT /note="Similar to Pseudomonas denitrificans CobF protein FT SW:COBF_PSEDE (P21636) (261 aa) fasta scores: E(): 6.9e-32, FT 39.68% id in 252 aa" FT /protein_id="CAE49338.1" FT /translation="MRTIYVIGIGTGSPEFLTLQAISGLRHAQAIVALDKGEQKSDLLA FT LRQKIVDTHAPGTPIYAVTDPERDRNPDNYEEEVRRWHAERAHLLASTIRERTPDDGAV FT AFLVWGDPSLYDSTLRIIEHMRNLEDLHADVKVIPGITAVQVLTAEHGILINRIGEAIH FT ITTGRNLPETSAKDRRNCVVMLDGKTAWQDVATEHTYMWWGAFLGTEQQVLRKGYVHEI FT GAQVAELKQQLRTEHGWIMDTYLLRELD" FT misc_feature 796094..796810 FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT CDS complement(796859..797116) FT /transl_table=11 FT /locus_tag="DIP0823" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3292 TR:AAK47635 FT (EMBL:AE007142) (84 aa) fasta scores: E(): 4.4e-12, 48.1% FT id in 79 aa" FT /protein_id="CAE49339.1" FT /translation="MSDNNHVTIYAADWCPFCQRLIKALNRTETPFTLIDVEADEAASE FT WVKSVNNGDRIVPTVKYSDGTTATNPPASDVRKKLEELAG" FT CDS complement(797137..797640) FT /transl_table=11 FT /locus_tag="DIP0824" FT /product="Putative folate reductase" FT /note="Similar to Mycobacterium avium dihydrofolate FT reductase FolA TR:O30463 (EMBL:AF006616) (181 aa) fasta FT scores: E(): 2e-22, 46.1% id in 167 aa, and to Escherichia FT coli dihydrofolate reductase FolA or TmrA or B0048 FT SW:DYR_ECOLI (P00379) (159 aa) fasta scores: E(): 1.5e-13, FT 42.76% id in 152 aa" FT /protein_id="CAE49340.1" FT /translation="MLRAIWAQSTDGVIGDGNDMPWHVPEDLAYFKATTLGEPVIMGRT FT TWTTIPERFRPLPGRRNFVLSSRAPGAWSTGAEVVTAIPELDCDAWIMGGGAVYTSTLP FT LVDEVVITLIDVTLAPVLGDAAVYAPALDDSFEVVEESPWQQSASGTVLGTPARYKFQR FT LRRR" FT misc_feature complement(797143..797640) FT /note="HMMPfam hit to PF00186, Dihydrofolate reductase" FT misc_feature complement(797332..797376) FT /note="FPrintScan hit to PR00070, Dihydrofolate reductase FT signature" FT misc_feature complement(797488..797523) FT /note="FPrintScan hit to PR00070, Dihydrofolate reductase FT signature" FT misc_feature complement(797536..797562) FT /note="FPrintScan hit to PR00070, Dihydrofolate reductase FT signature" FT misc_feature complement(797536..797604) FT /note="ScanRegExp hit to PS00075, Dihydrofolate reductase FT signature." FT misc_feature complement(797572..797604) FT /note="FPrintScan hit to PR00070, Dihydrofolate reductase FT signature" FT CDS complement(797640..798452) FT /transl_table=11 FT /gene="thyA" FT /locus_tag="DIP0825" FT /product="thymidylate synthase" FT /EC_number="2.1.1.45" FT /note="Similar to Escherichia coli thymidylate synthase FT ThyA or B2827 or Z4144 or ECS3684 SW:TYSY_ECOLI (P00470) FT (264 aa) fasta scores: E(): 1.5e-75, 63.98% id in 261 aa" FT /protein_id="CAE49341.1" FT /translation="MSTNNTIKTPYEDLLRTILEQGSHKDDRTGTGTTSLFGQQMRFDL FT TEAFPLITTKKVYWKGVIGELLWFLQGSSNVRWLQKRNIHIWDEWASEEGELGPVYGVQ FT WRSWPTPDGQHVDQIAQALDILKNNPDSRRNIVSAWNVADLNNMALPPCHLLFQLYVAD FT GKLSCQLYQRSADMFLGVPFNIASYSALTHMLAQQAGLKVGEFIWTGGDCHIYDNHREQ FT VLTQLSREPRPYPQLTLRKASSIFDYDFDDFTIEGYDPHPAIRGEVAV" FT misc_feature complement(797643..798422) FT /note="BlastProDom hit to PD001180, PD001180" FT misc_feature complement(797643..798437) FT /note="HMMPfam hit to PF00303, Thymidylate synthase" FT misc_feature complement(797790..797843) FT /note="FPrintScan hit to PR00108, Thymidylate synthase FT family signature" FT misc_feature complement(797877..797957) FT /note="FPrintScan hit to PR00108, Thymidylate synthase FT family signature" FT misc_feature complement(797964..798011) FT /note="FPrintScan hit to PR00108, Thymidylate synthase FT family signature" FT misc_feature complement(798030..798089) FT /note="FPrintScan hit to PR00108, Thymidylate synthase FT family signature" FT misc_feature complement(798243..798308) FT /note="FPrintScan hit to PR00108, Thymidylate synthase FT family signature" FT CDS complement(798546..799304) FT /transl_table=11 FT /locus_tag="DIP0826" FT /product="Putative sulfite synthesis related protein" FT /note="Similar to Mycobacterium tuberculosis CysQ protein FT homolog or Rv2131c or MT2189 or MTCY270.37 SW:CYSQ_MYCTU FT (O06244) (267 aa) fasta scores: E(): 9.2e-23, 52.51% id in FT 259 aa" FT /protein_id="CAE49342.1" FT /translation="MTAQFDDATLTKRLAKGTGEILKGVRNVGLLRGRELGEAGDDLAQ FT NWIARVLEQHRPDDGFLSEEAADNPERLGKDRVWIIDPLDGTKEFATGRQDWAVHIALV FT ENGVPTHAAVNLPDLGVVFHSSEVRAVGGPYAKKIAISHNRPPAVATHIAESLGFTAEP FT MGSAGAKAMHVLLGDYDAYIHAGGQYEWDSAAPVGVSLAAGLHCSRLDGTPLNYNNKDT FT YLPDVLICRPELADDILTMAAAFREENGSY" FT misc_feature complement(798549..799289) FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family" FT misc_feature complement(798690..798746) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(798753..798800) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(799026..799085) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(799029..799070) FT /note="ScanRegExp hit to PS00629, Inositol monophosphatase FT family signature 1." FT misc_feature complement(799098..799148) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT CDS 799343..804157 FT /transl_table=11 FT /locus_tag="DIP0827" FT /product="Putative ATP-dependent helicase" FT /note="Similar to Escherichia coli probable ATP-dependent FT helicase Lhr or RhlF or B1653 SW:LHR_ECOLI (P30015) (1538 FT aa) fasta scores: E(): 1.4e-134, 46.42% id in 1579 aa" FT /protein_id="CAE49343.1" FT /translation="MCETCLIVIMDSSHDFSFADTFALQVATWFSDVFAQPTVVQRQAW FT AAISAGENALVVAPTGSGKTLAAFLWALNELVQGSGQTALLSRQAAGSAEVEASRAKGV FT KVVYISPLKALGVDVENNLRAPLTGINQVAARLGIDQSDITVGVRSGDTPASERSKQVR FT NPPDILITTPESLYLMLTSKARSILTTVDTVIVDEIHAMAGTKRGVHLALSLERLEHLA FT AQPVQRIGLSATVRPLDVVARFLGGDRPVEVINPPLEKKWQLAVHVPVDDMSDLPTPEP FT VSEIGEATIDDPLGLTTQPEGFAESALPAQGSMWTFIEQDVFDEVMEHRSTLVFVNSRR FT TAERLTSRLNELYAQRFQPEALSPALRRPPAQLMKSIDIAGEATAIIARAHHGSVSKDE FT RALTEKMLKQGELRAVVSTSSLELGIDMGAVDKVIQVESPPSVASGLQRVGRAGHVVGA FT VSHGSFYPKHRADLVQTAVTVGRMTEGLIEELHVPTNALDVLVQHTVAAVAMDDLDVED FT WYATVVRAYPYRDLPREAFDAAIDLTAGVYPSTDFAELRPKVIYDRITGTLSARPGAQR FT TAVINGGTIPDRGMFGVFLVGSGESGAPRRVGELDEEMVYESRVGDVFTLGASSWRIEE FT INKDQVLVTPAPGHTGRLPFWTGDQAGRPAELGKALGAFRRTLVADPSVVEGMGLDVRA FT RSNVVAFIQQQQESTGVVPDEVTLVLERFRDELGDWRVVLHSPYGRGVNAAWALVAGAA FT FSQRTGMDAQPVASDDGIVLRVPESDAEPGADLFEIDPDTVEELVAQQVGNSALFAARF FT RECAARALLLPSRTPGKRAPLWQQRQRAAQLLDVARKYPSFPIVLETVRECLHDVYDLD FT ALVELAAALKLRKVRIAEVTTQQPSPFATSILFSYTGAFMYEGDSPLAEKRAAALALDP FT ALLAKLLGTVELRDLLDPTIIAEVDQDVRRRSQRRRAHTAEQLVDALRVLGPVPLTEIP FT AIAEVDVPAVLQELGRRVMEVRIAGVAHLALADDAALLRDALGVPVPPGIPAQVDTITD FT AVAQLVTRWARARGPFVLSDVQSAFGLAAGVAHGVVDTLHKSGVVTMGRFRAGVDQSEY FT MAPEVLKIIRQRSLAAARAETQPVSQSALGRFLPQWQQVAAMGQQPQLRGADGVFAVVE FT QLAGVRLPASAWETMVLPQRVSGYQPSDLDELTANGEVAVIGAGSAGSSDPWVMLVPTD FT YAAQLIDAPDVETLSPIQQQIVEILSNGGGYLISSIRDQILGSDTDVRTAIWELFELGM FT ISPDGMAPIRARLSAGSGASSAHRAKRTPARGRLRMGRTRFAQSHQSGIAADMVGRWSL FT TIPADTDATARSVAHGEAWLDRYGVVTRGSVVAENTLGGFALAYKVLSRFEEAGKAMRG FT YLIDGLGAAQFSTPAVIDRLRGLGDSDDVTGWPSGTTDPEVYVLAAADPANPYGAALPW FT PESGPTRAAGSIVVLIDGLLIAHLTRGGRTLTVFDLPTGIEVADVMPMVVSALSEAISR FT NMMKRIVVEKINGEQVFQSQWVETLRAAGAHIVPQGIRISAVTQQDTTFHARGRRLSQA FT LSDLEDQQEQHPRLRRGGFQSGGRR" FT misc_feature 799439..800131 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 799442..800134 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 799490..800113 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 799514..799537 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 799658..800704 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 800369..800701 FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature 800465..800710 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT misc_feature 803135..803179 FT /note="ScanRegExp hit to PS00678, Trp-Asp (WD) repeats FT signature." FT CDS complement(804154..804705) FT /transl_table=11 FT /locus_tag="DIP0828" FT /product="Putative DNA repair protein" FT /note="Similar to Streptomyces coelicolor G/U FT mismatch-specific DNA glycosylase Mug TR:Q9K3I5 FT (EMBL:AL390188) (160 aa) fasta scores: E(): 1.6e-21, 46.49% FT id in 157 aa, and to Escherichia coli G/U mismatch-specific FT DNA glycosylase Mug or B3068 SW:MUG_ECOLI (P43342) (168 aa) FT fasta scores: E(): 1.1e-15, 36.84% id in 171 aa" FT /protein_id="CAE49344.1" FT /translation="MSDRIPNSDLRLLIVGVNPGLWTAAVNAPFAHPGNRFWPSLDRAG FT IVTPRFDVSHGMSDEQEKHLAHLGIGMTNLVARATARADELTTQELIDGAQRVIHLANA FT LRPRVVAVVGITAYRAGFQHRKAVLGKQDPTLIADWPEDVALWVVPQPSGLNAHETVET FT LAQRWRDVWDDSALSSRSPH" FT misc_feature complement(804247..804696) FT /note="HMMPfam hit to PF02299, G:T/U mismatch-specific DNA FT glycosylase" FT CDS 804836..805642 FT /transl_table=11 FT /locus_tag="DIP0829" FT /product="Putative endonuclease" FT /note="Similar to Streptomyces coelicolor putative FT endonuclease VIII Nei or SC7C7.15c SW:END8_STRCO (O86820) FT (276 aa) fasta scores: E(): 2.5e-39, 40.87% id in 274 aa, FT and to Escherichia coli endonuclease VIII Nei or B0714 FT SW:END8_ECOLI (P50465) (262 aa) fasta scores: E(): 4.6e-14, FT 28.88% id in 277 aa" FT /protein_id="CAE49345.1" FT /translation="MPEGDSVFQLARRLSFMQGRTITHTSLRVPAYATMRFDGRTITKV FT WPYGKHLFMHIGSEILHTHLKMEGTWAVHRAGDRWRKPGHTARVVLHLDDAPHDPIEVV FT GHELGFVRVFPDHEYPQRIAHLGPDVLSESWPTRGEAEARKRLLGQPERAIGLALLDQK FT VLAGVGNEYRAEICFICGIHPATRIKDVDVDRVLSVTRRLMWANRFSPIRVTTGIRRPG FT ETSYVFGRNHKPCRRCGTLIRKSTLVDDPTTELERIIWWCPLCQSE" FT misc_feature 804836..805633 FT /note="BlastProDom hit to PD003680, PD003680" FT /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA FT glycosylase" FT CDS complement(805625..807250) FT /transl_table=11 FT /locus_tag="DIP0830" FT /product="Putative membrane protein" FT /note="Similar to Escherichia coli hypothetical 58.9 kDa FT protein YidE or B3685 SW:YIDE_ECOLI (P29211) (553 aa) fasta FT scores: E(): 1.8e-44, 33.21% id in 554 aa" FT /protein_id="CAE49346.1" FT /translation="MDIFVANPLLALFVIMAVGLAIGQVKIRGFSLGVAAVLFAGVGFA FT AVEPDIHIPHLVYILGLSIFVYSIGLESGHAFFALFKSQGVKQNALAITALALITGISI FT ALFSLIHLNGVTAAGLFTGAVTNTPAMAAVVDSLPSIFGDANKVHEVESLPLVAYSLAY FT PIGVLGVIAAIGLCAKWFRIDHVQEAHDAGVAVEDLFTRQIKVNHVVTGSDLVIDIHHT FT LGLEIIVSRIERDGQQTLPTASSRIHMGDVLSVVGTAEELDKAAHVLGDLLPGDPFHGH FT DLDYRRIFVSNQDLVGIPLAKLRPRLSGILITRVRRGDHDHVATPETVLQLGDRVRVVA FT AHDRMKSVTALFGDSYRRLSDFNLFPLVAGLALGLLVGMIEVPLPGGAALSLGSAGGPL FT VVALVLGAVGRSGRFVWQVPYGANLALRQLGITLFLAAIGTTAGASFRASLSDPASLTI FT IAVGAIITLTLAIFVLVVGYKVMKIPYGQTAGMLAGIQTHPAVLSYVSAMTKNDLPALG FT YTSVYPLAMIAKIIAAQVVLFALT" FT misc_feature complement(order(805637..805702,805817..805882, FT 805913..805978,806018..806083,806099..806164, FT 806717..806782,806912..806977,807014..807079, FT 807110..807160,807182..807247)) FT /note="10 probable transmembrane helices predicted for FT DIP0830 by TMHMM2.0" FT CDS 807364..807777 FT /transl_table=11 FT /locus_tag="DIP0831" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein SCD39.10 TR:Q9F2V1 (EMBL:AL392146) (138 FT aa) fasta scores: E(): 8.5e-26, 54.26% id in 129 aa" FT /protein_id="CAE49347.1" FT /translation="MKTILNLIWLITGGIWLALGYIVAGVVACALIITIPVGVASFRMA FT NYALWPFGRTVIEEVGGGSTLNAVSNVVWFIIAGFWLSLGHLTTAFAQAITIIGIPLAI FT ANLKMIPVTCFPFGKHIVDSDAIPFGYRPMSSM" FT misc_feature 807364..807453 FT /note="Signal peptide predicted for DIP0831 by SignalP 2.0 FT HMM (Signal peptide probability 0.657) with cleavage site FT probability 0.384 between residues 30 and 31" FT misc_feature order(807382..807483,807541..807609,807646..807714) FT /note="3 probable transmembrane helices predicted for FT DIP0831 by TMHMM2.0" FT CDS complement(807862..809505) FT /transl_table=11 FT /gene="pgi" FT /locus_tag="DIP0832" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /note="Similar to Escherichia coli glucose-6-phosphate FT isomerase Pgi or B4025 or Z5623 or ECS5008 SW:G6PI_ECOLI FT (P11537) (549 aa) fasta scores: E(): 2e-104, 52.71% id in FT 552 aa, and to Mycobacterium tuberculosis FT glucose-6-phosphate isomerase Pgi or Rv0946c or MT0972 or FT MTCY10D7.28 SW:G6PI_MYCTU (P77895) (553 aa) fasta scores: FT E(): 2.6e-133, 62.75% id in 545 aa" FT /protein_id="CAE49348.1" FT /translation="MSFDVTTTEPWATLSERYTAMKATTLRDLFASNPNRAQELSFEAA FT GLHVDLSKNLIDAETVAAFTALAKASGMREKIKAMFDGEHINNTEDRAVLHTALRLAVD FT AELNVDGQDVAADVHEVLGRMRDFATSLRNGSWRGYSNHTIKTIVNIGIGGSDLGPAMA FT TKALRTYATAGINAKFVSNVDPADMHAVLDELDPESTLFVVASKTFTTQETLANAHAAK FT RWLVAAAGGDESAVAKHFVAVSTNAEKVAEFGIDTKNMFGFWNWVGGRYSVDSAIGLSL FT MSVIGPMDFMRFLDGFRAMDEHFRTADFESNIPVLMGMLNVFYNDFFGAETHAVLPYSQ FT DLGRFPAYLQQLTMESNGKSVRHDGSAVTTNTGEIYWGEPGTNGQHAFFQLIHQGTKLI FT PADFIGFARPKEDLPTASGEGSMHDLLMSNFFAQTKVLAFGKTAEEIAAEGVSPELVAH FT KVMPGNRPTTTIMAEELTPFALGALIALYEHIVFVEGVIWDINSFDQWGVELGKQQAND FT LAPAVAGEVAVDSGDSSTDALISWYRSHRG" FT misc_feature complement(807889..809358) FT /note="HMMPfam hit to PF00342, Phosphoglucose isomerase" FT misc_feature complement(807970..808023) FT /note="ScanRegExp hit to PS00174, Phosphoglucose isomerase FT signature 2." FT misc_feature complement(807982..808023) FT /note="FPrintScan hit to PR00662, Glucose-6-phosphate FT isomerase signature" FT misc_feature complement(808021..808065) FT /note="FPrintScan hit to PR00662, Glucose-6-phosphate FT isomerase signature" FT misc_feature complement(808063..808119) FT /note="FPrintScan hit to PR00662, Glucose-6-phosphate FT isomerase signature" FT misc_feature complement(808429..808494) FT /note="FPrintScan hit to PR00662, Glucose-6-phosphate FT isomerase signature" FT misc_feature complement(808669..808725) FT /note="FPrintScan hit to PR00662, Glucose-6-phosphate FT isomerase signature" FT misc_feature complement(808672..808713) FT /note="ScanRegExp hit to PS00765, Phosphoglucose isomerase FT signature 1." FT misc_feature complement(809005..809064) FT /note="FPrintScan hit to PR00662, Glucose-6-phosphate FT isomerase signature" FT CDS 809708..811192 FT /transl_table=11 FT /locus_tag="DIP0833" FT /product="Putative succinate-semialdehyde dehydrogenase" FT /note="Similar to Escherichia coli succinate-semialdehyde FT dehydrogenase [NADP+] GabD or B2661 SW:GABD_ECOLI (P25526) FT (482 aa) fasta scores: E(): 2.9e-76, 44.37% id in 471 aa" FT /protein_id="CAE49349.1" FT /translation="MTHTTQTLDDRIHELLQRIPTELFIAGQFQPAHNGATLSVTNPSD FT GSELATVASASEKEARAALDAAEKAQPTWAATPARERSEILRRAYDLVIEHKDDLAMIQ FT SLELGRALPDSEAEVTYAAEFFRWFAEEAVRIRGDYRHNPTGNARIITHQQPVGPCLAI FT TPWNFPLAMGARKLAPALAAGCTMILKPASKTPLTMLYLAQLLAEAGVPHGVVSVLPTA FT NASVVSDLLHDARIRKLTFTGSTAVGQKLAAMAAEHSAAVSLELGGNAPYIVLDDADID FT TAAQAVAVAKMRGAGQVCIAANRFLVHSSIAEEFTQRVVNIMRGFTQGPATAPGVDFGA FT LSGDDQVSTVTTLVDDALSRGATKLLGDLPKGLPEHGSYYPATVLVDVPEDADIHCEEI FT FGPVVVISTFDDDDEAVARANDTKFGLAAYVFGSDLQRVLNVAERVDAGMIAVNKGALS FT DPAAPFGGVKESGLGREGGFEGIGEFLETKLISLPL" FT misc_feature 809789..811189 FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family" FT misc_feature 810497..810520 FT /note="ScanRegExp hit to PS00687, Aldehyde dehydrogenases FT glutamic acid active site." FT CDS complement(811189..811521) FT /transl_table=11 FT /locus_tag="DIP0834" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 11.8 kDa protein Rv0948c or MT0975 or MTCY10D7.26 FT SW:Y948_MYCTU (P71562) (105 aa) fasta scores: E(): 1.6e-14, FT 62.35% id in 85 aa" FT /protein_id="CAE49350.1" FT /translation="MAQWSTMSTADRDFVVRFPTGTSDPLSDAEIQQYREEIDRLDKEI FT LAAVKRRTEISRAIGKTRMGSGGTRLVHTREVAIINQFREEIGEEGPALAGILLRMGRG FT RLGEAR" FT CDS 811671..814088 FT /transl_table=11 FT /gene="pcrA" FT /gene_synonym="uvrD2" FT /locus_tag="DIP0835" FT /product="ATP-dependent DNA helicase" FT /EC_number="3.6.1.-" FT /note="Similar to Mycobacterium leprae ATP-dependent DNA FT helicase PcrA or UvrD or ML0153 SW:PCRA_MYCLE (Q9CD72) (778 FT aa) fasta scores: E(): 5.7e-165, 59.08% id in 804 aa, and FT to Bacillus subtilis ATP-dependent DNA helicase PcrA FT SW:PCRA_BACSU (O34580) (739 aa) fasta scores: E(): 4.1e-80, FT 42.76% id in 802 aa" FT /protein_id="CAE49351.1" FT /translation="MASQANPFLRQAQPVSQYTGADLTEGLNPQQKAAVEHYGSPLLIV FT AGAGSGKTSVLTRRIAYLMRVRGVQPQNILAITFTNKAAAEMRERVSSLVGPVAQRMWV FT STFHSTCVRILREQAQLVPGLNTNFTIYDSDDSKRLLSMISKDFSLDIKKFTPRLLATG FT ISNLKNELIDADQACADAESTKNPYETTIASVFAEYQKRLRASNAVDFDDLIGETVRIF FT REHPPVTEYYRRRFRHVLIDEYQDTNHAQYALIHELVGSGPDASELCVVGDSDQSIYAF FT RGATIRNIEEFERDYPNAETILLEQNYRSTQTILNAANSVIAQNENRREKKLWTALGSG FT DPIVGYVADNEHDEARFIANEVDALADKGVAYSDIAVMYRTNNSSRAVEDVFMRTGIPY FT KVVGGTRFYERKEIRDIIAYLRLIDNPDDAVSLRRIINTPRRGIGDKAVAFLSLHADNH FT NVGFHKALLDATEDKVSMLGARGRNAVTGFVDMMKGIREEAANKVNEVTGMPDIGDMVS FT YILDVTGYKAELEKSNDPQDGARLDNLNELVSVAREFSSEAANQVAYERMGAENQAPEI FT PELSEGEAAPGSLMAFLERVSLVADADQIPDNEQGVVTLMTLHTAKGLEFPVVFLTGWE FT DGQFPHLRALGEPKELAEERRLAYVGITRARRTLYLSRAMLRSSWGNPVTNPPSRFLSE FT IPDELMDWRREEPEHSYDNSWGMGYGSSNSRSYGSQNSRSYGSPRTPKLPKHSNKPAIA FT LNVGDRVNHEKYGLGTVTKVDKMAPADSVTIDFGSSGTVRLMLIGSVPMEKL" FT misc_feature 811749..813224 FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature 811806..811829 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT stem_loop 814107..814149 FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(814166..814882) FT /transl_table=11 FT /locus_tag="DIP0836" FT /product="Conserved hypothetical protein" FT /note="Similar to C-terminal region of Mycobacterium FT tuberculosis CDC1551 peptidase, M23/M37 family MT0977 FT TR:AAK45225 (EMBL:AE006983) (332 aa) fasta scores: E(): FT 2.2e-33, 45.25% id in 232 aa" FT /protein_id="CAE49352.1" FT /translation="MQQTQRTTGGKHRKQASPVKGRVAVVALATGAVSSAGATGASLAH FT ATHDNSTVKINLASDSTTQTNNDSPQVLSIAEFKPAASDLNQQLSKAIHYSQVVAEKDL FT EARTPKISVHTPAKGTLTSPFGMRWGTLHSGVDIANAMNTPIYSVMDGVVIDSGPASGY FT GQWIRVRHEDGTITVYGHMETLNVAVGETVTAGQQIAGMGTRGFSTGVHLHFEVHPGGG FT DAVDPQSWLAEHGIFI" FT misc_feature complement(814193..814444) FT /note="HMMPfam hit to PF01551, Peptidase family M23/M37" FT misc_feature complement(814745..814882) FT /note="Signal peptide predicted for DIP0836 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.728 between residues 46 and 47" FT misc_feature complement(814754..814819) FT /note="1 probable transmembrane helix predicted for DIP0836 FT by TMHMM2.0" FT CDS 815288..816742 FT /transl_table=11 FT /locus_tag="DIP0837" FT /product="Putative membrane protein" FT /note="Low similarity to Mycobacterium tuberculosis FT hypothetical 46.1 kDa protein Rv0955 or MT0982 or FT MTCY10D7.19c SW:Y955_MYCTU (P71555) (455 aa) fasta scores: FT E(): 1.9e-17, 28.01% id in 439 aa" FT /protein_id="CAE49353.1" FT /translation="MQGPGIKLRRFGRKSTDEAVKPVDPTFKSRVRAYFPIVLLPCVVA FT VIVIIIASLVSLLATNTTMAGLPATIAEGWLVLNLGPATGRGMSIGALPLMPAIFFMWV FT VSQRVFRAVKQRVSLADLAVVTLGVVGFPLLLTATACAMLYDASSVFDVASPNVAMALA FT TTFLVHGTALVIGMRTRLWKALARRYGVSEDVVDAARLAARLVRNLLLLALVVFVVLLG FT FHATDVAKSLEGYTPAGTMAVIIVSLLYLPNAVIAVLAVLLGASFEIGEGFVSLMGVGL FT VPTPAVPLFAAIPGEMAPYALGALVIPFAGVVVTLRGAVKRPAHILLTAAWAAVILAVL FT GALSSGHLGVYGYVGVLLWLSVALMMAWTLICGFAIFAVELFLKNRAEASVAIAQESEE FT NAPEEGEELEEAETGEPEEEQDVVEVEEPETYELVDDGLDNAEMLESLEINPATHDNDE FT KVENEGEEETTESDQESDSKPKDDTE" FT misc_feature order(815534..815602,815639..815707,815750..815818, FT 815912..815971,816014..816082,816101..816169, FT 816179..816247,816260..816328,816356..816424) FT /note="9 probable transmembrane helices predicted for FT DIP0837 by TMHMM2.0" FT misc_feature 816473..816709 FT /note="ProfileScan hit to PS50313, Glutamic acid-rich FT region." FT CDS 816768..817391 FT /transl_table=11 FT /gene="purN" FT /locus_tag="DIP0838" FT /product="5'-phosphoribosylglycinamide formyltransferase" FT /note="Similar to Corynebacterium ammoniagenes FT 5'-phosphoribosylglycinamide formyltransferase PurN FT TR:Q9RHX7 (EMBL:AB003159) (199 aa) fasta scores: E(): FT 1.7e-38, 65.73% id in 178 aa, and to Escherichia coli FT phosphoribosylglycinamide formyltransferase PurN or B2500 FT SW:PUR3_ECOLI (P08179) (212 aa) fasta scores: E(): 2.7e-19, FT 39.44% id in 180 aa" FT /protein_id="CAE49354.1" FT /translation="MVAVTSLSSTEQAAPIVVLASGSGTLLQAIIDNQERYRVVAVVAD FT VECFALERAKQAGIPTHIVPLEKGADRHEWNLALARTVERYEPTIVVSAGFMKILGEGF FT LRTFEGRTINTHPALLPAFPGAHAVRDALNYGVRVTGSTVHFVDSGVDTGAIIAQRPVS FT IERGEDESHLHERIKQVERQLIVSVLNSAVTEKESGEVSFTHER" FT misc_feature 816807..817334 FT /note="HMMPfam hit to PF00551, Formyl transferase" FT CDS 817381..818958 FT /transl_table=11 FT /gene="purH" FT /locus_tag="DIP0839" FT /product="bifunctional purine biosynthesis protein" FT /EC_number="2.1.2.3" FT /EC_number="3.5.4.10" FT /note="Similar to Mycobacterium tuberculosis bifunctional FT purine biosynthesis protein PurH [includes: FT phosphoribosylaminoimidazolecarboxamide formyltransferase FT (EC 2.1.2.3); IMP cyclohydorlase (EC 3.5.4.10)] or Rv0957 FT or MT0984 or MTCY10D7.17c SW:PUR9_MYCTU (P71553) (523 aa) FT fasta scores: E(): 1e-137, 68.06% id in 526 aa, and to FT Escherichia coli bifunctional purine biosynthesis protein FT [includes: phosphoribosylaminoimidazolecarboxamide FT formyltransferase (EC 2.1.2.3); IMP cyclohydrolase (EC FT 3.5.4.10)] PurH or B4006 SW:PUR9_ECOLI (P15639) (529 aa) FT fasta scores: E(): 1e-58, 45.25% id in 537 aa" FT /protein_id="CAE49355.1" FT /translation="MSDDRKQIKRALISVYDKTGLEDLARALNDAGVEIVSTGSTAAKI FT ADLGVPVTPVEQLTGFPECLEGRVKTLHPMVHAGILADTRKEDHLKQLDELNVAPFQLV FT VVNLYPFTQTVASGADFDACVEQIDIGGPSMVRAAAKNHPSVAVVVSPSRYSEIIAAVG FT NGGFTRAERTALAVDAFRHTASYDVAVATWMGEQIADADKPFAEWIGASYERANILRYG FT ENPHQAAALYTDPAAPAGLAQATQLHGKEMSYNNYTDSDAAWRAAWDHERPCVAIIKHA FT NPCGIAVSDVSIAEAHRTAHACDPVSAFGGVIASNREVSVDMAKQVSEIFTEVIIAPSY FT EDGAVDILSQKKNIRILVAPQPQRDELEQRQISGGVLVQRRDLVDAEGDTPANWTLAAG FT EGASEELLAELEFAWRAVRAVKSNAILLAQGGATVGVGMGQVNRVDAAKLAVERANSLA FT GDEQRAKGSVAASDAFFPFADGFEVLAQAGVRAVVQPGGSIRDAEVIEAANKAGVTMYL FT TGARHFAH" FT misc_feature 817411..817782 FT /note="HMMPfam hit to PF02142, MGS-like domain" FT misc_feature 817795..818730 FT /note="BlastProDom hit to PD004666, PD004666" FT misc_feature 817795..818742 FT /note="HMMPfam hit to PF01808, AICARFT/IMPCHase bienzyme" FT CDS 819223..819702 FT /transl_table=11 FT /locus_tag="DIP0840" FT /product="Putative membrane protein" FT /note="No significant database matches. Similar to CDS FT downstream DIP0841 38.272% identity in 162 aa overlap" FT /protein_id="CAE49356.1" FT /translation="MTYQPPAAPPQQWQPVPQRSNTALVAVVSVLAVLVVVFMAFAAYL FT LLSKDGGQSTNATETKVIAPPAADVKPAAPAPARQAPVQQARFSTYWAGSRNTSSAFAA FT NVYSAYVSNYNNTGSLNASIRAYSPVTGGYYDMWCGYSGGTTTCTGGDNAVVYIS" FT misc_feature 819295..819363 FT /note="1 probable transmembrane helix predicted for DIP0840 FT by TMHMM2.0" FT CDS 819871..820371 FT /transl_table=11 FT /locus_tag="DIP0841" FT /product="Putative membrane protein" FT /note="No significant database matches. Similar to CDS FT upstream DIP0840 38.272% identity in 162 aa overlap" FT /protein_id="CAE49357.1" FT /translation="MSSPAPQQVPKSPVAVVLIAVLATLCVVAALVLVGLKTGVIESND FT KTSATAASAPESKKNDAPEQVAMRPQYPTLPAGAMSANDAAKAGEPAGNFNNVWIGSSV FT TSPQFARAVRDAYASNCVATQQLNATLSVHSEVTGLDYSMQCSDNGQFVTCTGGNNAVV FT YIG" FT misc_feature 819913..819978 FT /note="1 probable transmembrane helix predicted for DIP0841 FT by TMHMM2.0" FT CDS 820408..820974 FT /transl_table=11 FT /locus_tag="DIP0842" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49358.1" FT /translation="MRPHIALSLIAISCLSVMTTGCTIGDVDSATTSRTTLGQPSPTLA FT QQQPAIAESALPPAPAPAPDSNATGLPSDLAAALESIVTDTQNELGGVVGIAIAGPEGV FT VTAGTQAGVPAWSTIKVPISIAALRANPGNDVLMRQAITVSDNDAARALWDSLGSPREK FT VGAVLAQGGDPQTQVNDQPGMRTFC" FT misc_feature 820408..820494 FT /note="Signal peptide predicted for DIP0842 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.435 between residues 29 and 30" FT repeat_region complement(820944..820965) FT /note="Possible inverted repeat" FT CDS complement(820987..822363) FT /transl_table=11 FT /locus_tag="DIP0843" FT /product="Putative transposase" FT /note="Similar to Escherichia coli possible transposase of FT IS1353 YahA SWALL:Q9WTH9 (EMBL:AP000342) (514 aa) fasta FT scores: E(): 8.7e-62, 41.25% id in 463 aa" FT /protein_id="CAE49359.1" FT /translation="MNRSYTNTQKRTALRVYKRTQSVTKTVRELGYPGRWTLYKWLREP FT KTPPQPRKQAKTLTHYPYEVKLRAVELFHNGWRPADIAQECCLHTHASVYAWAQRYREE FT GQWGLMSKKERAGHGRIPTKAALEKSLPDNPTQLKQQMATLLVEKAVLEKELEIIKKDV FT SVIPGQLSNKHKTDVVDALRSTFPLAMLLAASGLAASSFYYHLKKRRMPDKHAAIRSMV FT HRISSDSHNTYGYRRIWWQLRHLGITISEKVVRRLMREEAITVRFPKRKVKYSVSGEIS FT PAPPNLVNRCFHATAANTLWLTDISVFAVNEGRVYLSVIIDCFDGKVVAAKTSVNPTME FT LAESTLQAAIDAEGLPPDGSLVIHSDRGVHYRGRSWHSLTAKYGIVRSMSKKGCSPDNA FT ACEGFFGRMKNEMYYGKRWQTIQELDDAIAAYIEFYNNHRIKVSLNGMSIARYRMAAVA FT " FT misc_feature complement(821005..821487) FT /note="HMMPfam hit to PF00665, Integrase core domain" FT misc_feature complement(821752..821817) FT /note="1 probable transmembrane helix predicted for DIP0843 FT by TMHMM2.0" FT CDS 822365..822775 FT /transl_table=11 FT /locus_tag="DIP0844" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49360.1" FT /translation="MESSKIPSASPPVRPEFSVFGQTQWALGPQAMFARHMGCVAGSGP FT VLDAMSEIVSSQRYGLGSIPGARFKGGWGPNLSGSYDVRQFGLVPIGGVIVPVAVTAQA FT SDGSYESGQQLLTRMATKLASFNGNVPSAECV" FT repeat_region complement(822384..822405) FT /note="Possible inverted repeat" FT CDS 822822..823655 FT /transl_table=11 FT /locus_tag="DIP0845" FT /product="Putative citrate lyase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT citrate lyase, beta subunit MT2573 TR:AAK46877 FT (EMBL:AE007094) (273 aa) fasta scores: E(): 9.7e-35, 42.42% FT id in 264 aa, and to Escherichia coli citrate lyase beta FT chain CitE or B0616 SW:CILB_ECOLI (P77770) (302 aa) fasta FT scores: E(): 1.8e-06, 25.83% id in 298 aa" FT /protein_id="CAE49361.1" FT /translation="MTNRELILRPAVLFAPANRPEIIPKAAARADMVILDLEDGAGSID FT RNQAYANIRNAGLDPTTTFVRIVGPEDPHHAADLAFVKTTEYYNVIVPKIGAALPEGLD FT GLNVVPIIETPLAVINIASIAADPHVVGLYWGADDLTIALGGLYSRRRIDEPQPSSYRA FT PIEYARVQTLLHAAANGKWALDAVYQDFKDLDGLYTEALDSARMGFAAYPCIHPNQVDA FT VRRAFAPSAEQLEWAQRIAEETKKHPGAFQLDGEMVDTPLIALAHRLLQRHAAVD" FT CDS complement(823652..824320) FT /transl_table=11 FT /gene="amtR" FT /locus_tag="DIP0846" FT /product="Putative tetR family regulatory protein" FT /note="Similar to Corynebacterium glutamicum AmtR protein FT TR:Q9S3L4 (EMBL:AJ133719) (222 aa) fasta scores: E(): FT 9.6e-59, 70.18% id in 218 aa" FT /protein_id="CAE49362.1" FT /translation="MAGAVGRPRKNSPRRRGSTAREEILDASAELFTTQGFATTSTHQI FT ADAVGIRQASLYYHFPSKTEIFLTLLQSTVAPSTALAEAFADNEAPAALRLWALTATEC FT RLLLSTRWNVGRLYQLPVAASAEFASYQTQRDQLRQTFKNIASEILNPDDPRTDLPFHI FT ALSVIEMRSNDGVVPEPLRDDELPVLAIMLADAALAVVGAELPDDRVEWTLNLIRTLND FT " FT misc_feature complement(824111..824251) FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT misc_feature complement(824117..824188) FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT misc_feature complement(824138..824203) FT /note="Predicted helix-turn-helix motif with score 1536 FT (+4.42 SD) at aa 40-61, sequence TSTHQIADAVGIRQASLYYHFP" FT misc_feature complement(824210..824251) FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT CDS complement(824445..825479) FT /transl_table=11 FT /locus_tag="DIP0847" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49363.1" FT /translation="MYKRWVLRHILDSFSAGKWHVYRVRHEAGSLGTCIFHLTGRQVTL FT LHESLTELAELAPQCSDTPTVRGVLAESQDLVRNAIDHGERPQALVEWFSRLVTDVLHS FT EAIADMTGGAQLVLTGAIGRGDALPSSPIKWLTVGESHVDTTPVSDLITSVGLVAEHTR FT LGPTARTKQEWLSMIGTAQGSDLAVFADAGTWCLEEVVALPDHRPLLIDAIEHRPPTLR FT IHDGLPSRDMVVDIRKDLLYPIIAIARWAGVAAHSTDFSTRRRIPAAVAAGILTTSQAD FT FLRQAWDAGLQLQFRRWTDRVHSHAATAESLPAIQRSIYGASSRLVSDVIRALAQQYGI FT PLKS" FT CDS complement(825552..825800) FT /transl_table=11 FT /gene="rpsR2" FT /locus_tag="DIP0848" FT /product="30S ribosomal protein S18-2" FT /note="Similar to Mycobacterium tuberculosis 30S ribosomal FT protein S18-2 RpsR2 or Rv2055c or MT2116 or MTCY63A.05 FT SW:R18B_MYCTU (O86354) (88 aa) fasta scores: E(): 1.6e-13, FT 68.49% id in 73 aa" FT /protein_id="CAE49364.1" FT /translation="MKRNNIKKARMEQSRRPKKNPLKAAGIEKVDYKDINTLRQFISDR FT HKIRSRRVTGLTPQQQRQVATAVKNAREMALLPFTSR" FT misc_feature complement(825564..825596) FT /note="FPrintScan hit to PR00974, Ribosomal protein S18 FT family signature" FT misc_feature complement(825570..825725) FT /note="BlastProDom hit to PD002239, PD002239" FT misc_feature complement(825570..825731) FT /note="HMMPfam hit to PF01084, Ribosomal protein S18" FT misc_feature complement(825594..825638) FT /note="FPrintScan hit to PR00974, Ribosomal protein S18 FT family signature" FT misc_feature complement(825639..825662) FT /note="FPrintScan hit to PR00974, Ribosomal protein S18 FT family signature" FT misc_feature complement(825660..825692) FT /note="FPrintScan hit to PR00974, Ribosomal protein S18 FT family signature" FT CDS complement(825815..826120) FT /transl_table=11 FT /gene="rpsN" FT /locus_tag="DIP0849" FT /product="30S ribosomal protein S14" FT /note="Similar to Streptomyces coelicolor 30S ribosomal FT protein S14 RpsN or SCE9.37 SW:RS14_STRCO (Q9X8K9) (101 aa) FT fasta scores: E(): 8.6e-26, 70.29% id in 101 aa" FT /protein_id="CAE49365.1" FT /translation="MAKKSKIAKNEQRKEVVARFAERRNELKAIIKNPNTSDEDRLDAQ FT FELNRQPRDASPVRVRNRDSRDGRPRGFLRKFGVSRVRMREMAHRGELPGVRKSSW" FT misc_feature complement(825818..826120) FT /note="HMMPfam hit to PF00253, Ribosomal protein S14p/S29e" FT CDS complement(826124..826288) FT /transl_table=11 FT /gene="rpmG" FT /gene_synonym="rpmG1" FT /locus_tag="DIP0850" FT /product="50S ribosomal protein L33 type 1" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L33 type 1 RpmG1 or RpmG or Rv2057c or MT2117.1 or FT MTCY63A.03 SW:R331_MYCTU (O86356) (54 aa) fasta scores: FT E(): 7e-18, 75.92% id in 54 aa" FT /protein_id="CAE49366.1" FT /translation="MARNDIRPIIKLKSTAGTGYTYVTRKNKRNNPDRISLKKYDPVVR FT KHVEFREER" FT misc_feature complement(826127..826270) FT /note="HMMPfam hit to PF00471, Ribosomal protein L33" FT misc_feature complement(826133..826261) FT /note="BlastProDom hit to PD002595, PD002595" FT CDS complement(826292..826528) FT /transl_table=11 FT /gene="rpmB2" FT /locus_tag="DIP0851" FT /product="50S ribosomal protein L28-2" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L28-2 RpmB2 or Rv2058c or MT2118 or MTCY63A.02 FT SW:R28B_MYCTU (O86357) (78 aa) fasta scores: E(): 7.7e-22, FT 70.51% id in 78 aa" FT /protein_id="CAE49368.1" FT /translation="MSAICQVTGRQPGYGKSVSHSHRRTSRRWNPNVQRRKFYLPSEGR FT TITLNVSTKGLKVIDRDGIESVVAKIRARGEKI" FT misc_feature complement(826340..826522) FT /note="HMMPfam hit to PF00830, Ribosomal L28 family" FT CDS 826998..827264 FT /transl_table=11 FT /gene="rpmE" FT /locus_tag="DIP0852" FT /product="50S ribosomal protein L31 type B-2" FT /note="Similar to Streptomyces coelicolor 50S ribosomal FT protein L31 type B-2 RpmE3 or SCE9.34c TR:Q9X8K6 FT (EMBL:AL049841) (84 aa) fasta scores: E(): 1.4e-18, 60.75% FT id in 79 aa" FT /protein_id="CAE49369.1" FT /translation="MKKDIHPDYHPVVFQDAGTGHQFLTKSTATSDRTVAWEDGNEYPL FT IVVDVTSESHPFWTGAQRVMDTAGRVEKFNQRYGALARRKKNK" FT misc_feature 826998..827240 FT /note="HMMPfam hit to PF01197, Ribosomal protein L31" FT misc_feature 827001..827054 FT /note="FPrintScan hit to PR01249, Ribosomal protein L31 FT signature" FT misc_feature 827130..827177 FT /note="FPrintScan hit to PR01249, Ribosomal protein L31 FT signature" FT misc_feature 827175..827231 FT /note="FPrintScan hit to PR01249, Ribosomal protein L31 FT signature" FT CDS 827283..827456 FT /transl_table=11 FT /gene="rpmF" FT /locus_tag="DIP0853" FT /product="50S ribosomal protein L32" FT /note="Similar to Mycobacterium leprae 50S ribosomal FT protein L32 RpmF or ML0173 SW:RL32_MYCLE (Q9CD69) (57 aa) FT fasta scores: E(): 4e-11, 57.14% id in 56 aa" FT /protein_id="CAE49370.1" FT /translation="MAVPKRRMSRANTHARRSQWKADNVALQEVKINGQTVRIPRRLVK FT AAQLGLVEVEQF" FT CDS 827685..828377 FT /transl_table=11 FT /locus_tag="DIP0854" FT /product="Putative two component system response regulator" FT /note="Similar to Corynebacterium glutamicum response FT regulator TR:Q9F161 (EMBL:AF119221) (232 aa) fasta scores: FT E(): 2.4e-67, 79.31% id in 232 aa, and to Pseudomonas FT syringae transcriptional activator protein CopR FT SW:COPR_PSESM (Q02540) (227 aa) fasta scores: E(): 1.9e-32, FT 48% id in 225 aa" FT /protein_id="CAE49371.1" FT /translation="MKIVVVDDEQAVRESLCRSLSFNGYEVHLAQDGVEALEVIEREQP FT ELVILDVMMPRMDGLEVCRTLRGSGDDRPILVLTARDGVSDRVAGLDAGADDYLPKPFA FT LEELLARVRSLLRRAAAESVGSGSQGELSFEDLRLNPDTRDVTRGGRPISLTRTEFALL FT QLLMANSRRVLSRASILEEVWGYDFPTSGNALEVYIGYLRRKTESEGEPRLIHTVRGVG FT YVLRETAP" FT misc_feature 827685..828020 FT /note="HMMSmart hit to SM00448, cheY-homologous receiver FT domain" FT misc_feature 827685..828044 FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain" FT misc_feature 827688..828032 FT /note="ProfileScan hit to PS50110, Histidine-receiving FT module in bacterial sensor systems." FT misc_feature 827946..828023 FT /note="ScanRegExp hit to PS00217, Sugar transport proteins FT signature 2." FT misc_feature 828135..828350 FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C terminal" FT misc_feature 828374..828544 FT /note="Signal peptide predicted for DIP0855 by SignalP 2.0 FT HMM (Signal peptide probability 0.705) with cleavage site FT probability 0.338 between residues 57 and 58" FT CDS 828428..829918 FT /transl_table=11 FT /locus_tag="DIP0855" FT /product="Putative two component system sensor kinase" FT /note="Similar to Corynebacterium glutamicum sensor kinase FT TR:Q9F160 (EMBL:AF119221) (455 aa) fasta scores: E(): FT 6.5e-71, 46.98% id in 447 aa, and to Burkholderia FT pseudomallei sensor protein IrlS SW:IRLS_BURPS (O31396) FT (464 aa) fasta scores: E(): 4.6e-18, 26% id in 446 aa" FT /protein_id="CAE49372.1" FT /translation="MSGDARTSHFSRASLKSRISLLTASMVAIAVGMMLIVSYWSVSGT FT LRSSMDRTLNAKATALISRMDQPDFFFRSQYEIDKFREYNADTRISLRMPGWNYSVGDD FT LPMVKGGGDDVEGYSAATINGERVLTKVSDSGATVILARGMEATHKMITSLAITLLLVA FT GLGVLMAIATGVAVASTVLRPLRRLRNRVRYITETDDLKPIQVEGNDELSELTTRFNEM FT LEALRRSRQRQTELVADAGHELKTPLTSMRTNIELLMMMHNTDSASISEEDKQALQSDV FT IAQMEELSTLIGDLIDLARQETSEKTLEPIDLLDVVNSSVERVRRRRPDVRFEIQAIPW FT YLEGDSFALGRAILNLLDNASKWSPADGVVRFTMQVVEREDGDRVLHMDISDSGPGIPV FT EDREKVFDRFYRSVSARSTPGSGLGLAIVHSTIVRHGGTVTAGESDDGGARMRVELPGS FT VTDEELHSSSKTRVVQPSSTAERLDLARQRREERRNGK" FT misc_feature order(828485..828553,828890..828958) FT /note="2 probable transmembrane helices predicted for FT DIP0855 by TMHMM2.0" FT misc_feature 828902..829111 FT /note="HMMPfam hit to PF00672, HAMP domain" FT misc_feature 828962..829120 FT /note="HMMSmart hit to SM00304, HAMP (Histidine kinases, FT Adenylyl cyclases, Methyl binding proteins, Phosphatases) FT domain" FT misc_feature 829121..829339 FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain" FT /note="HMMSmart hit to SM00388, His Kinase A FT (phosphoacceptor) domain" FT misc_feature 829142..829804 FT /note="ProfileScan hit to PS50109, Bacterial histidine FT kinase domain." FT misc_feature 829457..829804 FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, phytochrome-like ATPase" FT /note="HMMSmart hit to SM00387, Histidine kinase-like FT ATPases" FT misc_feature 829583..829627 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 829637..829669 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 829682..829738 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT misc_feature 829754..829795 FT /note="FPrintScan hit to PR00344, Bacterial sensor protein FT C-terminal signature" FT CDS 830008..831294 FT /transl_table=11 FT /locus_tag="DIP0856" FT /product="Putative serine protease" FT /note="Similar to Mycobacterium tuberculosis putative FT serine protease Rv0983 or MTV044.11 SWALL:O53896 FT (EMBL:AL021999) (464 aa) fasta scores: E(): 3.8e-46, 43.84% FT id in 406 aa, and to Brucella abortus probable serine FT protease do-like precursor DegP or HtrA SWALL:DEGP_BRUAB FT (SWALL:Q44597) (513 aa) fasta scores: E(): 7.6e-25, 44.56% FT id in 285 aa" FT /protein_id="CAE49373.1" FT /translation="MTNPQNHDDARTSPTADQTAAFDRVENPYGNAHNVQEERLTEQSQ FT PLGAQEPPVPLEPETSKREKRRVSIGTAVAMTLVAAIASGTLTGVYSTNRAGNSGSTTR FT TQVAESLRQPVSQDHPAPVEGSVEDVAAKVLPSVVSILVATRNGSAEGSGSIISEDGYV FT MTNNHVVAGAEQGAARISVTLNDGSEHPAELIAGDPNTDVAVIKIKDVSGLPVMKFGDS FT NNLTVGQQVVAVGSPLGLSATVTSGIVSALNRPVRAGGSETGQSSLIDAVQTDAAINPG FT NSGGPLVDATGALIGMNSVIASLSAGGKSESGSIGLGFAIPSNFARRVASQLIEKGYAT FT QPMIGIQLISNANAKGAVIADVQPDGPGAHAGLRAGEVITKINDRYVDSADALIAAVRS FT SDFGQTVKLTVRGENDQNERQVDVTLTGE" FT misc_feature 830215..830283 FT /note="1 probable transmembrane helix predicted for DIP0856 FT by TMHMM2.0" FT misc_feature 830464..830994 FT /note="HMMPfam hit to PF00089, Trypsin" FT misc_feature 830488..830526 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 830563..830625 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 830686..830760 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 830809..830862 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 830875..830928 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT misc_feature 830989..831249 FT /note="ProfileScan hit to PS50106, PDZ domain profile." FT misc_feature 831001..831246 FT /note="HMMPfam hit to PF00595, PDZ domain (Also known as FT DHR or GLGF)." FT misc_feature 831031..831249 FT /note="HMMSmart hit to SM00228, Domain present in PSD-95, FT Dlg, and ZO-1/2." FT misc_feature 831121..831159 FT /note="FPrintScan hit to PR00834, HtrA/DegQ protease family FT signature" FT CDS 831333..831920 FT /transl_table=11 FT /locus_tag="DIP0857" FT /product="Putative molybdopterin biosynthesis protein" FT /note="Similar to Mycobacterium leprae putative molybdenum FT cofactor biosynthesis protein MoaB or ML0177 or MLCB373.29 FT TR:Q9Z5G5 (EMBL:AL035500) (181 aa) fasta scores: E(): FT 8.3e-28, 60% id in 150 aa" FT /protein_id="CAE49374.1" FT /translation="MEITDITQMDNVFDYIEPDPEFFRATEAEDNNSVLGGPRRALAVL FT IRDHSENTADNTATVVAELLGEGGFTVDAVVDVQADQHLIRNAIETAVVGGVDLVLTIG FT GTGVRPRDHAPEATREVLDQEVPGIAQAIRASGLACGSVDACTSRGISGVSASTVVVNM FT AASRSAIRDGMATMTPLVHYVIDQLREYSLND" FT misc_feature 831495..831722 FT /note="BlastProDom hit to PD002460, PD002460" FT misc_feature 831627..831668 FT /note="ScanRegExp hit to PS01078, Molybdenum cofactor FT biosynthesis proteins signature 1." FT CDS 831950..832135 FT /transl_table=11 FT /locus_tag="DIP0858" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49375.1" FT /translation="MKKARRRVVRLSDAEDYDRKADTAEFVSAIPDVAVPLEDGEEDQL FT QGLAFWKDQMPPHYGS" FT stem_loop 832142..832203 FT /note="Score 65: 23/24 (95%) matches, 0 gaps" FT CDS complement(832222..832626) FT /transl_table=11 FT /gene="mscL" FT /locus_tag="DIP0859" FT /product="large-conductance mechanosensitive channel" FT /note="Similar to Mycobacterium tuberculosis FT large-conductance mechanosensitive channel MscL or Rv0985c FT or MT1013 or MTV044.13c SW:MSCL_MYCTU (O53898) (151 aa) FT fasta scores: E(): 3e-16, 48.5% id in 134 aa, and to FT Escherichia coli, and large-conductance mechanosensitive FT channel MscL or B3291 or Z4661 or ECS4156 SW:MSCL_ECOLI FT (P23867) (136 aa) fasta scores: E(): 9.2e-11, 41.3% id in FT 138 aa" FT /protein_id="CAE49376.1" FT /translation="MLKGFKDFILRGNVVELAVAVVIGTAFTAIVTAFSEHLINPMIAA FT LGGADVSGLGFYLRSGNDATFMDFGAVITAALNFLIIAAVVYFILVAPMNKLNEMAARR FT KGVVEEEEAPASIEAELLEEIRDLLKNRNL" FT misc_feature complement(832231..832626) FT /note="HMMPfam hit to PF01741, Large-conductance FT mechanosensitive channel, MscL" FT misc_feature complement(832330..832626) FT /note="BlastProDom hit to PD007253, PD007253" FT misc_feature complement(832336..832365) FT /note="FPrintScan hit to PR01264, Bacterial FT mechano-sensitive ion channel signature" FT misc_feature complement(order(832354..832419,832525..832590)) FT /note="2 probable transmembrane helices predicted for FT DIP0859 by TMHMM2.0" FT misc_feature complement(832369..832395) FT /note="FPrintScan hit to PR01264, Bacterial FT mechano-sensitive ion channel signature" FT misc_feature complement(832522..832626) FT /note="Signal peptide predicted for DIP0859 by SignalP 2.0 FT HMM (Signal peptide probability 0.936) with cleavage site FT probability 0.687 between residues 35 and 36" FT misc_feature complement(832573..832617) FT /note="FPrintScan hit to PR01264, Bacterial FT mechano-sensitive ion channel signature" FT CDS complement(832733..833416) FT /transl_table=11 FT /locus_tag="DIP0860" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49377.1" FT /translation="MTSIKSILRTPGRRRETFLRRSLALSLVILALALAVFPRTESTTE FT VLRYATAVEAGTAVNRTHFTTAHVPQHLIPENALRPDDLLASAPNERITISAHTAGSIA FT TAVDFLDSSHTLSSVGNQLPFGEDQPINIVPIRLAEQSVSRVVQPGDVVDVIAANDAHD FT PHVVAAGGVIVFAPVPEKNTSSYGSDAVLIALPADQARIVASQSLAIPLTVVIAGARAR FT PPKTE" FT misc_feature complement(833252..833416) FT /note="Signal peptide predicted for DIP0860 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.321 between residues 55 and 56" FT misc_feature complement(833303..833353) FT /note="1 probable transmembrane helix predicted for DIP0860 FT by TMHMM2.0" FT CDS complement(833432..834016) FT /transl_table=11 FT /locus_tag="DIP0861" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 21.3 FT kDa protein ML0181 or MLCB373.33c TR:Q9Z5G2 (EMBL:AL035500) FT (197 aa) fasta scores: E(): 2.1e-14, 34.73% id in 190 aa" FT /protein_id="CAE49378.1" FT /translation="MSDALTLTAAKKNARNRIRAARLARSTADLHADNAAILNQLTALI FT RTINATRAAAYMPEVTEPGGVDFADNLTGILSELWIPKSLPNRQLVWGHYSGGDSVERG FT TFGILEPTTPSRSSDILHDVDLIIVPALGITPSGRRLGQGAGYYDRALAGVATPTVAIL FT FDSEVNTTIPFEPHDATCDWIITPEGTKQVT" FT misc_feature complement(833456..833992) FT /note="HMMPfam hit to PF01812, 5-formyltetrahydrofolate FT cyclo-ligase family" FT CDS 834145..835065 FT /transl_table=11 FT /locus_tag="DIP0862" FT /product="Putative urydyltransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT UTP--glucose-1-phosphate uridylyltransferase MT1022 FT TR:AAK45269 (EMBL:AE006986) (306 aa) fasta scores: E(): FT 3.2e-65, 64.8% id in 287 aa, and to Bacillus subtilis FT UTP--glucose-1-phosphate uridylyltransferase GtaB FT SW:GTAB_BACSU (Q05852) (292 aa) fasta scores: E(): 1.4e-32, FT 40.67% id in 295 aa" FT /protein_id="CAE49379.1" FT /translation="MTSPKSGNSCAVRTVIVPAAGLGTRFLPATKTVPKELLPVVDTPG FT IELIAEEAAQLGAMRLAVITAPKKQEVLDHFNRFPELEATLESRGKKDQLAKVVRAAEL FT IQPVSVVQETPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPMGVVEKMVEVRRQLGG FT SVLCAFDVPREDVYNYGVFDIEECDYDGPYQVKSVKGMVEKPAVEDAPSTFVATGRYLL FT DRAIFDALRRITPGAGGELQLTDAIALLINEGHPVHILVHDGKRHDLGNPGGYIPAVVD FT FGLSDPTYGPHLKKVLRTILEEHGA" FT misc_feature 834184..834999 FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase" FT CDS 835162..836427 FT /transl_table=11 FT /locus_tag="DIP0863" FT /product="Putative molybdopterin biosynthesis protein" FT /note="Similar to Mycobacterium tuberculosis molybdopterin FT biosynthesis protein MoeA or Rv0994 or MT1023 or MTCI237.08 FT SW:MOEA_MYCTU (O05577) (426 aa) fasta scores: E(): 1.1e-89, FT 58.35% id in 425 aa, and to Escherichia coli molybdopterin FT biosynthesis protein MoeA or ChlE or BisB or NarE or B0827 FT SW:MOEA_ECOLI (P12281) (411 aa) fasta scores: E(): 1.1e-17, FT 29.58% id in 409 aa" FT /protein_id="CAE49380.1" FT /translation="MRSVEQQLALVTQSAVAPEPVRIAIAEALGLMCAEEVQASRALPG FT FDQAAIDGYAVRAVDVGGERGLGRPIDAPIGPIETSLPVVGEVPAGSQRPLRLQPKQAV FT RVHTGAPLPTLSDAVIPLEWTDCGRKRMTAHRPVRSGEFVRHAGDDIRPGDVAVSDGAI FT LSPAHIGLLAAVGRSKVLVYPRPRMSVISVGHELVEIDREPSLGQVFDVNSYALAAAGR FT DAGADVHRVGIAAGEPRRLREIVESQLLRSEIIVIAGAVGGSGSEEIRRILSDLGEIDT FT TRVAMHPGSVQGFGLLGENQTPVFLLPSNTVSSLVIFEMFIRPVVRMSLGKRSSQRRLV FT RARALNHVGSKVGRRGYIRARLMRDAQTQDYLVEGLGGANGAPAHLLAGLAEANAMIKI FT PEDVNEVRPGDIVEVLFMSQGR" FT misc_feature 835162..836412 FT /note="HMMPfam hit to PF00994, Molybdenum cofactor FT biosynthesis protein" FT misc_feature 835225..836403 FT /note="BlastProDom hit to PD002460, PD002460" FT CDS 836463..837125 FT /transl_table=11 FT /locus_tag="DIP0864" FT /product="Putative acetyltransferase" FT /note="Similar to Mycobacterium leprae possible FT acetyltransferase RimJ or ML0184 TR:Q9CD65 (EMBL:AL583917) FT (214 aa) fasta scores: E(): 3.6e-35, 47.03% id in 202 aa" FT /protein_id="CAE49381.1" FT /translation="MRSDRAAVHPRHPGWPEATPAVFTPANVHVRLRPLDKNDKSAWRM FT MRLSDQRFLEPVEPTVEDTWQSAHSSTAWRSYIFSLRQAAFAGSLVPMSIEANGQFVGQ FT LTIGSIQHGISSDAWIGYWVHSSVTGQGIATAACALGVDHAFRRVRVHRLTATYLPHNI FT GSQKVLVRCGFRHEGYLERNLHINGMWRDHYLMAQTNDEFTSPCVDRLIASRFLRRA" FT misc_feature 836739..836987 FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family" FT CDS 837252..838388 FT /transl_table=11 FT /locus_tag="DIP0865" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 39.5 kDa protein Rv0996 or MTCI237.10 TR:O05579 FT (EMBL:Z94752) (358 aa) fasta scores: E(): 1.8e-13, 30.27% FT id in 370 aa" FT /protein_id="CAE49382.1" FT /translation="MSGTVVIVLIVLVWLFVLAPWLLRGQKPIRKAGEGFDDTRVVYEG FT GSEQLQPRHHPKVGPHDVHTGYEADSAEHELEYAEVTEVIEQSAEVEEEDTQGPLIDQD FT PATTLGDVFAHAKEKIGAKRSRGETPNASVMPQVIEGEIVAELPAPEVVADEDSAHDET FT SLDAVDDGDEVARYDFDDAYVGPDDLMYPSDNDVVTSLDRSEATAEPVLDDDSDLTDEE FT RAFAERRSHRGSWDPESEAQAVVSRQQRRQRTVMGLGAAVIVSLVAAVVFGGWAWAGAG FT GCAGLLALYLWALRRQVIAEQALRRRRIQQLRRARWGVRNSADEELGIPNRLRRPGAVV FT LEIDDESPDFEYLDVVADSRRDGQTPHFDGADHHRRVG" FT misc_feature order(837261..837320,838020..838088) FT /note="2 probable transmembrane helices predicted for FT DIP0865 by TMHMM2.0" FT misc_feature 837714..837911 FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT CDS 838431..838844 FT /transl_table=11 FT /locus_tag="DIP0866" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae putative integral FT membrane protein ML0956 TR:Q9CCC8 (EMBL:AL583920) (169 aa) FT fasta scores: E(): 2.1e-11, 39.51% id in 124 aa" FT /protein_id="CAE49383.1" FT /translation="MDQPIVRDIALLVFRAVLGIVFVAHGFERFFRTGLVETTGQFSAM FT GVPQPKLSAYLTATGELLGGSLLVVGMLTTFVAGALALLVVAAIYFVHLDHGFFVADSG FT MEYPLVMAVALLMIVVFGAGRASIDGVLSRADL" FT misc_feature order(838443..838511,838629..838697,838755..838814) FT /note="3 probable transmembrane helices predicted for FT DIP0866 by TMHMM2.0" FT CDS 838831..839493 FT /transl_table=11 FT /locus_tag="DIP0867" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49384.1" FT /translation="MLTCSTIQAALSARLDGETPGIDDDVIDTHLDSCPDCQAYFDQAV FT ALNRSLAFRIPEAAYTEAPDLIDDILANVEPQWRKQAATRAWNTALSRVSIVVAGLLWL FT AWAINLIAITSTEIDPLANRVSMEAASLRFAIAFSLFFAAWQPRVVGGLLPVVAAVWTF FT EVGFGIRDIFLAPEAGDTMIQLGLLFLAVVTLSWLWISDKGWVIVREMVRSLSSDPR" FT misc_feature order(839110..839178,839206..839265,839278..839346, FT 839374..839433) FT /note="4 probable transmembrane helices predicted for FT DIP0867 by TMHMM2.0" FT CDS complement(839502..841211) FT /transl_table=11 FT /locus_tag="DIP0868" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae putative membrane FT protein ML0192 TR:Q9CD61 (EMBL:AL583917) (510 aa) fasta FT scores: E(): 8e-80, 42.74% id in 496 aa" FT /protein_id="CAE49385.1" FT /translation="MGKLPNTPFHHQPSLRWTPKPRRLNRVTSHSAPDTAKDQPRSRLT FT AAWTRRRRYAPRFPSAAHPHAPHALQWSRYDTISTAIITIAAFLMRAIGITSATSAHTP FT VFDEKHYVPQAWDMVESWINPITGGIESNPGYGLVVHPPLAKQLIAYGEALFGYTPLGW FT RAVTALCGTLTIVAIMALTRRLTLSSRAATLAGIIALFDGVLLVTSRFGMLDIIQVLFI FT VTAAWTLCRDHQQVYACMYNAWSQKLLDTDLGPRIGFRWWRFATGVLLGCAVSVKWSGL FT YYIMFFGILAVALDAWRRRIFGARNATLGMLLKDAFPAFASLVLVPLAVYTWSWRAWFA FT SETSVFRHAVATGDVADNSILRLFPDAVASWLYYHAEVLEFHASLTSSSGHSHPWDSKP FT WSWLAATRPILYYSSTDISCAFGSCRRMIYLFGTPAIWWLTVPVVCWALWEMIIRRRAE FT YLIPWVSFMAGFLPWLASYDRQMYFFYATALVPFTIVMLAITLNHLMDAGAYRRLRPAA FT FWKGRVFPTGRILAICYLAVVIAMFFYFSPLLYGFVIPDAWFNAMMWLPSWR" FT misc_feature complement(order(839550..839615,839700..839765, FT 839781..839831,839868..839933,840195..840260, FT 840321..840377,840570..840635,840651..840716)) FT /note="8 probable transmembrane helices predicted for FT DIP0868 by TMHMM2.0" FT misc_feature complement(840198..840971) FT /note="HMMPfam hit to PF02366, FT Dolichyl-phosphate-mannose-protein mannosyltransferase" FT CDS 841745..843490 FT /transl_table=11 FT /gene="betP" FT /locus_tag="DIP0869" FT /product="glycine betaine transporter" FT /note="Similar to Corynebacterium glutamicum glycine FT betaine transporter BetP SW:BETP_CORGL (P54582) (595 aa) FT fasta scores: E(): 7.8e-154, 70.87% id in 563 aa, and to FT Bacillus subtilis glycine betaine transporter OpuD FT SW:OPUD_BACSU (P54417) (512 aa) fasta scores: E(): 1.1e-76, FT 43.52% id in 517 aa" FT /protein_id="CAE49386.1" FT /translation="MIEGEGLIAEATAAPEKEITFEGEDDNAGVDWKVTAPAMVIVLAV FT VAWGILGTTSFASFAASSLGYIVDSFGWAFIFFTTVFLIFAIAIALSNFGTIKLGRNDE FT APEFSTTSWIAMMFAAGMGIGLMFYGASEPLSNYLNGVPGHEPRSVGHAMSTTLLHWTL FT HPWAIYGIFGLAIAYSTFRLGRRQLLSSAFIPLIGEHGAKGWIGRIVDILAIIATIFGT FT ACSLGVGATQISAGLDAAGVVKDPGMSTVLAIVSVLTLAFLLSAMSGVGKGIQYVSNAN FT MVLAALLAIFVFVLGPTVTILNLIPGSLGAYLSNFFEMVGRTAESADGSAGEWLGSWTI FT FYWAWWISWSPFVGMFLARISRGRTIREFLFGVMLVPAAVSVVWFAIFGGTAIHFEQEG FT RSIYGDGSAEYQLFELLHALPGGKIAGVVAVILLATFFITSADSASTVMGSMSQNGQTD FT ANKYVSAAWGLLVALIGMTMLVSGGDDVLSNLQNITIIAASPFLVVIVILMFAVLKDLR FT NDEIYLDYREQQRFASRLARERRIHLEHEKRKKAREKRRNAKEHKEHKVRVPRAGKGDH FT LRHRR" FT misc_feature 841844..843301 FT /note="HMMPfam hit to PF02028, BCCT family transporter" FT misc_feature order(841856..841924,841967..842035,842069..842137, FT 842228..842296,842378..842446,842489..842557, FT 842591..842659,842744..842812,842849..842917, FT 842999..843067,843128..843187,843215..843283) FT /note="12 probable transmembrane helices predicted for FT DIP0869 by TMHMM2.0" FT misc_feature 841985..843301 FT /note="BlastProDom hit to PD010111, PD010111" FT misc_feature 842753..842782 FT /note="ScanRegExp hit to PS01303, BCCT family of FT transporters signature." FT CDS 843569..845032 FT /transl_table=11 FT /locus_tag="DIP0870" FT /product="Putative membrane protein" FT /note="Similar to Staphylococcus aureus (strain N315) FT hypothetical protein SA2305 or SAV2517 TR:BAB58679 FT (EMBL:AP003137) (359 aa) fasta scores: E(): 1.3e-35, 32.55% FT id in 344 aa" FT /protein_id="CAE49387.1" FT /translation="MLKKTITIAMAFVGIVIGAGFATGQEVLQYFVSFGMMGIFGAALS FT AVIMTVTGMASIQLGSYFLANDHGSVLRRISHPIVARILDVAVLITLFATGVVMLAGSG FT SNLNQQFGWPAWAGSLLMLVLVMVAGLLDVDKLTAVIGSITPLIIIFVIVAIVYALSTS FT SADIDTLNQAAATINSATPHWALASLNYVGLALMMGVSMAIIIGGNNVDPRAAGLGGLT FT GGVIYGVMLTFTALALYRVADKVAADDVPMLTIINEIHPILGTVMSLVIVGMIFNTALG FT MFYAFAKRATSSRRALFYPVYLIASALGFAASFLGFKKLVGVVYPALGYLGILLVVVVA FT VAWLRGFAKIRDERARRDKIHNLIKRKLDPTKRFSSKQQRQLDRLTRESNLKPSELKET FT IREEVVEELAGAADGDDVDAVIDEAAGITTTYEPIEFEDTTVSVEDTSLGLPSHARPMS FT ELEDLTTFEEDIAEEAATNTPADKPAAKH" FT misc_feature 843569..843694 FT /note="Signal peptide predicted for DIP0870 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.264 between residues 42 and 43" FT misc_feature order(843587..843652,843695..843763,843800..843868, FT 843896..843964,843983..844051,844121..844189, FT 844226..844294,844352..844420,844454..844513, FT 844541..844609) FT /note="10 probable transmembrane helices predicted for FT DIP0870 by TMHMM2.0" FT CDS 845142..846017 FT /transl_table=11 FT /locus_tag="DIP0871" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 29.7 kDa protein Rv1003 or MT1032 or MTCI237.19 FT SW:YA03_MYCTU (O05588) (285 aa) fasta scores: E(): 2.1e-51, FT 58.54% id in 275 aa" FT /protein_id="CAE49388.1" FT /translation="MTDQPIIDYRFLEPLPRGIILAATPLGNIGDASPRLAQALAQAHV FT VAAEDTRRTRALAQALGVEITGQVLSNFDHNEQGRAQQLVEMARTHTVVVVTDAGMPIV FT SDPGFPLVEAAHKAGVPVTCFPGPSAVPTALALSGLHVGKFAFDGFAPRKQGQRRAWLE FT SLQQEQRAVCFFESPHRIAATLADAAEVLGAKRRAAVARELTKTFEEVRRGGLGELAEW FT AAKGIKGEVSVVIEGVQHVQHEDVHSLVAVVEERVLAGERLKSACGEVAAHYGVSKKQL FT YDAVLESRAE" FT misc_feature 845193..845801 FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT misc_feature 845286..845843 FT /note="BlastProDom hit to PD007098, PD007098" FT CDS 846041..847873 FT /transl_table=11 FT /gene="metG" FT /locus_tag="DIP0872" FT /product="methionyl-tRNA synthetase" FT /EC_number="6.1.1.10" FT /note="Similar to Pyrococcus horikoshii methionyl-tRNA FT synthetase MetG or PH0993 SWALL:SYM_PYRHO (SWALL:O58721) FT (723 aa) fasta scores: E(): 1.6e-81, 41.23% id in 536 aa, FT and to Escherichia coli methionyl-trna synthetase MetG or FT B2114 SWALL:SYM_ECOLI (SWALL:P00959) (676 aa) fasta scores: FT E(): 2.3e-36, 30.65% id in 535 aa" FT /protein_id="CAE49389.1" FT /translation="MNNRVLVSVAWPYANGPRHIGHVAGFGVPSDVFARYQRMSGAEVL FT MVSGTDEHGTPLLVQADKEGVSVKELADRYNRQIVEDLAGLGLSYDLFTRTTTRNHYAV FT VQDLFKGLYENGYMIKETTMGAVSPSTGRTLPDRYIEGTCPICGASGARGDQCDNCGNQ FT LDPADLINPVSKINGETPKFIETEHFLLDLPALADALAAWLKDRKDWRPNVLKFSLNLL FT EDLRPRAMSRDIDWGIPIPVEGWQDNGAKKLYVWFDAVVGYLSASIEWAYRTGDPEAWK FT KWWNDPESSGYYFMGKDNITFHSQIWPAELLGYQGKGAKAGSVHSLGELNLPTEVVSSE FT FLTMSGSKFSSSKGIVIYVKDFLKEFGADPLRYFIAVAGPENNDTDFTWDEFVRRVNNE FT LANGWGNLVNRTVSMAYKNFGEVPTPGELTESDKKILAQAEEAFGVVGEALAHSRFKQG FT ITHAMHIVGEANAYIAEQEPWKLAKDESQRERLATVLWTALQVVSDCNVLLTPYLPHIA FT QQVHETLGRDGVWAAKPQIVEVTDDMPVEPIGVGIPEAGQTYPVIMGDYAAQQARWARI FT DVQPGTALSKPKPLIAKLDPELGETGPEWAPVNP" FT misc_feature 846044..847381 FT /note="HMMPfam hit to PF00133, tRNA synthetases class I (I, FT L, M and V)" FT misc_feature 846059..846100 FT /note="FPrintScan hit to PR01041, Methionyl-tRNA synthetase FT signature" FT misc_feature 846158..846202 FT /note="FPrintScan hit to PR01041, Methionyl-tRNA synthetase FT signature" FT misc_feature 846302..846337 FT /note="FPrintScan hit to PR01041, Methionyl-tRNA synthetase FT signature" FT misc_feature 846797..846832 FT /note="FPrintScan hit to PR01041, Methionyl-tRNA synthetase FT signature" FT misc_feature 846917..846964 FT /note="FPrintScan hit to PR01041, Methionyl-tRNA synthetase FT signature" FT misc_feature 847235..847270 FT /note="FPrintScan hit to PR01041, Methionyl-tRNA synthetase FT signature" FT misc_feature 847415..847447 FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT CDS 847895..848749 FT /transl_table=11 FT /locus_tag="DIP0873" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum Mg-dependent FT DNAse CGL0908 SWALL:Q8NRY3 (EMBL:AP005276) (277 aa) fasta FT scores: E(): 3.7e-81, 73.74% id in 278 aa, and to FT Mycobacterium tuberculosis hypothetical protein Ycfh Rv1008 FT or MTCI237.25 TR:O08343 (EMBL:Z94752) (264 aa) fasta FT scores: E(): 4.4e-40, 44.61% id in 260 aa" FT /protein_id="CAE49390.1" FT /translation="MSKKKPRPIPVPADTIPGLIDAHTHIASCGATEQDEVDAFVQRAL FT AAGVERICTVGDGLAEAEFALQAAQMNSRVFAACAIHPTRARELDQAARNRLTEMAHDP FT RCVAIGETGIDTYWITHDPDNTADLETQEEALRWHIDLAVATGKALMIHNREGDDHLMR FT ILEDSPQPPETILHCFSSPIDVAKQALDRGYVLSFAGNVTFKRNEELREAARIAPISQL FT LIETDAPYMTPEPFRGARNESALIGHTALCVAASRGESVADCVAGISATFDRVYGVDTS FT FGA" FT misc_feature 847964..848725 FT /note="HMMPfam hit to PF01026, TatD related DNase" FT CDS 848894..850051 FT /transl_table=11 FT /locus_tag="DIP0874" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 38.1 kDa protein Rv1009 or MTCI237.26 TR:O05594 FT (EMBL:Z94752) (362 aa) fasta scores: E(): 1.8e-39, 38.71% FT id in 372 aa" FT /protein_id="CAE49391.1" FT /translation="MGNRQKAKINKGASSRAVPMRIVAGGVIASLAVGGVTAQQLKKDI FT TVDLNGEHISLATFSRDVDGVLRQAGVNVGEKDLVYPAPSETVADNDTVTVRTSKQVSV FT VIDGVKKDVTTNAITVEELFSQLNDVPAALSSASLNVEKGARIPAEGMALDVVTPKIIS FT LTTGDKTVFTQIAAATVADVLKERGIDVDADDVVMPALDTAVSKDMNIKVDKVDSREEK FT ITEKFDEPATYIEDAEQLEGEETLVTPGTQGERTVTRKIVTVNGVETANEVVNEEIITP FT GVAATIKRGAKKPTTASAAAVASGSVWDQLAQCESGGNWSINTGNGFTGGLQFVDSTWL FT GLGGGVYAPQAYLATREQQIAIAEKVLAAQGWGAWPACTAKLGLR" FT misc_feature 848894..849007 FT /note="Signal peptide predicted for DIP0874 by SignalP 2.0 FT HMM (Signal peptide probability 0.990) with cleavage site FT probability 0.658 between residues 38 and 39" FT misc_feature 848942..849010 FT /note="1 probable transmembrane helix predicted for DIP0874 FT by TMHMM2.0" FT CDS 850103..850990 FT /transl_table=11 FT /locus_tag="DIP0875" FT /product="Putative dimethyladenosine transferase" FT /note="Similar to Streptomyces coelicolor putative FT dimethyladenosine transferase SCE66.28c TR:Q9K3R5 FT (EMBL:AL359989) (286 aa) fasta scores: E(): 6.8e-58, 60.62% FT id in 287 aa, and to Bacillus subtilis dimethyladenosine FT transferase KsgA SW:KSGA_BACSU (P37468) (292 aa) fasta FT scores: E(): 8.1e-26, 35.33% id in 283 aa" FT /protein_id="CAE49392.1" FT /translation="MEDQASAQLLGPVEIRQLAEKLDVTPTKKLGQNFVHDPNTVRMIV FT SAADLNSDDHVIEVGPGLGSLTLALLDTAQKVTAVEIDPRLAQQLPLTVAERAGQFADR FT LNLIHKDALTVAPDDIDHPTALVANLPYNVSVPVLLHLLQIFPTIRRVLVMVQAEVADR FT LAADPGNKVYGVPSVKASFYGNVRRAGSIGKNVFWPAPKIESGLVRIDVFDPEHQPWPV FT TDDMRKAVFPLIDSAFAQRRKTLRAALSGHFGSGPAAEEALRTAGIDPILRGEKLDIAD FT FVRLARVTAAQEQA" FT misc_feature 850196..850963 FT /note="HMMPfam hit to PF00398, Ribosomal RNA adenine FT dimethylase" FT misc_feature 850247..850441 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 850268..850351 FT /note="ScanRegExp hit to PS01131, Ribosomal RNA adenine FT dimethylases signature." FT CDS 850987..851922 FT /transl_table=11 FT /locus_tag="DIP0876" FT /product="Putative kinase" FT /note="Similar to Mycobacterium tuberculosis FT 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE or FT Rv1011 or MT1040 or MTCI237.28 SW:ISPE_MYCTU (O05596) (306 FT aa) fasta scores: E(): 5.1e-36, 50.79% id in 315 aa, and to FT Escherichia coli 4-diphosphocytidyl-2-C-methyl-D-erythritol FT kinase IspE or Ipk or B1208 or Z1979 or ECS1713 FT SW:ISPE_ECOLI (P24209) (283 aa) fasta scores: E(): 6.2e-05, FT 27.1% id in 273 aa" FT /protein_id="CAE49393.1" FT /translation="MTSYAITAVASSKVNLHLGVGNARDDGYHELVTVFQSLSLHDTIT FT VTPAADDMHDAEDQGIVATLSVSGDSAQAVPTDATNLAWQAAEKMYQAHRRNGGAPAKR FT VHIAIDKGIPVAGGMAGGSADAAATLAAMAQYLGNTNTEQEILSIAAELGSDVPFTYLG FT DTRLGTGRGEQLVPVLSRGTYHWALAFSAQGLSTPEVFRKIDQMDRQPHLDVTALNAAL FT ITGDPHKVAAHLHNDLQAAALSLRPELRTILEQGRAAGALAGIVSGSGPTCAFLCEDAE FT TAQAVAAELSVHYRTAVATGPVRGAHVKGH" FT misc_feature 850987..851133 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT CDS 851922..853730 FT /transl_table=11 FT /locus_tag="DIP0877" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor putative ABC FT transporter ATP-binding subunit SCE66.26c TR:Q9K3R7 FT (EMBL:AL359989) (604 aa) fasta scores: E(): 2.3e-97, 54.75% FT id in 610 aa" FT /protein_id="CAE49394.1" FT /translation="MANLINLENVSKSFGLTTLLDSVSLGVQTGDRIGVVGLNGGGKTT FT LLEILTGIEPPDSGRVSHNTDLRMAVVTQRAELNPADSVADVVLSPLGLETFEWASNAK FT VREVLGGLGIVDLGLDTEVGSLSGGERRRVNLAAALVKDLDLIVLDEPTNHLDVEGVQW FT LADHLLSRKLAIVVVTHDRWFLDTIATQTWEVHDGTVDAYEGGYNDWTFARAERARQAD FT AVEQRRQNLARKELAWLRRGAPARTSKPRYRIEAAEALIADVPEPRNKIELMAFAKQRQ FT GKVVVELEDATIATPDGRTLVDNLTWRLAPGERIGLVGVNGSGKTTLLRTIAGDHALTA FT GKRIEGRTVRLGWLRQELDDLDPTMRVLDAVEDVASYITLGKKEISASQLAERLGFSAK FT RQRTPVGDLSGGERRRLQLTRVLMSEPNLLLLDEPTNDLDIDTLQELESLLDGWAGTLI FT VISHDRYLIERIADSTWALFGDGQLTNLPGGIDEYLKRREALAAQNQSGVVNLGGNNEA FT ASAPVPEKKLSSQEQREITKQMNALERKMGKLDPKIAKINEEMAAAAQRVDTAELTRLD FT AELNELTAQREGLEMEWMDLGERLES" FT misc_feature 852006..852518 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 852009..852515 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 852015..852092 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 852030..852053 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 852297..852341 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 852297..852464 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 852852..853361 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 852855..853355 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 852861..852923 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 852876..852899 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 853143..853349 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 853749..854072 FT /transl_table=11 FT /locus_tag="DIP0878" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 12.0 kDa protein Rv1117 or MTCY22G8.06 TR:O06569 FT (EMBL:Z95585) (107 aa) fasta scores: E(): 3.6e-13, 43.92% FT id in 107 aa" FT /protein_id="CAE49395.1" FT /translation="MILINVKYQVRPEYVDTFLDEVKWFTDACRAEEGNLFFDWFKNPE FT KDNEFILVEGFKDGSDVAHVQSEAFQRACEEIPRYLLETPKIINVSIPGKTEWDTMAEF FT VVE" FT misc_feature 853749..854030 FT /note="HMMPfam hit to PF02619, Uncharacterized ACR, YneC FT family COG1359" FT CDS 854176..854565 FT /transl_table=11 FT /locus_tag="DIP0879" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49396.1" FT /translation="MIKTIALAAIGATAVAGTAGGAWIYHNSNQISSTPQVAQVHIDGM FT LKPNNEIMISSPCAPTDTHAKLTTSFGATADLTPAADSGELIGFVTAPNNIGPGPANGY FT HTVTVTCDSGLTGTATFPSAGNGGQ" FT misc_feature 854185..854253 FT /note="1 probable transmembrane helix predicted for DIP0879 FT by TMHMM2.0" FT CDS 854590..855129 FT /transl_table=11 FT /locus_tag="DIP0880" FT /product="Putative RNA polymerase sigma factor (ECF FT family)" FT /note="Similar to Xanthomonas campestris probable RNA FT polymerase sigma factor RfaY SW:RFAY_XANCP (P46358) (217 FT aa) fasta scores: E(): 9.8e-07, 32.88% id in 149 aa" FT /protein_id="CAE49397.1" FT /translation="MARRNPHDPREHFRTCYVANYPKILAYVRRRSDTATSEDLTAEVF FT ARAWRHWETHTGDDLPWLYGIARNVLLEHYRARDHQTSIIKASAQQATDRAPDLTEAVD FT TRLSIHAALQRLNESDREILLLHAWEGLDPAEIAQVLDISANNARVKLHRARTHLDQIL FT SSSTTASVTTLSPRRG" FT misc_feature 854665..854823 FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily)" FT CDS 855138..856313 FT /transl_table=11 FT /locus_tag="DIP0881" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49398.1" FT /translation="MSSHHHHSSDRTLDALRAINPVADDTLSREETMRRDASLAAILDQ FT DTVTPLRRRRVSAPTQWAAIAASVALLAGGGLILPNVLDTNPAVATAEEVLTTTADRAG FT HKAQASDIAATTSDFLRRSDTDSTGKVTVAYEVRDGAVTHSVDTDGELSPELAQRAQTP FT EPKISPAQLNAATDMAAFIRDHAASIGEGSEAKTALHLLLVPGASPAAQKQLYAFLAQL FT PGNELAHTQQAQNNGDDEIVSVIRNNDQLSFDILPATGQLVRVVGLIPGVTTSIDTAGI FT VDCVRLNGTQGPEFLSLACGDNNHVISDLTWGKWGDEAAHAHGKAWLNACDPNCAQGQW FT KTYPVKVTATNKRTCGYNLEVYTKIDVEYDSDKQAPAEIPLKETYEPVCVS" FT CDS 856347..857252 FT /transl_table=11 FT /locus_tag="DIP0882" FT /product="Putative RNA polymerase sigma factor" FT /note="Similar to Mycobacterium tuberculosis CDC1551 RNA FT polymerase sigma factor, putative MT3329 TR:AAK47672 FT (EMBL:AE007144) (295 aa) fasta scores: E(): 1.4e-68, 61.42% FT id in 280 aa, and to Pseudomonas aeruginosa pao substrain FT OT684 pyoverdine gene transcriptional regulator PvdS FT TR:P72119 (EMBL:U12891) (237 aa) fasta scores: E(): FT 5.9e-56, 59.91% id in 237 aa" FT /protein_id="CAE49399.1" FT /translation="MSMSAQGKKAAESTTSTRPAKLDKQAYEAELKRLQAELVDMQQWV FT VETGARVVIIMEGRDAAGKGSAIKRMTQYLNPRTCRIEALPAPNSREQGQWYFQRYVEK FT LPTAGEIVIFDRSWYNRAGVERVMGFCTSQEYRRFLHQAPIFERLLVEDGIMLRKYWFS FT VSDEEQIARFKSRRNDPLRRWKLSPMDLQSITRWEDYSRAKDEMFVHTDIPSAPWYTVE FT SEDKKRSRINVISHLLSTIPYEKIDRPLPDIPERPAQDKDYKRPPRSDFRYVPDVAATF FT EKGAGSGKKKKTPKSKKNKK" FT CDS complement(857329..858042) FT /transl_table=11 FT /locus_tag="DIP0883" FT /product="Putative membrane protein" FT /note="Low similarity to Escherichia coli protein PnuC or FT B0751 SW:PNUC_ECOLI (P31215) (239 aa) fasta scores: E(): FT 5e-07, 23.75% id in 240 aa" FT /protein_id="CAE49400.1" FT /translation="MNILNQLLNATLYIGGIPILWREIIGNLFGLASAYGGMKRVVWAW FT PVGIIGNLLLFTVFLGGVFHTPQDLDLYGQAGRQIMFLVVSTYGWWKWSQARKTGLKEC FT QDLDPSRSIVSEPAEELSAVQPRWATRNERFGLIAFAIIGTLVFAWIFQTLGSWGPWAD FT AWIFTGSMLATYGMARGWTEFWLIWIGVDIVGVPLLLMAGYYPSAVLYMVYGAFVLWGF FT FVWLRIQHPRGETTR" FT misc_feature complement(order(857365..857418,857431..857487, FT 857509..857559,857572..857637,857854..857919, FT 857965..858021)) FT /note="6 probable transmembrane helices predicted for FT DIP0883 by TMHMM2.0" FT misc_feature complement(857998..858033) FT /note="ScanRegExp hit to PS00962, Ribosomal protein S2 FT signature 1." FT CDS complement(858062..858862) FT /transl_table=11 FT /locus_tag="DIP0884" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptococcus pyogenes hypothetical FT protein SPY0567 TR:Q9A0X9 (EMBL:AE006513) (265 aa) fasta FT scores: E(): 6.5e-20, 32.31% id in 263 aa" FT /protein_id="CAE49401.1" FT /translation="MTPRIIVTDMDGTLLNSEHEIPARFWPLLDEMHEQGIVFAPASGR FT QLYTLLDQFAQAGKDLSVIAENGTVVYHEGEIISVTTIDPEVAHRVIRTMAHSDLDWGV FT VVCRVDGAFIARGDVEFLTETVRYYAKLDVVDDLHSVVNDQVIKLAIYSFPDAETVAAP FT ALAESVGDHTLAISGAHWIDIMSPHANKGVALQQLADNLGVPIEHTAAFGDYLNDYELL FT HTAGTAYAMSNAHPDIKDIADHVVGSNDEESVLTTIHSLLTAAK" FT misc_feature complement(858158..858856) FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT misc_feature complement(858815..858850) FT /note="ScanRegExp hit to PS01228, Hypothetical cof family FT signature 1." FT CDS 858962..860014 FT /transl_table=11 FT /locus_tag="DIP0885" FT /product="Putative hydrolase" FT /note="Similar to Rhizobium loti FT 3-hydroxyisobutyryl-coenzyme A hydrolase MLR8392 TR:Q983C3 FT (EMBL:AP003014) (347 aa) fasta scores: E(): 3.8e-34, 36.47% FT id in 329 aa" FT /protein_id="CAE49402.1" FT /translation="MNNKTSAAPVRAYVENSTGVLELNRPQALNSLTHEMVNIIDQALD FT QWWDDDAVHRVLVYSNSPKAFCAGGDVRAAREAIQAGRGGEADQFFVDEYDMNNNISEF FT PKPYISLIDGFVMGGGLGLSAHGSHRVISEKASAAMPEMAIGFTPDVGMAYMFQRMTNA FT TGSTSHALAAFLVTTGWRMSAADMIWSGLATDIVPSADHDLFRETVYAESLDEALERYS FT VDTVGDSELATLLPHIEKTFGFPTWAQINEALDTYPDREFVNTVTELLSTANPESLVAA FT VELMVASARSTTLREELDHEVVLGEYIRSRPNFAEGVRAVLVDKDRNADFTPATTGEVD FT VTPMRKLLKN" FT misc_feature 859016..859555 FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family" FT CDS complement(860011..861270) FT /transl_table=11 FT /locus_tag="DIP0886" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49403.1" FT /translation="MLLPEPTTLRHVLIDGTIPQVATDEALIKDFGHPYEYAFNRTPQG FT YQVRWNTPKGVYILDAVVAAHIDPDDQWYWHQQFAFAIPELAEGPHHSSEELLTAARTL FT NGNGPAYLVPTEDGHTDVIVATPSFPQLPLAHALTLGLGQARNNNLTDDEIRRAIIAFA FT AQNDYSVAEDGLILCVRSDNGEQAHVDIARLKVRDLQSTTPQLRLTDVLADATFVAAEH FT QLLLNGRFPDARATTNDDCSVVTLTTPTGQTLRARALLIATLRGETLQWSWADPAVCDL FT PGAKAALGVKNFAIDNGLGMLLGQVDAATALSQRLYDAAKPVSRFWTDVRVPLSDGSTA FT IMLVDASELRLPPPSHAAVFATLHETVPHGRDIRRALSYYGAFRRITIDDVDYRRVRVH FT APSAPIQVSMDACGRVCSIV" FT misc_feature complement(860014..860025) FT /note="ScanRegExp hit to PS00294, Prenyl group binding site FT (CAAX box)." FT CDS complement(861306..861530) FT /transl_table=11 FT /locus_tag="DIP0887" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49404.1" FT /translation="MMNENRHHINELVAKIFPDLDPFTLRVQLAIASAVASTALKAYFE FT QHGVNNFTNPEAAKKLVTTAFGQLRTMDV" FT CDS complement(861538..861912) FT /transl_table=11 FT /locus_tag="DIP0888" FT /product="Putative tetR family transcriptional regulatory FT protein (partial)" FT /note="Similar to Streptomyces coelicolor putative FT tetR-family transcriptional regulator SCF56.06 TR:Q9RD60 FT (EMBL:AL133424) (213 aa) fasta scores: E(): 2.9e-07, 40.51% FT id in 116 aa" FT /protein_id="CAE49405.1" FT /translation="MTMASLRETKKIATKKALAHAAASLVVEAGLDAATVSAIAQRAGV FT SQRTFHNYFNSREEALVTFNFECITALVDDMTLLPDDWSLYRKTEAVVLRHLEKDEADP FT RVALFNFYAQRTPARPRDPN" FT misc_feature complement(861721..861861) FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT misc_feature complement(861727..861798) FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT misc_feature complement(861748..861813) FT /note="Predicted helix-turn-helix motif with score 1652 FT (+4.81 SD) at aa 34-55, sequence ATVSAIAQRAGVSQRTFHNYFN" FT misc_feature complement(861820..861861) FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT CDS complement(862009..862128) FT /transl_table=11 FT /locus_tag="DIP0889" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49406.1" FT /translation="MVIHIIILTLENRKIMGASIRELCHLSAIKQHDFRLSDL" FT CDS complement(862236..862532) FT /transl_table=11 FT /locus_tag="DIP0890" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49407.1" FT /translation="MIIGSRRARSDKYVKIAHLMQCTQPWFNHFLPEPESPQASTYKML FT KPVSWLPRPVKSVSFYPSRRTAVARNGHNLRLQWRGPLPELHWHSRSLQHTQH" FT stem_loop complement(862772..862825) FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT stem_loop complement(862832..862892) FT /note="Score 63: 21/21 (100%) matches, 0 gaps" FT CDS complement(862908..864338) FT /transl_table=11 FT /locus_tag="DIP0892" FT /product="Putative glyceraldehyde-3-phosphate FT dehydrogenase" FT /note="Similar to Streptomyces coelicolor putative FT glyceraldehyde-3-phosphate dehydrogenase SC4G1.06c FT TR:Q9FC43 (EMBL:AL391039) (481 aa) fasta scores: E(): FT 1.8e-99, 54.44% id in 472 aa and C-terminal region similar FT to Bacillus subtilis glyceraldehyde 3-phosphate FT dehydrogenase 1 GapA or Gap SW:G3P1_BACSU (P09124) (334 aa) FT fasta scores: E(): 6.7e-40, 41.39% id in 343 aa" FT /protein_id="CAE49408.1" FT /translation="MAQDWNDKIESAQKMLPLIAQLHNNNNVVVSVFGRLLINVTDIDI FT VKAHRYSRLATETELSPADTLPVLEALHSINVGPASIDLGRLVELHRSKGGDLTQFLTE FT ELSNVIDTRPAENPADVVLYGFGRIGRLLARILIAREAAYGGVRLRAVVVRKNGDQDLQ FT KRASLLRRDSVHGAFNGTITVDEENNIIWANGTKIQIIYSNDPATVDYTEYGINDAIVV FT DNTGRWRDREGLSQHLKSKGVKRVVLTAPGKGDLKNIVYGINHGDITDADSIVTAASCT FT TNGITPTLKVINDHYGIEYGHVETVHSFTNDQNLIDNFHKGARRGRAAGLNMVLTETGA FT AKAVSKALPELEGKLTGNAIRVPTPDVSMAVLNLTLEKEVTREEVNTLMDKVALHSDLR FT QQISYIQSPEVVSSDFVGTTHAGIVDGLATIANGKHLVLYVWYDNEFGYSNQVIRIVEH FT VAGARPTVLPERIASAEL" FT misc_feature complement(863013..863498) FT /note="HMMPfam hit to PF02800, Glyceraldehyde 3-phosphate FT dehydrogenase, C-terminal domain" FT misc_feature complement(863217..863270) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT misc_feature complement(863388..863438) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT misc_feature complement(863463..863519) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT misc_feature complement(863484..863507) FT /note="ScanRegExp hit to PS00071, Glyceraldehyde FT 3-phosphate dehydrogenase active site." FT misc_feature complement(863499..863987) FT /note="HMMPfam hit to PF00044, Glyceraldehyde 3-phosphate FT dehydrogenase, NAD binding domain" FT misc_feature complement(863586..863627) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT CDS 864602..865255 FT /transl_table=11 FT /locus_tag="DIP0893" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49409.1" FT /translation="MFYAARFALLDSVNVLLIGVIVAVAVMVSPPGKYRGIVGRLILGD FT WLGVFVTAIPTLALFHLVKENVEALLASPVLGVILILTGVFGVIMTLRGGDNSALVDKI FT LVPLKQPGIKTVTTGFMLGAIQSLTSVPFFTGLAYLSVSGFSPLVNYAALFLYASLALS FT LPTAVAVVMAVVRANPTSPVGKWFTAARANSQRVSTYAAYAVSIILVLIGVLHL" FT misc_feature order(864620..864679,864722..864790,864809..864877, FT 864959..865027,865064..865132,865190..865249) FT /note="6 probable transmembrane helices predicted for FT DIP0893 by TMHMM2.0" FT misc_feature 865258..865276 FT /note="Putative DtxR-regulated promoter/operator (IRP5: Lee FT et al., Infection and Immunity, (1997)65(10):4273-4280)" FT CDS 865283..865486 FT /transl_table=11 FT /locus_tag="DIP0894" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Arabidopsis thaliana AT2G37870 FT protein or T8P21.22 TR:Q9SHA0 (EMBL:AC007661) (115 aa) FT fasta scores: E(): 6.8, 31.66% id in 60 aa" FT /protein_id="CAE49410.1" FT /translation="MGSKNAKKKSTVKVTHNPLGLKIKSTCCRSNPRCINCPVVYQRLE FT KSGAWARDDMNLPRELKLARRW" FT CDS complement(865500..867134) FT /transl_table=11 FT /locus_tag="DIP0895" FT /product="Putative peptide chain release factor 3" FT /note="Similar to Caulobacter crescentus peptide chain FT release factor 3 CC1070 TR:Q9A9B9 (EMBL:AE005784) (534 aa) FT fasta scores: E(): 2.4e-70, 40% id in 545 aa, and to FT Staphylococcus aureus peptide chain release factor 3 PrfC FT or Rf3 SW:RF3_STAAU (O86490) (521 aa) fasta scores: E(): FT 2e-38, 38.57% id in 547 aa, and to Escherichia coli peptide FT chain release factor 3 PrfC or Tos or MiaD or B4375 or FT Z5976 or ECS5333 SW:RF3_ECOLI (P33998) (528 aa) fasta FT scores: E(): 1.6e-24, 41.94% id in 534 aa" FT /protein_id="CAE49411.1" FT /translation="MSSVAQEAHRRRTFAVIAHPDAGKSTLTEALALHAHVISEAGAVH FT GKGNRKATVSDWMEMEKDRGISIASSALQFEYAPEGHSGEPFMINLVDTPGHADFSEDT FT YRVLTAVDAAVMLIDAAKGLEPQTLKLFRVCKARGLPIITVINKWDRPGRTPLELVDEI FT VTEIDLQPTPLFWPVGDAGDFRGLARINPDGEAEEYIRFLRTAGGSTIAPEEHYTPEEA FT SSREETAWDTAAEEVELLAADGAVHNQELFLECTTSPLIFASAMLNFGVHQILDTLCEL FT APQPHGRESDERAVEAATGAFDSSREVTDEFSGVVFKVQAGMDKNHRDSLAFMRVVSGE FT FDRGMQVTHAQSGRSFSTKYALTVFGRTRSTVESAFPGDIVGLVNAGSLAPGDTIFAGR FT KVQYPPMPQFAPEHFRTLRAKSLGKYKQFRKALDQLAAEGVVQILKNDARGDAAPVMAA FT VGPMQFEVMMARMQNEYNVETVADPIPYSVARRTTPETATELAKQRGVEIFTRTDGELV FT ALFGDKWKLAFIEKEHPEFELLPMVAD" FT misc_feature complement(865947..866195) FT /note="HMMPfam hit to PF03144," FT misc_feature complement(866277..867110) FT /note="HMMPfam hit to PF00009, Elongation factor Tu family" FT misc_feature complement(866682..866711) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(866784..866819) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(866835..866867) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(866922..866948) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(866922..866969) FT /note="ScanRegExp hit to PS00301, GTP-binding elongation FT factors signature." FT misc_feature complement(867057..867098) FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature complement(867060..867083) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(867146..867955) FT /transl_table=11 FT /locus_tag="DIP0896" FT /product="Putative oxydoreductase" FT /note="Similar to Streptomyces peucetius daunorubicin C-13 FT ketoreductase DnrU TR:Q9ZAU1 (EMBL:U77891) (287 aa) fasta FT scores: E(): 1.3e-16, 35.25% id in 278 aa" FT /protein_id="CAE49412.1" FT /translation="MMSERTFVVTGASDGIGAAAIRRLRRQFPSDRVVIVGRNLVKTQA FT VARECGVRFHVADFEDLSQVRRLAAELGDLSRIDGLANNAGGLFDGPVITRDGWERTWQ FT VNVVAPFLLTSLLRPQLAAATVVQTASIANALMSWFRPDDPDSSRGFSSERAYGNAKLG FT DILMTRYFHAHGLRSVAFHPGVLATGFAQGTSGVLGRLYSGAIGKRFDSPDAGGRLLVR FT FLTEEVESGMYYNNKLSAGWQRPIARNPKVASRVFDDLSSQLGVSWG" FT misc_feature complement(867206..867949) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase" FT misc_feature complement(867383..867436) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(867440..867526) FT /note="ScanRegExp hit to PS00061, Short-chain FT dehydrogenases/reductases family signature." FT misc_feature complement(867695..867730) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT misc_feature complement(867887..867940) FT /note="FPrintScan hit to PR00081, Glucose/ribitol FT dehydrogenase family signature" FT CDS complement(867987..868529) FT /transl_table=11 FT /locus_tag="DIP0897" FT /product="Putative peptidyl tRNA hydrolase" FT /note="Similar to Mycobacterium tuberculosis peptidyl-tRNA FT hydrolase Pth or Rv1014c or MT1042 or MTCY10G2.35 FT SW:PTH_MYCTU (P96386) (191 aa) fasta scores: E(): 9.5e-26, FT 42.62% id in 183 aa, and to Escherichia coli peptidyl-tRNA FT hydrolase Pth or B1204 or Z1975 or ECS1709 SW:PTH_ECOLI FT (P23932) (194 aa) fasta scores: E(): 6.7e-19, 38.04% id in FT 184 aa. Possible duplication of this CDS downstream in FT DIP0900 (40.719% identity in 167 aa overlap)" FT /protein_id="CAE49413.1" FT /translation="MGLGNPGVRYASTRHNVGYMVVDELLGPAELRPLRGFKASGAVIE FT VGGCRVLVVRSSTFMNTSGEAVGPIVQEYGVSPDHVVVVHDELDLPAHKVRVKVGGNEN FT GHNGLKSVSQWLGTRDYVRIRVGIGRPPRGGTVPDYVLGALDSGEVLDAAVRCGADAIR FT LVIERGVSVAQNEIHRR" FT misc_feature complement(867996..868529) FT /note="BlastProDom hit to PD005324, PD005324" FT /note="HMMPfam hit to PF01195, Peptidyl-tRNA hydrolase" FT misc_feature complement(868461..868502) FT /note="ScanRegExp hit to PS01195, Peptidyl-tRNA hydrolase FT signature 1." FT CDS 868809..869369 FT /transl_table=11 FT /locus_tag="DIP0898" FT /product="Hypothetical protein (putative DNA binding FT protein)" FT /note="No significant database matches" FT /protein_id="CAE49414.1" FT /translation="MSITAQLAALAGHGIELAKEIFAHGTSLKSKEDLAAVLGFDPTRV FT GRYQKTAKALFGPTDQPQLRAQAIAIAQKNNFSIDVLALINCKVGRLADAPLREEFRLE FT LHRFAVDNSYTAIKQFANDQLEKRNGPNPARQHSLRYARFSHHPDANGMRYLITSLPDE FT TMTAIEAKLVDKAKAHKSDTISM" FT misc_feature 868893..868958 FT /note="Predicted helix-turn-helix motif with score 1056 FT (+2.78 SD) at aa 29-50, sequence KSKEDLAAVLGFDPTRVGRYQK" FT CDS 869457..869972 FT /transl_table=11 FT /locus_tag="DIP0899" FT /product="Conserved hypothetical protein" FT /note="Low similarity to parts of Mycobacterium FT tuberculosis CDC1551 conserved hypothetical protein MT0103 FT TR:AAK44326 (EMBL:AE006921) (287 aa) fasta scores: E(): FT 5.6e-09, 39.04% id in 105 aa" FT /protein_id="CAE49415.1" FT /translation="MIPADGWRHVGDQWLVSTDGAKIHASELADHLLADFGYAIVYDEM FT AEPVDLYRTQRFANDKQRLILTADQLLCADPQCTRAAYRGQAHHIEAWKNGGDTNLKNL FT CLTCGPHNALNDDDHAKGKHKNGHYVRDKYNGRIGWQPPDPTKSIRFNNHVLAQKSGRS FT WAIRHFGL" FT CDS complement(870146..870700) FT /transl_table=11 FT /locus_tag="DIP0900" FT /product="Putative peptidyl tRNA hydrolase" FT /note="Similar to Mycobacterium tuberculosis peptidyl-tRNA FT hydrolase Pth or Rv1014c or MT1042 or MTCY10G2.35 FT SW:PTH_MYCTU (P96386) (191 aa) fasta scores: E(): 8.8e-31, FT 47.7% id in 174 aa, and to Escherichia coli, and FT peptidyl-tRNA hydrolase Pth or B1204 or Z1975 or ECS1709 FT SW:PTH_ECOLI (P23932) (194 aa) fasta scores: E(): 7.3e-16, FT 39.2% id in 176 aa. Possible duplication of this CDS FT upstream in DIP0897 (40.719% identity in 167 aa overlap)" FT /protein_id="CAE49416.1" FT /translation="MTSPYLIVGLGNLGPEYTKTRHNIGYMAIDELLTRTSPMPATLTV FT HKKTNTLVAETRLGTQKVIVAKPRAFMNVTGPSVRKLADFFTVDRNRIVVLYDDLDLEF FT GAIKFRHGGGDHGHNGLKSITQALGTKDYIRGGIGIGRPPGRMAPKSFVLKPFSKIEQS FT ELPIVCADAADEVEKITTSEL" FT misc_feature complement(870155..870694) FT /note="HMMPfam hit to PF01195, Peptidyl-tRNA hydrolase" FT misc_feature complement(870170..870685) FT /note="BlastProDom hit to PD005324, PD005324" FT misc_feature complement(870329..870361) FT /note="ScanRegExp hit to PS01196, Peptidyl-tRNA hydrolase FT signature 2." FT misc_feature complement(870611..870652) FT /note="ScanRegExp hit to PS01195, Peptidyl-tRNA hydrolase FT signature 1." FT CDS complement(870759..871376) FT /transl_table=11 FT /locus_tag="DIP0901" FT /product="Putative 50S ribosomal protein L25" FT /note="Similar to Mycobacterium tuberculosis probable 50S FT ribosomal protein L25 RplY or Rv1015c or MT1043 or FT MTCY10G2.34 SW:RL25_MYCTU (P96385) (215 aa) fasta scores: FT E(): 1.1e-22, 41.53% id in 195 aa, and to Bacillus subtilis FT general stress protein Ctc SW:CTC_BACSU (P14194) (203 aa) FT fasta scores: E(): 1.2e-15, 33.82% id in 204 aa" FT /protein_id="CAE49417.1" FT /translation="MADYTTIAAQPRNEFGKGFARRLRVAGQVPGVIYGVDVEAPIHFS FT INRLELHAVLRAHGVNAIIELDIEGEKHLTMIKHVDQNVLTLNADHVDLLAIKRGEKVE FT VEVPVVLTGETAPGTTLVQDADVVLVEADVLSIPEEITFSVEGLDVDSKVLAGDLAMPA FT NTSLVADAETVIASVNHEEVAEEAEETEGEDAEEAPAAEGEE" FT misc_feature complement(871095..871358) FT /note="HMMPfam hit to PF01386, Ribosomal L25p family" FT misc_feature complement(871098..871361) FT /note="BlastProDom hit to PD012503, PD012503" FT CDS complement(871597..873411) FT /transl_table=11 FT /locus_tag="DIP0902" FT /product="Putative hydrolase" FT /note="Similar to the C-terminal regions of Thermotoga FT maritima pullulanase precursor PulA or TM1845 SW:PULA_THEMA FT (O33840) (843 aa) fasta scores: E(): 3.3e-67, 36.72% id in FT 610 aa, and of Klebsiella pneumoniae pullulanase precursor FT PulA SW:PULA_KLEPN (P07206) (1090 aa) fasta scores: E(): FT 1.2e-20, 28.94% id in 615 aa" FT /protein_id="CAE49418.1" FT /translation="MTTTNSYTGQLGAFLTPHGDTCFRVWSPDAATADLLIENHTVSMH FT PIGDGVWEAKLDGDRHGQRYSYRLSLRGETIESVDPYARAVTANGTHGVVVTQSTPVPR FT MPAFTAPTDAIIYEAHVRDLSIAPNSGIHNKGRFLGLTERDTHTTAGNPSGLDYILSLG FT VTHIQLLPIFDFGSVDETGDLSYNAQYNWGYDPMNYNAPEGSYSSNPNDPFTRIDELKH FT TIRTLHDAGLRVIMDVVYNHVYDTTTSPLERTAPGHYFRMTDDGTFHDGTFCGNETASE FT NPMMRKFIIDSVTHWATEYGLDGFRFDLMGIHDVDTMNAIRTALDAIDPSIIILGEGWN FT LGNHPPHILPANQHNAAHMPRIAHFNDSLRDTLKGSTFHSNSRGLLTGDHNPKHMWTLF FT NNIKGAQHLPGLNFTSANHTVNYIEAHDNHTLYDRLHLLLPDAPHDELIRRCQLATTIQ FT YLACGITFIHAGQEFARTKNNTENSYNSPDHINAIDYDRAAQHPHSVQLLRDLNNFRKT FT HTELFPTEYDDINELYEATLVSGDFLTYSVGKQTTVAINFSTQPRSIPTEGYFAVLLDD FT HVFPTDKQIETNSWTVAPLSVSILQQVS" FT misc_feature complement(871867..872976) FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT misc_feature complement(873142..873390) FT /note="HMMPfam hit to PF02922, Isoamylase N-terminal FT domain" FT CDS complement(873535..874515) FT /transl_table=11 FT /gene="prsA" FT /locus_tag="DIP0903" FT /product="ribose-phosphate pyrophosphokinase" FT /note="Similar to Mycobacterium tuberculosis PrsA or FT Rv1017c or MTCY10G2.32 TR:P96383 (EMBL:Z92539) (326 aa) FT fasta scores: E(): 6e-89, 72.61% id in 325 aa, and to FT Bacillus caldolyticus ribose-phosphate pyrophosphokinase FT Prs SW:KPRS_BACCL (P42816) (315 aa) fasta scores: E(): FT 4.6e-50, 47.46% id in 316 aa, and to Escherichia coli FT ribose-phosphate pyrophosphokinase PrsA or Prs or B1207 or FT Z1978 or ECS1712 SW:KPRS_ECOLI (P08330) (314 aa) fasta FT scores: E(): 1.6e-43, 42.54% id in 315 aa" FT /protein_id="CAE49419.1" FT /translation="MTSHNWTANQKNLMVLTGRAHPELADAVAKELGVEITPTTARDFA FT NGEIFVRFEESVRGCDAFVLQSHTQPLNKWLMEQLIMIDALKRGSAKRITAILPFYPYA FT RQDKKHRGREPISARLVADLLRTAGADRIVSVDLHTDQIQGFFDGPVDHMHAMPILTDY FT IKGKYDLDNVVVVSPDAGRVKVAEKWANTLGDAPMAFVHKTRSVDVANQVVANRVVGDV FT AGKTAILLDDMIDTGGTIAGAVGVLRDAGAEDVIIACTHGVFSGPARERLSQCGAKEVI FT TTDTLPQSTEGWDNLTVLSIAPLLAKTIHEIFENGSVTTLFEGQA" FT misc_feature complement(873664..874086) FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain" FT misc_feature complement(873793..873819) FT /note="ScanRegExp hit to PS00144, Asparaginase / FT glutaminase active site signature 1." FT misc_feature complement(873799..873837) FT /note="ScanRegExp hit to PS00103, Purine/pyrimidine FT phosphoribosyl transferases signature." FT CDS complement(874524..875978) FT /transl_table=11 FT /locus_tag="DIP0904" FT /product="Putative UDP-N-acetylglucosamine FT pyrophosphorylase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT UDP-N-acetylglucosamine pyrophosphorylase MT1046 FT TR:AAK45297 (EMBL:AE006987) (513 aa) fasta scores: E(): FT 8.6e-104, 59.07% id in 474 aa, and to Bacillus subtilis FT UDP-N-acetylglucosamine pyrophosphorylase GcaD or Tms or FT Tms-26 SW:GCAD_BACSU (P14192) (456 aa) fasta scores: E(): FT 1.2e-62, 40.48% id in 452 aa" FT /protein_id="CAE49420.1" FT /translation="MSNPHSSAVIVLAAGAGTRMKSAKQKTLHSIGGRSLLAHSLHAAA FT GLSPQRIVAVIGHRREQVRPEVEAVAATVDCEISVAIQEQQNGTGHAVQCAMHELEGFE FT GTVVVTNGDVPLLRSETLRSLVDAHTAVPTAVTVLTMSLSDPTGYGRIVRNDEGEVTAI FT VEQKDGDEETLKITEVNSGVFAFDAAILRSSLGKLDSNNAQGELYLTDVLSIARTEGHP FT VRAYRAHDHRELAGVNDRVQLAQAGKILNQRLVEDAMRNGATIVDPDTTWIDSEVTIGR FT DVIIHPSTQLLGKTSIADNCVIGPDTTLTNMVIDEDAHVIRTHGFDSRIGAHANIGPFT FT YIRPGTVVGENGKLGGFVEAKNAQIGRGSKVPHLTYIGDATVGEESNIGASSVFVNYDG FT VNKHHTTIGSHVRTGSDTMFIAPVTVGDGAYSGAGTVIKEDVPAGALVVSGGKQRNIEG FT WVEKNRPGTPAADAARQAHAHETKEG" FT misc_feature complement(874698..874751) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(874842..874895) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(874947..875000) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(875046..875099) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(875100..875153) FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (four repeats)" FT misc_feature complement(875247..875957) FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase" FT CDS complement(876064..876960) FT /transl_table=11 FT /locus_tag="DIP0905" FT /product="Putative LysR family transcriptional regulator" FT /note="Similar to Pseudomonas aeruginosa probable FT transcriptional regulator PA3398 TR:Q9HYK6 (EMBL:AE004761) FT (308 aa) fasta scores: E(): 4e-18, 30.94% id in 265 aa" FT /protein_id="CAE49421.1" FT /translation="MANVKTLVEPAALALLIAVDEYGSVSAAADIVGTSQANASRSLSR FT AEHRLGAQLLNRGSQGTTLTAAGQIVVQHARTIIRGYHDLEAAFRNLGDSPVGLRIAAS FT NTIADHLLPHWLHVWDGSVLALTTTNSSEVVAGLHRRQWDLGFIETPEFSAGIHHSVVA FT HDELIVVCTPDHPMAQLDHVTITDLSTTALITREKGSGTRICLERALGQPPLIKLEVSS FT NAAVRSAVLSGSAPAVLSHTVVKDDLAAGSLKRIPTEGIDLTRPLTAVWSGPRALPPAA FT AQLVAVARELSCTESSL" FT misc_feature complement(876520..876933) FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family" FT misc_feature complement(876829..876894) FT /note="Predicted helix-turn-helix motif with score 1122 FT (+3.01 SD) at aa 23-44, sequence GSVSAAADIVGTSQANASRSLS" FT CDS 877048..878124 FT /transl_table=11 FT /locus_tag="DIP0906" FT /product="Putative membrane protein" FT /note="Low similarity to Streptomyces coelicolor putative FT integral membrane protein SCI35.39 TR:O88074 FT (EMBL:AL031541) (394 aa) fasta scores: E(): 1.8e-16, 29.34% FT id in 351 aa" FT /protein_id="CAE49422.1" FT /translation="MNNNPLDSSSQPQHLPLPGSGPVWFPSVMGTGILANLLQIHAERL FT PGAHDLALAILIVAWALLLFLSVGFIVRVMRDPQVFTASVRAMAALPFWSTVSMGYLSV FT GSASTVVIPSYLPQWHDSIWVVNTWMWVFGTVVGVSTALVFAFRLIGVDRGDPTTVWGL FT AVVGPMVSSTTGANLAAHVPHGVVLWLQVASAACFFLSFYAGAVIFSCAYHHFWRVATI FT PVAASASAWIPLGMVGQSAAAAQAMALQAEHVLVQGFGQSVHQIAHTYGWIMVVVGIPM FT VAWACAVTLRGFRKRMPFSPGWWALTFPIGTLALGATLLGAGTQIQPLVWLGAVGTLCL FT VGTVTLCLVASARAVLRG" FT misc_feature order(877198..877266,877324..877392,877420..877488, FT 877525..877593,877606..877674,877693..877761, FT 877843..877911,877948..878016,878029..878097) FT /note="9 probable transmembrane helices predicted for FT DIP0906 by TMHMM2.0" FT CDS 878149..879078 FT /transl_table=11 FT /locus_tag="DIP0907" FT /product="Putative reductase" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 33.0 kDa protein in proB-proA intergenic region FT SW:YPRA_CORGL (P45637) (304 aa) fasta scores: E(): 7.5e-48, FT 45.3% id in 309 aa, and to Escherichia coli 2-ketogluconate FT reductase TkrA or B3553 SW:TKRA_ECOLI (P37666) (324 aa) FT fasta scores: E(): 1.4e-13, 31.57% id in 247 aa" FT /protein_id="CAE49423.1" FT /translation="MKYFMGPHVWQRTIADLEALGHQRVDTFEQAEAYINTEPRPLRIP FT TIPESVGFVQHCFTGVNQLIDAHVITETGVRWANMAGGFAQPVAESALGLMLSQAHHHK FT AFALAGTWRVARELDRIQQWLHSVGEPRCVVIFGAGGIAKELIRLLEPFGMHVIAVNRS FT GRSVAGADETFAMKDAQGLWSRGDFIVNILPLTQETKGLVDRDVFAQMKPSAIFINVGR FT GATVVTDDLVDALQRGVIAGAGLEVVDPEPLPDSHALHSMPNCTITPHMAASDHVAELH FT VARIFDANAQAFTRGETMPTEVNPHLGY" FT misc_feature 878398..878958 FT /note="HMMPfam hit to PF02826, D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD binding domain" FT CDS 879104..880714 FT /transl_table=11 FT /locus_tag="DIP0908" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Corynebacterium striatum ABC transporter FT TetA TR:Q9Z4Q1 (EMBL:U21300) (513 aa) fasta scores: E(): FT 1.3e-45, 33.98% id in 509 aa" FT /protein_id="CAE49424.1" FT /translation="MQWRLFTRPNQVPPRMVTWSWLAPATPSVSRDSLPPRGWGSGPRA FT AWSILWMYPWVSIYTVVVMIASSMASVGVSAVIGRAVDGTLGSGTLADALAPMAGVAAF FT LLMVYLCQSTADAVTEIAIQRGVHHVRFALVRRLSTSHPSDLTPGQLLNTVDEDVQQLV FT SVKQNFSFPVAMFAYLLGTVVAIAQFSLPLGAAVLGGGVATAAVSYFTGKAITKVSGQR FT RNMESESVSLATDLAQGARVVRGLGAVDASEQRFDAATAAALAVMLQDAKVSSITTLIR FT QMIPMIFTLAVLSYGGWLTMHGDISSGQFLTVTLLAVPALSITGYSLGFLTDFWARAVA FT SGRRINKLSEQLAQPRHGEAQRSIHVDSGLTVWAPTTPRARETVHELTEYLVQHRGAIA FT APHAVSVFQGTLTDNIDPLQQLSSEEIEQVIEASCSTDVVKRLGGVPHGGVPSALIGES FT GLNLSGGQRQRVALARVLGMNPEILILDEPTTGLDAVTLDRVTAHVKEFRQGKTTIVIT FT TSRAWAAVADTVIDDKELA" FT misc_feature 879269..880075 FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature order(879272..879340,879368..879436,879608..879676, FT 879686..879739,879932..880000,880028..880096) FT /note="6 probable transmembrane helices predicted for FT DIP0908 by TMHMM2.0" FT misc_feature 880205..880708 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 880487..880531 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 880487..880654 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 880715..882502 FT /transl_table=11 FT /locus_tag="DIP0909" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to C-terminal region of Mycobacterium FT smegmatis ExiT TR:O85018 (EMBL:AF034152) (1122 aa) fasta FT scores: E(): 5.9e-45, 34.56% id in 596 aa, and to FT Streptomyces coelicolor putative ABC-transporter FT transmembrane protein SCF34.12c TR:Q9RK13 (EMBL:AL109974) FT (601 aa) fasta scores: E(): 1.5e-42, 33.98% id in 612 aa" FT /protein_id="CAE49425.1" FT /translation="MATGTESALLQPASIREIGAFLATLPSRPRLTWWALLIGNFAVAL FT TAMVVTSSAIGALVDIINGIERFPFGTGQRAFWLMIAVIATGLFLDTVGRAYGQYIVSS FT RARLLSVDVRRSCLVSALRAPIPDIVALGTGNVITRLTKDIDEAVRIANMIGVRLIITC FT LMFPFTFVALGLIHWGFVVAFIVVMLAIYPFAKANLALLPTATNSFSDAEAQRNNLLLD FT TIKGLPTLRALGLRDWATRRLEHTSWQTVIKAADRMPLVTRLLRHGTIAYTSIVVVCFC FT IATWLTHNGHITFGQATAAITLVSRMEMHVFNVMFFSGDIQNALTSLGRAVRLATLNQQ FT HTKPTPADLRTPPTVSVRDLTFAYPSGATVFNSINLTLAAGTTTALVGASGAGKSTLAG FT IIAGLQRPSSGHVYIGDHATDTIDDAWTSRHVALISQEVHIFAGTLRDDLSMAKPEASD FT AEILDALAEVGLHPQSAMWQRWLPHGLDTMVGAGAAELAPEIQQQISLARIILLQPPVL FT IMDEATAEAGSENARQLEAAATAVARGRTSLIVAHRLDQAQLADRIIVMDNGEIVEDGT FT HDFLLEAGGRYAELFKKWQ" FT misc_feature 880811..881647 FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature order(880814..880882,880940..881008,881174..881242, FT 881252..881320,881504..881572) FT /note="5 probable transmembrane helices predicted for FT DIP0909 by TMHMM2.0" FT misc_feature 881852..882424 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 881855..882421 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 881861..881938 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 881876..881899 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 882179..882412 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT tRNA 882605..882676 FT /gene="tRNA-Gln" FT /product="transfer RNA-Gln" FT /anticodon=(pos:882638..882640,aa:Gln) FT /note="tRNA Gln anticodon TTG, Cove score 52.03" FT CDS 882775..883422 FT /transl_table=11 FT /locus_tag="DIP0910" FT /product="Putative tetR family transcriptional regulator" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT transcriptional regulator, tetR family MT1047 TR:AAK45298 FT (EMBL:AE006987) (202 aa) fasta scores: E(): 4.4e-45, 63.9% FT id in 205 aa" FT /protein_id="CAE49426.1" FT /translation="MVRQRMSGIQRREQLIAIGREVFAERGFDGASMEEIAARAGVSKP FT VVYEHFGGKEGLYAVIVDREMVKLQSVITGSMQTGRSRARIEQAVVALLTYVEEETDAF FT QILVRDMKAGQDHSYSTLLNDAVEQVSHILGQAFERSGLNPKNATLYAQALVGMVSMTA FT QWWLDRRKEPNAATKEQVAAHIVNLCWNGLAGMEANPQLSNIDSPPETLGAH" FT misc_feature 882817..882858 FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT misc_feature 882817..882957 FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT misc_feature 882865..882930 FT /note="Predicted helix-turn-helix motif with score 1437 FT (+4.08 SD) at aa 31-52, sequence ASMEEIAARAGVSKPVVYEHFG" FT misc_feature 882880..882951 FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT CDS 883472..887266 FT /transl_table=11 FT /gene="mfd" FT /locus_tag="DIP0911" FT /product="transcription-repair coupling factor" FT /note="Similar to Mycobacterium tuberculosis FT transcription-repair coupling factor Mfd or Rv1020 or FT MT1048 or MTCY10G2.29c SW:MFD_MYCTU (P96380) (1234 aa) FT fasta scores: E(): 2e-200, 57.37% id in 1234 aa, and to FT Escherichia coli transcription-repair coupling factor Mfd FT or B1114 SW:MFD_ECOLI (P30958) (1148 aa) fasta scores: E(): FT 7e-103, 36.52% id in 1191 aa" FT /protein_id="CAE49427.1" FT /translation="MPDKSVPAAQPPMLAGLLKVAATDPKIKGLLQHVGEPHLHITGID FT QARPWAIAALAHRAPVLVVTATGREAEDLSAELRAMLGEKVAWFPAWETLPHERLSPGA FT DIAGQRARILSHIADYSVVVTAARGFSQPIVSQVAGRDPLVLEVDSECSLEEATQQLVF FT RAYHHVDLVAKRGEFATRGGILDVFPTTAQHPVRVEFWGDEVSEIRGFQVADQRAIPDS FT DVSRVEVFPARELPITPEIAQRAAELAVKFQGNPTLQELLAKISDSIPSDGMEALIPAL FT VDQPMVTLAELMPENTHIVVVGPEKIRTRVADLQATDAEFLAAGWEAAAMGADGPVATR FT GLDLDASSYRSYESLENTAQKHTMPWWTFAPPGMFEASDGDTLPLEFEPGPTPRGDLEQ FT IDQMMALLLAHTRDGGAAAFIAPAQGAIKRMVERFKEQGIPTKVATPGWQPTLGEVTLY FT QAMSHAGLVFPKVRKQPGKPALPLVVITKTDLTGNRVGDIAGAKRRPAKRRHRVDPLAL FT KTGDYVVHETHGIGRFLKMTERVIQSGDETSRREYIVLEYAASKRGQPADQLYVPMDSL FT DMLSKYVGGEKPTLSKMGGSDWKNTKKKARAAVREIAGELVELYAKRQSAPGHAFAPDS FT PWQHEMEDNFPYVETEDQMLAIDAVKADMEKPSPMDRVVVGDVGYGKTEVAVRAAFKAV FT QDGRQVVVLVPTTLLAQQHLSTFEERMAGFPVTIKGLSRFTSPSESKEILKGLADGSVD FT IVIGTHRLLQTGVQWKNLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLE FT MSMAGIREMSTILTPPEDRHPILTYVGAQEDKQVAAAIRRELLRDGQVFYVHNKVSDIE FT KKARELRELVPEARIVVAHGQMSEELLEQTVQGFWDREYDVLVCTTIVETGLDIANANT FT LIVENAHHMGLSQLHQLRGRVGRSRERGYAYFLYPKGATLTENSYDRLATIAQNNDLGA FT GMAVAMKDLEMRGAGNVLGAQQSGHIAGVGFDLYVRLVGEAVEAYRALADGKVADATEQ FT GPKEIRIDLPVDAHIPEDYINSERLRLEVYRKLAASANDKDLALVVEEMKDRFGPVPHE FT VKRLLAVSRLRHLARATGLSDIGVQGTRIKLHPVELTDSKQVRLKRLAPSATYRAAAKA FT IQLPFPKEGAKVTDKQLRDVELLQWVADFIAEMFEHDRVSVTGEKLPDKVISVAQPMSP FT AAARAERVAQRAAVRRQARNDDEDYEDRREARRRKYRMR" FT misc_feature 885386..885976 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 885404..885982 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 885497..885520 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 885569..886357 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 886082..886336 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT CDS 887323..887748 FT /transl_table=11 FT /locus_tag="DIP0912" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49428.1" FT /translation="MDTYITRESLQAILNKLDIDSAIDDDGLVGAGFPSGETVFIIDDT FT LVTARTNWYGIIPDHKQQEIEEFINSTNARVPVGKLIPVVMGDGTKTLEFRLHLHQSHP FT LSDTQLCQILDAYFQLAFHCFDAALMVTTGADLEQEQ" FT CDS 887751..888233 FT /transl_table=11 FT /locus_tag="DIP0913" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49429.1" FT /translation="MAWFFNKKERPTAGPQLYPVTCEAVVSAIRAKGGDVHIDDAGFAT FT TDVDGISVIIADSDNCVMLSVLTTADARIDDSPCDADRWVTAFNVNCIGPVMFTTTQPI FT DGHNATIVHADYRILGSPFALTEEQLTAEVVFGVNAVTEAIRGYIEGFDVGQSPWD" FT CDS complement(888244..889740) FT /transl_table=11 FT /gene="lysI" FT /locus_tag="DIP0914" FT /product="L-Lysine transport protein" FT /note="Similar to Corynebacterium glutamicum L-Lysine FT transport protein LysI SW:LYSI_CORGL (P35865) (501 aa) FT fasta scores: E(): 9.3e-131, 69.85% id in 491 aa" FT /protein_id="CAE49430.1" FT /translation="MTTPATIVEATSAKSHSVRIWTLIGLIIGSTVGSGIFSLPQNIAS FT VAAPGAMFIGWLIAGIGMLAVAFVFQILAHRKPHLDSGVYSYVRAGLGDYIGFTSGWGY FT WLGSVIAQVGYATLFFSTLGHYVPLFNSDNRVASVIGVSLLTWVIFGILSMGVKQAAFM FT NAITTVAKLLPIFAFIILVAFLGFSWDKLTLDFWGESTGSSVFEQIQGIMLFTVWVFIG FT VEGASVYSKQARTRRDVGRATVIGFFTVLVLLVSVSTLSYGVLTQAELAALPDNSMANV FT LEAVIGTWGAALVSIGLCLSVLGAYVSWQMLCAEPVAMMAFDGLLPRKLGTINATGSPV FT IAQLISTIVIQLWVFVFFLNETTYISMVQLATVLYLLPYVFSSLYLILLATRGKGISHP FT AAGTRFDDSGPDVSAADNRRHLFVGAVAFVYSLWLFYAADLKYVLFGALAVLPGLIPYV FT WTRLYTKERVFNAFEWFVVALIIIAAGYGLSGIMTGSMSL" FT misc_feature complement(order(888259..888324,888364..888414, FT 888427..888477,888574..888639,888670..888735, FT 888820..888885,888946..889011,889051..889116, FT 889177..889233,889270..889335,889381..889446, FT 889519..889584,889630..889680)) FT /note="13 probable transmembrane helices predicted for FT DIP0914 by TMHMM2.0" FT misc_feature complement(888346..889671) FT /note="HMMPfam hit to PF00324, Amino acid permease" FT misc_feature complement(888580..889704) FT /note="ProfileScan hit to PS50285, Permeases for amino FT acids and related compounds, family I." FT CDS 889839..890537 FT /transl_table=11 FT /locus_tag="DIP0915" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 35.4 kDa protein Rv1021 or MTCY10G2.28c TR:P96379 FT (EMBL:Z92539) (325 aa) fasta scores: E(): 3.2e-20, 38.61% FT id in 202 aa" FT /protein_id="CAE49431.1" FT /translation="MPQNQYRHEHPAPERVPAIKASMITMSVMTVLLLDARWPSMIPFN FT LVGKLEGQLRFTDEVPVKVRWNLDDIVRFATDDLLVSTNELDPQVIAAINNGASVIEVP FT SRHDALGQAREVMRRAVARGEWEQTQTHESLLEYLDEETEEFAQAVAHGTTDHIVSELG FT DVLLQVLFHAEIGARHGEFNLDDVAASFVTKMQQRSPYLFDGSDGVVPIEEQERLWEAG FT KHRSAHAQTN" FT CDS 890549..891325 FT /transl_table=11 FT /locus_tag="DIP0916" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 25.8 kDa protein LpqU or Rv1022 or MTCY10G2.27c TR:P96378 FT (EMBL:Z92539) (243 aa) fasta scores: E(): 7.2e-34, 46.02% FT id in 239 aa" FT /protein_id="CAE49432.1" FT /translation="MRKAAGCALGVVLAVIMVIAIVGWTLSIMSGVSPIRQLEDVPTDV FT PPARAEAVPQIDINAPGRTSDKLAFWADPIAEETSISSAAIRAYGNAELVAAQSWPECH FT LSWGTLAGLGFVETRHGTYSGHLFDSRSIDADGNVLPPIIGVPLDGSPGFAEVKDTDSG FT ELDGDPQFDRAVGPMQFIPESWKRYGRDANGDGVADPNNIDDAALAAANLLCDGRDLAT FT ADGWTNAIYSYNMSNDYLVKVRNAAASYALRQPAVQ" FT misc_feature 890549..890698 FT /note="Signal peptide predicted for DIP0916 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.365 between residues 50 and 51" FT CDS 891487..892764 FT /transl_table=11 FT /gene="eno" FT /locus_tag="DIP0917" FT /product="Enolase" FT /EC_number="4.2.1.11" FT /note="Similar to Streptomyces coelicolor enolase Eno FT TR:Q9F2Q3 (EMBL:AL442120) (426 aa) fasta scores: E(): FT 1.2e-111, 73.57% id in 420 aa and to Bacillus subtilis FT enolase Eno SW:ENO_BACSU (P37869) (430 aa) fasta scores: FT E(): 3e-96, 63.98% id in 422 aa" FT /protein_id="CAE49433.1" FT /translation="MADIMHVFAREILDSRGNPTVEAEVFLDDGSHGVAGVPSGASTGV FT HEAHELRDGGERYLGKGVLNAVNNVNEEIADAIAGAEADDQRLIDQAMIALDGTENKSR FT LGANAILGVSIAVAKAAAESAGLPLYRYIGGPNAHVLPVPMMNIVNGGAHADSGVDVQE FT FMIAPIGAESFSEALRMGAEVYHSLKSVIKSKGLSTGLGDEGGFAPSVESTKAALDLIV FT EAIEKAGFKPGADIALALDVASSEFYKDGKYHFEGGEHTAEEMAKVYEQLIAEYPIVSI FT EDPLQEDDWEGYTALTAAIGDKVQIVGDDFFVTNPARLKEGIEKKAANALLVKVNQIGT FT LTETFDAVDLAHRNGYRTMMSHRSGETEDTTIADLAVALGCGQIKTGAPARSERVAKYN FT QLLRIEQQLDDAAVYAGRSAFPRFQG" FT misc_feature 891490..892755 FT /note="HMMPfam hit to PF00113, Enol-ase" FT misc_feature 891496..892734 FT /note="BlastProDom hit to PD000902, PD000902" FT misc_feature 891595..891639 FT /note="FPrintScan hit to PR00148, Enolase signature" FT misc_feature 891802..891852 FT /note="FPrintScan hit to PR00148, Enolase signature" FT misc_feature 891964..892005 FT /note="FPrintScan hit to PR00148, Enolase signature" FT misc_feature 892408..892443 FT /note="FPrintScan hit to PR00148, Enolase signature" FT misc_feature 892477..892518 FT /note="ScanRegExp hit to PS00164, Enolase signature." FT misc_feature 892477..892521 FT /note="FPrintScan hit to PR00148, Enolase signature" FT misc_feature 892564..892617 FT /note="FPrintScan hit to PR00148, Enolase signature" FT stem_loop 892794..892837 FT /note="Score 53: 19/20 (95%) matches, 0 gaps" FT CDS 892885..893418 FT /transl_table=11 FT /locus_tag="DIP0918" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 24.6 kDa protein Rv1024 or MTCY10G2.25c TR:P96376 FT (EMBL:Z92539) (228 aa) fasta scores: E(): 1.5e-08, 31.21% FT id in 157 aa" FT /protein_id="CAE49434.1" FT /translation="MVFTKRRAVPVVNREEKPRGLKLSRPSMKVDGRWLVIYGTIVIVL FT CVAILRPLNTYMDQKAEAARLKASIAEKQIEKERLLAELEKYDSEAYVKEQARKRLGVI FT APGEKAYRVMTPELENQGSHVSTKEETKAKNPWYEKLWDSVTIVEPAEEAEQQGDQPQM FT NLPLIPADPPSEQP" FT misc_feature 892984..893043 FT /note="1 probable transmembrane helix predicted for DIP0918 FT by TMHMM2.0" FT CDS 893459..894025 FT /transl_table=11 FT /locus_tag="DIP0919" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0257 TR:Q9CD40 (EMBL:AL583917) (167 aa) fasta scores: FT E(): 4e-33, 59.49% id in 158 aa" FT /protein_id="CAE49435.1" FT /translation="MSASESDLAIVAEQLGREPRGVIEVSYHTPDGVPGVVMTTPKLDD FT GTPFPTLYYLTEPRLTAEASRLEVAHVMKWMTDRLHSDEELRQDYERAHEYFLAKRNAL FT EDLGTDFSGGGMPDRVKCLHVLIAYALAEGPDHFRLGTEAVALAADHGGLRGTAIPQDW FT PTVESLGMSLDQFDFSHADVPGASK" FT CDS 894022..894972 FT /transl_table=11 FT /locus_tag="DIP0920" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 33.5 FT kDa protein ML0258 or MLCB4.02 TR:O69585 (EMBL:AL023514) FT (317 aa) fasta scores: E(): 9e-53, 52.56% id in 312 aa" FT /protein_id="CAE49436.1" FT /translation="MSVVAAVDCGTNSIRLLISEQTPTGLREITRQMTIIRLGEGVDAT FT GKIDPVAIERARVALSGYVDTMLAHKVTAVRMVATSATRDASNKDDFFAMTADLLGAVV FT PGACAEVISGAEEAELSFIGAVADIPDTDRPVCVIDLGGGSTEFVVGKKTGEILGAYST FT QMGCVRLTERLMVSDPPTAEEIAQAREYVDTQLTVALDNVPIMQASMVVGCAGTFTTVA FT ALALGLDSYDPQRIHGSVHTADRLREETQRLIGETSQQRAAHSVMHLGRADVIAGGSVV FT IEQILAMMQRLGVSDSVTISEKDILDGIVARLLEE" FT misc_feature 894070..894960 FT /note="HMMPfam hit to PF02541, Ppx/GppA phosphatase family" FT tRNA 895059..895132 FT /gene="tRNA-Leu" FT /product="transfer RNA-Leu" FT /anticodon=(pos:895093..895095,aa:Leu) FT /note="tRNA Leu anticodon TAA, Cove score 57.01" FT CDS 895352..895675 FT /transl_table=11 FT /locus_tag="DIP0921" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49438.1" FT /translation="MSYYWRIVLNVSQKVTGFWQETDRSVQGGVFRVVATYKTNAVKEI FT KAMPAAMQTSYYLEPLDPYSENSWGYIPESSSRPCAGLTGSSQTYRSSRSLPQSVNSIR FT HRT" FT CDS 895787..896794 FT /transl_table=11 FT /locus_tag="DIP0922" FT /product="Putative araC-family transcriptional regulator" FT /note="Similar to Pseudomonas aeruginosa probable FT transcriptional regulator PA2488 TR:Q9I0Z4 (EMBL:AE004676) FT (254 aa) fasta scores: E(): 5.9e-10, 34.66% id in 150 aa, FT and to Streptomyces coelicolor putative araC-family FT transcriptional regulator SC9H11.05 TR:Q9KYN4 FT (EMBL:AL356592) (289 aa) fasta scores: E(): 3.3e-05, 29.49% FT id in 217 aa" FT /protein_id="CAE49439.1" FT /translation="MSLPSIKTTNSYCVVLWCDQGSATINAPDRVVQVMAGDVVLAPHG FT AFVTGHGVVLPMAFPDFDGGEHTRRLHMGTAWSKRMIFEFSRSLLGETRPSECIAALFD FT DRARPPRVPEPQAARKVAQKLIAYPADQTPLLEFAQLHNISSRTLQRQFVASTGFTFSE FT WRAALRVSVAADLLAHDFRIGQVSQMVGFSATSSLTRAFKRHTGDTPSSFTSPRMHAVC FT EQQPPMIPATTTFARASDDIALWIYSGTATVTTPGYCRFMGAGETVTIPSGTSTRLDVS FT AGSVALPVPLAAAHDDLTLSDVLAASVNPLAAVELQRLSAQERADVEQVLVPSV" FT misc_feature 896054..896072 FT /note="Putative DtxR-regulated promoter/operator region FT (Differs in 1 base with the promoter/operator named IRP3 in FT Lee et al., Infection and Immunity, FT (1997)65(10):4273-4280)" FT misc_feature 896141..896434 FT /note="ProfileScan hit to PS01124, Bacterial regulatory FT proteins, araC family DNA-binding domain profile." FT misc_feature 896180..896428 FT /note="HMMSmart hit to SM00342, helix_turn_helix, arabinose FT operon control protein, DNA-binding" FT misc_feature 896180..896437 FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix proteins, araC family" FT misc_feature 896183..896248 FT /note="Predicted helix-turn-helix motif with score 1130 FT (+3.04 SD) at aa 133-154, sequence TPLLEFAQLHNISSRTLQRQFV" FT misc_feature 896291..896416 FT /note="ScanRegExp hit to PS00041, Bacterial regulatory FT proteins, araC family signature." FT CDS 896926..897756 FT /transl_table=11 FT /locus_tag="DIP0923" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis putative FT transmembrane protein Rv1072 or MTV017.25 TR:O53420 FT (EMBL:AL021897) (278 aa) fasta scores: E(): 2.4e-47, 58.21% FT id in 280 aa" FT /protein_id="CAE49442.1" FT /translation="MRSSNPVLNSLTGTRQNYAQAGYQQQAFNPMSQYDQYGQSVTSAG FT AAERPMTVDDVVTKTGITVGVIIAFAVVNFALATVNPGLALILTGVGAIGGLITVLIST FT FGRKYGSAAVTLTYAAFEGLFVGGISLVLSGAMVGGQNAGALIGQAVLGTIGVFLGMLY FT VYKTGAVKVTPKFNRILTGSLIGVLVLALGNMVLGFFGINLGLYSGGPIAIIFSLFCIG FT LAAMSFLQDFDIADRLIRQGAPAKNAWGVALGLAVTLVWLYTEILRLLSYFNQR" FT misc_feature order(897103..897156,897175..897243,897271..897339, FT 897358..897417,897460..897528,897541..897609, FT 897667..897735) FT /note="7 probable transmembrane helices predicted for FT DIP0923 by TMHMM2.0" FT stem_loop 897764..897823 FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT CDS complement(897826..898245) FT /transl_table=11 FT /locus_tag="DIP0924" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49443.1" FT /translation="MHKGTIYGALCLSTLLAACSPPHQVDTATKVVTAQSFSATTSTTS FT PPSRSTPEIPGFIDCLGPAMVKPTSITMDCASHDATIQEIKWTKWTQQAAYGTGRIKEK FT GSAPRTVSIVLSRPVQGVGGTVFIDVSVDGEALSL" FT misc_feature complement(898165..898245) FT /note="Signal peptide predicted for DIP0924 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.252 between residues 27 and 28" FT CDS complement(898245..898766) FT /transl_table=11 FT /gene="greA" FT /locus_tag="DIP0925" FT /product="transcription elongation factor" FT /note="Similar to Mycobacterium tuberculosis transcription FT elongation factor GreA or Rv1080c or MT1111 or MTV017.33C FT SW:GREA_MYCTU (O53428) (164 aa) fasta scores: E(): 1.3e-31, FT 57.92% id in 164 aa, and to Escherichia coli transcription FT elongation factor GreA or B3181 SW:GREA_ECOLI (P21346) (158 FT aa) fasta scores: E(): 5.8e-07, 34% id in 150 aa" FT /protein_id="CAE49444.1" FT /translation="MADNQKQYITPETKAKLEEELNALIAHRPVVAAEINERREEGDLK FT ENAGYDAAREMQDQEEARIKQISEILANSTTERAGIVEGVAHIGSVVHVYYNGDKNDKE FT TFLIGTRAAASDNKDLETYSEQSPLGAAVVGAQEGETRQYSAPNGNTISVTIVSAEPYD FT SSKAATPRNS" FT misc_feature complement(898281..898757) FT /note="HMMPfam hit to PF01272, Prokaryotic transcription FT elongation factor, GreA/GreB" FT misc_feature complement(898293..898754) FT /note="BlastProDom hit to PD004918, PD004918" FT misc_feature complement(898347..898397) FT /note="ScanRegExp hit to PS00830, Prokaryotic transcription FT elongation factors signature 2." FT misc_feature complement(898617..898709) FT /note="ScanRegExp hit to PS00829, Prokaryotic transcription FT elongation factors signature 1." FT CDS complement(898944..899411) FT /transl_table=11 FT /locus_tag="DIP0926" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae conserved membrane FT protein ML2392 TR:Q9CB66 (EMBL:AL583925) (144 aa) fasta FT scores: E(): 6.2e-10, 33.56% id in 143 aa" FT /protein_id="CAE49445.1" FT /translation="MPTPKNDPEQPQFQPRQRYGSGSAATASDRGTLSGKLLAVLLVVI FT LAAIVVALAKYVQHSQMTKISGQTANVHVIDDHTFKLTVDITRSDVSVPSYCIVTALNY FT DIAEVGRREIFLPAGGDSTRRIDVELQTTEPAVSGDVYGCATDIPFYLDQS" FT misc_feature complement(899250..899300) FT /note="1 probable transmembrane helix predicted for DIP0926 FT by TMHMM2.0" FT CDS 899713..900600 FT /transl_table=11 FT /locus_tag="DIP0927" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae LmbE (hypothetical FT protein ML2391) TR:Q50060 (EMBL:U15183) (290 aa) fasta FT scores: E(): 9e-62, 55.17% id in 290 aa" FT /protein_id="CAE49446.1" FT /translation="MSSLSSPARLLAIHAHPDDESSKGAATMAKYVAEGHEVMVVTCTG FT GELGDVLNPSLDKTAVEGRIAEVRREEMAQAVKELGVQHRWLGYHDSGFPEGEPHPPVP FT PGSFALEDSDEVAAKIVEIIREFRPHVIVTYDENGGYPHPDHLKVHEVSMLAWDLAGDP FT DYRLDLGQPWAPLKLYYTHGFIRQRMEMFHNLLVEQGKPSPYEGILDRWLEHRADIMAR FT VTTQVYAADYFDRRDAALKAHATQIDPAGTFFATPIETQQQLWPTEEFELARTRVSTSL FT PEDDLFEGIDISAD" FT misc_feature 899725..900546 FT /note="HMMPfam hit to PF02585, Uncharacterized LmbE-like FT protein, COG2120" FT CDS 900655..900996 FT /transl_table=11 FT /locus_tag="DIP0928" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49447.1" FT /translation="MRLPYSGEWKEVGRTVTQQFADMANTVLIVAQQDGAGPVGSEFGK FT ASPIGWFVVVALLAVVLYIGWAFRRRYTRMHRRNLFAQTHGIDPFDHEAIDKAMAEAGV FT LDQSKKYWL" FT misc_feature 900799..900858 FT /note="1 probable transmembrane helix predicted for DIP0928 FT by TMHMM2.0" FT CDS 901021..901818 FT /transl_table=11 FT /locus_tag="DIP0929" FT /product="Putative undecaprenyl pyrophosphate synthetase" FT /note="Similar to Mycobacterium leprae possible FT undecaprenyl pyrophosphate synthetase ML2467 TR:Q9CB36 FT (EMBL:AL583925) (262 aa) fasta scores: E(): 4.1e-57, 60% id FT in 250 aa, and to Bacillus subtilis undecaprenyl FT pyrophosphate synthetase UppS SW:UPPS_BACSU (O31751) (260 FT aa) fasta scores: E(): 2.1e-26, 36.84% id in 247 aa" FT /protein_id="CAE49448.1" FT /translation="MRTLKKFSLRDLAYNAAYPFYEKRLMREIQGVRQPEHVAIMCDGN FT RRWAREAGFADVTHGHRVGAKKIGEMVRWCAHTDVELVTVYLLSTENLGRASDELQMLF FT DIIGDVVDELASPETNCRLRLVGHLDLLPDDVSRRLTQAQDSTNDNTGVFVNVAVGYGG FT RQEIVDAVRELIDAEAAAGTTATEMAEKISVDSISKHLYTSGQPDPDLVIRTSGEQRLS FT GFLLWQAAYSEIWFTDTYWPAFRRVDFLRALREYSKRSRRFGK" FT misc_feature 901141..901815 FT /note="HMMPfam hit to PF01255, Putative undecaprenyl FT diphosphate synthase" FT misc_feature 901147..901755 FT /note="BlastProDom hit to PD003461, PD003461" FT misc_feature 901648..901701 FT /note="ScanRegExp hit to PS01066, Undecaprenyl FT pyrophosphate synthetase family signature." FT CDS 901865..902365 FT /transl_table=11 FT /locus_tag="DIP0930" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49449.1" FT /translation="MVHIRFHSVYGSTARYAHELARRLGTTACDFDTPVPHDAQPLVVL FT SPVHGPSIPAVKFARSVSPREIAVAAVGMTLPSVARSKDCLASMVPASWGRFYLPGSLK FT YSTMQSGHKATMASIVALVAAKPMKSANDKSMISMFQRDTDWVDFSELDAIQHWVLERQ FT NCV" FT CDS complement(902362..903288) FT /transl_table=11 FT /gene="coaA" FT /gene_synonym="rts" FT /gene_synonym="panK" FT /locus_tag="DIP0931" FT /product="pantothenate kinase" FT /EC_number="2.7.1.33" FT /note="Similar to Escherichia coli pantothenate kinase CoaA FT or Rts or PanK or B3974 or Z5545 or ECS4901 SW:COAA_ECOLI FT (P15044) (316 aa) fasta scores: E(): 7.4e-62, 52.27% id in FT 308 aa, and to Mycobacterium tuberculosis pantothenate FT kinase CoaA or Rv1092c or MT1124 or MTV017.45C FT SW:COAA_MYCTU (O53440) (312 aa) fasta scores: E(): 1e-76, FT 64.42% id in 312 aa" FT /protein_id="CAE49450.1" FT /translation="MARDKDLSPYLDFDRETWRHLRMSMPQVLTEQEVVELRGIGENID FT LDEVAEVYLPLSRLIHLQVHARQELTQATETFLGEKAPHIPFVIGVAGSVAVGKSTTAR FT LLQVLLQRWDEHPRVDLVTTDGFLHPTEILKKRGILDRKGFPESYDQRALLRFVTDVKA FT GKAHVKAPVYSHTLYDRVENECVTVSRPDILIVEGLNVLQTGPTLSVSDLFDFSVYVDA FT ALEDIERWYIDRFLKLRQLAFRAPNAHFSHYADMGDRAATDEARRIWQTINLPNLVEHI FT LPTRVRASLVLCKGADHKVARVRMRKI" FT misc_feature complement(902614..903027) FT /note="HMMPfam hit to PF00485, Phosphoribulokinase / FT Uridine kinase family" FT misc_feature complement(902749..902796) FT /note="FPrintScan hit to PR00988, Uridine kinase signature" FT misc_feature complement(902980..903033) FT /note="FPrintScan hit to PR00988, Uridine kinase signature" FT misc_feature complement(902989..903012) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 903498..904787 FT /transl_table=11 FT /gene="glyA" FT /locus_tag="DIP0932" FT /product="serine hydroxymethyltransferase" FT /EC_number="2.1.2.1" FT /note="Similar to Escherichia coli serine FT hydroxymethyltransferase GlyA or B2551 SW:GLYA_ECOLI FT (P00477) (417 aa) fasta scores: E(): 1e-74, 51.07% id in FT 419 aa, and to Corynebacterium glutamicum serine FT hydroxymethyltransferase GlyA TR:AAK60516 (EMBL:AF327063) FT (434 aa) fasta scores: E(): 1e-137, 83.13% id in 427 aa" FT /protein_id="CAE49451.1" FT /translation="MTDDIRYQSLTELDPEVAAAITGELDRQRSTLEMIASENFVPRAV FT LQAQGSVFTNKYAEGYPGRRYYGGCENADIVEDLARNRAKEVFGAEFANVQPHAGAQAN FT AAVLMALANPGDKIMGLSLAHGGHLTHGMHLNFSGKLYEVAAYEVEPDNFRLDMDKIRE FT QALKEKPQVLIAGWSAYPRHQDFAAFRSIADEVDAKLWVDMAHFAGLVAAGLHPSPVPY FT ADVVSTTVHKTLGGPRSGMILSKQEYAKKLNSAVFPGQQGGPLMHAIVAKAVAMKIAAT FT EEFKDRQQRTLDGAQIIAERLTGADCKAAGVDVLTGGTDVHLVLVDLRNSQMDGQQAED FT LLHEVGITVNRNAVPFDPRPPMVTSGLRIGTPALATRGFDAAGFTEVADIIATALAQGA FT GADTEQLRARVAKLAEQYPLYEGLEDWKLL" FT misc_feature 903525..904670 FT /note="HMMPfam hit to PF00464, Serine FT hydroxymethyltransferase" FT CDS complement(904858..905202) FT /transl_table=11 FT /locus_tag="DIP0933" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 14.7 FT kDa protein 2SCG38.16 TR:Q9EX03 (EMBL:AL445503) (132 aa) FT fasta scores: E(): 1.2e-18, 53.39% id in 103 aa" FT /protein_id="CAE49452.1" FT /translation="MKPQTAAKKLGIFLPATPEEFQNNALTHDEFVELQANPPQWLQDL FT RRNGPHPRPVVAQKLGITITALKRNDMDKALTTAEIKSLLENQPEWLRAARTSLAENRT FT TETGNDHDEN" FT CDS 905267..905947 FT /transl_table=11 FT /locus_tag="DIP0934" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Streptomyces coelicolor putative FT regulatory protein 2SCG38.15c TR:Q9EX04 (EMBL:AL445503) FT (278 aa) fasta scores: E(): 2.1e-10, 28.39% id in 236 aa" FT /protein_id="CAE49453.1" FT /translation="MLTLSFATGTEPNKWFTRFEERTDHGGLRTLSDDDPLSLLVDATA FT DLALVRLPDPRMDNDDTVHVVELYQESMGVALPKEHTLTLLDVVEPSDLDGEIINYITP FT PSLEVDVAAVRAQLQMVAANVGVVIAPRPLLKVLSGKLVEHREFSDPQRYGQARTRIAL FT VWKKERDGEDIQDFVGIAKGRTVQSSRQSNAKKVSAREKTLAKQKRRKEAGKKPVRKGG FT RRKR" FT CDS 906029..906595 FT /transl_table=11 FT /locus_tag="DIP0935" FT /product="Putative phosphinothricin N-acetyltransferase" FT /note="Similar to Alcaligenes faecalis phosphinothricin FT N-acetyltransferase Bar SW:PAT_ALCFA (P31668) (197 aa) FT fasta scores: E(): 7.8e-08, 31.176% identity in 170 aa FT overlap and to Streptomyces coelicolor phosphinothricin FT N-acetyltransferase Bar or SCE22.20 SW:PAT_STRCO (P21861) FT (171 aa) fasta scores: E(): 5.3e-07, 25.56% id in 176 aa" FT /protein_id="CAE49454.1" FT /translation="MNAPSQPDFVIRPLRRTDFGQVQQIYLLGLETGHASYEIEAPSWE FT KFSTSKIPETLFVAVEKTDDSKVLGWVSAAPISSRTVFRGVVEDSIYIHPDARGRGVAG FT ALVDKLIDVCQHLGFWAIHSWIFPENEGSARLHASRGFEKVGTFSHLAKMTYGEMAGQW FT RDTDIWEKLLPKPELADHEAAAVEP" FT misc_feature 906206..906457 FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family" FT CDS complement(906600..908165) FT /transl_table=11 FT /locus_tag="DIP0936" FT /product="Putative drug transport membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane transport protein SCC8A.02c TR:Q9KY46 FT (EMBL:AL356892) (689 aa) fasta scores: E(): 8.5e-70, 42.83% FT id in 523 aa, and to Mycobacterium tuberculosis CDC1551 FT drug transporter MT1926 TR:AAK46198 (EMBL:AE007049) (687 FT aa) fasta scores: E(): 1.1e-57, 37.45% id in 518 aa" FT /protein_id="CAE49455.1" FT /translation="MSTQLSPEKVREPAAHHRPVGWIIAALMLSMLMGSLGQMIFATAL FT PTIVGDLGGVEHMSWVITAFLLGQTIAMPLFGKLGDVINRKPLFIFANLLFMLGSLIGG FT LATSMSMLILARAIQGVAGGASMILSQAITAEVTTARERGKYMGVMGTVFGVSSVLGPV FT LGGWFTDGPGWRWGLWLNLPLGAVTVITIWLLLSLPSKDVKFRLDWWGTLTMAIATASL FT VLFVTWGGRDYAWSDPIIVGLIASFVVFGIIFVAVELRVDDPLIPMTLFQNRNFTLTTI FT AGLAIGVIMFGSMAYLPTYLQMVHHMSPTKAGLTMITMMSGLMISSIGVGNLVSRTGRY FT KTFPLIGQIITSIALVLLSRLHYNDSLVTVGIYMFIFGVGLGCTMQILVLIVQNSFSLA FT MVGTATGSNNFFRQVGGAVGSALIGSMFMTNLKEQIGTHLPTAVQQAVAQGYPMDAVDK FT LQSASRLTPAFVNHLPQVIQDAIAVSYNDALTPVFLLVAPLSILAAILLALVHETELSQ FT TIER" FT misc_feature complement(order(906636..906701,906873..906923, FT 906987..907052,907083..907139,907161..907226, FT 907257..907322,907383..907448,907479..907544, FT 907566..907631,907662..907727,907764..907829, FT 907845..907901,907938..907994,908040..908105)) FT /note="14 probable transmembrane helices predicted for FT DIP0936 by TMHMM2.0" FT misc_feature complement(906786..908102) FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature complement(906879..906938) FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature complement(907479..907535) FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature complement(907656..907730) FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature complement(907659..907727) FT /note="FPrintScan hit to PR01035, Tetracycline resistance FT protein signature" FT misc_feature complement(907737..907814) FT /note="ScanRegExp hit to PS00217, Sugar transport proteins FT signature 2." FT misc_feature complement(907752..907817) FT /note="FPrintScan hit to PR01035, Tetracycline resistance FT protein signature" FT misc_feature complement(907758..907820) FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature complement(908016..908090) FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature complement(908019..908069) FT /note="FPrintScan hit to PR01035, Tetracycline resistance FT protein signature" FT misc_feature complement(908040..908165) FT /note="Signal peptide predicted for DIP0936 by SignalP 2.0 FT HMM (Signal peptide probability 0.958) with cleavage site FT probability 0.807 between residues 42 and 43" FT CDS complement(908167..908814) FT /transl_table=11 FT /locus_tag="DIP0937" FT /product="Putative tetR family transcriptional regulator" FT /note="Similar to Streptomyces coelicolor putative FT tetR-family transcriptional regulator SCF56.06 TR:Q9RD60 FT (EMBL:AL133424) (213 aa) fasta scores: E(): 4.4e-06, 35.59% FT id in 118 aa" FT /protein_id="CAE49456.1" FT /translation="MSTQPDTSLRATKRLKTRISVEDAATALVLRDGFDNVTVEDICAA FT AEISKRTFFNYFDSKENAVFGDIQVDILPQLREEFLSHPHEDLPEAVIRLHMNLVFSGK FT DFDPHTRGEIIRRRKTIRHNNPERSFNYNALYHKVFINFKTLVNEYFEHFPEQRRLGGD FT VDVEATAVVLSSSYAIRFGFTLWADSPSASFSTLEESCLEALVHLRTINKGL" FT misc_feature complement(908632..908748) FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT CDS complement(908959..910362) FT /transl_table=11 FT /gene="fumC" FT /locus_tag="DIP0938" FT /product="fumarate hydratase class II" FT /EC_number="4.2.1.2" FT /note="Similar to Escherichia coli fumarate hydratase class FT II FumC or B1611 SW:FUMC_ECOLI (P05042) (467 aa) fasta FT scores: E(): 7.8e-76, 50.55% id in 453 aa, and to FT Mycobacterium tuberculosis CDC1551 fumarate hydratase FT MT1130 TR:AAK45388 (EMBL:AE006993) (474 aa) fasta scores: FT E(): 2.1e-130, 78.91% id in 460 aa" FT /protein_id="CAE49457.1" FT /translation="MTEQQYRIEHDTMGEVKVPIDALWRAQTQRAVENFPISGRGLEAA FT QIRAMGLLKAACAQVNKDRGLLAPEQADAIIAAATEVAEGKHDDQFPIDVFQTGSGTSS FT NMNSNEVIASIAKANGVEVHPNDHVNMGQSSNDTFPTATHIAATEAAVKDLIPGLKVLH FT ASLAKKAAEWENVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVEACLPRLGELSI FT GGTAVGTGLNTPADFGQKVTAELVKLTGVSELRECVNHFEAQASRDGLVEFSGAMRTIA FT VSLTKIANDIRWMGSGPLTGLGEIHLPDLQPGSSIMPGKVNPVLCETATQVAAQVIGND FT AAIAFGGAQGAFELNVFIPMMARNVLESSRLLANTARVFAERLVDGIHPNEERMRTLAE FT SSPSIVTPLNSAIGYEAAAKVAKTALKEGKTIRQTVIDLGFVDGEKLTEEELDKRLNVL FT AMANTDRDK" FT misc_feature complement(908989..910323) FT /note="HMMPfam hit to PF00206, Lyase" FT misc_feature complement(909376..909426) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(909397..909426) FT /note="ScanRegExp hit to PS00163, Fumarate lyases FT signature." FT misc_feature complement(909481..909564) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(909790..909840) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(909793..909855) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature complement(909913..909981) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature complement(909922..909978) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT CDS complement(910620..911636) FT /transl_table=11 FT /locus_tag="DIP0939" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SCK7.20c TR:Q9FBN2 (EMBL:AL391754) FT (343 aa) fasta scores: E(): 7.1e-79, 67.89% id in 327 aa, FT and to Escherichia coli protein GlpX or B3925 SW:GLPX_ECOLI FT (P28860) (336 aa) fasta scores: E(): 4.6e-39, 44.61% id in FT 325 aa" FT /protein_id="CAE49458.1" FT /translation="MTNLNPEIPDRNLALELVRVTEAAALASGRWVGRGMKNEGDGAAV FT DAMRKLINSVQMNGVVVIGEGEKDEAPMLFNGEQVGTGEGAAVDIAVDPVDGTTLMAEG FT RPNAISVLAAAERGSMYDPSAVFYMRKIAVGPEAAGTIDINAPVEYNIKAVAKAKGIAP FT DQVTVVVLDRPRHETLIKDIREAGAKVRLIRDGDVAGAVAAAQATNSVDIMMGTGGTPE FT GIITACAMKCMGGEIQGVLAPKDDAEAAKARNAGHELNRVLGTHDLVSSDNCFFVATGV FT TNGDMLRGVSYRADGATTRSLVMRSKSGTVRFIESTHKLHKLQEYSVVDYSQISPRK" FT CDS 911934..912518 FT /transl_table=11 FT /locus_tag="DIP0940" FT /product="Putative membrane protein" FT /note="Low similarity to Mycobacterium tuberculosis FT hypothetical 24.6 kDa protein Rv1100 or MTV017.53 TR:O53448 FT (EMBL:AL021897) (233 aa) fasta scores: E(): 8e-06, 28.92% FT id in 204 aa" FT /protein_id="CAE49459.1" FT /translation="MCVAVEKPRIYQGARDIILSLGSILLIVAVTIGFTGMCSFDRGNK FT DNAPIQRVDARTFLEMEARGADFAVRYPGEIEGWQANSARRITIAKASAPVVGWVVNKD FT SYVQLAQTGVDKDEAIKRYDGNLRTRSGEHSLGGKVVEEYSSEDRDVRDIWVVDLGDAR FT VIISGAAPREEFDRVITKMIEASPLPGPASQ" FT misc_feature 911982..912050 FT /note="1 probable transmembrane helix predicted for DIP0940 FT by TMHMM2.0" FT CDS complement(912528..912785) FT /transl_table=11 FT /gene="xseB" FT /locus_tag="DIP0941" FT /product="Exodeoxyribonuclease VII small subunit" FT /EC_number="3.1.11.6" FT /note="Similar to Mycobacterium tuberculosis probable FT exodeoxyribonuclease VII small subunit XseB or Rv1107c or FT MT1138 or MTV017.60c SW:EX7S_MYCTU (O53455) (85 aa) fasta FT scores: E(): 1.9e-13, 57.83% id in 83 aa, and to FT Escherichia coli exodeoxyribonuclease VII small subunit FT XseB or B0422 or Z0525 or ECS0476 SW:EX7S_ECOLI (P22938) FT (79 aa) fasta scores: E(): 0.015, 38.59% id in 57 aa" FT /protein_id="CAE49460.1" FT /translation="MPHDIIGQGTGTNAFAPVEELSYEQARDELVEVVRILELGQMGLD FT ESLAYWERGEALAKRCEEHLNGAQQRIEKALGETSQGHEQ" FT misc_feature complement(912531..912662) FT /note="HMMPfam hit to PF02609, Exonuclease VII small FT subunit" FT CDS complement(912814..914055) FT /transl_table=11 FT /gene="xseA" FT /locus_tag="DIP0942" FT /product="Exodeoxyribonuclease VII large subunit" FT /EC_number="3.1.11.6" FT /note="Similar to Mycobacterium tuberculosis probable FT exodeoxyribonuclease VII large subunit XseA or Rv1108c or FT MT1139 or MTV017.61c SW:EX7L_MYCTU (O53456) (415 aa) fasta FT scores: E(): 1.4e-83, 56.29% id in 405 aa, and to FT Escherichia coli exodeoxyribonuclease VII large subunit FT XseA or B2509 SW:EX7L_ECOLI (P04994) (456 aa) fasta scores: FT E(): 9.5e-28, 29.89% id in 455 aa" FT /protein_id="CAE49461.1" FT /translation="MAAQPNAPESAWPVRELNSKVKSWIERLGHLWVEGQITQLNMKPS FT WKFSYITLRDPEAEASVQLTCATSLLHSLPSRLQDGDRVVVYGKPAFYEGRGSFSLWVT FT DIRPVGVGELLARIERLRQQLASEGLFDPALKKPLPFLPHTIGLITGRGSAAERDVLAV FT AHSRWPEVKFNVINTAVQGARAVPEIIEALQRLDADPSVDVIIIARGGGSVEDLLPFSE FT EALQRAVVAAHTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKKVVPDVAAERQLIAEL FT RSRSAAALRGWVHKERQQLAAVRSRPALADPVRAITLHREEIARSISSIRRDMRYMLST FT ERATVASLRQQVAALGPSATLARGYAVVQVVPRDGSAPEVVTTIGMSPPGSQLRIRVAD FT GSITAAAMQTTPAD" FT misc_feature complement(912967..913452) FT /note="HMMPfam hit to PF02601, Exonuclease VII, large FT subunit" FT misc_feature complement(913729..913965) FT /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding FT domain" FT CDS 914162..915163 FT /transl_table=11 FT /gene="lytB" FT /locus_tag="DIP0943" FT /product="Putative penicillin tolerance protein" FT /note="Similar to Escherichia coli LytB protein or B0029 or FT Z0034 or ECS0032 SW:LYTB_ECOLI (P22565) (316 aa) fasta FT scores: E(): 3.1e-54, 51.61% id in 310 aa, and to FT Mycobacterium tuberculosis LytB protein homolog 1 LytB1 or FT Rv1110 or MT1141 or MTV017.63 SW:LYB1_MYCTU (O53458) (335 FT aa) fasta scores: E(): 2.3e-80, 67.56% id in 333 aa" FT /protein_id="CAE49462.1" FT /translation="MCMTSPDQLTASESADTASAHKRVLVAAPRGYCAGVDRAVETVEK FT ALEKYGAPVYVRKEIVHNRYVVDTLAERGAIFVDETTEAPEGAHLVFSAHGVSPAVHKE FT AEALSLKTLDATCPLVTKVHNEVKRFARDGYHILLVGHEGHEEVEGTAGEAPDVTHLVD FT GVESVDKLPEFLHDEKLIWLSQTTLSVDETMTIVKKLHERFAHLQDPPSDDICYATQNR FT QVAVKAIAAESDVVIVVGSQNSSNSKRLVEVALQAGAGASYLVDYAHQIDESWLDGATT FT VGVSSGASVPEILVRGVLEFLDARGFHDVKEITTAAEKITFALPRDLRPART" FT misc_feature 914231..915076 FT /note="HMMPfam hit to PF02401, LytB protein" FT CDS complement(915227..916018) FT /transl_table=11 FT /locus_tag="DIP0944" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49463.1" FT /translation="MQNKTEHKRHSQAHTTYANDQFFGISLWSSLVLMTAAMVTGLLIS FT QATGSVGWPFLTIFVAFSLFTALLTLPSGLFLLVASLPLFFGVGILATAWLIVKSSAAE FT GAPFSTTQLITTIYPITEHFPLLAATTIGAGLIAYLRVSLLKRKYKRVTTIAERTRRAQ FT SETDRRNYTAASKARTQAQRSSKPQRTRASSRSRRDNSVTVEELMRRRQEQQQTGAKSF FT APRPTRTAAQREAAERDLTRRLVNPDPEIHRTRTFDDDLYS" FT misc_feature complement(order(915584..915649,915725..915790, FT 915806..915871,915887..915952)) FT /note="4 probable transmembrane helices predicted for FT DIP0944 by TMHMM2.0" FT misc_feature complement(915878..916018) FT /note="Signal peptide predicted for DIP0944 by SignalP 2.0 FT HMM (Signal peptide probability 0.727) with cleavage site FT probability 0.454 between residues 47 and 48" FT CDS complement(916085..917503) FT /transl_table=11 FT /locus_tag="DIP0945" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor integral membrane FT protein SCF6.09 TR:Q9RJL9 (EMBL:AL121849) (363 aa) fasta FT scores: E(): 2e-46, 44.73% id in 342 aa, and to Escherichia FT coli putative permease perm PerM or B2493 or Z3755 or FT ECS3355 SW:PERM_ECOLI (P77406) (353 aa) fasta scores: E(): FT 4.7e-17, 29.2% id in 339 aa" FT /protein_id="CAE49464.1" FT /translation="MTSDIPTPEESAPDRVTPRTEHAGSSTEATDVFEAMSPHDDHARI FT DRSEVIAHGVKVLSTWCIRILIIAATAFATWYLLKQVWRGVLPVILALIVCTVLWPPTI FT WMRRKGIPSGIAALISILASFGFFGFLIWIIAPDVGRQSQTLYFQAFEGIQKIQLWLQG FT PPLSLDSEELNDRINAAAGWFQSKSGTIAGEIFSGLGVATSVLVTLGVVLVLTFFFLKD FT GEKFLPWVRGIVGKRAGWHLTELLARSWITLCGFVRAQALVSLVDAIAIGGGLLLLGVP FT MALALAVLTFIAGFIPIVGAFVAGTLAVLVALVSLGLTKAVITLIIVLAVQQLEGNVLS FT PILQSRAMNLHPVVVLVSVTLGGSLFGIVGAFLAVPTAAMIAVLFRYLQDMTALRAGEK FT TADDIKFVTRAGSITGKFGEQKNQELIAAKLKSQEQQASPPRESDTQPDVDHPLVVQGI FT KAKISDLTHLFHKP" FT misc_feature complement(916337..917320) FT /note="HMMPfam hit to PF01594, Domain of unknown function FT DUF20" FT misc_feature complement(order(916349..916414,916511..916576, FT 916592..916657,916844..916909,917093..917158, FT 917189..917245,917267..917332)) FT /note="7 probable transmembrane helices predicted for FT DIP0945 by TMHMM2.0" FT CDS complement(917593..917763) FT /transl_table=11 FT /locus_tag="DIP0946" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49465.1" FT /translation="MSTAAILMMLLFIIVIWGGLALALITLIKHPDKTSGILGEHDFAT FT DDVLIAQEHTS" FT misc_feature complement(917677..917763) FT /note="Signal peptide predicted for DIP0946 by SignalP 2.0 FT HMM (Signal peptide probability 0.748) with cleavage site FT probability 0.364 between residues 29 and 30" FT misc_feature complement(917683..917748) FT /note="1 probable transmembrane helix predicted for DIP0946 FT by TMHMM2.0" FT CDS complement(917763..919412) FT /transl_table=11 FT /locus_tag="DIP0947" FT /product="Putative sodium-dependent ABC transport system FT membrane protein" FT /note="Similar to Pasteurella multocida hypothetical FT protein PM0718 TR:Q9CMU0 (EMBL:AE006109) (502 aa) fasta FT scores: E(): 6.7e-106, 57.72% id in 492 aa, and to FT Haemophilus influenzae hypothetical sodium-dependent FT transporter HI0736 SW:Y736_HAEIN (P44849) (508 aa) fasta FT scores: E(): 2.9e-104, 55.17% id in 502 aa" FT /protein_id="CAE49466.1" FT /translation="MTSTREQGQRRETFSSRWVFILAAIGSAVGLGNIWRFPYVAYQNG FT GGAFLLPYLIALLTAGIPLLFLDFAIGHRYRGSSPLAFRRIKRWAEVGGWIQLGIAFFI FT TIYYAAIIAWAALYTVKSINQAWGDDPNAYFFGDFLQFDETATFSTDFVGPITIALALV FT WIAAIIVLAMGVDAGIGRVSKIFMPILTVLFIIVVVRALFLDGAATGLNAFFTPHWEAL FT KDPTVWVAAYGQIFFSLSVGFGIMLTYSSYLKPRSNLTGTGLVTAFANSSFEVLAGIGV FT FATLGFMATQQNVAVNEVATSGIGLAFVAFPTIINQMPFGAVFGILFFGSLTVAGFTSL FT FSLLEVVVSGVRDKTNLSRKATAVTVGILMACLSIVLFATTSGLATLDIMDKFTNNVGI FT VAIALISIVIIDWILRRVDEFSLHLNMVSSFRVGTLWRICVVNVTTLVLGFTLFQELAS FT LISEPYGGYTSTQVAWFGWGVIAFIIVSSIVMSMIGWPRTTPIDGPPGSDFGVETENER FT TPSKPQKYDHGKHGKRRIAGFAIEQYSKEELH" FT misc_feature complement(917913..919385) FT /note="ProfileScan hit to PS50267, Sodium:neurotransmitter FT symporter family profile." FT misc_feature complement(order(917931..917996,918042..918107, FT 918171..918221,918252..918317,918381..918446, FT 918549..918614,918654..918719,918801..918866, FT 918888..918953,919071..919136,919197..919262, FT 919308..919373)) FT /note="12 probable transmembrane helices predicted for FT DIP0947 by TMHMM2.0" FT misc_feature complement(918054..918962) FT /note="HMMPfam hit to PF00209, Sodium:neurotransmitter FT symporter family" FT misc_feature complement(918165..918227) FT /note="FPrintScan hit to PR00176, Sodium/chloride FT neurotransmitter symporter signature" FT misc_feature complement(918402..918461) FT /note="FPrintScan hit to PR00176, Sodium/chloride FT neurotransmitter symporter signature" FT misc_feature complement(919008..919382) FT /note="HMMPfam hit to PF00209, Sodium:neurotransmitter FT symporter family" FT misc_feature complement(919059..919139) FT /note="FPrintScan hit to PR00176, Sodium/chloride FT neurotransmitter symporter signature" FT misc_feature complement(919212..919271) FT /note="FPrintScan hit to PR00176, Sodium/chloride FT neurotransmitter symporter signature" FT misc_feature complement(919266..919310) FT /note="ScanRegExp hit to PS00610, Sodium:neurotransmitter FT symporter family signature 1." FT misc_feature complement(919293..919358) FT /note="FPrintScan hit to PR00176, Sodium/chloride FT neurotransmitter symporter signature" FT CDS 919766..920851 FT /transl_table=11 FT /locus_tag="DIP0948" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor putative ATP/GTP FT binding protein SCBAC20F6.04 TR:Q9ADE6 (EMBL:AL590942) (362 FT aa) fasta scores: E(): 2.2e-89, 71.86% id in 359 aa" FT /protein_id="CAE49467.1" FT /translation="MSLTLGIVGLPNVGKSTLFNALTRNDVLAANYPFATIEPNVGLVE FT LPDARLNRLAEIFQSERILPATVSFVDIAGIVKGASEGEGMGNAFLANIREADAICQVV FT RAFADDNVIHVDGRVDPSSDISVINTELILADLQTVEKALPRLEKEARKNKDLAETVEA FT TKKAQAILEDDRTLFAASKNGEIDLALVRELHLMTAKPFLYVFNSDEEVLTDDARKQQL FT RDLVAPAEAVFLDAKTETELLELDEDEALELLESVGQTEPGLATLAKAGFATLGLQTYL FT TAGPKESRAWTIKQGSLAPQAAGVIHTDFEKKFIKAEIVSFDDLDAAGSIAEAKAQGKM FT RMEGKDYVMHDGDVCDFKIGG" FT misc_feature 919778..919840 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature 919778..919936 FT /note="HMMPfam hit to PF01018, GTP1/OBG family" FT misc_feature 919790..919813 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 919841..919897 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature 919973..920020 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature 920024..920080 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT CDS complement(920928..921842) FT /transl_table=11 FT /locus_tag="DIP0949" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Deinococcus radiodurans conserved FT hypothetical protein DR1297 TR:Q9RUT5 (EMBL:AE001977) (311 FT aa) fasta scores: E(): 2.2e-57, 51.92% id in 312 aa, and to FT Mycobacterium tuberculosis CDC1551 conserved hypothetical FT protein MT3176.1 TR:AAK47515 (EMBL:AE007134) (306 aa) fasta FT scores: E(): 5.1e-55, 54.54% id in 297 aa" FT /protein_id="CAE49468.1" FT /translation="MAGGLAALLDDVALIARTASASVDDVAAAAAKTSAKAAGVVVDDT FT AVTPQYVRGVTPARELPIIWRIAKGSLVNKLCIILPIALLLNAVAPWALTPILMLGGAF FT LCFEGAEKVWEMVTGKQHSSEEEAGAKDENTLVRGAITTDLILSAEIMVISLNEVADKT FT IWMEGAVLVAVGIFITAVVYGAVALLVKLDDVGLFYQRKDSDTARAFGAGLVKAMPVVL FT NAISFIGMLAMLWVGGHIVIGGLDSLNLWHAPHDVIHHLVHSVEHLGGAVAWTTETVGS FT LIFGLILGFIVVAFIAPFHKKKH" FT misc_feature complement(order(920943..921008,921117..921182, FT 921273..921338,921549..921614)) FT /note="4 probable transmembrane helices predicted for FT DIP0949 by TMHMM2.0" FT CDS 921923..922816 FT /transl_table=11 FT /locus_tag="DIP0950" FT /product="Putative oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative FT oxidoreductase SCF76.02c TR:Q9RJH2 (EMBL:AL121600) (309 aa) FT fasta scores: E(): 2e-19, 31.56% id in 301 aa, and to FT Pyrococcus abyssi probable 2-dehydropantoate 2-reductase FT ApbA or PAB0512 SW:APBA_PYRAB (Q9V0N0) (300 aa) fasta FT scores: E(): 1.5e-15, 27.36% id in 307 aa" FT /protein_id="CAE49469.1" FT /translation="MHIVIVGAGAVGGFFGGLLHESGTKVTFVARGKSLDALQRRGMRL FT HDASGVRDIRVPVVEDLSHVPDADVVILATKTLGSVDVPKNLPKSAVLVTTQNSVEMPH FT IAVEALGVDRVIPGVVRSFLTKRGPAEAEFSGGIFTFTFGCMSEATRGIVDKLAHVLDR FT AGIEPVVHPAIMTDIWFKAMFVTCFGALGALVNQPLGVVRTTYRDDFKALINEVVTAGQ FT AHGVDFPEDVVDRVLAFADAQPKGATSSMQRDLANGLPSELDAQAGAVVRMAQRVGVDA FT RLHHLVGNVLSHKHSD" FT misc_feature 922052..922810 FT /note="HMMPfam hit to PF02558, Ketopantoate reductase FT PanE/ApbA" FT CDS 922958..923551 FT /transl_table=11 FT /locus_tag="DIP0951" FT /product="Putative membrane protein" FT /note="Similar to Bacillus subtilis YkoE TR:O34738 FT (EMBL:AJ002571) (199 aa) fasta scores: E(): 5.8e-16, 39.36% FT id in 188 aa" FT /protein_id="CAE49470.1" FT /translation="MNRSKNSWRVIDIVIASVIAIATGLLFWVWNTIGYAWYSAADAFT FT PGFGGIAVGIWLIGGVLGGLIIRKPFAAIYVELIAACVSAGIGNQWGIETIYSGLAQGL FT GAELVFAFFLYRRFGLVVAALSGVGAAVGAFVLELFTSGNLAKSAVFNLTYLGSMAISG FT AVLAGVLGYLLVKALAQTGALDRFAAGRQARALV" FT misc_feature 922958..923065 FT /note="Signal peptide predicted for DIP0951 by SignalP 2.0 FT HMM (Signal peptide probability 0.904) with cleavage site FT probability 0.561 between residues 36 and 37" FT misc_feature order(922976..923044,923087..923155,923168..923236, FT 923309..923377,923414..923482) FT /note="5 probable transmembrane helices predicted for FT DIP0951 by TMHMM2.0" FT CDS complement(923566..924588) FT /transl_table=11 FT /locus_tag="DIP0952" FT /product="Putative chloride channel related membrane FT protein" FT /note="Similar to Neisseria meningitidis chloride channel FT protein-related protein NMB0982 TR:Q9JZM8 (EMBL:AE002449) FT (380 aa) fasta scores: E(): 1.4e-21, 31.25% id in 352 aa" FT /protein_id="CAE49471.1" FT /translation="MALISLGVGALAGTCWWALRRRGPIVTVTAALSTDTPLPLWRTLA FT DALLQLLIVTAGASLGKEQAPRQLAAALAERIAPAHNDTDRHRRIRLLAAAAGAGLAAM FT YHVPIAGIFFVLELLPVRRDRATIATTIAVCAIATTVASPVVPAPLYGFPHEALGVNDF FT LPLLVVTIVATVVAVMWRRLTVTQLQRSYTGPWLVITLPLALAITYAVGTWFPAVHGNG FT QLVLDVAFGTDITALMAFVLLLAKLMATLVCIRAGAVGGVLTPSLAVGAAAGVCVAVLF FT GAPNAVMALVAAAIVLAITQRAPLFGAAMAIELTHPDIWLAATVVVTAAAGFWCTRKIR FT " FT misc_feature complement(order(923581..923631,923692..923757, FT 923821..923886,923947..924012,924049..924099, FT 924145..924210,924232..924297)) FT /note="7 probable transmembrane helices predicted for FT DIP0952 by TMHMM2.0" FT misc_feature complement(923683..923733) FT /note="FPrintScan hit to PR00762, Chloride channel FT signature" FT misc_feature complement(924238..924297) FT /note="FPrintScan hit to PR00762, Chloride channel FT signature" FT misc_feature complement(924394..924453) FT /note="FPrintScan hit to PR00762, Chloride channel FT signature" FT misc_feature complement(924499..924588) FT /note="Signal peptide predicted for DIP0952 by SignalP 2.0 FT HMM (Signal peptide probability 0.663) with cleavage site FT probability 0.469 between residues 30 and 31" FT CDS 924885..926264 FT /transl_table=11 FT /locus_tag="DIP0953" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Staphylococcus aureus (strain N315) FT SA0928 protein or SAV1076 TR:BAB57238 (EMBL:AP003132) (466 FT aa) fasta scores: E(): 6.9e-32, 34.18% id in 433 aa" FT /protein_id="CAE49472.1" FT /translation="MTDHVIAHAFSYRHASRRKPALVDLTLKISRGERVLLLGASGSGK FT STLLAAIAGVLADEDGEHSGELQVSGTPGMVLQDPDSQVISSRVGDDVAFGCENMCVPR FT DQIWPRVTQALAQVGLDLPLDHPTSELSGGQKQRLALAGVIAMGADIVLLDEPTANLDP FT DGVREVVSNISRAVETTGATMIVVEHRVSTWLDHVDRIIALGPDSRVLADGPARDVIAK FT HGRELSELGIWVPENDPQLPAALTPTHSDTAIHARELAVGWNQPLGTYGFDIPAGASTV FT ITGANGKGKSTLLLTLAGLLPAHSGRVEVAHNIARGLHTDPLRWKSKELSSRFGFVFQD FT PEHQFVAATVREEMRVGLHDHNHLARADLLLERLRLDHLAEANPFTLSGGQKRRLSVAT FT ILVNTPDVVFLDEPTFGQDRTTFIELVTLLRELTDAGTTVVSITHDELYRRCLGDKEIA FT L" FT misc_feature 924975..925532 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 924978..925499 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 924984..925052 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 924999..925022 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 925275..925319 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 925275..925493 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 925710..926222 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 925713..926261 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 925719..925787 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 925734..925757 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 926043..926087 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 926043..926219 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 926261..927016 FT /transl_table=11 FT /locus_tag="DIP0954" FT /product="Putative ABC transport system membrane protein" FT /note="Low similarity to Bacillus subtilis YkoC TR:O34572 FT (EMBL:AJ002571) (254 aa) fasta scores: E(): 1.3e-06, 24.48% FT id in 241 aa" FT /protein_id="CAE49473.1" FT /translation="MNLLQATNPVTRVAALMLLTTPLLLSVDVVSAAVSLVLTIVLSPL FT AGVGVGTLLRRGFPLLIATPIAGISMALYGRPEGHEYFSFLFAHVTDNSLQLAAAIMVR FT VLAVGLPAIVLLAHIDPTELGDGLAQILRLPHRFVISAVASTRMISLFTRDWQSMRRAR FT RVRGIDDSNRVRSSFSMVFGLLVLAVRRGSKLATAMEARGFGRKSERTWARESTVGAAD FT AVLLLVCVAASTSAIVAAIVTGSFRFLGA" FT misc_feature 926261..926356 FT /note="Signal peptide predicted for DIP0954 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.940 between residues 32 and 33" FT misc_feature order(926345..926413,926432..926485,926543..926611, FT 926930..926998) FT /note="4 probable transmembrane helices predicted for FT DIP0954 by TMHMM2.0" FT CDS 927013..927471 FT /transl_table=11 FT /locus_tag="DIP0955" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49474.1" FT /translation="MIVLIDGPSGSGKTTFAGFLGEILGMRIVHFDDLYPGWHGLAAGV FT KIVTALLEGAGGYHRWDWANNVMGPWVEVPERNLIIEGVGSLAPSVVRAARQHGPVLTM FT LFDGPEQMRRSRALARDPFYEPWWEMWAEQEARHFATVETPDVTRGYP" FT misc_feature 927031..927054 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 927733..929322 FT /transl_table=11 FT /locus_tag="DIP0956" FT /product="Putative peptide transport system secreted FT protein" FT /note="Similar to Corynebacterium glutamicum ABC-type FT transporter, periplasmic component CGL1990 SWALL:Q8NP35 FT (EMBL:AP005280) (534 aa) fasta scores: E(): 7.8e-143, FT 66.79% id in 533 aa, and to Mycobacterium tuberculosis FT putative peptide transport system secreted peptide-binding FT protein Rv3666c or MTV025.014c or MT3767 SWALL:O69634 FT (EMBL:AL022121) (541 aa) fasta scores: E(): 6.8e-75, 49.06% FT id in 534 aa, and to Bacillus subtilis dipeptide-binding FT protein precursor DppE or DciAE SWALL:DPPE_BACSU FT (SWALL:P26906) (543 aa) fasta scores: E(): 1.2e-18, 24.49% FT id in 539 aa" FT /protein_id="CAE49475.1" FT /translation="MTLKKTLAVGMTAALALGLTACSSDPSSGSAGGAGDNYVLANGSE FT PQNPLIPANTNEVGGGRVVDIIYGGLVYYDTEGKAHNEQAESIELEGDRIYKITLKDGL FT KFSDGTPIKAENFVKTWNYAVANDQLNASFFEGIKGFKEGVKELEGLKVVDDKTFTVEL FT DQPESDFPSRLGYSAFFALPDIAFDDMAAFGENPVSSGPYKLAEWNHNESLTIVPNEEY FT QGDRKAKNDGVKFVFYASQDAAYSDLLAGNLDVLDQVPDSAFATYKDELGDRAVNQPAA FT VFQSFTIPEKLEHFSGEEGALRRAAISHAINREEITKTIFQDTRTPAKDFSSPVVDGYK FT EGLKGSEVVKFDSAKAKELWAQADKISKFTGEFTIAYNSDGGHQSWVDAVANQLKNNLG FT IAASGKPYPDFKSLRDEVTNHTITGAFRTGWQGDYPLLGNFLQPLYATNASSNDGQYSN FT PAFDAKLEEAAGAKSVEEGLKLYQEAEEILFKDLPAIPLWYANVNGGSSDKVSNVTFNW FT KSVAAYEQITKG" FT misc_feature 927763..927831 FT /note="Signal peptide predicted for DIP0956 by SignalP 2.0 FT HMM (Signal peptide probability 0.907) with cleavage site FT probability 0.321 between residues 23 and 24" FT misc_feature 927763..929316 FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding proteins, family 5" FT misc_feature 927985..928050 FT /note="ScanRegExp hit to PS01040, Bacterial extracellular FT solute-binding proteins, family 5 signature." FT CDS 929413..930339 FT /transl_table=11 FT /locus_tag="DIP0957" FT /product="Putative peptide transport system membrane FT protein" FT /note="Similar to Mycobacterium tuberculosis putative FT peptide transport system permease Rv3665c or MTV025.013c FT TR:O69633 (EMBL:AL022121) (308 aa) fasta scores: E(): FT 4.9e-69, 63.48% id in 304 aa, and to Bacillus subtilis FT oligopeptide transport system permease protein OppB or FT Spo0KB SW:OPPB_BACSU (P24138) (311 aa) fasta scores: E(): FT 1.8e-37, 37.33% id in 308 aa, and to Corynebacterium FT glutamicum ABC-type transporter, permease components FT CGL1991 SWALL:Q8NP34 (EMBL:AP005280) (308 aa) fasta scores: FT E(): 1.5e-95, 84.09% id in 308 aa" FT /protein_id="CAE49476.1" FT /translation="MLRYIGRRLLQMIPVFFGATLLLYALVFLMPGDPVAALGGDRGLT FT EAARARISAEYNLDKPFLVQYLLYIKGIFQLDFGTTFSGRPVAEAMAHAFPVTIKLAVM FT ALIFEAVFGVIFGVIAGMRRGGIFDSTVLVLSLLVIAVPSFVIGFVFQFFVGVKWGLLP FT VTVGSNVSVKSLLMPAIVLGALSFAYVVRLTRQSVSENLTADYVRTARAKGLKGSTVTM FT RHVLRNSLIPVATYLGADLGALMAGAIVTEGIFGINGVGGTMYHAILKGEPTTVVSFTT FT VLVIVYIIANLVVDLIYALLDPRIRYA" FT misc_feature 929413..929523 FT /note="Signal peptide predicted for DIP0957 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.731 between residues 37 and 38" FT misc_feature order(929449..929508,929701..929769,929806..929874, FT 929932..929985,930097..930165,930247..930315) FT /note="6 probable transmembrane helices predicted for FT DIP0957 by TMHMM2.0" FT misc_feature 930004..930219 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT CDS 930332..931285 FT /transl_table=11 FT /locus_tag="DIP0958" FT /product="Putative peptide transport system membrane FT protein" FT /note="Similar to Streptomyces coelicolor putative peptide FT transport system integral membrane protein SC9E12.04 FT TR:Q9F351 (EMBL:AL391751) (305 aa) fasta scores: E(): FT 1.2e-56, 50.86% id in 289 aa, and to Bacillus subtilis FT oligopeptide transport system permease protein OppC or FT Spo0KC SW:OPPC_BACSU (P24139) (305 aa) fasta scores: E(): FT 5.5e-35, 36.86% id in 293 aa, and to Corynebacterium FT glutamicum ABC-type transporter, permease components FT CGL1992 SWALL:Q8NP33 (EMBL:AP005280) (333 aa) fasta scores: FT E(): 2.4e-98, 80.32% id in 310 aa" FT /protein_id="CAE49477.1" FT /translation="MHNNNFSRRGQEHFVSSVDETGLGAVDAVADESAPTSMWGEAWTY FT LRRRPLFWVSAALIFLALLMAIVPQLFTSTDPQFCELGKSLAKPAPGHPFGFDRQGCDI FT YSRMIYGARASVAVGVLTTIAVVLIGTAIGSAAGYIGGFLDTLLSRLTDIFFAVPLVLA FT AIVVMQMFKESRSIITVVVVLALFGWTNIARITRGAVLSTKNEEFVTAARAVGASKWRI FT LTTHVLPNSAAPIIVYATVALGTFIVAEATLSFLGIGLPPSIVSWGGDIAKAQASLRTQ FT PMVLFYPAVALGLTVLSFIMMGDAVRDALDPKSRKR" FT misc_feature order(930482..930550,930689..930757,930791..930844, FT 930857..930916,931010..931078,931181..931249) FT /note="6 probable transmembrane helices predicted for FT DIP0958 by TMHMM2.0" FT misc_feature 930929..931150 FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT CDS 931288..932970 FT /transl_table=11 FT /locus_tag="DIP0959" FT /product="Putative peptide ABC transport system ATP-binding FT protein" FT /note="Similar in its full length to Mycobacterium FT tuberculosis putative peptide ABC transporter ATP-binding FT protein Rv3663c or MTV025.011c TR:O69631 (EMBL:AL022121) FT (548 aa) fasta scores: E(): 4.5e-100, 58.27% id in 544 aa, FT and N-terminal region and C-termianl region both similar to FT Bacillus subtilis oligopeptide transport ATP-binding FT protein OppD or Spo0KD SW:OPPD_BACSU (P24136) (358 aa) FT fasta scores: E(): 3.1e-38, 46.56% id in 262 aa" FT /protein_id="CAE49478.1" FT /translation="MSEKKQQPLLEMRDVRIAFTSTTGTVEAVRGIDLTIYPGQSVAIV FT GESGSGKSTTAMSIIGLLPGTGKVTDGQIIFDGQDITKYSEKQMQELRGSHIGLVPQDP FT MSNLNPVWRIGTQVKESLKANNVVPGSQMDERVTQLLEEAGLPDAARRAKQYPHEFSGG FT MRQRALIGIGLAARPKLLIADEPTSALDVTVQKRILDHLENLTHELGTAVLFITHDLGL FT AAERAEHLVVMHRGRIVESGPSLDILRNPQHPYTRRLVKAAPSLASARIQSAQEKGVES FT SEILATEKKTDEEIIRVENLTKIFNVRGQRGDKAELKAVDDVSFSLKKGTTLALVGESG FT SGKSTVANMVLNLIDPTTGKVYYKGTDLSTLGKKELFDMRRKLQVVFQNPYGSLDPMYS FT IFRCIEEPLLVHKVGSRKEREKRVAQLLDMVAMPRSAMRRYPNELSGGQRQRIAVARAL FT ALNPEVIVLDEAVSALDVLVQNQILQLLADLQQELDLSYLFITHDLAVVRQTADQVVVM FT QKGRVVEQGTTDELFLNAREDYTRDLINSVPGLGVELGTGENL" FT misc_feature 931399..931998 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 931402..931995 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 931408..931476 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 931423..931446 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 931765..931809 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 931765..931983 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 932272..932850 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 932275..932847 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 932281..932358 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 932296..932319 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 932617..932661 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 932617..932835 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 932968..937217 FT /note="Low G+C content region (43.62%)" FT CDS 933397..933699 FT /transl_table=11 FT /locus_tag="DIP0960" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49479.1" FT /translation="MRTGFITRSWNDRNYDGYNTEITAANCLNNPHGSPGRVEFTLKKK FT IPVLPDHDLGTRILNGCYREWDRGNWGRVAAGDYYAVVGTFDWNRLTINWLKVGY" FT CDS 933702..934397 FT /transl_table=11 FT /locus_tag="DIP0961" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Bacillus subtilis homologous to many FT ATP-binding transport proteins YxlF TR:P94374 (EMBL:D83026) FT (295 aa) fasta scores: E(): 6.4e-12, 31.22% id in 221 aa, FT and to Escherichia coli, and putative aliphatic sulfonates FT transport ATP-binding protein SsuB or B0933 or Z1281 or FT ECS1016 SW:SSUB_ECOLI (P38053) (255 aa) fasta scores: E(): FT 3.3e-08, 31.25% id in 208 aa" FT /protein_id="CAE49480.1" FT /translation="MLELQNVKVRRSGKLLLDVPSLKIDSRATLLLGVNGAGKSTLLSI FT LAGRLAPSAGRVNGSKSVISVEQQFKPIIGFTCVEYCAYVGWLGGQAWSVARQKASYWL FT EFVGIEHLMHQRCEKLSGGERSRLAIATALNSGADMLLLDEPSAALDPVSKQAISDLYC FT QIVEYGQSLLVSTHDSADLKFPFERVIVLDAGQVRFDGSCAEFQDLSLQQGDSPAHILS FT KAFKKRERR" FT misc_feature 933774..934289 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 933777..934286 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 933783..933860 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 933798..933821 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 934059..934103 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 934059..934274 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 934399..935547 FT /transl_table=11 FT /locus_tag="DIP0962" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49481.1" FT /translation="MWKFPRSHWIKRPSLWCCIGALLVCFLPLSQWTVVAYTPSILANA FT TIVFYIIIPAMAVAVAWEASRFRPVIGVAANSVRKILLDRLLWFALFPPLAYTASVIFL FT AGNLTALNSSIFIGMLGYSCILGIGWVVVGTVIGFSLRPAISVGLAGVLSYGWYALLPS FT MIAPGAIRRLSGDFLACCSLDADLDRRAVVIAGGVILGVSMLSIALFSLIKMQSSKKLP FT VMAGCAGVALIVISAVANHSLTDNGLIARNRADLVCIDGVCAWPEIPKDSIALNARARE FT KFAEIIPNEWSEYATAPVVWGETDDQSSIEFSGQRTLPGVLGDYVDYVGSIELARTGVE FT ICGTPLEKIGIVRSGLAWNPEELVSIEAVEHRLEHSLCPTRL" FT misc_feature 934399..934527 FT /note="Signal peptide predicted for DIP0962 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.318 between residues 43 and 44" FT misc_feature order(934435..934503,934516..934584,934654..934713, FT 934741..934809,934828..934896,934972..935040, FT 935059..935127) FT /note="7 probable transmembrane helices predicted for FT DIP0962 by TMHMM2.0" FT CDS 935552..936139 FT /transl_table=11 FT /locus_tag="DIP0963" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49482.1" FT /translation="MQSRFGLYCRAHRVIQATSFILILLAIVVPAGHMIVYIPWLNGTN FT LVTINGVAGIAYGATPVMLFRNEGTRLELFSLFPWRLINGVILLILWIVPWVMCGIFRP FT ASQFAYIATCSIALAVVVGQFLRSDTLILFIIGQFLLQTVMWQSVRNLPIRFIMFAVNQ FT PPLKVAFIISVSLFVISLIWVRDPLKTNKLGQ" FT misc_feature 935552..935725 FT /note="Signal peptide predicted for DIP0963 by SignalP 2.0 FT HMM (Signal peptide probability 0.637) with cleavage site FT probability 0.441 between residues 58 and 59" FT misc_feature order(935606..935674,935687..935746,935780..935848, FT 935876..935929,935942..936001,936044..936103) FT /note="6 probable transmembrane helices predicted for FT DIP0963 by TMHMM2.0" FT stem_loop 936897..936946 FT /note="Score 50: 18/19 (94%) matches, 0 gaps" FT CDS complement(937248..937976) FT /transl_table=11 FT /locus_tag="DIP0964" FT /product="Putative protease" FT /note="Similar to Streptomyces coelicolor putative FT hydrolase SCBAC14E8.01c TR:Q9ADJ8 (EMBL:AL590435) (228 aa) FT fasta scores: E(): 0.0013, 30.47% id in 233 aa" FT /protein_id="CAE49483.1" FT /translation="MKKLRTLAVTLTAIAASTMATMPAQAVISPTPSHQVSLAYVSFDN FT MQCTGTLVSPTTVLTARHCLNGGLGHVRLGADHFTAVRAVAHPQADLAVLHLDRPAPIA FT PSAISGRHTQPGNRFGVAGYGSTFPGIPMAAAATMQRRVTDVPSPDRQAVMIENHISQG FT VLRPGDSGGPLLEGNHVVGVLSMSSASGRVGWYIPTAEHADWIAAAAGIPAPGSVDKPA FT PLVDATAFPTQEPSLASLSS" FT misc_feature complement(937344..937937) FT /note="ProfileScan hit to PS50240, Serine proteases, FT trypsin domain profile." FT misc_feature complement(937359..937877) FT /note="HMMPfam hit to PF00089, Trypsin" FT misc_feature complement(937359..937901) FT /note="HMMSmart hit to SM00020, Trypsin-like serine FT protease" FT misc_feature complement(937452..937490) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(937452..937502) FT /note="FPrintScan hit to PR00839, V8 serine protease family FT signature" FT misc_feature complement(937674..937718) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(937782..937835) FT /note="FPrintScan hit to PR00839, V8 serine protease family FT signature" FT misc_feature complement(937785..937832) FT /note="FPrintScan hit to PR00722, Chymotrypsin serine FT protease family (S1) signature" FT misc_feature complement(937890..937955) FT /note="1 probable transmembrane helix predicted for DIP0964 FT by TMHMM2.0" FT misc_feature complement(937899..937976) FT /note="Signal peptide predicted for DIP0964 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.688 between residues 26 and 27" FT CDS complement(937977..938321) FT /transl_table=11 FT /gene="arsC" FT /gene_synonym="arsG" FT /locus_tag="DIP0965" FT /product="arsenate reductase" FT /EC_number="1.20.4.1" FT /note="Similar to Escherichia coli arsenate reductase ArsC FT or ArsG or B3503 SW:ARSC_ECOLI (P37311) (141 aa) fasta FT scores: E(): 1.8e-14, 48.24% id in 114 aa" FT /protein_id="CAE49484.1" FT /translation="MITVYHNPRCSTSRKALEYIEQHSDDEVTIIRYLDAPPSEQELRT FT LLADAHLSPHDAIRTKEAEYKELGLSSTTPESELIKAMVTHPRLIQRPIVATCKGTRIA FT RPTEILKEIL" FT CDS complement(938318..938851) FT /transl_table=11 FT /locus_tag="DIP0966" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 16.6 kDa protein MT1668 TR:AAK45938 FT (EMBL:AE007030) (147 aa) fasta scores: E(): 1.1e-16, 39.43% FT id in 142 aa" FT /protein_id="CAE49485.1" FT /translation="MTDLHPVKEETFNITAMNNIDPKGFHRDVDTYSETEFGLYMARGA FT NHPRFGYLESWLLPEINLRANIFHFRDGIDEHQDFYFDIAEISHDGHTWHTRDLYVDLI FT SVVGEPVRVDDTDELAAATSAGLITAEDAEKAIDATLLAVDGITRHNDDPMAWLAAMGY FT PLTWAKNITLKEAE" FT CDS complement(938855..939541) FT /transl_table=11 FT /locus_tag="DIP0967" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 36.6 kDa protein MT1193 TR:AAK45450 FT (EMBL:AE006997) (371 aa) fasta scores: E(): 7.8e-15, 33.91% FT id in 230 aa" FT /protein_id="CAE49486.1" FT /translation="MGRPATTALAATLAALLPLSVTTTPIASAQSSQQVTSTSSTSPLF FT PLDELGRPKPEILNAVRKFAGTLPPPLQTPLLAAVAFYEGTGTPTVALPPQAPRFFQGF FT WPSISPRCIKGDQSSVGSVIAVPGPTSIPAPGAGAGQSAFVFTALGTAPATDTHTMTVH FT WFNLSTLRGGAAPLGNNGINPDGPATISGVANTGRGRVIAVAAGTVGTGDGPCTFLPTT FT MFFEVK" FT misc_feature complement(939455..939541) FT /note="Signal peptide predicted for DIP0967 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.779 between residues 29 and 30" FT CDS 939899..941809 FT /transl_table=11 FT /locus_tag="DIP0969" FT /product="Putative GTP-binding elongation factor" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT GTP-binding elongation factor family protein MT1202 FT TR:AAK45459 (EMBL:AE006997) (628 aa) fasta scores: E(): FT 6.7e-148, 67.88% id in 629 aa, and to Escherichia coli FT GTP-binding protein TypA/BipA TypA or BipA or B3871 FT SW:TYPA_ECOLI (P32132) (591 aa) fasta scores: E(): 3.3e-58, FT 46.49% id in 613 aa" FT /protein_id="CAE49487.1" FT /translation="MTRPEFRNVAIVAHVDHGKTTLVDAMLRQSGAFDEHAELVDRVMD FT SGDLEKEKGITILAKNTAVRRRGAGKDGNDVVINVIDTPGHADFGGEVERALSMVDGVV FT LLVDASEGPLPQTRFVLGKALAAKMPVVILVNKTDRPDARIDEVVEESQDLLLELASAL FT DDPEAAEAAEQLLDLPVLYASGREGKASTVNPGNGNVPDAEDLQALFDVIYEVMPEPTV FT NVDGPLQAHVTNLDSSSFLGRIGLIRVHSGSLKKGQQVAWIHYDEEGNQHTKTAKIAEL FT LRTVGVTRVPADEVVAGDIAAISGIDSIMIGDTLADLEHPVALPRITVDEPAISMTIGV FT NTSPLAGRGGGDKLTARVVKARLEQELIGNVSLRVLPTERPDAWEVQGRGEMALSVLVE FT TMRREGFELTVGKPQVVTQTVDGKLFEPYEHMVIDIPSEYQGNVTQLMAARKGQMLSMD FT NISDEWVRMEYKVPARGLISFRTMFMTETRGTGIANSYSEGLDEWAGEIKGRATGSLVA FT DRSGQITAYALQQLADRGNFFVEPGTEAYEGMVVGANNRDEDMDVNITREKKLTNMRSA FT TADATVTLAKARSLSLDEAMEFCGQDECVEVTPDVLRVRKVILNATERGRARAREKARN FT K" FT misc_feature 939908..940561 FT /note="HMMPfam hit to PF00009, Elongation factor Tu family" FT misc_feature 939920..939961 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 939935..939958 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 940031..940078 FT /note="ScanRegExp hit to PS00301, GTP-binding elongation FT factors signature." FT misc_feature 940052..940078 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 940133..940165 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 940181..940216 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 940289..940318 FT /note="FPrintScan hit to PR00315, GTP-binding elongation FT factor signature" FT misc_feature 940586..940846 FT /note="HMMPfam hit to PF03144," FT CDS 941820..943349 FT /transl_table=11 FT /locus_tag="DIP0970" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 66.1 kDa protein LpqW or Rv1166 or MTV005.02 TR:O50422 FT (EMBL:AL010186) (635 aa) fasta scores: E(): 4.6e-29, 32.02% FT id in 381 aa" FT /protein_id="CAE49488.1" FT /translation="MSNKHRILVPLLATALVSCSANPGPAPVEKEQPTSTTTTPAKKAK FT KTSEIAVGIDPINGGLNPHMLADDSTFVRSLATLVLPSSYIGGELNSDLLESVDDVPPP FT SGSKAVQTIRYKIRPEAQWSDATPITVSDFEYLWHAIVETPGTLGAPYYRAIGQIRSAD FT GGRTVDVDLAQPLHDWRVLFNNLLPSHVLRGGDSDFSTVLADGIPASAGRYSFAGVDRQ FT RGIVTLNRNDRFWGEKPATVENIKFREVTDIAQGRELLRTGQIKFLDITPTEVAREAFE FT LMPNTQVRTTTTSLNLQLIANTHLTLEQRADLQSLIDVHTVARIAMGRSTDLGVGDQPY FT EPHADHLMSLGRPVRIGVDPSDPEAQMAARVLSDVLARKSVKTQLVETDTTDLIGSKLA FT ASAVDAIITWSAANAMEKLQCAPTPTNVNIALWCDPDTDQHINDVLSGAMTREDFNSYA FT ADVDHQQHLTTVIAPDTRLLVLGTQPEGKGTKFTNWPMGLTSIGQWSINEE" FT misc_feature 941820..941909 FT /note="Signal peptide predicted for DIP0970 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.397 between residues 30 and 31" FT CDS 943349..944230 FT /transl_table=11 FT /locus_tag="DIP0971" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 31.7 kDa protein Rv1170 or MTV005.06 TR:O50426 FT (EMBL:AL010186) (303 aa) fasta scores: E(): 3.9e-27, 40.34% FT id in 290 aa" FT /protein_id="CAE49489.1" FT /translation="MRDLIGFKAVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLG FT EEGEVIGEPYQGLTNKNADQLGGFRIHELHKSLSLLGVRGEFLGGAGCWRDSGMIGDPA FT NEHPRAFISSGDKSIEQLTEIFERLQPDLVITYGPDGGYGHPDHIRAHNITHTVAENMD FT IPRILWAVTPRTELEQGMAAITTLPSGWRRALPGEVACVDHVDLTIALDDHAFAAKAAA FT MRAHATQLWLADATISDVNPHAAIAGVADPKAAPLVFALSNLIAQPLLDIECYQLGGGT FT PLTSNDPTEGIR" FT misc_feature 943349..943360 FT /note="ScanRegExp hit to PS00228, Tubulin-beta mRNA FT autoregulation signal." FT misc_feature 943352..944104 FT /note="HMMPfam hit to PF02585, Uncharacterized LmbE-like FT protein, COG2120" FT CDS 944257..944637 FT /transl_table=11 FT /locus_tag="DIP0972" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49490.1" FT /translation="MADQSYVYQGFSRAEAAWGIFWITLGALTSLLLEVVYLDTRIDGF FT PVPYTIVVAFLFNRVLTKTSLLWSRTPAIALIPIFAWIAGFVVLTMTPGITGDQIVGQN FT LRAILLLGAGVAGGSWPLLSRR" FT misc_feature order(944302..944370,944380..944439,944473..944541, FT 944569..944628) FT /note="4 probable transmembrane helices predicted for FT DIP0972 by TMHMM2.0" FT CDS 944687..945004 FT /transl_table=11 FT /gene="fdxA" FT /locus_tag="DIP0973" FT /product="ferredoxin" FT /note="Highly similar to Saccharopolyspora erythraea FT ferredoxin FdxA SW:FER_SACER (P24496) (105 aa) fasta FT scores: E(): 9.3e-32, 76.69% id in 103 aa" FT /protein_id="CAE49491.1" FT /translation="MTYTIAQPCVDVMDRACVEECPVDCIYEGKRSLYIHPDECVDCGA FT CEPACPVEAIFYEDDVPDEWIDYNDANAAFFDSLGSPGGAAKLGPQDFDADLVASLPPQ FT V" FT misc_feature 944711..944743 FT /note="FPrintScan hit to PR00354, 7Fe ferredoxin signature" FT misc_feature 944741..944773 FT /note="FPrintScan hit to PR00354, 7Fe ferredoxin signature" FT misc_feature 944783..944854 FT /note="HMMPfam hit to PF00037, 4Fe-4S binding domain" FT misc_feature 944789..944842 FT /note="FPrintScan hit to PR00354, 7Fe ferredoxin signature" FT misc_feature 944804..944839 FT /note="ScanRegExp hit to PS00198, 4Fe-4S ferredoxins, FT iron-sulfur binding region signature." FT CDS 945034..946134 FT /transl_table=11 FT /locus_tag="DIP0974" FT /product="Putative aminotransferase" FT /note="Similar to Mycobacterium leprae possible FT aminotransferase ML1488 TR:Q9CBX8 (EMBL:AL583922) (367 aa) FT fasta scores: E(): 3.9e-81, 60.44% id in 364 aa. Possible FT alternative transcription start in the second residue" FT /protein_id="CAE49492.1" FT /translation="MMTRLPLGATLPDFPWDSLADAKKTASSHPDGLINLSVGSPVDEV FT APGIRLALAEAAAAPGYPQTIGTQELRAAIVDSLQRRYHATSLGGVLPVVGTKEAIALL FT PTLLGIRGTVVIPEVAYPTYEVGALMAGATPLRCDAPHELPNDDIDLVFINSPSNPTGR FT VASVEELRSIVAWAQANDVIVASDECYLGLAWDGEAVSILDPRVNDGNLSNLLAIHSLS FT KSSNLASYRAGFLAGDEALIAELTEIRKHSGLMVPGPIQAAMVEALRDDDQEALQKLRY FT ARRRALLMRALIDAGFTVEHSEAGLYLWATRGENCRATVDWFASHGILVAPGDFYGPDA FT HNFVRVALTTTDDNAEKVAARLQKGN" FT misc_feature 945277..946131 FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II" FT CDS 946181..946912 FT /transl_table=11 FT /locus_tag="DIP0975" FT /product="Putative RNA pseudouridylate synthase family FT protein" FT /note="Similar to, although shorter than, Mycobacterium FT tuberculosis CDC1551 RNA pseudouridylate synthase family FT protein MT3399 TR:AAK47742 (EMBL:AE007148) (305 aa) fasta FT scores: E(): 3.5e-23, 37.33% id in 233 aa, and similar to FT Escherichia coli ribosomal large subunit pseudouridine FT synthase A RluR or B0058 SW:RLUA_ECOLI (P39219) (218 aa) FT fasta scores: E(): 1.8e-07, 26.76% id in 213 aa" FT /protein_id="CAE49493.1" FT /translation="MAASAGDSPFSPGTPLAPGTLLEKPIPAWFWLGVPEEPSIPFDYT FT VIARTPDLLVVDKPCFLPATSNGRIVAETVQTRARIRENNPHIVPLHRLDRLTTGILLC FT STNPETRATYQQLFQHRAITKRYIAHVAGPIPFGPQWTEIALGMRKMGPRVVVDPTGTL FT TRTRVRRLEEGVVELQPATGHTHQLRVLLAWVGCPIIGDDTYPVDRRRRIYDFSKKLEL FT YATSLEFVDPVSNVTRRFARG" FT misc_feature 946307..946795 FT /note="BlastProDom hit to PD001819, PD001819" FT misc_feature 946334..946762 FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase" FT misc_feature 946451..946495 FT /note="ScanRegExp hit to PS01129, Rlu family of FT pseudouridine synthase signature." FT CDS 946947..947504 FT /transl_table=11 FT /locus_tag="DIP0976" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49494.1" FT /translation="MTNRATDSVLGNLRQFIMFGLVGGSGTIVNLLVAVLSKKIAWWTA FT GISEHEPFFNLFGTAFHIRWYHVFMTIAFVVANTWNYQLNRMWTFKQAATLSWWRGFFL FT FFITGLGAFVVSQITLTLLMNVESPLSLPTEIFDDSSGLRTKFYWANAISILVAMPVNF FT VINKLWTFRNPKVQVVAAADPH" FT misc_feature order(946983..947051,947133..947192,947250..947318, FT 947385..947444) FT /note="4 probable transmembrane helices predicted for FT DIP0976 by TMHMM2.0" FT CDS complement(947511..948695) FT /transl_table=11 FT /locus_tag="DIP0977" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49495.1" FT /translation="MRSMNTHAVLQFLSGNGIAILQFFHQLILQGKTQDDLTRDYALDR FT AWVGSVMKLAKELFDPRPSPSRDECISVAKELGLGIEVLKAINPALGRLNKKASMTKDD FT LRLRLYREARGMTPAEAKAHANTRVVALNDACGATPRKPAVRISKSTDAAGQRHIHASL FT DDATASAVAEKLHAGARWLTKKTPSLSYSQAMAEIFAIAILDSPALGGRKRREGLILLP FT ADGYTHRGNGMLATTDGSLIPAHKLAEHLLEEYGYAMLYALNDEGVPEPVDLYRTKRYA FT NDKQRLMITADQLTCSHPDCHRLANNSHIHHCTAWERGGETNVKNLVAACATHNRRNDD FT DPERHKNGYFRRMPHSGCAGFQPADPSLPPRRTRVPFAAYSARVWACDHFGVTV" FT misc_feature complement(947688..947846) FT /note="HMMSmart hit to SM00507, HNH nucleases" FT misc_feature complement(948662..953601) FT /note="Possible duplication region" FT CDS complement(948776..950188) FT /transl_table=11 FT /gene="aroP1" FT /locus_tag="DIP0978" FT /product="Aromatic amino acid transport protein" FT /note="Similar to Corynebacterium glutamicum aromatic amino FT acid transport protein AroP SW:AROP_CORGL (Q46065) (463 aa) FT fasta scores: E(): 1.1e-91, 56.16% id in 454 aa. Possible FT duplication of DIP0980 (57.395% identity in 453 aa FT overlap)" FT /protein_id="CAE49496.1" FT /translation="MTEHTAPTLTKGLKVRHLTMMGLGSTIGAGLFLGTGVGIKAAGPA FT VLIAYIIAGFIAVMIMRMLGEMGSVVPASGSFSEYADAGIGHWAGFIQGWVYWLATVAV FT LGAEITGASGFVASWLGVSPWIPALVFVAFFGLVNLMRVRAFGEFEFWFAFIKVAVLVV FT FLIIGSLLVLGLLPNHDFVGLSNVRAEGFAPTGLGGIAAALLAVAFGFGGIEVVAIASA FT ESEDPQKSLVNAVRTTITRISIFYLGSVAIIVLLLPYSSLGKAKSAAESPFSQVLAMAN FT IPGVVGVIEVVIVLALLSAFNAQIYASSRMMMSLAERRQAPNIFARVDNRGVPLPAIVL FT SVVLSVIMVILNYVDTGWLLTFLLNAAGASLLTVWTFIAVSQLKLRRRLEALQGNLAVR FT MWAFPGLTIATLAILFGLAILMLSDAGARIELLSAIAMVAILFAISLIAVKQPFDKALL FT PREASYPQNSPS" FT misc_feature complement(948839..950164) FT /note="HMMPfam hit to PF00324, Amino acid permease" FT misc_feature complement(order(948842..948907,948923..948988, FT 949049..949114,949127..949192,949286..949351, FT 949412..949462,949526..949591,949670..949735, FT 949775..949840,949871..949936,949997..950062, FT 950075..950125)) FT /note="12 probable transmembrane helices predicted for FT DIP0978 by TMHMM2.0" FT misc_feature complement(949028..950149) FT /note="ProfileScan hit to PS50286, Permeases for amino FT acids and related compounds, family II." FT misc_feature complement(949040..950167) FT /note="ProfileScan hit to PS50285, Permeases for amino FT acids and related compounds, family I." FT misc_feature complement(949973..950065) FT /note="ScanRegExp hit to PS00218, Amino acid permeases FT signature." FT misc_feature complement(950066..950188) FT /note="Signal peptide predicted for DIP0978 by SignalP 2.0 FT HMM (Signal peptide probability 0.984) with cleavage site FT probability 0.954 between residues 41 and 42" FT CDS complement(950252..951226) FT /transl_table=11 FT /locus_tag="DIP0979" FT /product="Putative succinyltransferase" FT /EC_number="2.3.1.117" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT tetrahydrodipicolinate N-succinyltransferase, putative FT MT1239 TR:AAK45496 (EMBL:AE007001) (317 aa) fasta scores: FT E(): 1.4e-70, 66.35% id in 324 aa, and to Vibrio cholerae FT 2,3,4,5-tetrahydropyridine-2-carboxylate FT N-succinyltransferase VC2329 TR:Q9KPN7 (EMBL:AE004303) (343 FT aa) fasta scores: E(): 3e-53, 52.16% id in 347 aa. Similar FT also to DIP0981 (45.614% identity in 285 aa overlap)" FT /protein_id="CAE49497.1" FT /translation="MTSALATGLATITADGTVLDAWFPAPELTAVDTTGTTVLDGDDIP FT EHLRLLVGEDADRGVRRQAITTTIADLDAAPIDAYDAYLRLHLLSHRLVKPHGQNLDGI FT FGLLTNVVWTNHGPCEVKNFDITRAKLQARGPVTVYLVDKFPRMVDYVLPSGVRIGDAD FT RVRLGAHLAEGTTVMHEGFVNFNAGTLGNSMVEGRISAGVVVDDGSDVGGGASIMGTLS FT GGGKQVISLGKRCLLGANSGCGIPLGDDCVIEAGLYVTAGSKIIVRGAVAEATGLNDGD FT TTKALELAGANNILFRRNSISGAIEATAWKSQAVELNDALHAN" FT CDS complement(951237..952601) FT /transl_table=11 FT /gene="aroP2" FT /locus_tag="DIP0980" FT /product="Aromatic amino acid transport protein AroP" FT /note="Similar to Corynebacterium glutamicum aromatic amino FT acid transport protein AroP SW:AROP_CORGL (Q46065) (463 aa) FT fasta scores: E(): 6.2e-118, 74.27% id in 447 aa, and to FT Escherichia coli gaba permease GabP or B2663 SW:GABP_ECOLI FT (P25527) (466 aa) fasta scores: E(): 6.2e-59, 41.03% id in FT 446 aa. Possible duplication of DIP0978 (57.395% identity FT in 453 aa overlap)" FT /protein_id="CAE49498.1" FT /translation="MTQATTETELGTGLKTRHLTMMGLGSAIGAGLFLGTGVGIAAAGP FT AVLIAYVLAGIFVVFVMQMLGELAAARPASGSFSVYAEQAFGHWAGFSLGWLYWFMLTM FT VLGAEMTGAAAIMGQWFGIAPWIPALICVIFFAVVNLARVSGFGEFEFWFAFIKVAVII FT LFLVIGVLLIFGLLPNYDFVGTQHFLGDGFMPNGISGVATGLLAVAFAFGGIEIVTIAA FT AESEDPKTAIATAVRSVIWRISLFYLGSVLVICFLIPFSSIGGAKSAADSPFTIILGMA FT NIPGVVGFMEAVIVLALLSAFNAQIYATSRIVHSFAERGDAPKIFAATNPSGVPMPAVL FT LSMFFAFVSVGLQYWNPAGLLNFLLNAVGGCLIVIWVIIAFAYLKLHPELVRNGEITTV FT RMWGFPWLGWVTIAGFLGLTVLMLTDDASRSQITSVTVVFLLLIVVSFFTKKKSK" FT misc_feature complement(951252..952574) FT /note="HMMPfam hit to PF00324, Amino acid permease" FT misc_feature complement(order(951258..951314,951330..951395, FT 951459..951524,951537..951602,951696..951761, FT 951807..951872,951936..952001,952080..952145, FT 952185..952250,952281..952346,952395..952460, FT 952473..952538)) FT /note="12 probable transmembrane helices predicted for FT DIP0980 by TMHMM2.0" FT misc_feature complement(951438..952559) FT /note="ProfileScan hit to PS50286, Permeases for amino FT acids and related compounds, family II." FT misc_feature complement(951450..952577) FT /note="ProfileScan hit to PS50285, Permeases for amino FT acids and related compounds, family I." FT misc_feature complement(952233..952268) FT /note="ScanRegExp hit to PS00213, Lipocalin signature." FT misc_feature complement(952383..952475) FT /note="ScanRegExp hit to PS00218, Amino acid permeases FT signature." FT misc_feature complement(952473..952601) FT /note="Signal peptide predicted for DIP0980 by SignalP 2.0 FT HMM (Signal peptide probability 0.872) with cleavage site FT probability 0.362 between residues 43 and 44" FT CDS complement(952671..953582) FT /transl_table=11 FT /locus_tag="DIP0981" FT /product="Putative succinyltransferase" FT /EC_number="2.3.1.117" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT tetrahydrodipicolinate N-succinyltransferase, putative FT MT1239 TR:AAK45496 (EMBL:AE007001) (317 aa) fasta scores: FT E(): 3.2e-46, 46.53% id in 303 aa, and C-terminal region to FT Corynebacterium glutamicum tetrahydrodipicolinate FT succinylase DapD TR:O69283 (EMBL:AJ004934) (230 aa) fasta FT scores: E(): 1.6e-28, 45.2% id in 219 aa. Similar also to FT DIP0979 (45.614% identity in 285 aa overlap)" FT /protein_id="CAE49499.1" FT /translation="MSQFGATAIGIANIAMNGEVLDTWYPTPELVPASTSPSYSERLGA FT QDLPPKLLSLVRLDEDRLVEQVAVRTYIGDLDTPPIDAHDVFLRLHLLSHRLVRPLEIN FT MDNAMSILSRVVWTNKGPCLPENFENIRMSLRNRGLIHVYGIDRLPRMVDYVVPTGVEI FT TEAERVRLGAYLAEGTKVLREGYVSFNAGTLGAGRIEGRLYSGTVVGDNVDLGISASIV FT PDKPHAQLRVGANCVFGLGSAVMGINLGDNVRVGNNVVIDKETMVYFADRDITAAAAIL FT DGQSDWQIHAESGRPEPVVRPT" FT CDS 953662..954759 FT /transl_table=11 FT /gene="dapE" FT /locus_tag="DIP0982" FT /product="succinyl-diaminopimelate desuccinylase" FT /EC_number="3.5.1.18" FT /note="Similar to Corynebacterium glutamicum FT succinyl-diaminopimelate desuccinylase DapE SW:DAPE_CORGL FT (Q59284) (369 aa) fasta scores: E(): 1.2e-87, 61.11% id in FT 360 aa, and to Escherichia coli succinyl-diaminopimelate FT desuccinylase DapE or MsgB or B2472 SW:DAPE_ECOLI (P24176) FT (375 aa) fasta scores: E(): 3.8e-09, 28.53% id in 354 aa" FT /protein_id="CAE49500.1" FT /translation="MLDLTTNPIDLTRALVDIESPSHYEKNIADAIEQALHAIDNVEVL FT RHGNTLVARTHRGLGERVILAGHIDTVPIADNVPSHMEGDVMFGCGTVDMKSGMAVYLH FT AFATLANHPALAKDLTVVCYEGEEVASEYNGLGHVQAAHPDWLSGDLALLGEPSGAVIE FT AGCQGTIRLRVTAHGVRAHSARSWLGDNAMHKLAPVITNIAQYHAQEMLVDGCLYHEGL FT NIVHCESGVATNTIPDEAWMFVNFRFAPNRSVDEALAHMLEVLDLPEGVTYDIDDAVPG FT ARPGLDRPAAAALLEATGGKFRAKYGWTDVSRFSEIGVPAVNFGPGDPAYCHKKDEQCP FT VSMITEVSRTLVHYLTSTNSQTTGA" FT misc_feature 953695..954588 FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40" FT CDS 954767..955531 FT /transl_table=11 FT /locus_tag="DIP0983" FT /product="Conserved hypothetical protein" FT /note="Similar in its N-terminal region to Corynebacterium FT glutamicum ORF2 protein TR:Q46063 (EMBL:X81379) (211 aa) FT fasta scores: E(): 2.5e-63, 76.66% id in 210 aa, and to FT Streptomyces coelicolor hypothetical 27.5 kDa protein FT SCP8.03 TR:Q9FBL8 (EMBL:AL390975) (252 aa) fasta scores: FT E(): 7.5e-60, 64.08% id in 245 aa" FT /protein_id="CAE49501.1" FT /translation="MTTQPQRNERHLCGPVLVRGKKNQSPSTYDQRLLELPADHDWLHA FT DPWRVLRIQSEFVAGFDALSQLPPAVTVFGSARVAPNHPYYDQGVCLGEGLVRAGYAVI FT TGGGPGLMEAANKGAFDADGYSVGLGIELPHEQGINDYVDLGLHFRYFFARKTMFLKYS FT QAFVCLPGGMGTLDELFEVLCMVQTGKVTNFPIVLLGTSFWGGLVDWIKQRLVGEGMIS FT EEDLSLFLVTDSVDEAVEFIRQAHRRMMHVDD" FT CDS 955524..956381 FT /transl_table=11 FT /gene="folP" FT /locus_tag="DIP0984" FT /product="dihydropteroate synthase" FT /EC_number="2.5.1.15" FT /note="Similar to Mycobacterium leprae dihydropteroate FT synthase FolP1 or FolP or ML0224 and FolP2 or ML1063 FT SW:DHPS_MYCLE (P46812) (291 aa) fasta scores: E(): 4.8e-57, FT 58.69% id in 276 aa, and to Escherichia coli FT dihydropteroate synthase FolP or DhpS or B3177 FT SW:DHPS_ECOLI (P26282) (282 aa) fasta scores: E(): 1.2e-25, FT 35.79% id in 257 aa" FT /protein_id="CAE49502.1" FT /translation="MTRSAFQHDPECATVMAIVNRTPDSFYDHGATHALADAITRASAV FT IAQGAGIVDIGGVKAGPGPYVSPSEEIERVVPVIDAVHRAHPEITISVDTWRAEVADVA FT IRAGASLVNDTWAGHDPELAEVAGHYRVGYVCSHTGGVAPRTRPHRVRFDDIVASVIEE FT TTAQAERAVRLGVPEDRILIDPTHDFGKNTFHGLELLRRIDEIVATGWPVLMALSNKDF FT VGETLARSVDQRVAGTLAATAWAAAHGVAAFRSHQVAETVDVIRMTAAIQGRVPPLATT FT RGLV" FT misc_feature 955566..955613 FT /note="ScanRegExp hit to PS00792, Dihydropteroate synthase FT signature 1." FT misc_feature 955569..956333 FT /note="HMMPfam hit to PF00809, Dihydropteroate synthase" FT misc_feature 955668..955709 FT /note="ScanRegExp hit to PS00793, Dihydropteroate synthase FT signature 2." FT CDS 956378..957127 FT /transl_table=11 FT /locus_tag="DIP0985" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 34.0 FT kDa protein SCD95A.25c TR:Q9KXU9 (EMBL:AL357432) (314 aa) FT fasta scores: E(): 2.9e-29, 47.67% id in 258 aa, and to FT Methanothermobacter thermautotrophicus dolichyl-phosphate FT mannose synthase related protein MTH374 TR:O26474 FT (EMBL:AE000823) (291 aa) fasta scores: E(): 1.4e-08, 31.89% FT id in 254 aa" FT /protein_id="CAE49503.1" FT /translation="MNVSVVIPALNEEATVADVVALSRRGSDEVIVIDSDSTDATAARA FT KAAGASVVNWRDVVSLPPIPGKGEALWRGVAAARGDVVVFLDADLTEISPTIVEDLARP FT FIDDSVMLAKAAYTRGDASGGGGRVTELTARPLLEAFFPELGFVRQPLGGEYAIRRSAA FT LDLPFVGGYGVEVGLLIDVFRCFGAASIVEVEAGHRGHRHRPLRELAPMARVVASTILQ FT RAGVASGLDGVGQRPAISSLESGVGKV" FT misc_feature 956381..956644 FT /note="ProfileScan hit to PS50167, General FT Glycosyltransferase domain." FT misc_feature 956387..956938 FT /note="HMMPfam hit to PF00535, Glycosyl transferase" FT CDS 957132..957410 FT /transl_table=11 FT /locus_tag="DIP0986" FT /product="Putative secreted protein" FT /note="Similar to, although shorter than, Streptomyces FT coelicolor putative secreted protein SCP8.05 TR:Q9FBL6 FT (EMBL:AL390975) (119 aa) fasta scores: E(): 1.1, 32.09% id FT in 81 aa" FT /protein_id="CAE49504.1" FT /translation="MLWWIVLLLVMMVAVVVLTFGFGSVFGRGDGVVLPEVDQLMVSNE FT RAVRRGRVDDVRFDSALWGYNQQQVDQVIAALESEIDQLKGQTRGFK" FT misc_feature 957132..957215 FT /note="Signal peptide predicted for DIP0986 by SignalP 2.0 FT HMM (Signal peptide probability 0.921) with cleavage site FT probability 0.370 between residues 28 and 29" FT misc_feature 957141..957209 FT /note="1 probable transmembrane helix predicted for DIP0986 FT by TMHMM2.0" FT CDS 957488..957664 FT /transl_table=11 FT /locus_tag="DIP0987" FT /product="Conserved hypothetical protein" FT /note="Similar to C-terminal region of Streptomyces FT coelicolor conserved hypothetical protein SCP8.08 TR:Q9FBL3 FT (EMBL:AL390975) (74 aa) fasta scores: E(): 8.5e-11, 60.37% FT id in 53 aa" FT /protein_id="CAE49505.1" FT /translation="MICMAAMKPRTGNGPMEAVFESRKIVMRIPTDGGGRLVIEMNKEE FT AAELGALLTEVSQ" FT CDS 957691..958560 FT /transl_table=11 FT /locus_tag="DIP0988" FT /product="Putative macrolide resistance protein" FT /note="Similar to Micromonospora griseorubida FT mycinamicin-resistance protein MyrA SW:MYRA_MICGR (P37000) FT (295 aa) fasta scores: E(): 2.8e-31, 39.51% id in 286 aa, FT and to Streptomyces fradiae tylosin resistance protein TlrB FT TR:Q9ZHQ6 (EMBL:AF055922) (280 aa) fasta scores: E(): FT 2.4e-30, 37.82% id in 267 aa" FT /protein_id="CAE49506.1" FT /translation="MLSHVVDVLADPIDGSALTLVDDNRRLVSESGHSFDIARQGYVTL FT AGGAGIRYVGDDSSMIHARETFLSGGHFAPFVEAVSNSVHLALDEANVPDDASPVICEV FT GAGTGYYLAHALDDIENSRGIGIDVSVPAAKMLSKCHPRVGAVVADAWSRLPLRDASID FT AITVVFAPRNASEFARVLKPGGQVIVLTADAGHLEELREPLGIIGVEKGKVQRMIDQAA FT GNLVPVSDPEPIEFTMHLDQDSIASQIGMSPSARHIHPDVLGERIATLPSVMDVTARAM FT ITRFAKID" FT misc_feature 957991..958266 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT stem_loop 958566..958614 FT /note="Score 58: 22/24 (91%) matches, 0 gaps" FT CDS complement(958618..960030) FT /transl_table=11 FT /locus_tag="DIP0989" FT /product="Putative hydrolase" FT /note="Similar to the N-terminal region of Pichia jadinii FT beta-D-fructofuranoside fructohydrolase Inv1 TR:O94224 FT (EMBL:Y12659) (533 aa) fasta scores: E(): 1.5e-09, 26.33% FT id in 300 aa, and to the C-terminal region of Pseudomonas FT mucidolens endo-inulinase TR:Q9RGC0 (EMBL:AF141320) (776 FT aa) fasta scores: E(): 3.6e-07, 21.77% id in 473 aa" FT /protein_id="CAE49507.1" FT /translation="MTHRPELHVTPEIGILDAPAGALFDGTRWHLFHQFRPKATAPSRW FT AHDYATTDPFNWEICDDVIAPQGDEIRLRAGSVTSDGKTTRLYFTSITNEGDSIHLAEI FT TDLDATTYDVNDDATTTDPHVTRLGQVVADQGGYTNFRSPCVVPNWVTADDRDEGHSGW FT IMLAVTGDMDEPTLVILDSENGTDWELRGPLKVVGNSGIEAERPVAPRIIRLRDEIDQN FT VYDILIVTIEIGGIDRSGYLVGKLHNNIFTVVSPFTRIDYGHDFTRPRNTNYTSHLNSS FT VAPEHRYSHAHVFGLMNGIGRLDDATTHLSFREEQWANCLSLPRRMTLQGGKIYHTPVA FT GLPDAIRDSDHAIMWTGLLDVPLGEKVTVELVDTTGNIAAKITHYGDLLELDRSMNPHH FT EGDDIAVAPLTEDDTDSVTIIVDGSTVEVFADGGQIAMASRVYFNGYCEAFTPQASDGA FT DILRSDVTKPLG" FT CDS complement(960040..960780) FT /transl_table=11 FT /locus_tag="DIP0990" FT /product="Putative decarboxylase (internal pH control FT related)" FT /note="Similar to Bacillus subtilis alpha-acetolactate FT decarboxylase AlsD SW:ALDC_BACSU (Q04777) (255 aa) fasta FT scores: E(): 2.1e-38, 44.78% id in 230 aa" FT /protein_id="CAE49508.1" FT /translation="MDDHNALLAERHTIFQSSLMTALLDGIYDGEISIGELLGHGNFGI FT GTFDALDGEMVILDGVCYQLRGDGSASEAALTQRSPFAIATNFVPRLKARVPRGMHRSE FT LSDFITSLLPSENYMYAVRISGMFSSVSVRTVTKQERPYRPMTQATGDDAELEFTNVSG FT VVAGFRTPIYEKGIGVPGCHVHFIDTDRTSGGHVLDFTMSEGTIEVCPGTDLQLRLPLT FT QDFSKASLAPDDLDAQIHATEVKG" FT CDS complement(960833..962005) FT /transl_table=11 FT /locus_tag="DIP0991" FT /product="Putative glycosyltransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT glycosyl transferase MT1250 TR:AAK45507 (EMBL:AE007001) FT (387 aa) fasta scores: E(): 2.9e-91, 60.72% id in 387 aa, FT and to Bacillus subtilis spore coat protein SA CotSA FT SW:CTSA_BACSU (P46915) (377 aa) fasta scores: E(): 1.6e-13, FT 24.37% id in 402 aa" FT /protein_id="CAE49509.1" FT /translation="MRVAMMTKEYPPEIYGGAGVHVAELTRHMRDIVDVDVHCMGAPRN FT EDNVYTYGFDPELTSANAALQTMSTGLRMAHAAAYADVVHSHTWYTGLGGHLAGLLHEV FT PHIVTAHSLEPDRPWKREQLGGGYDVSSWSEQNAMEYADVVIAVSAGMKDAILRAYPRI FT DADKIRVVLNGIDTQLWQPRPTFDDAEHSVLRDLGIKPDQPIVAFVGRITRQKGVEHLV FT KAARYFSPGVQLVLCAGAPDTPEIAARTQHLVEELQAEREGVVWVQEMLSKDKIQEILT FT AADAFVCPSIYEPLGIVNLEAMACATAVVASDVGGIPEVVVDGTTGSLVHYDPNDTDTF FT EHDLAEAVNAMVTDRKRAAAFGVAGRNRAVSEFSWGFIAQQTVDVYSSLL" FT misc_feature complement(960902..961441) FT /note="HMMPfam hit to PF00534, Glycosyl transferases group FT 1" FT CDS 962043..963326 FT /transl_table=11 FT /gene="glgC" FT /locus_tag="DIP0992" FT /product="glucose-1-phosphate adenylyltransferase" FT /EC_number="2.7.7.27" FT /note="Similar to Streptomyces coelicolor FT glucose-1-phosphate adenylyltransferase GlgC or SCM11.16c FT SW:GLGC_STRCO (P72394) (399 aa) fasta scores: E(): 2.6e-94, FT 61.61% id in 396 aa, and to Escherichia coli, and FT glucose-1-phosphate adenylyltransferase GlgC or B3430 or FT Z4792 or ECS4275 SW:GLGC_ECOLI (P00584) (430 aa) fasta FT scores: E(): 1.1e-64, 41.96% id in 417 aa" FT /protein_id="CAE49510.1" FT /translation="MFLCLIVGKPARGAEILDRLGFVRSKQNVLAIVLAGGEGKRLFPL FT TEDRAKPAVPFGGTYRLIDFVLSNLVNAGYLKICVLTQYKSHSLDRHISQAWQFSGPTS FT QYIASVPAQQRLGKRWYMGSADAILQSLNLVYDERPDYVLVFGADHVYRMDPEQMVADH FT IASGKAVTVAGIRVPRSEASAFGCIQADENNNITEFLEKPADPPGTPDDPSMTFASMGN FT YVFSTDALIQALKEDENNPDSEHDMGGDIIPYFVSMGQANVYDFNKNVVPGSTDRDRAY FT WRDVGTVDAFYEAHMDLISVHPVFNLYNQQWPIRSTERGDLPPAKFVQGGIAQASMVAQ FT GSIVSGSTVRNSVVSTDVVVEEGATVEGSVIMPGARIGKGAVVRHCILDKNVVVSDGQV FT IGVDRERDEQRFQISPGGVVVVGKNFVV" FT misc_feature 962130..962945 FT /note="HMMPfam hit to PF00483, Nucleotidyl transferase" FT misc_feature 962145..962204 FT /note="ScanRegExp hit to PS00808, ADP-glucose FT pyrophosphorylase signature 1." FT misc_feature 962400..962426 FT /note="ScanRegExp hit to PS00809, ADP-glucose FT pyrophosphorylase signature 2." FT misc_feature 962694..962726 FT /note="ScanRegExp hit to PS00810, ADP-glucose FT pyrophosphorylase signature 3." FT CDS complement(963385..964062) FT /transl_table=11 FT /locus_tag="DIP0993" FT /product="Putative methyltransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT O-methyltransferase MT1258 TR:AAK45515 (EMBL:AE007002) (215 FT aa) fasta scores: E(): 6e-17, 37.91% id in 182 aa" FT /protein_id="CAE49511.1" FT /translation="MSPPQSPPPRHTLSIVNAPSDFIRNYIDSTTDVSDALATAREDAQ FT EFGLHVPDSITGQLLTTLAGVSRAHGAIAVTPAASVVGLHLLAGLGEKGILTCIDPEPE FT HQKRAKKAFRDAGYGSSRIRFLPSRPLDVMGRLARGQYQVIFGEVAPLDLRAFIDASLP FT LLASGGVLVLPGALLDGTVADSTRKDRETVAAREADDYVRNLDEVVVCRLPLGGGTTLI FT TKL" FT CDS 964148..964867 FT /transl_table=11 FT /locus_tag="DIP0994" FT /product="Putative ECF family RNA polymerase sigma factor" FT /note="Similar to Mycobacterium avium putative RNA FT polymerase sigma factor SigE TR:O05735 (EMBL:U87308) (251 FT aa) fasta scores: E(): 1.2e-47, 62.33% id in 223 aa, and to FT Bacillus subtilis RNA polymerase sigma factor SigW FT SW:SIGW_BACSU (Q45585) (187 aa) fasta scores: E(): 4.2e-13, FT 32.36% id in 173 aa" FT /protein_id="CAE49512.1" FT /translation="MRCQPFCRNLAGFPQNSPAQSTTMTYTHGSALPSTDDVTIDADVA FT TEELTGTAAFDAGVGDMPSWEELVAQHADSVYRLAFRLSGNQHDAEDLTQETFMRVFRS FT LKGYQPGTFEGWLHRITTNLFLDMVRHRAKIRMEALPEDYERVPGTDMTPEQAYNVSNL FT DPALQKALDDLSPDFRVAVVLCDVVGMSYDEIADTLGVKMGTVRSRIHRGRSQLRAHLE FT NQATSDEGAQLLLATGR" FT misc_feature 964379..964543 FT /note="HMMPfam hit to PF00776, Sigma-70 factor (ECF FT subfamily)" FT misc_feature 964460..964507 FT /note="ScanRegExp hit to PS00225, Crystallins beta and FT gamma 'Greek key' motif signature." FT misc_feature 964715..964780 FT /note="Predicted helix-turn-helix motif with score 1360 FT (+3.82 SD) at aa 190-211, sequence MSYDEIADTLGVKMGTVRSRIH" FT CDS 964908..965321 FT /transl_table=11 FT /locus_tag="DIP0995" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML1077 TR:Q9CCA5 (EMBL:AL583920) (139 aa) fasta scores: FT E(): 8e-09, 40.35% id in 114 aa" FT /protein_id="CAE49513.1" FT /translation="MKKEHSPKNKVRHFASVEHLNPEAVAAFVDNELSPAAAHRAKIHL FT VHCAECREEIHRQRRAADRLRDGNNSDMRPSSDLIAKLQSIAACCPDGPTAEEVPSSPQ FT SLLDKLDGVARNIYKTTKTLREARNEALRQYDR" FT CDS 965352..965795 FT /transl_table=11 FT /locus_tag="DIP0996" FT /product="Putative Sec-independent twin-arginine FT translocase system protein" FT /note="Similar to Streptomyces lividans twin arginine FT translocation complex component TatB TR:Q9EWB3 FT (EMBL:AJ292256) (158 aa) fasta scores: E(): 1.8e-05, 28.88% FT id in 135 aa, and to Escherichia coli Sec-independent FT protein translocase protein TatB or MttA2 or B3838 or Z5359 FT or ECS4767 SW:TATB_ECOLI (O69415) (171 aa) fasta scores: FT E(): 0.0023, 29.33% id in 150 aa" FT /protein_id="CAE49514.1" FT /translation="MFSSIGWPEIFTVLILGLIIIGPERLPKVIEDVRAAIYAAKKAIN FT NAKEELNGNLGAEFDEFREPINKIASIQRMGPKAVLTKALFDEDENFMDNFDPKKIMAS FT GTEGEAYRERGINPQPAGDSASPQTPSNKESQPKAGFSWDDIT" FT misc_feature 965355..965417 FT /note="FPrintScan hit to PR01506, Bacterial sec-independent FT translocation TatB protein signature" FT misc_feature 965415..965474 FT /note="FPrintScan hit to PR01506, Bacterial sec-independent FT translocation TatB protein signature" FT misc_feature 965472..965528 FT /note="FPrintScan hit to PR01506, Bacterial sec-independent FT translocation TatB protein signature" FT CDS complement(965798..966931) FT /transl_table=11 FT /locus_tag="DIP0997" FT /product="Putative ATP-binding protein" FT /note="Similar to Mycobacterium tuberculosis Mrp protein FT homolog or Rv1229c or MT1267 or MTCI61.12c or MTV006.01c FT SW:MRP_MYCTU (O33225) (381 aa) fasta scores: E(): 1.4e-84, FT 65.21% id in 368 aa" FT /protein_id="CAE49515.1" FT /translation="MTHTLTESDVRAALARVEDPEIGKPITEIGMVKSINIDGNNVDVD FT IYLTIAACPMKNTLVTNTKAAIEDIDGVGTVNVGTDVMSDEQRRELRMSLRGSVDEPVI FT PFAQPDSTTRVFAVASGKGGVGKSSMTVNLATALAAHGLKVGVLDADIYGHSVPGMLGS FT TDRPHAVDDMIMPPQAHGVKLISIAHFVEGNAPVVWRGPMLHRAIQQFLADVFWGDLDI FT LLLDLPPGTGDIAISVAQLVPNAELLVVTTPQSAAAEVAERAGSISIQTNQKIAGVIEN FT MGSMVLPDGSTMDVFGSGGGQAMADRLKALTGTPVPLLGSVPLDPRLREGGDAGTPIAV FT SDPQSPTGAAIHKIADKLVVRRDSLAGKPLGLGVTSH" FT misc_feature complement(966497..966592) FT /note="HMMPfam hit to PF00142, 4Fe-4S iron sulfur cluster FT binding proteins, NifH/frxC family" FT misc_feature complement(966548..966571) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(966656..966913) FT /note="BlastProDom hit to PD005595, PD005595" FT misc_feature complement(966692..966916) FT /note="HMMPfam hit to PF01883, Domain of unknown function FT DUF59" FT CDS complement(966944..967540) FT /transl_table=11 FT /locus_tag="DIP0998" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 20.4 kDa protein Rv1231c or MTV006.03c TR:O86314 FT (EMBL:Z98260) (180 aa) fasta scores: E(): 4.5e-31, 60.81% FT id in 148 aa" FT /protein_id="CAE49516.1" FT /translation="MAEYNNRSELDTPFLKQRRSFLKLDDDTIGAYAEKIARFFGTGTY FT LMWQTVFVVLWVALNCGVFVWQWDPYPFILLNLAFSTQAAYAAPLILLAQNRQEDRDRV FT SLNEDRRRAFETKADTEFITRELAGLRLAVGDMVSRDYLRHELEDLQNMLDRIEAKLDD FT EAASRVALIHQINESGHEEISDPTQGDLREHDKNE" FT misc_feature complement(order(967262..967327,967340..967405)) FT /note="2 probable transmembrane helices predicted for FT DIP0998 by TMHMM2.0" FT CDS complement(967544..968833) FT /transl_table=11 FT /locus_tag="DIP0999" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 47.3 kDa protein MT1270 TR:AAK45528 FT (EMBL:AE007003) (435 aa) fasta scores: E(): 5e-77, 52.51% FT id in 417 aa" FT /protein_id="CAE49517.1" FT /translation="MSQVTRVYAGRLAGMIVRGPDTDAIGRVRDVIVNVRPNGQPSRVL FT GLVVEMMNNRKIFLPMLRVAAIEPQEITLVSGSVSLRAYKPRNGEVAIIADIVGSKVHI FT DDPELDHLHGRPVEVADIELERTRTRDWAISRVAVIGERPKFGRRPELFTCPWSHVHGI FT SAGGVGITDAAAELIAEFEDMRPADIATVLYELPDAQRANVAKELDDDRLADVLQEMSE FT DRQAELIETLDIERAADVLEEMDPDDAADLLGELDDDKADVLLELMDPEESAPVRRLMS FT FSPDTVGALMTPEPLILSPQTTVAEALALARNPDLPTSLASIVFVVRPPTATPTGKYLG FT CVHLQKLLREPPSELVSGILDPDLPPLWASDSQETAARYFATYNLVCGPVVDNDNHLLG FT AVAVDDLLDHMLPDDWRDTGIRPDETPKEV" FT CDS 968959..969468 FT /transl_table=11 FT /locus_tag="DIP1000" FT /product="Conserved hypothetical membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 18.6 kDa protein Rv1234 or MTV006.06 TR:O50451 FT (EMBL:AL021006) (175 aa) fasta scores: E(): 2.9e-27, 56.42% FT id in 140 aa" FT /protein_id="CAE49518.1" FT /translation="MTLNFNARPSDNTPAQLRDRAKPEGWPVGSFESYAQAQAAVDMLA FT DNNFPVDKLTIVGVDLMEVERVVGKLTWGRVLIGGAASGAWMGLFVAVVMGMVSGTWGA FT ALMMGIPLGVVFGMGLAAVQYASTNGKRDFASSTHIVAGRYDVLCHPSAAREARDTIAN FT YMRSAR" FT misc_feature order(969184..969252,969262..969330) FT /note="2 probable transmembrane helices predicted for FT DIP.1000 by TMHMM2.0" FT CDS 969480..970199 FT /transl_table=11 FT /locus_tag="DIP1001" FT /product="Putative exported protein" FT /note="no database matches" FT /protein_id="CAE49519.1" FT /translation="MNVAKRGKGPVGAMKRGHVTQTLLLGTVAAVGLGGAACAEFEPET FT PKNFDQTKVVSIVIDPDDWTQAVLGEAYKQALTKDAGRLAVVHVRVGEKDSADSASMLS FT TGRADLYISCTGRELKAHDAKAAAELSKEYTTDEDRFGSNRGQWRDRTYKELMARLGNR FT VDATDPSNAMACKQDQEFLPQSIVPLYRMPVFNRSELATLNHVTARLAQIDFDELVSYA FT QSHGSAATAVNDKLFDE" FT misc_feature 969480..969596 FT /note="Signal peptide predicted for DIP1001 by SignalP 2.0 FT HMM (Signal peptide probability 0.797) with cleavage site FT probability 0.655 between residues 39 and 40" FT CDS complement(970254..973985) FT /transl_table=11 FT /gene="odhA" FT /locus_tag="DIP1002" FT /product="2-oxoglutarate dehydrogenase, E1 and E2 FT components" FT /EC_number="1.2.4.2" FT /EC_number="2.3.1.61" FT /note="Similar to Corynebacterium glutamicum 2-oxoglutarate FT dehydrogenase OdhA TR:P96746 (EMBL:D84102) (1257 aa) fasta FT scores: E(): 0, 77.37% id in 1242 aa, and to Mycobacterium FT leprae 2-oxoglutarate dehydrogenase, E1 and E2 components FT OdhA or ML1095 TR:Q9CC97 (EMBL:AL583920) (1260 aa) fasta FT scores: E(): 0, 59.37% id in 1253 aa. Similar in the FT N-terminus to Escherichia coli dihydrolipoamide FT succinyltransferase component of 2-oxoglutarate FT dehydrogenase complex (E2) SucB or B0727 or Z0881 or FT ECS0752 SW:ODO2_ECOLI (P07016) blastp scores: E(): 4e-14, FT 27% id in 211 aa overlap, and in the C-terminus to FT Escherichia coli 2-oxoglutarate dehydrogenase E1 component FT SucA or B0726 or Z0880 or ECS0751 SW:ODO1_ECOLI (P07015) FT (933 aa) fasta scores: E(): 1.4e-103, 44.25% id in 879 aa" FT /protein_id="CAE49520.1" FT /translation="MRRAPAVSSASTFGQNDWLVDEMFQQFQKDPQSVDKEWRDLFEKQ FT GAPSTPGTEAKNTSPQPAAPAKKQPAPAKKPAPTTASAPASTEAKAAPKPENKKPAKKQ FT QPSPLERTGELPAAGSSAIKGIYKAIAKNMDESLEVPTATTVRDMPVKLMWENRSIINE FT HLKRTTGGKVSFTHIIGYAVVKATMAHPDMNNYYEVVDGKPTLNTPEHINMGLAIDVQQ FT KSGARALVVAAIKEAETLSFAEFVAKYEDIVARSRVGKLTMDDYSGVTISLTNPGGIGT FT RHSVPRLTKGQGAIIGVGSMDYPAEFAGASADRLAELGVGRLVTITSTYDHRIIQGAES FT GEFLRTMSQLFIDDAFWDEIFESIGIPYAPMRWASDLSNTGIDKNTRVMQLIEAYRSRG FT HLIADTNPLRWHQPGMPVPDHRDLDIATHGLTLWDLDRSFNVGGFGGKETMTLREVLGR FT LRAAYTLKVGSEYTHILDRDERLWLQDRIEAGMPKPSYAEQKYILQKLNAAQAFEDFLQ FT TKYVGQKRFSLEGAEALIPLMDSAIDTAAGQGLDEVVIGMPHRGRLNVLVNIVGKPLAT FT VFTEFEGHIEPKAAGGSGDVKYHLGAEGTHIQMFGDNEIKVSLAANPSHLEAVDPVMEG FT IARAKQDLLNKGDSTDGYSVVPMMLHGDAAFAGLGIVQETLNLAQLRGYTVGGTIHIIV FT NNQIGFTTTPDSGRSSHYATDLAKAYGCPVFHVNGDDPEAVVWVGRLATEYRRQFGKDV FT FIDMISYRRRGHNEADDPSMTQPEMYKLIDARNTVREQYKEDLLGRGELTTEDAEKVQR FT DFHDQMESIFNDVKETEKKPFEAQAGITSSQEVPHGLETNITREELVEIGQAYATAPEN FT FEFHQRVAPVAKKRLEAAQNGGIDWGWGELIAFGSLAAGGKFVRLAGEDSRRGTFTQRH FT AVVYDPRTGEEFNGLNDLAERKGNGGKFLVYNSALTEYAGMGFEYGYSVGNEDAVVAWE FT AQFGDFANGAQTIIDEYISSGEAKWGQTSSVILLLPHGYEGQGPDHSSARIERYLQLCA FT EGTMTVAQPTTPANYFHLLRRHVLGGLKRPLVVFTPKSMLRMKAATSSVEDFTQMKKFQ FT SVINDPRFVNGGLDKNKVKKIMLVSGKLYYDLAKRAQKDKRDDVAIVRIEMLHPIPFNR FT LKEAFDFYPNAEEIRFCQDEPANQGPWPFMHEHLPELIPGMLPMKRVSRRAQASTATGL FT SKVHAVEQQHLLDEAFAD" FT misc_feature complement(970713..971309) FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domain" FT misc_feature complement(971484..972476) FT /note="HMMPfam hit to PF00676, Dehydrogenase E1 component" FT misc_feature complement(972918..973637) FT /note="HMMPfam hit to PF00198, 2-oxo acid dehydrogenases FT acyltransferase (catalytic domain)" FT misc_feature complement(972927..973604) FT /note="BlastProDom hit to PD001115, PD001115" FT CDS complement(974130..977870) FT /transl_table=11 FT /locus_tag="DIP1003" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor ABC transporter FT protein, ATP-binding component SCC57A.34c TR:Q9RDG5 FT (EMBL:AL136519) (1243 aa) fasta scores: E(): 3e-116, 42.18% FT id in 1247 aa" FT /protein_id="CAE49521.1" FT /translation="MAPNVGSKLRAMLWRQPWIVIAAVISTVMTTLFDATIPLLAGSAV FT DTATGSLGGGNAEVQRVVWILVATALARYVFQFGRRFFAGVLSNTFQHTLRVSVLDSLQ FT RLDGPQQDKLRTGQIVSRSISDLNLAQAMVAMFPLLIGHVLKVVITIGILAWINVWLMF FT IAVACIPPLVWLSLRSRTTLFAATWSAQHSVANLATHIEQTVSGIRVVKAFAQESRELD FT RLDELSTQVYAEQMRSARLSARYRPLVQQLPTLALVIGIGLGGWLALDGHITIGSFLAF FT STYLTSMTSVVSMLAGMVVQMQMGLSSFDRVMDVVDMTAEHPDPEHPLDLPAGPLSLEL FT ENVHFDGILNGTTLTVPAGDTVAIVGPPGSGKTMAVQLLCGFYRPESGQIRLGGVDTTQ FT LRRHDLRNAVSCVFDDPFLYSASIRDNIAMGRNVTDVEIERAARIAQAHDFITALPHGY FT DEIVGERGLTLSGGQRQRIAIARAVLERPRVLILDDATSAIDVTTEHAIYEQLSTELSD FT VTILAVAHRNSTLSLADSVALIDNGRIVDHGSLSYMRANPQFVYLMDVQEHLRKRNSHE FT PFVPFDDGTEPEWTQLWPEIASSQHDSRLTINSSAMKAAASVAGANPAAGGRGRGRGGM FT AASIPATPELLARVDALPPTRDTPGPRPLLDHDHGKVTAHQLFASVRWLIVVVIGLYIV FT GVAASLTIPTLVRAAIDRGVTAHNPSALWIVTGIGISVVIVAWLADIATTIVTARTGER FT LLYHLRLRSYAQLQRLGMDYFEKTMSGTIMTRMTTDIEALNSFLQTGLAQTVVSLTTLL FT GILALLGATSLQLFAIAVIGVPLIGVATVFFKRISSRLYTQAREQISGVNALFQEHIGG FT LRSAQMARMEDAALADFSTQAARYRATRIKTQTAVAVYFPGINAVSQILQAAVLGVGAH FT LVANGELAAGVLVAFILYLDRLYGPIQHLSQVFDSYQQAQVGFRRISDLLSTPSSVPNE FT GRLVPAQSENEGTDITFHNVGFSYSHDSAAVIDDLTLTIQPGSTVAVVGPTGAGKSTIV FT KLIERFYDPTTGKVASKRHDIRDYDIHAWRRTVGFVPQETHLFTGTVAENIAYGLPDAT FT AEEITDAARRVGALRAIAAIDGGFRATVGERGQGLSSGQRQLIALARAEMMKPEILLLD FT EATATLDPATEKTILSAAERLTQTRTSVIVAHRLATAAKADRILVIANGAVVEDGDHAS FT LRTYGGIYATMWAHGEQEIPR" FT misc_feature complement(974223..974783) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(974226..974780) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(974235..974447) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(974697..974774) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(974736..974759) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(975003..975821) FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT misc_feature complement(order(975090..975155,975342..975407, FT 975420..975485,975654..975710,975756..975821, FT 976986..977051,977064..977129,977340..977390, FT 977403..977468,977643..977699,977745..977810)) FT /note="11 probable transmembrane helices predicted for FT DIP1003 by TMHMM2.0" FT misc_feature complement(976242..976799) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(976245..976796) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(976254..976466) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(976422..976466) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(976713..976790) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(976752..976775) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(976995..977813) FT /note="HMMPfam hit to PF00664, ABC transporter FT transmembrane region." FT CDS complement(977878..978708) FT /transl_table=11 FT /locus_tag="DIP1004" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 27.6 kDa protein Rv1249c or MTV006.21c TR:O50464 FT (EMBL:AL021006) (262 aa) fasta scores: E(): 2.1e-15, 31.57% FT id in 209 aa" FT /protein_id="CAE49522.1" FT /translation="MGFVRKTLGSLGDSVMFGRRDSKEQAVTDAFGSDSQALIAESGMA FT GKILVNSLDRVVHLQRSAITGYVDWLRSKNPEASPAEIQDLMNKHFVRLATGSGAGAGT FT AAAIPGIGFVTGALTISAESLVFLDAAAFYTVASAYLRGADITDPERRKALILVALSGS FT QGTALVDASLTATSSVSAISRMSPGNVREVNNQLVKIALNQISKRMKQAWIGKIMPMGI FT GAVLGTMANRKLAAKVVHSTSESLGALPSVFDTPAPSEDEVQEPVALLASQVKE" FT repeat_region complement(978820..978878) FT /note="Possible inverted repeat" FT repeat_region 978820..979495 FT /note="repX" FT CDS complement(978917..979228) FT /transl_table=11 FT /locus_tag="DIP1005" FT /product="transposase remnant" FT /note="Similar to part of Mycobacterium smegmatis IS1096 FT TnpA protein TR:Q50440 (EMBL:M76495) (413 aa) fasta scores: FT E(): 0.7, 29.47% id in 95 aa" FT /protein_id="CAE49523.1" FT /translation="MSALIDTLVGMKDAVVAEIVQLGRTMNKRRKGILAYFDHKQCTLK FT PEEPPFGGISKDFSQNFTPNRFQTGRLSRFGVKCRLFGGERGWRAHQRPPAPTNASQS" FT repeat_region complement(979436..979495) FT /note="Possible inverted repeat" FT CDS complement(979492..980304) FT /transl_table=11 FT /locus_tag="DIP1006" FT /product="shikimate 5-dehydrogenase family protein" FT /note="Similar to Deinococcus radiodurans shikimate FT 5-dehydrogenase, putative DR0077 TR:Q9RY73 (EMBL:AE001871) FT (273 aa) fasta scores: E(): 1.2e-48, 54.3% id in 267 aa, FT and to Haemophilus influenzae hypothetical shikimate FT 5-dehydrogenase-like protein Hi0607 hi0607 SW:YDIB_HAEIN FT (P44774) (271 aa) fasta scores: E(): 1.4e-45, 49.25% id in FT 268 aa, and to Escherichia coli hypothetical shikimate FT 5-dehydrogenase-like protein ydib ydib or B1692 FT SW:YDIB_ECOLI (P28244) (288 aa) fasta scores: E(): 1.9e-09, FT 30.03% id in 263 aa" FT /protein_id="CAE49524.1" FT /translation="MVNLVDRNTVLCVSLAARPSNHGVRYHNWLYDQLGLNFIYKAIAP FT ADITAAVAGIRGLNIRGAGVSMPYKQDVIPLIDALHPSAQRIHAVNTIVNDDGVLTGYN FT TDYVAVASLLKSHEIPADMSVAVRGSGGMANAVVAALADHGMTGTVVARNAETGSALAQ FT RYGWEHSTEVPAKTSMLVNVTPLGMCGDHEHVQAFSNAEIDAAQVIFDVVAYPVETPLI FT KAAESKGKKIINGGEVICLQAAEQFALYTGVTPSAAFVRAAEDYAQQG" FT misc_feature complement(979546..980229) FT /note="HMMPfam hit to PF01488, Shikimate / quinate FT 5-dehydrogenase" FT CDS 980324..981904 FT /transl_table=11 FT /locus_tag="DIP1007" FT /product="Putative type B carboxylesterase" FT /EC_number="3.1.1.1" FT /note="Similar to Bacillus spBP-7. type B carboxylesterase FT EstA1 TR:Q9L378 (EMBL:AJ278066) (486 aa) fasta scores: E(): FT 3.2e-47, 34% id in 500 aa, and to Bacillus subtilis FT para-nitrobenzyl esterase PnbA SW:PNBA_BACSU (P37967) (489 FT aa) fasta scores: E(): 3.3e-49, 33.93% id in 501 aa" FT /protein_id="CAE49525.1" FT /translation="MSDWTPNDVVRTTSGRVGGLSTTATDTTPAVRTWRGVPYGRADRF FT RAPTSPHPWKEIKDCTHYASVAAQPTYGPSDRIRGSEDCLNLDIVRPDHDRPLPVVVYF FT HGGSFVYGSSHEQLLRGHRLATSMDVVYVAINFRLGALGYLDLRSLGDDCVANPAILDQ FT LLALKWIQANVQAFGGDPTNVTVMGESAGGAAVLTLMCTPTAMGLFHKAIAQSPPIAAI FT HSKAQSTLWAGMLAQRLGVNTLKELRGLPVADIIRAGQSMMWRSRELIYLNSCYSPTVD FT GTTLFEHPLKVFERGQQLKVPLLVGTNVDETSFAKGMYLRSKARTRAAHRVLTTFDPHS FT ADHVLGVYQGAKRRRDFAQLIADGVFWAPSIAAAQAHSTVAQTWMYRFDFAPALLRWLG FT LGAMHSMELTPIFGDMNASRMSSLNVRNSRVALEQLGEQMQFHWARFIHHGQPGEAWPS FT YHTAGDTEPGRATMVFDRESRVIYDPYSQRRRAWSEYDMTEWGLGREDLLRALGLYEEP FT TYFAPLELE" FT misc_feature 980453..981706 FT /note="HMMPfam hit to PF00135, Carboxylesterase" FT misc_feature 980618..980938 FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT misc_feature 980852..980899 FT /note="ScanRegExp hit to PS00122, Carboxylesterases type-B FT serine active site." FT CDS 981926..982735 FT /transl_table=11 FT /locus_tag="DIP1008" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49526.1" FT /translation="MDSVLDAAFDRLMAEHERFRPLLDPSVSQGNVVDVAQLYSDDTVK FT TAIAASQHIFGVPTDKHAAQLWFFSLLGDALNPSVTAMVSIDVVPLLDIRQSTVFHRDD FT TGYWFGFRPHVCADSVRESGRALAVSVAPLIVAICRLTGMRPAPLWAVVADAAVQPAMA FT AGNDDFETARALDTARELVAGLREGVDSLGGDVAEFKAAIPQHNFEQICDGCFAPIDPG FT VEPDYVVAHRVSCCMIYHSPTAGKCTSCPHQDKDVRKNALIAASESF" FT CDS 982785..983597 FT /transl_table=11 FT /locus_tag="DIP1009" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49528.1" FT /translation="MSFFEDLATALDNEGIESRVHDDVLFVPITSDLEIQFVEIDSVVP FT AANVYIAAADVDEDDDEFEAALVSVVFSVEDAVRTVAEHVATDQVVTVLRDLLEGTDDR FT IAELEFFQDPHDPHMVHAEVAENSELQVVVDVVDGEALATVTFVAFGESFDDLVDQAID FT ELWSDQSNDSLSDEDRDRLFYDVAAELTEEAGEVLQLGSYSDCDKLFDVLSVALENADD FT WEEQLAPLESAEADLESEGTSFESEDLLGDDDDLEFDDLDDEDEDEDA" FT misc_feature 983247..983591 FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT CDS complement(983606..984148) FT /transl_table=11 FT /locus_tag="DIP1010" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49529.1" FT /translation="MKFIQNLTKIHQSTSHMAHAHRSDSAVDSQVASTLREDTVARFSM FT LMKHPRSLARPTVTWRPPSLKLVGLHSTISPQPHLVASISRRRIGPSVKARLKGFGVRQ FT QPAYLMSVRISDSKSNNVSFEHAEQWMLQLVGPQYAECIHMITDHGQCPVFVWIVGGDF FT QPLPSPASMFQTFQAAA" FT CDS 984453..985370 FT /transl_table=11 FT /locus_tag="DIP1011" FT /product="Putative aldose 1-epimerase" FT /note="Similar to putative aldose 1-epimerases e.g. FT Escherichia coli O157:H7 putative aldose-1-epimerase FT ECS4802 TR:BAB38225 (EMBL:AP002567) (300 aa) fasta scores: FT E(): 3.1e-21, 29.09% id in 299 aa, and to Escherichia coli FT hypothetical protein YihR or B3879 SW:YIHR_ECOLI (P32139) FT (308 aa) fasta scores: E(): 7.7e-21, 30.35% id in 280 aa, FT and to Salmonella typhimurium putative aldose-1-epimerase FT YihR TR:Q9L7R7 (EMBL:AF220438) (280 aa) fasta scores: E(): FT 1.1e-13, 29.53% id in 281 aa. Contains weak match to FT PFAM:PF01263 Aldose 1-epimerase E: 0.089" FT /protein_id="CAE49531.1" FT /translation="MDSLGEQPSNRAPVITISSGRYLAQIATYGGGIKSLTYDGRPLVE FT TYPDDAFPPLNAGVVLAPWPNRTDAGAYDFQGQSYQLPITEPDRNNAIHGFVANAVWNI FT DLIRPARVILSTTIEPQQGWPWAIELAADYLLTDSGLRAQFTATTPHEAVPFGFGWHTY FT LSAQGAEVDKTTLRVGVDKQWMLDDRNLPTGELVQPTNDVSGGLPMAGKLLDDCFLAER FT TPVTTVLESQGVGVSMHCSEQFPWFQIFTPDPAWEMPYPGRGRSVAVEPMTTSPNGLNL FT GIDTIGAASPWHGTITISAYNKHS" FT CDS 985407..987065 FT /transl_table=11 FT /locus_tag="DIP1012" FT /product="Putative sodium:solute symporter" FT /note="Similar to Streptomyces coelicolor putative FT sodium:solute symporter SCE66.18 TR:Q9K3S5 (EMBL:AL359989) FT (562 aa) fasta scores: E(): 7e-115, 56.42% id in 553 aa, FT and to Rattus norvegicus sodium-dependent multivitamin FT transporter slc5a6 or smvT SW:SL56_RAT (O70247) (634 aa) FT fasta scores: E(): 3.3e-23, 24.2% id in 504 aa" FT /protein_id="CAE49532.1" FT /translation="MDTALRLDATWVDYLLVALYFVFVLGIGWAAKARVSSSIDFFLSG FT RGLPAWVTGLAFVSANLGAVEIIGMSANGVQYGFQTMHYFWIGAVPAMVFLGIVMMPFY FT YGSKVRSVPEFMRRRFGSAAHLVNAVSFAVAQLLIAGVNLFLLAKVVNALLGWPLWVAL FT VLAAVIVLSYITLGGLSAAIYNEVLQFFVILAMLLPITIIGLNRVGGWQGLKEQVAIEH FT NFHTWPGVEISGFDNPVISVIGITFGLGFVLSFGYWTTNFVEVQRAMASESISAARKTP FT IIGAFPKMFVPFLVVLPGMVASVTVAELIGDNPAGKPNDAILYLMRDLLPNGLLGVAIA FT GLLASFMAGMAANISAFNTVISYDIWQTYVIKDREDDYYLKFGRLATVAATLIAVFTAL FT LAQNFGNIMDYLQTLFGFFNAPLFATFILGMFWKRMTPHAGWTGLVAGTASAIFYWYLA FT TFTESSATLLNLPGQGTAFVAAGIAFSVDILVSVIVTMFTQPKPDHELVGFVKSVTPKD FT HFEDHSEDGQPWYRRTVPLGMLCLILVIALNVIFA" FT misc_feature 985434..986789 FT /note="ProfileScan hit to PS50283, Sodium:solute symporter FT family profile." FT misc_feature order(985434..985493,985530..985598,985656..985724, FT 985782..985850,985878..985946,985965..986033, FT 986121..986189,986250..986318,986409..986477, FT 986538..986606,986634..986702,986721..986789, FT 986832..986900,987006..987059) FT /note="14 probable transmembrane helices predicted for FT DIP1012 by TMHMM2.0" FT misc_feature 985527..986747 FT /note="HMMPfam hit to PF00474, Sodium:solute symporter FT family" FT CDS 987078..987359 FT /transl_table=11 FT /locus_tag="DIP1013" FT /product="Putative membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein SCE66.19 TR:Q9K3S4 (EMBL:AL359989) (98 aa) fasta FT scores: E(): 6.7e-06, 46.15% id in 65 aa" FT /protein_id="CAE49534.1" FT /translation="MHKNTTQTPAGSHTHLAGAFDIRNVIGALIGLYGVILVLCSFALD FT PGINPDTGVAKSAQDNLWAGLVMVIVGVVFFAWAKLRPIVIEESAGEK" FT misc_feature order(987150..987218,987261..987314) FT /note="2 probable transmembrane helices predicted for FT DIP1013 by TMHMM2.0" FT CDS 987359..988489 FT /transl_table=11 FT /gene="galT" FT /locus_tag="DIP1014" FT /product="Galactose-1-phosphate uridylyltransferase" FT /EC_number="2.7.7.10" FT /note="Similar to Escherichia coli galactose-1-phosphate FT uridylyltransferase GalT or GalB or B0758 SW:GAL7_ECOLI FT (P09148) (348 aa) fasta scores: E(): 1.2e-24, 30.34% id in FT 346 aa, and to Streptomyces lividans galactose-1-phosphate FT uridylyltransferase GalT SW:GAL7_STRLI (P13212) (354 aa) FT fasta scores: E(): 4.9e-30, 38.8% id in 384 aa, and to Homo FT sapiens galactose-1-phosphate uridylyltransferase GalT FT SW:GAL7_HUMAN (P07902) (379 aa) fasta scores: E(): 8.1e-29, FT 33.82% id in 340 aa" FT /protein_id="CAE49535.1" FT /translation="MNVTTSTLADGREIIYFDDHELREGERVLHDSRDLPHTQPLSEIR FT HDPLTNTWVAYAAHRMNRTFMPPANENPLAPTTPGNLPTEIPSPTYDVVVFENRFPSFS FT MNIAVGEDWESYVDGIDLYPRRPALARCEVVCFTPDVDKSFKDLPVSRIRTVINAWAHR FT TEALSALSGVQQVFPFENRGEEIGVTLQHPHGQIYSYPFLSPRLQAIVQSAQYYAETHD FT GHDLFDAIIREESAVQTRVIERTEHFIVFVPAAAKWPVEAMVMPLRAVADFTELTDVER FT DDLAALLKRLYTAVDSFFEGVTKTPYIAGWTQAPVDPALRPFGRLHLQLFSLMRSPNRM FT KFLAGSESSQGVWINDTTPERIAQRFKEVWPHATLD" FT misc_feature 987485..987997 FT /note="BlastProDom hit to PD005051, PD005051" FT misc_feature 987749..987970 FT /note="HMMPfam hit to PF01087, Galactose-1-phosphate uridyl FT transferase, N-terminal domain" FT misc_feature 987893..987946 FT /note="ScanRegExp hit to PS00117, Galactose-1-phosphate FT uridyl transferase family 1 active site signature." FT misc_feature 988052..988312 FT /note="HMMPfam hit to PF02744, Galactose-1-phosphate uridyl FT transferase, C-terminal domain" FT CDS 988473..989702 FT /transl_table=11 FT /gene="galK" FT /locus_tag="DIP1015" FT /product="Galactokinase" FT /EC_number="2.7.1.6" FT /note="Similar to Streptomyces lividans galactokinase GalK FT SW:GAL1_STRLI (P13227) (397 aa) fasta scores: E(): 1.3e-27, FT 36.45% id in 384 aa, and to Homo sapiens galactokinase FT GalK1 or GalK SW:GAL1_HUMAN (P51570) (392 aa) fasta scores: FT E(): 3e-23, 38.29% id in 410 aa, and to Escherichia coli FT galactokinase GalK or GalA or B0757 or Z0927 or ECS0785 FT SW:GAL1_ECOLI (P06976) (381 aa) fasta scores: E(): 1e-11, FT 32.08% id in 399 aa" FT /protein_id="CAE49536.1" FT /translation="MPRWINTRSPEQLDTDARALFTQAFGNEPEGVWAAPGRVNVIGDH FT VDYAGGMSIPFALQQNTAVAVRQRDDALLNVVSLIPGAKEPARLSIPLAEVGPLNPDSW FT AGYVVGTVWAGVQSGVIPRCSGLDIAVVSDVPVGSGLSSSAALECSIGVAAYELAVGHA FT PDAAARAELVEAAIRAENEVVGASTGGLDQRASIFGEEGKALVIDFHTNQFRLVPFDLE FT SRGLVLLIADTNAPHALNDGQYASRRGVTDEVAHALGGENATIRSVNSTGDILDRTREW FT AAANNKDIDVVVRRVKHIVEETERTAEAATALDAGNFDRFRELMKDSHISLRDQYKVST FT PELDSAFDAAGQYGARMTGGGFGGSVITLVAADRVEEVATAIADAAQRQGYPEPTFVVA FT SPGRGARRLS" FT misc_feature 988575..988622 FT /note="FPrintScan hit to PR00960, LmbP protein signature" FT misc_feature 988575..988649 FT /note="FPrintScan hit to PR00959, Mevalonate kinase family FT signature" FT misc_feature 988581..988616 FT /note="ScanRegExp hit to PS00106, Galactokinase signature." FT misc_feature 988581..988637 FT /note="FPrintScan hit to PR00473, Galactokinase signature" FT misc_feature 988782..988817 FT /note="FPrintScan hit to PR00473, Galactokinase signature" FT misc_feature 988809..989027 FT /note="HMMPfam hit to PF00288, GHMP kinases putative FT ATP-binding protein" FT misc_feature 988848..988904 FT /note="FPrintScan hit to PR00473, Galactokinase signature" FT misc_feature 988869..988937 FT /note="FPrintScan hit to PR00959, Mevalonate kinase family FT signature" FT misc_feature 988872..988937 FT /note="FPrintScan hit to PR00960, LmbP protein signature" FT misc_feature 988875..988910 FT /note="ScanRegExp hit to PS00627, GHMP kinases putative FT ATP-binding domain." FT misc_feature 989010..989069 FT /note="FPrintScan hit to PR00959, Mevalonate kinase family FT signature" FT misc_feature 989352..989396 FT /note="FPrintScan hit to PR00473, Galactokinase signature" FT misc_feature 989532..989585 FT /note="FPrintScan hit to PR00959, Mevalonate kinase family FT signature" FT CDS complement(989756..992887) FT /transl_table=11 FT /locus_tag="DIP1016" FT /product="Putative helicase" FT /note="Similar to Streptomyces coelicolor putative helicase FT SCE20.37 TR:Q9RD88 (EMBL:AL136058) (945 aa) fasta scores: FT E(): 5.3e-162, 46.4% id in 933 aa, and to Vibrio cholerae FT helicase-related protein VC0812 TR:Q9KTS6 (EMBL:AE004166) FT (979 aa) fasta scores: E(): 3.5e-48, 31.6% id in 674 aa" FT /protein_id="CAE49537.1" FT /translation="MSTADSALPFGVYETPITRRISERLTETQKLSPDSVAEIKSLDDE FT EVKRRYTDALAREFSLRFEAKLSSLNEEKERIALINSMAALLDTDSSVDSEQLLTSIRP FT TSLIQAPQLPEQPLSSLALLTNAKNESNMDLEIRRELETADSVDLLCAFIKTGGLRVLD FT EPLLKLRDRGVPLRIITTTYCGATDKEAIDRLVEKYGAEIKISYETNMTRLHAKAWLFK FT RNSGFDTAYIGSSNLSASALVNGMEWNVRTSSGKSPEIVSKFIATFDSYWADKHFVSYD FT PRTDGQELEYALKRDRFASGGSDELAISGLEVKPYPYQQDMLESLQAEREQHNRHRNLL FT VAATGTGKTVVAALDYRSMCDALGRRPRLLFIAHRKEILQQALRTFREVLSDGNFGELL FT VDGVLPKEWTHVFASIQSLNTSRMEALGKDHFEFIIIDEFHHAQAISYRKVMDYFEPQE FT LLGLTATPERGDGINVKEFFDYRVAHELRIWDALSLQLLAPMQYFGVNDDTDLQSVAWD FT KRKHEYAVSALNELYVARGEKRARLILQSLNNYAFGLSGVKALGFCVSVEHATFMAAYF FT SKQGVPAAVLSGQDNATTRRNRLDDLKTGRIKVIFSVDLFNEGLDIPEINTVLLLRPTQ FT SPVLFLQQIGRGLRLYQGKESCLILDFVGLHSQEFDMESRFRALTGFTGKELVDQAEND FT FPAIPAGSSIILDKLTKEQVLKNLKQVTRTTSKRMISLTGEIGSTSLRKFIDSTGIPVM FT DVYRPKDYSWNFYLGQAGLADKADPRKDLLLNRVKSFLHINDYQRANAYRDIIASTANT FT IGSLPLDLQPYAKMLILNIWANRPQKVIPATFDKALEEIHRHRAFCKELSELLEIQVED FT SKVNPAPLKGDLGNTVLLSHAQYSLAELMAVLEDGEELPIMAKLPREGVRKLNNFNADL FT FLVTLQKSDKHFNEKTSYKDYPISPDLFHWESQSRTAIKSPTAQRYIHHKELDHSLLLA FT VRNANKNEVGLAESFTLLGQVDYVSHKNEKPIQFELALQRSMPQHLFIQGRAVV" FT misc_feature complement(990914..991228) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(990935..991180) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(991421..991957) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(991421..991972) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature complement(991841..991864) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(992165..992260) FT /note="ProfileScan hit to PS50035, Phospholipase FT D/Transphosphatidylase (also polyphosphate kinases, FT secreted nucleases)" FT CDS complement(992898..993293) FT /transl_table=11 FT /locus_tag="DIP1017" FT /product="Putative NUDIX-family hydrolase" FT /note="Similar to Staphylococcus aureus (strain N315) FT SA2278 or SAV2490 TR:BAB58652 (EMBL:AP003137) (130 aa) FT fasta scores: E(): 1e-24, 56.91% id in 123 aa, and to FT Escherichia coli CTP pyrophosphohydrolase NudG or B1759 FT SW:NUDG_ECOLI (P77788) (135 aa) fasta scores: E(): 3.3e-13, FT 41.4% id in 128 aa" FT /protein_id="CAE49538.1" FT /translation="MKKRIKVTGAVLTRNGLILAAQRGQSKNQGKLWEFPGGKIEPGET FT PEEALQRELHEELRCDAHVGKFITTTEFEYDFGIVELSTYFCTLNGSEPQLTEHEQIKW FT LRASELAQLDWAPADIPTVKLLENFTN" FT misc_feature complement(992916..993287) FT /note="HMMPfam hit to PF00293, MutT-like domain" FT misc_feature complement(993108..993155) FT /note="FPrintScan hit to PR00502, NUDIX hydrolase family FT signature" FT misc_feature complement(993117..993182) FT /note="ScanRegExp hit to PS00893, Nudix hydrolase FT signature." FT misc_feature complement(993153..993197) FT /note="FPrintScan hit to PR00502, NUDIX hydrolase family FT signature" FT misc_feature complement(993216..993293) FT /note="Signal peptide predicted for DIP1017 by SignalP 2.0 FT HMM (Signal peptide probability 0.891) with cleavage site FT probability 0.651 between residues 26 and 27" FT CDS 993506..995548 FT /transl_table=11 FT /gene="deaD" FT /locus_tag="DIP1018" FT /product="DEAD-box helicase" FT /note="Similar to Mycobacterium tuberculosis cold-shock FT DEAD-box protein A homolog DeaD or CsdA or Rv1253 or MT1292 FT or MTCY50.29c SW:DEAD_MYCTU (Q11039) (563 aa) fasta scores: FT E(): 1.4e-97, 59.85% id in 563 aa, and to Escherichia coli FT cold-shock DEAD-box protein A DeaD or CsdA or MssB or B3162 FT SW:DEAD_ECOLI (P23304) (628 aa) fasta scores: E(): 7e-97, FT 50.32% id in 622 aa" FT /protein_id="CAE49539.1" FT /translation="MSITDNATSGENELDIKILSESQDNSQVDEGTTINNDVVADVDDS FT RVANTSEATDSAQQEADSAEKDGFEALGLPDAILKAVAKVGFETPSPIQAQTIPVLMQG FT HDVMGLAQTGTGKTAAFALPILSRIDVKKRHPQALILAPTRELALQVADSFQSFADHLG FT DIHVLPIYGGQAYGIQLSGLRRGAQIIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEM FT LNMGFQEDVERILEDTPEDKQVALFSATMPNGIRRLSRDYMKDPHEIQVKSQTRTNTNI FT TQRYLNVAHRNKLDALTRILEVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDI FT AQAQRERTVDQLKDGRLDILVATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGR FT AGRSGEAILFVTPRERRMLRSIERATNAKLIEMDLPTVDEVNESRKAKFADSITESLED FT DQVAIFRSLIKSYAEEHDVPLEDIAAALATQARAGSEFLMKEPPPEKRRERRDRDDRRG FT GRDRFDRDDRRGGRDRGSRFERNDDMQLYRLAVGKRQHVRPGAIVGALANEGGLSNKDF FT GRINIFVDHTLVELPKNMDPSVIDRLSDTRISGQLIHIEKDNGRPPRRNDDGDRGGYRG FT GDRFDRDDRRGGRGGRDRGGYRGGRDRNDRGDRGGYRGGRGGYRD" FT misc_feature 993743..994357 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 993761..994357 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 993836..993859 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 993917..994738 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 994148..994174 FT /note="ScanRegExp hit to PS00039, DEAD-box subfamily FT ATP-dependent helicases signature." FT misc_feature 994463..994708 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature 995021..995542 FT /note="ProfileScan hit to PS50323, Arginine-rich region." FT misc_feature 995387..995536 FT /note="ProfileScan hit to PS50315, Glycine-rich region." FT CDS 995636..996046 FT /transl_table=11 FT /locus_tag="DIP1019" FT /product="Putative exported protein" FT /note="no database matches" FT /protein_id="CAE49540.1" FT /translation="MERNIFAVISVFIAFLALGVTMVWLLQHDPLEQALKGKESPVTVT FT VHDVYDGEWVSVSSVCPYEDREAAADRLGMEDLNIPEQGAKDSENFIVMHAANGEYETH FT KYKRSAMDLCTHPFDHVDALTLTSTPAGWEVQ" FT misc_feature 995636..995746 FT /note="Signal peptide predicted for DIP1019 by SignalP 2.0 FT HMM (Signal peptide probability 0.923) with cleavage site FT probability 0.364 between residues 37 and 38" FT stem_loop complement(996118..996160) FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(996175..996639) FT /transl_table=11 FT /locus_tag="DIP1020" FT /product="Conserved hypothetical integral membrane protein" FT /note="Similar to Streptomyces coelicolor putative integral FT membrane protein scf42.06C TR:Q9L2K7 (EMBL:AL137165) (164 FT aa) fasta scores: E(): 0.0052, 31.54% id in 168 aa, and to FT Rhizobium meliloti hypothetical transmembrane protein FT Smc01456 smc01456 TR:CAC46718 (EMBL:AL591789) (144 aa) FT fasta scores: E(): 0.27, 23.61% id in 144 aa" FT /protein_id="CAE49541.1" FT /translation="MNSVLILLHVLTAILFLGPVTVAVSRAFAAHNGNETAKGAAAVLY FT KITQTYGMLSLLVPLVGFAVMFTNDSYWSNGVYHASMALSVIAWALLIFVIMPKQKKMM FT GNLGLLEADEQAEGGFEIADWKKAKGQLSMFGGLFSLIWVIVAILMVVIK" FT misc_feature complement(order(996181..996246,996346..996411, FT 996433..996498,996559..996624)) FT /note="4 probable transmembrane helices predicted for FT DIP1020 by TMHMM2.0" FT CDS complement(996688..997278) FT /transl_table=11 FT /locus_tag="DIP1021" FT /product="Putative exported protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 25.9 kDa protein Rv2972c or MTCY349.15 TR:P95123 FT (EMBL:Z83018) (237 aa) fasta scores: E(): 1.3e-16, 34.7% id FT in 170 aa, and to Streptomyces coelicolor putative secreted FT protein scp1.323c or scp1.31 TR:Q99QB5 (EMBL:AL590464) (219 FT aa) fasta scores: E(): 2.2e-13, 35.18% id in 162 aa" FT /protein_id="CAE49542.1" FT /translation="MKRIFFTLLVAMTCFAVYLSIPHGWYFHDLREVSHRVTVIGYERS FT QFGDGWALQSSGCSTRDEVLAATLIDAHLTVDCSLTRGYGDDPYSLRPIAVHPGRDREP FT IELDHVYPLSAAWDMGAFAWDKERRIAFANDPLNLVAASKQQNRQKSDKLPSEWLPSAR FT KQRCWYVNRLADVARKYDLPLSSADLRVMRRQC" FT misc_feature complement(997201..997278) FT /note="Signal peptide predicted for DIP1021 by SignalP 2.0 FT HMM (Signal peptide probability 0.845) with cleavage site FT probability 0.342 between residues 26 and 27" FT CDS complement(997318..998883) FT /transl_table=11 FT /gene="putP" FT /locus_tag="DIP1022" FT /product="sodium/proline symporter" FT /note="Similar to Corynebacterium glutamicum proline FT transport system putP TR:O32355 (EMBL:Y09163) (524 aa) FT fasta scores: E(): 2.3e-143, 69.23% id in 520 aa, and to FT Escherichia coli sodium/proline symporter putP or B1015 FT SW:PUTP_ECOLI (P07117) (502 aa) fasta scores: E(): 2.2e-41, FT 45.69% id in 499 aa" FT /protein_id="CAE49543.1" FT /translation="MTEHTWFIVAIIIYMAVMLAIGYWSYRKTDQYDDYVLAGRDLNPF FT VAALSAGASDMSGWLLMGLPGALFVTGMSELWIAVGLLIGAWANWRWVAPRLRSYSEVA FT QNSITLPSFFENRLEDSSRILRIVSSLIIIVFFTFYVSSGMVSGGRYFESTFGGAYLDG FT MLIVACITVIYTFIGGFLAVSYTDAVQGSIMFVSLVLVPVAALLYLDDPSSIWTWATSH FT DYGPYMDGVGNPHYFSMISGVSVAAVIGNLAWGLGYFGQPHIIVRFMALRKPSDASQAR FT WIGTAWMLLSILGATFTAIIGTAFFGQNPHVEVVDKKAYETIFLDMGRVLFHPLIGGLI FT LTAVLAAIMSTIASQLLVTSTSLIEDLFKAFKKNLPSETVMINLSRTAVMAVAIVAGVL FT AIDPQDSILNLVGFAWAGFGSAFGPLVLLTLYWKRLNFAGAISGMVTGAVVSFAWGMSP FT LGDSLYEIVPGFFSGLFVMVVVSLATPAPPASVRSAFDRATKLTKVSQAHPELEVSEVQ FT EKLL" FT misc_feature complement(order(997411..997476,997522..997578, FT 997600..997665,997681..997746,997810..997875, FT 997978..998043,998107..998172,998257..998307, FT 998329..998394,998440..998505,998620..998685, FT 998806..998862)) FT /note="12 probable transmembrane helices predicted for FT DIP1022 by TMHMM2.0" FT misc_feature complement(997501..998874) FT /note="ProfileScan hit to PS50283, Sodium:solute symporter FT family profile." FT misc_feature complement(997537..997599) FT /note="ScanRegExp hit to PS00457, Sodium:solute symporter FT family signature 2." FT misc_feature complement(997543..998781) FT /note="HMMPfam hit to PF00474, Sodium:solute symporter FT family" FT CDS 999109..1002198 FT /transl_table=11 FT /locus_tag="DIP1023" FT /product="SNF2/RAD54 family protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT helicase, SNF2/RAD54 family MT2161 TR:AAK46443 FT (EMBL:AE007065) (954 aa) fasta scores: E(): 7.8e-94, 38.56% FT id in 1006 aa, and to Synechocystis sp helicase of the FT SNF2/RAD54 family SLL1366 TR:P74552 (EMBL:D90916) (1039 aa) FT fasta scores: E(): 1.9e-83, 34.17% id in 986 aa" FT /protein_id="CAE49544.1" FT /translation="MSTHLLHALWLKNSGLHLWIEQVEGHKIVLSDAVPDNTFPDSVAT FT LIRGKRFTHQVKTKLLTPKGREVTLQLPTIAFTPEQAVRVLSQIAAITPMMASSAQRAT FT LAPDLMWMVRLYQGLEQFVRAGRLTIKLGYADHQWWPTWQLSSGLQERGWIAQMTAAAP FT GVLIANAGSSVAEDIADELPHWIANFLLQDLLDTPRSSEWHSFPEALMRSTPLRRGTAQ FT LVSALNEWRDSMTSVSVQLVFIVEEPSKDREDRIDPADMLWPIRVRVRSGVDSPQPIML FT SHYDSATKERLNALRREAILVAPILEKQGTDSNVTPTQLFELQREEGAGDWDCYVTTDQ FT LVEFIGDAAARLKSRGFNVLLPRSWDQQETKAHLRLSDPAEASTQATIGLDKIVDYDWH FT MSVGDIELTEAEMVELVRSKSGLIHLRGEWVMADTAAIRRIGDYMKDVAAQSRKRKKQA FT LDTAVMEAELAKANDDPRWPMLEARAEKLAEEFNNEFAEFGQVTLAELRELALKAQENE FT PIAYTGSPWHASLAGGSMGKDSPAPQRVSIPDTVHADLREYQRRGVDWLYWMAHNHLGA FT VLADDMGLGKTLQLLSLEAVERSEQQRGPTLVIAPTSVVGNWAREAHKFVPTMRVAVHH FT GTSRKADDEFIQLAQSRDVIVTSYGTAARDFELLGKITWRRVVLDEAQHIKNSETKVSK FT AVRSLPSEHRVALTGTPVENRLSEMRSILDFCNPGVLGSASFFRNHFARAIEREHDEDM FT TERLRALTAPFILRRLKTDSAIVDDLPAKTETVLTVDMTSEQAALYKAYVDSVKTQLDQ FT AEGMNKRGLVLSALTKIKQICNHPAHFLGDGSAMTIKGKHRSGKVAELMNLINDAVDSD FT QKLLIFTQYRAFGDLLVPYLSDYFGTTIPFLHGGVSKTGRDRMVEEFQTPDGPPAMILS FT LKAGGTGLNLTNASIVVHMDRWWNPAVENQATDRAFRIGQRKDVTVYKMITAGTLEESI FT QDILDGKTQLASAVVSEGEGWLTELSAEELAMLMSYRGRE" FT misc_feature 1000759..1001331 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 1000780..1001625 FT /note="HMMPfam hit to PF00176, SNF2 and others N-terminal FT domain" FT misc_feature 1001761..1002015 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT CDS 1002199..1003020 FT /transl_table=11 FT /locus_tag="DIP1024" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 59.8 FT kDa protein orfZ TR:O86854 (EMBL:AJ007731) (566 aa) fasta FT scores: E(): 1.2e-07, 31.21% id in 189 aa, and to FT Sulfolobus solfataricus hypothetical protein Sso1656 FT sso1656 TR:Q97XQ4 (EMBL:AE006779) (217 aa) fasta scores: FT E(): 1.1e-06, 25.11% id in 211 aa" FT /protein_id="CAE49545.1" FT /translation="MAQQETPQDKRRRHARVDNVIYANFGAKTTVRTEPEAPEIVESRN FT FSPVALRIRDLATQEADAGRLKRGRDYARSGHVLNVKFGNSLITADVAGSQNLPFQVSI FT AFPYLSTDGLSQITQYIAASPDGLNAARHGQLSEDILDLLLGTQVTFRCDCPDHVVCCK FT HSVAVVTVASEKVEADPLLAFRLRGLDLAQLEQAVTMQARAASTQDLKERFWQGRDLPS FT LPEPKIAPALDDSDASLLHKAMRLVSYTNIDELRAVSDIEDIYYHLTHEKG" FT CDS 1003052..1004173 FT /transl_table=11 FT /locus_tag="DIP1025" FT /product="Putative exonuclease, SbcD-family" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT exonuclease SbcD-related protein MT1314 TR:AAK45575 FT (EMBL:AE007006) (417 aa) fasta scores: E(): 3e-43, 40.1% id FT in 384 aa, and to Bacillus subtilis exonuclease SbcD FT homolog SW:SBCD_BACSU (P23479) (325 aa) fasta scores: E(): FT 1.6, 27.13% id in 258 aa" FT /protein_id="CAE49546.1" FT /translation="MTVRFLHTSDLQIGMIRRFLDSDAQARFDAHRIAAITKLGEIAAQ FT HDCEFIVMAGDIFEHNSLKPATFGRAMEALKKVPVPVYLLPGNHDPLTADSQLARTEVL FT DHVHVISHSEPIVIRPGVELVGAPLTAKTATRDLVRLALEPLSPAGTTTRIAVGHGQTL FT ARDNEMKPDVIDLAFVEQRISEGVIDYLALGDTHSTESLGSTGQVWYSGAPETTDFVEF FT PSGGGEIDSGNALMVAIEDHQVFVEKVPVGKWTFEAVTWDINSFDDAQAFISHLTAYSE FT KENTVVKYALRGTVSMRTMQYLETECEKLRPIFAALYERRRLMDLHLEPREDELDQLGL FT SGFAQQTLHELVDRDDPVAHDALKLLFRLAKED" FT misc_feature 1003058..1003657 FT /note="ProfileScan hit to PS50185, Metallo-phosphoesterase FT motif." FT misc_feature 1003058..1003783 FT /note="HMMPfam hit to PF02549, DNA repair exonuclease" FT CDS 1004173..1006737 FT /transl_table=11 FT /locus_tag="DIP1026" FT /product="Conserved hypothetical ATP-binding protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML1120 TR:Q9CC83 (EMBL:AL583920) (873 aa) fasta scores: FT E(): 1.9e-14, 28.49% id in 888 aa, and to Mycobacterium FT tuberculosis hypothetical 93.4 kDa protein Rv1278 or MT1315 FT or MTCY50.04c SW:YC78_MYCTU (Q11042) (875 aa) fasta scores: FT E(): 3.3e-13, 29% id in 893 aa. Contains coiled-coil FT domains, and thus some probably non-specific similarity to FT e.g. Drosophila melanogaster myosin heavy chain, non-muscle FT zip SW:MYSN_DROME (Q99323) (2017 aa) fasta scores: E(): FT 5.7e-07, 23.06% id in 568 aa" FT /protein_id="CAE49547.1" FT /translation="MRIRSLEIEHMRAITHLVLKDLPSNGVIVISGENERGKSTIMEAI FT KLVLGEKHDTNKQSVKAIQPKGHDVGTRICLEADLGPVRFRVSKVFNKKKSCELTIFEP FT KPANYTGKEANSQLSGLLDAHLDHDLFSALFVEQGDITSMLSAAGISSVTQALGGATDH FT ASNEDNALILTVEKEKDRYFTKSGATKKGGELGIAETAVAEAEQAVLAATQQKETLDRR FT VESVAGFQRDRDQAQQDLPNARDTLTTREQELKTAELAAQQLENASAQLKIAQDQERIL FT QSDIDAREELRKEQSRLSEALQIRIQEELDLKEKTDSLSEAREKLRSQHEKARADAEKM FT RQRLEKLKESLRLDTLRTSYQELLTVSKQLEELRTVPEVTGAQLSAAEEANDRAKAAAY FT VVEAHAATMLINAAQPVTIQIDGEAVALNDTEWTTRITSELTAVIGDVSLTIEPGEQGE FT QLEQKRAETQETLRAALGDAKDIATLRLQREAWVDAEKELQSLNKRKNEIAMRFGDKAD FT LERDIADAELQVAELDIQESDDLQQLIDDAEKEYLQYQQDADAYQKELGAWDSNDIQVR FT YATVKARVEAERENLDRCDQKIKAQEEQRPLEVLHSELHNVTAELKRQQDHLAELRETD FT NLQVAKDLYAGAAARVESLENTIRDCEANLKALQTQIDYAAGAAEQLDVALAQRDVALR FT VLEAVHHRAQAAMLLYTTLIRHRDIARQKYAAPFTQRLTEFAAPVFGKGVGFELGSDLS FT VVKRTMKEQTVGVDELSGGAQEQLSIVQRFAVADLASQGGETVPVFIDDALGSTDSNRL FT EMMATLFSRQGHNQQVFVLTCMPQRYDYVAGKHELRISDLMQ" FT misc_feature 1004266..1004289 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT stem_loop 1006742..1006786 FT /note="Score 57: 19/19 (100%) matches, 0 gaps" FT CDS complement(1006815..1007345) FT /transl_table=11 FT /locus_tag="DIP1027" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 20.0 FT kDa protein SC1C2.14C TR:O86515 (EMBL:AL031124) (185 aa) FT fasta scores: E(): 1e-29, 48.04% id in 179 aa, and to FT Thermoplasma volcanium hypothetical protein Tvg0219791 FT TR:BAB59353 (EMBL:AP000991) (177 aa) fasta scores: E(): FT 2.4e-28, 50.93% id in 161 aa" FT /protein_id="CAE49548.1" FT /translation="MHNLNGTYVLDPAHSVIGFIARHAMVTKVRGNFGDFDATFTINDE FT DVQASATIKSASITTGNADRDAHVRGDDFFSTEAFPELTFTATDAIIKDEDSAKVTGDL FT TIKGVTKTVVLDVDIEGIAEDPFGNVRLGFEAKTKINRRDFGINFNAPLNTGGMLVSDE FT IKIEIEGSAIKQA" FT CDS 1007587..1008069 FT /transl_table=11 FT /locus_tag="DIP1028" FT /product="Putative MarR-family transcriptional regulator" FT /note="Similar to Streptomyces coelicolor putative FT MarR-family transcriptional repressor SCE22.22 TR:Q9KYU1 FT (EMBL:AL355832) (163 aa) fasta scores: E(): 3.5e-17, 37.06% FT id in 143 aa, and to Escherichia coli transcriptional FT repressor MprA EmrR or B2684 or Z3985 or ECS3546 FT SW:MPRA_ECOLI (P24201) (176 aa) fasta scores: E(): 0.0011, FT 24.79% id in 121 aa" FT /protein_id="CAE49549.1" FT /translation="MTTPRWLTQDEQSLWRLFLAMERKVTRGIDEELQSSQGLTTPEFS FT VLVSLSERPGHEIRLRDLCESLQWDRSRTSHQITRMQRRGLVTKTKCSDDARGVFVELT FT PEGEKRLREAAPGHVDVVRKLIFDVMTEEEAAVLRGYFQKVIDVQCGASTGNPLDD" FT misc_feature 1007680..1007991 FT /note="HMMSmart hit to SM00347, helix_turn_helix multiple FT antibiotic resistance protein, DNA-binding" FT misc_feature 1007701..1008021 FT /note="HMMPfam hit to PF01047, MarR family" FT CDS 1008175..1008375 FT /transl_table=11 FT /locus_tag="DIP1029" FT /product="Conserved hypothetical membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein 2SCK8.29C TR:Q9AK23 (EMBL:AL589164) (67 aa) fasta FT scores: E(): 1.6e-05, 37.03% id in 54 aa, and to Thermotoga FT maritima conserved hypothetical protein TM1156 TR:Q9X0P0 FT (EMBL:AE001773) (129 aa) fasta scores: E(): 0.00055, 37.5% FT id in 56 aa" FT /protein_id="CAE49550.1" FT /translation="MNFSNSLNRPLARSNSQQWVGGVLSGIGETYNINIALLRVLFVCS FT ILLPGPQVILYVIAWLIMPRR" FT misc_feature 1008292..1008360 FT /note="1 probable transmembrane helix predicted for DIP1029 FT by TMHMM2.0" FT stem_loop complement(1008473..1008511) FT /note="Score 50: 18/19 (94%) matches, 0 gaps" FT tRNA complement(1008521..1008593) FT /gene="tRNA-Arg" FT /product="transfer RNA-Arg" FT /anticodon=(pos:1008558..1008560,aa:Arg) FT /note="tRNA Arg anticodon CCG, Cove score 76.31" FT CDS complement(1008712..1009341) FT /transl_table=11 FT /locus_tag="DIP1030" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 23.2 FT kDa protein SCF43A.07 TR:Q9XAA8 (EMBL:AL096837) (215 aa) FT fasta scores: E(): 3.3e-26, 44.65% id in 215 aa, and to FT Deinococcus radiodurans conserved hypothetical protein FT DR1909 TR:Q9RT57 (EMBL:AE002030) (212 aa) fasta scores: FT E(): 7.8e-17, 37.44% id in 211 aa" FT /protein_id="CAE49551.1" FT /translation="MDAKTEILERIRNANKLAKAPEGAYPVVREYITNTDMPREELKEL FT LVDRLLDYKAQVVECTDAELNDTVAKILNDRDAKDIRFAPGLDTALFESFNGTATPDSA FT DVDPRTLNDVDAVVTDSHVTSAQAGTICLVSNEVCGRRALTLVPDCHVCIVRMDNVVYG FT VPEMVSRLDHTRPNTMISGPSATSDIELNRVEGVHGPRTLICVVVS" FT misc_feature complement(1008718..1009098) FT /note="HMMPfam hit to PF02589, Uncharacterized ACR, YkgG FT family COG1556" FT misc_feature complement(1009201..1009230) FT /note="ScanRegExp hit to PS00215, Mitochondrial energy FT transfer proteins signature." FT CDS complement(1009343..1010860) FT /transl_table=11 FT /locus_tag="DIP1031" FT /product="Putative iron-sulfur protein" FT /note="Similar to Streptomyces coelicolor putative FT iron-sulfur protein SCF43A.06 TR:Q9XAA9 (EMBL:AL096837) FT (492 aa) fasta scores: E(): 9.1e-97, 57.35% id in 483 aa, FT and to Escherichia coli putative electron transport protein FT YkgF or B0307 SW:YKGF_ECOLI (P77536) (475 aa) fasta scores: FT E(): 5.4e-64, 39.41% id in 482 aa" FT /protein_id="CAE49552.1" FT /translation="MPPRASERSQLRGDENFVHAAHHELYNATQRRNLTKATTTIRTKR FT LNVTAEMPDWEAVREAGSGIKRDVGQRLDELLVQFEEAVTARGGHVHWARDAKEAGDIV FT TKLVEETGEKNVVKIKSMATMEIDLNNRLREAGISARETDLAELIVQLGKDKPSHILVP FT AIHRNRAEIRDIFIREMPNTDDSLSSEPAELAEASRSFLREQFMKAKVAISGANFGIAE FT TGTVTIMESEGNGRMCLTLPETLISVMGIEKIIPTFQDLEVFLQLLPRSSTGERQAPYV FT STWSGVTEGDGPKNFHIVLVDNGRTAVLSDEIGREALKCIRCSACLNVCPVYERAGGHA FT YGSTYPGPIGAILSPQMTGIKNKHDPNAYLPYASSLCGRCNEVCPVKIPFTDILLELRH FT KKIQTDAPKIEKAMMGAMQLAWGNSTMWNMITRMVFMGRIMGGSNGKITHLPSFLAGWT FT DVRDTAVPPKKSFRQWFETEEAQQLLADARRDGIHPNNPEVNQKKEN" FT misc_feature complement(1009868..1009903) FT /note="ScanRegExp hit to PS00198, 4Fe-4S ferredoxins, FT iron-sulfur binding region signature." FT CDS complement(1010884..1011669) FT /transl_table=11 FT /locus_tag="DIP1032" FT /product="Putative oxididoreductase subunit" FT /note="Similar to C-terminus of e.g. Escherichia coli FT anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC FT or B2243 or Z3501 or ECS3128 SW:GLPC_ECOLI (P13034) (396 FT aa) fasta scores: E(): 2.8e-11, 27.71% id in 249 aa, and to FT C-terminus of Escherichia coli glycolate oxidase FT iron-sulfur subunit GlcF or gox or B2978 SW:GLCF_ECOLI FT (P52074) (407 aa) fasta scores: E(): 9.8e-10, 23.27% id in FT 232 aa" FT /protein_id="CAE49553.1" FT /translation="MRVALFSTCIGDAMFPDASKATALVLSRLGYEVVFPKGQTCCGQM FT HVNTGYQKEAIPLIKNYVDAFADDSIDYVVAPSGSCVGAVREQHEHIADRYGNAALKDG FT AHIAAKKSLDLSEFLIDVAGVEDVGAFFPHKVTYHPSCHGLRFIGLGDRPYRLLQNVAG FT MELIELPNKEECCGFGGTFSLKNAETSAAMVSDKTRNIELTGAEYITGGDSSCLMNIAG FT NLSRKHVGIRAIHMAEILASTKENPWTPTTAAYSREVML" FT misc_feature complement(1011007..1011195) FT /note="HMMPfam hit to PF02754, Domain of unknown function FT (DUF224)" FT misc_feature complement(1011412..1011594) FT /note="HMMPfam hit to PF02754, Domain of unknown function FT (DUF224)" FT CDS 1012107..1013765 FT /transl_table=11 FT /locus_tag="DIP1033" FT /product="Putative L-lactate permease" FT /note="Similar to Escherichia coli L-lactate permease LldP FT or LctP or B3603 SW:LLDP_ECOLI (P33231) (551 aa) fasta FT scores: E(): 1e-58, 36.28% id in 554 aa" FT /protein_id="CAE49554.1" FT /translation="MFTPVIDTVGGSLGLSALCAILPLIGFFIFLMVLKMKAHWAALSS FT VGVALLVGIFLFKMPANLALLSFAEGVAFGLFPIVYVIWMAVWIYDLTVKSGRFEDLRT FT IFSKIGRGDMRVQAMLIGFAFGGLLEALAGFGAPIAIVAAMLLAIGLKPMKAVLVTFVA FT NCAPVAFGAMGIPVTTGGLLTQIPGEQVAAMAGRQVSLIALIVPFILALIMDGTRGVRQ FT TWPMALLLGITFGGGQFLASNYFSYVLTDVVACLLSLICGVAFLRVWKPKTPEDQASEI FT DASTIHLSADRAFLALFPYLLVVVVFSITSLWKIGVNIPAALKSTDIKVQWPGLHGHLV FT NQAGEPIPNTIFNFNWLSTPGTILFFCGLITVLVYSAAAKNSNGAYPMSFKAGFSQLAE FT GAYKMRFSALTIAAVMGLAYVMNLSGQTASIGAFLAATGTIFPLLSPLLGWIGTWVTGS FT ATSANALFAQMQSTTATQVSVSPTLLVGANTAGATLGKMMSPQTLTIAANAVNMENGER FT KIMAQAWKYSLGLLVYICIIAYLQSTPILGWMVVG" FT misc_feature order(1012140..1012208,1012218..1012277,1012296..1012364, FT 1012488..1012556,1012575..1012643,1012686..1012745, FT 1012764..1012832,1012845..1012913,1012983..1013051, FT 1013172..1013240,1013322..1013381,1013394..1013462, FT 1013688..1013756) FT /note="13 probable transmembrane helices predicted for FT DIP1033 by TMHMM2.0" FT misc_feature 1012149..1013729 FT /note="HMMPfam hit to PF02652, L-lactate permease" FT CDS 1013777..1015429 FT /transl_table=11 FT /gene="argS" FT /locus_tag="DIP1034" FT /product="arginyl-tRNA synthetase" FT /EC_number="6.1.1.19" FT /note="Similar to Mycobacterium tuberculosis arginyl-tRNA FT synthetase ArgS or Rv1292 or MT1331 or MTCY373.12 FT SW:SYR_MYCTU (Q10609) (550 aa) fasta scores: E(): 4.5e-144, FT 65.63% id in 550 aa, and to Bacillus subtilis arginyl-tRNA FT synthetase ArgS SW:SYR_BACSU (P46906) (556 aa) fasta FT scores: E(): 1.7e-82, 42.75% id in 545 aa" FT /protein_id="CAE49555.1" FT /translation="MTPADLSQLIKQTAIDVLSARELDTTVLPETVVVERPRNPEHGDY FT ATNVALQIAKKVGMNPRELGQVLADSLAANTAIDEASIAGPGFINIRLAAAAQGEIVAK FT ILEAGATFGHSDLYQGRRVNLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTR FT EYYFNDHGRQIDRFTNSLVASAKGEPTPEDGYGGDYIKEIADAVVAQHPDVLALAEADL FT NERFRATGVEMMFAHIKESLHEFGTDFDVYFHENSLFESGAVDKAIQTLKDNGNLYFNE FT GAWWLKSSEYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLCIYMLGADHHGYIS FT RLRAAAAAMGYEPSNVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGIDGARY FT SMIRSSVDSSLDIDLQLWEQQSSDNPVYYVQYGHARLCSIARKAADLGITAIDPDLSLL FT THDREGDLIRTLGEFPAVVKAAAELREPHRIARFAEDLAGTFHRFYDSCQILPKVGESA FT EPIHTARLALANATRQVLANALRLVGVSAPERM" FT misc_feature 1013786..1015426 FT /note="HMMPfam hit to PF00750, tRNA synthetases class I FT (R)" FT misc_feature 1014140..1014187 FT /note="FPrintScan hit to PR01038, Arginyl-tRNA synthetase FT signature" FT misc_feature 1014170..1014199 FT /note="ScanRegExp hit to PS00178, Aminoacyl-transfer RNA FT synthetases class-I signature." FT misc_feature 1014185..1014235 FT /note="FPrintScan hit to PR01038, Arginyl-tRNA synthetase FT signature" FT misc_feature 1014257..1014298 FT /note="FPrintScan hit to PR01038, Arginyl-tRNA synthetase FT signature" FT misc_feature 1014668..1014733 FT /note="FPrintScan hit to PR01038, Arginyl-tRNA synthetase FT signature" FT CDS 1015432..1016760 FT /transl_table=11 FT /gene="lysA" FT /locus_tag="DIP1035" FT /product="diaminopimelate decarboxylase" FT /EC_number="4.1.1.20" FT /note="Similar to Corynebacterium glutamicum FT diaminopimelate decarboxylase LysA SW:DCDA_CORGL (P09890) FT (445 aa) fasta scores: E(): 2.8e-119, 70.61% id in 439 aa, FT and to Bacillus subtilis diaminopimelate decarboxylase LysA FT or Lys SW:DCDA_BACSU (P23630) (441 aa) fasta scores: E(): FT 3e-67, 43.76% id in 425 aa" FT /protein_id="CAE49556.1" FT /translation="MDFNALPSHVWPRHAAREAGGDVSVAGVSLVSIAQEYGTPVFVVD FT EADFRSRCRDMAAAFGGADKVHYASKAFLTRRIARWVEEEGLSLDIASHGELQVALRAG FT FPSQRITAHGNNKDRAFLQALVDARVGHVVIDSMVELERLEEIAGAAGIQQPVMVRVKP FT GIEAHTHEFIATSHEDQKFGFSLASGSAYAAAARAISSESLYLIGLHCHVGSQVFDAQG FT FSLAAQRVLDLYSRIHRELGVDLEQLDLGGGYGIAYTEDETPLDVAAVAQDLLKAVQSA FT ADEIGISAPEILVEPGRAIAGPSTVTVYEVGTVKDVHVTDRQTRRYLAVDGGMSDNIRP FT ALYEAEYDARVINRNITGTPISSRVVGSHCESGDILINDAMLPDDIREGDLLALAATGA FT YCFAMSSRYNMMGRPAVVSVLDGQASVMVKRENIDDLLQLDVP" FT misc_feature 1015564..1016340 FT /note="HMMPfam hit to PF02784, Pyridoxal-dependent FT decarboxylase, pyridoxal binding domain" FT misc_feature 1015633..1015689 FT /note="FPrintScan hit to PR01179, FT Ornithine/diaminopimelate/arginine (ODA) decarboxylase FT family signature" FT /note="ScanRegExp hit to PS00878, Orn/DAP/Arg FT decarboxylases family 2 pyridoxal-P attachment site." FT misc_feature 1015687..1015740 FT /note="FPrintScan hit to PR01181, Diaminopimelate FT decarboxylase signature" FT misc_feature 1015693..1015731 FT /note="FPrintScan hit to PR01179, FT Ornithine/diaminopimelate/arginine (ODA) decarboxylase FT family signature" FT misc_feature 1015954..1015983 FT /note="FPrintScan hit to PR01181, Diaminopimelate FT decarboxylase signature" FT misc_feature 1016038..1016079 FT /note="FPrintScan hit to PR01179, FT Ornithine/diaminopimelate/arginine (ODA) decarboxylase FT family signature" FT misc_feature 1016155..1016196 FT /note="ScanRegExp hit to PS00879, Orn/DAP/Arg FT decarboxylases family 2 signature 2." FT misc_feature 1016305..1016364 FT /note="FPrintScan hit to PR01179, FT Ornithine/diaminopimelate/arginine (ODA) decarboxylase FT family signature" FT misc_feature 1016347..1016691 FT /note="HMMPfam hit to PF00278, Pyridoxal-dependent FT decarboxylase, C-terminal sheet domain" FT misc_feature 1016404..1016460 FT /note="FPrintScan hit to PR01181, Diaminopimelate FT decarboxylase signature" FT misc_feature 1016623..1016664 FT /note="FPrintScan hit to PR01179, FT Ornithine/diaminopimelate/arginine (ODA) decarboxylase FT family signature" FT misc_feature 1016653..1016721 FT /note="FPrintScan hit to PR01181, Diaminopimelate FT decarboxylase signature" FT CDS 1016931..1018277 FT /transl_table=11 FT /gene="thrA" FT /gene_synonym="hom" FT /locus_tag="DIP1036" FT /product="homoserine dehydrogenase" FT /EC_number="1.1.1.3" FT /note="Similar to Corynebacterium glutamicum homoserine FT dehydrogenase Hom or ThrA SW:DHOM_CORGL (P08499) (445 aa) FT fasta scores: E(): 4.2e-117, 75.28% id in 437 aa, and to FT Bacillus subtilis homoserine dehydrogenase Hom or Tdm FT SW:DHOM_BACSU (P19582) (433 aa) fasta scores: E(): 4.2e-54, FT 40.18% id in 433 aa" FT /protein_id="CAE49557.1" FT /translation="MNPDSQHHATFNPGKGEGSPVGIAILGYGTVGSQVLRLLTENHND FT FQHRAGGPLEIKGVAASSVEKHRGSLADQLGLLTDDARSLIARDDVDIVVEVIGGIDYP FT RELILEALHSGKSVVTANKALVAAHSEELAAAADEAGVDLYFEAAVAAAIPVLGPLRRS FT LAGDQIQSVAGIVNGTTNFILDAMDSTGASYDDMLAEATRLGYAEADPTADVEGHDAAS FT KAAILASLAFHTRVTYADVYCEGISKITADDINAAKEAGFTIKLLAICERLNVDGVEKV FT SARVHPTLVPRNHPLASVDKSFNAIFVEAEAAGRLMFYGNGAGGNPTASAVLGDIVGAA FT RNKVFGGRAPGESTYADLPIAPFGEVPTRFHIDMEVEDRVGVLADLAKTFSNHGISLRT FT VRQAEKDGHARLIVVTHTAKESELEATVEQIKNSDSVKKINSVIRLAGE" FT misc_feature 1017024..1017953 FT /note="HMMPfam hit to PF00742, Homoserine dehydrogenase" FT misc_feature 1017531..1017599 FT /note="ScanRegExp hit to PS01042, Homoserine dehydrogenase FT signature." FT misc_feature 1018038..1018256 FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 1018282..1019208 FT /transl_table=11 FT /gene="thrB" FT /locus_tag="DIP1037" FT /product="homoserine kinase" FT /EC_number="2.7.1.39" FT /note="Similar to Corynebacterium glutamicum homoserine FT kinase ThrB SW:KHSE_CORGL (P07128) (308 aa) fasta scores: FT E(): 7.2e-90, 79.41% id in 306 aa, and to Bacillus subtilis FT homoserine kinase ThrB SW:KHSE_BACSU (P04948) (309 aa) FT fasta scores: E(): 3e-20, 34.58% id in 266 aa" FT /protein_id="CAE49558.1" FT /translation="MAIELPVGKKVTVTVPASSANLGPGFDTLGLALSLYDTVEVEVTD FT HGLEVEVFGEGQGELPLDGSHLVVKAIRAGLKAADVQVPGLRVVCHNNIPQSRGLGSSA FT AAAVAGVAAANGLAGFPLDDARVVQLSSAFEGHPDNAAASVLGNAVVSWTEIPVDGRTE FT PQFKAVTINVDSRIKATALVPDFHASTEAVRRVLPSDVTHLDARFNVSRCAVMTVALQH FT HPELLWEGTRDRLHQPYRADVLPVTAEWVNRLRNRGYAAYLSGAGPTIMVLHTEPVDEA FT VLNDAREAGLRVLSLDVADAVSVKVDA" FT misc_feature 1018333..1018380 FT /note="FPrintScan hit to PR00958, Homoserine kinase FT signature" FT misc_feature 1018498..1018689 FT /note="HMMPfam hit to PF00288, GHMP kinases putative FT ATP-binding protein" FT misc_feature 1018561..1018596 FT /note="ScanRegExp hit to PS00627, GHMP kinases putative FT ATP-binding domain." FT misc_feature 1018582..1018629 FT /note="FPrintScan hit to PR00958, Homoserine kinase FT signature" FT misc_feature 1018684..1018725 FT /note="FPrintScan hit to PR00958, Homoserine kinase FT signature" FT misc_feature 1018822..1018875 FT /note="FPrintScan hit to PR00958, Homoserine kinase FT signature" FT misc_feature 1019053..1019100 FT /note="FPrintScan hit to PR00958, Homoserine kinase FT signature" FT CDS complement(1019270..1021021) FT /transl_table=11 FT /locus_tag="DIP1038" FT /product="Putative fatty acid-CoA ligase" FT /note="Similar to Streptomyces coelicolor putative fatty FT acid CoA ligase 2SC10A7.10 TR:Q9ADP9 (EMBL:AL583945) (558 FT aa) fasta scores: E(): 1.7e-58, 41.4% id in 570 aa, and to FT Mycobacterium tuberculosis fatty acid CoA-ligase FadD14 or FT Rv1058 or MTV017.11 TR:O53406 (EMBL:AL021897) (543 aa) FT fasta scores: E(): 6.3e-56, 40.59% id in 569 aa, and to FT Pseudomonas oleovorans medium-chain-fatty-acid--CoA ligase FT AlkK SW:ALKK_PSEOL (Q00594) (546 aa) fasta scores: E(): FT 4.5e-47, 34.86% id in 565 aa" FT /protein_id="CAE49559.1" FT /translation="MVIIMLSTMQDIPLNLARILTYGATAHADTKITTFDGEVASETTY FT AEIAARAAAFAHALHDELGIDDDQRVGSMMYNCAEHLEVLFAVSCMGAVFNPLNKQLMN FT DQIRHIINHAEDEVIVADQRLAKQLGTILHQGCPSVRAVIFIGTSPITDAATEIPEGIT FT CYSYESLLDGRSTVYEWPQVEETTAAAICYSTGTTGAPKGVAYSHRALYLQALNLRTTD FT SLAVTHGQSFLCCVPIYHILSWCVPIAAFMSGTPLVFPGSSVSAPSLAHIIATAHPRVA FT HGVPTLWIQLMVHYMRHSPERMSLQEIYVGGSAVPAILIKLWEERYGVDVVHVWGMTET FT VAIGTVARPPSGVSGETRLNYRISQGRFPATLEYRVVNDGEIMSSTDRNQGEIQVRGNW FT VTEHYYHSATEDNGGASSMFRDHEVEDAPEQFTEDGWLRTGDVGSVTRDGYLTIHDRAR FT DVIRSGGEWIYSTMLENEIMAATVVVEAAVIGYPDPKWGERPLSVTVLAAGVEPNKETA FT ERLREGLRDTFPNWMLPEYWTFVKSIDKTSVGKFDKIDLRQHLADGDFEIIALKGPGRS FT SHSDSAE" FT misc_feature complement(1019558..1019731) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT misc_feature complement(1019804..1020892) FT /note="HMMPfam hit to PF00501, AMP-binding enzyme" FT misc_feature complement(1020416..1020451) FT /note="ScanRegExp hit to PS00455, Putative AMP-binding FT domain signature." FT CDS 1021371..1023434 FT /transl_table=11 FT /gene="rho" FT /locus_tag="DIP1040" FT /product="transcription termination factor Rho homolog" FT /note="Similar to Mycobacterium tuberculosis transcription FT termination factor Rho homolog Rv1297 or MT1336 or FT MTCY373.17 SW:RHO_MYCTU (Q10607) (602 aa) fasta scores: FT E(): 6.9e-90, 63.04% id in 552 aa, and to Escherichia coli FT transcription termination factor Rho SW:RHO_ECOLI (P03002) FT (419 aa) fasta scores: E(): 1.7e-53, 54.76% id in 378 aa" FT /protein_id="CAE49560.1" FT /translation="MTNTDNSAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAIN FT GTSAAHPTSVAPSEENKADAPKKERPARRRATKHVAQDAGSEPAPVVTEVAAPAEQNPA FT PKQEKEAPAGESERQPRRRRAVKTSVKTTQEEPTEVRVAEAAEATDKSSEEQSAEAGSE FT DKDNYHYESRSAARRARRNRARREQREYNRPGTKDESEASQPENENSRNDVAPESSKVA FT DNSNEQARSDQADQPTKSDSNDNGREDNRRGNRHERGERGDRGDRNRRNRRNRRGRDRD FT DNRDNRENNNNEPREDEVLQNVAGILDIVDNNVAFVRTSGYHAGAADVYVNNQMIRRLG FT LRSGDAIVGQVRMNGENNHGGHNRGRNRQKYNPLVRVDSVNGMTVEEAKARPEFAKLTP FT LYPNQRLRLETEPKVLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAIATNNP FT ECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQD FT VVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIAT FT AMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLAPEEA FT RIMHKLRRMLSALDNQQAIDLLIKQLKKTKSNGEFLMQVASSAPMAADAEED" FT misc_feature 1022109..1022231 FT /note="ProfileScan hit to PS50323, Arginine-rich region." FT misc_feature 1022349..1023257 FT /note="HMMPfam hit to PF00006, ATP synthase alpha/beta FT family, nucleotide-binding domain" FT misc_feature 1022652..1023209 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT CDS 1023434..1024504 FT /transl_table=11 FT /gene="prfA" FT /locus_tag="DIP1041" FT /product="peptide chain release factor 1 (RF-1)" FT /note="Similar to Mycobacterium tuberculosis peptide chain FT release factor 1 (RF-1) PrfA or Rv1299 or MT1338 or FT MTCY373.19 SW:RF1_MYCTU (Q10605) (357 aa) fasta scores: FT E(): 1.4e-81, 64.4% id in 354 aa, and to Bacillus subtilis FT peptide chain release factor 1 PrfA SW:RF1_BACSU (P45872) FT (356 aa) fasta scores: E(): 2.1e-50, 46.15% id in 351 aa" FT /protein_id="CAE49561.1" FT /translation="MSQVSAVDDIVSEYQGIEAQMSDPETMGDQTLFRKLSKRYSELQP FT IINVNNKLVQARDDHEAAEEMAYEDKEFAAEAERLAEEIVSLEEQLADLLAPRDPHDGD FT DIVMEVKAGAGGEEAALFAGELVRMYQRYAEKHGFTVEVLGLSESDLGGVKDMTLSIRS FT KTPSRDGAWSVFKFEGGVHRVQRVPVTESQGRIQTSAAGVLVYPEPDEVAEVEIDDKDL FT RVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAM FT AEEQAEAEAAEGRAAQIRTMDRSERIRTYNWPENRISDHRIGYKANNLDSVLNGDLDDL FT FSALQAAERAERLEAE" FT misc_feature 1024055..1024396 FT /note="HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase FT domain" FT misc_feature 1024115..1024165 FT /note="ScanRegExp hit to PS00745, Prokaryotic-type class I FT peptide chain release factors signature." FT CDS 1024509..1025327 FT /transl_table=11 FT /locus_tag="DIP1042" FT /product="HemK-family methytransferase" FT /note="Similar to Mycobacterium tuberculosis HemK protein FT homolog HemK or Rv1300 or MT1339 or MTCY373.20 FT SW:HEMK_MYCTU (Q10602) (304 aa) fasta scores: E(): 2.7e-33, FT 44.24% id in 278 aa, and to Escherichia coli protein HemK FT or B1212 SW:HEMK_ECOLI (P37186) (277 aa) fasta scores: E(): FT 1.2e-16, 29.71% id in 276 aa" FT /protein_id="CAE49562.1" FT /translation="MLAQALHKAEAILAEAGVASPRNDVHLMAAHLLNCQPMELFLKGD FT HDVPENFWEWVERRKNREPLQHILQVTWFGPLELHVGPGVFIPRPETEVLADWAVRHTD FT SEDIVVDLCTGSGALAAYIAHEHPECSVWAVELSDAAMAFARRNLPDRVHLVQGDVTDP FT EILDHLSGAVDLLVSNPPYVPLSNDLEPEVYQDPSMAVFSGDSGMDTINAMIPVIYRLL FT APGGLVGIEHDDLTSELTQQALIDHGGFSNIEPLKDLTGRNRFVVASKIL" FT misc_feature 1024812..1025207 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 1025034..1025054 FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT CDS 1025435..1026085 FT /transl_table=11 FT /locus_tag="DIP1043" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 22.6 kDa protein Rv1301 or MT1340 or MTCY373.21 FT SW:YD01_MYCTU (Q10618) (217 aa) fasta scores: E(): 2.3e-50, FT 64.92% id in 211 aa, and to Bacillus subtilis hypothetical FT 37.0 kDa protein in spoIIR-glyC intergenic region YwlC or FT Ipc-29D SW:YWLC_BACSU (P39153) (346 aa) fasta scores: E(): FT 1.2e-18, 33.01% id in 206 aa" FT /protein_id="CAE49563.1" FT /translation="MGRIFDCSDAETREAGLQQAISTVKDGRLVVIPTDTLYGIGCDAF FT DNTAVAKLLETKHRGPDMPVPVLVGSWDTARGLVHSYSDQLRTLIEAFWPGGLSIVVEQ FT APSLQWNLGDTRGTVMLRMPLHPVAIELLRETGPMAVSSANISGQTPATTAQEAQRQLG FT DNVSVYLDAGETPVGTASTIIDLSGDHPRILREGAISAERVAEVLEVDVETLR" FT misc_feature 1025495..1026025 FT /note="HMMPfam hit to PF01300, SUA5/yciO/yrdC family" FT misc_feature 1025519..1025557 FT /note="ScanRegExp hit to PS01147, SUA5/yciO/yrdC family FT signature." FT CDS 1026086..1027255 FT /transl_table=11 FT /locus_tag="DIP1044" FT /product="Glycosyl trasferase" FT /note="Similar to Mycobacterium tuberculosis putative FT undecaprenyl-phosphate FT alpha-N-acetylglucosaminyltransferase Rfe or Rv1302 or FT MT1341 or MTCY373.22 SW:RFE_MYCTU (Q10606) (404 aa) fasta FT scores: E(): 1e-75, 56.91% id in 369 aa, and to Bacillus FT subtilis phospho-N-acetylmuramoyl-pentapeptide-transferase FT MraY SW:MRAY_BACSU (Q03521) (324 aa) fasta scores: E(): FT 3.6e-10, 26.53% id in 343 aa" FT /protein_id="CAE49564.1" FT /translation="MGAGAGVAGVPMRELALIILVAASLTFLTTGIVRYAVVKSGRMGE FT IRERDVHTQPKPRLGGVAMFSGFIGAVFLADQLPALTRGFKPVTPEMSAVFWAGAIIVI FT VGILDDLFELDAITKLAGQVLGAAVMSILGLTWTLVYLPFGGGSTLVLDQVASTLVTVL FT FTVTLINAINFVDGLDGLAAGLGMIAGLSILLFSMTVLHDQGGMVSAYPPAIIAASLVG FT MCAGFLPHNFEPARIFMGDSGSMLIGLLLAAASTSASGKIDMSLYGTVDVIALMSPIIV FT VIAAVFIPMLDLVMAIVRRVRKGKSPFSADKMHLHHRLLSLGHTHRRVVLVLYLWVSVV FT AFGAVAFSIVPPVFATVGVITAIVFAVLASRGPVIRAQKEAHRREHPLS" FT misc_feature order(1026128..1026196,1026257..1026325,1026368..1026436, FT 1026455..1026523,1026551..1026610,1026623..1026691, FT 1026704..1026772,1026791..1026859,1026902..1026970, FT 1027073..1027132,1027142..1027210) FT /note="11 probable transmembrane helices predicted for FT DIP1044 by TMHMM2.0" FT misc_feature 1026359..1026877 FT /note="HMMPfam hit to PF00953, Glycosyl transferase" FT CDS 1027273..1027716 FT /transl_table=11 FT /locus_tag="DIP1045" FT /product="Hypothetical integral membrane protein" FT /note="no database matches" FT /protein_id="CAE49565.1" FT /translation="MITSDQSNASQFDDHRRPLLRALKFGAIALVAITLISLVLWGRFR FT DLPGIWGVVLGAAVGGGFVLLTVVSVLVTSNTSAATTGAVVLGGWLLKLVALLIVLIIL FT RGMDFYDPVAFVVTTIIALVVVLGTEVWGVITSRVTYVSPDNI" FT misc_feature order(1027330..1027398,1027426..1027494,1027513..1027581, FT 1027609..1027677) FT /note="4 probable transmembrane helices predicted for FT DIP1045 by TMHMM2.0" FT CDS 1028202..1028987 FT /transl_table=11 FT /gene="atpB" FT /locus_tag="DIP1046" FT /product="ATP synthase A chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase A FT chain AtpB SW:ATP6_STRLI (P50012) (281 aa) fasta scores: FT E(): 1e-26, 38.61% id in 259 aa" FT /protein_id="CAE49566.1" FT /translation="MKGEFHAPSLDHEFFPDPIWFADVANGWFTIDRLMFVRLLMALVL FT VIFFAVAMRSPKLVPSGLQNVAEYLLDFVRIHIAEDILGKKEGNRFLPILSTIFFVVLF FT CNLPSVIPFLNISPNARIGMPLVLALFGYIAFIYAGAKRYGFFKYVKSSVVIPNLPPVL FT HLLVVPLEFFSTFVLRPATLTLRLMANMLAGHIILVLLFSATNFFFWQLNGWTALSAVT FT LVAGIAFTLFEMLVIFLQAYIFALLSAVYIELALHADEH" FT misc_feature order(1028301..1028360,1028478..1028546,1028565..1028624, FT 1028667..1028735,1028772..1028831,1028874..1028942) FT /note="6 probable transmembrane helices predicted for FT DIP1046 by TMHMM2.0" FT misc_feature 1028463..1028963 FT /note="HMMPfam hit to PF00119, ATP synthase A chain" FT misc_feature 1028481..1028531 FT /note="FPrintScan hit to PR00123, ATP synthase A subunit FT signature" FT misc_feature 1028736..1028804 FT /note="FPrintScan hit to PR00123, ATP synthase A subunit FT signature" FT misc_feature 1028745..1028774 FT /note="ScanRegExp hit to PS00449, ATP synthase a subunit FT signature." FT misc_feature 1028916..1028963 FT /note="FPrintScan hit to PR00123, ATP synthase A subunit FT signature" FT CDS 1029073..1029312 FT /transl_table=11 FT /gene="atpE" FT /locus_tag="DIP1047" FT /product="ATP synthase C chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces coelicolor ATP synthase C FT chain AtpE or 2SC6G5.12 SW:ATPL_STRCO (P50014) (76 aa) FT fasta scores: E(): 2.4e-11, 53.42% id in 73 aa" FT /protein_id="CAE49567.1" FT /translation="MNEVILAASDTAVSGSIATVGYGIATIGPGLGIGILVGKALEGMA FT RQPEMAGQLRTTMFLGIAFVEALALIGLVAGFIL" FT misc_feature order(1029115..1029183,1029244..1029306) FT /note="2 probable transmembrane helices predicted for FT DIP1047 by TMHMM2.0" FT misc_feature 1029121..1029180 FT /note="FPrintScan hit to PR00124, ATP synthase C subunit FT signature" FT misc_feature 1029121..1029309 FT /note="HMMPfam hit to PF00137, ATP synthase subunit C" FT misc_feature 1029184..1029231 FT /note="FPrintScan hit to PR00124, ATP synthase C subunit FT signature" FT misc_feature 1029205..1029270 FT /note="ScanRegExp hit to PS00605, ATP synthase c subunit FT signature." FT misc_feature 1029235..1029309 FT /note="FPrintScan hit to PR00124, ATP synthase C subunit FT signature" FT CDS 1029340..1029906 FT /transl_table=11 FT /gene="atpF" FT /locus_tag="DIP1048" FT /product="ATP synthase B chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase B FT chain AtpF SW:ATPF_STRLI (P50013) (181 aa) fasta scores: FT E(): 6.3e-15, 41.21% id in 165 aa, and to N-terminus of FT Mycobacterium tuberculosis ATP synthase delta chain AtpH or FT Rv1307 or MT1347 or MTCY373.27 SW:ATPD_MYCTU (Q10594) (446 FT aa) fasta scores: E(): 7.9e-10, 30.12% id in 156 aa" FT /protein_id="CAE49568.1" FT /translation="MTNVIKYLAEGEALPLEDHPSVLLPASYDIVWSLVVFIIVLILFW FT KFVRPKYQEVLTEREDRIKGGIQRAEAAQAEAKAALEKYNAQLAEARAEAAEIREEARA FT KGKQIEAEMKAKATEESNRIIESGEKQLAAQREQVVTELRREMGQNSISLAERLLGDQL FT SDDVKRSGTIDKFLAELDTVSPAGK" FT misc_feature 1029406..1029474 FT /note="1 probable transmembrane helix predicted for DIP1048 FT by TMHMM2.0" FT misc_feature 1029427..1029888 FT /note="HMMPfam hit to PF00430, ATP synthase B/B' CF(0)" FT CDS 1029912..1030733 FT /transl_table=11 FT /gene="atpH" FT /locus_tag="DIP1049" FT /product="ATP synthase delta chain" FT /EC_number="3.6.3.14" FT /note="Similar to Streptomyces lividans ATP synthase delta FT chain AtpH SW:ATPD_STRLI (P50008) (272 aa) fasta scores: FT E(): 1.7e-22, 37.82% id in 267 aa, and to C-terminus of FT Mycobacterium tuberculosis ATP synthase delta chain AtpH or FT Rv1307 or MT1347 or MTCY373.27 SW:ATPD_MYCTU (Q10594) (446 FT aa) fasta scores: E(): 1.4e-21, 35.86% id in 276 aa" FT /protein_id="CAE49569.1" FT /translation="MHAASREALARVTSDLDKALWEAKENAIATAAHTGAELFDVVEVL FT DGDRALRVAVADSAKSAEDRAGLVSAVFAGKVSPATLEVLVTSARELWSNPREFRDGLV FT TLGRRALLRSAEGQGQLGQVEDELFRLSRILDKEPELTLLLDDRSTDGAKKRELLAKVL FT YGKVTAVTEALALQVIGRRESNAIDDIDALSKEAAALQGHSVAHVVSAGRLNDEQNQAL FT AQKLERIYGRAMSIHSEVDPSLLGGLVIRVGDEVIDGSTSGKLERLRANLA" FT misc_feature 1030227..1030727 FT /note="HMMPfam hit to PF00213, ATP synthase delta (OSCP) FT subunit" FT misc_feature 1030605..1030652 FT /note="FPrintScan hit to PR00125, ATP synthase delta FT subunit signature" FT misc_feature 1030611..1030670 FT /note="ScanRegExp hit to PS00389, ATP synthase delta (OSCP) FT subunit signature." FT misc_feature 1030650..1030706 FT /note="FPrintScan hit to PR00125, ATP synthase delta FT subunit signature" FT CDS 1030794..1032422 FT /transl_table=11 FT /gene="atpA" FT /locus_tag="DIP1050" FT /product="ATP synthase alpha chain" FT /EC_number="3.6.3.14" FT /note="Similar to Mycobacterium tuberculosis ATP synthase FT alpha chain AtpA or Rv1308 or MT1348 or MTCY373.28 FT SW:ATPA_MYCTU (Q10592) (549 aa) fasta scores: E(): FT 6.3e-148, 70.29% id in 542 aa, and to Streptomyces lividans FT ATP synthase alpha chain AtpA SW:ATPA_STRLI (P50001) (528 FT aa) fasta scores: E(): 1.7e-131, 67.24% id in 516 aa" FT /protein_id="CAE49570.1" FT /translation="MAELTISSDEIRSAIANYTSSYSAEASREEVGVVISAADGIAQVS FT GLPSVMANELLEFPSGVIGVAQNLDTDRIGVVVLGNYEILKEGDEVKRTGEVLSIPVGE FT KFLGRVINPLGQPIDGLGAIEAEEQRVLELQAPSVLQRQPVEEPMQTGIKAIDAMTPIG FT RGQRQLIIGDRKTGKTAVCIDTILNQKANWESGDKSKQVRCIYVAVGQKGSTIAAVRQT FT LEEHGALEYTTIVAAPASDSAGFKWLAPFAGAALGQHWMYQGNHVLVIYDDLTKQAEAY FT RAISLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDDMGAGSMTALPIIETKANDVSAF FT IPTNVISITDGQVFLESDLFNQGVRPAINVGVSVSRVGGAAQTKGMKKVSGSLRLDLAA FT YRDLEAFATFASDLDAASKAQLDRGARLVELLKQAENAPQSVEHQIVSIWLAGNGHFDT FT VPVEDIRRFEFDLIDHLHAAVPQVFEQIAGGAQLSEESQAALVAATEDFKRTFQTTDGT FT PVINEPEVAALSADQVKKNTISVKK" FT misc_feature 1030872..1031078 FT /note="HMMPfam hit to PF02874, ATP synthase alpha/beta FT family, beta-barrel domain" FT misc_feature 1031085..1031936 FT /note="HMMPfam hit to PF00006, ATP synthase alpha/beta FT family, nucleotide-binding domain" FT misc_feature 1031307..1031330 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1031889..1031918 FT /note="ScanRegExp hit to PS00152, ATP synthase alpha and FT beta subunits signature." FT misc_feature 1031931..1032326 FT /note="BlastProDom hit to PD001099, PD001099" FT misc_feature 1031940..1032257 FT /note="HMMPfam hit to PF00306, ATP synthase alpha/beta FT chain, C terminal domain" FT CDS 1032476..1033453 FT /transl_table=11 FT /gene="atpG" FT /locus_tag="DIP1051" FT /product="ATP synthase gamma chain" FT /EC_number="3.6.3.14" FT /note="Similar to Mycobacterium tuberculosis ATP synthase FT gamma chain AtpG or Rv1309 or MT1349 or MTCY373.29 FT SW:ATPG_MYCTU (Q10597) (305 aa) fasta scores: E(): 8.1e-34, FT 50.93% id in 320 aa, and to Streptomyces lividans ATP FT synthase gamma chain AtpG SW:ATPG_STRLI (P50007) (302 aa) FT fasta scores: E(): 8.4e-19, 45.62% id in 320 aa" FT /protein_id="CAE49571.1" FT /translation="MANLRELRDRIRSVNSTKKITKAQELIATSRITKAQARVEASQPY FT ATEIHKVMERLAAASSLEHPMLREREGGKRAAVLVVSSDRGMAGGYNYNVFKKAAELEK FT LLEENGYEVVRYVTGNKGVGYYKFRGQEVAGAWTGFSQDPSWEETHDVRRHLIDGFNAS FT SNGTARYRDGLNTDEGQEIQGFDQVHVVYTEFESMLTQTARAHQLLPIEPVIETVEIPE FT ADGILDQSGEPTPDVEFEPDADTLLEALLPQYVSRSLFAMFLEAAAAESASRRNAMKSA FT TDNATALVKDLSRVANQARQAQITQEITEIVGGASALGDSGESD" FT misc_feature 1032479..1033429 FT /note="HMMPfam hit to PF00231, ATP synthase" FT misc_feature 1032692..1032751 FT /note="FPrintScan hit to PR00126, ATP synthase gamma FT subunit signature" FT misc_feature 1033031..1033084 FT /note="FPrintScan hit to PR00126, ATP synthase gamma FT subunit signature" FT misc_feature 1033268..1033327 FT /note="FPrintScan hit to PR00126, ATP synthase gamma FT subunit signature" FT misc_feature 1033361..1033426 FT /note="FPrintScan hit to PR00126, ATP synthase gamma FT subunit signature" FT misc_feature 1033385..1033426 FT /note="ScanRegExp hit to PS00153, ATP synthase gamma FT subunit signature." FT CDS 1033457..1034902 FT /transl_table=11 FT /gene="atpD" FT /locus_tag="DIP1052" FT /product="ATP synthase beta chain" FT /EC_number="3.6.3.14" FT /note="Similar to Mycobacterium tuberculosis ATP synthase FT beta chain AtpD or Rv1310 or MT1350 or MTCY373.30 FT SW:ATPB_MYCTU (Q10593) (486 aa) fasta scores: E(): FT 1.7e-132, 73.19% id in 485 aa, and to Streptomyces lividans FT ATP synthase beta chain AtpD SW:ATPB_STRLI (P50004) (477 FT aa) fasta scores: E(): 4e-120, 70.4% id in 473 aa" FT /protein_id="CAE49572.1" FT /translation="MTTALEEQNTQQASVAGRVVRVIGPVVDVEFPRGELPALYNALTV FT EVTLEAVAKTITLEVAQHLGDNLVRAVSMAPTDGLVRGAVVTDSGKPISVPVGDVVKGH FT VFNALGDCLDEPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGGKI FT GLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTAL FT VFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP FT SAVGYQPTLADEMGVLQERITSIKGKSITSLQAVYVPADDYTDPAPATTFAHLDATTEL FT DRAIASKGIYPAVNPLTSTSRILEPGIVGERHYAVAQRVINILQKNKELQDIIAILGMD FT ELSEEDKITVQRARRLERFLGQNFFVAEKFTGIPGSYVPLAHTIDAFERICNGDFDHYP FT EQAFNGLGGLDDVEAAYKKMTEK" FT misc_feature 1033511..1033726 FT /note="HMMPfam hit to PF02874, ATP synthase alpha/beta FT family, beta-barrel domain" FT misc_feature 1033733..1034554 FT /note="HMMPfam hit to PF00006, ATP synthase alpha/beta FT family, nucleotide-binding domain" FT misc_feature 1033931..1034491 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 1033955..1033978 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1034507..1034536 FT /note="ScanRegExp hit to PS00152, ATP synthase alpha and FT beta subunits signature." FT misc_feature 1034561..1034896 FT /note="HMMPfam hit to PF00306, ATP synthase alpha/beta FT chain, C terminal domain" FT CDS 1034916..1035287 FT /transl_table=11 FT /gene="atpC" FT /locus_tag="DIP1053" FT /product="ATP synthase epsilon chain" FT /EC_number="3.6.3.14" FT /note="Similar to Mycobacterium tuberculosis ATP synthase FT epsilon chain AtpC or Rv1311 or MT1351 or MTCY373.31 FT SW:ATPE_MYCTU (Q10595) (121 aa) fasta scores: E(): 4.7e-14, FT 45.76% id in 118 aa, and to Streptomyces lividans ATP FT synthase epsilon chain AtpC SW:ATPE_STRLI (P50011) (123 aa) FT fasta scores: E(): 6.4e-14, 46.77% id in 124 aa" FT /protein_id="CAE49573.1" FT /translation="MADITVELVSVERMLWSGKASIVTAQTVEGEIGVLPGHEPLLAQL FT VDNGVVTIRPVDGDKLVAAVQGGFLSISKEKVTILAEYAIWADEVNTAESESHLQADDE FT ISKARAEAELKAVRRKAEA" FT misc_feature 1034922..1035173 FT /note="HMMPfam hit to PF02823, ATP synthase, Delta/Epsilon FT chain, beta-sandwich domain" FT misc_feature 1034931..1035161 FT /note="BlastProDom hit to PD000944, PD000944" FT CDS 1035514..1035981 FT /transl_table=11 FT /locus_tag="DIP1054" FT /product="Conserved hypothetical exported protein" FT /note="Similar to Mycobacterium leprae hypothetical 16.5 FT kDa protein ML1147 or u471B SW:YD12_MYCLE (P53432) (147 aa) FT fasta scores: E(): 4.8e-12, 31.65% id in 139 aa, and to FT Mycobacterium tuberculosis hypothetical 16.6 kDa protein FT Rv1312 MT1352 or MTCY373.32 SW:YD12_MYCTU (Q10620) (147 aa) FT fasta scores: E(): 1.6e-11, 32.37% id in 139 aa, and to FT Streptomyces coelicolor putative secreted/membrane protein FT 2sc6g5.19 TR:Q9K4D3 (EMBL:AL359152) (151 aa) fasta scores: FT E(): 1.1e-05, 27.97% id in 143 aa" FT /protein_id="CAE49574.1" FT /translation="MKFAIGITLLLLVLAVLLAVAAWRFLYVRCSGSAVVIRELPSPSG FT RHWRHGSMRYHGEGLQYFKLRSLKPGPDLVVDRQQVDYLGARPLEDSEILLLHSDATVH FT KIKYLAREYEVALDKSASMAFVSWIESAPSRRQERIDYNALYRKVDRNKRK" FT misc_feature 1035514..1035585 FT /note="Signal peptide predicted for DIP1054 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.462 between residues 24 and 25" FT CDS 1036006..1036695 FT /transl_table=11 FT /locus_tag="DIP1055" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 25.1 kDa protein Rv1321 MT1363 or MTCY130.06 SW:YD21_MYCTU FT (Q10634) (226 aa) fasta scores: E(): 1.8e-66, 73.79% id in FT 229 aa, and to Mycobacterium leprae hypothetical 24.4 kDa FT protein MLl1155 or B1549_c3_223 SW:YD21_MYCLE (P53524) (220 FT aa) fasta scores: E(): 9.1e-64, 72.56% id in 226 aa" FT /protein_id="CAE49575.1" FT /translation="MRLVIARCSVDYIGRLEAHLPMADRLLMVKADGSVSIHADDRAYK FT PLNWMTPPCTLTETTHEESETGESIPLWIVENKKGEQLRITIEALHSDMYYDLGEDPGL FT QKDGVEAHLQELLAEHIETLGDGYSLVRREYPTPIGPVDILCRDDKGGSVAVEIKRRGG FT IDGVEQLSRYLELLNRDDLLAPVAGVFAAQHIKPQARTLAEDRGIRCVTLDYDSLRGIE FT STELRLF" FT misc_feature 1036006..1036692 FT /note="HMMPfam hit to PF01939, Protein of unknown function FT DUF91" FT misc_feature 1036015..1036611 FT /note="BlastProDom hit to PD013521, PD013521" FT CDS 1036724..1037008 FT /transl_table=11 FT /locus_tag="DIP1056" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative FT ATP/GTP-binding protein, doubtful CDS 2SC6G5.35 TR:Q9K4C0 FT (EMBL:AL359152) (110 aa) fasta scores: E(): 1.1e-12, 46.87% FT id in 96 aa, and to Mycobacterium tuberculosis hypothetical FT 11.3 kDa protein Rv1322 MT1363.1 or MTCY130.07 FT SW:YD22_MYCTU (Q10635) (98 aa) fasta scores: E(): 1.4e-10, FT 42.22% id in 90 aa" FT /protein_id="CAE49576.1" FT /translation="MGRRNRRAVPELRALPRDGATYYGTQVVEGPQWTNGELYLMRHTG FT SHAAVKFYVCPGCNQNIPPGIAHIVAWPKDSVRGADDRRHWHRSCWERR" FT stem_loop 1037025..1037072 FT /note="Score 54: 18/18 (100%) matches, 0 gaps" FT CDS complement(1037086..1037544) FT /transl_table=11 FT /locus_tag="DIP1057" FT /product="Putative methylmalonyl-CoA epimerase" FT /note="Similar to Mycobacterium leprae B1549_F2_87 ML1157 FT TR:Q49717 (EMBL:U00014) (155 aa) fasta scores: E(): FT 1.2e-28, 55.47% id in 137 aa, and to Mycobacterium FT tuberculosis CDC1551 4-hydroxyphenylpyruvate dioxygenase C FT terminal domain containing protein MT1364 TR:AAK45627 FT (EMBL:AE007009) (152 aa) fasta scores: E(): 3e-27, 53.28% FT id in 137 aa, and to Pyrococcus horikoshii FT methylmalonyl-CoA epimerase PHO272 TR:AAK52053 FT (EMBL:AF364548) (136 aa) fasta scores: E(): 9.8e-13, 38.63% FT id in 132 aa, and to Homo sapiens methylmalonyl-CoA FT epimerase TR:AAK52052 (EMBL:AF364547) (176 aa) fasta FT scores: E(): 2.7e-11, 36.84% id in 133 aa" FT /protein_id="CAE49577.1" FT /translation="MSTDISAIDIPHELVICLDHVGIAVPDFDAAVEFYRSAFGWVNHH FT DEVNEEQGVHEAMIGPKNLKETDGMIQILAPLNEESTIAKFIDKKGPGLQQMCLRTSDI FT DALSEHLKAQGVRLLYPEPKNGTAGARINFVHPKDAGGVLLELTEPQK" FT misc_feature complement(1037095..1037475) FT /note="HMMPfam hit to PF00903, Glyoxalase/Bleomycin FT resistance protein/Dioxygenase superfamily" FT CDS 1037621..1037947 FT /transl_table=11 FT /locus_tag="DIP1058" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 11.0 kDa protein Rv1898 or MT1949 or MTCY180.20c FT SW:YI98_MYCTU (O07734) (102 aa) fasta scores: E(): 5.8e-16, FT 56.43% id in 101 aa, and to Aquifex aeolicus hypothetical FT 17.9 kDa protein AQ_2067 TR:O67847 (EMBL:AE000771) (157 aa) FT fasta scores: E(): 4.7e-08, 40.19% id in 102 aa" FT /protein_id="CAE49578.1" FT /translation="MLIDMILAFSVAPTETPNNKAEMADVVAEAIRVVRESGLPNETNA FT MFTLIEGEWDEVMAVVKKATDAVLAVSPRASLVIKADIRPGYTGQLQQKVASVERVLAG FT DSES" FT misc_feature 1037633..1037917 FT /note="HMMPfam hit to PF01910, Protein of unknown function FT DUF77" FT CDS complement(1037950..1038771) FT /transl_table=11 FT /locus_tag="DIP1059" FT /product="Putative iron-siderophore uptake system FT ATP-binding component" FT /note="Similar to Streptomyces coelicolor putative FT iron-siderophore uptake system ATP-binding component FT SCI51.25C TR:Q9S215 (EMBL:AL109848) (301 aa) fasta scores: FT E(): 1.9e-42, 50.58% id in 255 aa, and to Escherichia coli FT ferric enterobactin transport ATP-binding protein fepC FT b0588 SW:FEPC_ECOLI (P23878) (271 aa) fasta scores: E(): FT 1.1e-41, 49.61% id in 262 aa" FT /protein_id="CAE49580.1" FT /translation="MTSTSPILRTDSVTLAWDKHTVSTDLTVEVPQGQFTAIIGPNGCG FT KSTLLKSFARILQPHTGQVYLGDNPLDSLHTKYIAQRIALLPQTALAPADITVEELVGR FT GRFPYQTLLRQWSTKDAQAVDSALLATGTAQLRHRRVTELSGGQRQRVWLAMVLAQNTP FT VVLLDEPTTYLDVAHQYQLLELARALRQQLGRTIVTVLHDLQQAVRYADHLIVMKGGAV FT YAEGAPSSIMTPQLISEVFDINVDVHTIDDHVVIVPKTMPQPDVSVLENLQ" FT misc_feature complement(1037950..1042307) FT /note="Putative iron uptake system. Low GC content FT (58.02%)" FT misc_feature complement(1038109..1038678) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(1038112..1038675) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(1038124..1038342) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(1038298..1038342) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(1038592..1038669) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(1038631..1038654) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1038768..1039727) FT /transl_table=11 FT /locus_tag="DIP1060" FT /product="Putative iron-siderophore uptake system FT transmembrane component" FT /note="Similar to Streptomyces coelicolor putative FT iron-siderophore uptake system transmembrane component FT sci51.26C TR:Q9S214 (EMBL:AL109848) (375 aa) fasta scores: FT E(): 5e-40, 40.74% id in 324 aa, and to Escherichia coli FT ferric enterobactin transport system permease protein fepg FT fepg or B0589 SW:FEPG_ECOLI (P23877) (330 aa) fasta scores: FT E(): 1.8e-45, 44.09% id in 322 aa" FT /protein_id="CAE49582.1" FT /translation="MRALVILSSLLLVTAAYSLVIPGAGLSTWQLLTSETPLAHTVVMQ FT WRLPRVVTGILVGAALAIAGSLFQSLTRNPLGSPDIIGFSTGAYTGVIAAFLLGWSGFG FT ATIVGALIGGLAVSVVVIALSVRTRIDGLRIILVGLGISAMLSALNRWLITRGELDTAL FT SAASWGAGSLNGLRWTIAIPACCVLAILITTTIPLRRFLDVLSLGDDLAVGLGLRLQLT FT KLLLLVGGVFLVAATTAVAGPIAFVALASPHIARALTSSARTPLVETSVIGALLIIVAD FT LIGQRLFYPTQLPVGLVTVTIGGMYLLWLIARGSKENS" FT misc_feature complement(1038789..1039661) FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature complement(order(1038792..1038848,1038864..1038929, FT 1038990..1039055,1039152..1039202,1039263..1039328, FT 1039350..1039415,1039428..1039484,1039524..1039589, FT 1039650..1039706)) FT /note="9 probable transmembrane helices predicted for FT DIP1060 by TMHMM2.0" FT misc_feature complement(1038795..1039109) FT /note="BlastProDom hit to PD001557, PD001557" FT misc_feature complement(1039653..1039727) FT /note="Signal peptide predicted for DIP1060 by SignalP 2.0 FT HMM (Signal peptide probability 0.966) with cleavage site FT probability 0.180 between residues 25 and 26" FT CDS complement(1039729..1040736) FT /transl_table=11 FT /locus_tag="DIP1061" FT /product="Putative iron-siderophore uptake system FT transmembrane component" FT /note="Similar to Streptomyces coelicolor putative FT iron-siderophore uptake system transmembrane component FT sci51.27C TR:Q9S213 (EMBL:AL109848) (348 aa) fasta scores: FT E(): 8e-36, 36.53% id in 323 aa, and to Escherichia coli FT ferric enterobactin transport system permease protein fepD FT or B0590 SW:FEPD_ECOLI (P23876) (334 aa) fasta scores: E(): FT 5.2e-40, 40.37% id in 322 aa" FT /protein_id="CAE49584.1" FT /translation="MLRQPRVRLPLPLVITFLVIILLCTIIMSLGVGARNITSPDILAA FT LRHYGDPTNSHIIWGRRIPRTLIAIAAGASLSLAGVLIQALTRNPLADTGVFGINAGAA FT FTIVIGIALAGSLSHISIFALALLGAILAGACVYALSMNSCKGSDPLRLVLAGVALSAI FT LTGIGDGLSLVNPQAFDRLKSWMVGNIDAGSYQPAAVAGVGLILGILVTATCMRQLNAL FT SLGDELAITMGASIAKTRLFTFIAIVVLAASATAAAGVITFLGLMVPHIARWIVGPNLL FT RLVATASLIGPIIVLSADILGRIIVPGEFPAGVVVAFIGAPFLIAYAQTKRKEI" FT misc_feature complement(1039744..1040070) FT /note="BlastProDom hit to PD001557, PD001557" FT misc_feature complement(1039750..1040640) FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature complement(order(1039756..1039821,1039834..1039899, FT 1039939..1040004,1040089..1040154,1040215..1040280, FT 1040311..1040376,1040383..1040448,1040479..1040535, FT 1040641..1040706)) FT /note="9 probable transmembrane helices predicted for FT DIP1061 by TMHMM2.0" FT misc_feature complement(1040635..1040736) FT /note="Signal peptide predicted for DIP1061 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.663 between residues 34 and 35" FT CDS 1040784..1041827 FT /transl_table=11 FT /locus_tag="DIP1062" FT /product="Putative iron-siderophore uptake system exported FT solute-binding component" FT /note="Similar to Escherichia coli iron(III) FT dicitrate-binding periplasmic protein precursor FecB or FT B4290 SW:FECB_ECOLI (P15028) (300 aa) fasta scores: E(): FT 1.1e-12, 25.55% id in 270 aa, and to Campylobacter jejuni FT enterochelin uptake periplasmic binding protein CeuE or FT CJ1355 TR:Q9PMU4 (EMBL:AL139078) (330 aa) fasta scores: FT E(): 3e-12, 28.35% id in 328 aa, and to Vibrio anguillarum FT ferric anguibactin-binding protein precursor FatB FT SW:FATB_VIBAN (P11460) (322 aa) fasta scores: E(): 1.5e-09, FT 28.72% id in 289 aa" FT /protein_id="CAE49585.1" FT /translation="MFEISRSRAKAMRPFLALATATVMMLSLAACSSSDNSSTNAQGNT FT DVAVGGQRFSTADQETAKLGSDAQPGQFPRTVVHAAGTTEITTKPERVVVLDTGELDSV FT LSLGITPVGMTTTKGANPVPSYLADKVKDVERVGTINELNIEAIAALKPDLIIGSQLRA FT DKLYPQLSDIAPTVFSIRPGSPWKENFLLVGEALGMEKEAEEKLNEYADRVAELKNNVP FT QNTEVSLVRFMPNKLRLYGNKSLIGVVLADAGLARPEKQNVDDLAVEISPENIDQAAGS FT VIFYTSYGKPDATGETAVVEGPAWKNLEAVAAGKAHRVNDDVWFLGLGPTGAMEIVSDL FT HDYLLKK" FT misc_feature 1040784..1040912 FT /note="Signal peptide predicted for DIP1062 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.358 between residues 43 and 44" FT misc_feature 1041051..1041752 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT CDS complement(1041924..1042307) FT /transl_table=11 FT /locus_tag="DIP1063" FT /product="Putative integral membrane protein" FT /note="Weakly similar to Streptomyces coelicolor putative FT membrane protein SCL2.30c TR:Q9L269 (EMBL:AL137778) (150 FT aa) fasta scores: E(): 0.12, 28.3% id in 106 aa" FT /protein_id="CAE49586.1" FT /translation="MEEKVHNLMNKMQDRHLHMKAAWYGPVLSPLLLVAGMCLLIFGII FT ILPTPAPGWLCIFIALGILSLVHPPTRRLTIWLASKLDIFFAWYGQRHPAVRTSLVGLL FT ILFMVLVMGGTYLFIAPAHWPSI" FT misc_feature complement(order(1041942..1042007,1042104..1042154, FT 1042170..1042244)) FT /note="3 probable transmembrane helices predicted for FT DIP1063 by TMHMM2.0" FT CDS 1042460..1043356 FT /transl_table=11 FT /locus_tag="DIP1064" FT /product="Putative thioredoxin-like protein" FT /note="Similar to Mycobacterium leprae TrxA SWALL:Q49716 FT (EMBL:U00014) (255 aa) fasta scores: E(): 7.3e-18, 37.22% FT id in 223 aa, and to Streptomyces coelicolor putative FT thioredoxin SC8F4.23 TR:Q9L2A3 (EMBL:AL137242) (318 aa) FT fasta scores: E(): 6.6e-10, 34.06% id in 320 aa, and to FT Corynebacterium nephridii thioredoxin C-1 SW:THI1_CORNE FT (P00275) (105 aa) fasta scores: E(): 0.11, 25.96% id in 104 FT aa" FT /protein_id="CAE49587.1" FT /translation="MTTPNRFVAGAIDLGEVKARAEARSQAQRAGQSSVTEVEPTVTIT FT MDNVEEQLIKRSMQVPVVVLIGTPRSPDSEQLRADLSQIASGASLSFIFAYIDADATPQ FT VAQMFGIQGLPTVVALAQGQPLANFEGGQPMEALQQWTAAVVKAVEGKLPGITGDDAEA FT EPAEDPRFEPATEALNAGDFDAAIAVYEEILRHEPKNQMALQARDNARLLSRLKDADRS FT VDPIAVADADLQDVDKAFAAADAEITTGKVEEAFDRLIELLPNEKVRTRLLELYSVFEP FT SDSRVQAARSKMASKLF" FT misc_feature 1042577..1042891 FT /note="ProfileScan hit to PS50223, Thioredoxin-domain (does FT not find all)." FT misc_feature 1042958..1043059 FT /note="ProfileScan hit to PS50005, TPR repeat." FT repeat_region 1043360..1043612 FT /note="repX" FT CDS complement(1043761..1045959) FT /transl_table=11 FT /gene="glgB" FT /locus_tag="DIP1065" FT /product="1,4-alpha-glucan branching enzyme" FT /EC_number="2.4.1.18" FT /note="Similar to Escherichia coli 1,4-alpha-glucan FT branching enzyme GlgB or B3432 SW:GLGB_ECOLI (P07762) (728 FT aa) fasta scores: E(): 5.3e-126, 44.81% id in 723 aa, and FT to Mycobacterium tuberculosis probable 1,4-alpha-glucan FT branching enzyme GlgB or Rv1326c or MT1368 or MTCY130.11c FT SW:GLGB_MYCTU (Q10625) (731 aa) fasta scores: E(): 5e-179, FT 59.52% id in 719 aa" FT /protein_id="CAE49588.1" FT /translation="MVSPTQITPVHPDVLHALKICQYHDPHGVYGWHEVDAERAVIRTR FT HIGAERVETLLSDSTVVELAAVGDDIFEAIVDHDASCDYRLRIHWQGGQVTEQADAYHF FT LPTLGDLDLHLINEGRHERLWEVLGANPTTITTAMGDVEGTAFAVWAPNASGVAVIGDF FT CGWNPSQYPMRSLGSTGIWELFIPNIGVGTVYKFAIHTHEGHRLDKADPMAKRAEVAPA FT TGSIIASSSYTWNDDTWMTNRAHTDHDNTAMSVYEVHLGSWSQGQNYEELATNLVDYVK FT EMGYTHVEFLPVAEHPFGGSWGYQVSGYYAPTSRWGTPDQLRLLIDAFHQAGIGVIVDW FT VPAHFPKDAFALGRFDGQALYEHPDWRRGEQKDWGTYVFDFGRNEVRNFLVANALYWLE FT EFHVDGLRVDAVASMLYLDYSREPGEWLPNIYGGRENLEAVQFLQEMNATVHKSHPGVM FT TIAEESTSWPGVTSPTWEGGLGFSMKWNMGWMNDTLEYFSHEPIHRMYHHNDITFSMVY FT AYSEKFVLPFSHDEVVHGKGSLWTRMPGDAWNKAAGLRTLYAYMYAHPGKNLLFQGQEF FT GQVKEWSEERSLDWGDMDGWEGEYHRGIRTLVQDLNALYKDSPALYSQDNNPAGFSWTK FT SDDAANNILSFVRYGADGSKILAVFNFGGADHPSYKLGVPEGGNWKCILNTDAGIYEGE FT DNYLDSDVMAWDTDWDGYQHSLTVHIPAMSGQLYRWEA" FT misc_feature complement(1044169..1045194) FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT misc_feature complement(1045297..1045587) FT /note="HMMPfam hit to PF02922, Isoamylase N-terminal FT domain" FT CDS complement(1046014..1048050) FT /transl_table=11 FT /locus_tag="DIP1066" FT /product="Putative alpha-amylase (glucanase)" FT /EC_number="3.2.1.1" FT /note="Similar to Mycobacterium smegmatis putative FT glucanase GlgE TR:Q9RP48 (EMBL:AF172946) (697 aa) fasta FT scores: E(): 2.1e-155, 58.52% id in 692 aa, and to FT Streptomyces coelicolor putative alpha-amylase Pep1A FT TR:Q9L1K2 (EMBL:AL138978) (675 aa) fasta scores: E(): FT 5.1e-126, 50% id in 662 aa, and to Dictyoglomus FT thermophilum alpha-amylase 3 AmyC SW:AMY3_DICTH (P14899) FT (498 aa) fasta scores: E(): 0.17, 23.84% id in 453 aa" FT /protein_id="CAE49589.1" FT /translation="MSSKSTRLAIEDVRPQVSCGRRPSKAVVGEMIPVSALVWREGHDA FT IAATLVVTDPTGQSSSIAMATKKFEPDRMWASFVPDRPGTWTFRVDAWSDAVATWRHAV FT TTKIEAGQSPEELYNDIEHGVALFESAIASAPKAERKTLAPAFTRVINALRSDAPLRTR FT VAPALSAEITYLLAEHPVRELLTRGHTYSISVERTKALYSSWYELFPRSTGGWDDNGQP FT VHGTFVTTAQALDRVAAMGFDTVYFPPIHPIGEINRKGKNNTLIALPGDVGSPWAIGSA FT EGGHDSVHPRLGTIDDFRALIARARELNLEVALDLALQAAPDHPWAKSHPEFFTVLADG FT SIAFAENPPKKYQDIYPLNFDNAHKKIYAEILRVVLFWVQQGVTTFRVDNPHTKPANFW FT EWLIAKVHAKHPEVIFLAEAFTRPARLYGLGKVGFSQSYTYFTWKTSKTQLQQFAEEIA FT EMADVSRPNLFVNTPDILHESLQYGGRAMFAIRATLAATMSPVWGVYSGFELFEHEAVA FT HGSEEYANSEKYELRPRNFDTARAAGNSLEPYLTLLNSIRAQHPALQQLRVIDFHPTDN FT DSILAYSKVDPVTGDTIVVVVNLDPDHAQQATLELDMEALGRDTTESFDVTDLVSGQQF FT HWGQRNFIRLDPCANVAHIVAIPPAPNSRKAQLSWRGESDYRN" FT misc_feature complement(1046380..1047429) FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain" FT CDS 1048145..1049014 FT /transl_table=11 FT /locus_tag="DIP1067" FT /product="Putative ABC transport system, ATP-binding FT protein" FT /note="Similar to Mycobacterium tuberculosis ABC FT transporter ATP-binding protein Rv3041c or MTV012.56c FT TR:O53288 (EMBL:AL021287) (287 aa) fasta scores: E(): FT 3.2e-63, 62.95% id in 278 aa, and to Streptomyces FT coelicolor putative ABC transporter ATP-binding subunit FT SCI5.06c TR:Q9X9Z4 (EMBL:AL079332) (265 aa) fasta scores: FT E(): 1e-41, 49.41% id in 257 aa" FT /protein_id="CAE49590.1" FT /translation="MHSEKSVMMEPMTNPKNDPRNPDLLLDFEEVEFTRGGKTLVGPIT FT WQVELDERWVILGPNGAGKTTLIRMAAAEEFPSKGALWIMGERIGKTDMRDLRAMIGVS FT SSALGNRIPTNEKVLDLVISAGYAILGRWREEYDKWDHDRAIEILEQVGAYHLADQTWG FT TLSEGERKRVLVARALMTNPELLLLDEPTAGMDLGGREDLVGYLAQLAMDPDAPAMVMI FT THHVEEIPAGFTHALLLDEGEVVSQGLIDEVLTSANLTKAFHQPIKVDKIDGRYFARRQ FT RTARSHRR" FT misc_feature 1048292..1048891 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 1048295..1048870 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 1048301..1048354 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 1048316..1048339 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1048637..1048831 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 1049093..1049902 FT /transl_table=11 FT /locus_tag="DIP1068" FT /product="Putative NUDIX/MutT-family hydrolase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 31.5 kDa protein Rv3040c or MTV012.55c TR:O53287 FT (EMBL:AL021287) (288 aa) fasta scores: E(): 4.1e-25, 37.2% FT id in 258 aa, and to uncultured proteobacterium EBAC31A08 FT predicted MutT superfamily hydrolase TR:Q9F7R7 FT (EMBL:AF279106) (264 aa) fasta scores: E(): 8.4e-18, 31.79% FT id in 239 aa" FT /protein_id="CAE49591.1" FT /translation="MSTPVDLTEGLDGAKLAVTVLMIRDSPTGLEVYVQERVSSMPTFP FT NATVFPGGGVDPRDFELDGVESEHETFGGPSLMHWARSLGTNRNRARALLFAAARELFE FT ETGTLLATHSDGTPIPDATQYHPQRLALESHRLSLSQVLARHDLTLRSEWLRPSTRWVS FT PETDEKRFDMFAFVAVQPPGQEPDGNTREAASTGWFSPSLILDGWRAGLIRLVIPTWAQ FT LLILSRFDCVRDVLEFLRRADMTPIIGDPVDDPRFEEFYSFTPPERF" FT misc_feature 1049132..1049761 FT /note="HMMPfam hit to PF00293, MutT-like domain" FT CDS 1049947..1051131 FT /transl_table=11 FT /locus_tag="DIP1069" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 39.1 kDa protein Rv3037c or MTV012.52C TR:O53284 FT (EMBL:AL021287) (358 aa) fasta scores: E(): 3.1e-43, 42.49% FT id in 353 aa, and to Streptomyces coelicolor Sc6g4.36C FT protein sc6g4.36C TR:O86799 (EMBL:AL031317) (426 aa) fasta FT scores: E(): 2.5e-18, 31.36% id in 322 aa" FT /protein_id="CAE49592.1" FT /translation="MSYTTDEVHFLLDLDAEITAVAGAITRDHAMTKATAVKDAATFHK FT HFGANGRAAMELCASRTSAQGKLPHDWLMCHDSSQQATPLTVAQQRAHRIHRVCGSEAI FT VHDVTCSIGTEGAAITDLGMAYHGSDLDMSRLLMARHNVPTGLFFQADALKRASTSSDV FT IIADPARRAEGRRITKPDQLIPPLPQLVDHWRIATTTAAPMAIKCAPGLDFQEWDGLVS FT VVSVAGGVKEACLYTPELSEGLTREAIMIGPDQSVDVLNDRHGGEVPAGDPGTFIIDPD FT GAVVRAGLVQHYAAREQLWMLDEHIAYLTGDRIPQGRSGFRFIEMVGLKQLKSALVAHD FT AGSLEILVRGVDVDPDQLRKKLKLKGNTPMAVICTRIGRKGVALICHAREHSQT" FT CDS 1051307..1052101 FT /transl_table=11 FT /gene="etfB" FT /gene_synonym="fixA" FT /locus_tag="DIP1070" FT /product="Electron transfer flavoprotein beta-subunit" FT /note="Similar to Mycobacterium tuberculosis electron FT transfer flavoprotein beta-subunit FixA or Rv3029c or FT MT3113 or MTV012.44c SW:ETFB_MYCTU (O53276) (266 aa) fasta FT scores: E(): 8.4e-45, 51.31% id in 267 aa" FT /protein_id="CAE49593.1" FT /translation="MPAIVALVKNVPDTWSVKKLEADYTLDRTNVDSVIDEINEYAVEQ FT ALRLRDDNPDAGYEVVALSLGPTNAEEALRKALAMGADRAVLLSDDSLAGSDVLGTAWA FT LHNAINQIPDVAMVVTGSASSDGSMGVVPGILSEYRQQPALTHLRSVAIVDGVVKGIRE FT THDGDFAVEAPLPAIISVTEKADKPRFPNFKGIMAAKKAEITRMALSSIGVAPEQVGLA FT HAATVVTAATERPVRVAGEVINTSSAEAAAKIADFLAAEKLI" FT misc_feature 1051316..1052068 FT /note="HMMPfam hit to PF01012, Electron transfer FT flavoprotein beta subunit" FT misc_feature 1051316..1052098 FT /note="BlastProDom hit to PD003528, PD003528" FT CDS 1052119..1053072 FT /transl_table=11 FT /gene="etfA" FT /gene_synonym="fixB" FT /locus_tag="DIP1071" FT /product="Electron transfer flavoprotein alpha-subunit" FT /note="Similar to Mycobacterium tuberculosis electron FT transfer flavoprotein alpha-subunit EtfA or FixB or Rv3028c FT or MT3112 or MTV012.43c SW:ETFA_MYCTU (O53275) (318 aa) FT fasta scores: E(): 1.8e-48, 51.1% id in 317 aa" FT /protein_id="CAE49594.1" FT /translation="MSTVYVLVEHANGQVLPATGELITAARPLGDVTAVVVGTPGSHEA FT LVSQIAEYSATAIVAAQVADADSRVVIPQADALSMLAAAQPGPILLDSGAHGNEIAGRL FT AARLASGVLCNVVGVNADRTAVMSIFGDTVDVSAAVGGASPIYTLRPGAVEAVPAPSQP FT AVSVMDIPATGVKDVKVSSFTPAAQGDRPDLSTAKVVIAGGRGVESAENFTTIVEPLAD FT ALNGAVGATRDAVDLGYYPAQYQVGQTGVTVSPDLYIGLGISGAIQHTSGMQTSKKIVV FT INNDADAPFFQIADLGVVGDIHEIAPLLVKEIAQRS" FT misc_feature 1052122..1052949 FT /note="HMMPfam hit to PF00766, Electron transfer FT flavoprotein alpha subunit" FT misc_feature 1052164..1052181 FT /note="ScanRegExp hit to PS00343, Gram-positive cocci FT surface proteins 'anchoring' hexapeptide." FT CDS 1053532..1054668 FT /transl_table=11 FT /locus_tag="DIP1072" FT /product="Putative aminotransferase, class V" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT aminotransferase, class V MT3109 TR:AAK47439 FT (EMBL:AE007129) (393 aa) fasta scores: E(): 1.1e-52, 45.71% FT id in 385 aa, and to Mycobacterium tuberculosis NifS-like FT protein Rv3025c or MTV012.40C TR:O53272 (EMBL:AL021287) FT (393 aa) fasta scores: E(): 1.1e-52, 45.71% id in 385 aa, FT and to Ruminococcus flavefaciens cysteine desulfurase IscS FT or NifS SW:ISCS_RUMFL (O54055) (396 aa) fasta scores: E(): FT 2.1e-40, 36.48% id in 381 aa" FT /protein_id="CAE49595.1" FT /translation="MQTRYFDHAATTPIRETARAAWLEYAGMANPASQYASGRAARSVL FT DTAREQISQLLGCEPIEVIFTASGTESDNIGVHGLWKSRQGQAPNRIVTTAIEHPGVLE FT TVKALEAHGANLDFLPVDSHGAIANVDALSTPAAVAAVMWANNETGAIQPIEKVIAAAK FT EVDTPVHVDAVQVVGHQHINFDVLGATTLAASAHKFGGPRGVGLLLARRSPAPQPVMFG FT GGQERSIRSGTVDVAGAAATAAALAEAVNEVDEETTRLRYLVNKLRDHVVATIDNTVVH FT TPRHSLPGHLHLSFPGAEGDSLIMLLDSLGLEASTGSACSNGVNRASHVLLAMGVSEST FT ARSTVRFTLGATTTEEDVDTLIAQLPDVVARARLAGMA" FT misc_feature 1053562..1054614 FT /note="HMMPfam hit to PF00266, Aminotransferase class-V" FT CDS complement(1054665..1055513) FT /transl_table=11 FT /locus_tag="DIP1073" FT /product="Putative transferase" FT /note="Similar to Streptomyces coelicolor hypothetical 30.6 FT kDa protein 2scc13.11C TR:Q9F3H8 (EMBL:AL442165) (289 aa) FT fasta scores: E(): 5.6e-28, 36.2% id in 279 aa, and to FT Neisseria meningitidis (serogroup A), and putative FT transferase nma1087 or nmb0869 TR:Q9JQL8 (EMBL:AL162755) FT (263 aa) fasta scores: E(): 1.6e-09, 26.42% id in 246 aa, FT and to Escherichia coli spermidine synthase spee or B0121 FT SW:SPEE_ECOLI (P09158) (287 aa) fasta scores: E(): 0.0013, FT 28.28% id in 152 aa" FT /protein_id="CAE49596.1" FT /translation="MGRKSKNSSQSHAHGPVPGVYPTTTGEVELRADSFLPHAFEVYVN FT GVPSSHIAQDPEQLEYEYMRWIAAIVDWFVTTHSDPKKLRVTHLGGGACTLARYVCHRY FT PNARNTVVELDATLATLVREWFDLPRSPQLKIRVGDAWEVAQTFVPSSRDVIIRDVFAG FT NQTPRRLTTVEFFQQCHQALSPGGLYVANCGDHRDLNVAKAEVQGLREVFDHVACIADP FT TMLKGRRYGNIILIATDTQLPTDQEQQVLTRLLLGGGVPAQFKGGNWTKNFSSSSTARH FT D" FT misc_feature complement(1054932..1055279) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS 1055670..1056770 FT /transl_table=11 FT /gene="trmU" FT /locus_tag="DIP1074" FT /product="probable tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase" FT /EC_number="2.1.1.61" FT /note="Similar to Mycobacterium tuberculosis probable tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase FT TrmU or Rv3024c or MT3108 or MTV012.39c SW:TRMU_MYCTU FT (O53271) (367 aa) fasta scores: E(): 1.8e-80, 60.94% id in FT 361 aa, and to Escherichia coli tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase FT TrmU or AsuE or MnmA or B1133 SW:TRMU_ECOLI (P25745) (368 FT aa) fasta scores: E(): 1.1e-39, 37.15% id in 366 aa" FT /protein_id="CAE49597.1" FT /translation="MRVLAAMSGGVDSAVAAARAVAAGHDVVGVHLALSQDPQTVRESS FT RGCCSLEDSADARRVCDKLGIPFYVWDFSDRFKEDVIDDFISSYEAGETPNPCLRCNEK FT IKFAALLERGIALGFDAVVTGHYARLTQPVDGGDGYLRRSIDPDKDQSYVLGVLGAHEI FT AHCMFPVGDTVKPKIREEAAAMGFSVAKKPDSYDICFIPDGNTQAFLGRHIGLRPGMIV FT DSDGNELKEHDGAWNYTIGQRKGLDIKQPAADGKPRYVTNIDAATGTVTVGSRENLKVI FT ALTADRLKYLHPAMTGSFEAEVQVRAHGSVVACSVMVNESDDTMRVELHTPLSGVARGQ FT AAVIYLPDDDGDIVLGSGTICATEHQ" FT misc_feature 1055670..1055735 FT /note="Signal peptide predicted for DIP1074 by SignalP 2.0 FT HMM (Signal peptide probability 0.868) with cleavage site FT probability 0.374 between residues 22 and 23" FT misc_feature 1055670..1056749 FT /note="HMMPfam hit to PF03054, tRNA methyl transferase" FT misc_feature 1056141..1056170 FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT CDS 1056799..1057866 FT /transl_table=11 FT /locus_tag="DIP1075" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML1706 TR:Q9CBR6 (EMBL:AL583923) (337 aa) fasta scores: FT E(): 4.5e-19, 32.26% id in 313 aa, and to Mycobacterium FT tuberculosis CDC1551 vitamin-b12 independent methionine FT synthase family protein MT3095 TR:AAK47424 (EMBL:AE007129) FT (337 aa) fasta scores: E(): 1.4e-18, 31.94% id in 313 aa, FT and to Mycobacterium tuberculosis hypothetical 34.2 kDa FT protein Rv3015c or MTV012.29C TR:O53262 (EMBL:AL021287) FT (337 aa) fasta scores: E(): 1.4e-18, 31.94% id in 313 aa" FT /protein_id="CAE49598.1" FT /translation="MTESVGFLESVACALGPMPGLDLYQAADVIVGETGDCMALPELVQ FT RGVTDQLVGRTCALLPELPVEKGPRSWRLSVRPQIATRRLWDGIERDLDDLEQQWGNAP FT IIKTRLMGPWSLATRIELANGHRAVTDRGAVRDIAAIMAEAIDDHCGDLRRRFGAQVVV FT QLHEPDAVALMHGTVPGTTDFDVIRAVHVKDLVEVLAPLVSSVQSHEHSAVVFSAISAA FT AVPQSESTAAAIELMRQSGATSMVINPHDLCGTKTLDACGNALSSGVGAIWALPAPGLS FT TPTPVGELVEDPERHAAIQLAKLIDEMGLDRSVLETSSVTQQLFTLPSTILDAARHLQH FT IVRVRTMLREDAGDL" FT CDS complement(1057910..1058614) FT /transl_table=11 FT /locus_tag="DIP1076" FT /product="Putative DNA polymerase" FT /note="Similar to Streptomyces coelicolor putative DNA FT polymerase SCBAC1A6.08 TR:Q9ADH9 (EMBL:AL589708) (244 aa) FT fasta scores: E(): 2.6e-12, 42.06% id in 233 aa, and to FT Rhodobacter capsulatus DNA polymerase III epsilon FT chain-like protein DnaQ SW:DP3E_RHOCA (O68045) (704 aa) FT fasta scores: E(): 0.0033, 31.7% id in 164 aa" FT /protein_id="CAE49599.1" FT /translation="MNNIAAPDQSFNPAHVLSFDLETTSANPFEARIVTSALVRIDSSG FT AHPVELLADPGVEIPEAASKVHGISTEYAREHGEPHEAVLKRTVDEIYAAWEEGFTLVV FT YNAPYDLTVLRQLTGDFVVKGPVYDPYLIDRIMDRFRKGKRTLTDLCSVYGVRMDNAHE FT ATSDALAAARIAWMQAKKRFKDDLAAYSHDELMEYQAVQYYELQKDMKKYLDGLGRDTS FT TVNFGWPMQNSR" FT misc_feature complement(1058063..1058572) FT /note="HMMSmart hit to SM00479, No definition" FT misc_feature complement(1058066..1058569) FT /note="HMMPfam hit to PF00929, Exonuclease" FT CDS 1058711..1060744 FT /transl_table=11 FT /gene="ligA" FT /gene_synonym="lig" FT /locus_tag="DIP1077" FT /product="DNA ligase" FT /EC_number="6.5.1.2" FT /note="Similar to Mycobacterium tuberculosis DNA ligase FT LigA or Lig or Rv3014c or MT3094 or MTV012.28c FT SW:DNLJ_MYCTU (O53261) (691 aa) fasta scores: E(): FT 4.7e-155, 60.86% id in 672 aa, and to Escherichia coli DNA FT ligase LigA or Lig or DnaL or PdeC or Lop or B2411 FT SW:DNLJ_ECOLI (P15042) (671 aa) fasta scores: E(): 4.4e-92, FT 41.58% id in 683 aa" FT /protein_id="CAE49600.1" FT /translation="MTDNFADLRRQWDDLAEQVRHHRDAYYNHTPEISDAEFDQLFRQL FT QQLEQEHPELAVPESPTLRVGAPVEQSSFDNVEHLERMLSLDNVFDAAELDDWLQRTPS FT ATYLTELKIDGLSIDLVYRSGRLERAATRGDGRVGEDVTANAKVIEDIPHRLQHSDAYP FT VPELVEIRGEVFIAVEDFALVNEQRQKEGGKPFANPRNAAAGSLRQKDTEAVRKRRLKM FT ICHGIGASEGFEADTQFDAYKALEAWGLPVSPYTKRVHSAQEVQERVTYWAQHRHDATH FT EMDGLVIKIDSFAEQRALGSTARAPRWAIAYKYPPEEVTTKLLDIQVGVGRTGRVTPFA FT VMDPVFVAGSTVEMATLHNQTEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVEKRDGSER FT EFIFPTLCPACGTRLAPQKEDDADWRCPNSQSCPAQLSSRLTYLAGRGAFDIEALGEKG FT AEDLIASGVLIDEAQLFNLTEDDLKRTKVYTTKAGALNATGEKLLANLESAKHTDLWRV FT LVALSIRHVGPTAARALAVRYRSLEALRAADVEDIANTEGVGAIIAQSFAQWFDVPWHR FT NIVEVWADAGVTMADSEADIPDQVLEGLTIVVTGSLVDFSRDSAKEAIVSRGGKASGSV FT SKKTSYVVVGENAGSKETKARDLGLRILNEDEFKQLLANGTV" FT misc_feature 1058726..1059661 FT /note="HMMPfam hit to PF01653, NAD-dependent DNA ligase" FT misc_feature 1058729..1060048 FT /note="BlastProDom hit to PD003944, PD003944" FT misc_feature 1058729..1060054 FT /note="HMMSmart hit to SM00532, Ligase N family" FT misc_feature 1059044..1059133 FT /note="ScanRegExp hit to PS01055, NAD-dependent DNA ligase FT signature 1." FT misc_feature 1059665..1059913 FT /note="HMMPfam hit to PF03120, NAD-dependent DNA ligase FT OB-fold domain" FT misc_feature 1059923..1060012 FT /note="HMMPfam hit to PF03119, NAD-dependent DNA ligase C4 FT zinc finger domain" FT misc_feature 1060325..1060417 FT /note="ProfileScan hit to PS50120, Helix-hairpin-helix FT motif." FT misc_feature 1060496..1060741 FT /note="ProfileScan hit to PS50172, BRCT domain profile." FT misc_feature 1060502..1060735 FT /note="HMMPfam hit to PF00533, BRCA1 C Terminus (BRCT) FT domain" FT /note="HMMSmart hit to SM00292, breast cancer FT carboxy-terminal domain" FT stem_loop 1060754..1060799 FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(1060807..1061469) FT /transl_table=11 FT /locus_tag="DIP1078" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 23.0 kDa protein Rv3013 or MTV012.27 TR:O53260 FT (EMBL:AL021287) (218 aa) fasta scores: E(): 2.6e-27, 40.63% FT id in 219 aa, and to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT3093 TR:AAK47422 FT (EMBL:AE007128) (240 aa) fasta scores: E(): 2.8e-27, 40.63% FT id in 219 aa, and to Mycobacterium leprae hypothetical 24.4 FT kDa protein MLCB637.11c TR:O33103 (EMBL:Z99263) (230 aa) FT fasta scores: E(): 1.3e-26, 40.18% id in 219 aa, and to FT Mycobacterium leprae hypothetical protein ML1704 TR:Q9CBR7 FT (EMBL:AL583923) (232 aa) fasta scores: E(): 1.3e-26, 40.18% FT id in 219 aa" FT /protein_id="CAE49601.1" FT /translation="MSYLIRVQIPDEPGSLGRVAEAVGLIGGNISSVDVVEAFSNGTVT FT DDMVVELPAGTMADELITAAHEVEGVEVDSIRPFSGRVDRRGQIAMLASVAGASTNSTL FT LADMVNKMPQALTSSWAILLRAKNPVTRVTASNGAPADDGSNPSALPIEQARILQPEKE FT SWIPESWAILDSSLIAAPLTGTDLVLVIGRVGGPDYLSSEIEHIGNLGKILGSLLKH" FT misc_feature complement(1061017..1061103) FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT misc_feature complement(1061242..1061463) FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 1061719..1062018 FT /transl_table=11 FT /gene="gatC" FT /locus_tag="DIP1079" FT /product="glutamyl-tRNA(Gln) amidotransferase subunit C" FT /EC_number="6.3.5.-" FT /note="Similar to Streptomyces coelicolor FT glutamyl-tRNA(Gln) amidotransferase subunit C GatC or FT SC8D9.10 SW:GATC_STRCO (Q9Z581) (98 aa) fasta scores: E(): FT 5.7e-16, 58.16% id in 98 aa, and to Mycobacterium FT tuberculosis glutamyl-tRNA(Gln) amidotransferase GatC or FT Rv3012c or MT3092 or MTV012.26C SW:GATC_MYCTU (O53259) (99 FT aa) fasta scores: E(): 4.1e-12, 53.6% id in 97 aa" FT /protein_id="CAE49602.1" FT /translation="MPEISRDEVAHLAKLSRLALTDEELDRFAEQIDGIIGNVSAVQQV FT AAEGVEPMSHPHSIKTTMREDVVEQILTPEQALDQAPAVDQQRFVVPQILGEQD" FT misc_feature 1061776..1061991 FT /note="HMMPfam hit to PF02686, Glu-tRNAGln amidotransferase FT C subunit" FT CDS 1062018..1063502 FT /transl_table=11 FT /gene="gatA" FT /locus_tag="DIP1080" FT /product="glutamyl-tRNA(Gln) amidotransferase subunit A" FT /EC_number="6.3.5.-" FT /note="Similar to Mycobacterium tuberculosis FT glutamyl-tRNA(Gln) amidotransferase subunit A GatA or FT Rv3011c or MT3091 or MTV012.25C SW:GATA_MYCTU (O53258) (494 FT aa) fasta scores: E(): 9.4e-131, 74.53% id in 479 aa, and FT to Streptomyces coelicolor glutamyl-tRNA(Gln) FT amidotransferase subunit A GatA or SC8D9.11 SW:GATA_STRCO FT (Q9Z580) (497 aa) fasta scores: E(): 1.3e-117, 68.46% id in FT 482 aa" FT /protein_id="CAE49603.1" FT /translation="MNKYLVPDSGLTSLSAAELAEKIHSREVTSREVTQAHLDRINDVD FT GTLHAFLHVGVEEALAAADAVDESLDKGEAPASALAGVPLALKDVFVTTDAPTTCASKM FT LEGYVAPYDATVTKKIREAGIPILGKTNMDEFAMGSSTENSAYGPTLNPWDIERTPGGS FT GGGTSAALASGEAPLGIGTDTGGSIRQPAALTNTVGVKPTYGTVSRYGLVACASSLDQG FT GPTARTVLDTALLHEVIAGHDKYDATSVNRAVAPVVAAAREGARGDLKGTKIGVVKQFD FT REGYQPGVLEQFHKSVEQLTAQGAEIVEVDCPHFDDALAAYYLILPCEVSSNLARFDGM FT RYGLREGDDGTHSAEEVMSLSRAAGFGPEVKRRIILGTYALSVGYYDAYYLQAQRVRTL FT IAQDFAVAYDKCDVLVSPTTPTTAFKLGEKVSDPLAMYNFDLCTLPLNLAGLCGMSLPS FT GLAPDSQLPTGLQIMAPAFQDDRLYKVGAAFEVGQK" FT misc_feature 1062111..1063466 FT /note="HMMPfam hit to PF01425, Amidase" FT misc_feature 1062387..1062410 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1062498..1062593 FT /note="ScanRegExp hit to PS00571, Amidases signature." FT CDS complement(1063604..1064095) FT /transl_table=11 FT /locus_tag="DIP1081" FT /product="Putative acetyltransferase" FT /note="Similar to Bacillus halodurans ribosomal-protein FT (S18)-alanine acetyltransferase BH0547 TR:Q9KFD4 FT (EMBL:AP001508) (151 aa) fasta scores: E(): 0.0026, 52.83% FT id in 53 aa, and to Homo sapiens similar to FT spermidine/spermine N1-acetyl transferase TR:AAH11751 FT (EMBL:BC011751) (170 aa) fasta scores: E(): 0.0061, 28.85% FT id in 149 aa" FT /protein_id="CAE49604.1" FT /translation="MSASEFTLVPTTESDRTYIARLNFLTDVFGDEHADIGADFLEDYR FT FYVKQWDPTNGGLIAWSPKMIPAGGAWLVWGNNNDHGYGYVSEDIPEVAIAIEPRYRGK FT GVGSILLNKSLELARTLGAPGLSLSVDDGNPRAKKLYERLGFQHIRHSDAGFSIMCYRF FT " FT misc_feature complement(1063655..1063924) FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family" FT CDS 1064159..1065574 FT /transl_table=11 FT /locus_tag="DIP1082" FT /product="transmembrane efflux protein, major facilitator FT family" FT /note="Similar to Mycobacterium tuberculosis CDC1551 drug FT transporter MT1289 TR:AAK45547 (EMBL:AE007004) (579 aa) FT fasta scores: E(): 9.3e-70, 43.87% id in 449 aa, and to FT Streptomyces coelicolor putative transmembrane efflux FT protein SCD82.12 TR:Q9L0L9 (EMBL:AL160431) (490 aa) fasta FT scores: E(): 5.7e-43, 31.79% id in 456 aa, and to FT Streptomyces glaucescens tetracenomycin C resistance and FT export protein TcmA SW:TCMA_STRGA (P39886) (538 aa) fasta FT scores: E(): 3.5e-39, 31.29% id in 425 aa" FT /protein_id="CAE49605.1" FT /translation="MLSTATKSDTQYPTMPLPEKEAWPALIALCIGFFMILLDQTIVAV FT ATPALQADLHASYNEVIWVTSAYLLTFAVPLLITGRLGDRFGPKNIYIIGMVIFTLSSL FT ACGFAPNMMTLIIARAVQGIGASMLTPQTMSVINRVFARERRGAALGIWGSVAGIASLA FT GPILGGFITAWVGWQWIFFINVPIGVVSVFAVARFVPRFKPTERSIDGLSMVLSVVSVF FT ALVFALQQGESAGWAWWIWVVMVVGIAVGVLFAYQQNRAEAKGKDALMPLSLFRVRNFS FT LGNIGIAAMGFTIAGTPLPIMLYLQQVHSLTPLQAGLFMMPQALISAFFSPLIGRWSDH FT YSTSKLAGFGFSTMAMGLVLIAAVMIIDVNLWWLVPAFIVYGLGNAFVWSPNSTSTMRD FT LPLHHMGVGSGVYNTTRQIGCVIGSAAIGAVLQWRIMAGDMGAAYGQSIILGAVMLAVG FT FVSAMLAQDKPRR" FT misc_feature 1064159..1070098 FT /note="Putative iron uptake system. Low GC content FT (49.78%)" FT misc_feature 1064228..1065379 FT /note="HMMPfam hit to PF00083, Sugar (and other) FT transporter" FT misc_feature order(1064228..1064296,1064339..1064407,1064426..1064494, FT 1064504..1064572,1064606..1064674,1064687..1064755, FT 1064792..1064845,1064858..1064926,1064996..1065064, FT 1065092..1065160,1065194..1065259,1065272..1065325, FT 1065410..1065469,1065482..1065550) FT /note="14 probable transmembrane helices predicted for FT DIP1082 by TMHMM2.0" FT misc_feature 1064240..1064314 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 1064513..1064575 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 1064603..1064677 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT misc_feature 1065212..1065274 FT /note="FPrintScan hit to PR01036, Tetracycline resistance FT protein TetB signature" FT CDS complement(1065633..1065968) FT /transl_table=11 FT /locus_tag="DIP1083" FT /product="Conserved putative integral membrane protein" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein SCE6.24 TR:Q9KZR4 (EMBL:AL353832) (100 aa) fasta FT scores: E(): 4.1e-13, 49.47% id in 95 aa" FT /protein_id="CAE49606.1" FT /translation="MTTFMGFDVKPANKVSTAPVVATGLIGGWLTARETGIRPLGGVVL FT AAAGIWAGRSWWARGGATRTAALSAVYIAAFGASHPLAKKIGAWPSVVSVTAATAAAAY FT LINDAAQ" FT misc_feature complement(1065639..1065833) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(order(1065651..1065710,1065795..1065851, FT 1065873..1065923)) FT /note="3 probable transmembrane helices predicted for FT DIP1083 by TMHMM2.0" FT CDS 1066370..1067410 FT /transl_table=11 FT /locus_tag="DIP1084" FT /product="Putative iron transport membrane protein, FT FecCD-family" FT /note="Similar to Streptomyces coelicolor putative FT FecCD-family membrane transport protein SC2H12.15 TR:Q9K469 FT (EMBL:AL359215) (368 aa) fasta scores: E(): 2.3e-50, 48.1% FT id in 343 aa, and to Yersinia pestis hemin transport system FT permease protein HmuU YPO0280 SW:HMUU_YERPE (Q56992) (334 FT aa) fasta scores: E(): 6.8e-30, 36.33% id in 344 aa" FT /protein_id="CAE49607.1" FT /translation="MIRRLTTPVLFIALLIVAAVSFVISLSFGSVDYPQEQVWAVVKAH FT LAGDVYPDQSIDAVVWELRAPRGVLALIVGAGLALAGVAMQTLVRNPLADPYLLGISSG FT ASVGATAVLVFGLLGNFGLYALSGGALVGAIIATFAVYAVTLAQGGLTPLRLILSGVVL FT SSAFSALASFLVFKGPDARAAQGVMFWMLGSVAGAQWGKLAIPAVVVALAFAGLLFINR FT QMDALAAGPDTAAALGVNVPALRQGLFFLQAMLVGAMVAVAGGIGFVGLVIPHLARMMV FT GSLHRRLLPIAAAFGAVFMVWVDVLARVAAPPQEIPLGVVTGVIGAPLFLILMGRKSYR FT FGGQES" FT misc_feature 1066370..1066456 FT /note="Signal peptide predicted for DIP1084 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.479 between residues 29 and 30" FT misc_feature order(1066388..1066456,1066568..1066636,1066655..1066723, FT 1066733..1066801,1066835..1066903,1066961..1067029, FT 1067048..1067116,1067129..1067197,1067234..1067302, FT 1067315..1067374) FT /note="10 probable transmembrane helices predicted for FT DIP1084 by TMHMM2.0" FT misc_feature 1066454..1067377 FT /note="HMMPfam hit to PF01032, FecCD transport family" FT misc_feature 1067189..1067380 FT /note="BlastProDom hit to PD001557, PD001557" FT CDS 1067410..1068207 FT /transl_table=11 FT /locus_tag="DIP1085" FT /product="Putative iron ABC transport system, ATP-binding FT protein" FT /note="Similar to Bacillus subtilis ferrichrome transport FT ATP-binding protein FhuC SW:FHUC_BACSU (P49938) (269 aa) FT fasta scores: E(): 5.1e-24, 35.15% id in 256 aa, and to FT Escherichia coli iron(III)dicitrate transport ATP-binding FT protein FecE or B4287 SW:FECE_ECOLI (P15031) (255 aa) fasta FT scores: E(): 5.5e-24, 37.86% id in 243 aa" FT /protein_id="CAE49608.1" FT /translation="MHCQAQGIACGFDTKTTILKDISFSVDQGTMTAIVGVNGVGKSTL FT LRALAGITQPHAGVVTVNGHDIHKIRAKKRAMMLTFVGQEEQPPADLSVEEVVALGRLP FT YIKSWQLGSKNERDIVEHSLDLVGLAGRRKALCSELSGGQRRRVLLARGFAQQTDLVFL FT DEPTNHLDVQHQLHLLHVLRDSGRTIVATIHDLDLAVSHFDQVVVVGNGGVVAAGSPQE FT VLTPEIVSQVFGVESLLVQLEQARRVHLLIDALSHQPHLSPKE" FT misc_feature 1067491..1068048 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 1067494..1068045 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 1067500..1067577 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 1067515..1067538 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1067767..1067799 FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT misc_feature 1067827..1067871 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 1067827..1068033 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 1068219..1069283 FT /transl_table=11 FT /locus_tag="DIP1086" FT /product="Putative iron transport system exported FT solute-binding component" FT /note="Similar to Streptomyces coelicolor putative iron FT transport lipoprotein SC2H12.17 TR:Q9K467 (EMBL:AL359215) FT (345 aa) fasta scores: E(): 8.3e-30, 36.76% id in 321 aa, FT and to Yersinia pestis hemin-binding periplasmic protein FT HmuT precursor YPO0281 SW:HMUT_YERPE (Q56991) (279 aa) FT fasta scores: E(): 0.022, 22.69% id in 282 aa" FT /protein_id="CAE49609.1" FT /translation="MKSKLFPLLVPILGASIVLAGCSNADTSKQAESKGGVTITNCGKE FT VTYTKADNLFVNDGNIISIALAAGAADNVKYVSSVQRDKELLHAKYGKDIDKAEDVAKE FT YPSLESIVAKHPDIFVAGWNYGFSEEKNLTPDALKDQGIDSYILSESCRQEGSEKRGLY FT DPWEAVKMDISNIGKITSHADTADSVVKDIDSRLETLKKAPQADKAPTAFVFDSGTDTV FT FTSGKFGAPQAIIEAAGGRNGAENVEDTWTTVSWENLAASKPDVFVFVDYPGQEFEEKI FT AALRSNPATKNLPAVKENRFINLPYAMWTSGPLNIDAAEQMRKGFEKFGLVPSSEIKPS FT LELPASVPGQNYYK" FT misc_feature 1068219..1068293 FT /note="Signal peptide predicted for DIP1086 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.606 between residues 25 and 26" FT misc_feature 1068369..1069136 FT /note="HMMPfam hit to PF01497, Periplasmic binding protein" FT CDS 1069391..1070098 FT /transl_table=11 FT /locus_tag="DIP1087" FT /product="Putative integral membrane protein containing FT helix-turn-helix motif" FT /note="No significant database matches" FT /protein_id="CAE49610.1" FT /translation="MYGQRHKFLEFESSFQRANARFVFLFASLYGCGFIAVALGHALVG FT FLVLIAVFIPLLIKTSRGIRLGRQTADDASVMRRKYDQIVLIIAIVMPSAINIVRDLSR FT AGAVVLAVIATVVFYFLAQSWYGGFKDTAELVRGDSNECIELTDDQLSYLAVLWAARCA FT VGFQEMKLTRLAKETRLSHEVVQKITQIFISQGIVSVFEEYGPSGQKDVAWVQLTEHGC FT GLAKNLERVSSHS" FT misc_feature order(1069451..1069504,1069514..1069582,1069640..1069699, FT 1069709..1069777) FT /note="4 probable transmembrane helices predicted for FT DIP1087 by TMHMM2.0" FT misc_feature 1069895..1069960 FT /note="Predicted helix-turn-helix motif with score 1165 FT (+3.15 SD) at aa 169-190, sequence MKLTRLAKETRLSHEVVQKITQ" FT CDS 1070298..1071326 FT /transl_table=11 FT /gene="pfkA" FT /locus_tag="DIP1088" FT /product="6-phosphofructokinase I" FT /EC_number="2.7.1.11" FT /note="Similar to Mycobacterium leprae FT 6-phosphofructokinase PfkA or MLl1701 or MLCB637.14 FT SW:K6PF_MYCLE (O33106) (343 aa) fasta scores: E(): 4.5e-87, FT 63.84% id in 343 aa, and to Streptomyces coelicolor FT 6-phosphofructokinase 2 PfkA2 or Pfk2 or SC6A11.02 FT SW:K6P2_STRCO (Q9L1L8) (341 aa) fasta scores: E(): 2.1e-75, FT 56.43% id in 342 aa" FT /protein_id="CAE49611.1" FT /translation="MRIATLTSGGDCPGLNAVIRGIVRTCSEYGSTVVGYQDGWVGLME FT DKRIQLYDDENIDRILLRGGTILGTGRLHPDKFKSGLDQIKANLEDAGIDALIPIGGEG FT TLKGAKWLSDNGIPVVGVPKTIDNDVNGTDYTFGFDTAVSVATDAIDRLHTTAESHNRV FT MIVEVMGRHVGWIALHAGMAGGAHYTVIPEQPFDIAEICKAMERRFQMGEKYGIIVVAE FT GALPKEGTMDFVEGGVDQFGHQTFNGIGQVIGEEIKKRLGHDVRTTVLGHIQRGGTPTS FT YDRVLATRYGVHAARACHNGDYGKMVALHGEHIDLIPLEDAVDTLKTVPEGRYRTARAL FT FG" FT misc_feature 1070301..1070987 FT /note="HMMPfam hit to PF00365, Phosphofructokinase" FT misc_feature 1070301..1071188 FT /note="BlastProDom hit to PD000707, PD000707" FT misc_feature 1070310..1070369 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1070385..1070426 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1070574..1070624 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1070655..1070708 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1070709..1070765 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1070769..1070819 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1070823..1070876 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1070931..1070969 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1071060..1071197 FT /note="HMMPfam hit to PF00365, Phosphofructokinase" FT misc_feature 1071081..1071149 FT /note="FPrintScan hit to PR00476, ATP-dependent FT phosphofructokinase family signature" FT misc_feature 1071093..1071149 FT /note="ScanRegExp hit to PS00433, Phosphofructokinase FT signature." FT CDS 1071435..1072940 FT /transl_table=11 FT /gene="gatB" FT /locus_tag="DIP1089" FT /product="glutamyl-tRNA(Gln) amidotransferase subunit B" FT /EC_number="6.3.5.-" FT /note="Similar to Mycobacterium tuberculosis FT glutamyl-tRNA(Gln) amidotransferase subunit B GatB or FT Rv3009c or MT3089 or MTV012.23c SW:GATB_MYCTU (O53256) (509 FT aa) fasta scores: E(): 1.3e-128, 68.75% id in 496 aa, and FT to Streptomyces coelicolor glutamyl-tRNA(Gln) FT amidotransferase subunit B GatB or SC8D9.13 SW:GATB_STRCO FT (Q9Z578) (504 aa) fasta scores: E(): 3e-124, 66.39% id in FT 494 aa" FT /protein_id="CAE49612.1" FT /translation="MTAAMYDLMDYDEVLEKFDPVMGLEVHVELATETKMFSAPSAHFG FT AEPNSNVDPVSLGLPGALPVVNAKGVEWAIKIGLALNCKIAESSRFARKNYFYPDQPKN FT YQISQYDEPIAYDGYLDVVLDDGTPWRVEIERAHMEEDTGKLTHLGGADGRIHGATASL FT VDCNRAGIPLIEIVTKPIEGAGERAPEVARAYVGALRDLVKALGVSDARMDQGSMRCDA FT NVSLRPVGTVEFGTRTETKNINSLKSVEQAVRYEMQRQAQVLEDGGEIVQETRHYQETD FT GSTSKGRPKETAEDYRYFNDPDLPPVIAPKEWVEEIRATLPELPWIRRARIQKEWGLKD FT EEMRDLVNAGALDLIVETVEAGASASEARSWWVAYLSQKANESGVELDSLSITPQQVAR FT VAALVKEGKLTNKLARQAVDGVLAGEGDVDEVVAARGLEVVRDDGAIEKAVDEALAANP FT DIVEKYKAGNTKVTGAIVGAVMKATRGKADPAQVNKLIAEKLA" FT misc_feature 1071480..1072235 FT /note="HMMPfam hit to PF02934, PET112 family, N terminal FT region" FT misc_feature 1072284..1072490 FT /note="HMMPfam hit to PF01162, PET112 family, C terminal FT region" FT misc_feature 1072491..1072934 FT /note="HMMPfam hit to PF02637, GatB/Yqey domain" FT CDS 1073046..1074143 FT /transl_table=11 FT /locus_tag="DIP1090" FT /product="Putative aldo/keto-reductase family protein" FT /note="Similar to Escherichia coli ORF_O346 B3001 TR:Q46851 FT (EMBL:U28377) (346 aa) fasta scores: E(): 2.5e-73, 56.21% FT id in 354 aa, to Streptomyces coelicolor putative FT oxidoreductase SC7H9.06 TR:Q9EWJ0 (EMBL:AL450223) (348 aa) FT fasta scores: E(): 1.6e-65, 58.48% id in 342 aa, and to FT Homo sapiens voltage-gated potassium channel beta-2 subunit FT KcnAB2 or KcnA2B or KcnK2 TR:Q13303 (EMBL:U33429) (367 aa) FT fasta scores: E(): 9.5e-27, 34.74% id in 331 aa" FT /protein_id="CAE49613.1" FT /translation="MTYSRQAAQVYTPAVQRYEDMEYRQCGHSGLRLPAISLGFWHNFG FT DDKPLANQRAIVRRAFDRGITHFDLANNYGPPEGSAEINFGRIFREDLARHRDEIVIST FT KAGWNMGAGPYSFGGSRKYLMDSLDSSLDRLGLDHVDIFYHHRPDPDTPLEETAYALRD FT IVASGKARYVGISSYGPELTAEISEILAGEGCPLLIHQPSYSILNRWVEEPGEDGENLL FT ESAANNGLGVIAFSPLAQGLLTDRYLEGVPVDSRAAAGKSLGKEMLNAKNLDMVRALND FT LALRRGQTLAQLAIAWVLREQGDYGATTVTSALIGASSVAQLDQNLGALNNLEFSVEER FT NYIDTVAKDAGINIWAGATASKVHD" FT misc_feature 1073124..1074095 FT /note="HMMPfam hit to PF00248, Aldo/keto reductase family" FT CDS complement(1074172..1074858) FT /transl_table=11 FT /gene="lysE" FT /locus_tag="DIP1091" FT /product="lysine exporter protein" FT /note="Similar to Corynebacterium glutamicum lysine FT exporter protein LysE SW:LYSE_CORGL (P94633) (233 aa) fasta FT scores: E(): 3.8e-40, 45.02% id in 231 aa, and to FT Escherichia coli hypothetical protein YggA or B2923 FT SW:YGGA_ECOLI (P11667) (211 aa) fasta scores: E(): 3.1e-09, FT 32.44% id in 225 aa" FT /protein_id="CAE49614.1" FT /translation="MSIAIAGFLMGLSLIVAIGPQNALIIRQGIKREGLIPILVVCILS FT DVILIFGGTAGVGALVDRAPIALVVLKWLGVAYLLYFGFTCFKEAFKRHGQALAVEQSE FT PVAYEPVADASSGVITKTRTKAQPKSAQRTWVKPVLAALAFTWLNPAAYIDVLVMLGGI FT ANQHGPDGRWVFALGALCASLTWFPFIGYTSTRFSTVLSRPAVWRYINIAIGIIMMIMC FT ARLIMH" FT misc_feature complement(1074178..1074825) FT /note="ProfileScan hit to PS50282, Bacterial transmembrane FT transporters, lysE/yggA family." FT misc_feature complement(order(1074178..1074243,1074280..1074345, FT 1074376..1074441,1074598..1074663,1074679..1074744, FT 1074784..1074849)) FT /note="6 probable transmembrane helices predicted for FT DIP1091 by TMHMM2.0" FT misc_feature complement(1074256..1074666) FT /note="HMMPfam hit to PF01810, LysE type translocator" FT CDS 1074929..1075810 FT /transl_table=11 FT /gene="lysG" FT /locus_tag="DIP1092" FT /product="lysine export transcriptional regulatory protein FT LysG" FT /note="Similar to Corynebacterium glutamicum lysine export FT transcriptional regulatory protein LysG SW:LYSG_CORGL FT (P94632) (290 aa) fasta scores: E(): 3.2e-70, 62.54% id in FT 291 aa, and to Streptomyces coelicolor putative LysR-family FT transcriptional regulator SC5F8.17c TR:Q9K4K7 FT (EMBL:AL357613) (300 aa) fasta scores: E(): 3.8e-43, 46.8% FT id in 297 aa, and to Rhodococcus fascians AttR protein FT TR:CAC43333 (EMBL:AJ311775) (320 aa) fasta scores: E(): FT 2.2e-37, 43.43% id in 297 aa" FT /protein_id="CAE49615.1" FT /translation="MNPLHLETLLAIIDEGSFEDAAFALGISPSAVSQRIKALERETGR FT VVVRRTSPVTATDAGEVLVQSARRMALLQAETNAQLRGRIERIPLSVAVNADSLATWFR FT RVMASVAEMDNATLHMRIEDESHSLSLLRRGDVLGAVTGEKTPVSGCDSIALGAFRYFA FT VASPKLLDRYTIDGAVDWERMPVLRFGPRDGLQDRDIKRRLGEVPAGRRVNEIPSSEAF FT MEAARVGLGWAMLPDIQALPLLDSGEVVMLDSEVHEVPLYWQRWRLESPALERLTQAVV FT DAALEGLHPLSA" FT misc_feature 1074941..1075348 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family" FT misc_feature 1074974..1075039 FT /note="Predicted helix-turn-helix motif with score 2081 FT (+6.27 SD) at aa 16-37, sequence GSFEDAAFALGISPSAVSQRIK" FT misc_feature 1074977..1075069 FT /note="ScanRegExp hit to PS00044, Bacterial regulatory FT proteins, lysR family signature." FT CDS complement(1075821..1076903) FT /transl_table=11 FT /locus_tag="DIP1093" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces lividans and S. coelicolor FT hypothetical 38.1 kDa protein 3SCF60.09 TR:O85700 FT (EMBL:AF072709) (341 aa) fasta scores: E(): 4.8e-70, 54.38% FT id in 331 aa, and to Rhodobacter sphaeroides hypothetical FT 38.5 kDa protein ORF11 TR:O33560 (EMBL:AJ000977) (333 aa) FT fasta scores: E(): 5.6e-48, 45.28% id in 318 aa" FT /protein_id="CAE49616.1" FT /translation="MSTTTIVVDMSTQYEKYTSTENGGEFIRDTQYIDDRIVDSVSAPT FT PLEDGHTLWPAEPRRYRLVAARACPWAHRTVITRRLKGLEDVISLGLVGPTHDWRSWTF FT DLDPNEVDPVLGIPRLRDAYLKRFPDYPHGITVPAIVEVATGKIVTNDYPSIVCDLNDQ FT WSKYERPGAPDLYPETLREEIDAITKRIFTEVNNGVYRCGFAGSQEAYDKAYDRLFTAV FT DWLEERLSHQRYLVGKHITIADIYLYTTLVRFDAVYHGHFKCNRNKITEMPNLWGYLRD FT LFQTPGFGDTTDFTEIKQHYYITHQDVNPTQIVPKGPSLESFFSPHGREKLGDSPFTEG FT VTPPGEISYEERLKNKIDGQ" FT misc_feature complement(1076046..1076282) FT /note="HMMPfam hit to PF00043, Glutathione S-transferase, FT C-terminal domain" FT misc_feature complement(1076049..1076243) FT /note="ProfileScan hit to PS50405, Glutathione FT S-transferase profile (C-terminal sub-domain)." FT CDS 1076975..1077727 FT /transl_table=11 FT /locus_tag="DIP1094" FT /product="Conserved hypothetical exported protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 25.9 kDa protein Rv2972c or MTCY349.15 TR:P95123 FT (EMBL:Z83018) (237 aa) fasta scores: E(): 3.4e-25, 36.55% FT id in 238 aa, and to Streptomyces coelicolor putative FT lipoprotein SCE41.16c TR:Q9F2P3 (EMBL:AL442120) (258 aa) FT fasta scores: E(): 1.5e-19, 37.86% id in 169 aa. Note: FT Contains a putative twin-arginine translocation (TAT) FT system recognition motif (RRSFIRK) at the N-terminal FT region" FT /protein_id="CAE49617.1" FT /translation="MRARRRSFIRKISRLLAGFAVVMASAVVIQGSWSGLEPQRWEDSI FT RDVLSPAATAEVDPSRADVIALNALTIDDSFGDKPAYSRTHFGNNWADNVSVAGGHNGC FT DTRNDILQRDLTNIVFRPGTRNCVVSTGNLHDLYSGVDVAFTRGPKTSTMVEIDHVVAL FT GNAWYAGAWQWDDETRRNFANDPINLQATTHAENQAKKAKTADRWMPSDPQYHCTYAQR FT QTTIKSTYGLTVTSREKDALMKALATCS" FT misc_feature 1076975..1077076 FT /note="Signal peptide predicted for DIP1094 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.395 between residues 34 and 35" FT misc_feature 1076987..1077007 FT /note="Potential twin-arginine recognition motif RRSFIRK" FT CDS 1077807..1078934 FT /transl_table=11 FT /locus_tag="DIP1095" FT /product="Conserved hypothetical integral membrane protein" FT /note="Similar to Mycobacterium leprae hypothetical 29.5 FT kDa protein ML1698 or MLCB637.18 TR:O33110 (EMBL:Z99263) FT (277 aa) fasta scores: E(): 6.4e-10, 30.79% id in 276 aa, FT and to Mycobacterium tuberculosis hypothetical 28.9 kDa FT protein Rv3005c or MTV012.19c TR:O53252 (EMBL:AL021287) FT (279 aa) fasta scores: E(): 1.3e-08, 28.15% id in 277 aa" FT /protein_id="CAE49618.1" FT /translation="MADNNIPDRASDFDDDIPTYNGGGNNGAETSSAPNSAHQGAPKKL FT GSGLSAAEIYARAGRAAPQSISPQRPAAKVVANSENENKKDTEVVAPDTQPEDSYKTTI FT IERPAVAPQPVLNDDPHSKPLASDAPTTVYPVAQPQPAEPEPAPVTDYHDEDFAPTPAT FT PVAPATAIAEPVPAPVAAPAVAPAVAPMVTASNQPVHNGEPHRRGTIDFGILVLRLFFG FT TWLILKSVTVFFAMGSHGGINALQEQFGAYPYASTLAVAIPALELAAGVFLVFGLLTPV FT ASALAIIATSFMALHGITKAGGIDIFDHESSVWFAIFLLIIAVVLQFTGPGKYSFDISR FT TWAIRPLASSWVFVVVAVAAAVALWWFGAAVNPFA" FT misc_feature 1078128..1078376 FT /note="ProfileScan hit to PS50099, Proline-rich region." FT misc_feature order(1078449..1078517,1078560..1078628,1078632..1078700, FT 1078743..1078811,1078845..1078913) FT /note="5 probable transmembrane helices predicted for FT DIP1095 by TMHMM2.0" FT CDS complement(1079011..1080852) FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="DIP1096" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /note="Similar to Streptomyces coelicolor dihydroxy-acid FT dehydratase IlvD or SCE7.12c SW:ILVD_STRCO (O69198) (617 FT aa) fasta scores: E(): 1.7e-161, 67.9% id in 617 aa, and to FT Escherichia coli dihydroxy-acid dehydratase IlvD or B3771 FT SW:ILVD_ECOLI (P05791) (616 aa) fasta scores: E(): FT 1.4e-155, 67.37% id in 613 aa" FT /protein_id="CAE49619.1" FT /translation="MFPLRSRVTTVGRNAAGARALWRATGTKDNEFGKPIVAIVNSYTQ FT FVPGHVHLKNVGDIVAEAVRAAGGVPKEFNTIAVDDGIAMGHGGMLYSLPSREIIADSV FT EYMVNAHTADAMVCISNCDKITPGMLNAALRLNIPAVFVSGGPMEAGKAVVADGIAHAP FT TDLITAITASAKDSVNDDQLLSIEQSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGT FT TLATHTARRELFETAGKLVVDLCQRYYGEEDESVLPRNIATKKAFINAMALDMAMGGST FT NTVLHTLAAAQEGEIDFDLSDIDALSHRIPCLSKVAPNGNYHIEDVHRAGGIPAILGEL FT RRRDLLEKGVHTVLYKEMDSWLDDWDIRGGKATDKAIELFHAAPGGVRTTEPFSQSNRW FT DSLDTDQARGCIHDVDHAYSADGGLVILRGNLAPDGAVVKAAGVDESIWTFSGPARVVE FT SQEEAVSIILDKQVQPGDVVVIRYEGPAGGPGMQEMLHPTSFLKGAGLGKACALITDGR FT FSGGTSGLSIGHISPEAAHGGLIGLVENGDTITIDIRNRSLNLDVDDAVIEQRRAAMLE FT REKPWTPTNRNRPVSKALRAYASMATSADKGAVRQLD" FT misc_feature complement(1079167..1080663) FT /note="HMMPfam hit to PF00920, Dehydratase family" FT misc_feature complement(1079173..1080657) FT /note="BlastProDom hit to PD002691, PD002691" FT misc_feature complement(1079287..1079322) FT /note="ScanRegExp hit to PS00887, Dihydroxy-acid and FT 6-phosphogluconate dehydratases signature 2." FT misc_feature complement(1080457..1080489) FT /note="ScanRegExp hit to PS00886, Dihydroxy-acid and FT 6-phosphogluconate dehydratases signature 1." FT CDS complement(1081141..1081626) FT /transl_table=11 FT /locus_tag="DIP1097" FT /product="Putative low molecular weight protein antigen 6" FT /note="Similar to Mycobacterium tuberculosis low molecular FT weight protein antigen 6 Cfp6 or Rv3004 or MT3084.1 or FT MTV012.18 SW:CFP6_MYCTU (O53251) (112 aa) fasta scores: FT E(): 7.9e-07, 34.57% id in 107 aa" FT /protein_id="CAE49620.1" FT /translation="MNSDTTVVFRPERTHLLAAGVMLAIMLLVIGARPALLFWLPIIPL FT VFILWVLRSSTTVSESGIEARYLAAATKAARWEEIQGVSFKGSKTILHTNDGRSFPLPA FT VSFNSLPQLETASRGRIPDALTQGKMAADEKIVIVHRDGYQEMLTKEQYEQRQAENK" FT misc_feature complement(1081471..1081536) FT /note="1 probable transmembrane helix predicted for DIP1097 FT by TMHMM2.0" FT CDS 1082013..1083971 FT /transl_table=11 FT /gene="ilvB" FT /locus_tag="DIP1098" FT /product="Acetolactate synthase large subunit" FT /EC_number="2.2.1.6" FT /note="Similar to Corynebacterium glutamicum acetolactate FT synthase large subunit IlvB SW:ILVB_CORGL (P42463) (626 aa) FT fasta scores: E(): 4.3e-181, 75.32% id in 620 aa, and to FT Mycobacterium tuberculosis acetolactate synthase IlvB or FT Rv3003c or MT3083 or MTV012.17c SW:ILVB_MYCTU (O53250) (618 FT aa) fasta scores: E(): 1.6e-152, 64.94% id in 599 aa" FT /protein_id="CAE49621.1" FT /translation="MLQHVSPRNYHKELDVVASSTQPNQPTPATLARRAQVLKPERMTG FT ADAIVRSLEELGIDMVFGLPGGAVLPLYDSLYASTKLRHVLVRHEQGAGHAATGYAQAT FT GKVGVCIATSGPGATNLVTPIADAHLDSVPLVAITGQVGRSLLGSDAFQEADIRGITMP FT VTKHNFMVTDVNMIPQAIAEAFYLAASGRPGPVLVDIPKDIQQAEIDFHWPPTIDLPGY FT RPVTTPHSRPVEQAAKMISQARRPVLYVGGGVIKANASQELQAFAEHTGIPVVTTLMAL FT GAFPGSHELNMGMPGMHGTVPAVGALQKSDLLITIGARFDDRVTGALASFAPGAKVIHA FT DIDPAEIGKIRAVDVPIVGDAQEVLTALLNVYKDLDLPQPRHERWLRYLNGLKSNYPRG FT WEKSDDGMIEPQAVIRALAKTVGTDAIYAAGVGQHQMWSAQFLDFEKPRTWLNSGGLGT FT MGYSVPAALGAKAGCPDKEVWAIDGDGCFQMTNQELATAAVEGMPIKVALINNGNLGMV FT RQWQTLFYDGNYSNTKLRNQGQYMPDFVMLAESLGCAAFRVTEETDIVPTIEKARAIND FT RPVVIDFIVGEDAQVWPMVAAGHSNSDIEYAHGLRPLFDGESSAAETPEDIDDVIDEAT FT LLALEAQKRHLEPKENI" FT misc_feature 1082133..1082651 FT /note="HMMPfam hit to PF02776, Thiamine pyrophosphate FT enzyme, N-terminal TPP binding domain" FT misc_feature 1082697..1083152 FT /note="HMMPfam hit to PF00205, Thiamine pyrophosphate FT enzyme, central domain" FT misc_feature 1083222..1083761 FT /note="HMMPfam hit to PF02775, Thiamine pyrophosphate FT enzyme, C-terminal TPP binding domain" FT misc_feature 1083411..1083470 FT /note="ScanRegExp hit to PS00187, Thiamine pyrophosphate FT enzymes signature." FT CDS 1083987..1084511 FT /transl_table=11 FT /gene="ilvH" FT /gene_synonym="ilvN" FT /gene_synonym="livS" FT /locus_tag="DIP1099" FT /product="Acetolactate synthase small subunit" FT /EC_number="2.2.1.6" FT /note="Similar to Mycobacterium tuberculosis acetolactate FT synthase small subunit IlvH or IlvN or Rv3002c or MT3082 or FT MTV012.16c SW:ILVH_MYCTU (O53249) (168 aa) fasta scores: FT E(): 1.3e-28, 54.77% id in 157 aa, and to Corynebacterium FT glutamicum (Brevibacterium flavum) acetohydroxy acid FT synthase, small subunit IlvN or LivS TR:Q57091 FT (EMBL:L09232) (172 aa) fasta scores: E(): 5.4e-47, 81.06% FT id in 169 aa" FT /protein_id="CAE49622.1" FT /translation="MQQQETFRHILSVLVQDVDGIISRVSAMFTRRSFSLVSFVSGKTE FT MHGINRITIVVDASTQDIEQITKQLNKLIPVLKVVRLDEDVTVARALMLVKVSADASNR FT PQVVDAAKIFRAHVVDVAPDSVVIEATGNKGKLRALLDVLEPFGIRELISSGQIALNRG FT SKTMAPQSSRS" FT misc_feature 1084011..1084232 FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 1084631..1085644 FT /transl_table=11 FT /gene="ilvC" FT /locus_tag="DIP1100" FT /product="Ketol-acid reductoisomerase" FT /EC_number="1.1.1.86" FT /note="Similar to Corynebacterium glutamicum ketol-acid FT reductoisomerase IlvC SW:ILVC_CORGL (Q57179) (338 aa) fasta FT scores: E(): 5.3e-95, 76.97% id in 330 aa, and to FT Mycobacterium tuberculosis ketol-acid reductoisomerase IlvC FT or Rv3001c or MT3081 or MTV012.15c SW:ILVC_MYCTU (O53248) FT (333 aa) fasta scores: E(): 3.8e-86, 67.26% id in 333 aa" FT /protein_id="CAE49623.1" FT /translation="MAIELLYDADADLSIIQGRKVAVIGYGSQGHAHAQCLRDSGVEVV FT IGLREGSKSSEKAQEAGFEVKSNADAAAWADVIMLLAPDTSQAEIFSHDIEPNLKDGDA FT LLFGHGLNIHFELIKPAVNITVGMVAPKGPGHLVRRQFVDGKGVPCLIAVAQDPKGEGK FT DLALSYAAAIGGARAGVIPTTFREETETDLFGEQVVLCGGLEHLMMKGFEVLAEAGYAP FT EMAYFEVLHEMKLIVDLIWEGGIENMNYSISETAELGGYVAGPRIITPEVKENMKAVLA FT DIQSGKFVRDMVADVEAGQPELKRYREEIAAHPIEATGSKLRDLMSWVKNPLDETA" FT misc_feature 1085183..1085620 FT /note="HMMPfam hit to PF01450, Acetohydroxy acid FT isomeroreductase, catalytic domain" FT misc_feature 1085363..1085449 FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT CDS 1085794..1086717 FT /transl_table=11 FT /locus_tag="DIP1101" FT /product="Cation-efflux system integral membrane protein" FT /note="Similar to Staphylococcus aureus (strain N315) CzrB FT protein or SA1948 or SAV2146 TR:BAB58308 (EMBL:AP003136) FT (325 aa) fasta scores: E(): 4e-37, 37.74% id in 302 aa, and FT to Alcaligenes eutrophus cobalt-zinc-cadmium resistance FT protein CzcD SW:CZCD_ALCEU (P13512) (316 aa) fasta scores: FT E(): 9.2e-36, 40.84% id in 284 aa" FT /protein_id="CAE49624.1" FT /translation="MSNHHHDHHNHHDHHHGAPSSSRALLLVAGLTFAFFIVELVGGAL FT AKSLALMSDALHMLSDSTGLIIALIAVVIGRRKATSQATYGYKRIEVLAALVNALSVTF FT ITGWIVLEAIRRLSSHTVIDTRTTMVIAIIGLVFNIVGAVVLHGHSHEGVNVKGAYLHI FT LVDLGGSVAVIVSSLLIMTTGWMWCDTAVSVLLAVIILPRSLSLVRSTLGILMERVPKT FT VDVETIRSRIAQIDGVGGVHDVHVWSIDGQQDIATVHVVVDENVNVKDCTTLDRIQKVF FT HDAGIDHVTVQLEHDTHMSHELPCQH" FT misc_feature 1085803..1085841 FT /note="ProfileScan hit to PS50316, Histidine-rich region." FT misc_feature order(1085863..1085931,1085959..1086018,1086067..1086135, FT 1086178..1086246,1086265..1086333,1086346..1086414) FT /note="6 probable transmembrane helices predicted for FT DIP1101 by TMHMM2.0" FT misc_feature 1085866..1086693 FT /note="HMMPfam hit to PF01545, Cation efflux family" FT CDS 1086770..1088578 FT /transl_table=11 FT /locus_tag="DIP1102" FT /product="Conserved hypothetical protein" FT /note="Similar to Anabaena sp All3615 protein TR:BAB75314 FT (EMBL:AP003593) (621 aa) fasta scores: E(): 1.8e-37, 29.29% FT id in 594 aa, and to Streptomyces coelicolor hypothetical FT 67.8 kDa protein SC4G2.12c TR:O86684 (EMBL:AL031371) (605 FT aa) fasta scores: E(): 9.5e-29, 34.55% id in 602 aa" FT /protein_id="CAE49625.1" FT /translation="MGFSTPSYDLIYLFNRIDRGDLQLPDFQREYRWDVDRIRALLVTV FT LRGYPMGSIMALDTRGEEMRFRPRPLFGAPDTGMAPGLLLLDGQQRLTTLYQCLTGDGL FT VESVDFRNKKIKRRFFVDIQKAVSAEVMPDEAVISVDQHGDVKSHFAKNDIPRLATEED FT MLRHQCMPVSSLLQNRGTDMLFDLAQNAEPDARERIKNFHNTVLKPVVRYSVPMVRLDR FT ETAQEGVGSIFAAANSSGLQMDVFELLTSLFAAQDPDFDFRADWHKTEEVLRQFPALDQ FT IGQTEFLTAVALYVTAVQGHASGHREDILKLSVADYQYAAPLIRAAFHEAAHYMRERCI FT MSIKQVPYSAQLIPLTVIIALLARDPKNMSHKDSWDRLNQWFWCGVFGELYGSPALAVR FT MGVDVDEVTRWIDDANNPSPSVEKPQSIRDARFVESRLLSACPESGLYKGIYALLMGRG FT ARDFRTGMAFDHTNFEQLGVHFRPVFPESWCEEHGINPVLSSSVLNRTPMGRRTHVMVE FT GASPARYLVRLQSKSLMDDAEFDQVLATHLADPHTLFAGQAEEFFSDRRSKFLTMIEEA FT MGTAAIRDVDEGDLTAGEEGPLAFEK" FT misc_feature 1087727..1087762 FT /note="ScanRegExp hit to PS00436, Peroxidases active site FT signature." FT CDS 1088634..1090115 FT /transl_table=11 FT /locus_tag="DIP1103" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49626.1" FT /translation="MGTSGCTVDTSRRDKVRMALPHAELEQARMDNLTRHVAQNFLREP FT QVVGEPNDSGVAVSQLLFEKSDTVVISDREIHHQLRAASIAVVAHAPMLLMDDTDRDAV FT QAEIGRLGARYILAIGDVGLPKTTGNVKVIPDSGSLTALGKLTSLQFRTQRIDVSNALS FT AVSRLDGTHPMWLLTNRQEKVQSSPSDGEVSAFPVQSRRDAGAAPQVIATQESGIAAVA FT TARSYGASVTVMRFPDPRLNVESMRAVAGLSDQPLIALGSQFGTSQQLSERIELGERAP FT LALPHKTGLVFALRTLRARYLNDSDVSEHVDIPYGANYVRTIAHPLSSQDQQDWKAWAD FT AINAQDGFVFIEIDAVHRDADEILDSVEEIVSQPSIGVILRNAAQVCARSPQSRQRIAD FT RLMHWNSEVINHNGDQLGVVLEGVDILRGGVCGISPQELMGLGLAILPARGEHLGGDAT FT VNSQLYWDDWFVAERESFQPTGTLRSPRLGLIIRD" FT CDS 1090278..1091873 FT /transl_table=11 FT /gene="serA" FT /locus_tag="DIP1104" FT /product="D-3-phosphoglycerate dehydrogenase" FT /EC_number="1.1.1.95" FT /note="Similar to Mycobacterium tuberculosis FT D-3-phosphoglycerate dehydrogenase SerA or Rv2996c or FT MT3074 or MTV012.10 SW:SERA_MYCTU (O53243) (528 aa) fasta FT scores: E(): 3.6e-129, 67.56% id in 521 aa, and to Homo FT sapiens D-3-phosphoglycerate dehydrogenase PhgDH FT SW:SERA_HUMAN (O43175) (533 aa) fasta scores: E(): 1.4e-43, FT 34.47% id in 438 aa" FT /protein_id="CAE49627.1" FT /translation="MSQNGRPVVLIADKLAQSTVDALGDAVEVRWVDGPNRAELLAAVP FT EADALLVRSATTVDEEVLNAATNLKIVGRAGVGLDNVDIATATDKGVMVANAPTSNIHS FT ACEHAISLLLSTARQIPAADKTLRVGEWKRSSFKGVEIFGKTVGIVGFGHIGQLFAQRL FT AAFEATIIAYDPYANPARAAQLGVELVDLESLMQRADFVTIHLPKTAETAGMFNAELLA FT KSKQGQIIINAARGGLVDEQALADAIDAGRIRGAGFDVFATEPCTDSPLFNRPEVVVTP FT HLGASTVEAQDRAGTDVAASVLKALAGEFVPDAVNVSGGRVGEEVALWLDLARKLGVVA FT GKLLDKAPVAVEVEARGELSTENIDVLGLSALRGVFSSFIEEPVTFVNAPRIAEERGVK FT LDVTTASESLTHRSVLEVCVIGADGSKESVIGALTGLNHVEKIVRINKRGLDLRAQGFN FT VYFQYTDTPGALGKVGTALGAQGFNIDAAALSQDSEGDGATLVLRVDKPIPDALVEEIA FT AGIGAEAFAVDFDA" FT misc_feature 1090293..1090574 FT /note="HMMPfam hit to PF00389, D-isomer specific FT 2-hydroxyacid dehydrogenase, catalytic domain" FT misc_feature 1090578..1091123 FT /note="HMMPfam hit to PF02826, D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD binding domain" FT misc_feature 1090692..1090715 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1090716..1090799 FT /note="ScanRegExp hit to PS00065, D-isomer specific FT 2-hydroxyacid dehydrogenases NAD-binding signature." FT misc_feature 1091493..1091540 FT /note="ScanRegExp hit to PS00589, PTS HPR component serine FT phosphorylation site signature." FT misc_feature 1091646..1091861 FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 1092016..1093035 FT /transl_table=11 FT /gene="leuB" FT /locus_tag="DIP1105" FT /product="3-isopropylmalate dehydrogenase" FT /EC_number="1.1.1.85" FT /note="Similar to Corynebacterium glutamicum FT 3-isopropylmalate dehydrogenase LeuB SW:LEU3_CORGL (P94631) FT (340 aa) fasta scores: E(): 7.6e-105, 83.77% id in 339 aa, FT and to Mycobacterium tuberculosis 3-isopropylmalate FT dehydrogenase LeuB or Rv2995c or MT3073 or MTV012.09 FT SW:LEU3_MYCTU (P95313) (336 aa) fasta scores: E(): 4.9e-84, FT 68.93% id in 338 aa" FT /protein_id="CAE49628.1" FT /translation="MKLAVIGGDGIGPEVTAEALKVLNAVRDDIEVTDYDLGARRYLRN FT GELLADADLVSLREHDAILLGAIGAPGEVPPGVLERGLLLKMRFALDHHVNLRPSKLYP FT TATSPLANPGDIDFVVVREGTEGLYCGNGGTLREGTPHEIASEVSQNTRYGVERVVRDA FT FERAQNRKKHLTLVHKTNVLVNAGGLWQRTVNEIATEYPEVTVDYNHIDAATIYMVTDP FT SRYDVIVTDNLFGDILTDLAGAVTGGIGLAASGNIDATGVNPSMFEPVHGSAPDIAGQG FT IADPTAAILSAAMLLRHVGDESNAQRIEAAVTYDVAERPAGPVKTVEVGDRIVAALQR" FT misc_feature 1092019..1093014 FT /note="HMMPfam hit to PF00180, Isocitrate/isopropylmalate FT dehydrogenase" FT misc_feature 1092709..1092768 FT /note="ScanRegExp hit to PS00470, Isocitrate and FT isopropylmalate dehydrogenases signature." FT CDS join(1093132..1093971,1093973..1094662) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1106" FT /product="Conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to Vibrio cholerae hypothetical FT protein VC1291 TR:Q9KSG5 (EMBL:AE004208) (637 aa) fasta FT scores: E(): 2.7e-26, 26.39% id in 485 aa, and to FT Rhodobacter capsulatus hypothetical 66.0 kDa protein FT TR:O68043 (EMBL:AF010496) (608 aa) fasta scores: E(): FT 1.9e-23, 27.38% id in 566 aa. Contains several in-frame FT stop codons and a frameshift at residue 279" FT misc_feature 1093162..1093389 FT /note="ProfileScan hit to PS50042, cAMP/cGMP binding FT motif." FT misc_feature 1093507..1093665 FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature 1093705..1093863 FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature 1093714..1093860 FT /note="ProfileScan hit to PS50147, SNF4 repeat." FT misc_feature 1093714..1093863 FT /note="HMMSmart hit to SM00116, Domain in cystathionine FT beta-synthase and other proteins." FT CDS 1094680..1094859 FT /transl_table=11 FT /locus_tag="DIP1110" FT /product="Conserved hypothetical protein" FT /note="Some similarity to Vibrio cholerae DNA polymerase FT III, epsilon subunit, putative VC1290 TR:Q9KSG6 FT (EMBL:AE004208) (236 aa) fasta scores: E(): 0.37, 38.33% id FT in 60 aa" FT /protein_id="CAE49630.1" FT /translation="METTSLDPRNGSIVAIGWVPVENGVIMVVSACYQLVYDVQAQESV FT GDSGTPHTMQRVMR" FT CDS 1094905..1095237 FT /transl_table=11 FT /locus_tag="DIP1111" FT /product="Putative integral membrane protein" FT /note="no significant database matches" FT /protein_id="CAE49631.1" FT /translation="MDKLFRVVLFGAGLYYLCTAVWWWISGRNVVISWLYIGAVAILVA FT GAWLTRRYQKKMVAQFGEFGELSEQQRDTIRELKAGGRVVEAVRKTRVWYPSLGLVEAK FT KLVDEL" FT misc_feature order(1094923..1094982,1094992..1095051) FT /note="2 probable transmembrane helices predicted for FT DIP1111 by TMHMM2.0" FT CDS 1095311..1096108 FT /transl_table=11 FT /locus_tag="DIP1112" FT /product="Putative hydrolase, FAA-family" FT /note="Similar to Mycobacterium tuberculosis possible FT 2-hydroxyhepta-2,4-diene- 1,7-dioate isomerase Rv2993c or FT MTV012.07c TR:O53242 (EMBL:AL021287) (239 aa) fasta scores: FT E(): 2.5e-42, 48.73% id in 238 aa" FT /protein_id="CAE49632.1" FT /translation="MRFGRIATPDGMCFCVVEGDDAQAICKEIEGTPFTEPKYTGRQWK FT LDEVRLLAPMLPSKIVAIGRNYADHVKEVFQKSAEHLPPTLFLKPPTAVVGPGAAIRIP FT EFATKVEFEGELAMVIAKPCKNVKKEDWKSVVLGFTIINDVSSRDLQFADGQWARAKGI FT DTFAPLGPWIETDIDSIETDNLPIKAHLTHDGITETKQDSNSNQMIMDLGEIIEFITAS FT FTLLPGDVICTGSPAGTAAMVPGDFIEIEIPGIGRLGNPVAKA" FT misc_feature 1095545..1096042 FT /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) FT hydrolase family" FT CDS 1096131..1096775 FT /transl_table=11 FT /locus_tag="DIP1113" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative FT methyltransferase SCF43A.25c TR:Q9XA90 (EMBL:AL096837) (215 FT aa) fasta scores: E(): 2.2e-12, 36.23% id in 207 aa" FT /protein_id="CAE49633.1" FT /translation="MSTTHNSLPASSDKHHDGHGEASLYHDSHGHAWSGNPNYTLTQLI FT PELRINLGSSLDIGSGEGADAAWLASLGWKAVGLEPSGVAVERSRELSSNATFIQGKVP FT QDLDRCGGPFDLVTGFYIPIAGEDAWRAIARQVADGGYLIYVHHNLDELRAKGHPLLGR FT DDLLMPFDAADLAPSGAWEIVVHETRHREIVGGHGHHHHLDDVLVLKRRKK" FT CDS complement(1096756..1097889) FT /transl_table=11 FT /locus_tag="DIP1114" FT /product="Putative isochorismate synthase" FT /note="Similar to Bacillus subtilis isochorismate synthase FT DhbC SW:DHBC_BACSU (P45744) (398 aa) fasta scores: E(): FT 1.9e-43, 41.01% id in 356 aa, and to Stigmatella aurantiaca FT MxcD TR:Q9F639 (EMBL:AF299336) (408 aa) fasta scores: E(): FT 7e-40, 36.91% id in 382 aa, and to Vibrio cholerae FT vibriobactin-specific isochorismate synthase VibC or VC0773 FT SW:VIBC_VIBCH (O07898) (395 aa) fasta scores: E(): 2.8e-31, FT 35.45% id in 330 aa" FT /protein_id="CAE49634.1" FT /translation="MCAHRPATAPDFLLSRSHGSIRTQGAVETFSDPGKAVEALRSGRV FT ELVVGALAFRRDHACALTVPRSVIREEGPLEPHAYYRQGPGSIVNAQVEKLVPSLDKHH FT ARVEAAINTIKSTSLKKVVLARAVDMTFSPAVDPRLIAARLIDLSRNRDGFIADLTPAG FT EDFAGAMLVGSSPEVLIKKQGSTVTAYPLAGSAPRSADAVTDATNAELLRRSHKDLQEH FT SYVVEHLRNVLEPLCSKLSIPANPELTKTNEMWHLATPVVGTLKDASLTALELAMRTHP FT TPAICGTPTDAAEELISIAEGDRRFYAGTVGWADNHGDGEFMVSIRCAEVSSDGTSARA FT WAGGGIVAESDAAAEVEETTAKLRTIMKALGITSFDA" FT misc_feature complement(1096780..1097379) FT /note="HMMPfam hit to PF00425, chorismate binding enzyme" FT misc_feature complement(1096780..1097535) FT /note="BlastProDom hit to PD000779, PD000779" FT CDS 1097919..1099412 FT /transl_table=11 FT /gene="gltX" FT /gene_synonym="gltS" FT /locus_tag="DIP1115" FT /product="glutamyl-tRNA synthetase" FT /EC_number="6.1.1.17" FT /note="Similar to Mycobacterium tuberculosis glutamyl-tRNA FT synthetase GltX or GltS or Rv2992c or MT3070 or MTV012.06c FT SW:SYE_MYCTU (O53241) (490 aa) fasta scores: E(): 7.3e-122, FT 63.87% id in 490 aa, and to Bacillus subtilis glutamyl-tRNA FT synthetase GltX SW:SYE_BACSU (P22250) (483 aa) fasta FT scores: E(): 1e-62, 38.55% id in 485 aa" FT /protein_id="CAE49635.1" FT /translation="MNIMSDVRVRFCPSPTGTPHVGMVRTALFNWAHARHTGGKLIFRI FT EDTDAARDSEESYQAIIDSLKWLGMDWDEGVIVGGPHEPYRQSQRMDIYKDVLEKLKEA FT GFVYPAYSTAQEVEERHKAAGRDPKLGYDNYDRTLTDEQIAAFEAEGRQPVWRLRMPER FT DWKWNDLVRGEIEFKSSTQPDYVVARSNGAPLYTLVNPVDDALMGITHVLRGEDLLPST FT PRQLALYEALKVIGVAQQTPEFGHLPFVMGEGNKKLSKRDPQSNLFNHRDAGIIPEGML FT NYLALLGWSLAGEKDIFSVDELVENFDVTNVLANPARFDQKKLEAINADHIRLLEPKDF FT EQRLRAYLTEYTDFPTDYPAEKFAIAAELVQTRIKMLGDAYGLLSFLAIADEDLTLDEK FT SAKKNLKETAIPALDAGIAALEGVEEWTTPAIEAALHKALIEDLDLKPRVAFGALRVGI FT SGQAVSPPLFESMELLGKESTLTRLRATREVTPYQVAAE" FT misc_feature 1097934..1099379 FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q)" FT misc_feature 1097946..1097984 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 1097988..1098023 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 1098033..1098074 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 1098498..1098530 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT misc_feature 1098546..1098572 FT /note="FPrintScan hit to PR00987, Glutamyl-tRNA synthetase FT signature" FT CDS 1099572..1100606 FT /transl_table=11 FT /locus_tag="DIP1116" FT /product="Putative exported esterase/hydrolase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT esterase, putative MT3397 TR:AAK47740 (EMBL:AE007148) (304 FT aa) fasta scores: E(): 5.3e-09, 30.57% id in 242 aa, and to FT Piromyces equi cinnamoyl ester hydrolase EstA TR:Q9Y871 FT (EMBL:AF164516) (536 aa) fasta scores: E(): 1.2e-06, 25.19% FT id in 258 aa, and to Pseudomonas fluorescens esterase D FT XynD TR:Q51815 (EMBL:X58956) (583 aa) fasta scores: E(): FT 5.8e-06, 27.37% id in 274 aa" FT /protein_id="CAE49636.1" FT /translation="MFDATRAAFLGVAVFISVLLVASFFSPTPGRAVEPAPAGAPAQEG FT SLPHDGLGSIKPIHDVDLGGVEQPPLPAPVDPDPSFNPQPPFAPGELREGFVDVGNGNI FT RRYLIHVGTNYQPHAPELTPVVFGFGGWKDTPEKFADYSRFGLTDFGANAMIIYPEGIA FT RAWEGAPYAATRVGDDVHFVRTILNAVDADYRIDRSRVYAVGMSNGGGMAASLACHAPD FT LVAGVVSVSAAYYEPVVADCAPGAVATLDIHGTHDEVIAYQGGMRHGAPFLGAEQVVAG FT VAARNGCGPALPPRWIEGPAEHYGFAGCAAPVEHVRVLGQKHVWNGVPHATTLAWEFLH FT HQHK" FT misc_feature 1099572..1099697 FT /note="Signal peptide predicted for DIP1116 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.530 between residues 42 and 43" FT misc_feature 1099941..1100237 FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT tRNA 1100709..1100780 FT /gene="tRNA-Gln" FT /product="transfer RNA-Gln" FT /anticodon=(pos:1100742..1100744,aa:Gln) FT /note="tRNA Gln anticodon CTG, Cove score 49.89" FT tRNA 1100814..1100886 FT /gene="tRNA-Glu" FT /product="transfer RNA-Glu" FT /anticodon=(pos:1100848..1100850,aa:Glu) FT /note="tRNA Glu anticodon CTC, Cove score 60.15" FT CDS complement(1100963..1101508) FT /transl_table=11 FT /locus_tag="DIP1117" FT /product="Putative TetR-family transcriptional regulator" FT /note="Similar to Streptomyces coelicolor SC10A5.11 protein FT TR:O54102 (EMBL:AL021529) (198 aa) fasta scores: E(): FT 8.8e-14, 32.94% id in 170 aa, and to Streptomyces FT roseosporus WhiR protein TR:P72569 (EMBL:U58281) (179 aa) FT fasta scores: E(): 1.5e-05, 24.5% id in 151 aa" FT /protein_id="CAE49637.1" FT /translation="MSQPESPEQRRTAILATAERILRSGSPLTLGKVAQEVGISRTALY FT RYVSGIDEIIETLATKDFPHWLTSLRSAMAAAPTPKQRALCWAIESIKLGRETDHAWLA FT TLSSLNLSENCRNAIASEHSKIDQLLRVELAQLGTPHIELTVATVRAVVMTAIQTPSST FT EADDYFTATISAIIDASC" FT misc_feature complement(1101335..1101469) FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT misc_feature complement(1101362..1101427) FT /note="Predicted helix-turn-helix motif with score 1984 FT (+5.94 SD) at aa 28-49, sequence LTLGKVAQEVGISRTALYRYVS" FT CDS 1101650..1103803 FT /transl_table=11 FT /locus_tag="DIP1118" FT /product="Integral membrane protein, MmpL family" FT /note="Similar to Streptomyces coelicolor putative membrane FT protein SC10A5.10c SW:MMLB_STRCO (O54101) (847 aa) fasta FT scores: E(): 5.3e-106, 47.61% id in 733 aa, and to FT Mycobacterium tuberculosis putative membrane protein MmpL8 FT or Rv3823c or MT3931 or MTCY409.07 SW:MML8_MYCTU (O07800) FT (1089 aa) fasta scores: E(): 1.1e-21, 27.76% id in 461 aa" FT /protein_id="CAE49638.1" FT /translation="MFEVLYGSRKRALFTVIGWIIMIGVFAALAPTIDDVLTKGNNNAG FT ADAASTQAAQLIEMNFPDADAVPAILTVRGGDANVSKVLAAVDSVRENVDRFGPSISAA FT CKRPSPTCVPASTTEMTSGDTNLVVIPVTGDPTTTEYRDDIKTLRAELAHAFGVEDLTP FT DAAPVHVTGPVGIVTDTVNVFAGGDKILLLATMLLVLVILLAVYRAPLMALLPLFAVGM FT AMRLAQTGGALLADAGIINISSQTASIMTVLLFGVGTDYALIINARWREHLRDTNDPAR FT AMIVAMGHVLPVLLSSAGTIVAAMLALLTTTSPTLQGFGPYLAIGVVSAMIAALTLLPA FT LMVLAGRVALWPNKPELGHDSKIWTKVADLVTTKPKAILAGTAALMVVLALGLLNYSVS FT YNLMSGFRIATDSAAGQKVIAQDFGEGEIAPSTMIVTGPGADAAAKAIAEQLPQQLPGD FT VTRAAFSPRKDVTEDGSAARVDVVLNADPYSTTAFDMLDRATEQAGEIAGSEVRVASAG FT ETATARDSAAEVTHDFTLLVPLIFLVIALILGLLLRSWLAPIYLIATLGLSFAATLGLV FT AFITLTVQGDTGFGSYVPVYVLVFLTALGVDYTIFVMARLREEMRDKTMAEAMRRAIIA FT TGGVVSSAGLILAATFAVLMTQPIRELYQFGMAMMLGILIDTFIIRPLMVPAIVTLLGD FT RALLPAKPRQESCEASIEPVPAS" FT misc_feature 1101650..1101730 FT /note="Signal peptide predicted for DIP1118 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.312 between residues 27 and 28" FT misc_feature order(1101683..1101751,1102217..1102270,1102289..1102357, FT 1102385..1102444,1102502..1102570,1102613..1102681, FT 1102778..1102846,1103246..1103305,1103324..1103392, FT 1103420..1103488,1103546..1103614,1103657..1103725) FT /note="12 probable transmembrane helices predicted for FT DIP1118 by TMHMM2.0" FT misc_feature 1102367..1102681 FT /note="ProfileScan hit to PS50156, Sterol-sensing domain FT (SSD) profile." FT misc_feature 1103333..1103719 FT /note="ProfileScan hit to PS50156, Sterol-sensing domain FT (SSD) profile." FT CDS 1103979..1105439 FT /transl_table=11 FT /locus_tag="DIP1119" FT /product="Conserved hypothetical exported protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0099 TR:Q9CDB3 (EMBL:AL583917) (336 aa) fasta scores: FT E(): 7e-07, 27.58% id in 261 aa, and to Mycobacterium FT tuberculosis hypothetical 35.4 kDa protein Rv3802c or FT MTV026.07c TR:O53581 (EMBL:AL022076) (336 aa) fasta scores: FT E(): 4.2e-06, 27.98% id in 243 aa" FT /protein_id="CAE49639.1" FT /translation="MSRAALGIRSSWVGFVAAATTAMASTIAPVAYAQVAHHVPNDGCS FT AVEVAVVGGTTQANIHDDPHDVYSFGKGTNFAVNMTRRFHNVTAWQLPYYSSAGITASN FT NDAEQKEFPPYAVSKNRGVDVLDAHLSDQAVKCPDTQFVIAGFSQGADIAGDMAERISR FT GKTNPALTPERVLGVYLLADPGRSDLPMNPTQGQTTTGKSGPLTDNGAVLIETNLGLPG FT AGSVGIAGPRAAGAFSNLPGKVRSICSSGDPACAVHPKGLLASVGKWANDQNDFEHVPV FT ESVRTMMLNGSFFISLAPHMNKIRGDLYASDPVALKQHFDDASMHPRLTQPERNTLHLV FT GAEIAGLMGHLKQGRDQVAVGSSDTGLSSGGPRDRLIALEKIVQQQTGLVELQLAVGLM FT IVHLSYTGDSREVSTVGAQRADDWIDSDMTQLISGYLNTLSVRAPYVTLGERHTFIQKM FT GWPIWWIVSSIWGQRNHAARGVWEFFGL" FT misc_feature 1103979..1104077 FT /note="Signal peptide predicted for DIP1119 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.969 between residues 33 and 34" FT misc_feature 1104564..1104587 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 1105526..1105807 FT /transl_table=11 FT /locus_tag="DIP1120" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49640.1" FT /translation="MIGSLEQSPLSNGKHSFSSELTGTVTLVSVLSIKRKGGCVAGIEQ FT PEHHGYRVGESSAGTAMIRDSKRQGCANPKLKNNIFSVTSHSCAGMLN" FT CDS 1105862..1105996 FT /transl_table=11 FT /locus_tag="DIP1121" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No significant database matches" FT /protein_id="CAE49641.1" FT /translation="MLAYETSAQRRELTRSYSDAFLVAHDVDVRDREETFIGHGELTA" FT tRNA 1106131..1106203 FT /gene="tRNA-Glu" FT /product="transfer RNA-Glu" FT /anticodon=(pos:1106165..1106167,aa:Glu) FT /note="tRNA Glu anticodon CTC, Cove score 60.15" FT CDS 1106381..1109089 FT /transl_table=11 FT /gene="ppc" FT /locus_tag="DIP1122" FT /product="phosphoenolpyruvate carboxylase" FT /EC_number="4.1.1.31" FT /note="Similar to Corynebacterium glutamicum FT phosphoenolpyruvate carboxylase Ppc SW:CAPP_CORGL (P12880) FT (918 aa) fasta scores: E(): 8.5e-165, 55.98% id in 927 aa, FT and to Mycobacterium leprae phosphoenolpyruvate carboxylase FT Ppc or ML0578 or B1496_C3_207 SW:CAPP_MYCLE (P46710) (934 FT aa) fasta scores: E(): 1.1e-133, 48.59% id in 924 aa" FT /protein_id="CAE49642.1" FT /translation="MTAAISDRVREDIRLLGRVLGRVIAQQEGEEVYELVEATRRMAFD FT VSHGDADPEDLMVIFRDLDITKTNLVARAFSYFALLANLVEDLDDESVEADVSLRKTFA FT KLKREGVSAADAASVIRSAEVAPVLTAHPTETRRRTVFDTQTRIKQLLKDAHHGGDMQV FT IEQEMYLRMTLLWQTALIRIARPTLEDEIDVGLRYYKKSLLEQVPALNRSIRHSMRETF FT GLQLPDIAVMRPGSWIGGDHDGNPYVNARTLTYATRQAAKTVARYYVEQLGELERELSL FT SDRYSSCSKELLALAEASGNNWESRVDEPYRRAVYGMRARMKSNVDALERPEKTAGKKS FT SKRTPYATPEEFLRDLDVIDRSLRAHNDDVIADDRLARIRSAVTTFGFHLYTLDIRQNS FT ESFEAVIEEVFAAARRVPGGKRYSELAEAEKVELLIQELQTPRPLLFPGALEVEDAFSA FT DTTKELGIFLAAAQAVRDFGSRSIAHCIISMTATVSDILEPMVLLKEVGLRDVDVVPLF FT ETIDDLRCGAAILRELWSHPFYREHLRARGDIQEVMLGYSDSNKDGGYLQANWALYDAE FT LGLVELCREHNIELRLAHGRGGAVGRGGGPTYDAILAQPKGAVSGSVRITEQGEVISAK FT YGAPETARRHLEAFVSGALEASLLDTEPIADPDRAYAIMRDLAGFSGQRYQELVGDPGF FT IEYFTQSTPLHEIGELNLGSRPAARKQTTAISDLRAIPWVLSWSQSRTNIPGWFGVGSA FT VSRFVSAVPEKDRESRWQELRDLYATWPFFRSVMSNMAQVMAKAEISLARLYADLVDDP FT EVADRIYALIAEEFELTRRAYLAITGNEALVSENQRQARSLKRRYPYLLPLNAIQLELL FT RRYRGGDDQFLVSKTIQVTMNGLATALRNAG" FT misc_feature 1106759..1106800 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 1106762..1106797 FT /note="ScanRegExp hit to PS00781, Phosphoenolpyruvate FT carboxylase active site 1." FT misc_feature 1106906..1106956 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 1107080..1107127 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 1107428..1109005 FT /note="HMMPfam hit to PF00311, Phosphoenolpyruvate FT carboxylase" FT misc_feature 1107536..1107598 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 1108028..1108090 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 1108034..1108072 FT /note="ScanRegExp hit to PS00393, Phosphoenolpyruvate FT carboxylase active site 2." FT misc_feature 1108154..1108243 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT misc_feature 1108553..1108633 FT /note="FPrintScan hit to PR00150, Phosphoenolpyruvate FT carboxylase signature" FT CDS complement(1109099..1109488) FT /transl_table=11 FT /locus_tag="DIP1123" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces verticillus PhnA-like FT protein TR:Q9FB32 (EMBL:AF210249) (117 aa) fasta scores: FT E(): 3.3e-20, 56.19% id in 121 aa, and to Escherichia coli FT PhnA protein or B4108 or Z5710 or ECS5090 SW:PHNA_ECOLI FT (P16680) (111 aa) fasta scores: E(): 7.1e-17, 51.28% id in FT 117 aa" FT /protein_id="CAE49643.1" FT /translation="MTDTQAQGLDTLPPCPECESEYTYEMPPLIVCPECAHEFSTDTAT FT ADPEETSTVIVDSVGNVLSDGDTVSITKTIKVKGAQQPLKSGMKARNIRLKPEVGTGPE FT DHNIECKIDGFGQMILKPAVVKKIV" FT CDS complement(1109532..1110524) FT /transl_table=11 FT /locus_tag="DIP1124" FT /product="transferase, biotin synthase family" FT /note="Similar to Bacillus subtilis biotin synthase BioB FT SW:BIOB_BACSU (P53557) (335 aa) fasta scores: E(): 1.4e-38, FT 38.19% id in 322 aa, and to Corynebacterium glutamicum FT biotin synthase BioB SW:BIOB_CORGL (P46396) (334 aa) fasta FT scores: E(): 3.1e-31, 35.78% id in 299 aa" FT /protein_id="CAE49644.1" FT /translation="MTATLNTVQDLEASVLAGTAITRDEALSLIDAPLDELSAAADRIR FT AQMCGDGFDMCSIINAKSGRCPENCTFCAQSIRYPTISVDSYPLITADELVRQAQENKD FT KGVIRFSIVTSGRKLRRDEVRHICEGVRRIKQEVGIEVCISAGLLSAEDFQALHDAGIS FT RVHCNLETSRAYFPSICISHTFDDKIATLQAARDEGMSLCSGGILGLGESMEDRIDMAL FT SARELGVNSFPVNVLVAIEGTPLAGTEQLRPEEVQRCVAIFRFILPQAAIRLAGGRELL FT GDDGKACFQSGANSAISGDMLTTTGTTIASDMALVKDLGYTVTLDHSHS" FT misc_feature complement(1109559..1110470) FT /note="HMMPfam hit to PF01792, Biotin synthase" FT CDS 1110605..1111162 FT /transl_table=11 FT /locus_tag="DIP1125" FT /product="Conserved hypothetical protein" FT /note="Similar to Synechocystis sp. hypothetical 21.9 kDa FT protein SLL1660 SWALL:P72810 (EMBL:D90901) (194 aa) fasta FT scores: E(): 2.9e-16, 33.13% id in 166 aa, and to FT Pseudomonas denitrificans hypothetical 19.2 kDa protein in FT cobO 3'region SWALL:YCB8_PSEDE (SWALL:P29941) (175 aa) FT fasta scores: E(): 6.6e-07, 34.24% id in 146 aa" FT /protein_id="CAE49645.1" FT /translation="MISPRLAHAISIAAYAHRNQIRKATSIPYICHPYSVMVIAQSCTC FT DEDVFIAALLHDVLEDAAEEYSEHEMLNDFGPRVVSIVKEVTKDSSLSMWQERADSYLT FT HLETASHEALIVCLADKTHNLMSMVADYEAVGDALWARFNAGKDRQLWWYSSVWDVLER FT RLGKDFPGVADYARLLSMFAKA" FT misc_feature 1110677..1111006 FT /note="HMMSmart hit to SM00471, Metal dependent FT phosphohydrolases with conserved 'HD' motif." FT CDS complement(1111173..1111898) FT /transl_table=11 FT /locus_tag="DIP1126" FT /product="Putative IclR-family transcriptional regulator" FT /note="Similar to Mycobacterium tuberculosis probable FT transcriptional regulator Rv2989 or MT3067 or MTV012.03 FT SWALL:AAK47396 (EMBL:AL021287) (267 aa) fasta scores: E(): FT 8.6e-39, 48.26% id in 230 aa, and to Streptomyces FT coelicolor putative transcriptional regulator SC1C2.33c FT SWALL:O86533 (EMBL:AL031124) (238 aa) fasta scores: E(): FT 7.2e-31, 42.24% id in 232 aa" FT /protein_id="CAE49646.1" FT /translation="MGKINTDPAATSGIKVLDRAVSIMLAVAERPLSLTELCDVTNLPR FT ATAHRLATALETHNILTRTSDGKWTIGAVLSSLGAGSSTKLIDVATPIMTSLMNETGES FT VQLYQLAGATRVCIAAQEPTIGLQNTVPVGTRLPLTAGSAAKVFLAYSSPTLRDAMLAS FT GAQFTPEDLEEARDRGWSESISEREVGLASISAPVFDSEGLFIAVLSISGPTERLRPSP FT STLWSQQLTEAAAHLSQSL" FT misc_feature complement(1111179..1111694) FT /note="HMMPfam hit to PF01614, Bacterial transcriptional FT regulator" FT misc_feature complement(1111197..1111643) FT /note="BlastProDom hit to PD002768, PD002768" FT misc_feature complement(1111299..1111364) FT /note="ScanRegExp hit to PS01051, Bacterial regulatory FT proteins, iclR family signature." FT misc_feature complement(1111602..1111859) FT /note="HMMSmart hit to SM00346, helix_turn_helix isocitrate FT lyase regulation" FT CDS 1111988..1113430 FT /transl_table=11 FT /gene="leuC" FT /locus_tag="DIP1127" FT /product="3-isopropylmalate dehydratase large subunit" FT /EC_number="4.2.1.33" FT /note="Similar to Mycobacterium tuberculosis FT 3-isopropylmalate dehydratase large subunit LeuC or Rv2988c FT or MT3066 or MTV012.02c SWALL:LEU2_MYCTU (SWALL:O53237) FT (473 aa) fasta scores: E(): 2.3e-137, 72% id in 468 aa, and FT to Escherichia coli 3-isopropylmalate dehydratase large FT subunit LeuC or B0072 SWALL:LEU2_ECOLI (SWALL:P30127) (465 FT aa) fasta scores: E(): 2e-111, 61.68% id in 462 aa" FT /protein_id="CAE49647.1" FT /translation="MTSPMTSKDSKLTLAEKVWRDHVVSQGEGDQPDLIFIDLQLLHEV FT TSPQAFDGLRMAGRTLRHPELHLATEDHNVPTEGIHNGSLLEINDLVSRTQVETLRKNC FT EEFGVRLHAMGDKKQGIVHQVGPQLGATQPGMTIVCGDSHTSTHGAFGAMAFGIGTSEV FT EHVMATQTLSLKPFKTMAINVTGELQPGVTAKDLILAVIATIGTGGGQGHVIEYRGEAI FT EKLSMEARMTVCNMSIEAGARAGMIAPDETTFDYIKGREMAPTGQDWDDAVAYWKTLPT FT DEGAEFDTEITIDGSAITPFITWGTNPGQGLPLSSVVPSPEDFPGDNEKVAAEKALAYM FT GLTPGTPLRDIAIDTVFLGSCTNARMDDLRIAADILRGRSIADSVRMMVVPSSTMIKEQ FT AEAEGLDKIFIEAGAQWRTAGCSMCLGMNPDQLTPGERCASTSNRNFEGRQGPGGRTHL FT VSPAVAAATAIKGTLASPADLD" FT misc_feature 1112024..1113400 FT /note="BlastProDom hit to PD000511, PD000511" FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase)" FT misc_feature 1112273..1112314 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1112351..1112377 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1112384..1112425 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1112426..1112473 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1112612..1112653 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1112654..1112695 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1112885..1112929 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1113044..1113094 FT /note="ScanRegExp hit to PS00450, Aconitase family FT signature 1." FT misc_feature 1113056..1113091 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1113224..1113265 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT /note="ScanRegExp hit to PS01244, Aconitase family FT signature 2." FT CDS 1113442..1114032 FT /transl_table=11 FT /gene="leuD" FT /locus_tag="DIP1128" FT /product="3-isopropylmalate dehydratase small subunit" FT /EC_number="4.2.1.33" FT /note="Similar to Mycobacterium leprae 3-isopropylmalate FT dehydratase small subunit LeuD or ML1684 or MLCB637.33 FT SWALL:LEUD_MYCLE (SWALL:O33124) (198 aa) fasta scores: E(): FT 5e-53, 67.69% id in 195 aa, and to Escherichia coli FT 3-isopropylmalate dehydratase small subunit LeuD or B0071 FT SWALL:LEUD_ECOLI (SWALL:P30126) (201 aa) fasta scores: E(): FT 1.4e-31, 46.7% id in 197 aa" FT /protein_id="CAE49648.1" FT /translation="MEKFTTHTGVGVPLTRSNVDTDQIIPAVYLKRVTRTGFEDGLFNN FT WRTKDPNFVLNNEAYRNGSVLVAGPDFGTGSSREHAVWALKDYGFAVVLSSRFADIFRG FT NAGKAGLLAAQMEQTDIELLWKQLEQTPGAQVTVSLEERTVTCEGNVYPFFVDDYTRWR FT LMEGLDDVGLTLRKEAEIAAFEARRPSFKPVTQ" FT misc_feature 1113442..1113930 FT /note="HMMPfam hit to PF00694, Aconitase C-terminal domain" FT CDS complement(1114111..1115121) FT /transl_table=11 FT /locus_tag="DIP1129" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML1682 SWALL:Q9CBR8 (EMBL:AL583923) (311 aa) fasta scores: FT E(): 1.4e-40, 42.66% id in 300 aa, and N-terminal region to FT Streptomyces coelicolor putative MutT-like protein FT SCD84.10c SWALL:Q9KZV8 (EMBL:AL353816) (142 aa) fasta FT scores: E(): 4.4e-13, 42.4% id in 125 aa" FT /protein_id="CAE49649.1" FT /translation="MTSSNKLHEVDKDQQSAFDITGRYQTISAHPTKEFSKPTLAAGAV FT LWRHSSTITENPAVEFAVIHRPHYDDWSLAKGKVDPGESLPVTAEREIREETGHHVHLG FT KLLGKVSYPVGERTKVVYYWIAQVHDEAFEENNEVDELRWLPYTEARELLSYDVDRLVL FT DKAYKRLALPTTTRVILVRHAKAHQRHNWAGNDSIRPLEKKGQRQADLLGPMLAAYGPT FT SIHSATPARCQQTAAPLSELTGLEVVVDDRFDDEAWLSRMTVAQKACEELIATPGTHVV FT VSQGLFIPDAIAWLSAQGRLPLETIEAKKASAWVLSFHEGELTGADYLVSPLGVK" FT misc_feature complement(1114615..1115010) FT /note="HMMPfam hit to PF00293, MutT-like domain" FT misc_feature complement(1114819..1114866) FT /note="FPrintScan hit to PR00502, NUDIX hydrolase family FT signature" FT misc_feature complement(1114828..1114893) FT /note="ScanRegExp hit to PS00893, Nudix hydrolase FT signature." FT misc_feature complement(1114864..1114908) FT /note="FPrintScan hit to PR00502, NUDIX hydrolase family FT signature" FT CDS 1115316..1116311 FT /transl_table=11 FT /gene="gpsA" FT /gene_synonym="gpdA2" FT /locus_tag="DIP1130" FT /product="glycerol-3-phosphate dehydrogenase" FT /EC_number="1.1.1.94" FT /note="Similar to Mycobacterium tuberculosis FT glycerol-3-phosphate dehydrogenase GpsA or GpdA2 or Rv2982c FT or MT3060 or MTCY349.05 SWALL:GPDA_MYCTU (SWALL:P95113) FT (334 aa) fasta scores: E(): 8.7e-69, 59.27% id in 329 aa, FT and to Bacillus subtilis glycerol-3-phosphate dehydrogenase FT GpsA or GlyC SWALL:GPDA_BACSU (SWALL:P46919) (345 aa) fasta FT scores: E(): 2.1e-43, 40.78% id in 331 aa" FT /protein_id="CAE49650.1" FT /translation="MKIGVMGAGSWGTTLAKVFSDAGCDVTLWARREEVAREINTEHTN FT STYLRGIALPHTLTATTQPTQALCDADVVVLAVPSQTLRGNLAEWCADIPQDALLLSLA FT KGIEKETFLRMSEVIAEVTGAQPDKVAVLSGPNLAREIAEEQPAATVIACTNEKNAQRI FT QHALAAPYFRPYTNTDVIGCEIGGACKNVIALACGMASGRGLGENTLATLMTRGLAEIS FT RLGVAMGADPRTLSGLAGLGDLVATCSSPLSRNRTFGARLGEGKTLDEARAATNGQVAE FT GVISSQSIARLADSLGVDMPITRAVFGVCHRDQNVADMVAALMGRTKKSE" FT misc_feature 1115316..1116284 FT /note="HMMPfam hit to PF01210, NAD-dependent FT glycerol-3-phosphate dehydrogenase" FT misc_feature 1115322..1116275 FT /note="BlastProDom hit to PD001649, PD001649" FT misc_feature 1115328..1115381 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 1115478..1115561 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 1115709..1115771 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 1115829..1115903 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 1115904..1115978 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 1116024..1116077 FT /note="FPrintScan hit to PR00077, NAD-dependent FT glycerol-3-phosphate dehydrogenase signature" FT misc_feature 1116093..1116116 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 1116334..1117431 FT /transl_table=11 FT /gene="ddl" FT /locus_tag="DIP1131" FT /product="D-alanine--d-alanine ligase" FT /EC_number="6.3.2.4" FT /note="Similar to Mycobacterium smegmatis FT D-alanine--d-alanine ligase Ddl SWALL:DDL_MYCSM FT (SWALL:Q9ZGN0) (373 aa) fasta scores: E(): 1.7e-75, 55.98% FT id in 359 aa, and to Escherichia coli D-alanine--d-alanine FT ligase A DdlA or B0381 or Z0477 or ECS0431 SWALL:DDLA_ECOLI FT (SWALL:P23844) (364 aa) fasta scores: E(): 6e-43, 38.71% id FT in 359 aa" FT /protein_id="CAE49651.1" FT /translation="MSQNLSAQNSSETPRIKVAIIYGGRSSEHSVSCVSAGAIMAHLDP FT QRYEVFPVGITHDGVWTVGESDPSRLKTVDRVMPEVQFTREVSLSVNPTTAGELCFEDG FT SLYAKVDVVFPVLHGRFGEDGTIQGLFELSGVPYVGTGVLSSACGMDKEFTKKLMAAEG FT LPVGKEVILRGSETLTEEHKRELGLPVFVKPARGGSSIGISRVADWSEWDAALSLAREH FT DSKVIVEAEIVGVEVECGVLERIDGSLMASVPAQLQDTDEGDEGFYGFDTKYLDDVVTA FT HIPAPFDAETTALIQELSLKAFTALSCRGLARVDFFVTDHGPVLNEINTMPGFTPISMY FT PQVFEATGIGYAQLLDNLIEQALHK" FT misc_feature 1116379..1117413 FT /note="HMMPfam hit to PF01820, D-ala D-ala ligase" FT misc_feature 1116685..1116720 FT /note="ScanRegExp hit to PS00843, D-alanine--D-alanine FT ligase signature 1." FT misc_feature 1117249..1117332 FT /note="ScanRegExp hit to PS00844, D-alanine--D-alanine FT ligase signature 2." FT CDS complement(1117438..1118376) FT /transl_table=11 FT /locus_tag="DIP1132" FT /product="Putative exported protein" FT /note="Similar to Mycobacterium leprae possible secreted FT protein ML1677 TR:Q9CBS1 (EMBL:AL583923) (191 aa) fasta FT scores: E(): 8.9e-13, 32.447% id in 188 aa, and to FT Mycobacterium tuberculosis hypothetical 18.8 kDa protein FT Rv2980 or MTCY349.07c TR:P95115 (EMBL:Z83018) (181 aa) FT fasta scores: E(): 1.5e-09, 31.098% id in 164 aa" FT /protein_id="CAE49652.1" FT /translation="MHSDDSFRRGPIVIALVLSIVLVVGVLAGAKLVYDKAAHQPVAMS FT DVGSPLGDSAQCHDFLEALPEHVLGHKRAQIADPAPAGAAAWQSDSTRRVTIRCGVDAP FT LQFTALSERIDAANAEWVEVGDATPGSTLRTWYSVDRFPIVAVTADAEALGEHETPLEE FT LEGAVSVLENKETKPHPIPLTDLQVHAGEEHSATCRALLKSVPDSFGKDITYRKNTTVS FT LPDGSAVWTAAGFEPVVLRCGVEFPKSYKAGERLNQINSVPWFEDTTLRNGTTASTHYA FT LDQKATVAVNLPHEAGNAALVAITEALESIR" FT misc_feature complement(1118275..1118340) FT /note="1 probable transmembrane helix predicted for DIP1132 FT by TMHMM2.0" FT misc_feature complement(1118287..1118376) FT /note="Signal peptide predicted for DIP1132 by SignalP 2.0 FT HMM (Signal peptide probability 0.977) with cleavage site FT probability 0.470 between residues 30 and 31" FT misc_feature 1118432..1129756 FT /note="anomalous G+C content, GC bias and dinucleotide FT signature" FT CDS 1118468..1119457 FT /transl_table=11 FT /gene="thiL" FT /locus_tag="DIP1133" FT /product="thiamine-monophosphate kinase" FT /EC_number="2.7.4.16" FT /note="Similar to Escherichia coli thiamine-monophosphate FT kinase ThiL or B0417 SW:THIL_ECOLI (P77785) (325 aa) fasta FT scores: E(): 6.4e-12, 32.157% id in 255 aa, and to FT Mycobacterium leprae probable thiamine-monophosphate kinase FT ThiL or ML1676 TR:Q9CBS2 (EMBL:AL583923) (325 aa) fasta FT scores: E(): 1.1e-35, 43.385% id in 325 aa, and to Bacillus FT subtilis thiamine-monophosphate kinase ThiL SW:THIL_BACSU FT (O05514) (325 aa) fasta scores: E(): 1.6e-15, 32.197% id in FT 264 aa" FT /protein_id="CAE49653.1" FT /translation="MTEEHIRNNPTLKEVGEQAAINVITAHAPSSRNGDDAAVLSHAGA FT NSRAVVTTDMLVENRHFRLDWSTPAEIGRKAITQNFADIEAMGARPVAALLAISAPAYT FT RLQFVSDLARGIAERVSDYSAELVGGDITDGDAIVLSVTAVGQLGGSLPELALDRARSG FT HTVIVSGVIGESAAGLALLNRFGRDGVPERFMPLVSAHCATYVPEGRGFVARAAGVSSL FT TDNSDGLIVDLRTMARKSGVVIDLDPSAIQPSALMREAAEILEEDPWHWVLGGGEDHTL FT MGTTAHAVPTGFRKIGTVIKRSNQPTHAAGEVLVGGEAPAYDDGWVSF" FT CDS 1119460..1120128 FT /transl_table=11 FT /gene="ung" FT /locus_tag="DIP1134" FT /product="uracil-DNA glycosylase" FT /EC_number="3.2.2.-" FT /note="Similar to Mycobacterium tuberculosis uracil-DNA FT glycosylase Ung or Rv2976c or MT3053 or MTCY349.11 FT SW:UNG_MYCTU (P95119) (227 aa) fasta scores: E(): 1.3e-55, FT 64.159% id in 226 aa, and to Bacillus subtilis uracil-DNA FT glycosylase Ung or IPA-57D SW:UNG_BACSU (P39615) (225 aa) FT fasta scores: E(): 5.5e-34, 45.872% id in 218 aa" FT /protein_id="CAE49654.1" FT /translation="MNNTPLPVHPSWIEPLAPVTDNIHAMGDFLRNEIAQGRGYLPAGS FT DILRAFQYPFDDIKVLIVGQDPYPTPGHAMGLSFSTQPGVRPLPRSLANIFKELSADLG FT IPAPTDGDLTAWSRQGVALFNRVLSVQPGNAGSHRKKGWETITETAIRALAQRNTPLVA FT ILWGKDAQTTQAFLGDTPVITSPHPSPLSASRGFFGSRPFSRANTILEQLGTTPINWEL FT " FT misc_feature 1119460..1120119 FT /note="BlastProDom hit to PD011327, PD011327" FT misc_feature 1119487..1120125 FT /note="HMMPfam hit to PF00315, Uracil-DNA glycosylase" FT misc_feature 1119580..1120125 FT /note="BlastProDom hit to PD001589, PD001589" FT misc_feature 1119619..1119648 FT /note="ScanRegExp hit to PS00215, Mitochondrial energy FT transfer proteins signature." FT misc_feature 1119634..1119663 FT /note="ScanRegExp hit to PS00130, Uracil-DNA glycosylase FT signature." FT CDS 1120294..1121799 FT /transl_table=11 FT /locus_tag="DIP1135" FT /product="Putative kinase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 46.7 kDa protein Rv2974c or MTCY349.13 TR:P95121 FT (EMBL:Z83018) (470 aa) fasta scores: E(): 4e-28, 33.402% id FT in 485 aa, and to Clostridium acetobutylicum predicted FT kinase related to hydroxyacetone kinase YloV ortholog FT CAC1735 TR:AAK79701 (EMBL:AE007682) (547 aa) fasta scores: FT E(): 3.8e-21, 25.690% id in 471 aa" FT /protein_id="CAE49655.1" FT /translation="MPDSDTGSNMAHTMTAAVQQAQGVDNPDDLAAVAMALATGAVKGA FT RGNSGVVLSQVLRGIAHHADSGRIDAHVIQEALRSSLDFVAAAISDPVEGTVITVLRAA FT AIAATNSEDRSLAAVVSVAAHAARIALAETPSQLQVLRDAKVVDAGGQGLVILLDCLEH FT VVTGTATSYDPHIIETTEQQQSHGTSGYLEVMCFIAGVEVSHLHDLLAPLGDCLVIGPI FT SDTSATVHIHSTDAATVISTLYATGTITDLHIEVLPETPKVVHPKRIVLALTPPGDLAQ FT LYTDAGALVVVRDGHHFAIARSTNLGQAETPLADGIEIVNELVARSHQSGAQEVILLPN FT GLLTTQEMAAVERSSQAFKQSITMLPTGSLVRGLAALSVHDPQQSLAVATYAMTEAMSG FT MRTAVIERAEHAALTPAGACAKGDLLVHLGTEPIAVAEQPEEALRIACRRLLDIGGEQI FT LILARKELALTPDNHSLTGPHTDVEINQYDVDRLGALIEIGVE" FT misc_feature 1120294..1120782 FT /note="HMMPfam hit to PF02734, DAK2 domain" FT CDS 1121804..1123918 FT /transl_table=11 FT /gene="recG" FT /locus_tag="DIP1136" FT /product="ATP-dependent DNA helicase" FT /EC_number="3.6.1.-" FT /note="Similar to Bacillus subtilis ATP-dependent DNA FT helicase RecG SW:RECG_BACSU (O34942) (682 aa) fasta scores: FT E(): 3.3e-69, 33.862% id in 694 aa, and to Escherichia coli FT ATP-dependent DNA helicase RecG or B3652 SW:RECG_ECOLI FT (P24230) (693 aa) fasta scores: E(): 8.9e-63, 34.765% id in FT 722 aa" FT /protein_id="CAE49656.1" FT /translation="MLGWHDQRPLAQLLPAKEAKAFSRHFSFTTVEDLLQHFPRGYAAH FT GTGLAAEAAEEGDIITCVGTIVDTHEHPDRNGYSIYSVVISDGFTRSTATFFRATWIKK FT VLTHGAQGIFTGKLKFFRNTPQLQHPDFFLFPEKGKKATGTGGMQALSTTGELDDITDI FT LVAMSYLPVYPAKKAIPTWRILGAVHNILTHTPHIADPLHEFAPHDLPSFDQALRGIHE FT PDEHGPQHYITRIKYDEALTLALVMALRRADTQRRHAYPIPPTNDGLRAHMLSHLPFEL FT TEGQHNVLTEISADLAQPTPMSRLLQGEVGSGKTIVSLLAMLQVIDDGKQCVLLAPTEV FT LAAQHATSITQQLTNAGININVTLLTGSLPTEQRRKALFNIISGDANLIIGTHALIQEG FT IEFFDLALCVIDEQHRFGVEQRDHLRNQGRDTNTPHVLVMTATPIPRSIAMTAFGDLSV FT STLKQLPGGRRPIHSYVIDHQHTTWTTRMWERIREEIDKGHQIYIVCPKIKDSGGVEET FT THQLTTGILANYRIAMLHGAMHPEDKDTTMKAFAAGTIDVLVATTVIEVGIDVPNATVM FT LIRESENFGVSQLHQLRGRVGRGGNESICFFHTTAQPTTPAHNRVTAVAATTDGFELAE FT IDLTYRHEGNILGTQQSGHTNRIISFIHDKDLIERANNDATHIVTHNPQLARHLVADID FT DTTQTYIDKS" FT misc_feature 1121999..1122025 FT /note="ScanRegExp hit to PS01137, TatD deoxyribonuclease FT family signature 1." FT misc_feature 1122617..1123195 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 1122632..1123219 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 1122725..1122748 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1122797..1123597 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 1122956..1122988 FT /note="ScanRegExp hit to PS00435, Peroxidases proximal FT heme-ligand signature." FT misc_feature 1123346..1123603 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT CDS 1123946..1124167 FT /transl_table=11 FT /locus_tag="DIP1137" FT /product="Putative biotin carboxyl carrier protein" FT /note="Similar to C-terminus of Mycobacterium smegmatis FT pyruvate carboxylase Pyc TR:Q9F843 (EMBL:AF262949) (1127 FT aa) fasta scores: E(): 1.9e-05, 47.761% id in 67 aa, to FT Bacillus subtilis YngXX TR:Q9R9I3 (EMBL:AF184956) (73 aa) FT fasta scores: E(): 0.0043, 36.765% id in 68 aa, and to FT Propionibacterium freudenreichii shermanii biotin carboxyl FT carrier protein of methylmalonyl-CoA carboxyl- transferase FT SW:BCCP_PROFR (P02904) (123 aa) fasta scores: E(): 0.0079, FT 38.806% id in 67 aa" FT /protein_id="CAE49657.1" FT /translation="MKICAPFAGIVHYKVSLGDTVTTGQELASVEATKLEAPIIAPGPG FT IVAEITSSDFDDVVGGDVILRVVSQEKP" FT misc_feature 1123946..1124146 FT /note="HMMPfam hit to PF00364, Biotin-requiring enzyme" FT CDS 1124164..1124742 FT /transl_table=11 FT /locus_tag="DIP1138" FT /product="Putative DNA methylase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 19.8 kDa protein Rv2966c or MTCY349.21 TR:P95128 FT (EMBL:Z83018) (188 aa) fasta scores: E(): 2.6e-22, 42.703% FT id in 185 aa, and to Streptomyces coelicolor putative FT methylase SC7A1.11 TR:Q9ZBR2 (EMBL:AL034447) (195 aa) fasta FT scores: E(): 1.2e-21, 44.505% id in 182 aa" FT /protein_id="CAE49658.1" FT /translation="MTRIISGEARGRTIKVPEHGTRPTSDRAREGLFSSLQVRFGFAGA FT RVLDLFAGSGALGLEAASRGAESVVLVENNPKAVAVIRHNIAVVGHPHVDVVEMKASTY FT VASAPKNHFDMVLADPPYDLDDQAVVEMLHALIPTLVDGAAVVVERHRDSSETAWPACF FT VPTTQKLKKRTFGIARMDMAVFHAELVEE" FT misc_feature 1124299..1124616 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 1124386..1124430 FT /note="ScanRegExp hit to PS00579, Ribosomal protein L29 FT signature." FT misc_feature 1124509..1124529 FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT CDS 1124750..1125229 FT /transl_table=11 FT /gene="coaD" FT /gene_synonym="kdtB" FT /locus_tag="DIP1139" FT /product="phosphopantetheine adenylyltransferase" FT /EC_number="2.7.7.3" FT /note="Similar to Mycobacterium tuberculosis FT phosphopantetheine adenylyltransferase CoaD or KdtB or FT Rv2965c or MT3043 or MTCY349.22 or u0002E SW:COAD_MYCTU FT (Q50452) (161 aa) fasta scores: E(): 3e-32, 54.717% id in FT 159 aa, and to Mycobacterium leprae phosphopantetheine FT adenylyltransferase CoaD or KdtB or ML1663 or MLCB1243.10 FT SW:COAD_MYCLE (O69466) (160 aa) fasta scores: E(): 3.4e-31, FT 54.777% id in 157 aa" FT /protein_id="CAE49659.1" FT /translation="MRKAVCPGSFDPVTMGHLDIIGRAAQQYDEVTVLVTANPNKPSGM FT FTVDERLALIKESTAHFVNVKVDNWAGLLVDYTTANGIDAIVKGLRTALDYEYELPMAQ FT MNRKLAGVDTLFLMTDPQYGYISSTLCKEVTKYGGDVSDMLPPAVAAAIVEKVKS" FT misc_feature 1124750..1125148 FT /note="HMMPfam hit to PF01467, Cytidylyltransferase" FT misc_feature 1124753..1124809 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT misc_feature 1124807..1124872 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT misc_feature 1125005..1125055 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT misc_feature 1125083..1125151 FT /note="FPrintScan hit to PR01020, Lipopolysaccharide core FT biosynthesis protein signature" FT CDS 1125316..1125474 FT /transl_table=11 FT /locus_tag="DIP1140" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49660.1" FT /translation="MALVVFGATYLPPTRGKIPAIVAGIAGGFMNTLAGAAGPAITVYA FT QALKWDQ" FT misc_feature 1125316..1125450 FT /note="Signal peptide predicted for DIP1140 by SignalP 2.0 FT HMM (Signal peptide probability 0.860) with cleavage site FT probability 0.743 between residues 45 and 46" FT misc_feature 1125376..1125444 FT /note="1 probable transmembrane helix predicted for DIP1140 FT by TMHMM2.0" FT CDS 1125604..1125777 FT /transl_table=11 FT /locus_tag="DIP1141" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49661.1" FT /translation="MFLGISLGARASKMVSRTHARKLALLLATGGGVSAVVRGLTGIQE FT RVPHDRNSRGAP" FT misc_feature 1125604..1125708 FT /note="Signal peptide predicted for DIP1141 by SignalP 2.0 FT HMM (Signal peptide probability 0.844) with cleavage site FT probability 0.333 between residues 35 and 36" FT CDS complement(1125798..1126565) FT /transl_table=11 FT /gene="atrC" FT /locus_tag="DIP1142" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Streptomyces coelicolor ATP-binding FT protein AtrC SWALL:Q9F3K7 (EMBL:AL391763) (253 aa) fasta FT scores: E(): 5.1e-58, 68% id in 250 aa, and to Rhizobium sp FT TAL1145 MidC SWALL:Q9EYT0 (EMBL:AF312768) (265 aa) fasta FT scores: E(): 1.9e-52, 60.78% id in 255 aa" FT /protein_id="CAE49662.1" FT /translation="MTDNLMIDAQKLCKNYGQLSVLKGIDLQVPQGTVTCLIGPSGSGK FT STLLRCVNHLEKISGGRLYVDGELIGYRERGGVLYEISEKEAARQRSGIGMVFQNFNLF FT PHRTVIENIIEAPVHVKGVSESEARSRGMALLKQVGLEHKADAYPAQLSGGQQQRVAIA FT RAVAMEPKLMLFDEPTSALDPELVGEVLRVMRELAQGGMTMLVVTHEMGFAREVADTVA FT FMDGGVIVEQGPAEQVIDNPQHERTKAFLSSLL" FT misc_feature complement(1125882..1126475) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(1125885..1126472) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(1125897..1126112) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(1126068..1126112) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(1126410..1126466) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(1126428..1126451) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1126569..1127513) FT /transl_table=11 FT /locus_tag="DIP1143" FT /product="Putative ABC transport system membrane protein" FT /note="Similar to Streptomyces coelicolor permease AtrB FT SWALL:Q9F3K6 (EMBL:AL391763) (316 aa) fasta scores: E(): FT 7.1e-49, 50.72% id in 276 aa, and to Rhizobium meliloti FT putative amino acid uptake ABC transporter permease protein FT RB0674 or SMB21095 SWALL:CAC49074 (EMBL:AL603644) (290 aa) FT fasta scores: E(): 3.5e-37, 42.96% id in 263 aa" FT /protein_id="CAE49663.1" FT /translation="MTSPQPIQAKPLRHPGRWVAAIIILALFVWFLISAATNDAYGWDI FT YRQYLFDTRIASAAVHTLAITILSMLMGVVLGCIVAIMRMSPNPVLRGISWFYLWIFRG FT TPVYVQLVFWGLLGSIYSGINLGFTEISLENLLSNMFILAVVGLGLNEAAYMSEIVRSG FT IQAVPEGQTEASKALGMSWWMTIRRTVLPQAMRIIVPPTGNEFISLLKTTSLVVAIPYT FT SELYGRATDIAAALFDPVPLLLVAATWYLVITSLLMVAQHYLEKYYDRGATRQLTARQL FT AALADAEGTLPKNVDIIAETPKPHTPRTPKKGA" FT misc_feature complement(order(1126722..1126787,1127043..1127108, FT 1127130..1127195,1127274..1127339,1127403..1127468)) FT /note="5 probable transmembrane helices predicted for FT DIP1143 by TMHMM2.0" FT misc_feature complement(1126812..1127027) FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport systems inner membrane component" FT misc_feature complement(1126938..1127024) FT /note="ScanRegExp hit to PS00402, Binding-protein-dependent FT transport systems inner membrane comp. sign." FT misc_feature complement(1127187..1127234) FT /note="ScanRegExp hit to PS00225, Crystallins beta and FT gamma 'Greek key' motif signature." FT misc_feature complement(1127409..1127513) FT /note="Signal peptide predicted for DIP1143 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.477 between residues 35 and 36" FT CDS complement(1127571..1128464) FT /transl_table=11 FT /locus_tag="DIP1144" FT /product="Putative secreted protein" FT /note="Similar to Rhizobium spTAL1145 MidA SWALL:Q9EYT2 FT (EMBL:AF312768) (281 aa) fasta scores: E(): 4.6e-18, 30.36% FT id in 247 aa, and to Escherichia coli glutamine-binding FT periplasmic protein precursor GlnH or B0811 or Z1033 or FT ECS0889 SWALL:GLNH_ECOLI (SWALL:P10344) (248 aa) fasta FT scores: E(): 1.1e-13, 30.55% id in 252 aa" FT /protein_id="CAE49664.1" FT /translation="MTIRSHVVAICATVALALPLTACVTNEEQGHPDSWVEVTPAAVPE FT IAAMVPQDLADRGTLVAGANPPFAPFEFKDSNHNIIGMEMDLMQAISAVMGLKYEAQQQ FT DFSLILPSLSAGTIDVGASGFTDNDERRENYDFVDFLYAGIQWGVQKDSSVSRENPCGL FT TIAVQRTTVAETDDAHPLREKCIAEGKKPVEILPYATSDQAATALVLGRADVFSADSPV FT VGWAVERAEGKLTTTGEIFDAAPYGFAVPKGSPLGPAIAAALEHLIKTGDYQKILNMWG FT VKEGYVEQGMINEKPI" FT misc_feature complement(1127613..1128290) FT /note="HMMSmart hit to SM00062, Bacterial periplasmic FT substrate-binding proteins" FT misc_feature complement(1127616..1128287) FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding proteins, family 3" FT misc_feature complement(1127703..1128257) FT /note="ProfileScan hit to PS50121, Solute binding FT protein/glutamate receptor domain." FT misc_feature complement(1128375..1128464) FT /note="Signal peptide predicted for DIP1144 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.626 between residues 30 and 31" FT CDS complement(1128534..1129466) FT /transl_table=11 FT /locus_tag="DIP1145" FT /product="Putative membrane protein" FT /note="Similar to Vibrio cholerae hypothetical protein FT VCA0040 SWALL:Q9KNC5 (EMBL:AE004347) (308 aa) fasta scores: FT E(): 3.4e-22, 31.48% id in 270 aa, and to FT Methanothermobacter thermautotrophicus hypothetical 35.5 FT kDa protein MTH465 SWALL:O26565 (EMBL:AE000831) (319 aa) FT fasta scores: E(): 2.9e-18, 31.12% id in 241 aa" FT /protein_id="CAE49665.1" FT /translation="MTSPVKANTNKTRPINAVINVVFGALIGLAELVPGVSGGTVALVA FT GIYERAIHNGNALVHIVRVLISDRSQLKTSIKSVEWGFLASVAVGMIGAVFTMSSVMHH FT FVDHHPITARALFLGMVSVSIVVPLRMIRAESLSSQKLPALLLFVFGAIATFFATSMTS FT EPKTDPSLLIVFFVAMVAVCALVLPGVSGSFILLALGFYEPIIQAVSDRNFTIIAVFAA FT GAITGLACFIKVLDVLMTRHHTLTLATMAGMMLGSLRALWPWQTDNADLLWPPAGSGTT FT FGFIALGAVVVACVVLAEILLERKNSHHK" FT misc_feature complement(order(1128564..1128629,1128675..1128740, FT 1128762..1128827,1128888..1128953,1128990..1129040, FT 1129071..1129136,1129158..1129223,1129338..1129403)) FT /note="8 probable transmembrane helices predicted for FT DIP1145 by TMHMM2.0" FT misc_feature complement(1129353..1129466) FT /note="Signal peptide predicted for DIP1145 by SignalP 2.0 FT HMM (Signal peptide probability 0.638) with cleavage site FT probability 0.222 between residues 38 and 39" FT tRNA complement(1129683..1129756) FT /gene="tRNA-Leu" FT /product="transfer RNA-Leu" FT /anticodon=(pos:1129720..1129722,aa:Leu) FT /note="tRNA Leu anticodon CAA, Cove score 39.37" FT CDS 1129828..1132527 FT /transl_table=11 FT /gene="polA" FT /locus_tag="DIP1146" FT /product="DNA polymerase I" FT /note="Similar to Streptomyces griseus DNA polymerase I FT PolA SWALL:Q9F179 (EMBL:AF051319) (889 aa) fasta scores: FT E(): 0, 72.61% id in 891 aa, and to Bacillus caldotenax DNA FT polymerase I PolA SWALL:DPO1_BACCA (SWALL:Q04957) (877 aa) FT fasta scores: E(): 2.3e-119, 41.5% id in 901 aa" FT /protein_id="CAE49666.1" FT /translation="MLDVLVTLAIVTSNANRLMLIDGHSMAFRAFYALPAENFSTSGGQ FT ATNAVYGFLSMLSSLLVEEKPTHVAVAFDVGRQTFRTEMFPEYKAQREAAPPEFKGQVE FT IIKEVLETLGITTLEKENFEADDIIATLATAAGPLGFDTYIVTGDRDSFQLVNESTTVL FT YPMRGVSVLHRFTPEAVEEKYGLTPVQYPDFAALRGDPSDNLPNIPGVGEKTATKWIVQ FT YGNLDSLLAHADEIKGKAGNSFRERLDQVRMNRTLTEMIKDLELPYAPDQLERKPADAS FT AIASKFDELEFGSNLRDRVIHAVDAQGNVSEESEEYKPEVVIDHEKLASWLATRAGQSL FT ALYVRGHGSPASGDAESAAIVDKQFHAVAFDFGDLDADDDQAFAQWIASDSPKYLHEAK FT AVFHMLAGRGYTLNGIEHDTAIAGYLLRPGQRTYDLKDVYQRHLQRQLGGGSSESGQLS FT LLDAPDAQELVDSAVAILELSKSLTAQLQAIDAYELYREMELPLVGVLARMEATGICVD FT VATLREQRDIFVEQVKEEESAARELAGDETLNLSSPKQLQVVLFDTLGLPKTKKTKTGY FT STAAKEIESLAVKNPHPFLDHLLAHREFQKMKTTLDGLIKAVGDDGRIHTTFNQTVAST FT GRLSSTEPNLQNIPVRTPAGRKIRSAFVVGQGYKSLLTADYSQIEMRVMAHLSEDPGLI FT EAYQTGEDLHNFVGSKVFDVPVDQVTPELRRRVKAMSYGLVYGLSAFGLSQQLNIPAGE FT AKVIMESYFERFGGVKRYLDQVVEQARKDGFTSTLFGRRRYLPELSSDNRVARENAERA FT ALNAPIQGTAADIIKIAMLRVDARLTAENCQSRVLLQVHDELVLEVASGEQEKVQQLVE FT EEMDAAISLRVPLEVSAGVGTNWEEAAH" FT misc_feature 1129873..1130379 FT /note="HMMPfam hit to PF02739, 5'-3' exonuclease, FT N-terminal resolvase-like domain" FT misc_feature 1129873..1130655 FT /note="HMMSmart hit to SM00475, 5'-3' exonuclease" FT misc_feature 1129879..1130103 FT /note="ProfileScan hit to PS50182, 5'3'-Exonuclease FT N-domain." FT misc_feature 1130116..1130499 FT /note="ProfileScan hit to PS50183, 5'3'-Exonuclease FT I-domain." FT misc_feature 1130383..1130682 FT /note="HMMPfam hit to PF01367, 5'-3' exonuclease, FT C-terminal SAM fold" FT misc_feature 1130389..1130496 FT /note="HMMSmart hit to SM00279, Helix-hairpin-helix class 2 FT (Pol1 family) motifs" FT misc_feature 1130782..1131288 FT /note="HMMSmart hit to SM00474, 3'-5' exonuclease" FT misc_feature 1131373..1132518 FT /note="HMMPfam hit to PF00476, DNA polymerase family A" FT misc_feature 1131697..1131765 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1131766..1131813 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1131790..1132413 FT /note="HMMSmart hit to SM00482, DNA polymerase A domain" FT misc_feature 1131835..1131906 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1131925..1131966 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1131997..1132056 FT /note="ScanRegExp hit to PS00447, DNA polymerase family A FT signature." FT misc_feature 1131997..1132074 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1132108..1132143 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1132174..1132209 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1132270..1132320 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT misc_feature 1132360..1132401 FT /note="FPrintScan hit to PR00868, DNA-polymerase family A FT (pol I) signature" FT CDS complement(1132577..1133344) FT /transl_table=11 FT /locus_tag="DIP1147" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 24.3 FT kDa protein SC7H2.13 SWALL:Q9S2K4 (EMBL:AL109732) (220 aa) FT fasta scores: E(): 1.4e-39, 50% id in 216 aa, and to FT Bacillus halodurans BH0355 protein SWALL:Q9KFW5 FT (EMBL:AP001508) (246 aa) fasta scores: E(): 1.3e-10, 28.51% FT id in 242 aa" FT /protein_id="CAE49667.1" FT /translation="MMNISHKDHHNDQEISDANRDWWDSDAQRYHNDHAAYLNGFHWCP FT EMLPEREAHLLGDISGLNVLEIGCGSAPCSRWLFDNYDAFVTGFDLSMGMLRHSPTDVP FT LTQADAVNLPYKDSSFDIAFSAFGAFPFIENLGPVLKDIARCLKPHGKLVFSTNHPMRW FT IFPDDPTEIGLCAELSYFDRSYTERDKNGKITYAEFHRTMGDWIELLNASGFIIDRLIE FT PEWPTNLTETWGQWSPLRGRIFPGTAIFVTHCR" FT misc_feature complement(1132871..1133176) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS 1133555..1135015 FT /transl_table=11 FT /gene="rpsA" FT /locus_tag="DIP1148" FT /product="30S ribosomal protein S1" FT /note="Similar to Corynebacterium ammoniagenes 30s FT ribosomal protein S1 RpsA SWALL:Q9LBD0 (EMBL:AF045481) (489 FT aa) fasta scores: E(): 6e-160, 92.18% id in 486 aa, and to FT Escherichia coli 30S ribosomal protein S1 RpsA or SsyF or FT B0911 or Z1257 or ECS0994 SWALL:RS1_ECOLI (SWALL:P02349) FT (557 aa) fasta scores: E(): 2.9e-52, 44.97% id in 358 aa" FT /protein_id="CAE49668.1" FT /translation="MPTNNVPQVAINDIGTAEDFLAAVDATIKYFNDGDIVEGTVVKVD FT HDEVLLDIGYKTEGVIPSRELSIKHDVDPDEVVEVGDQIDALVLTKEDKEGRLILSKKR FT AQYERAWGAIEELKEKDEPVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLDPYI FT GQQIEAKIIELDKQRNNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGA FT FVDLGGVDGLVHVSELSWKHIDHPSEVVTVGDEVTVEVLDVDLDRERVSLSLKATQEDP FT WRVFARTHAVGQIVPGRVTKLVPFGAFVRVEEGIEGLVHISELAQRHVEVPDQVVNVGD FT EAMVKVIDIDLERRRISLSLKQADEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDPETN FT EWLEGFDEQRQAWEARYAESERRFQLHTVQIEKNRVAAAEAAAAGEATNYSSESAEAAP FT AAANTEAEGGSLASDEQLAALREKLAGN" FT misc_feature 1133642..1133863 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 1133648..1133863 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 1133654..1133710 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1133654..1133863 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 1133708..1133752 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1133852..1133911 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1133903..1134112 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 1133909..1134112 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 1133915..1134112 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 1133924..1133974 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1133975..1134028 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1134062..1134124 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1134161..1134379 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 1134167..1134379 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 1134173..1134379 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 1134233..1134298 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1134416..1134637 FT /note="HMMPfam hit to PF00575, S1 RNA binding domain" FT misc_feature 1134422..1134637 FT /note="HMMSmart hit to SM00316, Ribosomal protein S1-like FT RNA-binding domain" FT misc_feature 1134428..1134637 FT /note="ProfileScan hit to PS50126, S1-motif (ribosomal)." FT misc_feature 1134467..1134526 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1134584..1134640 FT /note="FPrintScan hit to PR00681, Ribosomal protein S1 FT signature" FT misc_feature 1134860..1134988 FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT stem_loop 1135038..1135078 FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(1135099..1136511) FT /transl_table=11 FT /locus_tag="DIP1149" FT /product="Putative transport protein" FT /note="Similar to Pasteurella multocida hypothetical FT protein PM0933 SWALL:Q9CMA1 (EMBL:AE006132) (462 aa) fasta FT scores: E(): 9.1e-43, 32.62% id in 469 aa, and to FT Escherichia coli anaerobic C4-dicarboxylate transporter FT DcuC or B0621 or Z0766 or ECS0660 SWALL:DCUC_ECOLI FT (SWALL:Q47134) (461 aa) fasta scores: E(): 9.6e-19, 31.76% FT id in 466 aa" FT /protein_id="CAE49669.1" FT /translation="MLYLLIALISFAAVMYLIIKKVNAAAAIFFVGVLLLMIAAISGKA FT EPSVEIKPSGNSFYDELLVIEALFKSRFSGIGMAIMVLFGFVSYMRTIGADAKAVVLLS FT APLQKMRGSYWMVPIGFTIGTALSLIVPSASALSLLLVATLLPALVAAGLTPLTVAAII FT VTSSTIVATPLEAGLIQGADLVGMPISEYVYGNVAKATIPTLVITAFVHMAWQHHCDKV FT DARKSALPTSDAPSIQHDTSAVDDALRRAAGLPAYYALLPLLPLLLILVTAVLHRADLL FT SFEAGILPVTIVSLFISLIIEAIRHRSLMNALETVKLFFKGMGEGAAGVVALLVAAAVL FT VEGVTQLGVIDMLINATEGSSGATVIIILAFVASTALMSALTGSGTAPYFAFSEVVPSL FT AAQTGVLPVQMLTAIWGTSNLMRQVSPVNAAVIIVSTAINVSPIKLVKRTSVPMIVATI FT LNVVFAFLFIHV" FT misc_feature complement(order(1135105..1135161,1135183..1135233, FT 1135279..1135344,1135366..1135431,1135462..1135527, FT 1135591..1135656,1135687..1135752,1135867..1135932, FT 1136020..1136085,1136101..1136166,1136227..1136292, FT 1136383..1136439,1136455..1136511)) FT /note="13 probable transmembrane helices predicted for FT DIP1149 by TMHMM2.0" FT CDS complement(1136731..1137558) FT /transl_table=11 FT /locus_tag="DIP1150" FT /product="Putative transcription antiterminator" FT /note="Similar to Bacillus subtilis transcription FT antiterminator LicT or N15A SWALL:LICT_BACSU (SWALL:P39805) FT (277 aa) fasta scores: E(): 2.6e-20, 28.72% id in 275 aa, FT and to Escherichia coli cryptic beta-glucoside Bgl operon FT antiterminator BglG or BglC or B3723 SWALL:BGLG_ECOLI FT (SWALL:P11989) (278 aa) fasta scores: E(): 1.4e-18, 27.33% FT id in 278 aa" FT /protein_id="CAE49670.1" FT /translation="MQILRVFNNNVVLARRDDEEVIVTGRGLGFQAKTGDDVDPTKVVR FT VFVPADGRDPDHSALMLAAIPGEYIRLVLEAMERAGLSEKLRSTLTLVIALADHVHAAS FT TRTKSVEYPLEAEVRHLYAEDFHSAQRLLKEINSELQRPLHEAEAIALTLHIVNAGFSV FT GDLSGTYRMTGLIEQLLEIIGGFYGTTLSGEDISVARFITHLRYLFVRMAEHKQLDSPT FT ARVASTIAEQYPTAAQCAEALSAIIELRMNAPLTAEEVSYLTLHVARLGADNR" FT misc_feature complement(1137082..1137360) FT /note="HMMPfam hit to PF00874, Transcriptional FT antiterminator bglG family" FT misc_feature complement(1137385..1137558) FT /note="HMMPfam hit to PF03123," FT CDS complement(1137670..1139700) FT /transl_table=11 FT /gene="ptsG" FT /locus_tag="DIP1151" FT /product="PTS system, glucose-specific IIABC component" FT /EC_number="2.7.1.69" FT /note="Similar to Corynebacterium glutamicum PTS system, FT glucose-specific IIABC component PtsG SWALL:PTGA_CORGL FT (SWALL:Q45298) (674 aa) fasta scores: E(): 2.8e-59, 44.91% FT id in 688 aa, and to Staphylococcus xylosus PTS system, FT sucrose-specific IIBC component ScrA SWALL:PTSB_STAXY FT (SWALL:P51184) (480 aa) fasta scores: E(): 8e-26, 27.73% id FT in 494 aa" FT /protein_id="CAE49671.1" FT /translation="MSTQTREDTARAILDGIGGASNITSFTHCATRLRFELADASKVDK FT AALDSIPKVMGAVPQGGRNYQVVIGGDVANVYDDMTHLPEMKSAAPSDADIKAAARAKS FT KGKLPWMDSFFEYLSDSFRPILGVLLGASLIIAFTAVLDAFHIVDFRADDKSASWVFVD FT AMWRSVFYFLPVMVAFNAGKKLRIDPWVPAAIMFALFTPEFLGLKESSTAECVTNAALG FT TETCHAPIFGINMTFPDYGGNVFVPLIMAAVAAVVYKGFQKVIPTAVHMVFVPFLTLVI FT MIPVTAFIIGPFGTWAGNGIGLGLSWMNENAPFVFALAIPLLYPFLVPLGLHWPLNALM FT LINIQTLGYDFIQGPMGTWNFACFGATAGVLALSIRDKDTVMRQTAGSALAAGLLGGIS FT EPSLYGIHLRFKRVYPRMLAGCFAGGLTIAVLSTIFEPVTTNAFVFTSIPTMFVFNPAW FT IYMVSILVAFTVAFLAIFITDYRTTEEKAEFFARRDSADDVPAATVPSATTPAPAAAAA FT NPAGECKVGSPISGEVLPMAEIADPVFSAGTLGDGVGVNPTATAGAGTEVYSPVSGTVK FT SAMKSGHAYGIKTDDGVEVLVHIGIDTVQMKGEGFTPAVQKGDRVEAGQKLATVDYDKV FT RAAGYGTTIVVAVTNTKAMKAVTPTGVKHAGAGDTIFTVTQ" FT misc_feature complement(1137751..1138080) FT /note="BlastProDom hit to PD002243, PD002243" FT /note="HMMPfam hit to PF00358, FT phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 1" FT misc_feature complement(1137889..1137927) FT /note="ScanRegExp hit to PS00371, PTS EIIA domains FT phosphorylation site signature 1." FT misc_feature complement(order(1138270..1138335,1138381..1138446, FT 1138582..1138647,1138693..1138758,1138819..1138884, FT 1138930..1138980,1139164..1139229,1139260..1139325)) FT /note="8 probable transmembrane helices predicted for FT DIP1151 by TMHMM2.0" FT misc_feature complement(1138441..1139349) FT /note="HMMPfam hit to PF02378, Phosphotransferase system, FT EIIC" FT misc_feature complement(1139569..1139673) FT /note="BlastProDom hit to PD001476, PD001476" FT /note="HMMPfam hit to PF00367, phosphotransferase system, FT EIIB" FT misc_feature complement(1139584..1139637) FT /note="ScanRegExp hit to PS01035, PTS EIIB domains cysteine FT phosphorylation site signature." FT CDS 1140082..1140684 FT /transl_table=11 FT /gene="coaE" FT /locus_tag="DIP1152" FT /product="dephospho-CoA kinase" FT /EC_number="2.7.1.24" FT /note="Similar to Corynebacterium glutamicum dephospho-CoA FT kinase CoaE SWALL:COAE_CORGL (SWALL:P56187) (195 aa) fasta FT scores: E(): 7.6e-25, 50.81% id in 185 aa, and to FT Escherichia coli dephospho-CoA kinase CoaE or B0103 or FT Z0113 or ECS0107 SWALL:COAE_ECOLI (SWALL:P36679) (206 aa) FT fasta scores: E(): 2.4e-15, 38.37% id in 185 aa" FT /protein_id="CAE49672.1" FT /translation="MRIIGLTGGIGSGKSTVARIWQGCGAIVIDADAIARVLMEPGSTV FT LEEVSQVFGRDLLDAEGKLRRAELAARAFISEEKTAQLNSITHPAIRRQIRRGIECARA FT EGVQVLVLDHPLLFESGMSDLVDDVVVVDVPAELRVRRLVDLRGLKEEDARHRIMRQMS FT DEDRRMRADYVIDNSGSRDVLERLARELWQRFATQVE" FT misc_feature 1140085..1140630 FT /note="HMMPfam hit to PF01121, Dephospho-CoA kinase" FT misc_feature 1140103..1140126 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1140265..1140354 FT /note="ScanRegExp hit to PS01294, Dephospho-CoA kinase FT signature." FT misc_feature 1140304..1140369 FT /note="Predicted helix-turn-helix motif with score 1411 FT (+3.99 SD) at aa 84-105, sequence ISEEKTAQLNSITHPAIRRQIR" FT CDS 1140904..1142103 FT /transl_table=11 FT /locus_tag="DIP1153" FT /product="Putative coenzyme PQQ synthesis related protein" FT /note="Similar to Archaeoglobus fulgidus coenzyme PQQ FT synthesis protein AF2413 SWALL:O30258 (EMBL:AE001109) (375 FT aa) fasta scores: E(): 1.1e-54, 40.79% id in 375 aa, and to FT Methylobacterium extorquens coenzyme PQQ synthesis protein FT E PqqE SWALL:PQQE_METEX (SWALL:P71517) (384 aa) fasta FT scores: E(): 1e-05, 24.67% id in 381 aa" FT /protein_id="CAE49673.1" FT /translation="MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHCRA FT DAQHEPHPEQLTTEQGKQLLSDLASYERPKPLVVLTGGDPFERQDLEELVDYGTSLGLN FT VSLSPSVTPRLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFSGTFDTTVKRAADI FT LQAGFRLQINSTLTKSNIREAPALLKTVMGMGAKMWYVFFLVPTGRGAALNALNPQERE FT DVLHWLADVSDRIAIKTTEAPQYRRVVIQQRLRKEGQLDKYQGGELYRYLTQKTTELLG FT AHPVQPRRPRPPMAVNSGSGFVFIDHIGDVYPSGFLPIHCGNVKQASIKTIYSQSPTFQ FT ALRDPNHWHGKCSVCEFHDVCGGSRSTAYALTGDVRASDPTCVYMPQPWLDAGHSGVED FT " FT misc_feature 1141105..1141854 FT /note="HMMPfam hit to PF01444, moaA / nifB / pqqE family" FT CDS 1142204..1144249 FT /transl_table=11 FT /gene="uvrB" FT /locus_tag="DIP1154" FT /product="excinuclease ABC subunit B" FT /note="Similar to Mycobacterium tuberculosis excinuclease FT ABC subunit B UvrB or Rv1633 or MT1669 or MTCY01B2.25 FT SWALL:UVRB_MYCTU (SWALL:O06150) (698 aa) fasta scores: E(): FT 2e-179, 76.61% id in 697 aa, and to Bacillus subtilis FT excinuclease ABC subunit B UvrB or DinA or Uvr FT SWALL:UVRB_BACSU (SWALL:P37954) (661 aa) fasta scores: E(): FT 5.5e-143, 60.15% id in 665 aa, and to Escherichia coli FT excinuclease ABC subunit B UvrB or B0779 or Z0998 or FT ECS0857 SWALL:UVRB_ECOLI (SWALL:P07025) (673 aa) fasta FT scores: E(): 9.4e-134, 57.38% id in 664 aa" FT /protein_id="CAE49674.1" FT /translation="MGDIERTDARFEVISEYEPAGDQPAAIEELDARLSRGERDVVLLG FT ATGTGKSATAAWLIEQQQRPTLVMAPNKTLAAQLANELRQLLPNNAVEYFVSYYDYYQP FT EAYIAQTDTYIEKDSSINDDVERLRHRATSSLLSRRDVVVVSSVSCIYGLGTPQSYLDR FT SVVLRVDEEVERDRFLRLLVDIQYDRNDVGFTRGTFRVKGDTVDIIPAYEEVAVRVEFF FT GDDIDALYYIHPLTGDVIRQVDEVRIFPATHYVAGPERMAKAVEDIKAELRDRLEDLEN FT RGKLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHLDGRPAGSAPATLLDYFPEDFLT FT IIDESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSALDNRPLKWEEFEQRVGQTVYMSA FT TPGDYELAASGGEYVEQVIRPTGLVDPEIDVRPTRGQIDDLIHEIKQRTTKDERVLVTT FT LTKKMAEDLTDYLLENGIRVRYLHSDIDTLQRVELLRQLRLGEYDVLVGINLLREGLDL FT PEVSLVAILDADKEGFLRSTKSLIQTIGRAARNVSGTVIMYADKITDSMQYAIDETERR FT REKQIAYNKEHGIDPQPLRKKIADILEQVQESKAESTAPSSDAVVVSKTNTSSMPVAEL FT RSLIDDLTTQMGTAARELKFELAGRLRDEIAELKKELRGMEEIGLA" FT misc_feature 1142228..1142461 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 1142246..1143496 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 1142336..1142359 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1143380..1143877 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 1143596..1143856 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature 1144109..1144216 FT /note="HMMPfam hit to PF02151, UvrB/uvrC motif" FT /note="ProfileScan hit to PS50151, UvrB/uvrC motif." FT CDS 1144478..1144918 FT /transl_table=11 FT /locus_tag="DIP1155" FT /product="Putative stress related protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT universal stress protein family MT1672 SWALL:AAK45942 FT (EMBL:AE007031) (146 aa) fasta scores: E(): 1.4e-19, 49.31% FT id in 146 aa, and to Rhizobium meliloti hypothetical FT protein RA0598 or SMA1100 SWALL:AAK65256 (EMBL:AE007249) FT (153 aa) fasta scores: E(): 6.8e-07, 38.37% id in 86 aa" FT /protein_id="CAE49675.1" FT /translation="MSDYSTIVVGTDGSKSSMLAVERAAKIAAAMDCTLVVGCAYYENK FT EDASKTLRQDSVTVLGNDPAQQNLDKAAAVAKEIGATKIETAILPGTPVEALMAIVREH FT NADLLVVGNRGINSLTGRLLGSVPADVARQSDCDVMIVHTVS" FT misc_feature 1144478..1144663 FT /note="ScanRegExp hit to PS00430, TonB-dependent receptor FT proteins signature 1." FT misc_feature 1144484..1144906 FT /note="HMMPfam hit to PF00582, Universal stress protein FT family" FT misc_feature 1144487..1144543 FT /note="FPrintScan hit to PR01438, Universal stress protein FT signature" FT misc_feature 1144784..1144822 FT /note="FPrintScan hit to PR01438, Universal stress protein FT signature" FT misc_feature 1144838..1144906 FT /note="FPrintScan hit to PR01438, Universal stress protein FT signature" FT CDS complement(1144967..1147279) FT /transl_table=11 FT /locus_tag="DIP1156" FT /product="Putative helicase" FT /note="Similar to Streptomyces coelicolor putative helicase FT protein SCE59.11c SWALL:Q9L1U3 (EMBL:AL138851) (744 aa) FT fasta scores: E(): 5.4e-32, 34.77% id in 788 aa, and to FT Clostridium acetobutylicum superfamily I DNA helicase FT CAC1026 SWALL:AAK79002 (EMBL:AE007618) (763 aa) fasta FT scores: E(): 2e-15, 23.98% id in 788 aa" FT /protein_id="CAE49676.1" FT /translation="MIHSLFFHNNTKGTPSMKHPIDSISAEIEDEQAYVDKLFGKLDEE FT VVAANQRLNDVMLHVDPANPDAEALVRRETEYHALNEKIDRLNIAQLGLVFGRIDVTAQ FT RTDLIDNWVAGTDNVDRRYIGRMGLDDRQNDYRTLLLDWRAPLARPFYLATTAHPEGVL FT HRRHIRTQGRSVVGVDDEVLSGVSAESAHSERADVVSETALYRAMCSARTGHMHSIVET FT IQREQDDIIRDPTRGVMVVEGGPGTGKTAVALHRVAYLLYTWRDQLAKTGVLIVGPNRS FT FLDYISRVLPELGETGVVLSTVGDLYPGISGTAVEDSLAREIKGSEEMVTVLRRLVQEY FT QQIPSEPFTIKIDGLELTVTPDIVKKARTRARRSRRPHNEARPLFTEHLTELLSHQMAD FT LIGADPMGGKNLLSAADIAQLHDELLEESVVAEIVDEYWPQLTPQDTLTSLLESQNMIS FT TVAYDYDEETQEALWRQQGSPWAASDAALLDELAVIIGVPDPEKERAEQEKAWREQIKD FT AQDALEILTGSANTDLDDESDAEILSAHDVIDAETLARRQEVRDIRSTAQRAREDLAWA FT YGHVIVDEAQELTPMEWRMVMRRCPSRWMTLVGDTAQTSSPAGVDSWAEALEPFVSGRY FT VTHHLTINYRTPAEIMEWANKVLHVFAPDAVGSTALRQSGTPVRFENSDAHAIEIAQKL FT RQDDPSRLTAIIGPDSMANNEIFGVSDIKGLEYDHVVVTNPIDIVNGSPQGWQDLYVAL FT TRATQSLCIIGDLPELS" FT misc_feature complement(1145306..1145365) FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature complement(1146497..1146613) FT /note="HMMPfam hit to PF00580, UvrD/REP helicase" FT misc_feature complement(1146530..1146553) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT stem_loop complement(1147328..1147378) FT /note="Score 53: 19/20 (95%) matches, 0 gaps" FT CDS complement(1147403..1148248) FT /transl_table=11 FT /locus_tag="DIP1157" FT /product="Conserved hypothetical protein" FT /note="N-terminal region similar to Streptomyces coelicolor FT hypothetical 18.8 kDa protein SC9H11.26c SWALL:Q9KYL5 FT (EMBL:AL356592) (177 aa) fasta scores: E(): 9.8e-11, 35.13% FT id in 148 aa. Note: Possible colied-coil region at FT C-terminal domain from residue 242 till the end" FT /protein_id="CAE49677.1" FT /translation="MIRKFARPMLASVYVADGVDVVLNSQAHVEGTQTVINRLRTVVPR FT KYMKKLPEDPQVITQAVGATKVLAGSSLALGKAPRTSAAVLAAISVPTIIARHAFWETQ FT DREEKIARRQGFLTSIALLGGLAITSADTAGKPSLKWRADKAVQKASTQIQQALPTKTE FT TEKFGDQASAVASQAASTAKDLWNDATDSVSQYGQTALEYVEDNKDDWLALAQKNAVLA FT KKKAVKVAARAQERAAQAYESAEKSTGRNAKRASKKANQLQRKAEKSLNKAMKRFDSAF FT " FT CDS complement(1148433..1149080) FT /transl_table=11 FT /locus_tag="DIP1158" FT /product="Putative hydrolase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT metallo-beta-lactamase superfamily protein MT1673 FT SWALL:AAK45943 (EMBL:AE007031) (264 aa) fasta scores: E(): FT 5e-29, 45.58% id in 204 aa, and to Streptomyces coelicolor FT putative hydrolase SCC54.20 SWALL:Q9Z505 (EMBL:AL035591) FT (218 aa) fasta scores: E(): 7.2e-26, 40.55% id in 217 aa" FT /protein_id="CAE49678.1" FT /translation="MISVDTMTNASSTEGISLHHISVSDLDNNCYLLTTESDEGTQGLL FT IDAADNAPALLDLAESAGARITAVVTTHRHFDHVRALEDVLDTTKATHFASLGDSPRLP FT RSADTTLGEGDTLRWAGHNLRAHILRGHTQEGLALSIKIDGIYHLFVGDSLFPRGVGKT FT STPEEFNQLLSDVKTRLFDVYPDTAVVHPGHGKPTTLGTERPHLEQWRQRGW" FT misc_feature complement(1148499..1149014) FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily" FT RBS 1149219..1149225 FT CDS 1149234..1152095 FT /transl_table=11 FT /gene="uvrA" FT /locus_tag="DIP1159" FT /product="excinuclease ABC subunit A" FT /note="Similar to Mycobacterium tuberculosis excinuclease FT ABC subunit A UvrA or Rv1638 or MT1675 or MTCY06H11.02 FT SWALL:UVRA_MYCTU (SWALL:P94972) (972 aa) fasta scores: E(): FT 0, 71.87% id in 953 aa, and to Escherichia coli FT excinuclease ABC subunit A UvrA or DinE or B4058 FT SWALL:UVRA_ECOLI (SWALL:P07671) (940 aa) fasta scores: E(): FT 2.7e-176, 54.35% id in 953 aa" FT /protein_id="CAE49679.1" FT /translation="MVDRLVVRGAREHNLKGVDIDIPRDAMVVFTGLSGSGKSSLAFDT FT IFAEGQRRYVESLSSYARMFLGQMDKPDVDFIDGLSPAVSIDQKSTNRNPRSTVGTITE FT VYDYLRLLFSRAGTAHCPVCDAKVERQTPQQIVDQVMDMEQGLKFQVLAPVVRTRKGEF FT VDLFADLATQGYSRVRVDGSIYSLSEPPTLKKQVKHDIDVVVDRLQVKASQQQRLTDSV FT ETALKLADGVVVLEFVGLSEDDPQRFVRFSEKMSCPNGHALSVDELEPRAFSFNSPYGA FT CSACDGLGTRTVVDTELLIPDTHAPALKAIQPWNSSPNHRYFEKLIEALAKAKGFDPAT FT PFDELSEDQRDALIHGCQEEVTVRYKNRYGRVRTWTAPFEGVLGYIERKLDQADTESQK FT DRLLQYTREVACPTCHGSRLKPEILAVRLASSSHGELSIAGLSELSIQDASDFLQDLVL FT GKREEIIAGAVLKEINARLRFLLDVGLTYLTLNRAAGTLSGGEAQRIRLATQIGSGLAG FT VLYVLDEPSIGLHQRDNQRLISTLERLRDIGNTLIVVEHDEDTIRAADWLIDVGPKAGE FT YGGEIVYQGEPAGIVDCKESITGAYLSGKKVLGVPEKRRAIDPDRALKIVGAKENNLKG FT INVTIPLGVLACVTGVSGSGKSTLVNQILAKVLANELNRARTVPGRAQRVEGIDNLDKL FT VQVDQSPIGRTPRSNPATYTGVFDKVRNLFAETTEAKVRGYKPGRFSFNVKGGRCEACQ FT GDGTLKIEMNFLPDVYVPCEVCHGARYNRETLEVKYKGKNIAEVLDMPISEAAEFFEPI FT TSIHRYLKTLTEVGLGYVRLGQSATTLSGGEAQRVKLAAELQKRSNGRTVYILDEPTTG FT LHFEDIRKLMLVIQGLVDKGNSVIIIEHNLDVIKTADWVIDMGPEGGSGGGTVVAEGTP FT EQVAEVSGSYTGGFLKEVLSASK" FT misc_feature 1149327..1149350 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1150494..1150946 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 1150722..1150766 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 1150722..1150943 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 1151160..1151975 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 1151181..1151204 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1151547..1151564 FT /note="ScanRegExp hit to PS00190, Cytochrome c family FT heme-binding site signature." FT misc_feature 1151748..1151792 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 1151748..1151972 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 1152383..1152886 FT /transl_table=11 FT /gene="infC" FT /locus_tag="DIP1160" FT /product="translation initiation factor IF-3" FT /note="Similar to Mycobacterium tuberculosis translation FT initiation factor IF-3 InfC or Rv1641 or MT1679 or FT MTCY06H11.05 SWALL:IF3_MYCTU (SWALL:P94975) (201 aa) fasta FT scores: E(): 4.8e-50, 79.51% id in 166 aa, and to FT Escherichia coli translation initiation factor IF-3 InfC or FT Fit or B1718 or Z2747 or ECS2425 SWALL:IF3_ECOLI FT (SWALL:P02999) (180 aa) fasta scores: E(): 3.8e-28, 50.9% FT id in 165 aa. Note: The initiation codon is ATT (Ref: FT Butler J.S., et al.; AUU-to-AUG mutation in the initiator FT codon of the translation initiation factor IF3 abolishes FT translational autocontrol of its own gene (infC) in vivo; FT PNAS, 84:4022-4025(1987))" FT /protein_id="CAE49680.1" FT /translation="MNERIRVPEVRLVGPNGEQVGIVRIDDARKLAYEADLDLVEVAPN FT AKPPVCKIMDYGKFKYEQAQKAREARKNQQQTVVKEQKFRPKIDDHDYETKKNNVIRFL FT EKGSKVKVTIMFRGREQSRPELGFRLLERLAGDVAEYGIVESKPKQDGRNMTMVFGPAR FT KGKK" FT misc_feature 1152440..1152871 FT /note="BlastProDom hit to PD002880, PD002880" FT /note="HMMPfam hit to PF00707, Translation initiation FT factor IF-3" FT misc_feature 1152536..1152577 FT /note="ScanRegExp hit to PS00938, Initiation factor 3 FT signature." FT CDS 1152916..1153110 FT /transl_table=11 FT /gene="rpmI" FT /locus_tag="DIP1161" FT /product="50S ribosomal protein L35" FT /note="Similar to Streptomyces coelicolor 50S ribosomal FT protein L35 RpmI or SCI35.21c SWALL:RL35_STRCO FT (SWALL:O88059) (64 aa) fasta scores: E(): 1.1e-10, 58.06% FT id in 62 aa, and to Bacillus subtilis 50S ribosomal protein FT L35 RpmI SWALL:RL35_BACSU (SWALL:P55874) (65 aa) fasta FT scores: E(): 1.5e-07, 50% id in 60 aa" FT /protein_id="CAE49681.1" FT /translation="MKQKTHKGTAKRVKITGSGKLRREQANRRHLLEGKPSKRTRRLKG FT TEDVAKADTKRIKRLLGKA" FT misc_feature 1152919..1152972 FT /note="FPrintScan hit to PR00064, Ribosomal protein L35 FT signature" FT misc_feature 1152925..1153098 FT /note="BlastProDom hit to PD003417, PD003417" FT /note="HMMPfam hit to PF01632, Ribosomal protein L35" FT misc_feature 1152973..1153017 FT /note="FPrintScan hit to PR00064, Ribosomal protein L35 FT signature" FT misc_feature 1153018..1153074 FT /note="FPrintScan hit to PR00064, Ribosomal protein L35 FT signature" FT CDS 1153172..1153555 FT /transl_table=11 FT /gene="rplT" FT /locus_tag="DIP1162" FT /product="50S ribosomal protein L20" FT /note="Similar to Mycobacterium tuberculosis 50S ribosomal FT protein L20 RplT or Rv1643 or MT1681 or MTCY06H11.07 FT SWALL:RL20_MYCTU (SWALL:P94977) (129 aa) fasta scores: E(): FT 7.7e-36, 75.8% id in 124 aa, and to Escherichia coli 50S FT ribosomal protein L20 RplT or PdzA or B1716 or Z2745 or FT ECS2423 or STM1336 or STY1775 SWALL:RL20_ECOLI FT (SWALL:P02421) (117 aa) fasta scores: E(): 5.5e-23, 57.75% FT id in 116 aa" FT /protein_id="CAE49682.1" FT /translation="MARVKRSLNAKKKRREILKSAKGYRGQRSRLYRKAKEQWLHSMTY FT AYRDRRARKSEFRKLWITRINAAARMNDITYNRLIQGLRLAEIEVDRKVLADLAVNDFA FT AFSAICEAAKAALPADVNAPKAA" FT misc_feature 1153175..1153498 FT /note="HMMPfam hit to PF00453, Ribosomal protein L20" FT misc_feature 1153178..1153498 FT /note="BlastProDom hit to PD002389, PD002389" FT misc_feature 1153205..1153294 FT /note="FPrintScan hit to PR00062, Ribosomal protein L20 FT signature" FT misc_feature 1153295..1153384 FT /note="FPrintScan hit to PR00062, Ribosomal protein L20 FT signature" FT misc_feature 1153331..1153381 FT /note="ScanRegExp hit to PS00937, Ribosomal protein L20 FT signature." FT misc_feature 1153394..1153474 FT /note="FPrintScan hit to PR00062, Ribosomal protein L20 FT signature" FT CDS complement(1153805..1154350) FT /transl_table=11 FT /locus_tag="DIP1163" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49683.1" FT /translation="MIKATYGVLARVFAIVLIVVGAAAIFGGTYAHGFVTEQLKQERIT FT MPTQEGIDKLEDQASKEILQQWVGQDLTTGPQAKAFADNYIWQHMMASSGGKTFQEFGA FT VIAQAKKDGKSADEIAALQKTRDSLFQGNTLRGILLSAYGWWLVGSIALWAGIGLIILG FT LILATLGFITWSAKKTQV" FT misc_feature complement(order(1153832..1153897,1154264..1154329)) FT /note="2 probable transmembrane helices predicted for FT DIP1163 by TMHMM2.0" FT misc_feature complement(1154252..1154350) FT /note="Signal peptide predicted for DIP1163 by SignalP 2.0 FT HMM (Signal peptide probability 0.941) with cleavage site FT probability 0.440 between residues 33 and 34" FT CDS 1154597..1155415 FT /transl_table=11 FT /gene="tsnR" FT /locus_tag="DIP1164" FT /product="Putative rRNA methyltransferase" FT /note="Similar to Mycobacterium tuberculosis TsnR or Rv1644 FT or MT1682 or MTCY06H11.08 SWALL:AAK45951 (EMBL:Z85982) (260 FT aa) fasta scores: E(): 2.4e-45, 52.85% id in 263 aa, and to FT Mycobacterium leprae putative rRNA methyltransferase TsnR FT or ML1397 SWALL:Q9CC19 (EMBL:AL583921) (259 aa) fasta FT scores: E(): 6.7e-45, 52.89% id in 259 aa, and to Bacillus FT halodurans rRNA methylase BH3112 SWALL:Q9K894 FT (EMBL:AP001517) (251 aa) fasta scores: E(): 3.2e-17, 35.24% FT id in 244 aa" FT /protein_id="CAE49684.1" FT /translation="MPIDFSSPFTERTPRVVNAAKLLRSAGRKKVDRFLAEGENSVEAA FT VATGAATDLFVTEKAAERFEAIVTAAGHMGVFVHPITDRAAKSLSDTMTTTGIFAVCLP FT VLWSAREALKGNPSLVCVAVETGEPGNAGTLVRVADAMGADCVIFAGTTVDPQSPKAVR FT ASAGSLFHIPVVREPDMQKVWQILRARNVQMLATAAQGEINLDTAGELLEKPTAWLMGN FT EAHGLNDEALSAADHSVRIPIRGRAESLNLATAASICMYESSKSQAHKDN" FT misc_feature 1154948..1155379 FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase family" FT misc_feature 1154960..1155391 FT /note="BlastProDom hit to PD001243, PD001243" FT CDS 1155546..1156601 FT /transl_table=11 FT /gene="pheS" FT /locus_tag="DIP1165" FT /product="phenylalanyl-tRNA synthetase alpha chain" FT /EC_number="6.1.1.20" FT /note="Similar to Mycobacterium tuberculosis FT phenylalanyl-tRNA synthetase alpha chain PheS or Rv1649 or FT MT1687 or MTCY06H11.14 SWALL:SYFA_MYCTU (SWALL:P94984) (341 FT aa) fasta scores: E(): 6.6e-87, 62.35% id in 340 aa, and to FT Bacillus subtilis phenylalanyl-tRNA synthetase alpha chain FT PheS SWALL:SYFA_BACSU (SWALL:P17921) (344 aa) fasta scores: FT E(): 2.6e-54, 44.02% id in 343 aa, and to Escherichia coli FT phenylalanyl-tRNA synthetase alpha chain PheS or B1714 FT SWALL:SYFA_ECOLI (SWALL:P08312) (327 aa) fasta scores: E(): FT 7.1e-52, 44.71% id in 331 aa" FT /protein_id="CAE49685.1" FT /translation="MSEQPDYPAVELTEEGLAQAADAAIRAFGVASNLDELNIARRDHL FT GDAAPIPQARRSLGTLPKDQRKDAGRLVNMARGRLEKHFAQVKEVLEAKHLEEMLKAER FT VDVTVPTTRHQTGALHPITTLSEKIADIFVAMGYEVADGPEIEAEYFNFDSLNFIPDHP FT ARTLQDTFHVGEPGSSQVLRTHTSPVQMRTMLSREVPIYVVCPGRVFRTDELDATHTPV FT FHQVEGLAVDKGLTMAHLRGTLDHLAKTLFGPETKTRMRANYFPFTEPSAEVDVWFPNK FT KGGAGWIEWGGCGMVNPNVLKAAGIDPEVYSGFAFGMGLERTLQFRNGLTDMRDMVEGD FT VRFTLPFGVQA" FT misc_feature 1155618..1155848 FT /note="HMMPfam hit to PF02912, Aminoacyl tRNA synthetase FT class II, N-terminal domain" FT misc_feature 1155903..1156547 FT /note="HMMPfam hit to PF01409, tRNA synthetases class II FT (F)" FT misc_feature 1156173..1156226 FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT CDS 1156643..1159153 FT /transl_table=11 FT /gene="pheT" FT /locus_tag="DIP1166" FT /product="phenylalanyl-tRNA synthetase beta chain" FT /EC_number="6.1.1.20" FT /note="Similar to Mycobacterium tuberculosis FT phenylalanyl-tRNA synthetase beta chain PheT or Rv1650 or FT MT1688 or MTCY06H11.15 SWALL:SYFB_MYCTU (SWALL:P94985) (831 FT aa) fasta scores: E(): 4.2e-156, 49.64% id in 844 aa, and FT to Bacillus subtilis phenylalanyl-tRNA synthetase beta FT chain PheT SWALL:SYFB_BACSU (SWALL:P17922) (804 aa) fasta FT scores: E(): 1.8e-53, 30.69% id in 847 aa" FT /protein_id="CAE49686.1" FT /translation="MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPE FT TTGPLVIGRVETIEELEGFKKPIRHCFVNVGDANGTGELQSIVCGARNFQEGSYVVVSL FT PGAVLPGNFAISARETYGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDARSIV FT GLDDTVFDVNITPDRGYALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGE FT LIKVDLRPETQARRFGVRKVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLL FT GQPMHAFDANLIKGGLVVRNALEGESFETLDHVKRTLSAEDVVISDDTGIQSLAGVMGG FT TTSEISDETTDVFFEAANWHPITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACA FT LLVSIAGGSVESARTLIGSAPSMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEV FT DGDDLLVTPPTWRPDMTMSADLVEEVLRLEGLEDIPTIVPLAPVGSGLSPAQLRRRAIG FT HALAYSGYAEILPTPFIRNDTFDVWGLAADDERRSVVTVQNPLDAEYGVLATTLLPSML FT EAVTRNVSRGQTSVNLFGLQQVSFKRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHV FT ATVGAGFMELEGPWGHGRTYSFADAIESARVVARAAGVELNVENVEMLPWHPGRCAALK FT AGDHIVGYAGELHPQIVEALNLPARTCAMELDVSALPLKESFPAPVLSAFPVLHQDLAL FT VVDESVPAESVRKVIEDAAGELLEKVELFDVYRSEALGAEKKSLAFSLEFRAQDRTLTD FT DECSEGRLAAAGRAAELFGATMRA" FT misc_feature 1157417..1157452 FT /note="ScanRegExp hit to PS00070, Aldehyde dehydrogenases FT cysteine active site." FT CDS 1159280..1160323 FT /transl_table=11 FT /gene="argC" FT /locus_tag="DIP1167" FT /product="N-acetyl-gamma-glutamyl-phosphate reductase" FT /EC_number="1.2.1.38" FT /note="Similar to Corynebacterium glutamicum FT N-acetyl-gamma-glutamyl-phosphate reductase ArgC FT SWALL:ARGC_CORGL (SWALL:Q59279) (347 aa) fasta scores: E(): FT 1.9e-91, 69.45% id in 347 aa, and to Bacillus subtilis FT N-acetyl-gamma-glutamyl-phosphate reductase ArgC FT SWALL:ARGC_BACSU (SWALL:P23715) (346 aa) fasta scores: E(): FT 1.3e-38, 39.3% id in 346 aa" FT /protein_id="CAE49687.1" FT /translation="MNIKVAIVGASGYAGGEILRLLLQHPLYLSGQLSIGALMGSSTVG FT QTVSELMPHLPELSDRVVEPTDVETLKSHDVVFLALPHGFSAEIAQQLPAEITVIDCAA FT DFRLKDQKDWDAYYGGKHAGSWPYGIPEMPGHRDLIASSKRIAVPGCFPTGATLALLPA FT IAAHIIEPDVSVVSITGVSGAGKKASVAMLGAETMGSLKAYNVAGKHRHTPEISQNLSE FT YADQKIVVSFTPVLAPLPRGILTTATAKLTSGITLDEIREIYLNAYENEPFVHILPSGQ FT QPQTQAVVGSNMCHIQVDADDNSKKLVVTSAIDNLTKGTAGAAVQCMNLSLGVSETSGL FT PCGGVAP" FT misc_feature 1159283..1159720 FT /note="HMMPfam hit to PF01118, Semialdehyde dehydrogenase, FT NAD binding domain" FT misc_feature 1159652..1160299 FT /note="BlastProDom hit to PD003765, PD003765" FT misc_feature 1159715..1159765 FT /note="ScanRegExp hit to PS01224, FT N-acetyl-gamma-glutamyl-phosphate reductase active site." FT misc_feature 1159745..1160233 FT /note="HMMPfam hit to PF02774, Semialdehyde dehydrogenase, FT dimerisation domain" FT CDS 1160398..1161558 FT /transl_table=11 FT /gene="argJ" FT /locus_tag="DIP1168" FT /product="glutamate N-acetyltransferase" FT /EC_number="2.3.1.35" FT /note="Similar to Corynebacterium glutamicum glutamate FT N-acetyltransferase ArgJ SWALL:ARGJ_CORGL (SWALL:Q59280) FT (388 aa) fasta scores: E(): 5.5e-103, 71.9% id in 388 aa, FT and to Bacillus subtilis arginine biosynthesis bifunctional FT protein [includes: glutamate N-acetyltransferase; amino FT acid acetytransferase] ArgJ SWALL:ARGJ_BACSU (SWALL:P36843) FT (406 aa) fasta scores: E(): 8.6e-40, 36.09% id in 399 aa" FT /protein_id="CAE49688.1" FT /translation="MSSRGVTAPQGFVAAGATAGIKPSGNKDMALVVNQGPEFVGAAVF FT TRNRVVASPVKYTKKAVANGTLRAVLYNSGNANACNGVQGDKDVHEIVDYLASKLKVDP FT LDIAACSTGLIGEPLPVTMIKAGVDKLIPALGDNGGEAADSIMTTDTVAKETVVKCNGW FT TLGGMGKGVGMMAPSLATMLVCLTTDACVTQAQAHAALSKACDVTFNTLDIDGSTSTND FT TVILLANGASGITPTESEFNDAVLQACADIADQLQADAEGVTKRVRITVTGTTTDSQAL FT NAARTLGRDNLFKCAMFGSDPNWGRVLAAVGMADADMDPDNISVYFNDQPVCLQSGGTP FT EARQVDLSGIDIDVRVDLGTGGPGKAFVRTTDLSHQYVEINSAYSS" FT misc_feature 1160413..1161555 FT /note="BlastProDom hit to PD004193, PD004193" FT misc_feature 1160431..1161555 FT /note="HMMPfam hit to PF01960, ArgJ family" FT misc_feature 1161442..1161483 FT /note="ScanRegExp hit to PS01039, Bacterial extracellular FT solute-binding proteins, family 3 signature." FT CDS 1161595..1162527 FT /transl_table=11 FT /gene="argB" FT /locus_tag="DIP1169" FT /product="acetylglutamate kinase" FT /EC_number="2.7.2.8" FT /note="Similar to Corynebacterium glutamicum FT acetylglutamate kinase ArgB SWALL:ARGB_CORGL (SWALL:Q59281) FT (294 aa) fasta scores: E(): 2.4e-81, 77.5% id in 289 aa, FT and to Bacillus subtilis acetylglutamate kinase ArgB FT SWALL:ARGB_BACSU (SWALL:P36840) (258 aa) fasta scores: E(): FT 2.2e-23, 36.88% id in 244 aa" FT /protein_id="CAE49689.1" FT /translation="MTATIDNLTSRERATVLADALPWLQRYRDKIVVVKYGGNAMVDEE FT LKAAFAADMVFLRTVGVRPVVVHGGGPQISQMLQRLGIEGEFKGGFRVTSPEVLEIVRM FT VLFGQVGRDLVGLINSHGPYAVGTSGEDAGLFRAEKRLVEIDGELTDIGQVGNITAVNA FT SSLMGIIDAGRIPVVSTIAPGDDGSVYNINADTAAGALAAALSAERLLILTNVEGLYTD FT WPNKDSLVSVIGAERLREKLSALGSGMIPKMESCVDAVIHGVSAAHVIDGRVAHSVLLE FT LLTSGGVGTMVVPDTEMTNGTVYRKDNHV" FT misc_feature 1161682..1162407 FT /note="HMMPfam hit to PF00696, Amino acid kinase family" FT CDS 1162520..1163761 FT /transl_table=11 FT /gene="argD" FT /locus_tag="DIP1170" FT /product="acetylornithine aminotransferase" FT /EC_number="2.6.1.11" FT /note="Similar to Corynebacterium glutamicum FT acetylornithine aminotransferase ArgD SWALL:ARGD_CORGL FT (SWALL:Q59282) (389 aa) fasta scores: E(): 2.9e-98, 65.21% FT id in 391 aa, and to Mycobacterium tuberculosis FT acetylornithine aminotransferase ArgD or Rv1655 or MT1693 FT or MTCY06H11.20 SWALL:ARGD_MYCTU (SWALL:P94990) (400 aa) FT fasta scores: E(): 5.2e-74, 50.12% id in 405 aa" FT /protein_id="CAE49690.1" FT /translation="MSKNAANTDSQSSETQWADVIMNTYGTPPLTITGGNGATLTDSVG FT KTYIDLLAGIAVNSLGHAHPAIVEAVTEQISNFAHVSNLFGSRPVIDTAARLIRRFAEE FT TTDSTQTAHDTRVFFCNSGTEANEAAFKLARMTGKNRILAAQHGFHGRTMGALAMTGQP FT DKQMPFYPLPAGVEFYPYGDIDYLRKLVQINSTDVAAIILEPIQGETGVIPAPDGFLSA FT VRGLCNEFDILMIVDEVQTGIGRTGDFFAFQHETGVIPDVVTMAKGLGGGLPIGACLAT FT GKAKDLLGPGKHGTTFGGNPVSCAAAGAVLRTIDDDFLENVQRKSHKLVKRMSRLPLVE FT SIRGRGLMLGVLLSEPVAKECVKLALEHGLIVNAPSASVLRLTPPLVISDAEIHESIER FT LSIVLTKIKKKECH" FT misc_feature 1162577..1163743 FT /note="HMMPfam hit to PF00202, Aminotransferase class-III" FT misc_feature 1163219..1163335 FT /note="ScanRegExp hit to PS00600, Aminotransferases FT class-III pyridoxal-phosphate attachment site." FT CDS 1163790..1164749 FT /transl_table=11 FT /gene="argF" FT /locus_tag="DIP1171" FT /product="ornithine carbamoyltransferase, anabolic" FT /EC_number="2.1.3.3" FT /note="Similar to Corynebacterium glutamicum ornithine FT carbamoyltransferase, anabolic ArgF SWALL:OTCA_CORGL FT (SWALL:Q59283) (319 aa) fasta scores: E(): 3.4e-97, 77.11% FT id in 319 aa, and to Bacillus subtilis ornithine FT carbamoyltransferase, anabolic ArgF SWALL:OTCA_BACSU FT (SWALL:P18186) (319 aa) fasta scores: E(): 4.2e-45, 45.19% FT id in 312 aa" FT /protein_id="CAE49691.1" FT /translation="MSTQTRVRHFLADDDLTPAQQREVLELASELKQHPYSRKTYDGPQ FT SVAVLFDKTSTRTRFSFDAGISQLGGHAIVVDSGKSQMGKGETFQDTGAVLSRFVSTIV FT WRTGSHQNLLDMAETATVPIVNALSDDLHPCQILADLQTCIEHLCPQEGVPGLKGLKAV FT YLGDGDNNMANSYMIGFATAGLDITIIAPKKFQPKQEFVDRAEKRASETGAIVSVTADI FT SAVSDADVVITDTWVSMGMENDGIDRRTPFLPYQVNDEVMALAKKSAIFLHCLPAYRGS FT EVAASVIDGPQSVVFDEAENRLHAQKALLVWLMENQPR" FT misc_feature 1163811..1164233 FT /note="HMMPfam hit to PF02729, Aspartate/ornithine FT carbamoyltransferase, carbamoyl-P binding domain" FT misc_feature 1163910..1163978 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature 1163934..1163978 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 1163940..1163963 FT /note="ScanRegExp hit to PS00097, Aspartate and ornithine FT carbamoyltransferases signature." FT misc_feature 1163940..1163999 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 1164024..1164053 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature 1164033..1164074 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 1164153..1164197 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 1164183..1164236 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature 1164186..1164221 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 1164258..1164731 FT /note="HMMPfam hit to PF00185, Aspartate/ornithine FT carbamoyltransferase, Asp/Orn binding domain" FT misc_feature 1164480..1164512 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 1164588..1164617 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 1164624..1164695 FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature 1164666..1164701 FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature 1164672..1164716 FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT CDS 1164856..1165347 FT /transl_table=11 FT /gene="argR" FT /locus_tag="DIP1172" FT /product="Arginine repressor" FT /note="Similar to Corynebacterium glutamicum arginine FT repressor ArgR SWALL:ARGR_CORGL (SWALL:O85175) (171 aa) FT fasta scores: E(): 2.6e-39, 71.33% id in 157 aa, and to FT Streptomyces clavuligerus arginine repressor ArgR FT SWALL:ARGR_STRCL (SWALL:P95721) (178 aa) fasta scores: E(): FT 4.5e-20, 45.16% id in 155 aa" FT /protein_id="CAE49692.1" FT /translation="MSNGPITRTVRQALILDLLEQNQVSSQMQLSELLKQRGVDITQGT FT LSRDLDELGAKKIRPNGGRAFYAVGTSEDAASSTTAGTREKLRKMLDDLLVSVDHSGNI FT AVLRTPPAGAPFLASFIDRVGMDEVVGTIAGDDTVFVLARDPMTGKELGEFLSQRRTSL FT " FT misc_feature 1164865..1165092 FT /note="HMMPfam hit to PF01316, Arginine repressor, DNA FT binding domain" FT misc_feature 1164868..1165293 FT /note="BlastProDom hit to PD007402, PD007402" FT misc_feature 1164931..1164972 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT misc_feature 1164979..1165026 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT misc_feature 1165123..1165332 FT /note="HMMPfam hit to PF02863, Arginine repressor, FT C-terminal domain" FT misc_feature 1165150..1165191 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT misc_feature 1165240..1165287 FT /note="FPrintScan hit to PR01467, Bacterial arginine FT repressor signature" FT CDS 1165505..1166704 FT /transl_table=11 FT /gene="argG" FT /locus_tag="DIP1173" FT /product="argininosuccinate synthase" FT /EC_number="6.3.4.5" FT /note="Similar to Corynebacterium glutamicum FT argininosuccinate synthase ArgG SWALL:ASSY_CORGL FT (SWALL:O85176) (401 aa) fasta scores: E(): 7.6e-136, 84.17% FT id in 398 aa, and to Bacillus subtilis argininosuccinate FT synthase ArgG SWALL:ASSY_BACSU (SWALL:O34347) (403 aa) FT fasta scores: E(): 4e-76, 52.13% id in 399 aa" FT /protein_id="CAE49693.1" FT /translation="MTNRVVLAYSGGLDTSVAIPYLAKMTGGEVVAVSLDLGQGGEDME FT SVRQRALDCGAVESIVIDAKDEFANDYCLPTIKANGMYMKQYPLVSAISRPLIVKHLVE FT AAKKHGGTHVSHGCTGKGNDQVRFEVGFRNLAPELQIIAPARDYAWTRDKAIAFAEEIN FT LPIEQSKKSPFSIDQNVWGRAVETGFLEDLWNPPTKDLYSYTEDPALGNAPDEIIISFK FT AGVPVAIDGRPVTVLEAIEEMNRRAGAQGIGRLDMVEDRLVGIKSREVYEAPGAIALIT FT AHQAMEDVTIERELARYKRGIDARWSEEVYDGLWYAPLKRSLDAFIENTQEHVTGDIRM FT VMHAGKCTVNGRRSEHSLYDFDLATYDTGDTFDQTLAKGFVELHGLSSKISNKRDREAQ FT " FT misc_feature 1165520..1166686 FT /note="BlastProDom hit to PD003544, PD003544" FT /note="HMMPfam hit to PF00764, Arginosuccinate synthase" FT misc_feature 1165526..1165552 FT /note="ScanRegExp hit to PS00564, Argininosuccinate FT synthase signature 1." FT misc_feature 1165853..1165888 FT /note="ScanRegExp hit to PS00565, Argininosuccinate FT synthase signature 2." FT CDS 1166704..1168137 FT /transl_table=11 FT /gene="argH" FT /locus_tag="DIP1174" FT /product="argininosuccinate lyase" FT /EC_number="4.3.2.1" FT /note="Similar to Mycobacterium tuberculosis FT argininosuccinate lyase ArgH or Rv1659 or MT1697 or FT MTCY06H11.24 SWALL:ARLY_MYCTU (SWALL:P94994) (470 aa) fasta FT scores: E(): 3.7e-128, 70.41% id in 463 aa, and to FT Corynebacterium glutamicum argininosuccinate lyase ArgH FT SWALL:ARLY_CORGL (SWALL:O88101) (478 aa) fasta scores: E(): FT 1.5e-112, 65.64% id in 489 aa" FT /protein_id="CAE49694.1" FT /translation="MQKHGTNEGALWGGRFSGGPSEAMFALSVSTHFDWVLAPYDVLAS FT KAHARVLNKAKLLSDSDLETMLGGLDKLGKAVASGEFKPLPTDEDVHGAMERGLIDIVG FT PEVGGRLRAGRSRNDQVATLFRMWVRDAVRSVALQVTELVDALAYQATQHPRAIMPGKT FT HSQAAQPVLLAHQLLAHAQPLLRDIDRIRDLDKRLAISPYGSGALAGSSLHLDPEAIAQ FT ELGFDSACDNSIDGTSSRDFAAETAYVLAQIAIDMSRLAEEIIYWCTPEYGYVTLSDAW FT STGSSIMPQKKNPDVAELTRGKTGRLIGNLSGLLATLKAQPLAYNRDLQEDKEPIVDSF FT AQLNLLLPAMTGLVSTLTFHEDRLLSLAPAGFTLATDLAEWMVRQGVPFREAHEASGAC FT VRIAESRGVGLDELTDDELASVDVRLTPEVRTVLTVEGAVASRATRGGTAGVRVEEQRS FT RVESTSQSFKEWALTPVRK" FT misc_feature 1166743..1168023 FT /note="HMMPfam hit to PF00206, Lyase" FT misc_feature 1167031..1167099 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 1167034..1167090 FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 1167154..1167216 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 1167169..1167219 FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 1167307..1167357 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 1167421..1167495 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature 1167421..1167504 FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 1167553..1167582 FT /note="ScanRegExp hit to PS00163, Fumarate lyases FT signature." FT misc_feature 1167553..1167603 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature 1167592..1167615 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1167658..1167717 FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT CDS 1168201..1168413 FT /transl_table=11 FT /locus_tag="DIP1175" FT /product="Conserved hypothetical protein" FT /note="Similar to Caulobacter crescentus hypothetical FT protein CC0108 SWALL:Q9ABW2 (EMBL:AE005685) (65 aa) fasta FT scores: E(): 9.4e-08, 44.64% id in 56 aa, and to FT Mycobacterium tuberculosis hypothetical 8.3 kDa protein FT Rv1684 or MTCI125.06 SWALL:O33186 (EMBL:Z98268) (74 aa) FT fasta scores: E(): 2.1e-07, 57.69% id in 52 aa. Note: Two FT possible alternative start codons at residues 8 or 11" FT /protein_id="CAE49695.1" FT /translation="MPFEIGTMPIMSIDPKLLEVLACPQDKGPLKYLEAEQVLVNERLE FT IAYRIDDGIPVMLVDESIAWPPAEK" FT CDS 1168427..1169689 FT /transl_table=11 FT /gene="tyrS" FT /locus_tag="DIP1176" FT /product="tyrosyl-tRNA synthetase" FT /EC_number="6.1.1.1" FT /note="Similar to Mycobacterium tuberculosis tyrosyl-tRNA FT synthetase TyrS or Rv1689 or MT1728 or MTCI125.11 FT SWALL:SYY_MYCTU (SWALL:O33191) (424 aa) fasta scores: E(): FT 8.5e-103, 62.67% id in 418 aa, and to Bacillus subtilis FT tyrosyl-tRNA synthetase 1 TyrS SWALL:SYY1_BACSU FT (SWALL:P22326) (422 aa) fasta scores: E(): 1.3e-69, 45.49% FT id in 422 aa" FT /protein_id="CAE49696.1" FT /translation="MNIIDELQWRGLINQSTDIDALREACEKPITLYCGFDPTGDSLHA FT GHLVPMIMLRRFQEAGHRPITLAGGATGFIGDPRDVGERSMLSQDTIEHNLESIKKQLR FT SFVRFDGDSPAIMVNNADWTMSMSVVDFLRDVGKNFSLNTMLDRETVKRRLETDGISYT FT EFSYMLLQANDFVQLNREYDCVLQIGGGDQWGNIVSGVDLNRRVSGTKTHALTVPLVTD FT AQGQKFGKSTGGGKLWLDPEKTSAYSWYQYFLNAGDSVVIDYLRWFTFLTQEEIAELET FT EVRERPHLRAAQRRLAQEMTDLVHGHDATVSVELAAQALFGRASLQDLDEATLDGALSE FT TVIFEVPAGESPTIIDLLIGAGLVDSKGAARRTIKEGGAYVNNERIESEDWQPTDDVLL FT HGAWLVLRKGKKNFAGVKYSA" FT misc_feature 1168505..1169392 FT /note="HMMPfam hit to PF00579, tRNA synthetases class I (W FT and Y)" FT misc_feature 1168538..1168570 FT /note="ScanRegExp hit to PS00178, Aminoacyl-transfer RNA FT synthetases class-I signature." FT misc_feature 1168550..1168618 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT misc_feature 1168901..1168948 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT misc_feature 1168964..1169032 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT misc_feature 1169063..1169101 FT /note="FPrintScan hit to PR01040, Tyrosyl-tRNA synthetase FT signature" FT rRNA 1170343..1171734 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT /note="EMBL:X82059" FT rRNA 1172194..1175278 FT /gene="23S rRNA" FT /product="possible 23S ribosomal RNA" FT rRNA 1175418..1175538 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT /note="EMBL:X55255" FT CDS 1175639..1176715 FT /transl_table=11 FT /locus_tag="DIP1177" FT /product="Conserved hypothetical protein" FT /note="C-terminal region similar to Mycobacterium FT tuberculosis CDC1551 conserved hypothetical protein MT1730 FT SWALL:AAK45999 (EMBL:AE007035) (250 aa) fasta scores: E(): FT 4e-32, 47.73% id in 243 aa, and to Streptomyces coelicolor FT hypothetical 22.8 kDa protein SCI51.30c SWALL:Q9S210 FT (EMBL:AL109848) (210 aa) fasta scores: E(): 3.1e-24, 49.17% FT id in 181 aa" FT /protein_id="CAE49699.1" FT /translation="MADSSSRSSHDGPRRSNEGRPRGGSYGKKRSEGGKPRRFGNQTSE FT SRRGQGHGKRWEKQDGDRRSYRGDSANSQRRHDRDGGEWKRGDRKDYHSDRGNRFESKG FT QKRQHSQRGGSDRDKHFNGPMRSGYREERITKRLNEPALPADIDVRDLDPMVLQDLKVL FT AKDNADAVAKHMIMAAVWMSEDPELALKHARAAKDRAGRVAIARETCGIAAYHAGEWKE FT ALSELRAARRMSGGPGLIAVMADCERGLGRPEKAIELARNEDAKHLDHETRIELAIVVA FT GARLDLGQPESAVATLESMNPKENASGLEAARLSYAYADALLQAGRKEDANRWFTICKE FT QDIDETTDVVDRLESLAH" FT CDS 1176792..1177748 FT /transl_table=11 FT /locus_tag="DIP1178" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT1731 SWALL:AAK46000 FT (EMBL:AE007035) (353 aa) fasta scores: E(): 1e-33, 41.06% FT id in 302 aa, and to Streptomyces coelicolor hypothetical FT 35.2 kDa protein SCI51.28c SWALL:Q9S212 (EMBL:AL109848) FT (343 aa) fasta scores: E(): 4e-32, 39.4% id in 302 aa" FT /protein_id="CAE49701.1" FT /translation="MLFDLDGTVWEGGRALPFAVDSINQVNLPLMYVTNNASRGPEVVA FT SLLSDMGIFTQPEQVLTSAQAAIDLALKEVPVGSNVLVLGTDSFKSLAAEAGYMVVNSA FT DMEPVAVFHGHNPATSWTELSEAALAIRCGAKYYASNLDTTLPSERGLCVGNGSMVAAV FT VSATGVQPVSAGKPEAAMFHVAAEKLASERPLAVGDRLNTDIAGGVAAGFDTLHLLTGV FT SQHWALVHAIESERPTLIAEDLRALSSDRSVLMPQLQGDFNAYLQGTEIVLNGGSTAST FT STEALRSVLSVAWQSAEFGGTVKPVSEHAIRCMSEWR" FT misc_feature 1176792..1177454 FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT CDS 1177766..1177927 FT /transl_table=11 FT /locus_tag="DIP1179" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49702.1" FT /translation="MEIPKPYDPQNDSLSPSQIASDISELLAQNPNNLHDEAQLLTRAH FT SLLHDALS" FT CDS 1177969..1178790 FT /transl_table=11 FT /locus_tag="DIP1180" FT /product="Putative cytotoxin/hemolysin" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT cytotoxin/hemolysin MT1733 SWALL:AAK46002 (EMBL:AE007035) FT (268 aa) fasta scores: E(): 2.2e-53, 56.56% id in 274 aa, FT and to Caulobacter crescentus hemolysin A CC1324 FT SWALL:Q9A8M9 (EMBL:AE005808) (243 aa) fasta scores: E(): FT 1.2e-29, 42.27% id in 246 aa" FT /protein_id="CAE49703.1" FT /translation="MQSRKRLDAELVRRKIARSREQAVEMIKDGRVHVQGFVAKKPATQ FT VTPEASIRVEDAGLDDWASRGAHKLLGALAEFKSKGLNVSGRRALDAGASTGGFTDVLL FT RESASEVVAVDVGYGQLIWRLQNDARVKVLDRTNIRNLSLEITDGPCDLMVGDLSFISL FT KLTLPAIAACMSDGADLLPMVKPQFEVGKERLGHGGVVRDPKLRAEVTEDIALFAQQLG FT LSFVDVVASPLPGPSGNVEYFLWLKKDSGRSAKGLHEIHEKVAEAVQKGPQ" FT misc_feature 1177981..1178124 FT /note="HMMPfam hit to PF01479, S4 domain" FT misc_feature 1177981..1178157 FT /note="HMMSmart hit to SM00363, S4 RNA-binding domain" FT misc_feature 1178152..1178718 FT /note="HMMPfam hit to PF01728, FtsJ-like methyltransferase" FT CDS 1178790..1179743 FT /transl_table=11 FT /gene="ppnK" FT /locus_tag="DIP1181" FT /product="inorganic polyphosphate/ATP-NAD kinase" FT /EC_number="2.7.1.23" FT /note="Similar to Mycobacterium tuberculosis inorganic FT polyphosphate/ATP-NAD kinase PpnK or Rv1695 or MT1734 or FT MTCI125.17 SWALL:PPNK_MYCTU (SWALL:O33196) (307 aa) fasta FT scores: E(): 2.5e-57, 53.79% id in 303 aa, and to FT Escherichia coli probable inorganic polyphosphate/ATP-NAD FT kinase PpnK or B2615 SWALL:PPNK_ECOLI (SWALL:P37768) (292 FT aa) fasta scores: E(): 6e-17, 33.04% id in 233 aa" FT /protein_id="CAE49705.1" FT /translation="MTIDCHEDRRVLLVPHTGRPQNVASAALAAELLDDSGVGVRVLVP FT AEDTTVATHPVLGQFERVSHSPQATQSVDLVLVLGGDGTFLRAADLAHGADLPVLGINL FT GHVGFLAEWEKDSLDEAVRRVTKGSFRIEERMTLDVSVYDSNGTAIGRGWALNEVSIEN FT SNRSGVLDATLEIDSRPVSSFGCDGIIVSTPTGSTAYAFSAGGPVLWPELDAILVVPNN FT AHALFTKPLVVSPRSSVAVESHPSAFPATAVMDGFRSISVPPGARVEVKRGSRSIKWVR FT LDDIPFTDRLVTKLRLPVEGWRGPKNMIPQINPHSA" FT misc_feature 1178943..1179659 FT /note="HMMPfam hit to PF01513, Domain of unknown function FT DUF15" FT CDS 1179859..1181598 FT /transl_table=11 FT /gene="recN" FT /locus_tag="DIP1182" FT /product="DNA repair protein" FT /note="Similar to Mycobacterium tuberculosis DNA repair FT protein RecN or Rv1696 or MT1735 or MTCI125.18 FT SWALL:RECN_MYCTU (SWALL:O33197) (587 aa) fasta scores: E(): FT 1.9e-53, 47.99% id in 598 aa, and to Streptomyces FT coelicolor DNA repair protein RecN or SCI51.20c FT SWALL:RECN_STRCO (SWALL:Q9S220) (572 aa) fasta scores: E(): FT 1.2e-54, 45.64% id in 585 aa, and to Bacillus subtilis DNA FT repair protein RecN SWALL:RECN_BACSU (SWALL:P17894) (576 FT aa) fasta scores: E(): 2.5e-38, 32.31% id in 591 aa" FT /protein_id="CAE49706.1" FT /translation="MLSDITIHNLGVIPSASLELSEGLTVLTGETGAGKTMVVTGLRLL FT AGGRAEAQRVRSGSSQAVVEGRFLLDSVAPESAEMARAVVSAAGGALDENGEVIVSRTV FT SAHGRSRAHLGGRSVPAASLVEFSKEVLTIHGQNDQLRLLNSDRQRDALDRFSQKISAL FT MTVYSEAYRAWKNLSKDLQERQASKRELAQEVDRLEFAIREISEVDPQPGEEADLLVQI FT ARLQDVDDLRAQAVGALSVIDGAAGVEGYATCDSSDADAASDLIGQALSSVRVSSDPTL FT QGVSQQLEAVTSILMEVSAQLGGFLDELPADPQMLDKLLQRQQALKQLTRKYASDIDGV FT IKWKLKAEQKLESIDVSPEALDQLKKETALAERKMNDAGMALRAARIEAAQELSNAVTK FT ELHGLAMPKAMFSVVVHPTEPQPSGFDEVEFCLAPNNATDPRPLASSASGGELSRVMLA FT LEVILSAGQHGNTLVFDEVDAGVGGRAAVEIGRRLARLAQNNQVIVVTHLPQVAAYADT FT HLHVAKDVGESTVTSGVEKLSEQRRVEDLARMLAGLEDTDTGRAHAKELFEKAQAENRA FT FRV" FT misc_feature 1179943..1179966 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1181197..1181421 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature 1181251..1181271 FT /note="ScanRegExp hit to PS00064, L-lactate dehydrogenase FT active site." FT CDS 1181709..1182902 FT /transl_table=11 FT /locus_tag="DIP1183" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium leprae conserved membrane FT protein ML1361 SWALL:Q9CC30 (EMBL:AL583921) (393 aa) fasta FT scores: E(): 7.2e-57, 44.16% id in 394 aa, and to FT Mycobacterium tuberculosis hypothetical 42.4 kDa protein FT Rv1697 or MTCI125.19 SWALL:O33198 (EMBL:Z98268) (393 aa) FT fasta scores: E(): 2.9e-56, 43.4% id in 394 aa" FT /protein_id="CAE49708.1" FT /translation="MLTMSLFNRSADLPGIHAVTRDCSSLNRGLKRLKSGEIAVVDAPD FT ITRSIAQQLIDAKPLAVVNSGQFSTGAIPNFGPQMLIDAGIMLIDAVGHDVWTILKDGK FT KARLTEDGQIFYGEKLIASGTVITAEQAEVIFVEAQGSLIDRMEAYFGNTIQFIHAEAP FT LLIDGLGVPDRGGMLRGRKVLVVSPGTGHRTQVKGLRNFIREYEPVLIGVDAAADTLVE FT LGYKPNFIVGDPSVIGSDALRSGAQVVLPADPDGHALGLERIQDLGVGAVTFPSSVDSS FT TNLALLLADYHGAELVVNAGSPFDLDLIFADSETASPATLLTRSKLGSRLIDATAITDL FT YTVRSSTGLAWLWAILGILVAAAVIIAIAGTSGDGSFSQNLIDTWNNFALTVQSWFK" FT misc_feature 1182753..1182821 FT /note="1 probable transmembrane helix predicted for DIP1183 FT by TMHMM2.0" FT CDS 1182927..1183877 FT /transl_table=11 FT /locus_tag="DIP1184" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 32.4 kDa protein Rv1698 precursor or MT1737 or MTCI125.20 FT SWALL:YG98_MYCTU (SWALL:P58212) (314 aa) fasta scores: E(): FT 4.4e-22, 31.57% id in 304 aa" FT /protein_id="CAE49710.1" FT /translation="MARKSGRTATAIAGLSFGLALGIGAGMYVLAPNVAGGPNQTTSTL FT ERERDDALESAQIAKAQAKSADSVVSALGRGITTDLLKEKKVLVFRTSDSLDSDADALS FT EALKSAGAENAGTIKLGEKFFTQEGADGLKNIIATTLPAGAQLSTEKMDSGTHAGDALG FT SALLLNKDDGSEQANKEDRGIVLGALRESGYIDFDEASVKPAHAIVLLSGDSDGSKAAF FT SIKNQVSFATALKSKGSGLLVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQ FT IAAILALKEQIDGKSGAYGAAGNVDATSPGIKNPE" FT misc_feature 1182927..1183037 FT /note="Signal peptide predicted for DIP1184 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.428 between residues 37 and 38" FT misc_feature 1182963..1183031 FT /note="1 probable transmembrane helix predicted for DIP1184 FT by TMHMM2.0" FT CDS 1183899..1184537 FT /transl_table=11 FT /locus_tag="DIP1185" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT MutT/NudXx family protein MT1739 SWALL:AAK46008 FT (EMBL:AE007036) (207 aa) fasta scores: E(): 6.7e-35, 48.3% FT id in 207 aa, and to Bacillus subtilis ADP-ribose FT pyrophosphatase NudF SWALL:ADPP_BACSU (SWALL:P54570) (185 FT aa) fasta scores: E(): 7.9e-15, 35.06% id in 154 aa" FT /protein_id="CAE49711.1" FT /translation="MTPHSFVVTDSTLLLDAPIIAVRRDKVLMPKGNESYREIVEHYGA FT VAIVARDESGRILLIKQYRHSVGRRMWELPAGLLDIPAESELQAAQRELKEEAGLASHH FT WSCIIDLVTSPGFCDEAVRIFLADRVYAVPRPEASDEEADLTTQWVALEDAIEMIMRGK FT IVNSIAIAGIFAAREHIEHGASLPSRATEFEIRPTSLAQRHQDLTVPRR" FT misc_feature 1184022..1184426 FT /note="HMMPfam hit to PF00293, MutT-like domain" FT CDS 1184540..1185475 FT /transl_table=11 FT /gene="xerD" FT /locus_tag="DIP1186" FT /product="integrase/recombinase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT integrase/recombinase XerD MT1740 SWALL:AAK46009 FT (EMBL:AE007036) (311 aa) fasta scores: E(): 5.6e-59, 56.1% FT id in 303 aa, and to Bacillus subtilis probable FT integrase/recombinase RipX SWALL:RIPX_BACSU (SWALL:P46352) FT (296 aa) fasta scores: E(): 1.7e-35, 43.09% id in 304 aa, FT and to Escherichia coli integrase/recombinase XerD or XprB FT or B2894 SWALL:XERD_ECOLI (SWALL:P21891) (298 aa) fasta FT scores: E(): 9.3e-34, 43.68% id in 309 aa" FT /protein_id="CAE49713.1" FT /translation="MGSISNIARQWLTHLAVEKGVSDNTLSNYRRDLERYTRWLQVQGI FT TDIENISAQDIERYVQELRKGDSDTGKKPLAASSAARALIVARGLHRFALLENLVENDV FT SADVSPPAMGRHLPDTLSVEEVNRLIEAIPIDDAASPENLRDCALLEFLYATGARISEA FT VGLVVDDVAAIVENEGIVRITGKGNKQRIVPVGDQCLSALERYVVRSRPAMSKGKSHAL FT FLNKRGGQLSRQSAWQILKNSAQRAGIEKDISPHTLRHSFATHLLEGGADVRVVQELLG FT HSSVTTTQIYTHVTADNLRFVWSRSHPRAH" FT misc_feature 1184555..1184836 FT /note="HMMPfam hit to PF02899, Phage integrase, N-terminal FT SAM-like domain" FT misc_feature 1184567..1184632 FT /note="Predicted helix-turn-helix motif with score 1213 FT (+3.32 SD) at aa 10-31, sequence QWLTHLAVEKGVSDNTLSNYRR" FT misc_feature 1184900..1185442 FT /note="HMMPfam hit to PF00589, Phage integrase family" FT CDS 1185667..1186536 FT /transl_table=11 FT /locus_tag="DIP1187" FT /product="Putative regulatory protein" FT /note="Similar to Mycobacterium leprae possible regulatory FT protein ML1367 SWALL:Q9CC29 (EMBL:AL583921) (287 aa) fasta FT scores: E(): 1.8e-76, 72.72% id in 275 aa, and to Bacillus FT subtilis sporulation initiation inhibitor protein Soj FT SWALL:SOJ_BACSU (SWALL:P37522) (253 aa) fasta scores: E(): FT 1.2e-44, 51.21% id in 248 aa" FT /protein_id="CAE49714.1" FT /translation="MGESGLFDTPDQKVGLTGRPLREFPEPEPLHKHGPAKIISMCNQK FT GGVGKTTSTINLGACLAEAGRKVLLVDLDPQGALSAGLNIPHEELEITVYNLLVDRHTS FT IHQAIHHTSVDGLDLVPANIDLSAAEIQLVNEVGREQTLARALRPVMRDYDFIILDCQP FT SLGLLTVNALTCSHGVIIPMECEYFSLRGLALLTDTVEKVRDRLNFDLEIVGILVTMFD FT RRTTHAREVMSRVVEVFEDRVFDTVITRTVRFPETSVAGEPITTWAPSSQGAQQYRQLA FT REVIERTA" FT misc_feature 1186021..1186356 FT /note="HMMPfam hit to PF00991, ParA family ATPase" FT CDS 1186579..1187397 FT /transl_table=11 FT /locus_tag="DIP1188" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 30.6 kDa protein Rv1709 or MTCI125.31 SWALL:O33208 FT (EMBL:Z98268) (278 aa) fasta scores: E(): 2.2e-55, 60.31% FT id in 252 aa, and to Streptomyces coelicolor hypothetical FT 29.6 kDa protein SCI51.10c SWALL:Q9S230 (EMBL:AL109848) FT (264 aa) fasta scores: E(): 1.2e-46, 59.41% id in 239 aa" FT /protein_id="CAE49715.1" FT /translation="MARTAVPDNQPEITGFRIVLNNFEGPFDLLLQLISAKKLDVTDVA FT LHKVTDDFVAYTRALGEFAELDEVTEFLVVAATLLDLKAARLLPRGEVDDLSDLELLES FT RDLLFARLLQYKAYKQVADQFARWQLAAQRRYPRAVGMEEQFSSLLPPVKISHTPKSFA FT ELAASVFRPKPPDTVGTSHVHGVEVSVPEQAGKVLDLLVECGEGVWMDFPDLITGCRVS FT LEVVGRFLALLELYKARAVSLEQEESLGALRVSWTGIHVDPAIVAASNWA" FT misc_feature 1186675..1187349 FT /note="HMMPfam hit to PF02616, Uncharacterized ACR, FT COG1354" FT CDS 1187512..1188117 FT /transl_table=11 FT /gene="bioD1" FT /locus_tag="DIP1189" FT /product="dethiobiotin synthetase" FT /EC_number="6.3.3.3" FT /note="Similar to Corynebacterium glutamicum dethiobiotin FT synthetase BioD SWALL:BIOD_CORGL (SWALL:P46397) (224 aa) FT fasta scores: E(): 4e-08, 38.94% id in 208 aa, and to FT Streptomyces coelicolor dethiobiotin synthetase BioD FT SWALL:Q9FCC1 (EMBL:AL391014) (238 aa) fasta scores: E(): FT 3.6e-06, 28.37% id in 222 aa. Note: Similar to the FT downstream CDS DIP1192, 222 aa; E(): 1.3e-13; 38.914% FT identity in 221 aa overlap - possible duplication" FT /protein_id="CAE49716.1" FT /translation="MGIVVVSGLASGVGKTTATAAIVKILQAKGRDVVPAKIARLQNLC FT ASPDIGTIEKLTGIRGEDFSQLDDPLVQVCHLSESGKTVVVEGSGGLSVALIGKKTIAD FT IAAELDAPLVVVSGMNRGAVELAVNAVGFARACGANVAGLLGGKLPAGADLRTRLTLVE FT ASRASGVPFIGSLNDGVGSLGCEPFAEALSTIFIPDEW" FT misc_feature 1187512..1187571 FT /note="Signal peptide predicted for DIP1189 by SignalP 2.0 FT HMM (Signal peptide probability 0.749) with cleavage site FT probability 0.733 between residues 20 and 21" FT misc_feature 1187518..1188069 FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT CDS complement(1188118..1189614) FT /transl_table=11 FT /locus_tag="DIP1190" FT /product="Putative peptide transport protein" FT /note="Similar to Bacillus subtilis hypothetical FT transporter YclF SWALL:YCLF_BACSU (SWALL:P94408) (492 aa) FT fasta scores: E(): 2e-53, 33.73% id in 495 aa, and to FT Neisseria meningitidis putative peptide transporter NMA0222 FT SWALL:Q9JWV5 (EMBL:AL162752) (485 aa) fasta scores: E(): FT 6.2e-47, 34.63% id in 488 aa" FT /protein_id="CAE49717.1" FT /translation="MQLIEQRSIDSKNNRAMFWRHPRMMTSVVSIEAWERFSFYGMQAI FT LGFYLYYSIADGGLGIAKKDATALIGAYGALVYLCTFIGGWVGDHLLGAEKTLLSGAAL FT LVIGHISLSTFPGFYGLAIGLPLIAVGSGLLKTAAITVLGAVYDENPKQRETGFQFFYL FT GIQLAAFFGPLLTGWLAQQYSFHIGFIAAAFLMIIGISLYVFARPAAMASLCTQTRQRI FT TQPQLTATTTQAIFIVGGSTLALFSATFCVATGLIKPVVLATFLLALTLGAALLLYTSM FT FRSSEVTLAEKIQLLRYIPIFLASVAFWAIMNQTYGVLAVYSDVRLNRSVGDFLIPAAW FT LQSLNPFYVFILSLPLAYLWLRLGDRSPRPATKLSIGVGIAGLGFAILIPYAGGEPNST FT PFIVLAISILVTAIGELLIGPIGMAATAQYAPRKYATQFSAMFFLTMAIGTALSGHISQ FT YYNPDNAQAEARYFIACSATAMVIGIISYMLTRIITTKTQ" FT misc_feature complement(order(1188148..1188204,1188235..1188300, FT 1188340..1188405,1188436..1188492,1188532..1188597, FT 1188679..1188729,1188769..1188834,1188847..1188912, FT 1189000..1189065,1189078..1189134,1189174..1189239, FT 1189252..1189317,1189339..1189404,1189450..1189515)) FT /note="14 probable transmembrane helices predicted for FT DIP1190 by TMHMM2.0" FT misc_feature complement(1188265..1188732) FT /note="HMMPfam hit to PF00854, POT family" FT misc_feature complement(1188991..1189332) FT /note="HMMPfam hit to PF00854, POT family" FT CDS 1189692..1190987 FT /transl_table=11 FT /gene="bioA" FT /locus_tag="DIP1191" FT /product="adenosylmethionine-8-amino-7-oxononanoate FT aminotransferase" FT /EC_number="2.6.1.62" FT /note="Similar to Corynebacterium glutamicum FT adenosylmethionine-8-amino-7-oxononanoate aminotransferase FT BioA SWALL:BIOA_CORGL (SWALL:P46395) (423 aa) fasta scores: FT E(): 7.2e-95, 55.68% id in 422 aa, and to Escherichia coli FT adenosylmethionine-8-amino-7-oxononanoate aminotransferase FT BioA or B0774 SWALL:BIOA_ECOLI (SWALL:P12995) (429 aa) FT fasta scores: E(): 3.5e-87, 52.98% id in 419 aa" FT /protein_id="CAE49718.1" FT /translation="MENNSFAQFDRDHIWHPYGPMPATVAPYVVAATNNTDIILDNGTR FT LIDGMSSWWAAAFGHGNERLKAAAHRQIDVMSHVMFGGLTHVPAIKLARQLCELTDEPL FT TKVFFSDSGSVAVEVALKMVYQYQLGQGHPERRRMLTWRGGYHGDTFATMSLCDPEGGM FT HAMWEGRVMDNVFASRPPLWGAASNEISAYIDHLDSLIDSTIAGIIVEPVVQGAGGMRF FT HAPEILKGIRQLCDQHGILFIADEIATGFGRTGNLFATQAAKVTPDILCVGKSLTGGFM FT SLAATITTDAVAESISSAAGGGALMHGPTFMGNPLACAVASEALSIIAEGDWKQQVAEI FT ESELKKGLVPLASNPAVRDVRVLGAIGVVEMKEPVDMKRATHAAVNAGVWLRPFGRLVY FT TMPPFVCTHKQIQKISCAIASIVHTEQERFER" FT misc_feature 1189740..1190969 FT /note="HMMPfam hit to PF00202, Aminotransferase class-III" FT misc_feature 1190415..1190528 FT /note="ScanRegExp hit to PS00600, Aminotransferases FT class-III pyridoxal-phosphate attachment site." FT CDS 1191000..1191668 FT /transl_table=11 FT /gene="bioD2" FT /locus_tag="DIP1192" FT /product="dethiobiotin synthetase" FT /EC_number="6.3.3.3" FT /note="Similar to Corynebacterium glutamicum dethiobiotin FT synthetase BioD SWALL:BIOD_CORGL (SWALL:P46397) (224 aa) FT fasta scores: E(): 2.5e-40, 54.09% id in 220 aa, and to FT Mycobacterium leprae dethiobiotin synthetase BioD or ML1218 FT or B1170_C1_159 SWALL:BIOD_MYCLE (SWALL:P45486) (226 aa) FT fasta scores: E(): 2.4e-21, 38.96% id in 213 aa. Note: FT Similar to the upstream CDS DIP1189, 201 aa; E(): 1.3e-13; FT 38.914% identity in 221 aa overlap - possible duplication" FT /protein_id="CAE49719.1" FT /translation="MAIVVVTGTNTDVGKTIASAAVCQHYSRQGFRVVPVKPVQTGEPK FT GSGDAQTIEKLTGIVGKCFARFPEPLAPNLSAQRAGMQQLNLEEIVNKIRELDGPQTVV FT VVEGAGGLLVRLADSFTIADVAAQLDAPLIVVTNMALGSLNAAELTVEAAQRRGLKVLG FT LIGGSMPKNPDLATSLNVAEMEKVTGIPLWGSIAEGAGQLSKEAFCQLVEDLHLPTMWP FT " FT misc_feature 1191006..1191617 FT /note="HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide FT synthase" FT CDS 1191785..1193359 FT /transl_table=11 FT /locus_tag="DIP1193" FT /product="Putative Na+/H+ antiporter" FT /note="Similar to Streptomyces coelicolor putative Na+/H+ FT antiporter SC4A10.04c SWALL:Q9S2Y0 (EMBL:AL109663) (528 aa) FT fasta scores: E(): 1.2e-47, 39.09% id in 532 aa, and to FT Rhizobium loti Na+/H+ antiporter MLL3064 SWALL:Q98H22 FT (EMBL:AP003001) (517 aa) fasta scores: E(): 9.6e-31, 28.62% FT id in 531 aa" FT /protein_id="CAE49720.1" FT /translation="MEILIGLLALLFATVIMVAVGDRTGLPWPVLLTLVAAGGIFLPWL FT PEVAIPEEMILPIFIPPLLWALARHSSWASIKRQWRTVVLLSVLLVIVTAVTVGLVAYL FT LVPTLSFAAAVVIGAAISPPDPVAVDAVAEPAGVPRRLSNTLQVEGLFNDAASIVVFNL FT ALSVVQSGHDITWWSALSTLVYSAAVAVVIGFVLGTGCAKLHSWMTSSVARNAFTWVIP FT FATFIAAEELHASGVIAIVIAAIQFNSKSQAGAEDRLSGSAFWQVVELLFTGVAFGLIG FT ISVRDAIHSAGANLWHGVWFGLVLALTAIAVRALWLYLLYVGNKKAGRRTGAPLRLQEV FT LLLTWGGMRGLVTLALVLSIPMTTGFAIYRELSIVALTVLLVTMVIPGLTLPALMRVLN FT LEEGPDAFGDYAREKLFVRARFAARQVLDSYSHDIPEEFMASLRRRFEHDINADEDDDD FT AMTPEERRKIQERRFALFNKVRLEALYASQAELLRARSERDVDPMIVDEVLFEIDSQII FT AAEKSTR" FT misc_feature 1191785..1191892 FT /note="Signal peptide predicted for DIP1193 by SignalP 2.0 FT HMM (Signal peptide probability 0.888) with cleavage site FT probability 0.384 between residues 36 and 37" FT misc_feature order(1191794..1191847,1191866..1191934,1191944..1192012, FT 1192031..1192099,1192310..1192378,1192415..1192468, FT 1192478..1192531,1192565..1192633,1192676..1192744, FT 1192802..1192870,1192898..1192966) FT /note="11 probable transmembrane helices predicted for FT DIP1193 by TMHMM2.0" FT misc_feature 1191797..1192990 FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family" FT misc_feature 1191806..1191868 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 1191932..1191994 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 1192025..1192102 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 1192304..1192372 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT misc_feature 1192913..1192975 FT /note="FPrintScan hit to PR00173, Glutamate-aspartate FT symporter signature" FT CDS 1193378..1193932 FT /transl_table=11 FT /locus_tag="DIP1194" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 25.3 FT kDa protein ML1369 or MLC1351.04C SWALL:O05669 FT (EMBL:Z95117) (231 aa) fasta scores: E(): 3.1e-33, 59.19% FT id in 174 aa, and to Bacillus halodurans BH1561 protein FT SWALL:Q9KCL0 (EMBL:AP001512) (197 aa) fasta scores: E(): FT 1.7e-13, 38.67% id in 181 aa" FT /protein_id="CAE49721.1" FT /translation="MMTVLRSQIESILLVVDQPASVAALARATEAAPETVTSVLRSMAQ FT EFEDRGSGIEVRESPEGWRLYTVKRNADVVEKFLLDGSHTKLSRAALETLAVVAYRQPA FT TRAQVAAVRGVNVDGVMRTLQLRGLIREVAINPGTEGVNGSAHRYETTELFLDLLGIDS FT LERLPDLAPLLPDIDSIDEYF" FT CDS 1194036..1195001 FT /transl_table=11 FT /locus_tag="DIP1195" FT /product="Putative pseudouridine synthase B" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 27.6 kDa protein Rv1711 or MT1751.1 or MTCI125.33 FT SWALL:YH11_MYCTU (SWALL:O33210) (254 aa) fasta scores: E(): FT 2.8e-52, 60.74% id in 242 aa, and to Bacillus subtilis FT ribosomal large subunit pseudouridine synthase B RluB FT SWALL:RLUB_BACSU (SWALL:P35159) (229 aa) fasta scores: E(): FT 2e-28, 46.72% id in 229 aa. Note: Alternative start codon FT at residue 55" FT /protein_id="CAE49722.1" FT /translation="MNRTARRDGTPEKPRRGSQGGSRGDYGKPKRSHAKPQSANSGRPI FT KQRKQRDSEMLISNARPARHQHVGRREAGDGSTEGIRLQKVLAQAGVASRRHAEILIDA FT GRVEVNGKIVMTQGMRVNPNVDVIRVDGVRVNVNENLQYFVLNKPRGLQSTMSDDMGRP FT CVGDIVGERISAGQRLFHVGRLDAATEGLLLLTNDGELANRLMHPRYEVSKTYLATVLG FT EADKRLVKQLRDGIELDDGPAKADLVQIIDTFQGKSLIRIELHEGRKHIVRRMLKTAGF FT PVQRLVRTKIHTIQLGEQTPGAIRALNSSELASLYKAVGM" FT misc_feature 1194276..1194416 FT /note="HMMPfam hit to PF01479, S4 domain" FT misc_feature 1194276..1194461 FT /note="HMMSmart hit to SM00363, S4 RNA-binding domain" FT misc_feature 1194459..1194869 FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase" FT misc_feature 1194582..1194626 FT /note="ScanRegExp hit to PS01149, Rsu family of FT pseudouridine synthase signature." FT CDS 1195003..1195728 FT /transl_table=11 FT /gene="cmk" FT /locus_tag="DIP1196" FT /product="cytidylate kinase" FT /EC_number="2.7.4.14" FT /note="Similar to Mycobacterium tuberculosis cytidylate FT kinase Cmk or Rv1712 or MT1752 or MTCI125.34 FT SWALL:KCY_MYCTU (SWALL:O33211) (230 aa) fasta scores: E(): FT 1.9e-35, 55.45% id in 220 aa, and to Escherichia coli FT cytidylate kinase Cmk or MssA or B0910 or Z1256 or ECS0993 FT SWALL:KCY_ECOLI (SWALL:P23863) (227 aa) fasta scores: E(): FT 9.7e-25, 43.54% id in 209 aa" FT /protein_id="CAE49723.1" FT /translation="MSTADSTALSNMPEGGLIVAVDGPSGAGKSTVCRRIASMLGAKYL FT DTGAMYRVATLHVLRQGINPSDTTAVVQATRELPLSVNDDPASREVILDGEDVSNEIRG FT RLVTQNVSAVAAILEVRENLVALQRELAATAHRCVVDGRDIGSTVLVDAPVKIFLTASA FT EVRAQRRYDQDVAAGRLTDLATVLADVKRRDELDSNRSVSPLAPASDATVVDTSTLTLD FT QVVDTLMTLIEKSAERTAR" FT misc_feature 1195048..1195101 FT /note="FPrintScan hit to PR00988, Uridine kinase signature" FT misc_feature 1195054..1195131 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 1195069..1195092 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1195216..1195692 FT /note="HMMPfam hit to PF02224, Cytidylate kinase" FT misc_feature 1195492..1195524 FT /note="FPrintScan hit to PR00988, Uridine kinase signature" FT CDS 1195725..1197368 FT /transl_table=11 FT /gene="engA" FT /locus_tag="DIP1197" FT /product="Putative GTP-binding protein" FT /note="Similar to although longer in its N-terminal region FT than Mycobacterium tuberculosis probable GTP-binding FT protein EngA or Rv1713 or MT1753 or MTCI125.35 FT SWALL:ENGA_MYCTU (SWALL:O33212) (463 aa) fasta scores: E(): FT 4e-97, 58.78% id in 461 aa, and to Bacillus subtilis FT probable GTP-binding protein EngA SWALL:ENGA_BACSU FT (SWALL:P50743) (436 aa) fasta scores: E(): 1.2e-53, 40.5% FT id in 432 aa" FT /protein_id="CAE49724.1" FT /translation="MSNAHNAPLGGNNSSDEDQETVFVYHTAHGEVDAQEAFVEEDVVV FT DGAGYASDGFDENDFDFDFEHDSEGNVVFDEADFGEADFGEDYTDEDWEELERAFGVGS FT RAIESENLCTVAIVGRPNVGKSSLVNRFLGRREAVVEDFPGVTRDRISYLADWGGRRFW FT VQDTGGWDPNVKGIHAVIARQAETAMATADVIVMVVDTKVGITETDSVMARKLQKSEVP FT VILVANKFDSDSQYADMAEFYALGLGDPWPVSAQHGRGGADVLEQILAAFPETPRATSI FT VEGPRRVALVGKPNVGKSSLLNKMSGEDRSVVDNVSGTTVDPVDSIVKLDKHLWKFIDT FT AGLRKKVKNAQGHEYYASLRTRGVIDAAEICIFMIDSSEPVSEQDQRVLAMILDAGKAL FT VLVFNKWDLMEEDRRWELEREIDLQLAHIPWVKRINISAKTGRALQRLEPYMLEALESW FT DKRVTTGQLNNWLRATIAQNPPPMKGGRVPRVLFATQASTQPPTIVLFTTGFLDAGYRR FT YLERKFRESFGFEGSPVKIAVRVRERRSKK" FT misc_feature 1196061..1196126 FT /note="FPrintScan hit to PR00449, Transforming protein P21 FT ras signature" FT misc_feature 1196079..1196102 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1196265..1197059 FT /note="HMMPfam hit to PF01926, GTPase of unknown function" FT misc_feature 1196379..1196420 FT /note="FPrintScan hit to PR00449, Transforming protein P21 FT ras signature" FT misc_feature 1196586..1196648 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature 1196598..1196621 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1196652..1196708 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT misc_feature 1196733..1196780 FT /note="FPrintScan hit to PR00326, GTP1/OBG GTP-binding FT protein family signature" FT CDS 1197600..1198985 FT /transl_table=11 FT /gene="dcuB" FT /gene_synonym="genf" FT /locus_tag="DIP1198" FT /product="anaerobic C4-dicarboxylate transporter" FT /note="Similar to Escherichia coli anaerobic FT C4-dicarboxylate transporter DcuB or GenF or B4123 or Z5725 FT or ECS5105 SWALL:DCUB_ECOLI (SWALL:P14409) (446 aa) fasta FT scores: E(): 4.3e-91, 54.5% id in 444 aa, and to Wolinella FT succinogenes C4-dicarboxylate membrane transporter DcuB FT SWALL:Q9ZEN8 (EMBL:AJ131242) (452 aa) fasta scores: E(): FT 4e-94, 54.12% id in 449 aa" FT /protein_id="CAE49725.1" FT /translation="MLASILDPTSGIALLLQIAVILSCLVLGTRYGGMGLGLISGIGLF FT ILAFIFGLKPGEPPVSVMLTIIAVIGCAATLQQARGLDVMMQFAEKILRKHPERITILA FT PITTWLLTVLCGTGHVVYTMFPIIEDIAIKTNIRPERPMAVSSTAAQMGITASPVSVAI FT VSLTSILAEHAGVTQSAYSIPQILAVAMPASLCGVLVAAVWSLHRGKDLDKDEAFQERL FT KDPEFKKSVYSESHSLIGQRFEKGAYRATGIFLGAIAIVVLLGAIEWLRPSFPNSNGDL FT KPLSMNLVIQMIMLVAGALMMLLCKVEPGKIASTTVFKAGMTAVFSVFGVAWMADTFFQ FT AHLDSLVDALSGVVQSHAWAYALVLLLVSKLVNSQGAAIVAIVPLGLKLGLDPATVIGF FT IGAAYGYFILPTYPSDLACIGFDKTGTTRIGKYVLNHSFIIPGFICVIVSCIVGTVLAQ FT VLL" FT misc_feature order(1197633..1197686,1197699..1197758,1197777..1197836, FT 1197915..1197983,1198044..1198112,1198140..1198208, FT 1198335..1198403,1198446..1198514,1198533..1198601, FT 1198644..1198712,1198731..1198799,1198911..1198979) FT /note="12 probable transmembrane helices predicted for FT DIP1198 by TMHMM2.0" FT CDS complement(1199016..1200020) FT /transl_table=11 FT /locus_tag="DIP1199" FT /product="Putative methyltransferase" FT /note="Similar to, although longer in its N-terminal region FT than Mycobacterium tuberculosis putative methyltransferase FT Rv3342 or MT3445 or MTV016.42 SWALL:YX42_MYCTU FT (SWALL:O53392) (243 aa) fasta scores: E(): 2e-16, 31.71% id FT in 227 aa, and to Pseudomonas aeruginosa hypothetical FT protein PA0558 SWALL:Q9I5X8 (EMBL:AE004492) (255 aa) fasta FT scores: E(): 8.9e-11, 28.06% id in 253 aa" FT /protein_id="CAE49726.1" FT /translation="MEIHSSAAAEVFPVCRSLLGKLPAHSHNRSVAPTVCDYYPQIMKT FT YNSKMTTQHSSDIRNSQNISASFVTPHDAPVTSRKYVPKFNSNNHRIKTAAAFEKGSDI FT YHAVRPNYPNSVIELLNLSPNSRVLDIGCGTGKLTEQIAQQTSSVYALDPSKDMLDSFR FT STLDIPSWQATAEQTAVSDSRFSTLTCAQTWHWVEPLAASAELDRISTDDAQLLLVWNT FT LDVSVPWVHRLSRIMHSGDTLAEGFIPHVAQPWELVSVLRGKHAQELYPDQIHTLAHTR FT SYWLRASEKTREKLTHNLSWYLTDHLELPSTSLVEIPYRFDAFLYKKALVKTQ" FT misc_feature complement(1199523..1199660) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS 1200019..1201269 FT /transl_table=11 FT /locus_tag="DIP1200" FT /product="Putative membrane protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 45.7 kDa protein in lysI 3'region SWALL:YLI2_CORGL FT (SWALL:P35866) (426 aa) fasta scores: E(): 4.7e-68, 46.93% FT id in 424 aa, and to Mycobacterium tuberculosis FT hypothetical 51.8 kDa protein Rv1639c or MTCY06H11.03c FT SWALL:P94973 (EMBL:Z85982) (489 aa) fasta scores: E(): FT 1.8e-16, 23.89% id in 385 aa" FT /protein_id="CAE49727.1" FT /translation="MSRVLSISLTQPLMMWFFMGLCVVSLLMIVYAVWRPWRVKGVVIT FT LVAITVGAFAAKIIVEKLWRPFPDSIPISIYFAVALTVIALFATMFIRRRILLFIALCL FT SLVGSAGVANLTYQLYPDLRSLVPVEVAREMSYSEFAHVSKAPTAQGREIGAKVTFSLV FT GEKSSFPARDAIAYIPPSYWTKQADSLPVLVLMAGSPGSPSDWFESARVDTVADEYQRT FT HDGKSPIVISVDATATLGGDPLCVDGPEFKVMTYLTQDVPTGIKNAFKVNSDQSQWTIG FT GLSYGGTCSFQVITNHPSAYGHFLDFSGQDELVSGTHEQTLAKFFGGDQKRYDDSNPAA FT ILKKYSDGNRFGSISGVFVAGSQDAESQKGLKRLNDLAQHAGMHTQYLEVPGGHDFGTW FT REAIRATFALSAQYGGL" FT misc_feature 1200019..1200114 FT /note="Signal peptide predicted for DIP1200 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.556 between residues 32 and 33" FT misc_feature order(1200061..1200120,1200139..1200198,1200226..1200294, FT 1200307..1200375) FT /note="4 probable transmembrane helices predicted for FT DIP1200 by TMHMM2.0" FT misc_feature 1200589..1200915 FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT tRNA 1201374..1201447 FT /gene="tRNA-Pro" FT /product="transfer RNA-Pro" FT /anticodon=(pos:1201408..1201410,aa:Pro) FT /note="tRNA Pro anticodon GGG, Cove score 62.21" FT CDS complement(1201642..1202019) FT /transl_table=11 FT /locus_tag="DIP1201" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SCI52.19 SWALL:Q9AD90 (EMBL:AL590507) FT (124 aa) fasta scores: E(): 2.7e-20, 49.58% id in 121 aa, FT and to Escherichia coli hypothetical protein YchJ or B1233 FT SWALL:YCHJ_ECOLI (SWALL:P37052) (152 aa) fasta scores: E(): FT 7.6e-15, 38.71% id in 124 aa" FT /protein_id="CAE49728.1" FT /translation="MMNCPCGSGTSYSDCCQPFHTKAKNAPTAELLMRSRYSAFVLGNE FT EYLLYSWAPETAPHSLNLEEFIMWRGLTIHQSYHGGLFDSTGIVEFTARYAVCGQLQSQ FT HETSHFRRHDGRWVYVDGDLH" FT misc_feature complement(1201960..1202013) FT /note="HMMPfam hit to PF02810, SEC-C motif" FT CDS complement(1202026..1203213) FT /transl_table=11 FT /locus_tag="DIP1202" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT RA1044 or SMA1898 SWALL:AAK65702 (EMBL:AE007290) (408 aa) FT fasta scores: E(): 8.8e-49, 39.34% id in 399 aa, and to FT Clostridium acetobutylicum alpha/beta superfamily hydrolase FT CAC3665 SWALL:AAK81587 (EMBL:AE007861) (265 aa) fasta FT scores: E(): 2.6e-07, 22.43% id in 263 aa" FT /protein_id="CAE49729.1" FT /translation="MHSRSVKFPSSKGHQIAGTIDFPDGTPRAFAMFAHCFTGSRFTPG FT AARVSKELAERGIACLRFDFPGLGQSEGIFSETSFSENVADIKAAADWLGQHYSAPQLL FT IGHSLGGAASLKAATTLKCLRGVATIGAPFDPAHAVLHFADRIGEVDENGAVTLTLGGR FT DITISREFLEDLADTNPEAYLPRLRKPLLILHSPIDQTVGVDNAQLIFRTTRYPKSLVA FT LDKVDHLLTKQGSAQQAARIINTWFEQHIVAENEDPNADTLPEGVAVAQSIPAGKFADI FT VHTGTHSFTTDREKALGGKNLGVSPTSLLISALAAATSQEIRLAAKESRIHSLEDVNVT FT ISKTVGDGERVHLRRNISLVGDLTDDERHELLLAARNSDIEKMLQGNVTINDQDV" FT misc_feature complement(1202845..1203129) FT /note="ProfileScan hit to PS50187, FT Esterase/lipase/thioesterase active site serine." FT CDS 1203482..1205776 FT /transl_table=11 FT /gene="secA2" FT /locus_tag="DIP1203" FT /product="Putative preprotein translocase" FT /note="Similar to Mycobacterium tuberculosis preprotein FT translocase SecA 2 subunit SecA2 or Rv1821 or MT1869 or FT MTCY1A11.22c SWALL:SEA2_MYCTU (SWALL:Q50612) (808 aa) fasta FT scores: E(): 7.8e-144, 52.94% id in 765 aa, and to Bacillus FT subtilis preprotein translocase SecA subunit SecA or Div+ FT SWALL:SECA_BACSU (SWALL:P28366) (841 aa) fasta scores: E(): FT 2.7e-72, 35.36% id in 738 aa" FT /protein_id="CAE49730.1" FT /translation="MAGFRWFWDAMGGKNTRNQTKSKNIVAQAAKRGVQFASLSDADVV FT ARAHECAQHSDDESRADLLALLSIGAQRSLSMNPFNVQLQAVLRILEGDVIHMATGEGK FT TLVGAMASVGYALQGKRVHSITVNDYLAERDAEWMGDLVRYFGLTVSAVTESLNTEQRR FT RAYASSIVYAPVTEIGFDVLRDQLVTQRSHAVQNGADVAIVDEADSVLIDEALVPLVLA FT GNEPGTAPAGRITEIVRRLKENEHYSVDADRRNVSLNDKGAALLEQVLGIQSLYDDAHI FT GTTLVQVNLALHAQALLIRDVHYIIRDGKIALIDASKGRVAQLQRWPDGVQAAVEAKEG FT LVVTEGGRILDTLTLQSLMGRYPIVCGMTGTAVEATDQLRQFYDLRVSVIEPHKQSQRF FT DEADRVYATQAEKFRALVKEIELLHTTGQPVLIGTSDVSESEELAQALQARDITVNVLN FT AKNDAEEAQIIAEAGDIGRVTVSTQMAGRGTDIRLGGANEKDRDAVVAKGGLAVIGSSR FT HRSSRLDNQLRGRAGRQGDPGLSLFFVSLEDDVVVVGGAGEEIKALPDADGRIDSKRIT FT DFVAHCQRVTEGQLLEIHSQTWKYNKLLADQRVIIDERRARLLDTDQAWVELSEAVPEK FT AHKLSDKLDPAILVQAAREVMLYHLDRCWSDHLALMDHVRESIHLRTIARETPLDEYHR FT IAVREFKQLAQRAVDLAVETFRDVTIDQDGAHLADAGLTRPSATWTYMVSDNPLSNNNR FT SVINGIGSIFR" FT misc_feature 1203656..1203730 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 1203689..1204729 FT /note="HMMPfam hit to PF01043, SecA protein, amino terminal FT region" FT misc_feature 1203770..1203814 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 1203818..1203850 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 1203977..1204039 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 1204430..1204498 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 1204541..1204594 FT /note="FPrintScan hit to PR00906, SecA protein signature" FT misc_feature 1204802..1205086 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT misc_feature 1204913..1204960 FT /note="ScanRegExp hit to PS01312, Protein secA signatures." FT CDS 1205943..1206374 FT /transl_table=11 FT /locus_tag="DIP1204" FT /product="Putative signal transduction protein" FT /note="Similar to Mycobacterium smegmatis putative signal FT transduction protein GarA SWALL:Q9RP36 (EMBL:AF173844) (158 FT aa) fasta scores: E(): 6.6e-34, 68.21% id in 151 aa, and to FT Mycobacterium tuberculosis hypothetical 17.3 kDa protein FT Rv1827 or MT1875 or MTCY1A11.16c SWALL:YI27_MYCTU FT (SWALL:Q50606) (162 aa) fasta scores: E(): 3.7e-32, 67.83% FT id in 143 aa" FT /protein_id="CAE49731.1" FT /translation="MSDNTGAPDVQVETTSVFRADLLKEMESGAGAATASGSDVTPPAG FT AGMLVVKRGPNAGARFLLDRPTTTAGRHPESDIFLDDVTVSRRHAEFRRQDGSFEVVDV FT GSLNGTYVNREPRNSEVLSSGDEVQIGKFRLVFIEGPRA" FT misc_feature 1206141..1206293 FT /note="HMMSmart hit to SM00240, Forkhead associated domain" FT misc_feature 1206144..1206293 FT /note="ProfileScan hit to PS50006, Forkhead-associated FT (FHA) domain profile." FT misc_feature 1206144..1206335 FT /note="HMMPfam hit to PF00498, FHA domain" FT CDS 1206545..1207222 FT /transl_table=11 FT /locus_tag="DIP1205" FT /product="Putative merR-family regulatory protein" FT /note="Similar to Streptomyces coelicolor hypothetical 26.5 FT kDa protein SC1A8A.03c SWALL:Q9KZP9 (EMBL:AL353861) (246 FT aa) fasta scores: E(): 1.4e-27, 41.44% id in 222 aa, and to FT Mycobacterium tuberculosis hypothetical 26.4 kDa protein FT Rv1828 or MT1876 or MTCY1A11.15c SWALL:YI28_MYCTU FT (SWALL:Q50605) (247 aa) fasta scores: E(): 1.2e-14, 40.25% FT id in 236 aa" FT /protein_id="CAE49732.1" FT /translation="MSIGVVLAKITAEFPDVTVSKIRYLESEGLITPQRTSTGYRRFTQ FT DDVERLRYILVTQRDNYLPLKVIREQLEAMDSGAVTPISRGSDNAPLISPESFRTSVVT FT RLSDSDVAARAQVSESEVSELAEAGLIRPDSSGFFTADDVQVVSVAVQLKEFGFDVRHL FT KSLRNLASRHADLISRATTPVARSQSESARQRAEEMSQQLSALVVSLNATMLRSMLRDE FT LNR" FT misc_feature 1206545..1206769 FT /note="HMMSmart hit to SM00422, helix_turn_helix, mercury FT resistance" FT misc_feature 1206578..1206673 FT /note="HMMPfam hit to PF00376, Bacterial regulatory FT proteins, merR family" FT CDS 1207245..1207832 FT /transl_table=11 FT /locus_tag="DIP1206" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 18.1 FT kDa protein ML2074 or MLCB1788.34c SWALL:O32917 FT (EMBL:AL008609) (164 aa) fasta scores: E(): 7.8e-13, 32.02% FT id in 153 aa, and to Mycobacterium tuberculosis FT hypothetical 18.1 kDa protein Rv1829 or MT1877 or FT MTCY1A11.14c SWALL:YI29_MYCTU (SWALL:Q50604) (164 aa) fasta FT scores: E(): 9.1e-13, 34.07% id in 135 aa" FT /protein_id="CAE49733.1" FT /translation="MAFRQVEYKGVHFFPPEDDACLVFSWSERRRILPIWVDVEEGIRL FT SERSEHGAPRRPLAHDVLIETINRMGGSVEAIRVVSYYEGVFICSLVLDNQEEIDCRPS FT DAIAISELIGVAISVDDEVLNQASVFVPESDMEAYLGFVFPKDVHDELDSDPTKSQADA FT DFSNLMESLGVSEQDLLGSDDFGDDSFDLGDS" FT misc_feature 1207251..1207649 FT /note="HMMPfam hit to PF02577, Uncharacterized ACR, FT COG1259" FT CDS 1207984..1208544 FT /transl_table=11 FT /locus_tag="DIP1207" FT /product="Putative transcriptional regulator" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 24.0 kDa protein Rv1830 or MT1879 or MTCY1A11.13c FT SWALL:YI30_MYCTU (SWALL:Q50603) (225 aa) fasta scores: E(): FT 1.5e-41, 72.98% id in 174 aa, and to Bacillus subtilis FT regulatory protein GlnR SWALL:GLNR_BACSU (SWALL:P37582) FT (135 aa) fasta scores: E(): 0.22, 29.16% id in 72 aa" FT /protein_id="CAE49734.1" FT /translation="MEEMRDNDVPVQQALFDMGPDEEVGYRVPIACQVAGITYRQLDYW FT ARTKLVEPTIRTARGSGSQRLYSFKDILVLKIVKRLLDTGISLQNIRLAVDKLRNRGVD FT DLAEITLVSDGTTVYECRSNEEVIDLLGGGQGVFGIAVPGIVRELTGTISSFPSEKISD FT FLSNSPAAGGIDELAARRLRKTS" FT misc_feature 1208059..1208277 FT /note="HMMSmart hit to SM00422, helix_turn_helix, mercury FT resistance" FT stem_loop complement(1208562..1208608) FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(1208620..1210032) FT /transl_table=11 FT /locus_tag="DIP1208" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49735.1" FT /translation="MAKHSDGKNNYRLSPSVIAIAIVIVLVAAGVFLWTQAKREDSAKS FT SCINGNLTLPIATNNKEVASQIIDAYNSSGRVTRDYCVRAELTDSVAHAGVYLSDESDH FT QVNQVLSAEKRSPATLEWPTAATDQVGIARREDATEDAPVTYPVKSDAVSSALVAAFTH FT NNDASAATKMLRDFSETTIDSAVAQSAPKIVVSKSETPQGYSFEEIQNLSKPLRAVALN FT PTDSVNEEVVRAGADFGTAIAANTPDAQKPQKLSQEVATAAEILASLTDSSPAVDSQSN FT QSPRDILMLLDTSEYINGVSTDGIRWFDAASHGLINLAQKQEERGKAIGLWNYSSPLTP FT GITQGWRSNLNFDTLDAARQVKDVLGNFGTGGQPQTLAATSAALNYAVEHAQHAGNTSV FT VIVFTGTNDSFTGLAESVRKAQESHVSLHAIQIGDGQDDTNIAQAAKDTNGSYVHATSA FT AELDRAIASTTK" FT misc_feature complement(1208623..1209177) FT /note="ProfileScan hit to PS50234, VWFA domain profile." FT misc_feature complement(1208623..1209183) FT /note="HMMSmart hit to SM00327, von Willebrand factor (vWF) FT type A domain" FT misc_feature complement(1209916..1210032) FT /note="Signal peptide predicted for DIP1208 by SignalP 2.0 FT HMM (Signal peptide probability 0.986) with cleavage site FT probability 0.474 between residues 39 and 40" FT misc_feature complement(1209928..1209993) FT /note="1 probable transmembrane helix predicted for DIP1208 FT by TMHMM2.0" FT CDS complement(1210064..1210942) FT /transl_table=11 FT /locus_tag="DIP1209" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus fascians hypothetical 34.0 FT kDa protein SWALL:Q9AE56 (EMBL:AJ301559) (304 aa) fasta FT scores: E(): 2.2e-46, 44.91% id in 285 aa" FT /protein_id="CAE49736.1" FT /translation="MRNFDLIRLTEAQWHDRESAHQLRADRLTADHMKRRRAGISHPVY FT DFLFEYYPVRVAHMKKWHPGVGVGIEGNPPHSRWKGYTTIDDVTVVDVEALKKKRSSTL FT HYVSNLLKQTQLNPTHFDCFGLHEWAMVYQTSQPRHALPLRLGAQGSNKVVESHNIRCT FT HFDAFRFFTEPAVPLNFQVLTRENQPSCEQPGCLHAMMDLYKWSAKLGPLIPGDLWLDT FT FELAWDCRVLDMEASPYDCTDYGLGIVPIETAEGKAEYVRRQRELSERGQLLRQRLVAE FT LDRIDRFTLTS" FT CDS complement(1210939..1211991) FT /transl_table=11 FT /locus_tag="DIP1210" FT /product="Putative membrane protein" FT /note="Similar to Rhodococcus fascians hypothetical 40.3 FT kDa protein SWALL:Q9AE57 (EMBL:AJ301559) (380 aa) fasta FT scores: E(): 5.4e-62, 50.28% id in 348 aa, to Streptomyces FT coelicolor putative integral membrane protein SC6D7.04 FT SWALL:Q9RKZ3 (EMBL:AL133213) (347 aa) fasta scores: E(): FT 8.2e-47, 40.93% id in 342 aa, and to Bacillus subtilis FT hypothetical 49.9 kDa protein in citA-sspB intergenic FT region YhdP SWALL:YHDP_BACSU (SWALL:O07585) (444 aa) fasta FT scores: E(): 5.3e-34, 34.48% id in 348 aa" FT /protein_id="CAE49737.1" FT /translation="MSLSSTVLLIVLLLLANAYFVASEFALVSSRKDRIENLIAQGQPR FT AQKVLLSMEHLSIMLAACQFGITICSLILGKVAEPAIAHFIEQPFHSLGLPAHLLHPVS FT FIIALGIITFLHILAGEMVPKNIALAGPETLALWLIPSLLWFMRLTRPIIAVMNWLARI FT SLRAVGIEQKDELDSAVDPDQLVTMLSESRSEGYLDAEEHARLNKALRVEDRSLQEVMI FT PLNKVRSLNFGMRGPLLQELETAVAETGFSRFPVTGKDGSYLGYVHIKDVLDRFDHSSP FT DTIIHRSEIRPLIIVDAAGTMDEALQSMHSKSAHMAQVRDRGLLLGVITLEDLIEEYVG FT TFSDWTHEQS" FT misc_feature complement(1210975..1211133) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(1210978..1211118) FT /note="ProfileScan hit to PS50147, SNF4 repeat." FT misc_feature complement(1211161..1211331) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(1211386..1211982) FT /note="HMMPfam hit to PF01595, Domain of unknown function FT DUF21" FT misc_feature complement(order(1211545..1211610,1211632..1211697, FT 1211758..1211823,1211911..1211976)) FT /note="4 probable transmembrane helices predicted for FT DIP1210 by TMHMM2.0" FT misc_feature complement(1211914..1211991) FT /note="Signal peptide predicted for DIP1210 by SignalP 2.0 FT HMM (Signal peptide probability 0.985) with cleavage site FT probability 0.580 between residues 26 and 27" FT CDS complement(1211988..1213382) FT /transl_table=11 FT /locus_tag="DIP1211" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 48.1 kDa protein Rv1842c or MT1890 or MTCY1A11.02 or FT MTCY359.31 SWALL:YI42_MYCTU (SWALL:Q50592) (455 aa) fasta FT scores: E(): 8.3e-77, 49.55% id in 444 aa, and to FT Myxococcus xanthus hemolysin TlyC SWALL:AAK64446 FT (EMBL:AF377339) (463 aa) fasta scores: E(): 9.4e-38, 34.74% FT id in 449 aa" FT /protein_id="CAE49738.1" FT /translation="MDILLSILSLLGFVLLTASTGLFVAIEFALTSLERSTIETEVKER FT GDKKSRAVQRDYQNLSFVLSGAQLGITITTLATGYLAEPVLAKFLTPLLELMGLEASTS FT VAVALVLALMIATFLSMVFGELLPKNVAITNPMGTARHVVGPVNAFNTVFKGFIKFLNH FT SANWAVRKMGIEPADELATARSTQELTAIVKSSAETGDIDENTALVLDRSLKFGETTAG FT ELMTPRSTVEVLSAEDTVLDLIALAIETGHSRFPVIRGDLDDTIGVVHFKDAFSVPEDQ FT RHVIPLSSIARPVPIIPESLDGDAVLNAVRSAGSQIILVADEYGGTSGLITIEDVVEEI FT LGEVYDEHDDADAERDFNKFGNSWEVSGLARIDEVAKTIGYVAPDGPYETLGGLVMQVL FT GRIPETNDELLLPESDNPALAEFESGYSCRWLAKVSAMEDRRVDKVIISPLQDDEVAQY FT EKEQNS" FT misc_feature complement(1212360..1212521) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(1212546..1212710) FT /note="HMMPfam hit to PF00571, CBS domain" FT misc_feature complement(1212765..1213364) FT /note="HMMPfam hit to PF01595, Domain of unknown function FT DUF21" FT misc_feature complement(order(1213002..1213067,1213137..1213202, FT 1213305..1213370)) FT /note="3 probable transmembrane helices predicted for FT DIP1211 by TMHMM2.0" FT misc_feature complement(1213296..1213382) FT /note="Signal peptide predicted for DIP1211 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.559 between residues 29 and 30" FT CDS complement(1213407..1214765) FT /transl_table=11 FT /locus_tag="DIP1212" FT /product="Putative RNA helicase" FT /note="Similar to Streptomyces coelicolor SC10A5.25c FT protein SWALL:O54116 (EMBL:AL021529) (498 aa) fasta scores: FT E(): 6.5e-63, 46.93% id in 424 aa, and to Escherichia coli FT putative ATP-dependent RNA helicase RhlE or B0797 FT SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): FT 7.6e-44, 36.06% id in 452 aa" FT /protein_id="CAE49739.1" FT /translation="MTSFLDLGLPSGIVQVLSRLGIVDPFPIQEAAIPDAISGRDILGR FT GPTGSGKTFTFGLPMIVRLQESGVSKPSKPRGLILVPTRELAAQVRERLEEPASAMGLR FT VLEVVGGVSIKRHITSLASPVDILVATPGRAQDLINQGKLSLSEVEISTLDEADQMADM FT GFLPQVTKLLELTPKTAQRLFFSATLDGDVNKLVDRFMSDPVTHSTTAVKATVETMSHY FT RFHVGDREARNSIVEKIAGRDGKTIMFMRTKHGVDRQVKKLRRIGINAAGLHGDKGHNT FT RAAALAGFADGSVPVLVATDIAARGIDIDDVDLVVHVDPPAAHKAYVHRAGRTARAGTV FT GKVVTLVMDNQREEVDKLLGKAGVSPVIVDVHADSAELTNITGARKRNGKALQPFGAQQ FT KTSQRGKKQETTAQANQPKRGKSSSFRTRQSKNKRPIATFGGHKKKDGQKGRS" FT misc_feature complement(1213752..1213997) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(1213758..1214537) FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature complement(1214100..1214705) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(1214142..1214723) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature complement(1214607..1214630) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1214868..1216322) FT /transl_table=11 FT /gene="gnd" FT /locus_tag="DIP1213" FT /product="6-phosphogluconate dehydrogenase, FT decarboxylating" FT /EC_number="1.1.1.44" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT 6-phosphogluconate dehydrogenase, decarboxylating MT1892 FT SWALL:AAK46163 (EMBL:AE007047) (483 aa) fasta scores: E(): FT 1e-123, 69.32% id in 476 aa, and to Escherichia coli FT 6-phosphogluconate dehydrogenase, decarboxylating Gnd or FT B2029 SWALL:6PGD_ECOLI (SWALL:P00350) (468 aa) fasta FT scores: E(): 3.1e-90, 53.2% id in 468 aa" FT /protein_id="CAE49740.1" FT /translation="MTDQTQLAQIGIVGLAVMGSNLARNFAHKGHTVAVFNRSFEKTQA FT LMDQHGDEGNFIPSATIEEFVASLEKPRRAIIMVQAGPATDAVINQLADAMDEGDIIID FT GGNALYTDTIRRESEIAQRGLNFVGAGISGGEEGALNGPSIMPGGPDKSWEALGPLLES FT IAAQVGGTPCVTHIGPDGAGHFVKMVHNGIEYADMQVIGEAYQLLRYATEMQPSEIADV FT FKTWNQGDLDSYLIEITSEVLAQVDSETGTPLIDLIVDEAGQKGTGRWTVKAALDLGIA FT TTGIGEAVFARALSGATTQRKAAQGNLPAGTLESLASLNIDKDQFVEDVRRALYASKLV FT AYAQGFDEIIAGSAEHNWDVDPRDLATIWRGGCIIRAKFLNRIVEAYDANPELPSLLLD FT PYFKTELESLIDSWRRVVVAATQLGLPVPVFASSLSYYDSLRAERLPAALIQGQRDFFG FT AHTYRRTDKDGSFHTLWSGDRSEVEA" FT misc_feature complement(1214931..1216277) FT /note="HMMPfam hit to PF00393, 6-phosphogluconate FT dehydrogenase" FT misc_feature complement(1215162..1215230) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(1215480..1215563) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(1215513..1215551) FT /note="ScanRegExp hit to PS00461, 6-phosphogluconate FT dehydrogenase signature." FT misc_feature complement(1215723..1215809) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(1215876..1215953) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(1216023..1216112) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT misc_feature complement(1216230..1216301) FT /note="FPrintScan hit to PR00076, 6-phosphogluconate FT dehydrogenase signature" FT CDS 1216431..1216889 FT /transl_table=11 FT /locus_tag="DIP1214" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 15.1 kDa protein Rv1847 or MT1895 or MTCY359.26c FT SWALL:YI47_MYCTU (SWALL:P95162) (140 aa) fasta scores: E(): FT 1.6e-08, 34.67% id in 124 aa, and to Pseudomonas aeruginosa FT hypothetical protein PA1618 SWALL:YG18_PSEAE (SWALL:Q9I3A4) FT (145 aa) fasta scores: E(): 2e-05, 32.82% id in 131 aa" FT /protein_id="CAE49741.1" FT /translation="MLKSSNVEGLSIEQLEEFNEKLEGFSKTLGLRFTQINSEGVHAEL FT PVAAEHLQVSGVVNGGVYSALAETAGSIASVVAADGAMAVGVHCATDFLGMVHAGVIDV FT SAEIIHRGRTTHVVAVDMHHRGKLVARATLRTLLVAPQPEKRQKDKMA" FT misc_feature 1216485..1216847 FT /note="HMMPfam hit to PF02584, Uncharacterized protein FT PaaI, COG2050" FT CDS complement(1216886..1217986) FT /transl_table=11 FT /locus_tag="DIP1215" FT /product="Putative magnesium and cobalt transport protein" FT /note="Similar to Mycobacterium tuberculosis putative FT magnesium and cobalt transport protein CorA or Rv1239c or FT MT1277 or MTV006.11c SWALL:O50455 (EMBL:AL021006) (366 aa) FT fasta scores: E(): 1.9e-59, 43.45% id in 359 aa, and to FT Escherichia coli magnesium and cobalt transport protein FT CorA or B3816 or Z5333 or ECS4746 SWALL:CORA_ECOLI FT (SWALL:P27841) (316 aa) fasta scores: E(): 3e-05, 24.03% id FT in 312 aa" FT /protein_id="CAE49742.1" FT /translation="MNEKNRQLPAFTPRNRRTHPISAERKQLGVDDIVDHCMIYVDGRA FT IQGWFDYGSGLKRVKDFIASGHKAFMWLSLEEPSEQHMMQVADDLHIHELIVEDAVTAH FT QRPKVERYDDQIFMVVRSVFYRDHETVDDANEIIKTGEVQMLIGEHFIITIRHRTPMPD FT LTMRLDDPQEISSYGPMIIAWAWADYLVDGYLRIVNILAEEVDELEEEVFTPGSSFNIE FT HIYMIKREILEMRHAIDPLAPALRMLVTQHKDMIAKQLRSYLRDVLDHEMVAKDYVANF FT DERLSSLIDAGVAKISLQQNSDMRAISAYVGMAAVPTLIAGIYGMNFENMPELATNYGY FT YIVILVMVLTVSLMWWYFRKMNWIGN" FT misc_feature complement(1216895..1217794) FT /note="HMMPfam hit to PF01544, CorA-like Mg2+ transporter FT protein" FT misc_feature complement(order(1216913..1216972,1217003..1217068)) FT /note="2 probable transmembrane helices predicted for FT DIP1215 by TMHMM2.0" FT CDS 1217993..1218622 FT /transl_table=11 FT /locus_tag="DIP1216" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Agrobacterium tumefaciens StrC58 FT AGR_C_2998p SWALL:AAK87404 (EMBL:AE008084) (321 aa) fasta FT scores: E(): 2.8e-06, 31.33% id in 150 aa, and to Rhizobium FT meliloti hypothetical protein RB0059 or SMB20059 FT SWALL:CAC48459 (EMBL:AL603642) (259 aa) fasta scores: E(): FT 6.5e-05, 28.67% id in 143 aa" FT /protein_id="CAE49743.1" FT /translation="MQTSFCVLVSIIERMPTWNDIKVRNPQHSHNYAKRWENLEAEGND FT INGEARLIDALVQRGSKILDAGCGQGRVGGYLSARGHIVTGIDIDDYLISEAEKKFPSA FT TWHVGDLGSESIPDQGFDIAVCAGNVITFIEPDKQEAALAHIFEALRPNGRCIIGFGAG FT RGYVFPQFFEDARNVGFVIENNFESWGLNPLTNRSQFLVAFLRKPE" FT misc_feature 1218158..1218475 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 1218353..1218478 FT /note="ProfileScan hit to PS50124, Generic FT methyl-transferase profile." FT misc_feature 1218566..1218580 FT /note="Putative sortase B anchoring signal. NPQTN - NPLTN" FT CDS complement(1218699..1220063) FT /transl_table=11 FT /gene="ndh" FT /locus_tag="DIP1217" FT /product="NADH dehydrogenase" FT /EC_number="1.6.99.3" FT /note="Similar to Corynebacterium glutamicum NADH FT dehydrogenase Ndh SWALL:Q9X710 (EMBL:AJ238250) (467 aa) FT fasta scores: E(): 2.7e-137, 78.71% id in 451 aa, and to FT Escherichia coli NADH dehydrogenase Ndh or B1109 FT SWALL:DHNA_ECOLI (SWALL:P00393) (433 aa) fasta scores: E(): FT 4.9e-20, 27.08% id in 443 aa" FT /protein_id="CAE49744.1" FT /translation="MTNTPFRPEGGRHHVVVIGSGFGGLFAVQNLKDADVDITLIDRTN FT HHLFQPLLYQVATGILSSGEIAPQTRQVLAQQNNVHVLKAEVTDIDTESKTVVADLDDY FT SKTIEYDSLIVAAGAGQSYFGNDHFAEFAPGMKTIDDALELRARIIGAFERAEMCEDPK FT ERERLLTFVIVGAGPTGVELAGQLAEMAHRTLSGEYTQFTPSNAKIILLDGAPQVLPPF FT GKRLGRTAQRELEKIGVTVKLNAIVTGVDENSVTYKSTVDDSLHTIDSFCKIWSAGVAA FT SPLGKLVAEQLGVEVDRAGRVPVNEDLSVGDDKNVFVIGDMMSLNRLPGVAQVAIQGGE FT YVAEQIAAGVEGRSSSERPAFEYYDKGSMATVSRFNAVVKLGKVEVTGFIGWVMWLLVH FT LMFLVGFRNRATAAFSWGINALSRKRWNLATTRQQLHGRTGLQKLTALVDTAEKK" FT misc_feature complement(1218846..1218911) FT /note="1 probable transmembrane helix predicted for DIP1217 FT by TMHMM2.0" FT misc_feature complement(1219071..1220024) FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreductase" FT misc_feature complement(1219095..1219118) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature complement(1219479..1219556) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT misc_feature complement(1219935..1220021) FT /note="ProfileScan hit to PS50205, NAD binding site." FT misc_feature complement(1219956..1220024) FT /note="FPrintScan hit to PR00368, FAD-dependent pyridine FT nucleotide reductase signature" FT /note="FPrintScan hit to PR00411, Pyridine nucleotide FT disulphide reductase class-I signature" FT CDS 1220241..1221536 FT /transl_table=11 FT /locus_tag="DIP1218" FT /product="Conserved hypothetical protein" FT /note="Low similarity to Mycobacterium tuberculosis FT putative cyclopropane fatty acid synthase UfaA1 or Rv0447c FT or MT0463 or MTV037.11C SWALL:O53732 (EMBL:AL021932) (427 FT aa) fasta scores: E(): 2.2e-13, 27.14% id in 431 aa, and to FT Agrobacterium tumefaciens StrC58 AGR_C_3601p SWALL:AAK87737 FT (EMBL:AE008115) (410 aa) fasta scores: E(): 5.1e-06, 21.91% FT id in 356 aa" FT /protein_id="CAE49745.1" FT /translation="MNVNDQRARINADRWPNIALVPQGRRIEVKARKAESEFAAICEKA FT RIQLFGDAPDVIVREDSLFKRIAAAGWLGVAESYMAGEWYAENLVDVLKKLIAVGYHPK FT MPKLDLGGDYSGMEVDTQLIKLFSGDGMSIQGTLFSSGVPTTERIAVRSYVKGAGRANE FT PATHFVDQTTLSDPTLVEKADLGAGQLRSTTALLDSAGVHAGTHLLDFPSSGGALAINA FT CHRGATVDALTTDLDFATDIREILDLANVEGSAHVELIDDPIPAPKARPTQYDVITSVE FT KLELMQPGMKKRYVQAIDRMLAVGGAFACQSVVLNEEKADIATAAMSVHKAYVWPAFSP FT MRLSDMHKLVDRFTNLRIISQTHFPGHYQAGLRLQRETFEGNIRQAAADGFDVVYRRLW FT IYQLAMREALFIAGAVDAVQCVATTRHRRGGR" FT CDS complement(join(1221555..1221791,1221793..1222014)) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1219" FT /product="Putative oxidoreductase (pseudogene)" FT /note="Pseudogene. Similar to Streptomyces coelicolor FT putative oxidoreductase SC5F1.26 SWALL:Q9F3A3 FT (EMBL:AL450165) (998 aa) fasta scores: E(): 2.5e-23, 48.05% FT id in 154 aa, and to Pseudomonas aeruginosa probable FT ferredoxin PA4772 SWALL:Q9HV36 (EMBL:AE004890) (938 aa) FT fasta scores: E(): 2.3e-14, 35.33% id in 150 aa. Presents a FT frameshift at residue 74 and lacks stop codon" FT CDS 1222345..1223313 FT /transl_table=11 FT /locus_tag="DIP1221" FT /product="Putative sodium-dependent transport membrane FT protein" FT /note="Similar to Salmonella typhimurium putative FT Na+-dependent transporter STM4195 SWALL:AAL23019 FT (EMBL:AE008896) (313 aa) fasta scores: E(): 8e-40, 41.43% FT id in 292 aa, and to Bacillus halodurans sodium-dependent FT transporter BH0858 SWALL:Q9KEJ4 (EMBL:AP001510) (323 aa) FT fasta scores: E(): 1.1e-38, 41.29% id in 293 aa" FT /protein_id="CAE49747.1" FT /translation="MVDSHEKQRGDTGEVTTEDRSSAIAVLVFPVLMIVGAIIAYQTPE FT TFVGFKPYLNPMLMFIMFAMGLTITLPDLKELARRPWSIALGVVCQFIVMPLSAVAISS FT ILGFDQSLTIGLILLGSVPGGTASNVLAYLAKGDVALSVAMTSVSTLVSPFATPLIMLL FT LAGESAEVNASGMMVILLKTVLIPVGFGLILRFFAQRFVDTVLPVLPWLSIVVIGIVMM FT TVVAGAHAKLALVGIVVVLGVAIQNLIGFIAGYWSARAVRQPEASCRTASIEVATQNSG FT LAASMATQFFTPEAALPGAVATIYANISGAIYAAIVRRKAL" FT misc_feature order(1222405..1222473,1222501..1222560,1222597..1222665, FT 1222678..1222746,1222759..1222827,1222870..1222938, FT 1222957..1223025,1223038..1223106,1223227..1223295) FT /note="9 probable transmembrane helices predicted for FT DIP1221 by TMHMM2.0" FT misc_feature 1222507..1223046 FT /note="HMMPfam hit to PF01758, Sodium Bile acid symporter FT family" FT CDS complement(1223713..1223895) FT /transl_table=11 FT /locus_tag="DIP1222" FT /product="Putative secreted protein" FT /note="No significant database matches" FT /protein_id="CAE49748.1" FT /translation="MAHRMIPALWLRIIVLIAFMAYMVQQSLPWLALIAGAFALLTGLQ FT LWVAYRSKKDDRNFS" FT misc_feature complement(order(1223746..1223811,1223824..1223874)) FT /note="2 probable transmembrane helices predicted for FT DIP1222 by TMHMM2.0" FT misc_feature complement(1223785..1223895) FT /note="Signal peptide predicted for DIP1222 by SignalP 2.0 FT HMM (Signal peptide probability 0.689) with cleavage site FT probability 0.401 between residues 37 and 38" FT CDS complement(1223913..1224611) FT /transl_table=11 FT /locus_tag="DIP1223" FT /product="Putative secreted protein" FT /note="Low similarity to Xylella fastidiosa hypothetical FT protein XF1327 SWALL:Q9PDQ2 (EMBL:AE003965) (189 aa) fasta FT scores: E(): 0.14, 25.23% id in 210 aa, and to Streptomyces FT coelicolor hypothetical 28.6 kDa protein 2SC10A7.34c FT SWALL:Q9ADM8 (EMBL:AL583945) (273 aa) fasta scores: E(): FT 0.23, 25.11% id in 215 aa" FT /protein_id="CAE49749.1" FT /translation="MDKKQKPIIIGTFIAVAVLAIVAVAIALIPLLTNPGVKTEQVDTS FT NAQPASTDIDGEWSVTYGKAPNISSAGFTFHEVLPGDKRITSGSTRSVSGNVSVQNSHL FT TSGTVTIDMADIHTDNQKRDTNVRSKIFETAKYPEASYEISQAVDLSAVPSDGTSIELK FT IPGKLTIHGVTRDVTPDFTIIRDGNTVKVSTTIPINRLDFNVHTPEFVAAKIDENGEIN FT VLLNLEKSGS" FT misc_feature complement(1224486..1224611) FT /note="Signal peptide predicted for DIP1223 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.639 between residues 42 and 43" FT misc_feature complement(1224525..1224590) FT /note="1 probable transmembrane helix predicted for DIP1223 FT by TMHMM2.0" FT CDS complement(1224625..1224966) FT /transl_table=11 FT /locus_tag="DIP1224" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT hypothetical 13.2 kDa protein MT2109 SWALL:AAK46388 FT (EMBL:AE007062) (120 aa) fasta scores: E(): 5e-15, 43.92% FT id in 107 aa" FT /protein_id="CAE49750.1" FT /translation="MIWRMPTKRIPTCAWCGKELNSNGRGRPKKFCSQSCRQRAYEQRH FT GSGAKTALPEGAVVLVPEKVDNLRDALYELRCSAEDIATAADEGISVEDMKELCAELVS FT LAKKIERLR" FT CDS 1225219..1225608 FT /transl_table=11 FT /locus_tag="DIP1225" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 13.0 kDa protein Rv2050 or MTV018.37 SWALL:O53492 FT (EMBL:AL021899) (111 aa) fasta scores: E(): 6.5e-28, 70% id FT in 110 aa, and to Mycobacterium leprae hypothetical protein FT ML1439 SWALL:Q9CC05 (EMBL:AL583922) (111 aa) fasta scores: FT E(): 2.9e-27, 68.18% id in 110 aa" FT /protein_id="CAE49751.1" FT /translation="MADRVLRGSRMGAVSYETDRDHDLAPRQMVCYKTETGEIFDVPFA FT HDAEIPSEWLCKNGQLGILMEGEGVEAKPVKPARTHWDMLRERRSLEELDVLLEERIEM FT LRKRRRNAARLLKQQQEEAAAAQNS" FT stem_loop complement(1225631..1225672) FT /note="Score 57: 19/19 (100%) matches, 0 gaps" FT CDS complement(1225684..1226487) FT /transl_table=11 FT /gene="ppm1" FT /locus_tag="DIP1226" FT /product="Putative polyprenol phosphate mannosyl FT transferase 1" FT /note="Similar to Mycobacterium smegmatis putative FT polyprenol phosphate mannosyl transferase 1 Ppm1 FT SWALL:Q9F408 (EMBL:AJ294477) (265 aa) fasta scores: E(): FT 1.6e-56, 61.6% id in 237 aa, and to Schizosaccharomyces FT pombe dolichol-phosphate mannosyltransferase Dpm1 or FT SPAC31G5.16c SWALL:O14466 (EMBL:AF007873) (236 aa) fasta FT scores: E(): 1.2e-24, 39.54% id in 220 aa" FT /protein_id="CAE49752.1" FT /translation="MPMPSEKTLVIIPTYNELENLPLITGRVRKANPNVDILIVDDNSP FT DGTGEAADALAASDSHIKVLHREGKGGLCGAYVAGFQWGLERDYTVLCEMDADGSHAPE FT QLHLLLAQVDNGADLVIGSRYVPGGKVVNWPKNRWVLSKGGNIYISLALGAGLSDMTAG FT YRAFRREVLETVDLNELSNAGYIFQVDMAWRVIQLGFDVREVPITFTEREIGESKLDGS FT FVKDSLLEVTKWGIHHRKEQITNLYTESSRLIRHEISSFRKKHLI" FT misc_feature complement(1225960..1226463) FT /note="HMMPfam hit to PF00535, Glycosyl transferase" FT misc_feature complement(1226158..1226469) FT /note="ProfileScan hit to PS50167, General FT Glycosyltransferase domain." FT CDS complement(1226513..1228072) FT /transl_table=11 FT /locus_tag="DIP1227" FT /product="Putative transferase/membrane protein" FT /note="Similar to Streptomyces coelicolor putative FT transferase 2SCG2.28c SWALL:Q9EX26 (EMBL:AL445963) (537 aa) FT fasta scores: E(): 2.4e-42, 37.71% id in 517 aa, and to FT Escherichia coli apolipoprotein N-acyltransferase Lnt or FT CutE or B0657 SWALL:LNT_ECOLI (SWALL:P23930) (512 aa) fasta FT scores: E(): 1.6e-19, 25.89% id in 533 aa" FT /protein_id="CAE49753.1" FT /translation="MNRISSQAARVLLTRFAAAIVAALLVFSSYQPLGWYLCAPIGIAL FT LLWSLAPWHSECLSSRMSTLIAIVHSATLFLLLLPWIGEFVGAMPYIALSIFLSLYSIL FT WGAPLAKLLSTRKGWITAPFVLLAVEWLRSNYPFGGFAWVRLAWGQIGGPLAPLAAWGG FT PALVSFATVLVGALIFALLQRTNTRLALTISAIMSIVTASAWFNLSSSESQESTGQHQV FT TVAAVQGNVPRLGLDFNAQRRAVLANHVQETRKLTEQVDFIVWPENSSDVDPFADVRAR FT NLINSAVASVQAPIVVGTVTTDEVGARNAMVVFDPETGEGDWHVKKFLQPFGEWMPWRD FT FFRKFSSLVDLAGDFKPGEGSGVVRVHAAQLGETVKLGISTCYEVAFDQAGRDAVLAGA FT QILATPTNNATFGFTDMTYQQLAMSRMRAIELDRAVVVAATSGVSAIVTPRGEVLQHSK FT IFESATLVQSLPLKETITFSARYGTLLEKVLVIIGTLCAVSALAIRRKMPQASSRAPRK FT KN" FT misc_feature complement(order(1226564..1226629,1227455..1227505, FT 1227527..1227592,1227638..1227703,1227743..1227808, FT 1227824..1227880,1227920..1227973,1227986..1228036)) FT /note="8 probable transmembrane helices predicted for FT DIP1227 by TMHMM2.0" FT misc_feature complement(1226618..1227412) FT /note="HMMPfam hit to PF00795, Carbon-nitrogen hydrolase" FT misc_feature complement(1226654..1227010) FT /note="ProfileScan hit to PS50263, FT Nitrilase/cyanide-hydratase/amidase catalytic domain FT (active site Cys)" FT misc_feature complement(1227989..1228072) FT /note="Signal peptide predicted for DIP1227 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.556 between residues 28 and 29" FT CDS complement(1228082..1228612) FT /transl_table=11 FT /locus_tag="DIP1228" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 18.1 kDa protein Rv2053c or MTV018.40c or MTCY63A.07 FT SWALL:O53495 (EMBL:AL021899) (175 aa) fasta scores: E(): FT 0.00056, 29.07% id in 172 aa, and to Rhizobium meliloti FT hypothetical transmembrane protein R00007 or SCM02787 FT SWALL:CAC41394 (EMBL:AL591782) (191 aa) fasta scores: E(): FT 0.044, 29.06% id in 117 aa" FT /protein_id="CAE49754.1" FT /translation="MRLYFALPYLLIEALAFWGVSRWLGTGVALILLFVCLFGGLILAA FT WEMQNISRKLSRGTASAGRAVGDLGLIGAGAMGVAMPGFVTSIAGLLLIFTPTRALVRN FT LLAKKLRTKIEELGAKSFEATNAYRQQAHYGSFAQPNTSEVIDEEEIQSWTRNLKPEDF FT GSDDSGSNDSGRK" FT misc_feature complement(order(1228331..1228396,1228475..1228540)) FT /note="2 probable transmembrane helices predicted for FT DIP1228 by TMHMM2.0" FT CDS complement(1228651..1232283) FT /transl_table=11 FT /gene="cobN" FT /locus_tag="DIP1229" FT /product="Putative cobalamin biosynthesis related protein" FT /note="Similar to Mycobacterium tuberculosis CobN or FT Rv2062c or MT2121 or MTCY49.01c or MTV019.03 SWALL:AAK46401 FT (EMBL:AL021922) (1195 aa) fasta scores: E(): 0, 62.22% id FT in 1215 aa, and to Methanococcus jannaschii hypothetical FT protein MJ0908 SWALL:Q58318 (EMBL:U67534) (1232 aa) fasta FT scores: E(): 5.1e-109, 36.48% id in 1258 aa" FT /protein_id="CAE49755.1" FT /translation="MITLLSTSDTDLLSAKAATTQSEVEFQYFNPNYVNEEKLGELIAT FT TDIFVVRLLGGKRAWEAGLDTLLSTHIPVIAVSGELAVDAELTELSTAPAGVVTTAHTY FT LAEGGATNLANLHNFLSDTLLLTGLGFDQPQHMPSWGFLDSTAHQNRFESSLPKIGIIY FT YRAQHIAGNTAYITELANAIAAQGAVPVPIFSASLRQASEDLLAELSTCDALITTVLAA FT GGTKPAAAGAGAGGDDEAWDVAKLAALDIPIIQGLALTNSKSDWNDNDEGLSPLDVATQ FT IAVPEFDGRLITVPFSFKEYDEDGLIAYVPDTERCARLAGIAVRHAQLRKKENKDKKLV FT LMLSAYPTKHARIGNAVGLDTPLSTLRVLEALHSAGYNIGDPTNIPGYSTEGDHDGDAL FT MHAIIAAGGHDPEWLTQDVLDNNPLKLAKDDYLAFFATLPSAMQEEMTEHWGEAPGTHY FT VNPKTHELYIAGLQFGNIVVMVQPPRGFGENPVGIYHDPDLPANHHYLGVYFWLREKFH FT ADAIVHMGKHGNMEWLPGKNAGLSPECYPDQAIADLPLIYPFLVNDPGEGTQAKRRAHA FT TLVDHMIPPMARAETYGDITRLEQLLDEHATIAAMDPAKLPAIRQEIWTLLQAAKMDRD FT LGWDERPDEDAFDDKMMEIDGWLCEIKDAAIRGGLHILGEKVTGEIRVELVLAMLRARQ FT LWGGEEAIPGLRESLGLSEAGDENRHRVDHIENIAHGMLTRLEENNWDPTAVAEIVDNA FT ELPDDANRAGVTALLIFACNEIIPRLEQTSREIDQILRALDGRFIEAGPSGSPMRGLVN FT VLPTGRNFYSVDPKSLPSRLAWETGQLLADSLVQRYRDEHDGQYPKSVGLSVWGTSAMR FT TSGDDIAEVFALLGVRPVWDEASRRVVDLEVISLEELGRPRIDTTVRISGFFRDAFPHV FT LALIDDAVQLVSQLDEPAEQNFIRAHMMSDQHDHNLPVRRIFGSKPGTYGAGLLELIES FT GNWRDNQDLAEVYTNWGGYAYGRGVNGVKAHEEMRNAYRRIQVAAKNVDSKEHDIADSD FT DYFQFHGGMVATVRALTGSDPEAYIGDSTRQETVKTRTLHEESRRVFRARVVNPRWIEA FT MRRHGYKGAFEMSATVDYLFGYDATTGLMDDWMYETLTDTYVKDPSNREFFEKSNPWAL FT RDISERLLEAADRGLWENPTAEALDTLRNTFLEMEGNLEEGTQN" FT misc_feature complement(1228894..1231809) FT /note="HMMPfam hit to PF02514, CobN/Magnesium Chelatase" FT misc_feature complement(1231057..1231089) FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT CDS 1232340..1232477 FT /transl_table=11 FT /locus_tag="DIP1230" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49756.1" FT /translation="MAYVLFQNTSFKGKASRLWSDCNNGATVRVFTEFTTVIFILESVL FT " FT misc_feature 1232346..1232393 FT /note="ScanRegExp hit to PS00225, Crystallins beta and FT gamma 'Greek key' motif signature." FT CDS 1232650..1233843 FT /transl_table=11 FT /locus_tag="DIP1231" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT CobG-related protein MT2124 SWALL:AAK46404 (EMBL:AE007063) FT (363 aa) fasta scores: E(): 5.1e-43, 39.56% id in 369 aa" FT /protein_id="CAE49758.1" FT /translation="MTTMSAMTFQKSADVKSAAVLIAHPDRSRSDMCPGALKLHHANDG FT AIGRVRFPGGRVRASQWEDIARISDELGDGSIHITTRGNMQFRGVSDEAAFADVVEAAG FT FLPSRRHDKIRNILCSPLSPELWTFTDDLDQCLQENDVVAGLSGRTLFGFDAGSGDIVS FT QNPDFGVVYVDGAYQLILGGKTTSVAIADSDEVATILTAAAEIWQNMREIEWRLHESPV FT ARQRIAEELHERFDVVRREVAVPRAQGSARPIGWISADDGTVTLGAGLRFGFLTSKVAR FT ILAAVGTDTSITPWASLVIHGLKEDEAEAVTKVLAPQGLIFDAHSPWLKVTACTGLPGC FT QKSLTNTQQDATTLVQSGDEINGLVHFSGCDRRCGHPLSHHTEYVAVGDGEYEVSER" FT misc_feature 1233634..1233816 FT /note="HMMPfam hit to PF01077, Nitrite and sulphite FT reductase 4Fe-4S domain" FT CDS 1233840..1234490 FT /transl_table=11 FT /gene="cobH" FT /locus_tag="DIP1232" FT /product="precorrin-8X methylmutase" FT /EC_number="5.4.1.2" FT /note="Similar to Pseudomonas denitrificans precorrin-8X FT methylmutase CobH SWALL:COBH_PSEDE (SWALL:P21638) (210 aa) FT fasta scores: E(): 1e-40, 59.9% id in 207 aa, and to FT Streptomyces coelicolor putative precorrin-8X methylmutase FT SCE39.32 SWALL:Q9X8F5 (EMBL:AL049573) (218 aa) fasta FT scores: E(): 8.2e-44, 62.08% id in 211 aa" FT /protein_id="CAE49760.1" FT /translation="MSFEYITDGNEIYRQSFAMIREESDLSRFDDEQAQIAVRMIHAAG FT EVDLAEDIELSTDVVNTARDALRRGAPILTDVNMVKSGVTRKRLPADNEVICLLNEPRS FT VELARKLGTTRSAAAVELWEPHIAGAVVAIGNAPTALFHLLNWLAEDPQRPRPAAILGI FT PVGFVGAAESKAALANVAHDLGVEFVTVHGRRGGSAITCAAINALATEKEILP" FT misc_feature 1233864..1234478 FT /note="HMMPfam hit to PF02570, Precorrin-8X methylmutase" FT CDS 1234487..1235983 FT /transl_table=11 FT /gene="cobIJ" FT /locus_tag="DIP1233" FT /product="Putative bifunctional cobalamin biosynthesis FT protein" FT /EC_number="2.1.1.130" FT /note="Similar to Mycobacterium tuberculosis cobalamin FT biosynthesis protein [includes: precorrin-2 C20- FT methyltransferase; precorrin-3 methylase] CobIJ or Rv2066 FT or MT2126 or MTCY49.05 SWALL:COBI_MYCTU (SWALL:Q10677) (508 FT aa) fasta scores: E(): 3.6e-88, 50.7% id in 495 aa, FT C-terminal region to Rhodobacter capsulatus precorrin-3 FT methylase SWALL:O68097 (EMBL:AF010496) (245 aa) fasta FT scores: E(): 1.1e-34, 48.14% id in 243 aa, and N-terminal FT region to Pseudomonas aeruginosa precorrin-2 FT methyltransferase CobI or PA2904 SWALL:Q9HZU3 FT (EMBL:AE004716) (250 aa) fasta scores: E(): 1.4e-33, 43.3% FT id in 254 aa" FT /protein_id="CAE49762.1" FT /translation="MTAVTAGKLIGVGVGPGDPELLTVKAVKAIKSADVIVFHAKPNGQ FT SAAHRIAESYIRQDQVLELLEYPVTTGVTEHPGGYAGAMAAFYASVGERLRDHLIEGKN FT VVVLALGDPMLYSSYQHIHRLLSEDFNAEIIPGIPSITSAADVLGKPLCEDDDVLTILP FT GTLPHSELVARLSDSDGAVVMKLGRTFDKVRKAMIEAGVADRAHVVVRVGMADQHSVPV FT MEADPQAIPYFSVAVVPSITDTNGDSGDKQQGEVVVVGLGPGGHRWTTPEVMAELKQAT FT DIVGYSTYVNRVPQQAGQRRHLSDNKVEAERAAMALDMAKQGRKVAVVSSGDPGVFAMA FT AAVLETADDDQWREVPVRIIPGMTAAQAVASRVGAPLGHDFGMISLSNRLKPFEIVEKR FT IRALASADMAFACYNPASKERRWQVARMKEIVSEYQAGSTPVIVARAVGSDQETVTVTT FT LEDFDPDIVDMRTMVIIGASTTKTYQGGDGVRVFTSRWYT" FT misc_feature 1234508..1235164 FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT misc_feature 1234799..1234897 FT /note="ScanRegExp hit to PS00840, Uroporphyrin-III FT C-methyltransferase signature 2." FT misc_feature 1235249..1235875 FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT stem_loop 1235998..1236050 FT /note="Score 62: 22/23 (95%) matches, 0 gaps" FT CDS complement(1236065..1236796) FT /transl_table=11 FT /gene="cobK" FT /locus_tag="DIP1234" FT /product="precorrin-6X reductase" FT /EC_number="1.3.1.54" FT /note="Similar to Rhodococcus erythropolis precorrin-6X FT reductase CobK SWALL:COBK_RHOER (SWALL:Q53139) (248 aa) FT fasta scores: E(): 1.6e-41, 50% id in 244 aa, and to FT Mycobacterium tuberculosis precorrin-6X reductase CobK or FT Rv2070c or MT2130 or MTCY49.09c SWALL:COBK_MYCTU FT (SWALL:Q10680) (244 aa) fasta scores: E(): 1.2e-36, 47.54% FT id in 244 aa" FT /protein_id="CAE49763.1" FT /translation="MRALILGGTGEGRDVAAILHVAGWRVTSSLAGRVSNPKLPVGEVR FT IGGFGGPAGLTQWLLREGVEVIIDATHPFAERISASAAEASRATGIPLIALHRPEWKPR FT PRDRWIPVTSMQEAADKAARDYHHIFLTIGRQQLAPFAHDAHNLYVVRAVEPPQVALPQ FT RHRLILSRGPFTLESEKKLMIDNQIDCVVTKNSGGPLTHAKLDAARDLGIDVVMVQRPQ FT LPKVTHVATSAAEVAEIIDSL" FT misc_feature complement(1236071..1236796) FT /note="HMMPfam hit to PF02571, Precorrin-6x reductase FT CbiJ/CobK" FT CDS complement(1236784..1237557) FT /transl_table=11 FT /gene="cobM" FT /locus_tag="DIP1235" FT /product="precorrin-4 C11-methyltransferase" FT /EC_number="2.1.1.133" FT /note="Similar to Pseudomonas denitrificans precorrin-4 FT C11-methyltransferase CobM SWALL:COBM_PSEDE (SWALL:P21922) FT (253 aa) fasta scores: E(): 5.4e-46, 55.37% id in 251 aa, FT and to Rhodococcus erythropolis precorrin-4 FT C11-methyltransferase CobM SWALL:COBM_RHOER (SWALL:Q53138) FT (249 aa) fasta scores: E(): 3.4e-57, 61.04% id in 249 aa" FT /protein_id="CAE49764.1" FT /translation="MTVYFIGAGPGAADLLTLRAHNIIKSAQVCMYAGSIVPPEVLESV FT PQNAEVINTARMPLDQIMEKIVAAHKNGHDVARLQSGDPSIYSAVAEQARRLTALGIDY FT QIVPGVPAFAAVAAALGHELTVPTVGQTVILTRVSGRASAMPQGEDLPTLGKSGATLCI FT HLAAHDIDRVVSELLPQYGEYCPAAVVAYASRPEEAIVRGTLADIAEKTRSAEITRTAI FT IVVGKVLGAEGFPDSFLYSNDRPRDEHGRTIPCAH" FT misc_feature complement(1236931..1237554) FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT misc_feature complement(1237231..1237332) FT /note="ScanRegExp hit to PS00840, Uroporphyrin-III FT C-methyltransferase signature 2." FT misc_feature complement(1237498..1237542) FT /note="ScanRegExp hit to PS00839, Uroporphyrin-III FT C-methyltransferase signature 1." FT CDS complement(1237585..1238832) FT /transl_table=11 FT /locus_tag="DIP1236" FT /product="Putative precorrin-6Y C5,15-methyltransferase" FT /note="Similar to Mycobacterium tuberculosis precorrin-6Y FT C5,15-methyltransferase [decarboxylating] CobL or Rv2072c FT or MT2132 or MTCY49.11c SWALL:COBL_MYCTU (SWALL:Q10671) FT (390 aa) fasta scores: E(): 5.8e-57, 44.22% id in 398 aa, FT and to Pseudomonas denitrificans precorrin-6Y FT C5,15-methyltransferase [decarboxylating] CobL FT SWALL:COBL_PSEDE (SWALL:P21921) (413 aa) fasta scores: E(): FT 1.5e-47, 39.5% id in 405 aa" FT /protein_id="CAE49765.1" FT /translation="MGRSKNDDGQAHTGSITVVGIGAGGVEELGAQARTALRQATIIIG FT SKRQLGLLPEDFQGDRIAWPSPLVPAIPALFAEFIDKEVVVLGSGDPMFHGIGSTLHRL FT LPNHSMTVIPQPSSASLACARLGWALDTTSVYSLVTHPIAHLTLAIEQGDRFLVLGRNH FT ESPHEICEHLISLGQSTAEVTVLSDIGSVSETITSGAATDYPSNDSALNVIAIRPLAAT FT RSRVPGLPDSEYVTDGQLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQ FT TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTAPG FT VFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISSFAISHEHTVGSFITMKPA FT LPVHQWTVVKALTKEL" FT misc_feature complement(1237753..1238073) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature complement(1238218..1238790) FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylases." FT CDS complement(1238888..1239652) FT /transl_table=11 FT /locus_tag="DIP1237" FT /product="Putative oxidoreductase" FT /note="Similar to Mycobacterium tuberculosis putative FT oxidoreductase Rv2073c or MT2133 or MTCY49.12c FT SWALL:YK73_MYCTU (SWALL:Q10681) (249 aa) fasta scores: E(): FT 1.3e-38, 46.82% id in 252 aa, and to Streptomyces FT coelicolor putative short-chain dehydrogenase SC5G8.09c FT SWALL:Q9KZA5 (EMBL:AL353872) (256 aa) fasta scores: E(): FT 3.1e-27, 37.94% id in 253 aa" FT /protein_id="CAE49766.1" FT /translation="MEKVTETVVIVGASSEIAGRIAINLACNRDFVLLARQSERLTTRG FT GLMSVLKELGARSVEVREFNATDFTSIRPIISQIPRIDHAVVSFGILGDQNKAESDEAH FT AAEIATIDYTSQIVALTVLADIMKRQTHTSTITVFSSIAGWRPRRANYVYGSTKAGLDA FT FSQGLADSLHGSSVKMIIARPGFVIGHMTRGMKPAPMSVTPNIVAEAICSAITRSTKEK FT STSTTLWIPSKLAILATIMKLVPRRIWRKMPR" FT misc_feature complement(1238951..1239643) FT /note="HMMPfam hit to PF00106, short chain dehydrogenase" FT misc_feature complement(1239146..1239232) FT /note="ScanRegExp hit to PS00061, Short-chain FT dehydrogenases/reductases family signature." FT CDS complement(1239661..1240800) FT /transl_table=11 FT /locus_tag="DIP1238" FT /product="Putative dipeptidase" FT /note="Similar to Mycobacterium tuberculosis probable FT dipeptidase Rv2089c or MT2150 or MTCY49.29c FT SWALL:YK89_MYCTU (SWALL:Q10698) (375 aa) fasta scores: E(): FT 3.1e-56, 49.86% id in 377 aa, and to Halobacterium sp FT probable peptidase PepQ1 or Vng0723g SWALL:Q9HRF6 FT (EMBL:AE005016) (369 aa) fasta scores: E(): 2.2e-37, 38.62% FT id in 378 aa" FT /protein_id="CAE49767.1" FT /translation="MTNTFPSRVYTKRLQQASRGAINHGLRGVVIGPGPQLEYLTGLRV FT NTHERFSALIIPAGFSSLSDAVLVVPSVDRGDVVRSAITEMGVTIQYWDDGEDAHTLAM FT NALSPLRDADVIGVDDHLEATHLISLMGLAGQGVSFVLANTVMSELFINKDPDEISQLR FT SAGEAIDRVHAEVPHLITAGRTEAEVAQDLHRLIAQEHSAIDFIIVGSGPNGANPHHDF FT SDRILNTGDIVVVDIGGTFGAGYHSDCTRTFVVGGPQHLPSDAKNLYAVLEKAQEAAVA FT HVRPGVTAESVDNVAREIITQAGYGEYFIHRTGHGIGLSTHEEPFIMKGNKLVLQPGMV FT FSIEPGIYIPGKYGARIEDIVVVTESGCERLNNQPRTLQ" FT misc_feature complement(1239664..1240347) FT /note="HMMPfam hit to PF00557, metallopeptidase family M24" FT CDS complement(1240851..1243643) FT /transl_table=11 FT /locus_tag="DIP1239" FT /product="Putative helicase" FT /note="Similar to Mycobacterium tuberculosis probable FT helicase HelY or Rv2092c or MT2153 or MTCY49.30c FT SWALL:HELY_MYCTU (SWALL:Q10701) (906 aa) fasta scores: E(): FT 4.5e-69, 48.87% id in 933 aa, and to Synechocystis sp FT antiviral protein Ski2 or SLR0451 SWALL:P74686 FT (EMBL:D90917) (1006 aa) fasta scores: E(): 2.3e-27, 29.42% FT id in 1040 aa" FT /protein_id="CAE49768.1" FT /translation="MNATVEPESHLSYFAARQKFPLDEFQIRGCQAVESGRGVLVCAPT FT GAGKTIVGEFAVSLAISQQTKCFYTTPIKALSNQKFHDLVKAHGEDKVGLLTGDVSINR FT DADIVVMTAEVLRNMIYADSEALDRLSHVVMDEIHFLSDSSRGPVWEEAILGLDASVNV FT IGLSATVSNSEEFGRWLNTVRGDTEIIVSENRPVPLNQWMLVARRMHPLFEPGTTGEVN FT SRLVEHIERLEGTTTDGTEYGRAQLKAGGFRNRSRAMGSDNRASRRSPHRLSDKHRALS FT RPDVLHILQEQNMLPAITFIFSRAGCDAALHQCMRSSLVLTTQEESEEISDIITAGVAG FT IPEEDLRLLEYRRWRQALMRGFAAHHAGMLPAFRHVVEKLFTKGLVRAVFATETLALGI FT NMPARTVVLEKLVKFNGEGHADLTPGQYTQLTGRAGRRGIDVIGNAVVQWTPAMDPGQV FT AGLASTRTYPLVSTFAPGYNMSVNLLKTIGFEPAHRLLEKSFAQFQADGSVVDDIKAIE FT SLEESVDQLTKQLHAAFDSHDQGGAGDVDSFLEYIRIRRELTEEERKHKRLSIEQRDME FT TTRVLSKLQLGDVIAMPSKKHPLLAVVVNPANNKKDPRVWITMETGWSGRVGTDAFAMP FT PVAIGHMRLSRQTIAQPRKNSRFVVDQFRKANFQRPRRLKTSPRNRPNATISVLREQLR FT SHPAHHWRKREDLARVGEQLVREQRMLEAAQRKVNEATDTLGRTFDRIINLLAEYDYVE FT FHDGVPVITEEGENLCQIHNESDLLVAQCLKRGIWDDLDPAELSGVVSMCTFENRRETR FT GEPDAATEEMAKAMNNTVRIWEELSTDERRYRLPVTRYPEGGFALAMHQWAAGAPLGYC FT IAAAAESGAELTPGDFVRQCRQVVDLLEQVRSTAYNNDTRRAARKAIDAIRRGVVAIGN FT " FT misc_feature complement(1242330..1242590) FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(1242330..1242599) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT misc_feature complement(1243038..1243592) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(1243050..1243610) FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature complement(1243494..1243517) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS 1243744..1244214 FT /transl_table=11 FT /locus_tag="DIP1240" FT /product="Putative tRNA/rRNA methyltransferase" FT /note="Similar to Mycobacterium leprae putative tRNA/rRNA FT methyltransferase ML0419 SWALL:Q9CCU7 (EMBL:AL583918) (158 FT aa) fasta scores: E(): 7.7e-35, 58.71% id in 155 aa, and to FT Escherichia coli hypothetical tRNA/rRNA methyltransferase FT YibK or B3606 SWALL:YIBK_ECOLI (SWALL:P33899) (157 aa) FT fasta scores: E(): 3.3e-28, 50% id in 152 aa" FT /protein_id="CAE49769.1" FT /translation="MSKLHIVFDNPVIPNNTGNAIRTSAVTGASLHLIEPLGFNFEDKN FT LKRAGLDYHDLADVHIHSNFDACMNALPHSRVFAFSSHATTWYTDIEYKDGDVLLFGTE FT PTGLPTEHLEHPRITQQVRIPMLPARRSMNLSNCASIAIYEAWRQLGFEGAQ" FT misc_feature 1243750..1244175 FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase family" FT misc_feature 1243759..1244190 FT /note="BlastProDom hit to PD001243, PD001243" FT stem_loop 1244231..1244283 FT /note="Score 52: 20/22 (90%) matches, 0 gaps" FT CDS complement(1244300..1245394) FT /transl_table=11 FT /gene="tatC" FT /locus_tag="DIP1241" FT /product="Sec-independent twin-arginine translocase system FT protein" FT /note="Similar to, although longer in its C-terminal region FT than Mycobacterium tuberculosis Sec-independent protein FT translocase protein TatC homolog or Rv2093c or MT2154 or FT MTCY49.33c SWALL:TATC_MYCTU (SWALL:Q10702) (308 aa) fasta FT scores: E(): 1.6e-54, 56.55% id in 290 aa, and to FT Escherichia coli Sec-independent protein translocase FT protein TatC or MttB or B3839 or Z5360 or ECS4768 FT SWALL:TATC_ECOLI (SWALL:P27857) (258 aa) fasta scores: E(): FT 9.3e-14, 28.04% id in 271 aa" FT /protein_id="CAE49770.1" FT /translation="MSNVDVQSTTKATRVRRNRIHNPFSVRPKRPTDGSMSLVEHLQEL FT RRRVIISVLALIVGTIVGFMWYQHPVNLHWFTLRSLGDILRGPYCSLPPENRAVLTLDG FT ECRLIATSPFEMFMLRLKVGALAGSVFASPVWLQQLWAFITPGLMKNERRWTLSFVTAA FT VTLFVSGAVLAYFVIAIGLQFLLTMGGEFQVTALSGGQYFNFILTLLVMFGVSFEVPLI FT IAMLNLAGILSYESIKDKRRIIIVSVFIFAAFMTPGQDPYSMVALGASLCLLVELAIQF FT TRLNDKRRKNTRPDWMDVDDEHASVLTPSSDSLEGSSPITSSAPIAPTSPISASAPESP FT SAVAPSTLERPQRLDTQSNFDDVL" FT misc_feature complement(order(1244543..1244608,1244621..1244665, FT 1244702..1244767,1244858..1244923,1244960..1245025, FT 1245191..1245247)) FT /note="6 probable transmembrane helices predicted for FT DIP1241 by TMHMM2.0" FT misc_feature complement(1244585..1245256) FT /note="HMMPfam hit to PF00902, MttB family UPF0032" FT misc_feature complement(1244732..1244791) FT /note="ScanRegExp hit to PS01218, Uncharacterized protein FT family UPF0032 signature." FT CDS complement(1245467..1245733) FT /transl_table=11 FT /gene="tatA" FT /locus_tag="DIP1242" FT /product="Sec-independent twin-arginine translocase system FT protein" FT /note="Similar to Mycobacterium leprae Sec-independent FT protein translocase protein TatA/E homolog or ML1331 or FT MLCB2533.27 or U2126b or B2126_C1_182 SWALL:TATA_MYCLE FT (SWALL:P54079) (88 aa) fasta scores: E(): 3.3e-07, 50.63% FT id in 79 aa, and to Escherichia coli Sec-independent FT protein translocase protein TatA or MttA1 or B3836 or Z5358 FT or ECS4766 SWALL:TATA_ECOLI (SWALL:O65938) (89 aa) fasta FT scores: E(): 0.056, 34.17% id in 79 aa" FT /protein_id="CAE49771.1" FT /translation="MNLGPTEILLILVIVVLLFGAKKLPDAARSLGRSMRIFKSEVKEM FT SNDDQRYEEQQQQRQIAAQAQQQVVNPVEIPQPQPTDIQRPQQ" FT misc_feature complement(1245470..1245586) FT /note="ProfileScan hit to PS50322, Glutamine-rich region." FT misc_feature complement(1245569..1245727) FT /note="HMMPfam hit to PF02416, mttA/Hcf106 family" FT misc_feature complement(1245671..1245721) FT /note="1 probable transmembrane helix predicted for DIP1242 FT by TMHMM2.0" FT CDS complement(1245768..1246727) FT /transl_table=11 FT /locus_tag="DIP1243" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis ORF11 FT SWALL:P72265 (EMBL:Z82004) (326 aa) fasta scores: E(): FT 1.3e-24, 31.42% id in 315 aa, and to Mycobacterium FT tuberculosis hypothetical 33.8 kDa protein Rv2095c FT precursor or MT2156 or MTCY49.35c SWALL:YK95_MYCTU FT (SWALL:Q10704) (316 aa) fasta scores: E(): 3.4e-24, 31.57% FT id in 304 aa" FT /protein_id="CAE49772.1" FT /translation="MLPYFQAHPGRSMMEAAVDLGSTPSQIKEDLNRLFCCGPGTFPDE FT LVDLDAQLQSVTIFDSQGMDAPLRLTRTEAGALLLSLEYLEQFPELVHMETVKSAAKKL FT REIMGPESSAVFDSQRFEDTPASEPVIDVIRDSMAQRVQLQFDYYSRAKDTTTKRIVSA FT TRLFSADGSTYLVGWDHEAQSHRTFLTTQIRNVWLSTQPAQPHVSSLRFDDSDPFGLQT FT AEQHVEIEINESAQWLTTVFPLEDVQPAHNGWIQAIMPVVSYSWLIDTLTRNADRMRLR FT DVRSPLAISMRESAKLGLTAYASEHAEGNQFEGKESLE" FT CDS complement(1246792..1247769) FT /transl_table=11 FT /locus_tag="DIP1244" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis ORF10 FT SWALL:P72264 (EMBL:Z82004) (330 aa) fasta scores: E(): FT 6.6e-20, 31.42% id in 331 aa, and to Mycobacterium leprae FT hypothetical 35.4 kDa protein ML1329 or MLCB2533.25 or FT B2126_C3_266 SWALL:YK96_MYCLE (SWALL:P54076) (331 aa) fasta FT scores: E(): 2.8e-19, 30.42% id in 332 aa" FT /protein_id="CAE49773.1" FT /translation="MGKDVALERIVNLTFAFLRAETQGRHYISADWVIKHVDGYAKNSA FT GQIRSDAAAHQLFKRDRAALDRAGVPIETIATGAQTLYRLRTEDYSLPEVTFTPEEATV FT LALAGQMGLGDELATFSRSGWTKIAASGVQRELTSTPRYTPVNDVNSIAARDFDAILAA FT RAHRSAVTFDYYETSTSSPQQRIMDPWSIVSERDRVYLVGYDHDRQAPRCFRITKLSGI FT RRVALEADFVEPDANIDLQQLVKEQLRRGKLLVNAIIKVQPDKAQELTSRGERQPDGTL FT LLRDVDRDWLVRTLARYAPHARVLSPDDLITDVVSLLKQAAGVD" FT RBS complement(1247777..1247780) FT CDS complement(1247794..1249233) FT /transl_table=11 FT /locus_tag="DIP1245" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis ORF9 FT SWALL:P72270 (EMBL:Z82005) (447 aa) fasta scores: E(): FT 8.7e-96, 55.7% id in 456 aa, and to Mycobacterium FT tuberculosis hypothetical 51.4 kDa protein Rv2097c or FT MT2158 or MTCY49.37c SWALL:YK97_MYCTU (SWALL:Q10706) (452 FT aa) fasta scores: E(): 8.8e-96, 54.56% id in 460 aa" FT /protein_id="CAE49774.1" FT /translation="MGEYERTVFTRRITGVETEYGITCVGDNSRRRLGADEAARYMFRP FT VVEEWGSSNVFIPNGARLYLDVGSHPEYASAECDSLSQLIAYDRAGDKIVDQLAQRAET FT ALATEGIGGRVYLFKNNLDSLGNSYGCHENYLVSRDVVLKTLGRQLLPFLITRQLICGA FT GSIQDGQFQVSQRADHVWEGVSSATTRSRPIINTRDEPHADSHRFRRLHVIVGDSNMSE FT TTCALKIGSTQLVLEMIEAGALSHDLELSNEIAAIREISRDITGMAPVPLKAGTSMPAI FT EIQRRYAEKALCWLEQRGDTEGTPNAEMHKVVSLWLDTISAIESNDLQALSRDIDWAIK FT LSLLRRAQRRIGCSESDFTHPKLAQLDLAYHDIRAGRGVFPVLESKQLVNRWINDTDIE FT QATRIAPSTTRAALRGEFLTAAKKLQAPISADWLRLKVNRPEPQIIELTDPFENTDDRV FT DQLISYMRNHAASYSTDTAIS" FT misc_feature complement(1247839..1248825) FT /note="HMMPfam hit to PF03136," FT CDS complement(1249238..1249432) FT /transl_table=11 FT /locus_tag="DIP1246" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium smegmatis hypothetical 7.0 FT kDa protein PrcS SWALL:O30517 (EMBL:AF009645) (64 aa) fasta FT scores: E(): 3.2e-07, 60.71% id in 56 aa, and to FT Rhodococcus erythropolis similar to ORF7 SWALL:Q53082 FT (EMBL:U26422) (64 aa) fasta scores: E(): 1.6e-06, 55% id in FT 60 aa" FT /protein_id="CAE49775.1" FT /translation="MNQNGSQIHSDGNGHSDDTDTPGVSAGQVSVNTAGVDDLLDEIDG FT LLESNAEEFVRSYVQKGGQ" FT CDS complement(1249490..1251016) FT /transl_table=11 FT /locus_tag="DIP1247" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis similar to ORF6 FT SWALL:Q53081 (EMBL:U26422) (499 aa) fasta scores: E(): FT 2.2e-72, 48.04% id in 512 aa, and to Frankia spACN14A/ts-r. FT hypothetical 56.4 kDa protein SWALL:Q9RAW9 (EMBL:AF142435) FT (505 aa) fasta scores: E(): 3.8e-51, 47.36% id in 494 aa" FT /protein_id="CAE49776.1" FT /translation="MSRFVGTETEYGIATPSNTMLSPIVTSTHAVVAFSLGERCASQAR FT WDFSEESPLRDLRGFDLRRYRTVPVVDPHALGVANSVLINGGRFYVDHAHPEYSSPETS FT SAFQAMLYDAAGDVVMNRAVELVAENSQRKHSVLEHHDPCPPLKIYKNNVDGKGASYGS FT HENYLYNRETPFEEISSGLTPFFITRQVIIGAGRVGIGQYGEKSGFQISQRADYIEQEI FT SLETTLNRGIINTRDEPHADSEHFGRLHVIIGDANMSQTSNFLKIGMTTLVLDAIEAGV FT DFSDLAVANPVAEVSAISHDLTLTHKIVLRDGRTLTALELLDEYRKRVSPQSDDDLDVL FT KEWSEILVLLQKGPFYAADRLDWCAKWQLISSFIKRGVSIDDPKIQLIDLQYADIDPAK FT SLYHALVRKGRMRTLVSTEQINNAAWSPPKGSRAYLRGSLISRFPDSVVQASWDSITLQ FT TSRDQATKIKMPVVQSLSAEAIATIDTASSVKEVATILSQWLPVTTISLT" FT misc_feature complement(1249568..1250512) FT /note="HMMPfam hit to PF03136," FT CDS complement(1251013..1252542) FT /transl_table=11 FT /locus_tag="DIP1248" FT /product="Putative AAA protein family ATPase" FT /note="Similar to, although shorter in its N-terminal FT region than Streptomyces coelicolor AAA protein family FT ATPase Arc SWALL:Q9RJ58 (EMBL:AL132648) (588 aa) fasta FT scores: E(): 3e-76, 54.14% id in 519 aa, and to, although FT shorter in its N-terminal region than Mycobacterium leprae FT putative AAA-family ATPase ML1316 or MLCB2533.12 or A2126A FT or B2126_C1_167 SWALL:YL15_MYCLE (SWALL:P46509) (609 aa) FT fasta scores: E(): 2.1e-58, 54.99% id in 531 aa" FT /protein_id="CAE49777.1" FT /translation="MLTSDPSESTAHLQRTISNLSARNAKLAELLKASRDKLSILQDQL FT EDLAAPPSTYGTFLEFSGGRETAEVFTAGRHMRLRISPDVEKAELVPGVQVRLGEASQV FT VEVCDISTTGQLATLVELLADNRGLICDHTGEERVVKLAAALTEGVDKLPKAGDTLLVD FT PRAGYAFEVIPKTEVSTLALEEVPDVTYADIGGLNSQIELIHDAVELPFTQPDLYRAYD FT LKPPKGVLLYGPPGCGKTLIAKAVANSLAQRIGAGNRSYFINVKGPELLNKYVGETERR FT IRLIFERARELAEEGRPVIVFFDEMESIFRTRGSGVSSDMETTVVPQLLTELDGVESLS FT NVIIIGATNREELIDPAILRPGRLDVKIRVERPDKQAARDVFARHLKQNIPTAEPIDSL FT INNAVDHLYADNPYVELSLIDGSTEILHYRDFVSGAMIANIVDRAKKCAIKDHIAGRHS FT GVASEHLIAAINAENHESEDLPNTSNPDDWSRIIGRHGLRVAHARVLGGQR" FT misc_feature complement(1251193..1251861) FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA)" FT misc_feature complement(1251208..1251246) FT /note="FPrintScan hit to PR00819, CbxX/CfqX superfamily FT signature" FT misc_feature complement(1251421..1251870) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(1251463..1251519) FT /note="ScanRegExp hit to PS00674, AAA-protein family FT signature." FT misc_feature complement(1251700..1251744) FT /note="FPrintScan hit to PR00819, CbxX/CfqX superfamily FT signature" FT misc_feature complement(1251814..1251861) FT /note="FPrintScan hit to PR00819, CbxX/CfqX superfamily FT signature" FT misc_feature complement(1251823..1251846) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1252639..1253475) FT /transl_table=11 FT /locus_tag="DIP1249" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhodococcus erythropolis hypothetical FT 35.2 kDa protein SWALL:Q9ZG14 (EMBL:AF088800) (324 aa) FT fasta scores: E(): 7.9e-71, 65.45% id in 275 aa, and to FT Mycobacterium tuberculosis hypothetical 30.1 kDa protein FT Rv2118c or MTCY261.14c SWALL:O33253 (EMBL:Z97559) (280 aa) FT fasta scores: E(): 2.6e-62, 58.27% id in 278 aa" FT /protein_id="CAE49778.1" FT /translation="MANSGPFQPGDRVQLTDPKRRHATIVLETGGAYHTHKGMIHHDDI FT IGNAEGTVVKSEQGYEYLCFRHLMVDHVLSMPRGAAVIYPKDSAQILVEGDIFPGARVL FT EAGAGSGALSMALLRAVGHEGHVFSYEIREDHLEYAENNVDEFFGYRPETWSPRLGDLQ FT DVTVEDLGGPVDRIILDMLAPWECLETASRLLIPGGVLMTYVATVPQLMKVMEGIRELK FT CFTEPRAWESLVREWRVEGLATRPEHRMNAHTAFLIWTRRLADGTVPPRPQRRARK" FT misc_feature complement(1252858..1253190) FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT CDS complement(1253482..1254840) FT /transl_table=11 FT /locus_tag="DIP1250" FT /product="Putative M18-family aminopeptidase" FT /note="Similar to Streptomyces coelicolor probable FT M18-family aminopeptidase 2 ApeB or SCGD3.02 SWALL:Q9XA76 FT (EMBL:AL096822) (432 aa) fasta scores: E(): 2.9e-75, 46.31% FT id in 421 aa, and to Mycobacterium leprae probable FT M18-family aminopeptidase 2 ApeB or PepC or PepX or ML2213 FT or MLCB5.29 SWALL:Q50022 (EMBL:U15182) (443 aa) fasta FT scores: E(): 4.7e-53, 38.78% id in 428 aa" FT /protein_id="CAE49779.1" FT /translation="MIMDSSFSDHRGIPIADLDHSEHVRSQTEAMAWELVSFIANSPSS FT FHAAQQGAQLLQEAGFHQVDETADWDSTLGGHFMIRGGALMAWYVPTSADTSSGFRIIG FT AHNDSPGFKLKYHPDLMSAGWQQASVEVYGGPILASWFDRELVLAGRIGLIDGSTRTVT FT TAPVLRIPHLAIHLDRDANTSLSIDRQRHTQPIFAVGEPDLSIMDVIATAAGVNKEEII FT SHDLITADAQPGEIFGATSDFLAAGRLDNLSSVFPGLKAFVEAAEDNVLGRAPMKDILV FT FAAFDHEEVGSATTTGAAGPILEDVLTRTAAGLGADAEKTKQMITRSTCISVDAAHSIH FT PNYAHQHDPLNHPVMGGGPTLKVNANQRYASNTETEAMWVRACMKAGSSHQVFVGNNSV FT PCGSTIGPITATRLGIPTVDVGVPLLSMHSARELASTTDIYWLSRCLHAYLVG" FT misc_feature complement(1253491..1254729) FT /note="HMMPfam hit to PF02127, Aminopeptidase I zinc FT metalloprotease (M18)" FT misc_feature complement(1253545..1253592) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(1253809..1253859) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(1253932..1253988) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(1254382..1254444) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT misc_feature complement(1254493..1254543) FT /note="FPrintScan hit to PR00932, Aminopeptidase I zinc FT metalloprotease (M18) signature" FT CDS 1254942..1255808 FT /transl_table=11 FT /locus_tag="DIP1251" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 30.9 kDa protein Rv2119 or MTCY261.15 SWALL:O33254 FT (EMBL:Z97559) (278 aa) fasta scores: E(): 9e-48, 48.16% id FT in 272 aa, and to Streptomyces coelicolor hypothetical 31.9 FT kDa protein SCI41.36 SWALL:Q9RJ55 (EMBL:AL132648) (284 aa) FT fasta scores: E(): 2.8e-45, 47.34% id in 264 aa" FT /protein_id="CAE49780.1" FT /translation="MTTSTPSASPLALSPSRANDYQQCPLLYRFRAIDKLPEPKTVAQV FT KGTLVHAVLEEMHGWPRNERLFPAAVKRLKPHWSLMCSKDTELVSLVPEEDTYDFLVEC FT RSLLRGYFEMENPQGFDALACEMYVNATLPNGVPIRGFIDRVDKAPTGEIRVVDYKTGK FT KPIPRFSQQAQFQMRFYALVYWRIYGRIPDQLRLMYLKVADSMFLTPSREELEYFERDI FT QELWEKIVTDGETGQFRPKTSKLCGWCSFQNLCPAFDGTPPAYPGWPGIADAPPCSTVD FT ASKGLTG" FT CDS 1255902..1256171 FT /transl_table=11 FT /locus_tag="DIP1252" FT /product="Putative virulence-associated protein" FT /note="Low similarity to Caulobacter crescentus FT virulence-associated protein, putative CC2867 SWALL:Q9A4G7 FT (EMBL:AE005951) (104 aa) fasta scores: E(): 0.00032, 29.26% FT id in 82 aa, and to Bacteroides nodosus FT virulence-associated protein I VapI SWALL:VAPI_BACNO FT (SWALL:Q46560) (108 aa) fasta scores: E(): 0.0023, 27.58% FT id in 87 aa" FT /protein_id="CAE49781.1" FT /translation="MSSAHAPFNPVPRHPGKVLETEYLVPQNISHYDLAKQLHITETSL FT DHFIAGETDVDYVLAFGLAHVFRESPELWIRRQQDWDTFLEQEH" FT misc_feature 1255986..1256051 FT /note="Predicted helix-turn-helix motif with score 1259 FT (+3.47 SD) at aa 42-63, sequence ISHYDLAKQLHITETSLDHFIA" FT CDS complement(1256231..1257883) FT /transl_table=11 FT /gene="fhs" FT /locus_tag="DIP1253" FT /product="formyltetrahydrofolate synthetase" FT /note="Similar to Staphylococcus aureus (strain N315) FT formyltetrahydrofolate synthetase Fhs or SA1553 or SAV1732 FT SWALL:Q99TD2 (EMBL:AP003134) (555 aa) fasta scores: E(): FT 1.2e-125, 59.34% id in 551 aa, and to Moorella FT thermoacetica formate--tetrahydrofolate ligase Fhs FT SWALL:FTHS_MOOTH (SWALL:P21164) (559 aa) fasta scores: E(): FT 4.9e-116, 55.57% id in 556 aa" FT /protein_id="CAE49782.1" FT /translation="MPTDVEIAQAHTLEPITDIANRAGVPSDALIPYGFTKAKIDINRI FT ASENTGKLVLVTGISPTPAGEGKSTVLIGLSDAMRLRGHNSIVAIREPSLGPVMGIKGG FT AAGGGYSQIVPMEDINLHFTGDFHAITAANNTLAAMIDNHIHQGNTLGIDVRRITWQRC FT LDVNDRCLRKVVTGLGGKAHGVPTETGFTITAASEIMAILCLALDLTDLEARLARIVVG FT QTFSSEPVTVGQLNAQGALAALLRDAVNPNLVQTLGGTPALCHGGPFANIAHGCNSLIA FT TKTALSLGDVVLTEAGFGSDLGAEKFFDIKSRVGDLNVAATVVVATVRSLKYNAGVPKD FT ELTTENLEALASGVVNLERHVENIRAFGIEPIVALNKFASDTDAEINQLKAWAETMSVQ FT LIPVEVWAHGGQGALELADAVAVSMQNQTSHHLYDPELGIEASLLTIAQKIYGAADVEL FT SKQARQDLAYLQENGWDRLPVCISKTQYSFSDDPSQLGRPEGHTLHVRNLLPRIGAGFI FT VALTGDVMTMPGLPKKPAAENIGVENGEIKGLF" FT misc_feature complement(1256234..1257883) FT /note="HMMPfam hit to PF01268, Formate--tetrahydrofolate FT ligase" FT misc_feature complement(1257554..1257586) FT /note="ScanRegExp hit to PS00721, Formate--tetrahydrofolate FT ligase signature 1." FT CDS complement(1258020..1259594) FT /transl_table=11 FT /gene="aspA" FT /locus_tag="DIP1254" FT /product="aspartate ammonia-lyase" FT /EC_number="4.3.1.1" FT /note="Similar to Corynebacterium glutamicum aspartate FT ammonia-lyase AspA SWALL:ASPA_CORGL (SWALL:Q59200) (526 aa) FT fasta scores: E(): 1e-151, 75.66% id in 526 aa, and to FT Escherichia coli aspartate ammonia-lyase AspA or B4139 FT SWALL:ASPA_ECOLI (SWALL:P04422) (478 aa) fasta scores: E(): FT 5.2e-121, 67.16% id in 469 aa" FT /protein_id="CAE49783.1" FT /translation="MASQAKNTKGSKNAEVTNDVLDGKTEGTAEKVNDAPIASDVTTKH FT ATKKAAPGFRIEEDLLGEMEVPDEVYYGVHTLRAIDNYKISSTTINDVPEFIRGMVQVK FT KATALANRRLHTLPKDKCDAIVWACDQILDHGRCMDQFPIDVFQGGAGTSVNMNTNEVI FT ANLALEHLGKPKGSYDIINPNDDVNMSQSTNDAYPTGFRLGVYEAMQELITRIDNLQFA FT FHAKGDEFTDILKMGRTQLQDAVPMTLGEEFQAFAHNLAEEQSVLRMASDRLKEVNLGA FT TAIGTGLNTPAGYRYQVVAALSECTGLEIKSARDLIEATSDTGAYVLAHAAVKRTAMKL FT SKICNDLRLLSSGPRAGLNEINLPARAAGSSIMPAKVNPVIPEVVNQVCFKVFGNDLTV FT TMAAEAGQLQLNVMEPVIGQALFESIRILGNAAVTLQHKCVEGITANADVCRAYVDNSI FT GIVTYLNPFIGHHMGDVIGKEAAETGKSVRELVLEKGLMDEETLNQILSKENLMHPSFR FT GTLYLDN" FT misc_feature complement(1258068..1259411) FT /note="HMMPfam hit to PF00206, Lyase" FT misc_feature complement(1258440..1258490) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(1258461..1258490) FT /note="ScanRegExp hit to PS00163, Fumarate lyases FT signature." FT misc_feature complement(1258545..1258628) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(1258851..1258901) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT misc_feature complement(1258854..1258916) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature complement(1258971..1259039) FT /note="FPrintScan hit to PR00145, Delta crystallin FT signature" FT misc_feature complement(1258980..1259036) FT /note="FPrintScan hit to PR00149, Fumarate lyase FT superfamily signature" FT stem_loop complement(1259754..1259788) FT /note="Score 51: 17/17 (100%) matches, 0 gaps" FT CDS complement(1259869..1261176) FT /transl_table=11 FT /gene="dcuA" FT /gene_synonym="genA" FT /locus_tag="DIP1255" FT /product="anaerobic C4-dicarboxylate transporter" FT /note="Similar to Escherichia coli anaerobic FT C4-dicarboxylate transporter DcuA or GenA or B4138 or Z5743 FT or ECS5119 SWALL:DCUA_ECOLI (SWALL:P04539) (433 aa) fasta FT scores: E(): 3.1e-92, 57.33% id in 436 aa, and to Vibrio FT cholerae C4-dicarboxylate transporter, anaerobic VC2699 FT SWALL:Q9KNN2 (EMBL:AE004335) (451 aa) fasta scores: E(): FT 7e-95, 63.15% id in 437 aa" FT /protein_id="CAE49784.1" FT /translation="MVFVHILIVLAAIVLGARLGSIAIGFAGGIGVLLLGATGVPVTRE FT DIPFDVIGIIMAVIAAISAMQRAGGMDYLVHLAERALRKSPKHITYVAPVVTYLMTLFA FT GTGHTAFSTLPVIVEVSKESGVRPSRPLSVAVPASQMAITASPISAAVVFLASALEPLG FT VGYLSLLAIVIPATFLAIFPTAWLCNRLGKDLYDDPVYQQRLADGLVAAPGKKESYVPT FT SAAKLSVGIFLVAIVAVMVYATLISDQVGLIADPALPRNEAIMSMMLTAATITVMACKI FT PAGDILNTQVFRSGMSACVCVLGVAWLGTTLINHYIEGIKGFSGDILERSPWMLAVVLF FT AAAALLYSQAATAKALIPAALAIGVSPLTVIASFAAVSALFVLPTYPTLLAAVEMDDTG FT STRIGKAVFNHPFLIPGTVGIAISVALGFLFGGLIL" FT misc_feature complement(order(1259875..1259940,1260034..1260099, FT 1260121..1260177,1260238..1260303,1260325..1260390, FT 1260436..1260501,1260619..1260684,1260715..1260780, FT 1260844..1260909,1260970..1261035,1261072..1261164)) FT /note="11 probable transmembrane helices predicted for FT DIP1255 by TMHMM2.0" FT misc_feature complement(1261045..1261176) FT /note="Signal peptide predicted for DIP1255 by SignalP 2.0 FT HMM (Signal peptide probability 0.930) with cleavage site FT probability 0.306 between residues 44 and 45" FT CDS complement(1261537..1262382) FT /transl_table=11 FT /gene="hisG" FT /locus_tag="DIP1256" FT /product="ATP phosphoribosyltransferase" FT /EC_number="2.4.2.17" FT /note="Similar to Corynebacterium glutamicum ATP FT phosphoribosyltransferase HisG SWALL:HIS1_CORGL FT (SWALL:Q9Z472) (279 aa) fasta scores: E(): 2.7e-79, 75.44% FT id in 281 aa, and to Escherichia coli ATP FT phosphoribosyltransferase HisG or B2019 SWALL:HIS1_ECOLI FT (SWALL:P10366) (299 aa) fasta scores: E(): 9.4e-16, 32.3% FT id in 291 aa" FT /protein_id="CAE49785.1" FT /translation="MLKIAIPNKGSLSEAAVEILAEAGYAGRGESKTLNVYDKTNDVEF FT FFLRPKDIAIYVAGGQLDLGITGRDLATDSHANVEEVMSLGFGNSSFRYAAPADQKWTV FT EMLEGKRIATSYPNLVRDDLQARGINATVIRLDGAVEISIKLGVADAIADVVSTGRTLR FT KQGLATFGEVICQSEAVIVGQQGNVVDNEQKVFLRRIEGILHAQNYLMLDYNIDRVNLA FT ASEKITPGISGPTVSPLARENWVAVRAMVPRKEANHIMDQLSELGAQAILASEIRIARL FT " FT misc_feature complement(1261771..1262241) FT /note="BlastProDom hit to PD003516, PD003516" FT /note="HMMPfam hit to PF01634, ATP FT phosphoribosyltransferase" FT misc_feature complement(1261897..1261962) FT /note="ScanRegExp hit to PS01316, ATP FT phosphoribosyltransferase signature." FT CDS complement(1262464..1262727) FT /transl_table=11 FT /gene="hisE" FT /locus_tag="DIP1257" FT /product="phosphoribosyl-ATP pyrophosphatase" FT /EC_number="3.6.1.31" FT /note="Similar to Corynebacterium glutamicum FT phosphoribosyl-ATP pyrophosphatase HisE SWALL:HIS2_CORGL FT (SWALL:Q9Z471) (87 aa) fasta scores: E(): 3e-23, 73.56% id FT in 87 aa, to the C-terminal region of Bacillus subtilis FT histidine biosynthesis bifunctional protein [includes: FT phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP FT pyrophosphatase] HisI or HisIE SWALL:HIS2_BACSU FT (SWALL:O34912) (209 aa) fasta scores: E(): 0.023, 32.53% id FT in 83 aa, and to the C-terminal region of Escherichia coli FT histidine biosynthesis bifunctional protein [includes: FT phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP FT pyrophosphatase] HisI or HisIE or B2026 SWALL:HIS2_ECOLI FT (SWALL:P06989) (203 aa) fasta scores: E(): 0.08, 38.88% id FT in 72 aa. Note: Although in E. coli and B. subtillis HisE FT is part of a bifunctional protein (together with HisI), it FT seems that in C. diphtheriae they are separate proteins" FT /protein_id="CAE49786.1" FT /translation="MKNFDSLYHELAERAEKRPEGSGTVAALNSSLHTLGKKVIEEAGE FT VWLAAEYQSDAELAEEISQLMYWAQVIMIKRGLTPEDIYKYL" FT misc_feature complement(1262467..1262715) FT /note="BlastProDom hit to PD002611, PD002611" FT misc_feature complement(1262467..1262718) FT /note="HMMPfam hit to PF01503, Phosphoribosyl-ATP FT pyrophosphohydrolase" FT CDS complement(1262746..1263441) FT /transl_table=11 FT /locus_tag="DIP1258" FT /product="Putative hydrolase" FT /note="Similar to Streptomyces coelicolor putative FT hydrolase SCI46.01c SWALL:Q9EWH4 (EMBL:AL499607) (233 aa) FT fasta scores: E(): 4.7e-15, 32.8% id in 189 aa, and to FT Rhodobacter capsulatus CbbY protein SWALL:CBBY_RHOCA FT (SWALL:O33513) (227 aa) fasta scores: E(): 1.6e-11, 33.65% FT id in 205 aa" FT /protein_id="CAE49787.1" FT /translation="MLRGILWDMDGTLVDSEGIWAQATFAMSTEMGRRLTAAQQRETVG FT SSFNFTVSLCASNAGIELDSEAKNYWQSFMSHYVTEKFDSSLLPNPGIKEVLDSCRNAE FT IPMAIATNTIRSIANHSIGAVGIEYFKATVCGDEVANPKPAPDVYLKGAQALGVPPEGC FT IVFEDSKSGMLGGLAAGCIVISVVDHLNNQPLPEGVVPLSRLHGSADFRGVSAEEIMQW FT YATLSPNAQ" FT misc_feature complement(1262875..1263417) FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase" FT CDS complement(1263485..1267090) FT /transl_table=11 FT /gene="metH" FT /locus_tag="DIP1259" FT /product="5-methyltetrahydrofolate--homocysteine FT methyltransferase" FT /EC_number="2.1.1.13" FT /note="Similar to Mycobacterium tuberculosis FT 5-methyltetrahydrofolate--homocysteine methyltransferase FT MetH or Rv2124c or MTCY261.20c SWALL:METH_MYCTU FT (SWALL:O33259) (1192 aa) fasta scores: E(): 0, 70.85% id in FT 1194 aa, and to Escherichia coli FT 5-methyltetrahydrofolate--homocysteine methyltransferase FT MetH or B4019 SWALL:METH_ECOLI (SWALL:P13009) (1226 aa) FT fasta scores: E(): 2.8e-92, 32.4% id in 1225 aa" FT /protein_id="CAE49788.1" FT /translation="MMNTATPQFKTAFLDAMKNRVLIGDGAMGTQLQGFDLDVDSDFLG FT LEGCNEILNHTRPDVVSAIHRAYFEAGADLVETNTFGCNLPNLADYDIADRCKELAFKG FT VKIAREVADELGPSADGTPRFVLGSMGPGTKLPSLGHAPYEALKNHYTEASLGMIEGGA FT DAILVETAQDLLQVKAAVHGCQTAFETSGIQLPIVCHVTVETTGTMLLGSEIGAALTAI FT EPLNVDMIGLNCATGPDEMSEHLRYLSRNAHIPVSVMPNAGLPVLGKNGAEYPLTEQEL FT ASALRGFVEEYGLSMVGGCCGTTPTHIREVRKAVLGDSEHQPALQAERNPDVGDAVSSL FT YTSVNLTQDTGITMIGERTNANGSKAFREAMLVGDLEKCVDIAKQQTRDGAHMLDLCVD FT YVGRDGTADMAQLASLLATSSTLPIMIDSTEPDVIQVGLEHLGGRCAVNSVNFEDGDGP FT DSRYQRIMRLVKRHGAAVVALTIDEEGQARTAEKKIEIAERLIADITSTWGLDESDIIV FT DTLTFPISTGQEETRRDGIETIEAIRELKKRHPKIHTTLGLSNISFGLNPAARQVLNSV FT FLNECIEAGLDSAIAHSSKIVPMNRIDEEQRRVALDLVYDRRSEGYDPLQTFMRLFEGV FT SAASASDARAEALAAMPLFKRIAQRIIDGEKAGFEDDLDAGMKEKEPLQIINEDLLEGM FT KTVGDLFGSGQMQLPFVLQSAETMKHAVAYLEQFIEADEDAGDGNGTIVIATVKGDVHD FT IGKNLVDIILSNNGFNVVNIGIKQPIANILEAAEKHKADAIGMSGLLVKSTVIMKENLQ FT EMNQAQKSDYPVILGGAALTRAYVEDDLTEVYEGNVHYAKDAFESLRLMQEFMAEARGE FT RLDPQSPEALAAAKKKAERKARRERSKQIVAQRKAKEIPIEVPERSEVAADVPIATPPF FT WGTRIVKGINLSEYLPLLDERALFVGRWGLKATRGGEGPSYEELVETEGRPRLRYWIDR FT LKAEKILDHAAVVYGYFPAVSEGDTVILLESPDPTSAEVARFNFPRQQRGKFLCVADFI FT RSREHAIKTKTVDVFPLQLVTMGQPIADFANVLFADNNYRDYLEVHGIGVQLTEALAEY FT WHARIRHELSLSDGSHAGDEDSADLQEFFNLKYRGARYSFGYGSCPNLEDRETLVDLLD FT SRRIGVDISEEFQLHPEQSTDAFVLYHPEAKYFNV" FT misc_feature complement(1263488..1264369) FT /note="HMMPfam hit to PF02965, Vitamin B12 dependent FT methionine synthase, activation domain" FT misc_feature complement(1264514..1264873) FT /note="HMMPfam hit to PF02310, B12 binding domain" FT misc_feature complement(1264886..1265158) FT /note="HMMPfam hit to PF02607, B12 binding domain" FT misc_feature complement(1266140..1267030) FT /note="HMMPfam hit to PF02574, Homocysteine FT S-methyltransferase" FT CDS complement(1267163..1267558) FT /transl_table=11 FT /locus_tag="DIP1260" FT /product="Conserved hypothetical protein" FT /note="Similar to the plasmid borne Corynebacterium FT striatum YtpA SWALL:Q9FB56 (EMBL:AF024666) (132 aa) fasta FT scores: E(): 7.6e-12, 37.19% id in 121 aa" FT /protein_id="CAE49789.1" FT /translation="MTDMSDSFSFIDDFLRDLEEFGTGSYLRADEKEFWDPPFDVSALP FT ELKKVLVAFAQSMVDIANSREQANSVVLDVIAKVGHFYSELAAFNAAYEYAVIEPEEES FT QLISMVEGMCKNLGLSDEEISDLPEFE" FT CDS complement(1267559..1268803) FT /transl_table=11 FT /gene="cysS2" FT /locus_tag="DIP1261" FT /product="cysteinyl-tRNA synthetase" FT /note="Similar to the plasmid borne Corynebacterium FT striatum CysS SWALL:Q9FB57 (EMBL:AF024666) (404 aa) fasta FT scores: E(): 5.5e-103, 63.39% id in 418 aa, and to FT Escherichia coli cysteinyl-tRNA synthetase CysS or B0526 FT SWALL:SYC_ECOLI (SWALL:P21888) (461 aa) fasta scores: E(): FT 1.2e-40, 33.08% id in 405 aa" FT /protein_id="CAE49790.1" FT /translation="MQSWPMPTIPSVPGKPAVLSLFDTSDQLIKPVEVDTPEVGVYVCG FT ITPYDSTHLGHAATYLTFDLINRQLIDAGHRVHFVQNITDVDEPLFERALRDGVDWREL FT GSSQIDLFRSDMENLSVIPPRHYVGAMESIPEVIAMVETMLANGTAYIVESDSYRDIYA FT SITATTQFGYESHYSRELMEQFFAERGGDPERVGKKDSLDALIWRAHRLGEPSWDAPFG FT AGRPGWHVECSAIATHHLGSHFAIQGGGSDLIFPHHEFSAAHAEATFGESRMAGHYVHT FT GMIGLDGTKMSKSLGNLVFVSRLTSEGYHPSDIRLGVFAGHYRDDRDWSTDLLTAAQER FT RQAWITAADNARDVQQVQQTIQKIRHLLANDLNTPAVLAEVDNWANLIPLNDSARTEAG FT RLMASGLDALLGVKI" FT misc_feature complement(1267664..1268716) FT /note="HMMPfam hit to PF01406, tRNA synthetases class I FT (C)" FT misc_feature complement(1268006..1268071) FT /note="FPrintScan hit to PR00983, Cysteinyl-tRNA synthetase FT signature" FT misc_feature complement(1268108..1268164) FT /note="FPrintScan hit to PR00983, Cysteinyl-tRNA synthetase FT signature" FT misc_feature complement(1268546..1268575) FT /note="FPrintScan hit to PR00983, Cysteinyl-tRNA synthetase FT signature" FT misc_feature complement(1268648..1268683) FT /note="FPrintScan hit to PR00983, Cysteinyl-tRNA synthetase FT signature" FT CDS complement(1268849..1269697) FT /transl_table=11 FT /gene="bacA" FT /locus_tag="DIP1262" FT /product="bacitracin resistance protein" FT /note="Similar to the plasmid borne in Corynebacterium FT striatum BacA SWALL:Q9FB58 (EMBL:AF024666) (281 aa) fasta FT scores: E(): 6.4e-82, 76.83% id in 272 aa, and to FT Escherichia coli bacitracin resistance protein BacA or FT B3057 or Z4410 or ECS3940 SWALL:BACA_ECOLI (SWALL:P31054) FT (273 aa) fasta scores: E(): 1.7e-22, 36.29% id in 270 aa" FT /protein_id="CAE49791.1" FT /translation="MTQDPSSQISWSQTIVLSIVQGLTEFLPISSSGHLRIVSELFWGK FT DAGASFTAVVQLGTEAAVLVYFAKDIAKILTGWFRGLFDKKQRGFDYRMGWMVIVGTLP FT VSIVGLLAKDIIRDNLRNMWITASVLIAFSFVFIAAEKWGSKRRSFDQLTMRDAVIMGC FT AQCLALIPGVSRSGGTVSAGLFVGLDREVATRFSFLLAIPAVLASGLFSLPDAFAPDAG FT QAASGMQLAVGTGIAFALGYASIAWLLKFVGSHSFSWFAAYRIPVGLLVMALLATGMLT FT A" FT misc_feature complement(order(1268861..1268926,1268948..1269013, FT 1269044..1269109,1269281..1269331,1269362..1269412)) FT /note="5 probable transmembrane helices predicted for FT DIP1262 by TMHMM2.0" FT misc_feature complement(1268912..1269262) FT /note="HMMPfam hit to PF02673, Bacitracin resistance FT protein BacA" FT CDS 1269829..1270878 FT /transl_table=11 FT /locus_tag="DIP1263" FT /product="Putative lipoprotein" FT /note="Similar to Corynebacterium striatum LppL FT SWALL:Q9EVJ8 (EMBL:AF024666) (350 aa) fasta scores: E(): FT 4.3e-35, 34.21% id in 342 aa" FT /protein_id="CAE49792.1" FT /translation="MLVTSLVVKPALSTTLKMCTFSTLSAFVLTACSGNAETTNVAEIQ FT HDMGSATAAASPKATAPEGTVLKRSAIDALQTVGNSIGIKIGSHLELGSAADFEKGNTT FT KVSIDAECFDMTSSSKAFIVACSDGVHSVDPVSGKNSVIAQPTETAHYAVQVSTGEVLV FT AHRDSNKVEVFNDGEKLSEVATEYGSDQLISVPIEGQADAVVRINNKYTLIQDVNWKES FT KPGAILRVGKGVGRISAAKQGVVLASDAKKNQFAVYGAKDVIRLHQTSPTGPSPWGITW FT DNKHDLAWVATTGDNKVTGYDISSGTGSEKSSYNTIENVHNIAVLDDGTLVLASASGAG FT LQLVKSQTD" FT misc_feature 1269829..1269987 FT /note="Signal peptide predicted for DIP1263 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.332 between residues 53 and 54" FT misc_feature 1269892..1269924 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 1270943..1272034 FT /transl_table=11 FT /gene="pyrD" FT /locus_tag="DIP1264" FT /product="dihydroorotate dehydrogenase" FT /EC_number="1.3.3.1" FT /note="Similar to Corynebacterium striatum PyrD FT SWALL:Q9FB59 (EMBL:AF024666) (359 aa) fasta scores: E(): FT 6.8e-88, 69.01% id in 355 aa, and to Escherichia coli FT dihydroorotate dehydrogenase PyrD or B0945 or Z1294 or FT ECS1029 SWALL:PYRD_ECOLI (SWALL:P05021) (336 aa) fasta FT scores: E(): 5.2e-34, 41.34% id in 341 aa" FT /protein_id="CAE49793.1" FT /translation="MRTKAYALALKGMFTMSPERIHHIITRGMQLVQAISPLRRAVGSI FT LPVNDPILRQEVFGVTFPQPLGLAAGFDKNGEAPDVWAAFGFGYAELGTVTASPQPGNP FT TPRLFRLPADKAILNRMGFNNLGAAEVAKNLKRRKSDAVIGINIGKTKVVASKDAVNDY FT RRSALLLGNLADYLVINVSSPNTPGLRDLQAVESLRPIIAAVQESTSVPVLVKIAPDLS FT DDDIDAVADLAVEMGIAGIVATNTTISRNGLRTPHQDVADMGAGGISGAPVAQRSLEVL FT ERLYAHVGTEMVLIGVGGISTPQQAWERIAAGATLLQGYTGMIYGGPDWIRDIHLGIAA FT QLRAHDLSSIDQAVGSKLPWTLQ" FT misc_feature 1271096..1271968 FT /note="HMMPfam hit to PF01180, Dihydroorotate FT dehydrogenase" FT misc_feature 1271204..1271263 FT /note="ScanRegExp hit to PS00911, Dihydroorotate FT dehydrogenase signature 1." FT misc_feature 1271822..1271884 FT /note="ScanRegExp hit to PS00912, Dihydroorotate FT dehydrogenase signature 2." FT CDS complement(1272452..1272991) FT /transl_table=11 FT /locus_tag="DIP1265" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium striatum YbhB FT SWALL:Q9FB60 (EMBL:AF024666) (177 aa) fasta scores: E(): FT 5.1e-42, 60.67% id in 178 aa, and to Vibrio cholerae FT hypothetical protein VC1075 SWALL:Q9KT30 (EMBL:AE004189) FT (180 aa) fasta scores: E(): 1.2e-19, 41.1% id in 163 aa" FT /protein_id="CAE49794.1" FT /translation="MTYSNNHDRFPGADPYAPLNELPTFSLHSEDFSDGEKFNSIHLGG FT NDVSPHLEWNTLPEGTKSIAITCFDPDAPTASGFWHWAVFNIPVSQVSIAQGAANDGSL FT DQLGAISLRGDSGKRGYYGPNPPAGHGPHRYLFAVHAVDVESLDVDPDSSPAVLGFNLY FT FHSLGRAIRWGWYENS" FT tRNA 1273184..1273269 FT /gene="tRNA-Leu" FT /product="transfer RNA-Leu" FT /anticodon=(pos:1273217..1273219,aa:Leu) FT /note="tRNA Leu anticodon GAG, Cove score 53.26" FT repeat_region 1273330..1273359 FT /note="Possible inverted repeat" FT CDS 1273380..1274759 FT /transl_table=11 FT /locus_tag="DIP1266" FT /product="Putative transposase" FT /note="Similar to, although shorter in its N-terminal FT region than Escherichia coli possible transposase of IS1353 FT YahA SWALL:Q9WTH9 (EMBL:AP000342) (514 aa) fasta scores: FT E(): 2.5e-62, 41.59% id in 464 aa, and similar to, although FT longer in its N-terminal region than Escherichia coli FT putative transposase InsK for insertion sequence element FT IS150 or B3558 SWALL:INSK_ECOLI (SWALL:P19769) (283 aa) FT fasta scores: E(): 2.6e-35, 38.62% id in 277 aa" FT /protein_id="CAE49795.1" FT /translation="MNRSYTNTQKRTALRVYKRTQSVTKTVRELGYPGRWTLYKWLREP FT KTPPQPRKQAKTLTHYPYEVKLRAVELFHNGWRPADIAQECCLHTHASVYAWAQRYREE FT GQWGLMSKKERAGHGRIPTKAALEKSLPDNPTQLKQQMATLLVEKAVLEKELEIIKKDV FT SVIPGQLSNKHKTDVVDALRSTFPLAMLLAASGLAASSFYYHLKKRRMPDKHAAIRSMV FT HRISSDSHNTYGYRRIWWQLRHLGITISEKVVRRLMREEAITVRFPKRKVKYSSYQGEI FT SPAPPNLVNRCFHATAANTLWLTDISVFAANEGRVYLSVIIDCFDGKVVAAKTSVNPTM FT ELAESTLQAAIDAEGLPPDGSLVIHSDRGVHYRGRSWHSLTAKYGIVRSMSKKGCSPDN FT AACEGFFGRMKNEMYYGKRWQTIQELDDAIAAYIEFYNNHRIKVSLNGMSIARYRMAAV FT A" FT misc_feature 1273923..1273991 FT /note="1 probable transmembrane helix predicted for DIP1266 FT by TMHMM2.0" FT misc_feature 1274259..1274741 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT repeat_region 1274781..1274811 FT /note="Possible inverted repeat" FT CDS join(1274911..1275009,1275041..1275220,1275220..1275303, FT 1275275..1275790,1275789..1275806,1275805..1276077) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1267" FT /product="Putative oxidoreductase (pseudogene)" FT /note="Pseudogene. Similar to Streptomyces coelicolor FT putative oxidoreductase SCM11.12c SWALL:Q9RIU9 FT (EMBL:AL133278) (500 aa) fasta scores: E(): 8.9e-41, 52.1% FT id in 428 aa. Presents multiple frameshifts at residues 33, FT 93, 121, 293 and 299" FT CDS complement(1276058..1276807) FT /transl_table=11 FT /locus_tag="DIP1270" FT /product="Putative sulfurtransferase" FT /note="Similar to, although sorter in its N-terminal region FT than Vibrio cholerae thiosulfate sulfurtransferase SseA, FT putative VCA0620 SWALL:Q9KLX1 (EMBL:AE004392) (276 aa) FT fasta scores: E(): 6.9e-30, 38.72% id in 235 aa, and than FT Escherichia coli O157:H7 3-mercaptopyruvate FT sulfurtransferase SseA or Z3788 or ECS3387 SWALL:AAG57635 FT (EMBL:AE005482) (334 aa) fasta scores: E(): 2e-27, 38.65% FT id in 238 aa. Note: In the database matches for this CDS, FT the non-catalitic domain lies in the N-terminal region of FT the protein, hence this CDS being shorter in that region FT should not suppose a change in the possible catalytic FT activity, mostly if we consider that the possibly FT active-site residue 204 (cysteine) lies within the almost FT conserved region (CGCGVTA in E. coli and CGSRVTA in C. FT diphtheriae) possibly responsible for substrate FT specificity" FT /protein_id="CAE49797.1" FT /translation="MGISELKIPTAQRFDLDAEMSDSSSDIPHTLPTRKEFEKQLRTLG FT IDNYSLVVVYGKRGMDSTPRAWWMLKSAGVQNVSLANGELAAWIAAGNRTEFWEDKAAS FT QNKRNITVSSSFGSNSVNMQWLRARGSQLEIPIVDARSIERYHGEVEEPHKGLNRGHIP FT GAINIPFTTLQANGQLVSLDQLRSIFDQHLGCANRPFIAYCGSRVTACVVLFAASLIGQ FT HGLLYDGSWSKWGRQDYDNPVATKDEV" FT misc_feature complement(1276085..1276408) FT /note="ProfileScan hit to PS50206, Rhodanese/cdc25 fold." FT misc_feature complement(1276088..1276447) FT /note="HMMSmart hit to SM00450, Rhodanese Homology Domain" FT misc_feature complement(1276097..1276444) FT /note="HMMPfam hit to PF00581, Rhodanese-like domain" FT misc_feature complement(1276526..1276807) FT /note="HMMSmart hit to SM00450, Rhodanese Homology Domain" FT CDS complement(1276921..1277925) FT /transl_table=11 FT /locus_tag="DIP1271" FT /product="Putative kinase" FT /note="Similar to Mycobacterium leprae putative kinase FT ML1798 SWALL:Q9CBM8 (EMBL:AL583923) (327 aa) fasta scores: FT E(): 9e-63, 57.86% id in 318 aa, and to Escherichia coli FT LAO/AO transport system kinase ArgK or B2918 FT SWALL:ARGK_ECOLI (SWALL:P27254) (331 aa) fasta scores: E(): FT 1.1e-47, 49.82% id in 289 aa" FT /protein_id="CAE49798.1" FT /translation="MKKARRRIDVDELFEGVRRGDRTLISRAITLLESTAPAHRVLAQE FT LLVKLLPFSGKALRVGITGVPGVGKSTFIEALGMKLIGDGHKLAVLAIDPSSTKTRGSI FT LGDKTRMAKLAREDNAFIRPSPSAGTLGGVAKATRESMVVFEAAGYDVILVETVGVGQS FT EVAVSQMVDCFTFLALAGAGDQLQGIKKGILEMADLVAINKADGPNLKNAKRAARELAA FT AMRMVRQENDLWHPPTITMSAVEHEGVDEFWEHVQNHNKAMLESGVFEHNRREQQVQWM FT WSMVHETLLQRLNTDPNVVEVKKLVEDQLRHAHITPTLAAERILKAFDHVTAD" FT misc_feature complement(1277713..1277736) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1278111..1280318) FT /transl_table=11 FT /gene="sbm" FT /locus_tag="DIP1272" FT /product="Putative methylmalonyl-CoA mutase large subunit" FT /note="Similar to Escherichia coli Sbm protein or B2917 FT SWALL:SBM_ECOLI (SWALL:P27253) (714 aa) fasta scores: E(): FT 1.6e-148, 60.2% id in 696 aa, and to Mycobacterium FT tuberculosis probable methylmalonyl-CoA mutase large FT subunit MutB or Rv1493 or MT1540 or MTCY277.15 FT SWALL:MUTB_MYCTU (SWALL:P71774) (750 aa) fasta scores: E(): FT 4.8e-198, 76.55% id in 708 aa" FT /protein_id="CAE49799.1" FT /translation="MTTIPNFAEYPASPEDQNVADSSALEQQVWTTPEGIDVKRVYKRN FT DRNDSVPAQQLDSYPGMAPFMRGPYPTMYTNQPWTIRQYAGFSTAAESNAFYRRNLAAG FT QKGLSVAFDLATHRGYDSDNERVVGDVGMAGVAIDSILDMRQLFEGIDLGKVSVSMTMN FT GAVLPVLALYIVVAEEQGVAPEQLAGTIQNDILKEFMVRNTYIYPPKPSMRIISNIFEY FT TSLKMPRFNSISISGYHIQEAGATADLELAYTLADGIEYIRAGKGVGLDVDKFAPRLSF FT FWGISMNTFMEIAKLRAGRLLWSELVAKFDPKNPKSQSLRTHSQTSGWSLTAQDVYNNV FT ARTAIEAMGATQGHTQSLHTNALDEALALPTDFSARIARNTQLLLQQESGTTAPVDPWA FT GSYYIEWLTEQLAERARAHIEEVENAGGMAQATIEGIPKLRIEESAARTQARIDSGRQA FT LIGVNKYVVEEDEQIEVLKVDNTKVRAEQLAKLEQLRAERDQAEVDRCLKALTEAARIE FT EKEPGNLDQNLLKLAVDCARAKATVGEISDALEEVFGRHEAEIRTLSGVYKDEVGKEGT FT VGNVSKAIAMADAFETEEGRRPRIFLAKMGQDGHDRGQKVVASAYADLGMDVDVGPLFQ FT TPAEAARAAVDADVHVVGVSSLAAGHLTLVPALKEELAKLGREDIMVVVGGVIPPGDFQ FT ELYDDGAVAIYPPGTVIADAAIDMLEKLAANLGIDLKVDEA" FT misc_feature complement(1278168..1278527) FT /note="HMMPfam hit to PF02310, B12 binding domain" FT misc_feature complement(1278651..1280231) FT /note="HMMPfam hit to PF01642, Methylmalonyl-CoA mutase" FT CDS complement(1280321..1282132) FT /transl_table=11 FT /locus_tag="DIP1273" FT /product="Putative methylmalonyl-CoA mutase small subunit" FT /note="Similar to Mycobacterium tuberculosis probable FT methylmalonyl-CoA mutase small subunit MutA or Rv1492 or FT MT1539 or MTCY277.14 SWALL:MUTA_MYCTU (SWALL:P71773) (615 FT aa) fasta scores: E(): 1.5e-69, 43.15% id in 621 aa, and to FT Porphyromonas gingivalis methylmalonyl-CoA mutase small FT subunit MutA or McmA SWALL:MUTA_PORGI (SWALL:Q59676) (617 FT aa) fasta scores: E(): 4.9e-31, 30.73% id in 628 aa" FT /protein_id="CAE49800.1" FT /translation="MTDTRIAQTEELEAQRQEWYKAVAKVFARVQKKDVADIPLDIWQR FT LIRTTYDDIKVNPLYNRADELEETQIPGAFPYTRGFAGAGQEEGVGWGVTESFGSSSSN FT KDVIHALDNGTTDIVVYGEANIEELLKEVLFQYAPVRLNSGVATEEMANRLFSMVDAQG FT TVPRSIELGASPLSSMIDGSASVDLDTAINLAVRASERENTRAILVDAVSFSNQGATDA FT QQIGLALAAGAEYLRGLVAAGLSTEQALQQLSFRYAITDDQFAQISKLRAGRALWARVA FT EILGAKELGSAPQHALTAPVMFTQRDPWVNMLRSTVAAFAAGVGGAKDVEVLCFDWAIA FT GGIPNVSRSFAHRIARNTNLLLLEESHLGHVIDPAGGSYYVESLTSSIIEKAWKVFTDI FT EAAGGFLVAVENGSVKEMLDDAHERVRRDIAHRIKKVTAINEFPNLAEAPLPAELRVEP FT TCVRRWAAEFESFRNRSDVFMEVNGKRPQAVLIPLGPLAKHNIRTGFITNLLGTGGIEA FT LNPGQVVPGTPEFAEAAASAKIAVICGTDAEYDATGAEALAELRKLGVETILLAGSPGH FT DFEPDDYLNMKIDAATKLDGLLKKLGA" FT misc_feature complement(1280579..1281520) FT /note="HMMPfam hit to PF01642, Methylmalonyl-CoA mutase" FT CDS 1282382..1283083 FT /transl_table=11 FT /locus_tag="DIP1274" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 26.6 kDa protein Rv1491c or MT1538 or MTCY277.13c FT SWALL:YE91_MYCTU (SWALL:P71772) (252 aa) fasta scores: E(): FT 2.5e-24, 36.09% id in 205 aa, and to Streptomyces FT coelicolor putative integral membrane protein 2SCG61.05c FT SWALL:Q9K410 (EMBL:AL359949) (258 aa) fasta scores: E(): FT 2.3e-10, 28.09% id in 210 aa" FT /protein_id="CAE49801.1" FT /translation="MSAIFSYFLELFRDGFNTISEWSTVKKLGFTLLCCVFLAATVIID FT VPPLTVLRTWADNTGAWFVVVFTALYISITQFPIPRTLLTLSSGILFGPLAGIVIALLS FT TTASAMLSLLIVRRILGDWTRSRLTSANAVRVNHHIEQRGWFAVASLRMIAAVPFSLLN FT YVAGMTNISLISFGLATCIGSTPGTIVTVFIGNGLAQSYDATLFIPTICLAILGLCGLI FT IDSRLLVKSST" FT misc_feature order(1282466..1282534,1282553..1282621,1282664..1282732, FT 1282895..1282963,1282991..1283050) FT /note="5 probable transmembrane helices predicted for FT DIP1274 by TMHMM2.0" FT misc_feature 1282544..1282621 FT /note="ScanRegExp hit to PS01159, WW/rsp5/WWP domain FT signature." FT CDS 1283144..1283710 FT /transl_table=11 FT /locus_tag="DIP1275" FT /product="Putative DNA-binding protein" FT /note="No significant database matches" FT /protein_id="CAE49802.1" FT /translation="MYAIQARYRGRELKRAEYVSKAAAALSTLEGVEQFTLVGVEDIAS FT IIDTADATCDTALALLAAGDWAVAIAVMDTTTATSEDALAFVHKVLGPRARAGTVKVGV FT KKDKKWAAPIQAAFVMLAYILSKRTAEGREATSLMRSGLNQIEAAEELGISKQAISQRL FT QAAGWQAELAGYQLAIDLLQRANID" FT misc_feature 1283528..1283647 FT /note="ProfileScan hit to PS50116, Helix-Turn-Helix FT fis-type." FT misc_feature 1283570..1283635 FT /note="Predicted helix-turn-helix motif with score 2120 FT (+6.41 SD) at aa 143-164, sequence LNQIEAAEELGISKQAISQRLQ" FT CDS complement(1283795..1284922) FT /transl_table=11 FT /locus_tag="DIP1276" FT /product="Putative secreted protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 41.2 kDa protein Rv1488 or MT1533.2 or MTCY277.09 FT SWALL:YE88_MYCTU (SWALL:P71768) (381 aa) fasta scores: E(): FT 1.4e-79, 62.53% id in 363 aa, and to Pyrococcus abyssi FT stomatin-like protein PAB1324 SWALL:Q9UYE4 (EMBL:AJ248288) FT (299 aa) fasta scores: E(): 2.7e-35, 42.65% id in 279 aa" FT /protein_id="CAE49803.1" FT /translation="MIVLAVIMVLFAIVIAKSIVIIPQGEAAVVERLGRYTKTVAGGIS FT LLVPFIDRVRAKVDTRERVVSFPPQAVITQDNLTVAIDTVVTFQINDAAKAIYGVDNYI FT VGVEQISVATLRDVVGGMTLEETLTSREVINRRLRGELDAATTKWGLRISRVELKAIDP FT PPSIQQSMEMQMKADREKRAMILTAEGRRESDIRTAEGEKQAKILAAEGEKHAAILAAE FT AAKEARILEAEGQRAARYLEAQGEARAIQKVNAAIKASRLTPEVLAYQYLEKLPQLAEG FT KASTMWMIPSQFGDSLEEFAKALANKGDDGVFRYEPSEVDEHSSRLVGEDNHEDWFKTE FT SNPEIAAAVAAANAVANKPVEDPATELDSLPKTKN" FT misc_feature complement(1284341..1284913) FT /note="HMMPfam hit to PF01145, SPFH domain / Band 7 family" FT misc_feature complement(1284350..1284415) FT /note="FPrintScan hit to PR00721, Stomatin signature" FT misc_feature complement(1284398..1284874) FT /note="HMMSmart hit to SM00244, prohibitin homologues" FT misc_feature complement(1284416..1284472) FT /note="FPrintScan hit to PR00721, Stomatin signature" FT misc_feature complement(1284446..1284532) FT /note="ScanRegExp hit to PS01270, Band 7 protein family FT signature." FT misc_feature complement(1284473..1284544) FT /note="FPrintScan hit to PR00721, Stomatin signature" FT misc_feature complement(1284551..1284604) FT /note="FPrintScan hit to PR00721, Stomatin signature" FT misc_feature complement(1284644..1284709) FT /note="FPrintScan hit to PR00721, Stomatin signature" FT misc_feature complement(1284785..1284853) FT /note="FPrintScan hit to PR00721, Stomatin signature" FT misc_feature complement(1284842..1284922) FT /note="Signal peptide predicted for DIP1276 by SignalP 2.0 FT HMM (Signal peptide probability 0.797) with cleavage site FT probability 0.533 between residues 27 and 28" FT CDS complement(1284919..1285353) FT /transl_table=11 FT /locus_tag="DIP1277" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium avium MAV145 SWALL:O07404 FT (EMBL:AF002133) (145 aa) fasta scores: E(): 2.2e-11, 35.25% FT id in 139 aa, and to Streptomyces coelicolor putative FT integral membrane protein SC2H12.25 SWALL:Q9K459 FT (EMBL:AL359215) (146 aa) fasta scores: E(): 7.4e-11, 33.08% FT id in 136 aa" FT /protein_id="CAE49804.1" FT /translation="MGSLEWFVISVALVVLELFIGELTFFMLGLAAICAAGVGLVTDNV FT ALQAAAFSVSAISLLLFLKPLIKKHFELPTSLELTPRALIGMSGEVVKKITEHSGQIKL FT DGSIWSARSLDPAVNFQTGQSVCVVEIDGPTAVVWKESKT" FT misc_feature complement(order(1285153..1285218,1285234..1285335)) FT /note="2 probable transmembrane helices predicted for FT DIP1277 by TMHMM2.0" FT CDS complement(1285420..1286262) FT /transl_table=11 FT /locus_tag="DIP1278" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 29.4 FT kDa protein SCC77.24 SWALL:Q9RDD4 (EMBL:AL136503) (274 aa) FT fasta scores: E(): 1.3e-46, 50.57% id in 259 aa, and to FT Mycobacterium tuberculosis hypothetical 30.5 kDa protein FT Rv2033c or MTV018.20 SWALL:O53477 (EMBL:AL021899) (280 aa) FT fasta scores: E(): 6.7e-37, 46.78% id in 280 aa" FT /protein_id="CAE49805.1" FT /translation="MTFHDPYAGNILKGHSRNVPQQFPEVPAKPGLVVEVLADGFVGAV FT INFERTYDGDFIRLEDRYQHERLFKLRKGAFLIDGNRVTLTRFVEKKQPERSNSGSRKV FT KHVEAKVAAPSRIWVEGIHDAAIVEKIWGHDLRVEGVVVEYLEGLDNLPHQLAQFKPQL FT GRRVGVLADHLVEGSKETKLTESVGPDVLVTGHPYIDIWAAVKPERLGLREWPKVPYGE FT DWKMGICRRVGWADPKEGWNRVYNAVHSFRDVDSTLIGAVERLVDFVTTPELKKEDLL" FT CDS 1286298..1287083 FT /transl_table=11 FT /locus_tag="DIP1279" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49806.1" FT /translation="MNIRDNLYSPLQNASLWIGAWLYGHISIDDADYSLTELFGQGHLV FT GIGDGNHEIFRILRKNTDLHHRSALSEEPQFRLLLGGPGDPIYFPEDVRTTLGSQARSA FT PQAAIAVALAQPHTYGFLIPRGLDAQGRTQWHWITSAEPTRLPPALSPGEADFNLAEAT FT RYSAAFIEKKPNFRIPARNPRLTVGRLTDFYENPGLPEQVAPRALKLISRADTVASIVE FT GVTQSLQEHAFDPHLFPLAQHVRHARMAAVSYAFAEWGR" FT CDS complement(1287056..1288165) FT /transl_table=11 FT /locus_tag="DIP1280" FT /product="Putative ferrochelatase (protoheme biosynthesis)" FT /note="Similar to Streptomyces coelicolor probable FT ferrochelatase HemH or SC9B10.26 SWALL:HEMZ_STRCO FT (SWALL:O50533) (375 aa) fasta scores: E(): 1.7e-55, 45.45% FT id in 374 aa, and to Bacillus subtilis ferrochelatase HemH FT or HemF SWALL:HEMZ_BACSU (SWALL:P32396) (310 aa) fasta FT scores: E(): 2e-10, 28.34% id in 321 aa" FT /protein_id="CAE49807.1" FT /translation="MLPLPTWTLSDVDAILVLSFGGPEGQQDVIPFLENVTRGRGIPRE FT RLEEVAVHYRHFGGISPLNALNREIIGNIIEVLSSRGLEIPVYFGNRNWHPFVNDTAEK FT MVRDGVRNVAVFATSAWGGYSGCRQYDEDIVRMNHHLEEKELPTLNCLKLRQFFDHPLF FT IEEMSSVVFQAARELGISALDELQLHQKVVFTAHSIPEVANENSGRKEDGPLYSRQVYE FT AASLVAKHLGISQERYDVVWQSASGNGQIPWLEPDILDYAKCQHDEGVSELVVAPIGFI FT SDHMEVVWDLDHELQDLASDLGMSISRAATVGHTDSFATMIVELVEESLGVKPHQNLGT FT VPSKGCSFNGEPCEVNCCKPVQRPHSAKA" FT misc_feature complement(1287176..1288129) FT /note="HMMPfam hit to PF00762, Ferrochelatase" FT CDS complement(1288281..1289999) FT /transl_table=11 FT /locus_tag="DIP1281" FT /product="Putative invasion protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 49.8 kDa protein Rv1477 or MT1524 or MTV007.24 SWALL:O53168 FT (EMBL:AL021184) (472 aa) fasta scores: E(): 3.5e-21, 31.88% FT id in 577 aa, and C-terminal half similar to the whole FT length of Mycobacterium tuberculosis hypothetical invasion FT protein Inv1 SWALL:O33171 (EMBL:AF006054) (277 aa) fasta FT scores: E(): 1e-17, 39.5% id in 281 aa. Note: Contains two FT possible colied-coil region at residues 102..130 and FT 182..360" FT /protein_id="CAE49808.1" FT /translation="MTIRSSMSSRTTTKVMRGLIASGLSIACLGATSTVVAEPANPSDT FT EIASADSQVGVAQGEVSKLVASVSNSDSEIAALELEMGGLREAVNKALVDLHDAQSSAE FT RARQGVTVARKKLDDIQAEILKAQKTLDEISRSAYRQGAVPSGVAGVSGKATSEEALDR FT QTYLRTNAQKQREAVDALDRLRTEQANEESRLREVKNLAEKRESEAESAKASAQQAIDS FT SNSKLEENLRKRAELISKREEAQRGLDSARGNADSLRQQRSEYEEYKRAEEARKKAEAE FT AAAAEKARQEAEAARKAKEEAARIAAEAARKAADEAARKVAAEKAEKARQDAEKAAEAA FT QAQAEAERQASENRRSTANDSARAAAALIEAATPNHASLDDPYDSNSQDGNYIAAVEKE FT DNDSSILDDLDVAQVDSMEDVSKKASALVENASRSEKIEIVISRAMAYIGTPYAWGGGN FT ASGPTQGIRDGGVADSFGDFNKIGFDCSGLTLYAFAGVGIALPHYTGYQYQKGTKVDPS FT NMQRGDLIFYGPNAEYHVAIYLGDGTMLEAPQSGSSVKVSPVRWSGMSPYAVRLI" FT misc_feature complement(1288284..1288670) FT /note="HMMPfam hit to PF00877, NLP/P60 family" FT misc_feature complement(1288884..1289189) FT /note="ProfileScan hit to PS50310, Alanine-rich region." FT misc_feature complement(1289889..1289999) FT /note="Signal peptide predicted for DIP1281 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.712 between residues 37 and 38" FT CDS 1290514..1290717 FT /transl_table=11 FT /locus_tag="DIP1282" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49809.1" FT /translation="MSLTFTPCGGNCGSQSDKTVGNITTVLLECASGDDVGLLLQVLPN FT KSLLLHLRDFNALPLSHYDAKL" FT CDS 1290761..1293565 FT /transl_table=11 FT /gene="acnA" FT /gene_synonym="acn" FT /locus_tag="DIP1283" FT /product="aconitate hydratase" FT /EC_number="4.2.1.3" FT /note="Similar to Escherichia coli aconitate hydratase 1 FT AcnA or Acn or B1276 SWALL:ACO1_ECOLI (SWALL:P25516) (890 FT aa) fasta scores: E(): 1.6e-99, 55.9% id in 932 aa, and to FT Corynebacterium glutamicum aconitase Acn SWALL:Q9WXJ0 FT (EMBL:AB025424) (939 aa) fasta scores: E(): 0, 86.61% id in FT 934 aa" FT /protein_id="CAE49810.1" FT /translation="MTESKNSFNAKQTLEVGDKSYDYFALSAVKGMEKLPYSLKVLGEN FT LLRTEDGANITADHINAIANWDPSAEPSIEIQFTPARVLMQDFTGVPCVVDLATMREAV FT KTLGGDPDKVNPLNPAEMVIDHSVIIEAFGSTLALAKNVEIEYERNEERYQFLRWGSKA FT FSNFRVVPPGTGIVHQVNIENLARVVFDNNGLAYPDTCIGTDSHTTMENGLGILGWGVG FT GIEAEAAMLGQPVSMLIPRVVGFKLTGEIPAGVTATDVVLTITEMLREHGVVQKFVEFY FT GNGVKSIPLANRATIGNMSPEFGSTCAIFPIDEETVKYMHLTGRSEEQVALVEAYAKAQ FT GMWLEQDAPEAEYSEYLELDLSTVVPSIAGPKRPQDRILLTEAKEQFRKDLPDYCSAEP FT VDESLPAKRMDSEGAVQKEGEDVAGYNSSRAGHGESAAEGAAGRQSNPVVVSSPNGGEY FT TLDHGMVAIASITSCTNTSNPSVMIGAGLIARKAAAKGLKAKPWVKTICAPGSQVVDGY FT YKRADLWKDLEALGFYLSGFGCTTCIGNSGPLPEEISAAINENDLTATAVLSGNRNFEG FT RISPDVKMNYLVSPIMVIAYAIAGTMDFDFETQPLGQDIDGNDVFLKDIWPSTEEIEET FT IAGAISRELYEADYADVFKGDEQWQNLPTPEGKTFDWDEKSTYIRKAPYFDGMTMEPAP FT VSDIKGARVLAKLGDSVTTDHISPASSIKPGTPAAQYLDENGVARNDYNSLGSRRGNHE FT VMMRGTFANIRLQNQLVDIAGGYTRDFTKNGEQAFIFDACQNYKAAGIPLVVIAGKEYG FT TGSSRDWAAKGTNLLGVKAVITESFERIHRSNLIGMGVIPLQFPAGESHASLGLDGTET FT FDIEGIEELNNGVTPKTVHVTATKESGDQVEFDAVVRIDTPGEADYYRNGGILQYVLRN FT MINA" FT misc_feature 1290920..1291921 FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase)" FT misc_feature 1290980..1292560 FT /note="BlastProDom hit to PD000511, PD000511" FT misc_feature 1291187..1291228 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1291259..1291285 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1291346..1291387 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1291388..1291435 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1291574..1291615 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1291616..1291657 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1291856..1291900 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1292129..1292560 FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase)" FT misc_feature 1292153..1292203 FT /note="ScanRegExp hit to PS00450, Aconitase family FT signature 1." FT misc_feature 1292165..1292200 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT misc_feature 1292351..1292392 FT /note="FPrintScan hit to PR00415, Aconitase family FT signature" FT /note="ScanRegExp hit to PS01244, Aconitase family FT signature 2." FT misc_feature 1292942..1293469 FT /note="HMMPfam hit to PF00694, Aconitase C-terminal domain" FT CDS 1293673..1294245 FT /transl_table=11 FT /locus_tag="DIP1284" FT /product="Putative TetR-famlily transcriptional regulator" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT transcriptional regulator, TetR family MT1521 FT SWALL:AAK45786 (EMBL:AE007021) (187 aa) fasta scores: E(): FT 1.8e-40, 60.42% id in 187 aa, and to Deinococcus FT radiodurans transcriptional regulator, TetR family DR2148 FT SWALL:Q9RSH6 (EMBL:AE002049) (204 aa) fasta scores: E(): FT 9e-06, 30.48% id in 164 aa" FT /protein_id="CAE49811.1" FT /translation="MPVVSNTELSMRRQEILEGARRCFAEHGYEGATVRRLEETVGKSR FT GAIFHHFSDKENLFLALAREDAARMAEVVAENGLVEVMRDMLAHPERHDWLATRLEITK FT MLRTDPSFRNRWIEHQRVLDDAVLERLQRNAHLGRMRDDVPIDVLHTYLETVLDGFISR FT LASGGDTDNLERVLDLVEESVRSSQPS" FT misc_feature 1293718..1293759 FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT misc_feature 1293718..1293858 FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT misc_feature 1293781..1293852 FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT CDS 1294271..1294999 FT /transl_table=11 FT /locus_tag="DIP1285" FT /product="Conserved hypothetical protein" FT /note="Similar to Rhizobium loti Mll8746 protein FT SWALL:Q989X1 (EMBL:AP003008) (280 aa) fasta scores: E(): FT 3.4e-12, 28.57% id in 210 aa, and to Xylella fastidiosa GMP FT synthase XF0560 SWALL:Q9PFU7 (EMBL:AE003903) (240 aa) fasta FT scores: E(): 8.5e-09, 26.97% id in 215 aa" FT /protein_id="CAE49812.1" FT /translation="MTYMVSILLVSPRPGHDVATAERNDVLRATGLAPEQLEQVLIDDV FT EKHLPDFSRFDGIIVGGSPLNISNETYSDWQKHVHTELSRIVYSAIPSFFICYGNSFLV FT DLTGGTVGRTHPEDSGATIVSLTADGLTDRITRDLPTTFTSLTGHTENAICLGDSTVLL FT ATGDTCPIQMIRANETTWACQFHAEMDAQAMKTRMDFYKDYGYFSPEDYDAIVSSLPSI FT DTTYSNRVLRNFIEVCEGKR" FT misc_feature 1294580..1294606 FT /note="ScanRegExp hit to PS00144, Asparaginase / FT glutaminase active site signature 1." FT CDS 1295088..1295357 FT /transl_table=11 FT /locus_tag="DIP1286" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptococcus pneumoniae ACT domain FT protein SP0238 SWALL:Q97ST5 (EMBL:AE007336) (88 aa) fasta FT scores: E(): 4.7e-09, 45.34% id in 86 aa, and to Listeria FT monocytogenes LMO0533 protein 0533 SWALL:CAC98612 FT (EMBL:AL591975) (89 aa) fasta scores: E(): 4.8e-09, 40.22% FT id in 87 aa" FT /protein_id="CAE49813.1" FT /translation="MFAIISVTGADHTGIIAAVATKCADLGVNINNVSQTIMDGYFTMI FT LHVSFDDSATDIATIQESMADVEKDQNLVIRIQSQAIFDAMNII" FT misc_feature 1295094..1295309 FT /note="HMMPfam hit to PF01842, ACT domain" FT CDS 1295374..1296738 FT /transl_table=11 FT /locus_tag="DIP1287" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptococcus pneumoniae hypothetical FT protein SP0239 SWALL:AAK74419 (EMBL:AE007336) (445 aa) FT fasta scores: E(): 8e-101, 65.91% id in 446 aa, and to FT Neisseria meningitidis hypothetical protein NMA1908 FT SWALL:Q9JTA4 (EMBL:AL162757) (451 aa) fasta scores: E(): FT 4.7e-98, 62.1% id in 446 aa" FT /protein_id="CAE49814.1" FT /translation="MTTQHSYSSILETIEMIEKYRLDIRTVTMGISLLDCVRGTMQETC FT EAVYNKITTLAKDHVSVCEGIERELGIPIVNKRISVTPISLIASAVEGSPVEIAHALDK FT AAKTVGVNFIGGYSALVEKGMTAGDKNLIDSIPQALTETDLVCSSVNIGSSRSGINMDA FT VREMGIVVKKAAELTKDRSAIACAKLVVFANAVGDNPFMAGAFHGVEEPDCVVSVGVSG FT PGVVDRALGDLDGATLDQVAEAIKKAAFKITRAGQLVGNLASERLGVPFGIVDLSLAPT FT AELGDSVAHIMEHMGLDQVGTHGTTAALALLNDAVKKGGMMACSRVGGLSGSFIPVSED FT KGMIDAVRAGNISVDKLEAMTAICSVGLDMIAIPGDTSAELISGMIADEAAIGVMNHKT FT TAVRVIPVPGTKPGEEVNFGGLLGYAPVIPVSTVDNSAFIHRGGFIPAPVHGFRN" FT CDS complement(1296797..1297045) FT /transl_table=11 FT /locus_tag="DIP1288" FT /product="Conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical YxlE FT SWALL:P94373 (EMBL:D83026) (62 aa) fasta scores: E(): FT 0.028, 31.03% id in 58 aa" FT /protein_id="CAE49815.1" FT /translation="MKIFGSLISRLRAESELSDAHRSLILSLVATDVLLKSIAWHFLYH FT LPKSRINGPKYLWGLLTSAVGTIGPVAFLCVGIKYKN" FT misc_feature complement(order(1296812..1296877,1296908..1296973)) FT /note="2 probable transmembrane helices predicted for FT DIP1288 by TMHMM2.0" FT CDS complement(1297069..1298700) FT /transl_table=11 FT /locus_tag="DIP1289" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 ABC FT transporter, ATP-binding protein MT1519 SWALL:AAK45784 FT (EMBL:AE007021) (542 aa) fasta scores: E(): 2.2e-114, FT 70.95% id in 544 aa, and to Bacillus halodurans ABC FT transporter BH2025 SWALL:Q9KBA3 (EMBL:AP001514) (539 aa) FT fasta scores: E(): 6.5e-33, 32.07% id in 505 aa" FT /protein_id="CAE49816.1" FT /translation="MIVTNDFEVRVGARTLLNAPGQHLRVQPGDRIGLVGRNGAGKTTT FT MRILAGETQPYGGSVIRSGDIGYLPQDSREGNIDQTARDRVLSARGLDQIQASMERQQE FT IMETTEDEKKRDAAIRKYSRLEERYHALGGYEASSEAARICDNLGLPARILDQPLKTLS FT GGQRRRVELAQILFAASAGSGKSKTTLLLDEPTNHLDADSITWLRDFLSKHEGGLIMIS FT HDVELLDAVCNKIWFLDAVRGEADVYNMGFAKYKDARATDEARRRRERANAEKKAAALK FT DQAARLGAKATKAAAAKQMLARAERMVGSLDDVRVADRVAHISFPEPAPCGKTPLNAKG FT LTKMYGSLEVFAGVDLAIDKGSRVVVLGFNGAGKTTLLKLLAGVERTDGEGGIVTGHGL FT KIGYFAQEHDTIDPQKSVWQNTIDACPGAGEQDLRGLLGAFMFSGDQLEQPAGTLSGGE FT KTRLALAALVSSRANVLLLDEPTNNLDPISREQVLEALRTYTGAVVLVTHDPGAVKALE FT PERVIVLPDGDEDLWSEDYMEIVELA" FT misc_feature complement(1297117..1297623) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(1297120..1297620) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(1297135..1297341) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(1297297..1297341) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(1297549..1297614) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(1297576..1297599) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(1297978..1298616) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(1297978..1298619) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(1297990..1298217) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(1298143..1298166) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(1298173..1298217) FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature complement(1298548..1298610) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(1298572..1298595) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1298797..1299225) FT /transl_table=11 FT /locus_tag="DIP1290" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 12.4 kDa protein Rv1466 or MTV007.13 SWALL:O53157 FT (EMBL:AL021184) (115 aa) fasta scores: E(): 6.7e-24, 67.3% FT id in 104 aa, and to Deinococcus radiodurans conserved FT hypothetical protein DR2165 SWALL:Q9RSF9 (EMBL:AE002050) FT (149 aa) fasta scores: E(): 1.1e-13, 43.59% id in 117 aa" FT /protein_id="CAE49817.1" FT /translation="MTESNGNSEITTTEGNTGPVVESSLDPLAGRPEQSEDDIAKASDV FT EEYLRDVIDPELGINVVDLGLVYDIWMEGSIHAHVNMTLTSPACPLTDVIEDQAESAVV FT GNKVAETLTIHWVWMPPWGPHMITEDGREQLRALGFSV" FT misc_feature complement(1298824..1299096) FT /note="BlastProDom hit to PD005595, PD005595" FT misc_feature complement(1298878..1299105) FT /note="HMMPfam hit to PF01883, Domain of unknown function FT DUF59" FT CDS complement(1299222..1299671) FT /transl_table=11 FT /locus_tag="DIP1291" FT /product="Putative nitrogen fixation protein NifU-related FT protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT nitrogen fixation protein NifU-related protein MT1512 FT SWALL:AAK45776 (EMBL:AE007020) (162 aa) fasta scores: E(): FT 2.6e-35, 63.69% id in 146 aa, and to Bacillus subtilis FT NifU-like protein NifU SWALL:NIFU_BACSU (SWALL:O32163) (147 FT aa) fasta scores: E(): 3.7e-18, 44.21% id in 147 aa" FT /protein_id="CAE49818.1" FT /translation="MNLESMYQEVILDHYKNPLHAGLRESYDAEVHHVNPSCGDEITLR FT VHLSEDGLTVQDVSYDAEGCSISQASTSVMAEEIVGQPVDKALEKLAEFEKMITSRGKE FT EGDEDLIGDGIAFAGVSKYPARVKCALLGWKAFQAATSEALEGKV" FT misc_feature complement(1299282..1299656) FT /note="HMMPfam hit to PF01592, NifU-like N terminal domain" FT CDS complement(1299675..1300955) FT /transl_table=11 FT /gene="csd" FT /locus_tag="DIP1292" FT /product="probable cysteine desulfurase" FT /EC_number="4.4.1.-" FT /note="Similar to Mycobacterium tuberculosis probable FT cysteine desulfurase Csd or Rv1464 or MT1511 or MTV007.11 FT SWALL:CSD_MYCTU (SWALL:O53155) (417 aa) fasta scores: E(): FT 1.4e-99, 63.81% id in 409 aa, and to Escherichia coli FT selenocysteine lyase CsdB or SufS or B1680 SWALL:CSDB_ECOLI FT (SWALL:P77444) (406 aa) fasta scores: E(): 1.4e-63, 41.7% FT id in 410 aa" FT /protein_id="CAE49819.1" FT /translation="MHTQFVTEAGELNSEAIRAEFPILARTVRGDKPLIYLDSGATSQR FT PLRVWKAEEQFVLHTNAPVHRGAYQLAEEATDAYEEARDAIASFVGADGFELAFTKNAT FT EALNSVAYTLGDDRAGQYQVKAGDTVVVTELEHHANLVPWQELCRRTGATLKWYKVTPD FT GRIDLDSLELDESVKVVAFTHQSNVTGAVAPVAELVKRARAVDALVILDACQSVPHMAV FT DFHALDVDFAAFSGHKMCGPSGVGALYGKAEILEKLPPFLTGGSMISVVTMEETTFADI FT PQRFEAGTQMTSQVVGLGEAVKFLSEIGMDNISRHEHEITKYALEKLSKIKGLDIYGPR FT TAESRGAAVSFAVKRIHPHDLGQVLDDHGVCIRVGHHCAWPVHRELNAQSTARASFYLY FT NTIDEVDRLVEAIEAAKKFFGVSEEGK" FT misc_feature complement(1299732..1300823) FT /note="HMMPfam hit to PF00266, Aminotransferase class-V" FT misc_feature complement(1300212..1300271) FT /note="ScanRegExp hit to PS00595, Aminotransferases class-V FT pyridoxal-phosphate attachment site." FT CDS complement(1300955..1301713) FT /transl_table=11 FT /locus_tag="DIP1293" FT /product="Putative ABC transport system, ATP-binding FT subunit" FT /note="Similar to Streptomyces coelicolor putative ABC FT transporter ATP-binding subunit SCC22.04c SWALL:Q9XAD4 FT (EMBL:AL096839) (254 aa) fasta scores: E(): 4.3e-58, 70.4% FT id in 250 aa, and to Mycobacterium tuberculosis FT hypothetical 28.8 kDa protein Rv1463 or MTV007.10 FT SWALL:O53154 (EMBL:AL021184) (266 aa) fasta scores: E(): FT 8.8e-59, 70% id in 250 aa, and to Staphylococcus aureus FT (strain N315) SA0774 protein or SAV0842 SWALL:BAB57004 FT (EMBL:AP003131) (253 aa) fasta scores: E(): 1.7e-44, 58.63% FT id in 249 aa" FT /protein_id="CAE49820.1" FT /translation="MSTLEIKNLHAQVVPADESAAPKPILKGVNLTIKSGETHAIMGPN FT GSGKSTLAYTLSGHPRYEVTDGEVLLDGENILDMDIDERARAGLFLAMQYPTEIPGVSM FT ANFLRSAATAVRGEAPKLREWVKEVKQAQQDLKIDKAFNERSVNEGFSGGEKKRHEVLQ FT LDLLQPKFAVMDETDSGLDVDALRIVSEGINRYQEKSNGGILMITHYKRILNYVQPDFV FT HVFANGQIITSGGPELADDLEANGYDRFLA" FT misc_feature complement(1301030..1301608) FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature complement(1301087..1301263) FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT misc_feature complement(1301540..1301602) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(1301564..1301587) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1301742..1302917) FT /transl_table=11 FT /locus_tag="DIP1294" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 42.5 kDa protein Rv1462 or MT1509 or MTV007.09 FT SWALL:YE62_MYCTU (SWALL:O53153) (397 aa) fasta scores: E(): FT 7.7e-84, 56.05% id in 380 aa, and to Streptomyces FT coelicolor conserved hypothetical protein SCC22.06c FT SWALL:Q9XAD2 (EMBL:AL096839) (394 aa) fasta scores: E(): FT 6.1e-75, 52.86% id in 367 aa" FT /protein_id="CAE49821.1" FT /translation="MSTNKAATVHNNKGDLFSSFNVEDFDTPHGKDEVWRFISLRRLRG FT LHNGRFAQAVPAEIAIDAPENGVKVERVAKTDAKVGRAGAPIDRVSAQAFTSSKEAYVV FT TVARNAVVTEPIKISVTGQGNDATSFGHIVIDVEANAEALVDLRYTGTGTHADNVEFLI FT GDNARLTVIVDASWDNTAVHLSGQQAVLGRDAVLRHNVAVFGGEVVRLVPRVKFTQPGG FT DAEMLGIYFADDGQYFEQRLLVDHAVPQCRSNVLYKGAIQGDKNSPLPDAHATWVGDVL FT IRSGAQGTDTYEANRNLVLTDGARADAIPNLEIETGDIAGAGHAATVGRFDDEHEFYLR FT SRGIPQDEARRLIIRGFFSEVINRIPVDSVREDLENRVSEELKTFQNSRNA" FT misc_feature complement(1301835..1302605) FT /note="HMMPfam hit to PF01458, Uncharacterized protein FT family (UPF0051)" FT misc_feature complement(1301856..1301885) FT /note="ScanRegExp hit to PS00215, Mitochondrial energy FT transfer proteins signature." FT CDS complement(1302920..1304299) FT /transl_table=11 FT /locus_tag="DIP1295" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor conserved FT hypothetical protein SCC22.07c SWALL:Q9XAD1 (EMBL:AL096839) FT (473 aa) fasta scores: E(): 1.9e-154, 82.78% id in 459 aa, FT and to Staphylococcus aureus (strain N315) hypothetical FT protein SA0778 or SAV0846 SWALL:Q99VF9 (EMBL:AP003131) (465 FT aa) fasta scores: E(): 1.7e-123, 65.14% id in 459 aa" FT /protein_id="CAE49822.1" FT /translation="MGPYNYGWHDSDEAGKKARRGLDEDVVRYISAQKNEPEWMLEQRL FT KALNTFEKKPMPTWGPDLSYINFDDFKYYVRSTEKQATTWDDLPEDIKNTYDKLGIPEA FT EKQRLVAGVAAQYESEVVYHQIREDLETQGVIFLDTDTALKEHPELFQEYFGTVVPAGD FT NKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYV FT EGCTAPIYQSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVLNLVTQRSKVEEGGTMEWV FT DGNIGSKVTMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDTGAKMQHMAPYTSSNIVSKS FT VARSGGRAAYRGLVRVAANAHHSVSNVECDALLVDNISRSDTYPYNDIRNDHVSLGHEA FT TVSQVSEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSV FT G" FT misc_feature complement(1302998..1303759) FT /note="HMMPfam hit to PF01458, Uncharacterized protein FT family (UPF0051)" FT CDS complement(1304371..1305087) FT /transl_table=11 FT /locus_tag="DIP1296" FT /product="Putative DNA-binding protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 29.2 kDa protein Rv1460 or MTV007.07 SWALL:O53151 FT (EMBL:AL021184) (278 aa) fasta scores: E(): 3.4e-38, 46.25% FT id in 240 aa, and to Streptomyces coelicolor putative FT DNA-binding protein scc22.08C SWALL:Q9XAD0 (EMBL:AL096839) FT (252 aa) fasta scores: E(): 9e-27, 42.35% id in 229 aa" FT /protein_id="CAE49823.1" FT /translation="MAPAKKVETRSTDGETRRHIMLIMLKEGPVTATQLGQQLNLSATG FT IRRHLDILLDEGFAEISSVRRVACEKSRGRPAKAFKLTASGRSQFGHEYDSLAAEALAT FT LKESGGEAAVRAFARKRVEKILADVHVPDNIDDNQLAEVATQLVEAFSNNGYAATINNA FT ANGVQICQHHCPISGVAADFPELCEAEHEMIAKILGHHVQPLASIADGHDICTTNIPIT FT PILTPRKNTPTERSGS" FT misc_feature complement(1304842..1304880) FT /note="HMMPfam hit to PF02178, AT hook motif" FT misc_feature complement(1304935..1305000) FT /note="Predicted helix-turn-helix motif with score 1296 FT (+3.60 SD) at aa 30-51, sequence VTATQLGQQLNLSATGIRRHLD" FT stem_loop complement(1305276..1305322) FT /note="Score 50: 18/19 (94%) matches, 0 gaps" FT CDS complement(1305304..1305666) FT /transl_table=11 FT /locus_tag="DIP1296A" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49824.1" FT /translation="MFQNILHTEDLSGWILATNVVNGVLVKRGLSAKFPRNSRIFKGHS FT EGGVTPVHILLHECRLAVVRISFGVQCCRYFRKIWINGLNECCGLVVRNLHFCWPLENY FT RNTWGSVEKSVTFQRY" FT CDS 1305862..1307424 FT /transl_table=11 FT /locus_tag="DIP1297" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 62.7 kDa protein Rv1459c or MT1506 or MTV007.06c FT SWALL:AAK45770 (EMBL:AL021184) (591 aa) fasta scores: E(): FT 2.6e-33, 36.63% id in 546 aa, and to Mycobacterium FT tuberculosis putative membrane protein Rv2174 or MT2230 or FT MTV021.07 SWALL:O53508 (EMBL:AL021957) (516 aa) fasta FT scores: E(): 2.1e-18, 30.6% id in 464 aa, and low FT similarity to Rhizobium meliloti putative cytochrome C FT oxidase polypeptide I transmembrane protein CtaD or R00905 FT or SMC00010 SWALL:Q92RG9 (EMBL:AL591785) (562 aa) fasta FT scores: E(): 1.6, 22.94% id in 475 aa" FT /protein_id="CAE49825.1" FT /translation="MRSVLRSPGTKGSTLTFSELHRFARIRWLGTIGALLLGLGGLGAG FT ALPVVGNPYTGFPAGSLMSRMLQTSMIMCFIGVGFIVVAWLLMAPFVGVINHHSRHSQT FT LVSVSLLRRTFAAWSLPILLSAPMFTQDIYSYIANGRILKLGLDPYSAGPVDLLGADNP FT LARSVPFIWAHSPSPYGPVALGLAKVISIVTDDSIVWSVFCHRALSIAGIALAGWAISR FT LAIRCRVFPQAALWLGLLNPLTILHLVGGIHNEAILLGLLLAGFEVGLRACTLLSLERY FT GLVAFFLFLSINMISSAGMVKVTGFIGLGFIGMAFARALYLHGFNHWKALSISTTLHFF FT GFVASIAFVTLVSGISLGWVTGQGGAVSIRSWMSISTAIGVIFGWFGMLLGLGDHTEAI FT LVVTRAAGIFVALAAMVRMLVATYVGRIAAIGGLGVSTFILVICFPVVHPWYMLWAILP FT LAAWANRRLFRYTVIGYSALLSFFVLPRGLSLPPVTVLSIYLGSITSFIIFVLFVRWIF FT NRR" FT misc_feature order(1305943..1306011,1306075..1306143,1306204..1306272, FT 1306453..1306521,1306558..1306617,1306627..1306695, FT 1306708..1306761,1306771..1306839,1306876..1306944, FT 1306972..1307040,1307059..1307127,1307155..1307223, FT 1307260..1307316,1307344..1307412) FT /note="14 probable transmembrane helices predicted for FT DIP1297 by TMHMM2.0" FT CDS 1307491..1308402 FT /transl_table=11 FT /locus_tag="DIP1298" FT /product="Putative ABC transport system ATP-binding FT protein" FT /note="Similar to Mycobacterium tuberculosis FT ABC-transporter ATP-binding protein Rv1458c or MTV007.05c FT SWALL:O53149 (EMBL:AL021184) (313 aa) fasta scores: E(): FT 2e-48, 50.32% id in 304 aa, and to Streptomyces peucetius FT daunorubicin resistance ATP-binding protein DrrA FT SWALL:DRRA_STRPE (SWALL:P32010) (330 aa) fasta scores: E(): FT 1.5e-24, 34.09% id in 305 aa" FT /protein_id="CAE49826.1" FT /translation="MLSLTNLVKSFGEKQAVAGITLSVYQGEVFALLGPNGAGKSTTIQ FT MCEGFIKPSSGSVTILGMNPATEGDAVRQQIGIMLQSGGSYSGIRVSEMLYLAASYSEN FT PLDPEWLLDVLGLQGVRKTTYRRLSGGQQQRLSLALAIIGRPRMVFLDEPTAGLDAQSR FT LVVWDLISSLKRDGVTVILTTHLMDEAQALADRVAIIDRGKIITSGTTQELLTSAPGQQ FT TAVMTTAAPLEISKIIAAIPNLAISELRPLRYRVASADLAGALSKLARVARQKNVLITS FT WTTDTQNLEDIFLSITGNELRS" FT misc_feature 1307566..1308102 FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature 1307569..1308099 FT /note="HMMPfam hit to PF00005, ABC transporter" FT misc_feature 1307575..1307652 FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature 1307590..1307613 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1307872..1307916 FT /note="ScanRegExp hit to PS00211, ABC transporters family FT signature." FT misc_feature 1307872..1308087 FT /note="ProfileScan hit to PS50100, 2nd half motif for FT nucleotide binding, associated with P-loop." FT CDS 1308405..1309202 FT /transl_table=11 FT /locus_tag="DIP1299" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 27.4 kDa protein Rv1457c or MTV007.04c SWALL:O86349 FT (EMBL:AL021184) (261 aa) fasta scores: E(): 1.5e-31, 41.47% FT id in 258 aa, and to Mycobacterium smegmatis hypothetical FT 24.4 kDa protein SWALL:O87317 (EMBL:AF027770) (236 aa) FT fasta scores: E(): 1.1e-23, 37.55% id in 237 aa" FT /protein_id="CAE49827.1" FT /translation="MPKLNEPFQSTVSRFPAGIFEPHPVQASILKMLTSQGRIEAKLFL FT RHGEQILLSFVIPVISIVAISFLHIVDEPTPLLVTLPVMLTMASLSSGFTGQAISLAFD FT RRYGALQRVGASGVPSWTIVLGKVIGVLTVSILQVLVISCIAFALGWRVTPSAYFCGMA FT VFFLGVATFTALGLLMGGTLSSELVLGLANLIWFGLIGIVSFVVFRNGSESSTWMSIVP FT SVAVGKGMSLAFAGIVPIKECVILLFWLVLGALGATRWFKFNS" FT misc_feature order(1308555..1308614,1308633..1308701,1308786..1308854, FT 1308873..1308941,1308969..1309028,1309089..1309157) FT /note="6 probable transmembrane helices predicted for FT DIP1299 by TMHMM2.0" FT CDS 1309283..1310221 FT /transl_table=11 FT /locus_tag="DIP1300" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 32.4 kDa protein Rv1456c or MT1503 or MTV007.03C FT SWALL:AAK45767 (EMBL:AL021184) (311 aa) fasta scores: E(): FT 3.7e-43, 43.75% id in 304 aa, and to Streptomyces FT coelicolor putative integral membrane transport protein FT SCC22.12 SWALL:Q9XAC6 (EMBL:AL096839) (356 aa) fasta FT scores: E(): 6.9e-24, 33.01% id in 312 aa, and low FT similarity to Bacillus firmus cytochrome aa3 controlling FT protein ctaA SWALL:CTAA_BACFI (SWALL:Q04443) (297 aa) fasta FT scores: E(): 0.0021, 21.42% id in 266 aa" FT /protein_id="CAE49828.1" FT /translation="MTTPDLRSHISQPRKFAPTISTQRRLAMALLFAQGGITITGSIVR FT VTGSGLGCNTWPNCHEGSLVPVQGAAPWIHQAIEFGNRLLTFVLVGIAISVFVAVYSTG FT RRKEIKINAWIQCLGIVVQAVIGGISVHLDLRWWAVAVHFLPSVFLVWMAAILYVRLAE FT PDDGEVVYPFAGSLRILAAFSAFLLSLVLVTGTMTTGAGVHSGDSGVGMEGRLDVDIDW FT MAHVHAWSMYVYLALTLLLVVGLALQMAPKRAQNVGWMLILMIIIQALIGVIQYRLGVP FT RWTVPVHIGMCSVVVAFCAFLWAEGKQRVSV" FT misc_feature 1309328..1310203 FT /note="HMMPfam hit to PF02628, Cytochrome oxidase assembly FT protein" FT misc_feature order(1309358..1309426,1309535..1309594,1309613..1309681, FT 1309691..1309759,1309817..1309885,1309964..1310032, FT 1310051..1310119,1310132..1310200) FT /note="8 probable transmembrane helices predicted for FT DIP1300 by TMHMM2.0" FT CDS complement(1310339..1311271) FT /transl_table=11 FT /locus_tag="DIP1301" FT /product="Putative farnesyltransferase" FT /note="Similar to Mycobacterium leprae CyoE SWALL:Q49685 FT (EMBL:U00013) (300 aa) fasta scores: E(): 3.3e-61, 56.75% FT id in 296 aa, and to Escherichia coli protoheme IX FT farnesyltransferase CyoE or B0428 or Z0531 or ECS0482 FT SWALL:CYOE_ECOLI (SWALL:P18404) (296 aa) fasta scores: E(): FT 1.9e-20, 30.34% id in 290 aa" FT /protein_id="CAE49829.1" FT /translation="METIKAYVALTKPRVIELLLVATIPAMLQAERGENNIGLILLTLL FT GGWMGAAAANTFNMVADSDIDQKMGRTRARPLVRNKVSNRHASVFAWTLTVVSFLWLWV FT LCRSVLAGLFILLTIFFYIFVYTKYLKRKTHLNIVWGGAAGCMPVVVGWAVITDNLPAG FT TPAQWWQAIVLFMVIFFWTPPHTWALAMKYKDDYARAGVPMLPVVRTPVEVTRQIVWYT FT VATVLTTFLLIPAASWIHAIIAVVSGVWFLVMAVRLHNGIKNGGEVKPLKLFILSNNYL FT AVYFVGLSIDAVLGWETIGGHLGWTTTFF" FT misc_feature complement(order(1310384..1310449,1310489..1310554, FT 1310567..1310617,1310705..1310770,1310801..1310857, FT 1310894..1310944,1310960..1311025,1311089..1311154, FT 1311185..1311250)) FT /note="9 probable transmembrane helices predicted for FT DIP1301 by TMHMM2.0" FT misc_feature complement(1310396..1311226) FT /note="HMMPfam hit to PF01040, UbiA prenyltransferase FT family" FT CDS 1311649..1313751 FT /transl_table=11 FT /gene="tkt" FT /locus_tag="DIP1302" FT /product="transketolase" FT /EC_number="2.2.1.1" FT /note="Similar to, although longer in its N-terminal region FT than Corynebacterium glutamicum transketolase Tkt FT SWALL:Q9Z475 (EMBL:AB023377) (676 aa) fasta scores: E(): 0, FT 81% id in 674 aa, and to Mycobacterium leprae transketolase FT Tkt or ML0583 or MLCl536.38 or B1496_F1_26 SWALL:TKT_MYCLE FT (SWALL:P46708) (699 aa) fasta scores: E(): 1.2e-181, 64.71% FT id in 700 aa, and similar to, although longer in its FT N-terminal region than the eukaryotic Kluyveromyces lactis FT transketolase Tkl1 SWALL:TKT1_KLULA (SWALL:Q12630) (679 aa) FT fasta scores: E(): 7.3e-99, 44.2% id in 681 aa" FT /protein_id="CAE49830.1" FT /translation="MTLSPELQALTSRHYPSDWDDLDTQAVDTARVLAADAVQNCGSGH FT PGTAMSLAPLAYTLFQRVMNVDPADPHWAGRDRFVLSCGHTSLTQYIQLYFGGYGLELE FT DLKALRTWGALTPGHPEYRHTKGVEITTGPLGQGLASAVGMAMASRRERALFDPTAADG FT ASPFDHYIYVIASDGDLQEGVTAEACSLAGTQKLGNLIVFWDDNRISIEEDTEIAFNEK FT VVDRYRAYNWQVIEIDGGENVEAIEKAVAEAKADTSRPTFIRVRTVIGYPAPTKMNTGA FT VHGAALGAEEVAGTKKALGFNPEESFAVAPEVISHTRKLLERGAQRHAEWREHFESWAE FT TNPENKALFDRMASRELPDGFDADLPSWEPDAKGVATRKASEATLQALGATLPELWGGS FT ADLAGSNNTVIKGSPSFGPSTISTSTWTAEPGGRNLHFGIREHAMGAIINGISLHGGTR FT PYGGTFLIFSDYMRPAVRLAALMGTDAYYVWTHDSIGLGEDGPTHQPVEQLASLRAIPG FT VSMLRPADANETAAAWRAALLYKEGPKGLALTRQNVLVLEGTKEKARDGVSRGAYVLVE FT GSKKTPDVILMASGSEVQLAVEAAKTLEAEKIAARVVSVPCLDWFEEQDAAYQEEILPQ FT AVSARVSVEAGVALSWYRHLGTHGRAVSLEHFGASAPYEKLFSEFGITTEAVIAAARES FT LAAAQQ" FT misc_feature 1311712..1312722 FT /note="HMMPfam hit to PF00456, Transketolase, thiamine FT diphosphate binding domain" FT misc_feature 1311739..1311801 FT /note="ScanRegExp hit to PS00801, Transketolase signature FT 1." FT misc_feature 1312768..1313313 FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domain" FT misc_feature 1313137..1313187 FT /note="ScanRegExp hit to PS00802, Transketolase signature FT 2." FT misc_feature 1313359..1313709 FT /note="HMMPfam hit to PF02780, Transketolase, C-terminal FT domain" FT CDS 1313875..1314957 FT /transl_table=11 FT /gene="tal" FT /locus_tag="DIP1303" FT /product="transaldolase" FT /EC_number="2.2.1.2" FT /note="Similar to Mycobacterium tuberculosis transaldolase FT Tal or Rv1448c or MT1495 or MTCY493.06 SWALL:TAL_MYCTU FT (SWALL:O06812) (373 aa) fasta scores: E(): 1.5e-75, 60.05% FT id in 358 aa, and N-terminal similar to N-terminal region FT of Escherichia coli transaldolase A TalA or B2464 or Z3720 FT or ECS3326 SWALL:TALA_ECOLI (SWALL:P78258) (316 aa) fasta FT scores: E(): 0.0022, 30.67% id in 163 aa" FT /protein_id="CAE49831.1" FT /translation="MTAIDQLKNVGTSTWLDDLSRDRLQSGNLAELIKSKSIVGVTTNP FT AIFAAAMSKGTAYDSQIEKLKAAQADADSAVYAMSIDDVRAACDVFSEIYAESEGKDGR FT VSIEVDPRISEDRDATISQARELWNKVNRPNVMIKIPATRGSLPAITDALAEGISVNVT FT LIFSVARYREVIAAYIEGIKKAAENGLNVSQIHSVASFFVSRLDTEVDKRLEQIGSDEA FT LSLRGKAGVANAQRAYAVFLEAFQAADLPVGAHVQRPLWASTGVKNPDYSPTFYVSELA FT GPDTVNTMPESTIDAVLAADDIHGDTLSSSSDSANEIFTRISQTGIDFEDVFAVLEQEG FT VDKFVAAWSDLLDSMESRLK" FT misc_feature 1313911..1314939 FT /note="HMMPfam hit to PF00923, Transaldolase" FT misc_feature 1313992..1314018 FT /note="ScanRegExp hit to PS01054, Transaldolase signature FT 1." FT CDS 1315019..1316668 FT /transl_table=11 FT /gene="zwf" FT /gene_synonym="zwf2" FT /locus_tag="DIP1304" FT /product="glucose-6-phosphate 1-dehydrogenase" FT /EC_number="1.1.1.49" FT /note="Similar to, although longer in its N-terminal region FT than Mycobacterium tuberculosis glucose-6-phosphate FT 1-dehydrogenase Zwf or Zwf2 or Rv1447c or MT1494 or FT MTCY493.07 SWALL:G6PD_MYCTU (SWALL:O08407) (514 aa) fasta FT scores: E(): 5.5e-149, 69.27% id in 511 aa, and to Nostoc FT punctiforme glucose-6-phosphate 1-dehydrogenase Zwf FT SWALL:G6PD_NOSPU (SWALL:P48848) (509 aa) fasta scores: E(): FT 1.3e-86, 42.82% id in 509 aa" FT /protein_id="CAE49832.1" FT /translation="MPNVSKPVANGNTVESNNAELAFGGVDFSYSDTHENSCSRTSSKW FT VNPLRDAEDKRLPRIAGPCGMVIFGVTGDLARKKLLPAIYDLAHRGLLPAGFSLVGYGR FT RGWSKADFENYVKQAVVAGARTDFRENVWARLAEGMHFVQGNFDDDAAFDSLASLLADL FT DQTRGTAGNWAFYLSVPPDYFSDVCHQLQRSGMATAEGNSWRRVIVEKPFGHDQESARQ FT LNNLINSVFPEKSVFRIDHYLGKETVQNIMALRFANQLFDPLWNSHYVDHVQITMAEDI FT GLGGRAGYYDGIGAARDVIQNHLIQLLALVAMEEPVAFTPQELQAEKIKVLRATRPVEP FT FAKTTARGQYSRGWQGSELVQGLREEDGFDPNSGTETYAACTLEINSRRWAGVPFYLRT FT GKRLGRRVTEIALVFKDAPHQPFSEGSRHSQGRNVVVIRVQPDEGMLMRFGSKVPGNTM FT EVRDVNMDFSYSEAFTEESPEAYERLILDALLDEASLFPTNEEVELSWQILDPILNFWS FT DRGQPEEYPAGTWGPAGADKMLEREGRAWRRP" FT misc_feature 1315193..1315768 FT /note="HMMPfam hit to PF00479, Glucose-6-phosphate FT dehydrogenase, NAD binding domain" FT misc_feature 1315217..1316614 FT /note="BlastProDom hit to PD001129, PD001129" FT misc_feature 1315634..1315675 FT /note="FPrintScan hit to PR00079, Glucose-6-phosphate FT dehydrogenase signature" FT misc_feature 1315706..1315792 FT /note="FPrintScan hit to PR00079, Glucose-6-phosphate FT dehydrogenase signature" FT misc_feature 1315736..1315756 FT /note="ScanRegExp hit to PS00069, Glucose-6-phosphate FT dehydrogenase active site." FT misc_feature 1315772..1316665 FT /note="HMMPfam hit to PF02781, Glucose-6-phosphate FT dehydrogenase, C-terminal domain" FT misc_feature 1315862..1315915 FT /note="FPrintScan hit to PR00079, Glucose-6-phosphate FT dehydrogenase signature" FT misc_feature 1315916..1315966 FT /note="FPrintScan hit to PR00079, Glucose-6-phosphate FT dehydrogenase signature" FT misc_feature 1316183..1316263 FT /note="FPrintScan hit to PR00079, Glucose-6-phosphate FT dehydrogenase signature" FT CDS 1316693..1317652 FT /transl_table=11 FT /locus_tag="DIP1305" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor hypothetical 37.7 FT kDa protein SCC22.20 SWALL:Q9XAB8 (EMBL:AL096839) (351 aa) FT fasta scores: E(): 1.5e-36, 41.82% id in 318 aa, and to FT Mycobacterium tuberculosis hypothetical 32.7 kDa protein FT OpcA or Rv1446c or MT1493 or MTCY493.08 SWALL:AAK45756 FT (EMBL:Z95844) (303 aa) fasta scores: E(): 9.5e-35, 39.3% id FT in 318 aa" FT /protein_id="CAE49833.1" FT /translation="MIFTLPNTTTQEIAKTLVKIRDTGGQVTTSRVLTLIVVARDTSDV FT EGIIRATNEASQEHPSRVIILVAGSHEGESQVDAEVRIGGDAGASEMILIKLAGRVAKH FT LVHVVTPLLLPDTPIVAWWPSSAPINPAEDPIGKIAQRRITDSHFDPPVDALYNRRNHY FT APGDSDFSWARLTPWRGVLASSLDQAPYEMVQDVRVYGESDCPSVDLAAGWLCERLGIS FT VERHNYGSGSAAFDDAGLAKIPVKRIELERPSGCVVIEALDDDQTLSVSIPGRSTAHVA FT VTRRSQADCLAEELRHLDPDIAYARALRGLSRVSYPTQ" FT CDS 1317678..1318394 FT /transl_table=11 FT /locus_tag="DIP1306" FT /product="Putative phosphogluconolactonase" FT /note="Similar to Synechocystis sp FT 6-phosphogluconolactonase Pgl or DevB or SLL1479 FT SWALL:6PGL_SYNY3 (SWALL:P74618) (239 aa) fasta scores: E(): FT 3.8e-18, 35.88% id in 209 aa, and to Mycobacterium FT tuberculosis 6-phosphogluconolactonase Pgl or DevB or FT Rv1445c or MT1492 or MTCY493.09 SWALL:6PGL_MYCTU FT (SWALL:O06814) (247 aa) fasta scores: E(): 2.6e-17, 44.39% FT id in 241 aa" FT /protein_id="CAE49834.1" FT /translation="MVEVIRVSDLDAVIQEAHRRFLQVIDDVVSNGGVHGDGVARIVLT FT GGGAGIGLLKELSHSSIDWSKIHVFFGDERNVPVTHPDSNEGQAREVLLNRIAIPSSNI FT HGFHLNGGEMSTPASAYSECINKYAPRGFDLHLLGMGGEGHINSLFPDSSAIKEDVHLV FT SVVTDSPKPPAQRVSLTLPAVNSSARVWLLVAGAEKAEAAQHVVAASPADQWPAAGVHG FT TKETLLILDNSAAQLL" FT misc_feature 1317744..1318391 FT /note="HMMPfam hit to PF01182, Glucosamine-6-phosphate FT isomerases/6-phosphogluconolactonase" FT stem_loop complement(1318400..1318464) FT /note="Score 89: 31/32 (96%) matches, 0 gaps" FT CDS complement(1318462..1318695) FT /transl_table=11 FT /gene="secG" FT /locus_tag="DIP1307" FT /product="protein transport/translocation membrane protein" FT /note="Similar to Corynebacterium glutamicum protein-export FT membrane protein SecG SWALL:SECG_CORGL (SWALL:Q9Z469) (77 FT aa) fasta scores: E(): 7.3e-22, 82.89% id in 76 aa, and to FT Escherichia coli protein-export membrane protein SecG or FT B3175 or Z4537 or ECS4054 SWALL:SECG_ECOLI (SWALL:P33582) FT (110 aa) fasta scores: E(): 0.55, 26.02% id in 73 aa" FT /protein_id="CAE49835.1" FT /translation="MALALEIILVAASVIMTLFVLLHRGKGGGLSSLFGGGVQSNLSGS FT TVVEKNLDRVTIFTGLIWIACIVALNLIQAYK" FT misc_feature complement(order(1318477..1318530,1318624..1318689)) FT /note="2 probable transmembrane helices predicted for FT DIP1307 by TMHMM2.0" FT CDS complement(1318869..1319651) FT /transl_table=11 FT /gene="tpiA" FT /gene_synonym="tpi" FT /locus_tag="DIP1308" FT /product="triosephosphate isomerase" FT /EC_number="5.3.1.1" FT /note="Similar to Corynebacterium glutamicum FT triosephosphate isomerase TpiA or Tpi SWALL:TPIS_CORGL FT (SWALL:P19583) (259 aa) fasta scores: E(): 9.4e-84, 87.59% FT id in 258 aa, and to Bacillus subtilis triosephosphate FT isomerase TpiA or Tpi SWALL:TPIS_BACSU (SWALL:P27876) (253 FT aa) fasta scores: E(): 3e-38, 46.58% id in 249 aa" FT /protein_id="CAE49836.1" FT /translation="MARTPLIAGNWKMNLDHLQAVATVQKLAFALPKEYYEKVDVAVTV FT PFTDLRSVQTLIEGDKLAITYGAQDVSQHEAGAYTGEISAQMLAKLGCTWVVVGHSERR FT EYHGESSELVAVKAKAALNQGISPIVCVGEPLEIREAGTHVEYVVEQTRASLAGLTADD FT LAKTVIAYEPVWAIGTGKVASAADAQEVCAAIRNLIIELAGKEVAEGLRILYGGSVKAE FT TVAEIVGQPDVDGGLVGGASLDGEAFAKLAANAATVVD" FT misc_feature complement(1318878..1319645) FT /note="BlastProDom hit to PD001005, PD001005" FT /note="HMMPfam hit to PF00121, Triosephosphate isomerase" FT misc_feature complement(1319112..1319144) FT /note="ScanRegExp hit to PS00171, Triosephosphate isomerase FT active site." FT CDS complement(1319763..1320980) FT /transl_table=11 FT /gene="pgk" FT /locus_tag="DIP1309" FT /product="Phosphoglycerate kinase" FT /EC_number="2.7.2.3" FT /note="Similar to Corynebacterium glutamicum FT phosphoglycerate kinase Pgk SWALL:PGK_CORGL (SWALL:Q01655) FT (403 aa) fasta scores: E(): 8.9e-111, 74.5% id in 404 aa, FT and to Bacillus subtilis phosphoglycerate kinase Pgk FT SWALL:PGK_BACSU (SWALL:P40924) (394 aa) fasta scores: E(): FT 1.4e-66, 51.47% id in 406 aa" FT /protein_id="CAE49837.1" FT /translation="MAIKTLKDLLAEGVEGRHVLVRSDFNVPLNDDREITDAGRITASL FT PTIKALVDNGARVILMAHLGRPKGEVNEKFSLAPVAEALSEALGQYVALAGDVVGEDAH FT ERANGLNDGDVLLLENVRFDPRETSKEEAERGEFADQLVALTAENGAFVSDGFGVVHRA FT QASVFDVAQRLPHYAGTLVEKELEVLGNKVASAPERPYAVILGGAKVSDKLGVIEALAT FT KADKLIIGGGMCYTFLAAKGINVQKSLLQEEQINKCKELLEAYADKIVLPVDLVAAAEF FT ASDAENKIVAIDEIPEGWMSLDVGPKTVEKFAEVLATSKTVFWNGPMGVFEFENFSAGT FT RGVAEAIIAATANGAFSVVGGGDSAAAVRLLGLDEDGFSHISTGGGASLELLEGKNLPG FT VSVLES" FT misc_feature complement(1319766..1320980) FT /note="HMMPfam hit to PF00162, Phosphoglycerate kinase" FT misc_feature complement(1319787..1319840) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1319877..1319912) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1319943..1320020) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1320318..1320377) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1320381..1320449) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1320471..1320539) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1320597..1320644) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1320810..1320878) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1320894..1320944) FT /note="FPrintScan hit to PR00477, Phosphoglycerate kinase FT family signature" FT misc_feature complement(1320897..1320929) FT /note="ScanRegExp hit to PS00111, Phosphoglycerate kinase FT signature." FT stem_loop complement(1321035..1321070) FT /note="Score 54: 17/17 (100%) matches, 0 gaps" FT CDS complement(1321111..1322115) FT /transl_table=11 FT /gene="gap" FT /locus_tag="DIP1310" FT /product="glyceraldehyde 3-phosphate dehydrogenase" FT /EC_number="1.2.1.12" FT /note="Similar to Corynebacterium glutamicum glyceraldehyde FT 3-phosphate dehydrogenase Gap SWALL:G3P_CORGL FT (SWALL:Q01651) (336 aa) fasta scores: E(): 5.5e-99, 80% id FT in 330 aa, and to Streptomyces coelicolor glyceraldehyde FT 3-phosphate dehydrogenase Gap or SCC54.07c SWALL:G3P_STRCO FT (SWALL:Q9Z518) (336 aa) fasta scores: E(): 1.1e-84, 67.26% FT id in 336 aa" FT /protein_id="CAE49838.1" FT /translation="MTIRVGINGFGRIGRNFYRAITERGADIEVVAINDLTDNHTLSHL FT LKYDSILGRLGKEVSYDDESITVDGHRMVVTAERDPKNLKWGELNVDIVVESTGFFTDA FT NAAKAHIEAGAKKVIISAPAKNEDATFVVGVNHTDYDPAKHNIISNASCTTNCLAPMAK FT VLDEKFGIVKGLMTTIHAYTGDQRLHDAPHRDLRRARAAAQNIVPTSTGAAKAVALVLP FT ELKGKLDGFAMRVPVITGSATDLTFETTKEVSAEEINAAMKEAAEGELKGVLAYTEDPI FT VSTDIVTDAHASIFDAGLTKVIGNQVKVVSWYDNEWGYSNQLVSLTEYVGERL" FT misc_feature complement(1321177..1321656) FT /note="HMMPfam hit to PF02800, Glyceraldehyde 3-phosphate FT dehydrogenase, C-terminal domain" FT misc_feature complement(1321261..1321308) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT misc_feature complement(1321375..1321428) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT misc_feature complement(1321546..1321596) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT misc_feature complement(1321621..1321677) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT misc_feature complement(1321642..1321665) FT /note="ScanRegExp hit to PS00071, Glyceraldehyde FT 3-phosphate dehydrogenase active site." FT misc_feature complement(1321657..1322112) FT /note="HMMPfam hit to PF00044, Glyceraldehyde 3-phosphate FT dehydrogenase, NAD binding domain" FT misc_feature complement(1321747..1321788) FT /note="FPrintScan hit to PR00078, FT Glyceraldehyde-3-phosphate dehydrogenase signature" FT stem_loop complement(1322441..1322486) FT /note="Score 60: 20/20 (100%) matches, 0 gaps" FT CDS complement(1322488..1323474) FT /transl_table=11 FT /locus_tag="DIP1311" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 34.9 kDa protein CY21B4.41 Rv1423 or MT1466 or MTCY21B4.41 FT or MTCY493.31c SWALL:AAK45731 (EMBL:Z80108) (327 aa) fasta FT scores: E(): 4.2e-71, 61.84% id in 325 aa, and to FT Streptomyces coelicolor WhiA SWALL:Q9S4Y1 (EMBL:AF106003) FT (330 aa) fasta scores: E(): 3.7e-67, 57.53% id in 325 aa" FT /protein_id="CAE49839.1" FT /translation="MGALSAQVKDELIKVSSTKQRSRIAELASIIRFAGSIDSALGKTV FT IEIELDNEAVAIRVAKEIEELFAISAKLVDLGPMATRRTPRHVVRIAEDAETLIRRVGL FT VTRSGHAVVGLPPQIISGSISDAEAAWRGAFLAAGQLSDPGRTSGLEVACPCLEASLAL FT VGCARRLGLSAKPKETRGVEKVVIRDGEAVGALLSRMGAHKTRLVWDQKRARREARPLG FT NRLANFDDANLRRSARAAVAAAARVERAMTILGDDVPDHLAQAGQLRVQHRQASLEELG FT RLADPQMTKDAVAGRIRRLLHMADKKASDMGIPDTSVVVTEELLDDF" FT misc_feature complement(1322560..1323465) FT /note="HMMPfam hit to PF02650, Uncharacterized BCR, FT COG1481" FT CDS complement(1323568..1324539) FT /transl_table=11 FT /locus_tag="DIP1312" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0564 SWALL:Q9CCN9 (EMBL:AL583918) (359 aa) fasta scores: FT E(): 2.7e-63, 57.6% id in 309 aa, and to Escherichia coli FT hypothetical protein YbhK or B0780 SWALL:YBHK_ECOLI FT (SWALL:P75767) (302 aa) fasta scores: E(): 1.5e-11, 31.95% FT id in 291 aa" FT /protein_id="CAE49840.1" FT /translation="MNKLDTSQLKIASMGGGHGLFQTLRAVRQLNPASIDAIVTVADDG FT GSSGRIRRELGQIPPGDLRMALAALAPFDDEGLQWETLLQHRFGGHGALAGHAVGNLII FT AGLCDTLGSEIAALDAVAKVIKAEGRVLPACAEPLEIAAEVSGLDDDPRIMREVIGQVA FT VASTPGTVRRVRLIPERPEATEESVEAIENADLVTLGPGSWFSSVIPHVLVPGIPTALA FT TTKALRVVVLNLSPEPGETAGFTAERHIHILSQHAQTLRADVILVDEGLIPHKGERVHL FT ERAAAVLGAQISYHDLSETDPSGRRIHRHDPAKLAEALRLQL" FT misc_feature complement(1323583..1324509) FT /note="HMMPfam hit to PF01933, Uncharacterised protein FT family UPF0052" FT CDS complement(1324558..1325457) FT /transl_table=11 FT /locus_tag="DIP1313" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 32.9 kDa protein Rv1421 or MT1464 or MTCY21B4.39 FT SWALL:YE21_MYCTU (SWALL:P71690) (301 aa) fasta scores: E(): FT 9e-52, 47.82% id in 299 aa, and to Clostridium FT acetobutylicum predicted P-loop containing kinase, similar FT to B.subtilis YvcJ CAC0511 SWALL:AAK78491 (EMBL:AE007566) FT (294 aa) fasta scores: E(): 4.8e-43, 44.21% id in 285 aa" FT /protein_id="CAE49841.1" FT /translation="MNLNMRTDVEPRTEIPPVVITGLSGAGLSSAARVLEDMGWYVTQN FT IPSQFVVQLVELCADPHSPVDKIAIVSDVRSKEFSGSLEEVISELSGLGLKPLVVFMDA FT RNDVLIKRFDNLRRTHPLQGSGTLLVGIEREREIMNQIKESADVVIDTSDLSIHDLRRS FT IELNFNGIANKLQHVTVQSFGFKHGSPRDTDLLIDVRFLPNPFWVPELRPFRGTDKPVS FT DYVLADEGAQKFLDNFTRMLRDMRPGFKHEGKNFITVSVGCTGGHHRSVAIAEELARRL FT REVPDLDVSVNHRDIARN" FT CDS complement(1325463..1327526) FT /transl_table=11 FT /gene="uvrC" FT /locus_tag="DIP1314" FT /product="Putative excinuclease ABC subunit C" FT /note="Similar to Mycobacterium tuberculosis excinuclease FT ABC subunit C UvrC or Rv1420 or MT1463 or MTCY21B4.38 FT SWALL:UVRC_MYCTU (SWALL:P71689) (646 aa) fasta scores: E(): FT 1.1e-84, 60.17% id in 683 aa, and to Rickettsia prowazekii FT excinuclease ABC subunit C UvrC or RP572 SWALL:UVRC_RICPR FT (SWALL:Q9ZCX9) (626 aa) fasta scores: E(): 3.7e-30, 30.49% FT id in 682 aa" FT /protein_id="CAE49842.1" FT /translation="MSDPSTYRPAPGTIPTEPGVYKFRDPEGRVIYVGKAINLRSRLSN FT YFQDLSVLHPRTRQMVTTATSVEWTVVASEVEALQLEYTWIKKFDPHFNVKYRDDKTYP FT VLAVSVGERFPRAYFYRGPQRKGVRYYGPYSHAWAVRETLDLLTRVFPIRTCTKAVFNR FT HESLGRPCLLGYIDKCSAPCIGRVSESEHRIIVDGFCSFMAGNTDSVVRRLTNEMISAS FT EALDFEKAARKRDDLNAVRKITEQQAVVLGDGTDADVIAVAADDLEASIQLFHVRSGKI FT RGQRGWIVERTDNSESELEELLQSFLIRFYSDEVAHEDQVSDKELTVARRGVDKQSHES FT DLANRRINTSVVPKEVLVHKAPANVEQTTAVLRSLRHSNVDVRVPQRGDKRALADTVFA FT NAQEALRQHKIKRVSDLTTRSAALQEIHEALGLDEPPLRIECTDISHIQGTDVVASLVV FT FEDGLPKKSDYRRYKIKEAAGEGKSNDVGSIAEVVRRRFARYKNDCRMVPQEDEFDGSR FT FEDESLAGENTVAAKQRFAYSPQLFIVDGGAPQVAAAQDVLDELGITDVALIGIAKRLE FT EIWLPGEEDPLILPRNSQGLYLIQQLRDEAHRFAITFHRQQRSQRMRRSILDDIKGLGP FT ARRKVLVAHFGSVKELKKASESEIMMVNGIGPALAHSIYVALHPDSDDSSVQ" FT misc_feature complement(1325499..1325591) FT /note="ProfileScan hit to PS50120, Helix-hairpin-helix FT motif." FT misc_feature complement(1325694..1326794) FT /note="BlastProDom hit to PD005870, PD005870" FT misc_feature complement(1325853..1326752) FT /note="ProfileScan hit to PS50165, UvrC homology region 2." FT misc_feature complement(1326798..1326905) FT /note="HMMPfam hit to PF02151, UvrB/uvrC motif" FT /note="ProfileScan hit to PS50151, UvrB/uvrC motif." FT misc_feature complement(1327206..1327478) FT /note="HMMPfam hit to PF01541, Endo/excinuclease amino FT terminal domain" FT misc_feature complement(1327230..1327478) FT /note="HMMSmart hit to SM00465, GIY-YIG type nucleases (URI FT domain)" FT misc_feature complement(1327242..1327475) FT /note="ProfileScan hit to PS50164, UvrC homology region 1." FT CDS complement(1327536..1328096) FT /transl_table=11 FT /locus_tag="DIP1315" FT /product="Putative membrane protein" FT /note="Similar to Corynebacterium ammoniagenes RibX protein FT SWALL:O24754 (EMBL:AB003693) (184 aa) fasta scores: E(): FT 1.3e-34, 45.98% id in 187 aa, and to Mycobacterium leprae FT putative membrane protein ML0561 SWALL:Q9CCP2 FT (EMBL:AL583918) (156 aa) fasta scores: E(): 2.3e-15, 37.58% FT id in 141 aa" FT /protein_id="CAE49843.1" FT /translation="MTASSSNSNGDNPSTQRAIRLSDQEIQQYVALDAPLTTGKPWDLE FT INSAYLRRWAWSGAIFILAIHIFLAVVVAIGDTGTTVTLIDQWGYFLVGLVFASAFYLA FT FARPRVRANEDGVEVRNFVGTRFYPWSVIYGLNFPQGSKFARLELPEFEYVPLWAIQAG FT DGARSISAIEDFRILESQFMPED" FT misc_feature complement(order(1327782..1327838,1327869..1327934)) FT /note="2 probable transmembrane helices predicted for FT DIP1315 by TMHMM2.0" FT CDS complement(1328235..1328702) FT /transl_table=11 FT /gene="ribH" FT /locus_tag="DIP1316" FT /product="6,7-dimethyl-8-ribityllumazine synthase" FT /EC_number="2.5.1.9" FT /note="Similar to Corynebacterium ammoniagenes FT 6,7-dimethyl-8-ribityllumazine synthase RibH FT SWALL:RISB_CORAM (SWALL:O24753) (163 aa) fasta scores: E(): FT 4.6e-31, 55.84% id in 154 aa, and to Escherichia coli FT 6,7-dimethyl-8-ribityllumazine synthase RibH or RibE or FT B0415 or Z0516 or ECS0468 SWALL:RISB_ECOLI (SWALL:P25540) FT (156 aa) fasta scores: E(): 3.4e-12, 42.28% id in 149 aa" FT /protein_id="CAE49844.1" FT /translation="MSKEGLPNVSSVAGAGLVVGIVSATWNEKICNQLHAEAIRTAKDC FT GAKVIETRVIGALELPIVVQKLAQTCDAVVANGCVIKGGTPHFDYVCDSVTEGLTRIAL FT DSGVPVGNGVLTTLNEEQAIDRAGFDGSTENKGAEATIAAMHTALVLRDLP" FT misc_feature complement(1328241..1328663) FT /note="HMMPfam hit to PF00885, FT 6,7-dimethyl-8-ribityllumazine synthase" FT CDS complement(1328703..1329941) FT /transl_table=11 FT /gene="ribA" FT /locus_tag="DIP1317" FT /product="riboflavin biosynthesis protein RibA" FT /EC_number="3.5.4.25" FT /note="Similar to Corynebacterium ammoniagenes riboflavin FT biosynthesis protein [includes: GTP cyclohydrolase II; FT 3,4-dihydroxy-2-butanone 4-phosphate synthase] RibA FT SWALL:GCH2_CORAM (SWALL:O24752) (423 aa) fasta scores: E(): FT 7.4e-110, 68.87% id in 408 aa, and to Bacillus FT amyloliquefaciens riboflavin biosynthesis protein RibA FT SWALL:GCH2_BACAM (SWALL:P51695) (398 aa) fasta scores: E(): FT 1.2e-77, 52.77% id in 396 aa" FT /protein_id="CAE49845.1" FT /translation="MTLDSIERAIADIANGKPVVVVDSEDRENEGDLIFAADKATPELV FT AFMVRYSSGYICASLTSEECDRLQLPPMTSHNEDARGTAYAVTVDANTGTTGISATSRA FT DTLRKLADSQFGPQDFTRPGHVVPLRAKAGGVLERAGHTEAAVDLARMAGLNPAGVLCE FT VVSEDDPTDMARAPELRRFADRHDLALISIEQLIEWRRRYELLVERAVSTQLPTEFGRF FT TAVGYRGIVDGVEHIALVAGDITSDEGKDVLLRVHSECLTGDVLGSRRCDCGPQLQASL FT RAISERGRGVVVYLRGHEGRGIGLLHKLQAYHLQDEGADTVDANKALGLPVDARNYSVA FT AHILRDLGVQSVCLLTNNPEKSLELERYGVKVTGREPVKVEVHEDNIRYLTTKRDRMNH FT DLPWIAEYKKEQS" FT misc_feature complement(1328808..1329329) FT /note="HMMPfam hit to PF00925, GTP cyclohydrolase II" FT misc_feature complement(1329336..1329926) FT /note="HMMPfam hit to PF00926, 3,4-dihydroxy-2-butanone FT 4-phosphate synthase" FT misc_feature complement(1329339..1329926) FT /note="BlastProDom hit to PD003034, PD003034" FT CDS complement(1330056..1330664) FT /transl_table=11 FT /gene="ribE" FT /gene_synonym="ribB" FT /locus_tag="DIP1318" FT /product="riboflavin synthase alpha chain" FT /EC_number="2.5.1.9" FT /note="Similar to Actinobacillus pleuropneumoniae FT riboflavin synthase alpha chain RibE or RibB FT SWALL:RISA_ACTPL (SWALL:P50854) (215 aa) fasta scores: E(): FT 7.6e-32, 49% id in 200 aa, and to Mycobacterium FT tuberculosis riboflavin synthase alpha chain RibE or RibC FT or Rv1412 or MT1456 or MTCY21B4.29 SWALL:RISA_MYCTU FT (SWALL:P71680) (201 aa) fasta scores: E(): 8.6e-39, 58.29% FT id in 199 aa, and to Bacillus subtilis riboflavin synthase FT alpha chain RibE or RibB SWALL:RISA_BACSU (SWALL:P16440) FT (215 aa) fasta scores: E(): 1.2e-25, 43.06% id in 202 aa" FT /protein_id="CAE49846.1" FT /translation="MFTGLIEEIGTITGMEEQGDSLVLSISAPALMVDVKQGDSISVNG FT VCLTVVICDATGFTADVMRESLDRSSLGQLRTGSYVNLERAMRADARMGGHIVQGHVDG FT TGVLLSRDHSEHWDVLRFSLPADISQYVVEKGSIAVDGTSLTVSSISEPLAENHWFEVS FT LIPTTLEHTTLGELKLREVVNLEVDIVGKYVERMLAGHK" FT misc_feature complement(1330071..1330595) FT /note="BlastProDom hit to PD004110, PD004110" FT misc_feature complement(1330101..1330370) FT /note="HMMPfam hit to PF00677, Lumazine binding domain" FT misc_feature complement(1330407..1330658) FT /note="HMMPfam hit to PF00677, Lumazine binding domain" FT misc_feature complement(1330413..1330451) FT /note="ScanRegExp hit to PS00693, Riboflavin synthase alpha FT chain family signature." FT CDS complement(1330722..1331726) FT /transl_table=11 FT /gene="ribD" FT /gene_synonym="ribG" FT /locus_tag="DIP1319" FT /product="Putative riboflavin biosynthesis protein" FT /note="Similar to Corynebacterium ammoniagenes riboflavin FT biosynthesis protein [includes: riboflavin-specific FT deaminase and uracil reductase] RibD or RibG FT SWALL:RIBD_CORAM (SWALL:O24750) (337 aa) fasta scores: E(): FT 4.7e-50, 46.89% id in 322 aa, and to Bacillus subtilis FT riboflavin biosynthesis protein RibD or RibG FT SWALL:RIBD_BACSU (SWALL:P17618) (361 aa) fasta scores: E(): FT 2.8e-22, 34.76% id in 325 aa" FT /protein_id="CAE49847.1" FT /translation="MNFIYPAVIAAVQEGEKAWGTTHPNPPVGAVVLSSNGSIVGRGHT FT QPPGGSHAEIMALRQAGENTKGGTLVVTLEPCNHWGRTGPCSHAISESGIEHVVYLMQD FT TGSLEKGGAEYLRRQGLKVTFLGLSVAALIPWQASKDRGWPYVVGKTAHTLDGFVAAED FT HSSKWITGSASRDYANRQRRHFDAIIVGTGTVKADNPALTARKDDGTLLPHQPLKVVIG FT TSKISEGTQLARSGFVQFSTIEEALVQLWDRGVRYVLVEGGPHLLHGFLTSGNLDQLHS FT YSAPMLLTRGVSLLQEEEKKSAESANTTIASALRGSPQSISMLGDDILQVINI" FT misc_feature complement(1330791..1331291) FT /note="HMMPfam hit to PF01872, RibD C-terminal domain" FT misc_feature complement(1331421..1331726) FT /note="HMMPfam hit to PF00383, Cytidine and deoxycytidylate FT deaminase zinc-binding region" FT misc_feature complement(1331457..1331573) FT /note="ScanRegExp hit to PS00903, Cytidine and FT deoxycytidylate deaminases zinc-binding region signature." FT CDS complement(1331821..1332495) FT /transl_table=11 FT /gene="rpe" FT /locus_tag="DIP1320" FT /product="ribulose-phosphate 3-epimerase" FT /EC_number="5.1.3.1" FT /note="Similar to Mycobacterium tuberculosis FT ribulose-phosphate 3-epimerase Rpe or Rv1408 or MT1452 or FT MTCY21B4.25 SWALL:RPE_MYCTU (SWALL:P71676) (229 aa) fasta FT scores: E(): 2e-49, 58.63% id in 220 aa, and to Escherichia FT coli ribulose-phosphate 3-epimerase Rpe or Dod or B3386 or FT Z4739 or ECS4228 SWALL:RPE_ECOLI (SWALL:P32661) (225 aa) FT fasta scores: E(): 1.3e-30, 43.19% id in 213 aa" FT /protein_id="CAE49848.1" FT /translation="MTQTRQCPIIAPSILAADFRKLEEEIQSVNHADWIHVDVMDGHFV FT PNLSFGADITCAARLSTSQPLDVHLMIENPENWVDSYIKAGAFTVIFHVEATDNPVDLA FT RHIREQGARAGFSLKPSTPIDPYLDMLEEFDEVLIMSVEPGFGGQKFMPEQLEKVRQLR FT RIIDERNLDVTIEIDGGISESTIRQAAEAGCDAFVAGSAVFGSDDRNAAIDALRERARS FT RA" FT misc_feature complement(1331875..1332471) FT /note="HMMPfam hit to PF00834, Ribulose-phosphate 3 FT epimerase family" FT misc_feature complement(1332019..1332087) FT /note="ScanRegExp hit to PS01086, Ribulose-phosphate FT 3-epimerase family signature 2." FT misc_feature complement(1332349..1332393) FT /note="ScanRegExp hit to PS01085, Ribulose-phosphate FT 3-epimerase family signature 1." FT CDS complement(1332549..1334006) FT /transl_table=11 FT /locus_tag="DIP1321" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 48.5 kDa protein Rv1407 or MT1451 or MTCY21B4.24 FT SWALL:YE07_MYCTU (SWALL:P71675) (457 aa) fasta scores: E(): FT 6.2e-86, 55.4% id in 453 aa, and to Escherichia coli Sun FT protein Sun or Fmu or Fmv or RsmB or B3289 SWALL:SUN_ECOLI FT (SWALL:P36929) (429 aa) fasta scores: E(): 1.2e-31, 33.63% FT id in 449 aa" FT /protein_id="CAE49849.1" FT /translation="MSGGFRSRSRSGDHLPVRSEKKQSTNRSRQPKRSSQSDPRWKPLR FT GIDLPRSVAFWVIQRVEIDAAYANLTLPKVLKQSKLSGRDAAFATELTYGTLRTQGVLD FT TVIAECSSRELEALKPEVRAALRLGAYQLLYTRVGAHAAVDTTVRIMEAIGQDRAKGFV FT NGVLRTISRTSPQSWIEKLTPSGEVESIAFQHAHPAWIARSFSQIVGMNELEAALSADS FT ERPKVHLVARPGEMSAEELALIVGGDEGKYSPYAVYLESGDPGALEPVREGLAAVQDEG FT SQLIARAVTEAPIHGEDQGKWLDLCAGPGGKAALLGAIARIDGATVDAVEVSKHRAKLI FT ENIVRGLPVKVTVGDGRSPGLAPGYDRVLVDAPCSGLGALRRRPEARWRKQETDIEELT FT KLQSQLLESALRLVRTGGIVVYSTCSPDLRETRQIVDRILRSHEVEELNAAELVPSMEN FT TGEYKSVHMWPHRHGTDAMFFAVLRKK" FT misc_feature complement(1332558..1333376) FT /note="HMMPfam hit to PF01189, NOL1/NOP2/sun family" FT misc_feature complement(1333485..1333865) FT /note="HMMPfam hit to PF01029, NusB family" FT misc_feature complement(1333494..1333874) FT /note="BlastProDom hit to PD005242, PD005242" FT CDS complement(1334003..1334938) FT /transl_table=11 FT /gene="fmt" FT /locus_tag="DIP1322" FT /product="methionyl-tRNA formyltransferase" FT /EC_number="2.1.2.9" FT /note="Similar to Mycobacterium tuberculosis methionyl-tRNA FT formyltransferase Fmt or Rv1406 or MT1450 or MTCY21B4.23 FT SWALL:FMT_MYCTU (SWALL:P71674) (312 aa) fasta scores: E(): FT 4.5e-58, 55.37% id in 307 aa, and to Escherichia coli FT methionyl-tRNA formyltransferase Fmt or B3288 FT SWALL:FMT_ECOLI (SWALL:P23882) (314 aa) fasta scores: E(): FT 6e-35, 41% id in 300 aa" FT /protein_id="CAE49850.1" FT /translation="MRLIFAGTPEPAVVVLSRLLESEHEVVAVLTRPDARRGRGRTLHP FT SPVSELAQQHGIEVLTPATIKPNTPDGDAFRARLTELAPDCVPVVAYGNLITEDLLQAV FT PHGWINLHFSLLPRWRGAAPVQAAIAAGDTSTGATTFRIDKGLDTGQILGVIHEPIQST FT DTADDLLTRLAYSGADLLVNTMDNLAQGIATYSEQIGTATYAPKITTEDARIQWTHPAE FT AVDKHIRAVTPGPGAWSLLGDQRFKIGPVSVAEESDLQPGHMRIEKNRVLVGTGDLNIE FT LDQIQPQGKKRMKASDWARGLQNTEGLVLS" FT misc_feature complement(1334030..1334317) FT /note="HMMPfam hit to PF02911, Formyl transferase, FT C-terminal domain" FT misc_feature complement(1334384..1334938) FT /note="HMMPfam hit to PF00551, Formyl transferase" FT CDS complement(1334975..1335484) FT /transl_table=11 FT /locus_tag="DIP1323" FT /product="Putative peptide deformylase" FT /note="Similar to, although shorter than Streptomyces FT coelicolor peptide deformylase Def or SC10A7.23 FT SW:DEF_STRCO (Q9XAQ2) (208 aa) fasta scores: E(): 2.3e-19, FT 40.46% id in 173 aa, and similar to Clostridium FT acetobutylicum peptide deformylase Def or CAC1722 FT SW:DEF_CLOAB (O05100) (150 aa) fasta scores: E(): 1.9e-17, FT 46.66% id in 150 aa" FT /protein_id="CAE49851.1" FT /translation="MAIRDIRLFGDPVLTTKSSDVEVFDSSIRNLVNDMLETMDAAGGV FT GLAANQVGVTKRVFVYDCSHIEDGLRGHIINPVWEPIGEDIQIGPEGCLSIPDVQEETE FT RWMTVSVSGRDVDGNPISLVASGLMARCIQHETDHLDGVLFLRKLDKVHRKDAMAQIRK FT SEWFNQ" FT misc_feature complement(1335008..1335481) FT /note="HMMPfam hit to PF01327, Polypeptide deformylase" FT misc_feature complement(1335050..1335469) FT /note="BlastProDom hit to PD003844, PD003844" FT CDS complement(1335564..1337591) FT /transl_table=11 FT /locus_tag="DIP1324" FT /product="Putative primosomal protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 62.4 kDa protein TR:Q9K5E3 (EMBL:AJ290443) (576 aa) fasta FT scores: E(): 2.7e-128, 60.41% id in 576 aa, and to FT Mycobacterium tuberculosis putative primosomal protein N' FT PriA or Rv1402 or MT1446 or MTCY21B4.19 SW:PRIA_MYCTU FT (P71670) (655 aa) fasta scores: E(): 1.3e-119, 48.12% id in FT 665 aa, and to Escherichia coli primosomal protein N' PriA FT or B3935 SW:PRIA_ECOLI (P17888) (732 aa) fasta scores: E(): FT 2.3e-09, 25.82% id in 573 aa" FT /protein_id="CAE49852.1" FT /translation="MSKTRVAASSLPVARVLPLLGVAHLDRVFEYLVDSTMSDDAQPGV FT KVRVRFGGRLVDGIILERTSGQEHEGRLAWLDKVQSSVPVYTPALRRLIESLSTRYAGI FT TSDVIRSAIPSRHAKVEEGDFSTSWDDLGDVDEPDLSMWAKYVHGKSFVDAVIACQTAR FT AAWQIAPGENWAAAIAALGTKVAIAGGGVLIVVPDQRDVETLEAAFRGLVSARQITVMT FT SAQGPQARYRRFLSILHGQGRIVVGTRSAAFAPVVNLQLAVIKDDGDENLVDPRSPYIH FT AREVLSTRSTQEHCSLILAGHSRSTEAQLLVQSGWAHNLVVDRERVRKMMPRIHAVADT FT NTALERDPLARAARIPSAAFSSLRDALKRNRPVLIHVPRKGYIPVLACQQCRSAARCRY FT CNGPLELPFPESGAPQTPQCRWCGRPDSHFRCTHCGSSNLRAIVLGAERTAEEIGRAFP FT QTRVVVSGGNRVHDTIPDAPIVVVATPGAEPEIADDGRYGAAVLLDTWALLSRQDLRAS FT EDTLAKWFSVCTLVEPCVVGGEVVVVADAGLFEVQALIRWDPIWAASRELELRQEVHFP FT PAAHMAAIDGARDAIDEFLDMIQLPDHAEILGPVSLPAGNKLPGEYDENTYGPPQRVLI FT RIPLKDRNELGEVLRSGIVQRSAKRKELPLRVKIDPIHVG" FT misc_feature complement(1337139..1337162) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1337610..1338842) FT /transl_table=11 FT /gene="metK" FT /locus_tag="DIP1325" FT /product="S-adenosylmethionine synthetase" FT /EC_number="2.5.1.6" FT /note="Similar to Corynebacterium glutamicum FT S-adenosylmethionine synthetase MetK TR:Q9K5E4 FT (EMBL:AJ290443) (407 aa) fasta scores: E(): 1.7e-121, FT 79.15% id in 403 aa, and to Escherichia coli FT S-adenosylmethionine synthetase MetK or MetX or B2942 or FT Z4287 or ECS3818 SW:METK_ECOLI (P04384) (384 aa) fasta FT scores: E(): 1.1e-57, 56.89% id in 399 aa" FT /protein_id="CAE49853.1" FT /translation="MSETAASGLRLFTSESVTEGHPDKICDAISDTILDALLSVDPHAR FT VAVETVTTTGLVHVVGEVRTSGYVEIPKLVRDKLIEIGFNSSEVGFDGRTCGVSVSIGE FT QSQEIGAGVDQSHEVRSGENTDADDQAGAGDQGLMFGYATNETATLMPLPIDLAHRLAR FT RLTQVRKTSVVSHLRPDGKTQVTLAYDESGRPVRLDTVVVSTQHDPDVTQEWLFAQIKE FT HVVDWVLRDSGLESTLDISGYSLLVNPSGSFVVGGPMGDAGLTGRKIIVDTYGGMARHG FT GGAFSGKDPSKVDRSGAYAMRWVAKNIVAAGLADRAEVQVAYAIGRAKPVGLYVETFGT FT AKFGLTDEQIQDAVLHVFDLRPAAIIRELDLLRPIYAGTAAYGHFGRDDLKLPWENTDR FT AEQLRDVLSLG" FT misc_feature complement(1337619..1338080) FT /note="HMMPfam hit to PF02773, S-adenosylmethionine FT synthetase, C-terminal domain" FT misc_feature complement(1337976..1338002) FT /note="ScanRegExp hit to PS00377, S-adenosylmethionine FT synthetase signature 2." FT misc_feature complement(1338156..1338458) FT /note="HMMPfam hit to PF02772, S-adenosylmethionine FT synthetase, central domain" FT misc_feature complement(1338417..1338449) FT /note="ScanRegExp hit to PS00376, S-adenosylmethionine FT synthetase signature 1." FT misc_feature complement(1338519..1338821) FT /note="HMMPfam hit to PF00438, S-adenosylmethionine FT synthetase, N-terminal domain" FT CDS complement(1338983..1340227) FT /transl_table=11 FT /gene="dfp" FT /locus_tag="DIP1326" FT /product="DNA/pantothenate metabolism flavoprotein homolog" FT /note="Similar to Mycobacterium tuberculosis FT DNA/pantothenate metabolism flavoprotein homolog Dfp or FT Rv1391 or MT1436 or MTCY21B4.08 SW:DFP_MYCTU (P71661) (418 FT aa) fasta scores: E(): 6.3e-77, 54.32% id in 405 aa, and to FT Escherichia coli DNA/pantothenate metabolism flavoprotein FT Dfp or B3639 SW:DFP_ECOLI (P24285) (406 aa) fasta scores: FT E(): 1.5e-43, 40.26% id in 385 aa" FT /protein_id="CAE49854.1" FT /translation="MTNTSFDNSTIVVGVAGGIAAYKSCHVVRGFKEDGANVVVVPTSA FT ALNFVGKATFEALSGNPVSTTVFDAVDEVRHVNVGQHADLIVVAPATADLIARVAMGRA FT DDLLTATLLVATCPIVLVPAMHAEMWSNAATRENVATLRRRGIIVMDPAHGRLTGADTG FT PGRLPDSDQIIDFAKTVARTKVMPRDLVGKKVLISAGGTQENIDPVRYVGNRSSGRQGF FT ALAEIASQRGAEVTVVAGATDKLPVPCGARVVNVTSAVEMQRECMREARNSDVVIMAAA FT VADFRPREIASAKMKKGTADSSLQVISMVENPDILRGLVEQRQGEKPVIVGFAAETGDA FT NHTPLEFARQKLNRKKCDLLMCNEVGVDKVFGKADNSGYLLSRQGNVEEISQGSKHWIA FT FNILNHVVRLLEAEM" FT misc_feature complement(1339856..1340203) FT /note="HMMPfam hit to PF02441, Flavoprotein" FT CDS complement(1340329..1340607) FT /transl_table=11 FT /gene="rpoZ" FT /locus_tag="DIP1327" FT /product="Putative DNA-directed RNA polymerase omega chain" FT /EC_number="2.7.7.6" FT /note="Similar to Mycobacterium leprae probable FT DNA-directed RNA polymerase omega chain RpoZ or ML0542 FT SWALL:RPOZ_MYCLE (SWALL:Q9CCQ6) (110 aa) fasta scores: E(): FT 7e-22, 74.69% id in 83 aa, and to Streptomyces coelicolor FT probable DNA-directed RNA polymerase omega chain RpoZ or FT SC9C5.02c SWALL:RPOZ_STRCO (SWALL:Q9KXS1) (90 aa) fasta FT scores: E(): 3.6e-17, 67.53% id in 77 aa" FT /protein_id="CAE49855.1" FT /translation="MSNVAENNDGVYDAPTGITAPPIDELLKHVSSKYALVIFAAKRAR FT QINSYYQQADEGVFEFVGPLVTPEAQEKPLSIAMREIEAGLLDHEEG" FT CDS complement(1340681..1341256) FT /transl_table=11 FT /gene="gmk" FT /locus_tag="DIP1328" FT /product="guanylate kinase" FT /EC_number="2.7.4.8" FT /note="Similar to Mycobacterium tuberculosis guanylate FT kinase Gmk or Rv1389 or MT1434 or MTCY21B4.06 FT SWALL:KGUA_MYCTU (SWALL:P71659) (208 aa) fasta scores: E(): FT 1.2e-38, 64.48% id in 183 aa, and to Saccharomyces FT cerevisiae guanylate kinase Guk1 or YDR454c or D9461.39 FT SWALL:KGUA_YEAST (SWALL:P15454) (186 aa) fasta scores: E(): FT 1.7e-19, 39.89% id in 188 aa" FT /protein_id="CAE49856.1" FT /translation="MSGDNPVGRLVVLAGPSAVGKSTVVHRLREEIEDLYFSVSMTTRA FT PRPGERDGVDYFFVSPEEFQSKIDAGEMLEWADIHGGLQRSGTPAGPVEAALLAGRPVL FT VEVDLVGARNVASLKPESETVFLAPPSWEVLVERLTGRGTEPEDVITRRLETAKNELTA FT QHEFKHVVVNEDVEKAVSDIKEILVGRR" FT misc_feature complement(1340684..1341238) FT /note="HMMSmart hit to SM00072, Guanylate kinase FT homologues." FT misc_feature complement(1340693..1341235) FT /note="ProfileScan hit to PS50052, Guanylate kinase domain FT profile." FT misc_feature complement(1340810..1341130) FT /note="HMMPfam hit to PF00625, Guanylate kinase" FT misc_feature complement(1341080..1341133) FT /note="ScanRegExp hit to PS00856, Guanylate kinase FT signature." FT misc_feature complement(1341191..1341214) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1341260..1341583) FT /transl_table=11 FT /gene="mihF" FT /locus_tag="DIP1329" FT /product="integration host factor" FT /note="Similar to Mycobacterium smegmatis integration host FT factor MihF SWALL:P96802 (EMBL:U75344) (105 aa) fasta FT scores: E(): 7.1e-21, 72.38% id in 105 aa, and to FT Mycobacterium tuberculosis hypothetical 20.8 kDa protein FT CY21B4.05 Rv1388 or MT1433 or MTCY21B4.05 SWALL:AAK45698 FT (EMBL:Z80108) (111 aa) fasta scores: E(): 3.8e-21, 74.75% FT id in 103 aa" FT /protein_id="CAE49857.1" FT /translation="MALPKLTDEQRKEALAKAAEARKARAELKEQLKRSDITLKEVLDK FT ASSDEIIGKTKVSALLESLPKVGKVKAKEIMEELEIAQTRRLRGLGDRQRRALLERFGY FT SED" FT CDS complement(1341932..1342780) FT /transl_table=11 FT /gene="pyrF" FT /locus_tag="DIP1330" FT /product="orotidine 5'-phosphate decarboxylase" FT /EC_number="4.1.1.23" FT /note="Similar to Mycobacterium leprae orotidine FT 5'-phosphate decarboxylase PyrF or ML0537 SWALL:Q9CCR1 FT (EMBL:AL583918) (282 aa) fasta scores: E(): 7.5e-48, 53.13% FT id in 271 aa, and to Streptomyces coelicolor orotidine FT 5'-phosphate decarboxylase PyrF or SC9C5.05c SWALL:Q9KXR8 FT (EMBL:AL357523) (278 aa) fasta scores: E(): 2.9e-44, 48.14% FT id in 270 aa" FT /protein_id="CAE49858.1" FT /translation="MIQERKNLVTFGDQLVEAGRRLGRLCVGIDPHPSLLKQWGCDDGI FT AGLQRFTEICVEAFSGNVALVKPQVAFYEAWGAAGYQILESAISELRQAGTLVLSDAKR FT GDIGSTMAGYAQAWLAEESSLSSDAVTVSPFLGYGSLSPVLEVAASTNKGVFVLAATSN FT PEARSLQDRIGEDGLSISQLMVDSVALSNREHKENNHYGNVGVVIGATLAHPPQLERLN FT GPILLPGVGAQGATPADVARLTQGVQELAFANVSRGILKAGPSASALSTAISKFVEEFT FT N" FT misc_feature complement(1342292..1342642) FT /note="HMMPfam hit to PF00215, Orotidine 5'-phosphate FT decarboxylase" FT misc_feature complement(1342448..1342489) FT /note="ScanRegExp hit to PS00156, Orotidine 5'-phosphate FT decarboxylase active site." FT CDS complement(1342777..1346133) FT /transl_table=11 FT /gene="carB" FT /gene_synonym="pyrA" FT /locus_tag="DIP1331" FT /product="carbamoyl-phosphate synthase large chain" FT /EC_number="6.3.5.5" FT /note="Similar to Mycobacterium tuberculosis FT carbamoyl-phosphate synthase large chain CarB or Rv1384 or FT MT1428 or MTCY02B12.18 or MTCY21B4.01 SWALL:CARB_MYCTU FT (SWALL:P57689) (1115 aa) fasta scores: E(): 0, 72.85% id in FT 1120 aa, and to Escherichia coli carbamoyl-phosphate FT synthase large chain CarB or PyrA or B0033 SWALL:CARB_ECOLI FT (SWALL:P00968) (1072 aa) fasta scores: E(): 2.6e-137, FT 52.36% id in 1121 aa" FT /protein_id="CAE49859.1" FT /translation="MPKRNDIKHVLVIGSGPIVIGQACEFDYSGTQACRVLKEEGLRVT FT LINSNPATIMTDPEFADHTYVEPIEPEYIEKIFEKEIAEGHPVDAVLATLGGQTALNAA FT IKLDRRGSLEKYNVELIGADIDAIERGEDRQKFKDIVAKIGGESARSRVCHNMQEVYDT FT VEELGLPVVVRPSFTMGGLGSGLAFNQEDLERIAGGGLAASPEANVLIEESILGWKEYE FT LELMRDGADNVVVICSIENVDALGVHTGDSVTVAPALTLTDREYQKMRNQGIAIIREVG FT VDTGGCNIQFAVNPRDGRLITIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDEI FT TNDITGVTPAAFEPTLDYVVVKSPRFAFEKFTGSDDTLTTTMKSVGEAMALGRNYIAAL FT GKVMRSLENKQVGFWTTSDEFFAGDRAKNLDAVLEDLKRPTEGRMYDVELALRLGGSIE FT EVHQASGLDPWFLAELQSLIDFRESLMKAPVLDEPLLRKAKFFGLSDRQIAALRPEFAG FT EDGVRRLRWSLGVRPVFKTVDTCAAEFEATTPYHYSAYELDPAAESEVRPQTEKDKIII FT LGSGPNRIGQGIEFDYSCVHAALELSRVGYETVMVNCNPETVSTDYDTADRLYFEPLTF FT EDVMEVYHAESESGHVAGVIVQLGGQTPLGLAEKLRDAGVPVIGTTPEAIDLAEDRGEF FT GEVLRKAQLPAPAFGTATSFEEAKTVANNIGYPVLVRPSYVLGGRGMEIVYDENSLHAY FT IERATEITSDHPVLVDRFLDNAIEIDVDALCDGENVYLAGVMEHIEEAGIHSGDSACAL FT PPMTLGAEDIENVRRSTEALAHGIGVKGLMNVQYALKDDILYVIEANPRASRTVPFVSK FT ATGVHLAKAAARIMTGATIPELQAEGMIPTGYDGGSLPENSPIAVKEAVLPFNRFRRPD FT GTMLDTLLSPEMKSTGEVMGLADNFGAAYAKAEQAAFGALPTEGTVFVSVANRDKRTLI FT FPIQRLASLGFRVLATSGTAGMLRRNGIECEVVLKQTQVQEARQNGTEGQRSVVDMIKA FT GEVDLILNTPAGSSGARHDGYQIRAAAVNVGVPLVTTVQGVTAAVQGIEALRAGELSVR FT ALQELDHSVTR" FT misc_feature complement(1342882..1343208) FT /note="HMMPfam hit to PF02142, MGS-like domain" FT misc_feature complement(1343440..1344066) FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain, ATP binding domain" FT misc_feature complement(1343548..1343571) FT /note="ScanRegExp hit to PS00867, Carbamoyl-phosphate FT synthase subdomain signature 2." FT misc_feature complement(1343914..1343958) FT /note="ScanRegExp hit to PS00866, Carbamoyl-phosphate FT synthase subdomain signature 1." FT misc_feature complement(1344070..1344426) FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain, N-terminal domain" FT misc_feature complement(1344469..1344840) FT /note="HMMPfam hit to PF02787, Carbamoyl-phosphate FT synthetase large chain, oligomerisation domain" FT misc_feature complement(1344928..1344984) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(1345030..1345737) FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain, ATP binding domain" FT misc_feature complement(1345141..1345230) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(1345351..1345404) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(1345450..1345509) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(1345579..1345617) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(1345741..1346118) FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain, N-terminal domain" FT misc_feature complement(1345960..1345992) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT misc_feature complement(1346035..1346079) FT /note="FPrintScan hit to PR00098, Carbamoyl-phosphate FT synthase protein CPSase domain signature" FT CDS complement(1346154..1347293) FT /transl_table=11 FT /gene="carA" FT /locus_tag="DIP1332" FT /product="carbamoyl-phosphate synthase small chain" FT /EC_number="6.3.5.5" FT /note="Similar to Mycobacterium tuberculosis FT carbamoyl-phosphate synthase small chain CarA or Rv1383 or FT MT1427 or MTCY02B12.17 SWALL:CARA_MYCTU (SWALL:P71811) (376 FT aa) fasta scores: E(): 5.1e-98, 68.46% id in 371 aa, and to FT Escherichia coli carbamoyl-phosphate synthase small chain FT CarA or PyrA or B0032 or Z0037 or ECS0035 SWALL:CARA_ECOLI FT (SWALL:P00907) (382 aa) fasta scores: E(): 7.5e-31, 45.61% FT id in 388 aa" FT /protein_id="CAE49860.1" FT /translation="MTSQDRSEAVLVLADGRIFKGESFGAEGATLGEAVFTTAMSGYQE FT TMTDPSYHRQIVVATAPQIGNTGWNDEDGESHGDKIWVAGLVIRDLSTAVSNWRAKRSL FT EDEMREQNIVGISGVDTRAIVRHLRNFGSVAAGIFSGEAAKQPHDELIEIVKSQPSMAG FT ADLASEVSTQEAYVVEPDGEALYTVVAYDMGIKTNTPRNFSRRGIRTVVVPANTPAEDI FT AQYNPDGVFVSNGPGDPATADVMVGIVQEILAQKIPFFGICFGNQILGRALGMNTYKMK FT FGHRGINVPVLNHLTGKIDITAQNHGFALEGTALEQFDTPFGPAHVTHTCLNDDTVEGV FT ALVNGLAYSVQYHPEAAAGPHDANPLFDQFVELIQANKK" FT misc_feature complement(1346175..1346729) FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I" FT misc_feature complement(1346208..1346249) FT /note="FPrintScan hit to PR00096, Glutamine FT amidotransferase superfamily signature" FT /note="FPrintScan hit to PR00097, Anthranilate synthase FT component II signature" FT misc_feature complement(1346361..1346396) FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature complement(1346418..1346471) FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature complement(1346472..1346522) FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature complement(1346487..1346522) FT /note="FPrintScan hit to PR00096, Glutamine FT amidotransferase superfamily signature" FT /note="FPrintScan hit to PR00097, Anthranilate synthase FT component II signature" FT /note="ScanRegExp hit to PS00442, Glutamine FT amidotransferases class-I active site." FT misc_feature complement(1346571..1346615) FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature complement(1346577..1346606) FT /note="FPrintScan hit to PR00096, Glutamine FT amidotransferase superfamily signature" FT /note="FPrintScan hit to PR00097, Anthranilate synthase FT component II signature" FT misc_feature complement(1346688..1346732) FT /note="FPrintScan hit to PR00099, Carbamoyl-phosphate FT synthase protein GATase domain signature" FT misc_feature complement(1346817..1347275) FT /note="HMMPfam hit to PF00988, Carbamoyl-phosphate synthase FT small chain, CPSase domain" FT RBS complement(1347301..1347306) FT CDS complement(1347449..1348795) FT /transl_table=11 FT /gene="pyrC" FT /locus_tag="DIP1333" FT /product="dihydroorotase" FT /EC_number="3.5.2.3" FT /note="Similar to (although longer in its N-terminal FT region) Mycobacterium tuberculosis dihydroorotase PyrC or FT Rv1381 or MT1425 or MTCY02B12.15 SWALL:PYRC_MYCTU FT (SWALL:P71809) (430 aa) fasta scores: E(): 3.2e-110, 63.38% FT id in 426 aa, and to Bacillus subtilis dihydroorotase PyrC FT SWALL:PYRC_BACSU (SWALL:P25995) (428 aa) fasta scores: E(): FT 6.4e-43, 36.34% id in 432 aa. Note: Possible alternative FT start codon at residue 25" FT /protein_id="CAE49861.1" FT /translation="MSTQNYPATGRLAEPEYGTLLVKNVKIYGEGEPVNVLITDGVITD FT THAGDVKADREVDGQGGVLLPGLVDIHVHLREPGREDTETIATGSAAAAKGGFTAVFTM FT ANTMPVMDQPIIAESVWHKGQDIGLCDVHPVGSITKGLEGKEITEFGMMAHSQAKVRMF FT SDDGKCVDNPLIMRRAVEYARGTDVLLAQHCEDPRLTDGAVAHEGAMAAKLGLGGWPRV FT AEESIVARDAILARDYGGRMHICHASTQGTVELVKWAKEHEIPLTAEVTPHHLLLTDER FT LATYDGVNRVNPPLRENSDILALRDALLNGTIDCVATDHAPHGSEDKCCEFEHAKPGML FT GLETSLAVVAAVFVETGLADWRFVAKVMSERPAEIVKLPGHGRPIAVGEPANLTIVDPG FT AKWTASGEKMASKATNTPYEGMEFNARVTTTILRGRLTCVDGEPTQARA" FT misc_feature complement(1347485..1348633) FT /note="HMMPfam hit to PF00744, Dihydroorotase-like" FT misc_feature complement(1347812..1347847) FT /note="ScanRegExp hit to PS00483, Dihydroorotase signature FT 2." FT misc_feature complement(1348562..1348588) FT /note="ScanRegExp hit to PS00482, Dihydroorotase signature FT 1." FT CDS complement(1348820..1349761) FT /transl_table=11 FT /gene="pyrB" FT /locus_tag="DIP1334" FT /product="aspartate carbamoyltransferase" FT /EC_number="2.1.3.2" FT /note="Similar to Mycobacterium leprae aspartate FT carbamoyltransferase PyrB or ML0532 SWALL:PYRB_MYCLE FT (SWALL:Q9CCR5) (321 aa) fasta scores: E(): 5.4e-79, 66.98% FT id in 312 aa, and to Bacillus subtilis aspartate FT carbamoyltransferase PyrB SWALL:PYRB_BACSU (SWALL:P05654) FT (304 aa) fasta scores: E(): 3.2e-32, 39.53% id in 301 aa" FT /protein_id="CAE49862.1" FT /translation="MKHLLSIADLSKDDIIGLMDEADRFREALLGRDIKKLPTLRGRTI FT FTLFYENSTRTRSSFETAGKWMSADVINISAGSSSVKKGESLKDTGLTLSAIGADAIVM FT RHYSSGAAEQLARWVAPGGVGPSVINAGDGAHQHPTQALLDAVTIRQRLGDIDGRKVVI FT VGDCLHSRVVRSNVDLLTTLGAEVVLVGPPTLLPAGIDTWPVRYSYDMDAEIYDADVVM FT MLRVQQERMHGGFFPTHREYATLYGLSAERERKLQDHTIVMHPGPMLRGMEINFGVADA FT PRTAVLQQVSNGVHTRMAVLFTLIAGQDAAAF" FT misc_feature complement(1348862..1348906) FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature complement(1348877..1348912) FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature complement(1348883..1348954) FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature complement(1348961..1348978) FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature complement(1348961..1348990) FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature complement(1349072..1349101) FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature complement(1349300..1349353) FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature complement(1349303..1349758) FT /note="HMMPfam hit to PF02729, Aspartate/ornithine FT carbamoyltransferase, carbamoyl-P binding domain" FT misc_feature complement(1349315..1349350) FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature complement(1349483..1349524) FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature complement(1349504..1349533) FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature complement(1349558..1349617) FT /note="FPrintScan hit to PR00100, Aspartate/ornithine FT carbamoyltransferase superfamily signature" FT misc_feature complement(1349579..1349623) FT /note="FPrintScan hit to PR00102, Ornithine FT carbamoyltransferase signature" FT misc_feature complement(1349579..1349647) FT /note="FPrintScan hit to PR00101, Aspartate FT carbamoyltransferase signature" FT misc_feature complement(1349594..1349617) FT /note="ScanRegExp hit to PS00097, Aspartate and ornithine FT carbamoyltransferases signature." FT CDS complement(1349761..1350333) FT /transl_table=11 FT /gene="pyrR" FT /locus_tag="DIP1335" FT /product="pyrimidine operon regulatory protein" FT /note="Similar to Streptomyces coelicolor pyrimidine operon FT regulatory protein PyrR SWALL:Q9KXR1 (EMBL:AL357523) (193 FT aa) fasta scores: E(): 7.5e-34, 61.9% id in 168 aa, and to FT Bacillus subtilis pyrimidine operon regulatory protein PyrR FT SWALL:PYRR_BACSU (SWALL:P39765) (181 aa) fasta scores: E(): FT 3.1e-26, 48.29% id in 176 aa" FT /protein_id="CAE49863.1" FT /translation="MSENNGDNIELLSENDVARTIARIAHQIIEKTALDAPGTKPVLLL FT GIPSGGVPIASQIAQKIKEFTGVDVPVGSLDVTLYRDDLRKNPHRALQPTNLPLDGING FT HHIILVDDVLYSGRTIRAALDALRDIGRPDIIQLAVLVDRGHRQLPIRADYVGKNLPTS FT RGEDVQVFIKEIDGRTAVVLTRGTEEA" FT misc_feature complement(1349842..1350327) FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain" FT CDS 1350598..1351959 FT /transl_table=11 FT /locus_tag="DIP1336" FT /product="Conserved hypothetical protein" FT /note="C-terminal region similar to Mycobacterium FT tuberculosis hypothetical 31.7 kDa protein Rv2216 or MT2273 FT or MTCY190.27 SWALL:YM16_MYCTU (SWALL:Q10403) (301 aa) FT fasta scores: E(): 4e-32, 36.51% id in 293 aa, and FT N-terminal region to Bacillus halodurans BH1480 protein FT SWALL:Q9KCT9 (EMBL:AP001512) (144 aa) fasta scores: E(): FT 0.047, 27.35% id in 106 aa" FT /protein_id="CAE49864.1" FT /translation="MSLHTSHVIPAPRIDVWEWHTRPGAVFRLTPPFLPLRPLEQATSL FT AKGTTVFALPAGLRWEARHDLSGYIQHHRFTDVCINAPVKSLASWRHIHDFTDHPSGTL FT ITDTVHTRAPRTTLSPAFAYRQHQLINDIQAQQRFYELTRSNPTESTPLTIGLTGSRGL FT VGRALTAQLTTLGHTVVQLVRGESKPHQRHWDPAHPAPNLLEGLDALIHLAGEPILGRF FT NDAHKADIRDSRIEPTRQLSQLVQKSSTCRTMVSASAIGYYGHARGDEILDEGSTQGDD FT FLASVCEEWEAASRTDATSNKRIVNIRTGVVMSGRGGMLPVLKAVFSVGLGGPFRGSNP FT WMSWIAIDDLCDIYIRAVLDPKLSGAINAVAPNPIKNQDFVDALAKELKRPAKMTISSL FT GPAILLGQQGAKELALADQRVQPRVLNNLDHHFRYVDIRSCLAHELGGENLLDI" FT CDS 1351965..1352402 FT /transl_table=11 FT /locus_tag="DIP1337" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49865.1" FT /translation="MNKLTIAPTWNISTIEEILTDENLKFVRTDQCITTGFINQSITIQ FT KMEHMVYMGSAWRATLALDEAAQLLAVCNEWNKTTLLPCVSFHEESDNLLHVTTQRSFD FT TSAGVSFNQLGAFTVSTIDSFVGVWNHFDSQFPHRVTWENQ" FT CDS 1352402..1352812 FT /transl_table=11 FT /locus_tag="DIP1338" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49866.1" FT /translation="MDVPTAISIERVVKEMKSLEITLHITPTGPSVGFANINGFNFQFI FT VLPSVLIARADRYLSETKSDPRIYLASNEVNNRTVRGGIFVVDNSAAPIMRAEVDICSA FT AGLTDSQLHMCLSNSVNDVLDLQHSWAKATAI" FT stem_loop complement(1352811..1352856) FT /note="Score 53: 19/20 (95%) matches, 0 gaps" FT CDS complement(1352866..1353414) FT /transl_table=11 FT /locus_tag="DIP1339" FT /product="Putative transcription termination related FT protein" FT /note="Similar to Mycobacterium leprae N utilization FT substance protein B homolog NusB or ML0523 SWALL:NUSB_MYCLE FT (SWALL:Q9CCR9) (190 aa) fasta scores: E(): 1.1e-19, 45.16% FT id in 155 aa, and to Escherichia coli transcription FT termination; L factor NusB or SsyB or B0416 or Z0518 or FT ECS0469 SWALL:NUSB_ECOLI (SWALL:P04381) (139 aa) fasta FT scores: E(): 4.9e-06, 32.35% id in 136 aa" FT /protein_id="CAE49867.1" FT /translation="MKSQETRSSWKRRGSRYKARRRAVDILFEAEMRDIDPVAIVEDRV FT VLSRLNGTDVNQVPSYTKEIVSGAAMELDRLDELIAAHLAEDWSLERIMTVDRAILRVS FT VWELIFNPDVPLATAIIEGVELASEYSTDVSPAYVHALLDSIAKNIDEYRAGSVTPVEN FT SEAEAAGYPVEESIEEDSQ" FT misc_feature complement(1352965..1353366) FT /note="HMMPfam hit to PF01029, NusB family" FT misc_feature complement(1352977..1353345) FT /note="BlastProDom hit to PD005242, PD005242" FT CDS complement(1353483..1354046) FT /transl_table=11 FT /gene="efp" FT /locus_tag="DIP1340" FT /product="elongation factor P" FT /note="Similar to Corynebacterium glutamicum elongation FT factor P Efp SWALL:EFP_CORGL (SWALL:Q45288) (187 aa) fasta FT scores: E(): 2.6e-61, 85.02% id in 187 aa, and to FT Escherichia coli elongation factor P Efp or B4147 or Z5752 FT or ECS5128 SWALL:EFP_ECOLI (SWALL:P33398) (187 aa) fasta FT scores: E(): 2.6e-25, 42.85% id in 182 aa" FT /protein_id="CAE49868.1" FT /translation="MATTADFKNGLVLKIDNKLQQIIEFQHVKPGKGPAFVRTKLKDVV FT SGKVTDKTFNAGVKVETATVDRRDMTYLYNDGSSYVVMDEKTFEQAELAPHIFGDAARF FT LLENTTVQVSFHEGEPLFAELPISLDLRIEHTDPGLQGDRSTGGTKPATLETGAEIQVP FT LFIETGNVVKVDTRDGSYLSRVNN" FT misc_feature complement(1353492..1354046) FT /note="HMMPfam hit to PF01132, Elongation factor P (EF-P)" FT misc_feature complement(1353540..1353599) FT /note="ScanRegExp hit to PS01275, Elongation factor P FT signature." FT CDS complement(1354148..1355245) FT /transl_table=11 FT /locus_tag="DIP1341" FT /product="Putative metallopeptidase" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 38.8 kDa protein PepQ or Rv2535c or MTCY159.21 SWALL:P95018 FT (EMBL:Z83863) (372 aa) fasta scores: E(): 2.3e-52, 45.64% FT id in 344 aa, and to Bacillus halodurans xaa-pro FT dipeptidase BH2800 SWALL:Q9K950 (EMBL:AP001516) (355 aa) FT fasta scores: E(): 1.2e-43, 41.57% id in 356 aa" FT /protein_id="CAE49869.1" FT /translation="MTMPLADTRFLQRRRALSAQLAAKRIDAMLVTHLTHIRYLSGFTG FT SNAALIINKDLSARISTDGRYITQIAEQVPDIESLMARNCAPALLSDINGPKRVGFEAD FT YLSVSQCEELRKSAGSDVELIPVTGAIEKLRLIKDSLEIESLRSVAKIANTAFQELIDD FT GLIAAGRTERAIAADLEYRMRIKGAERPSFDTIVASGPNSAKPHHGAGDRVICEGDIVT FT IDFGAYADGYNSDTTRTVIVGQPTAFAREIYSIVLEAQRAGCAAAVPGTSLVDVDKACR FT EVIENAGYGEYFVHSTGHGLGLDVHEQPAAAVTGSGVLEENMTLTIEPGIYVPGKGGVR FT IEDSLVIRSGSAENLTSLSKDLLIF" FT misc_feature complement(1354157..1354840) FT /note="HMMPfam hit to PF00557, metallopeptidase family M24" FT misc_feature complement(1354259..1354297) FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT misc_feature complement(1354325..1354363) FT /note="ScanRegExp hit to PS00491, Aminopeptidase P and FT proline dipeptidase signature." FT misc_feature complement(1354541..1354591) FT /note="FPrintScan hit to PR00599, Methionine FT aminopeptidase-1 signature" FT CDS complement(1355271..1355711) FT /transl_table=11 FT /gene="aroQ" FT /locus_tag="DIP1342" FT /product="3-dehydroquinate dehydratase" FT /EC_number="4.2.1.10" FT /note="Similar to Corynebacterium pseudotuberculosis FT 3-dehydroquinate dehydratase AroQ SWALL:AROQ_CORPS FT (SWALL:P96750) (146 aa) fasta scores: E(): 6.8e-43, 79.45% FT id in 146 aa, and to Corynebacterium glutamicum FT 3-dehydroquinate dehydratase AroQ or AroD SWALL:AROQ_CORGL FT (SWALL:O52377) (145 aa) fasta scores: E(): 1.4e-23, 57.03% FT id in 135 aa" FT /protein_id="CAE49870.1" FT /translation="MNVVILNGPNLDRLGKRQPEIYGSTTLADVELELFRLAGQLGVDV FT ECKQSNYEGELIDWIHCAADAGNPVIINPGGLTHTSVALRDALAEISDGPGFIEVHISN FT IHAREEFRHHSYLSPIATGVIAGLGTIGYELALRYVVSTLNS" FT misc_feature complement(1355274..1355711) FT /note="HMMPfam hit to PF01220, Dehydroquinase class II" FT misc_feature complement(1355643..1355696) FT /note="ScanRegExp hit to PS01029, Dehydroquinase class II FT signature." FT CDS complement(1355712..1356791) FT /transl_table=11 FT /gene="aroB" FT /locus_tag="DIP1343" FT /product="3-dehydroquinate synthase" FT /EC_number="4.2.3.4" FT /note="Similar to Corynebacterium glutamicum FT 3-dehydroquinate synthase AroB SWALL:AROB_CORGL FT (SWALL:Q9X5D2) (366 aa) fasta scores: E(): 5.2e-85, 66.57% FT id in 356 aa, and to Escherichia coli 3-dehydroquinate FT synthase AroB or B3389 SWALL:AROB_ECOLI (SWALL:P07639) (362 FT aa) fasta scores: E(): 1.7e-33, 36.76% id in 321 aa" FT /protein_id="CAE49871.1" FT /translation="MPTIEVKSSNPYQVRIDKQLNTEIVTTAQLSGAENVAIITQPPLL FT ERAGTLEKMLAQAGLASHVLAVPDAETGKTLEVAGRCWDQLGEWGFSRSDLIIGFGGGA FT ATDLAGFVAAAWMRGIKVIQVPTTLLAMVDAAVGGKTGINTAAGKNLVGAFHEPIAVFI FT DVDHLDSLPQDEIIAGSAEIIKTGFIADPRILELYEKDPAACLLKDGHLPELIARSIAV FT KSKVVSQDLKESGLREILNYGHTFGHAVELRENFSWRHGNAVAVGMVFVAELANIRGLI FT SDELVERHRKILKSIGLPTSYSQGHFEELHQGMKHDKKNRNSMIRFVALRDISDVVRLE FT GPTDEELFQAYSRLALEMS" FT misc_feature complement(1355736..1356749) FT /note="HMMPfam hit to PF01761, 3-dehydroquinate synthase" FT CDS complement(1356838..1357359) FT /transl_table=11 FT /gene="aroK" FT /locus_tag="DIP1344" FT /product="shikimate kinase" FT /EC_number="2.7.1.71" FT /note="Similar to Corynebacterium glutamicum shikimate FT kinase AroK SWALL:AROK_CORGL (SWALL:Q9X5D1) (169 aa) fasta FT scores: E(): 6.9e-29, 60.97% id in 164 aa, and to FT Escherichia coli shikimate kinase I AroK or B3390 FT SWALL:AROK_ECOLI (SWALL:P24167) (172 aa) fasta scores: E(): FT 4.5e-13, 38.55% id in 166 aa" FT /protein_id="CAE49872.1" FT /translation="MSGRVRPIVVLVGPPGSGKTTIGRRLANALNTSVVDSDVLIEQLQ FT GKPCGVVFAELGEPNFRDLEAEVIDFALTTAGVVSLGGGAVTTESVRQKLRAQIVVWVD FT VSAAEGVRRTAVENSRPLLDTTNPLERYSELLAQRRDFYKEVADYRAHTDGRSPQQIVA FT DILGFLETLR" FT misc_feature complement(1356850..1357341) FT /note="HMMPfam hit to PF01202, Shikimate kinase" FT misc_feature complement(1357015..1357068) FT /note="FPrintScan hit to PR01100, Shikimate kinase family FT signature" FT misc_feature complement(1357099..1357128) FT /note="FPrintScan hit to PR01100, Shikimate kinase family FT signature" FT misc_feature complement(1357102..1357176) FT /note="ScanRegExp hit to PS01128, Shikimate kinase FT signature." FT misc_feature complement(1357153..1357179) FT /note="FPrintScan hit to PR01100, Shikimate kinase family FT signature" FT misc_feature complement(1357222..1357263) FT /note="FPrintScan hit to PR01100, Shikimate kinase family FT signature" FT misc_feature complement(1357261..1357338) FT /note="ProfileScan hit to PS50101, P-loop nucleotide FT binding motif (does not find all)." FT misc_feature complement(1357288..1357335) FT /note="FPrintScan hit to PR01100, Shikimate kinase family FT signature" FT misc_feature complement(1357300..1357323) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1357394..1358605) FT /transl_table=11 FT /gene="aroC" FT /locus_tag="DIP1345" FT /product="chorismate synthase" FT /EC_number="4.2.3.5" FT /note="Similar to Corynebacterium glutamicum chorismate FT synthase AroC SWALL:AROC_CORGL (SWALL:Q9X5D0) (410 aa) FT fasta scores: E(): 7.5e-119, 77.11% id in 402 aa, and to FT Bacillus subtilis chorismate synthase AroF SWALL:AROC_BACSU FT (SWALL:P31104) (368 aa) fasta scores: E(): 2.6e-62, 49.03% FT id in 363 aa" FT /protein_id="CAE49873.1" FT /translation="MLRWTTAGESHGQALIAMLEHMPAGVPISREEISFQLGRRRLGFG FT RGARMKFEADEVSILGGVRHGYTIGSPIAIMVGNTEWPKWTTIMSADAIDESDPDVAAA FT MSSGRGARLTRPRPGHADFAGMVKYNHDEARPILERSSARETAARVAAATVARSFLRET FT LGVEVFSHVISIGRSEIDQTVCPTFEDLGRIDDSPVRSASAQAEASMIDQINAAKKQGD FT TLGGIVEVIVNGLPIGLGSHISGEDRLDAQLAAALMGIQAIKGVEIGDGFEEARRLGSE FT AHDEIVLRDGVVARQSNRAGGIEGGMTNGESLRVRAAMKPISTVPRALQSIDMDSGKRA FT TGIHQRSDVCAVPAAGVVAEAMVALVLARAVLEKFGGDSLAETKRNIAAYNEYVKTRIA FT FDGE" FT misc_feature complement(1357481..1358542) FT /note="HMMPfam hit to PF01264, Chorismate synthase" FT misc_feature complement(1357520..1357570) FT /note="ScanRegExp hit to PS00789, Chorismate synthase FT signature 3." FT misc_feature complement(1357562..1358563) FT /note="BlastProDom hit to PD002941, PD002941" FT misc_feature complement(1358141..1358191) FT /note="ScanRegExp hit to PS00788, Chorismate synthase FT signature 2." FT CDS complement(1358683..>1359189) FT /transl_table=11 FT /locus_tag="DIP1346" FT /product="Putative membrane protein" FT /note="Similar to the C-terminal region of Aeromonas FT salmonicida type 4 prepilin-like proteins leader peptide FT processing enzyme [includes: leader peptidase TapD or PilD] FT SWALL:LEP4_AERSA (SWALL:O68964) (291 aa) fasta scores: E(): FT 0.012, 26.71% id in 146 aa" FT /protein_id="CAE49874.1" FT /translation="EQCFPHTIERMGEALKILGITSVGSWWAFRLILFDCTTRRLPNRY FT TLSAAACSFIWAVLTQHFEWILYAGIWVLPYVFIGSLSAMRGIGGGDIKLSMALGIVAA FT AHAGAQGVVVASICSSCLSIVLGLILRFLHSKRCNSTKYSNLPHGPSMIIATWFVVVWS FT QITPT" FT misc_feature complement(order(1358695..1358760,1358800..1358865, FT 1358926..1358991,1359088..1359144)) FT /note="4 probable transmembrane helices predicted for FT DIP1346 by TMHMM2.0" FT CDS complement(1359196..1360065) FT /transl_table=11 FT /locus_tag="DIP1347" FT /product="Putative shikimate dehydrogenase" FT /note="Similar to Mycobacterium leprae putative shikimate FT 5-dehydrogenase AroE or ML0515 SWALL:Q9CCS7 (EMBL:AL583918) FT (278 aa) fasta scores: E(): 5e-33, 45.42% id in 273 aa, and FT to Bacillus subtilis shikimate 5-dehydrogenase AroD FT SWALL:AROE_BACSU (SWALL:P54374) (280 aa) fasta scores: E(): FT 1.2e-13, 28.36% id in 282 aa" FT /protein_id="CAE49875.1" FT /translation="MPGHFILTIMIHFRAAVLGHPIEHSLSPLLHNAGYAALGLSQWSY FT GRFDCDSQQLSELVDKCDPSFQGFSVTMPCKFEALEYATSVSERAQRIGSANTLVRAEN FT GWYADNTDTEGVRGALEILFSDRGGAAEALKNTRAIVVGAGGTSRPAIWTLGTLGVAEI FT VVVNRSDRREELEPVLEGEPTKISFVGFDSNLRSHAQSASVVISTVPSVGVSDYIDDLV FT HAPVLDVIYDPWPTPLIQHAQKKGVPCIGGHIMLLHQALSQFEQFTGVKAPREAMQKAL FT FDHLFGDN" FT misc_feature complement(1359256..1359978) FT /note="HMMPfam hit to PF01488, Shikimate / quinate FT 5-dehydrogenase" FT misc_feature complement(1359565..1359681) FT /note="ProfileScan hit to PS50204, UBA/THIF-type NAD FT binding fold." FT CDS complement(1360160..1361308) FT /transl_table=11 FT /locus_tag="DIP1348" FT /product="Putative secreted protein" FT /note="Similar to, although shorter in its N-terminal FT region than Mycobacterium tuberculosis CDC1551 conserved FT hypothetical protein MT2630 SWALL:AAK46942 (EMBL:AE007097) FT (417 aa) fasta scores: E(): 2.3e-52, 41.38% id in 389 aa, FT and similar to Haemophilus influenzae hypothetical protein FT HI0457 SWALL:YCEG_HAEIN (SWALL:P44720) (347 aa) fasta FT scores: E(): 7.2e-14, 28.76% id in 365 aa" FT /protein_id="CAE49876.1" FT /translation="MRMESKYVKRRQRGLAVLVAALVLIIGSVIYIGVHFVNGGSDYKG FT AGNGEMALVEIKEGSSLSELGPELAERGIVASNDAFQGAAFSNPGASQVKPGFYRLEKK FT MSAAEAVKALLDPSRKIDMLEIHGGSTLIDVTVVKGQTRKGIYSMISDVTCSQGSTKCI FT SSEELQQVGATASLEELGVPDWARDAVAARANDPKRLEGLIVPGSYIVNPEKDALGILQ FT DLIKRGAETFEKTSLAQRAQTVGLSPYELLTAASLVEREAPAGDFDKVARVILNRLAKP FT MRLEFDSTVNYGLAEQEVATTNEDRARVTAWNTYAKDGLPDTPIASASVQAIEALENPA FT EGDWLYFVTIDKNGTTVFTNNFEDHQNATRDSIENGVLDSNR" FT misc_feature complement(1360184..1361284) FT /note="HMMPfam hit to PF02618, Uncharacterized BCR, YceG FT family COG1559" FT misc_feature complement(1361192..1361308) FT /note="Signal peptide predicted for DIP1348 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.480 between residues 39 and 40" FT misc_feature complement(1361204..1361269) FT /note="1 probable transmembrane helix predicted for DIP1348 FT by TMHMM2.0" FT CDS complement(1361421..1361972) FT /transl_table=11 FT /locus_tag="DIP1349" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT MLl0513 SWALL:Q9CCS9 (EMBL:AL583918) (184 aa) fasta scores: FT E(): 1.1e-09, 46.1% id in 167 aa, and to Bacillus FT halodurans BH1269 protein SWALL:Q9KDE4 (EMBL:AP001511) (140 FT aa) fasta scores: E(): 1.7e-06, 36.8% id in 144 aa" FT /protein_id="CAE49877.1" FT /translation="MTVQSSRCKDFYMVVQPDIPGDNDPGMGRRLGVDVGTVRIGLAMS FT DSGARMAMPFETLARETGLKDSDKQDIDRIAEVICDNHIVEVVVGLPRDLKGNGSKSVK FT HAKDVAFRIRRRMHKNGWEHVAVKMADERLTTVVATQALRASGVSEKKGRRVVDQAAAV FT EILQSWLDARINVLENRTIP" FT CDS complement(1362202..1364868) FT /transl_table=11 FT /gene="alaS" FT /locus_tag="DIP1350" FT /product="alanyl-tRNA synthetase" FT /EC_number="6.1.1.7" FT /note="Similar to Bacillus subtilis alanyl-tRNA synthetase FT AlaS SWALL:SYA_BACSU (SWALL:O34526) (878 aa) fasta scores: FT E(): 3.2e-113, 39.84% id in 891 aa, to Streptomyces FT coelicolor alanine tRNA synthetase AlaS SWALL:Q9KXP9 FT (EMBL:AL357523) (890 aa) fasta scores: E(): 4.6e-174, FT 53.04% id in 886 aa, and to Bacillus subtilis alanyl-tRNA FT synthetase AlaS SWALL:SYA_BACSU (SWALL:O34526) (878 aa) FT fasta scores: E(): 3.2e-113, 39.84% id in 891 aa" FT /protein_id="CAE49878.1" FT /translation="MQTHEIRERFTNHFVKAGHEAVPSASLILDDPNLLFVNAGMVPFK FT PYFLGQQNPPFPNGTATSIQKCVRTLDIEEVGITTRHNTFFQMAGNFSFGQYFKEGAIT FT HAWQLLTGTVAEGGLGLDPERLWVTVYLDDDEAAEIWNKKIGVPSERIQRLGMADNYWS FT MGIPGPCGPCSEIYYDRGPEYGAEGGPIADDNRYMEIWNLVFMENERGEGIGKDNFEIV FT GPLPKKNIDTGMGIERVACILQGVDNVYETDLLRPVINVAEELTGATYGTNDDDNIRFR FT VIADHSRTGMMLILDGVTPGNEGRGYILRRLLRRIIRSAHLLGAKGKTLEKFMNTIMDT FT MTPSYPEIADNRERILRVAITEEKAFLKTLASGTELFEDKADQVKNSGNKVLDGAAAFK FT LHDTYGFPIDLTLEMAAEAGLNVDIEGFNSLMAEQRARAKADNRAKKHGHADLSIYREW FT VDEHPTVFTGYDELTTDSKVLGLLSAGNKVNEIKAGEEVEVILEASPLYAEAGGQLGDR FT GQILMGDTVLKVNDVQKIGKKLWVHKATVAQGGLSVGDVVTAQVDSDWRHAARQAHTGT FT HLIHAALRQVLGPTAVQAGSMNKPGYLRFDFNYTESLTPRQLEEIQNITNQAVDSDWDV FT NTIETSLEEAKAMGALALFGENYGSEVRVIEVGGPFSIELCGGTHVTHSSQIGPVAILG FT ESSVGSGVRRIEAYTGLDSFKYLAKEQALVENIASSMKVKPEELPDRIAALTQKLKDAE FT KAIADMRSAQLMAQATGLVAGAIEVNGVKLVAQRVSDVENMGDLRSLAADIKQRLDDVP FT AVVALVGEDASGKAPFVVGATKAAVSAGYKANAYAKILGQYIEGNGGGKPDMAQGSARN FT SSGFDQGIAAVKAEMSA" FT misc_feature complement(1362217..1362441) FT /note="HMMPfam hit to PF02272, DHHA1 domain" FT misc_feature complement(1362724..1364856) FT /note="HMMPfam hit to PF01411, tRNA synthetases class II FT (A)" FT misc_feature complement(1363915..1363956) FT /note="FPrintScan hit to PR00980, Alanyl-tRNA synthetase FT signature" FT misc_feature complement(1363978..1364028) FT /note="FPrintScan hit to PR00980, Alanyl-tRNA synthetase FT signature" FT misc_feature complement(1364137..1364178) FT /note="FPrintScan hit to PR00980, Alanyl-tRNA synthetase FT signature" FT misc_feature complement(1364242..1364277) FT /note="FPrintScan hit to PR00980, Alanyl-tRNA synthetase FT signature" FT misc_feature complement(1364623..1364658) FT /note="FPrintScan hit to PR00980, Alanyl-tRNA synthetase FT signature" FT RBS complement(1364878..1364881) FT CDS complement(1365030..1366400) FT /transl_table=11 FT /locus_tag="DIP1351" FT /product="Conserved hypothetical protein (putative ATP/GTP FT binding protein)" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 47.5 kDa protein Rv2559c or MT2636 or MTCY9C4.09 FT SWALL:YP59_MYCTU (SWALL:Q50739) (452 aa) fasta scores: E(): FT 3.1e-95, 66.59% id in 455 aa, and to Streptomyces FT coelicolor conserved ATP/GTP binding protein SC9C5.30c FT SWALL:Q9KXP4 (EMBL:AL357523) (451 aa) fasta scores: E(): FT 4.3e-84, 63.52% id in 414 aa" FT /protein_id="CAE49879.1" FT /translation="MKSIMDSLFDSPVQTARSSSDSDAHNFFKAGPYAPLAARMRPQSL FT DEVVGQRHLLDSGKPLQRLIAGSGDASVILYGPPGTGKTTIASLISAGTGHEFVGLSAL FT NSGVKEIREVIDQARRNLIHGKRTVLFIDEVHRFSKTQQDALLAAVENRTVLLVAATTE FT NPSFSVVAPLLSRSLILQLKPLTHDDIKTVLLHALQDKRGLDNRITISDEALEQLVLLS FT GGDARRSLTYLEAASESLADGEELTPEIIRHNVDKAIVRYDRDGDQHYDVVSAFIKSMR FT GSDVDAALHYLARMIDAGEDPRFIARRLVIHASEDVGMADPQALSVAVAASQAVALIGM FT PEARINLAQATIHLATAPKSNAVITAIDAALADVKQGKTGPVPAHLRDGHYAGAKQLGN FT AVGYKYPHDDPRGIVEQQYIPNGLEDVVYYRPSEHGAEQRIESYLGKLRRIVRGQRR" FT misc_feature complement(1365264..1365287) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature complement(1365456..1366187) FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA)" FT misc_feature complement(1365678..1365938) FT /note="ProfileScan hit to PS50150, Replication factor C FT conserved domain." FT misc_feature complement(1365846..1366196) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(1366149..1366172) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1366425..1367687) FT /transl_table=11 FT /locus_tag="DIP1352" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49880.1" FT /translation="MMFESHSQIISAAEELLTKRYGGSQSLTDWDRLAGSGAAVVLRAR FT VASSPFFPNRSVVVKYIPPTGRLIDESTLMREVVSYQFTTSLNADVRPGPVLLAYDVEQ FT HLLVISDSGDGDTFAELLERHENDVRIGILRNLGEAIGKLHVGTAAKEQDFNILLHRML FT VKHPEVQPMHGFRERLLRLNIGVGITLVEQAGITVPDVVKSFAQEAMRRLVTGQHRAFT FT PFDLSPDNIIVADRTEFLDYEWAGFRDAAFDVASVIAGFPQYLFARPVSDAEADIFIES FT WVQQVGDMWPNVRNTPRLHARILTALIGWAFSSVTMMYLGSSSEAYEELFHKIGTEKAT FT AFDVEEIVKEIAATGDILLGTFVPETSEDADLVALLRQDLYETFEALNRFAQRESDTRF FT PVVADFAQAVVDLLTDDESTE" FT CDS complement(1367810..1369615) FT /transl_table=11 FT /gene="aspS" FT /locus_tag="DIP1353" FT /product="aspartyl-tRNA synthetase" FT /EC_number="6.1.1.12" FT /note="Similar to Mycobacterium tuberculosis aspartyl-tRNA FT synthetase AspS or Rv2572c or MT2648 or MTCY227.29 FT SWALL:SYD_MYCTU (SWALL:Q50649) (594 aa) fasta scores: E(): FT 2.1e-181, 71.26% id in 595 aa, and to Bacillus subtilis FT aspartyl-tRNA synthetase AspS SWALL:SYD_BACSU FT (SWALL:O32038) (592 aa) fasta scores: E(): 3.3e-109, 47.67% FT id in 602 aa" FT /protein_id="CAE49881.1" FT /translation="MHVLRTHLAGDLGKETAGQTVTLTGWVSRRRDHGGVIFIDLRDSS FT GLVQVVFRENDVAEQAHHLRSEFCIKVTGEVEARPEGSENPNLASGAIEVNVTDLEILN FT EAAPLPFQIDDVSQGGEVGEETRLKYRYLDLRRPNQGAALRLRSQANKAARNVLDSHDF FT VEIETPTLTRSTPEGARDFLVPARLKPGSWYALPQSPQLFKQLLMVAGMERYYQIARCY FT RDEDFRADRQPEFTQLDIEMSFVDQDDVIALAEEIVSSLWKLIGYEIPTPIPRMTYADA FT MRLYGSDKPDLRFDIKIVECTDFFKNTTFRVFQNEYVGAVVMDGGASQPRRQLDAWQEW FT AKQRGAKGLAYILVGENGELTGPVSKNITDEERAGIAAHVGAKPGDCIFFAAGETKSSR FT ALLGAARNEIAKKLDLIKEGDWAFTWVVDAPLFEPSSDATASGDVALGHSKWTAVHHAF FT TSPKPEWLDSFDENPGEATAYAYDIVCNGNEIGGGSIRIHRRDVQERVFKVMGITEDEA FT REKFGFLLDAFAFGAPPHGGIAFGWDRIVSLLGGFSSIRDVIAFPKSGGGVDPLTDAPA FT PIPLEQRRETGVDFKPKKKTDESAV" FT misc_feature complement(1367918..1368157) FT /note="HMMPfam hit to PF00152, tRNA synthetases class II FT (D, K and N)" FT misc_feature complement(1367999..1368043) FT /note="FPrintScan hit to PR01042, Aspartyl-tRNA synthetase FT signature" FT misc_feature complement(1368125..1368175) FT /note="FPrintScan hit to PR01042, Aspartyl-tRNA synthetase FT signature" FT misc_feature complement(1368410..1368712) FT /note="HMMPfam hit to PF02938, GAD domain" FT misc_feature complement(1368833..1369249) FT /note="HMMPfam hit to PF00152, tRNA synthetases class II FT (D, K and N)" FT misc_feature complement(1368899..1368952) FT /note="FPrintScan hit to PR00982, Lysyl-tRNA synthetase FT signature" FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT misc_feature complement(1368938..1368979) FT /note="FPrintScan hit to PR01042, Aspartyl-tRNA synthetase FT signature" FT misc_feature complement(1368965..1369006) FT /note="FPrintScan hit to PR00982, Lysyl-tRNA synthetase FT signature" FT misc_feature complement(1368992..1369030) FT /note="FPrintScan hit to PR01042, Aspartyl-tRNA synthetase FT signature" FT misc_feature complement(1369109..1369141) FT /note="FPrintScan hit to PR00982, Lysyl-tRNA synthetase FT signature" FT misc_feature complement(1369307..1369555) FT /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding FT domain" FT CDS 1369837..1370721 FT /transl_table=11 FT /locus_tag="DIP1354" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 30.8 kDa protein Rv2575 or MT2651 or MTCY227.26c FT SWALL:YP75_MYCTU (SWALL:Q50646) (293 aa) fasta scores: E(): FT 1.8e-45, 44.74% id in 295 aa, and to Agrobacterium FT tumefaciens strC58 AGR_C_3948p SWALL:AAK87920 FT (EMBL:AE008134) (305 aa) fasta scores: E(): 1.1e-31, 36.66% FT id in 300 aa" FT /protein_id="CAE49882.1" FT /translation="MTFRGGIEKPENLARSGGGGGGRIAAGGGIGTLLLVGLFLLMGGN FT PSDLGQIIGSDSAQNQQQAPSGTLEHCKTTDDANAHADCRVEFTAISVNQMWQEQLQKQ FT AGIAFEKPNITVFSQAVSTGCGTASSATGPFYCPRDRTAYFDVSFFDSLQRYGGENTPF FT AQEYIVAHEIGHHIQNLEGTLGLSDYNDPGPNSNAVKIELQADCYAGVWGHYADKGDNA FT FLEPITKQQVNDAITAARAVGDDNIQERATGRVNTESFTHGSSDQRQRAFLAGYNSGKM FT SSCDTLDRHVYKD" FT misc_feature 1369897..1369965 FT /note="1 probable transmembrane helix predicted for DIP1354 FT by TMHMM2.0" FT misc_feature 1370338..1370367 FT /note="ScanRegExp hit to PS00142, Neutral zinc FT metallopeptidases, zinc-binding region signature." FT CDS complement(1370802..1373456) FT /transl_table=11 FT /locus_tag="DIP1355" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor putative FT bifunctional protein SCBAC20F6.07 SWALL:Q9ADE3 FT (EMBL:AL590942) (800 aa) fasta scores: E(): 5e-37, 39% id FT in 700 aa, and to Streptomyces griseus hypothetical 77.7 FT kDa protein SWALL:BAB64333 (EMBL:AB056583) (724 aa) fasta FT scores: E(): 2.5e-32, 34.85% id in 680 aa" FT /protein_id="CAE49883.1" FT /translation="MSTLRSQGTYLREVAQRAQLLLNSLLEPHEPARFNTHGKISDVWV FT VPQTAISWPPHLFTHEEFSKDHIEVAEILEKFIESTSGIVDLLHKTKIGVWSTLTRRVS FT STANQQFESAATELENLLANPELQVQLSRVTEYLRRYDRAESAYKSGVHHFLVENQDSP FT YGKAVRSSLASAMQLPEVCIDNLSKEYVRPAILLCEQLRAHPLSPWTLQRKALQAENKI FT IQCRALALLSSLSIDSLSQVTSERVSVTAIKRQGITSVAEIISRSVEDLEQIPGVGQQT FT AKRVKAAAQTLYSEALAQPLSTLGSEQSTELEALLNILYHYGRSREALSDELDRIDRLE FT WYLQPVITHEKALWRSIPPAYFVIYSKGSGGHNTAYLQFIDDISWANIALSIPDLLSEG FT QGSVDIWKDYCERPAHYQSLWSAIRGNDQTPYSQSGLSSETLERIRALKLNTSLLRDVF FT LRGYQSFGAKFVIVQRKVILGDEMGLGKTVQAIAAAAHVTAEKSFENRIKILIIVPASL FT MTNWAREWEKFCNIPVQIAHGENKQKAVAQWNDTAGALIVTYDGARTMRLLGATVVIID FT EAHYIKNPEAKRSRAVSRIIAESEYALLLSGTPLENRIEEFCTLVSYLDSHCAISAPRL FT ASAFKAHIAHLYLRRNQGDVLDELPEKIDHTEWVELSAEDEHLYRQAVHERNWMLMRRV FT AMLAARPDCAKMERLIDIVKEAESAGKNVIIFSYFRSVLERIEKDLGEYVAGSITADVP FT PQRRQQLIDELGNTGRHVLLLQIVAGGVGLNIQKASVVIFTEAQVKPTLVDQAIARAHR FT MGQRDPVTVYRLFGADTVDERLTALLEHKRAVFDNYARDAEAAEVFDAVDVSEGELARN FT IIELEHDRLQIDN" FT misc_feature complement(1371015..1371257) FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature complement(1371015..1371269) FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT misc_feature complement(1371531..1372094) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(1371594..1372073) FT /note="HMMPfam hit to PF00176, SNF2 and others N-terminal FT domain" FT misc_feature complement(1372593..1372682) FT /note="HMMPfam hit to PF00633, Helix-hairpin-helix motif." FT misc_feature complement(1372593..1372685) FT /note="ProfileScan hit to PS50120, Helix-hairpin-helix FT motif." FT CDS complement(1373535..1375556) FT /transl_table=11 FT /locus_tag="DIP1356" FT /product="Putative membrane protein" FT /note="Similar to Bacillus subtilis hypothetical 84.1 kDa FT protein in hemY-gltT intergenic region YhgE FT SWALL:YHGE_BACSU (SWALL:P32399) (775 aa) fasta scores: E(): FT 5.1e-22, 25.23% id in 761 aa, and to Lactococcus lactis FT hypothetical protein YjaE or LL0882 SWALL:Q9CH57 FT (EMBL:AE006322) (799 aa) fasta scores: E(): 6.5e-20, 24.68% FT id in 790 aa" FT /protein_id="CAE49884.1" FT /translation="MNLFHIGTEFRRFGHGKLPPIAIVVIMLMPLLFGGLFVWSYWDPI FT GHLNKLPVAVVNSDTGVTKEGKTINAGEQITHSLVDQQQAKFIEVSADQARKGIADGTY FT YFAIEFPTDFSQAATSVKDPQPHQAKLNAVYNNANGFLATMLGNQVVGRVLAAVNENLG FT SQVANQLLVGFNTIGQGLGAAADGAGQLADGSHKAHDGADKLADGSTQLNNGLQQANDG FT AHKLYDGAGQLDQGIHTASNGADALADGLTKLNAATDTLGNGAGQVSAGVDKLVGVAQQ FT ASDAQAQLTVPLVNLSAQLRATGIPQAIDLANSADGIINSINAAGIGPQSDMMTQLSKL FT RNGASEIHRQLSDPTAQYRAGINSATEGAQKLSTGLHQLSDGSEKLVIGTKTLADGTTK FT LSAGSQQLTVGASQLSSGLVRLDEGASELSLKLGESKDKIPQFPDDTIADSARNVSTPV FT AENVARDSLSLFGLGLAPMFIALGLFMGGTVTFMLMRPLQRRVVDSGVTPFRVVLASYI FT PAVIVGFCQATIMFLVQRYAIGLHAHNEFLLWAAMCLTSMCFMAITQGLNTVFGSTVGR FT VLCIAFMSLQIVSSGGLYPPETQPAPLRWFHTFDPMTYSVNILRQAIYPTDVALDHRAV FT QGVSVLIFIGALFLLFSTIAAMRERQMKMKDFHPEVAV" FT misc_feature complement(order(1373589..1373654,1373775..1373825, FT 1373847..1373912,1373958..1374023,1374084..1374149, FT 1375431..1375496)) FT /note="6 probable transmembrane helices predicted for FT DIP1356 by TMHMM2.0" FT misc_feature complement(1375353..1375376) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1375574..1376308) FT /transl_table=11 FT /locus_tag="DIP1357" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49885.1" FT /translation="METTHSLTTDNAPTEDQPILSVTDLHMVSGTHLPELKIYAGLSLV FT HCGRENSATTLSMTLAGRMKPISGTIELKVQDSDKVLTTPRQLHKAVALAGVPELDSLE FT RLVPVTAAVREQLAWSQPWYRRVPRDVTKSETFINAAKLLDLPNSKEFARQSIGDLDPL FT TRFRLRIALALIARPHTDLLIVDDIDQIRSLRLRADLLRELKNIAASIPVVAMSANDDV FT DKIADHEIHVAGALQRKQKAKA" FT CDS 1376471..1377061 FT /transl_table=11 FT /locus_tag="DIP1358" FT /product="Putative TetR-family transcriptional regulator" FT /note="Similar to Streptomyces coelicolor putative TetR FT family transcriptional regulator SCF6.16 SWALL:Q9RJL5 FT (EMBL:AL121849) (194 aa) fasta scores: E(): 6.8e-06, 25.53% FT id in 188 aa, and to Rhizobium loti probable transcription FT regulator MLL1924 SWALL:Q98JI8 (EMBL:AP002998) (205 aa) FT fasta scores: E(): 1.1e-05, 25.77% id in 194 aa" FT /protein_id="CAE49886.1" FT /translation="MRTDALRRRNSIISAGSALLIQAGTHMTVESVAERAKVGIATLYR FT NFPTREHLLQACIGNIADNGIEQLNSIANCPPRSSTEAKQQLITLISLISTIGLNIVIP FT AIIQPPESSLAPEFIDARRTLMKLMRTIDSNLRATGLIHPSISILDFYTGIIALCAPPH FT FSATDTPTPTTEHLIDIFIAGCKTGVAKATKNS" FT misc_feature 1376471..1376566 FT /note="Signal peptide predicted for DIP1358 by SignalP 2.0 FT HMM (Signal peptide probability 0.895) with cleavage site FT probability 0.400 between residues 32 and 33" FT misc_feature 1376504..1376545 FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT misc_feature 1376504..1376641 FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family" FT misc_feature 1376549..1376614 FT /note="Predicted helix-turn-helix motif with score 1291 FT (+3.58 SD) at aa 27-48, sequence MTVESVAERAKVGIATLYRNFP" FT misc_feature 1376564..1376635 FT /note="FPrintScan hit to PR00455, TetR bacterial regulatory FT protein HTH signature" FT misc_feature 1376729..1376797 FT /note="1 probable transmembrane helix predicted for DIP1358 FT by TMHMM2.0" FT CDS 1377106..1378494 FT /transl_table=11 FT /gene="sdaB" FT /gene_synonym="PA5379" FT /locus_tag="DIP1359" FT /product="L-serine dehydratase" FT /note="Similar to Pseudomonas aeruginosa L-serine FT dehydratase SdaB or PA5379 SWALL:Q9HTI5 (EMBL:AE004950) FT (458 aa) fasta scores: E(): 3.5e-84, 53.99% id in 463 aa, FT and to Escherichia coli L-serine dehydratase 1 SdaA or FT B1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta FT scores: E(): 3e-70, 49.24% id in 461 aa" FT /protein_id="CAE49887.1" FT /translation="MSISVTDLFSIGIGPSSSHTVGPLRAAEAFLSANNCPDDSEIAIT FT LHGSLAATGIGHGTDRAAILGLAGYTPITLTPDVKPVFGSAIPTQGTVSGPRGEVRYRL FT IFDPVPLPEHPNAMTFVAYGPDGNRIGTPAIYYSIGGGFIATADTMREQKTPESAVKSA FT NENLMPYPFTTGDELLYQCQSNALSIPQLMEANETAIHGSILPVNDHLDSVWATMQECV FT NQGLSTWGILPGGLEVERRAPQLFQHLTDGPVDTDDALRAMEWVNLFALAVNEENAAGG FT RVVTAPTNGAAGIVPAVLQYAEKFVPQFTETSHRDFLLTAAAIGIIIKYNASISGAEVG FT CQGEVGSASSMAAAGLCQVLNGTPRQVEHAAEIALEHNLGLTCDPVGGLVQIPCIERNA FT IGAVKSINAARLSLIGSGKHRVRLDDAVLTMAETGRDMLTKYKETSTGGLAIRLGLPVS FT ITEC" FT CDS complement(1378566..1379837) FT /transl_table=11 FT /gene="hisS" FT /locus_tag="DIP1360" FT /product="histidyl-tRNA synthetase" FT /EC_number="6.1.1.21" FT /note="Similar to Mycobacterium tuberculosis histidyl-tRNA FT synthetase HisS or Rv2580c or MT2657 or MTCY227.21 FT SWALL:SYH_MYCTU (SWALL:Q50641) (423 aa) fasta scores: E(): FT 1.6e-112, 70.4% id in 419 aa, and to Bacillus subtilis FT histidyl-tRNA synthetase HisS SWALL:SYH_BACSU FT (SWALL:O32039) (424 aa) fasta scores: E(): 3.8e-61, 45.63% FT id in 412 aa" FT /protein_id="CAE49888.1" FT /translation="MSKKKLQTIQAPKGVPDYIPPVSPEFLGVRDTFAHQAHLAGYEHI FT ELPIFEDTTLFARGVGESTDVVTKEMYTFADRGDRSVTLRPEGTAGVMRAVIEHNLDRG FT QLPVKLNYYGPFFRYERPQAGRYRQLQQVGVEAIGVDDPALDAEVIALADRSLKVIGLT FT GYRLELTSLGDHTCRPQYREKLQEFLFKLPLDEETRHRAEINPLRVLDDKRPEIQEMTV FT DAPLMLDNLSDSSREHFELVTGMLDDLNVAYVVNPRMVRGLDYYTKTTFEFVHDGLGAQ FT SGIGGGGRYDGLMAQLGGQELSGIGYALGVDRCLLALEAEQKRVTDGSRVNVFGVAMGS FT AAKREMVRIIDALRSAGISADMAYGDRGLKGAMKGADRAGARFALVLGDRELENNCVAV FT KDLAQQGQRDVSLDNLILEIQSAL" FT misc_feature complement(1378572..1378862) FT /note="HMMPfam hit to PF03129," FT misc_feature complement(1379346..1379798) FT /note="HMMPfam hit to PF00587, tRNA synthetase class II (G, FT H, P, S and T)" FT CDS complement(1379878..1380534) FT /transl_table=11 FT /locus_tag="DIP1361" FT /product="Conserved hypothetical protein" FT /note="Similar to Streptomyces coelicolor possible FT hydrolase SC9C5.33c SWALL:Q9KXP1 (EMBL:AL357523) (235 aa) FT fasta scores: E(): 6.5e-25, 40.35% id in 223 aa, and to FT Escherichia coli hypothetical protein YcbL or B0927 FT SWALL:YCBL_ECOLI (SWALL:P75849) (215 aa) fasta scores: E(): FT 3.7e-23, 36.79% id in 212 aa" FT /protein_id="CAE49889.1" FT /translation="MNHMEILSFPAGPYQTNCYVVLSEESEGRRYASVIDPGLRAKELI FT DQYCEENRVEVVQVLLTHGHIDHCRDAAALANGWGVALQIHRYDEFFLDKGNGMSEDSR FT LLFHADAMNLPDSVSYLGDGDEVELGGQRFVVRHAPGHSPGCVLFVGKDFCFSGDVLFK FT GSIGRTDLAHSDPHAMSNSIKSVVLGLEDSLTILPGHGPATTMRAEKASNPYLRV" FT misc_feature complement(1379935..1380504) FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily" FT CDS complement(1380544..1381041) FT /transl_table=11 FT /gene="tpx" FT /locus_tag="DIP1362" FT /product="thiol peroxidase" FT /EC_number="1.11.1.-" FT /note="Similar to Escherichia coli thiol peroxidase Tpx or FT B1324 or Z2452 or ECS1903 SWALL:TPX_ECOLI (SWALL:P37901) FT (167 aa) fasta scores: E(): 5.8e-35, 61.11% id in 162 aa, FT and to Pseudomonas aeruginosa probable thiol peroxidase Tpx FT or PA2532 SWALL:TPX_PSEAE (SWALL:P57668) (165 aa) fasta FT scores: E(): 4.8e-32, 55.75% id in 165 aa" FT /protein_id="CAE49890.1" FT /translation="MAITHFQESAVETSGSLPQVGQALPPFLLVDADLTDFDAERFAGK FT KIILNIFPSIDTGVCAQSVRHFNKEAADLADTVVICASADLPFAHSRFCAAEGLDNVIT FT GSSFRSSFGQDYGVVLEGSPLKGLLARAVIVADEQGTVVHSQLVDEITTEPDYAAALAS FT IK" FT misc_feature complement(1380559..1380984) FT /note="HMMPfam hit to PF00578, AhpC/TSA family" FT misc_feature complement(1380760..1380795) FT /note="ScanRegExp hit to PS01265, Tpx family signature." FT CDS 1381185..1382027 FT /transl_table=11 FT /locus_tag="DIP1363" FT /product="Putative isomerase" FT /note="Similar to Mycobacterium tuberculosis probable FT peptidyl-prolyl cis-trans isomerase B PpiB or Ppi or Rv2582 FT or MT2659 or MTCY227.19c SWALL:PPIB_MYCTU (SWALL:Q50639) FT (308 aa) fasta scores: E(): 5.5e-37, 46.23% id in 292 aa, FT and to Streptomyces coelicolor putative peptidyl-prolyl FT cis-trans isomerase SC9C5.34 SWALL:Q9KXP0 (EMBL:AL357523) FT (277 aa) fasta scores: E(): 3.5e-26, 37.5% id in 288 aa" FT /protein_id="CAE49891.1" FT /translation="MGTNKERRESAMRSLEKEIKSRDRAEKTKPLGVVAAAAVAVLAIV FT GGIYWANSSDDSAQTQASDQATPTTEESNFTPLAMKRAKALGDTVTCTYNDAGNASKDV FT SKPKTESVSAKGTTTVSLDTNKGKIDLELDHAASPCTVNAIEHLAKQKYYDDTVCHRLT FT TSGIYVLQCGDPSGKGSGGPGFQFDNEYPTDEASDKQTPVVYPRGSIAMANAGEGTNGS FT QFFLNYKDSPLPPAYTYFGKISDAGLKTLDKIAEAGVKDGGTDGAPAEEVKIRTAAVS" FT misc_feature 1381185..1381358 FT /note="Signal peptide predicted for DIP1363 by SignalP 2.0 FT HMM (Signal peptide probability 0.633) with cleavage site FT probability 0.451 between residues 58 and 59" FT misc_feature 1381272..1381340 FT /note="1 probable transmembrane helix predicted for DIP1363 FT by TMHMM2.0" FT misc_feature 1381539..1382006 FT /note="HMMPfam hit to PF00160, Cyclophilin type FT peptidyl-prolyl cis-trans isomerase" FT misc_feature 1381563..1382021 FT /note="ProfileScan hit to PS50072, Cyclophilin-type FT peptidyl-prolyl cis-trans isomerase profile." FT CDS 1382185..1382466 FT /transl_table=11 FT /locus_tag="DIP1364" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49892.1" FT /translation="MKLFSRKAIVAATTAVAISAGSLSAPAMADEHSDMSSAISELSDN FT NQSNGSKKDKTKETIDKVKSVLSIISTVVAILGALFPLASQILKKFGI" FT misc_feature 1382185..1382271 FT /note="Signal peptide predicted for DIP1364 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.736 between residues 29 and 30" FT misc_feature 1382380..1382448 FT /note="1 probable transmembrane helix predicted for DIP1364 FT by TMHMM2.0" FT CDS 1382517..1382657 FT /transl_table=11 FT /locus_tag="DIP1365" FT /product="Hypothetical protein" FT /note="Doubtful CDS. No strong consensus RBS usptream. No FT significant database matches" FT /protein_id="CAE49893.1" FT /translation="MSFGVSRGDTLCLSEGSFSDSDVVLVFGWDSLVVEDWKSGFLGRP FT A" FT repeat_region 1382643..1382679 FT /note="Possible inverted repeat" FT CDS 1382700..1384079 FT /transl_table=11 FT /locus_tag="DIP1366" FT /product="Putative transposase" FT /note="Similar to, although shorter than Escherichia coli FT possible transposase of IS1353 YahA SWALL:Q9WTH9 FT (EMBL:AP000342) (514 aa) fasta scores: E(): 1.4e-62, 41.59% FT id in 464 aa, and similar in its C-terminal region to FT Escherichia coli putative transposase InsK for insertion FT sequence element IS150 InsK or B3558 SWALL:INSK_ECOLI FT (SWALL:P19769) (283 aa) fasta scores: E(): 1.4e-35, 38.98% FT id in 277 aa" FT /protein_id="CAE49894.1" FT /translation="MNRSYTNTQKRTALRVYKRTQSVTKTVRELGYPGRWTLYKWLREP FT KTPPQPRKQAKTLTHYPYEVKLRAVELFHNGWRPADIAQECCLHTHASVYAWAQRYREE FT GQWGLMSKKERAGHGRIPTKAALEKSLPDNPTQLKQQMATLLVEKAVLEKELEIIKKDV FT SVIPGQLSNKHKTDVVDALRSTFPLAMLLAASGLAASSFYYHLKKRRMPDKHAAIRSMV FT HRISSDSHNTYGYRRIWWQLRHLGITISEKVVRRLMREEAITVRFPKRKVKYSSYQGEI FT SPAPPNLVNRCFHATAANTLWLTDISVFAVNEGRVYLSVIIDCFDGKVVAAKTSVNPTM FT ELAESTLQAAIDAEGLPPDGSLVIHSDRGVHYRGRSWHSLTAKYGIVRSMSKKGCSPDN FT AACEGFFGRMKNEMYYGKRWQTIQELDDAIAAYIEFYNNHRIKVSLNGMSIARYRMAAV FT A" FT misc_feature 1383243..1383311 FT /note="1 probable transmembrane helix predicted for DIP1366 FT by TMHMM2.0" FT misc_feature 1383579..1384061 FT /note="HMMPfam hit to PF00665, Integrase core domain" FT CDS complement(1384085..1384411) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1367" FT /product="Putative transposase (partial)" FT /note="Pseudogene/partial. Similar to parts of FT Corynebacterium jeikeium transposase SWALL:Q9AG97 FT (EMBL:AF338705) (392 aa) fasta scores: E(): 7e-11, 45.91% FT id in 98 aa. Note: Lacks stop codon" FT repeat_region 1384101..1384137 FT /note="Possible inverted repeat" FT CDS complement(1384750..1387029) FT /transl_table=11 FT /gene="relA" FT /gene_synonym="rel" FT /locus_tag="DIP1368" FT /product="GTP pyrophosphokinase" FT /EC_number="2.7.6.5" FT /note="Similar to Corynebacterium glutamicum GTP FT pyrophosphokinase RelA or Rel SWALL:RELA_CORGL FT (SWALL:O87331) (760 aa) fasta scores: E(): 0, 86.05% id in FT 760 aa, and to Escherichia coli GTP pyrophosphokinase RelA FT or B2784 or Z4099 or ECS3644 SWALL:RELA_ECOLI FT (SWALL:P11585) (744 aa) fasta scores: E(): 4.1e-97, 36.54% FT id in 684 aa, and to Streptomyces coelicolor GTP FT pyrophosphokinase RelA or SCL2.03c SWALL:RELA_STRCO FT (SWALL:P52560) (847 aa) fasta scores: E(): 7.3e-90, 58.33% FT id in 768 aa" FT /protein_id="CAE49898.1" FT /translation="MTQDKKTAKQSNSMRSMSARLARSLTGNRVRVNSVLEPMLAIHRE FT FHPKADAEVLNRAYATAERLHDGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLH FT DTVEDTDYSLEDLTADFGAEVARLVDGVTKLDKVALGAAAEAETIRKMIVAMSQDPRVL FT VIKVADRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYP FT KKYDEVVRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVMGRPKHYWSIYQKMIVRG FT KDFDEIFDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTV FT MGDGGKPLEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQK FT EAADPNEFLDSLRYDLTSKQIFVFTPKGDVVNLPVDSTPVDFAYAVHTEVGHRCIGAKI FT NGKLVALESKLKSGDRVEIFTSKDQNAGPSRDWQDFVVSPRAKAKIRQWFAKERREEYL FT EVGRDALATEVQRGGLPMHRLFTAQSMKQVATELHYPDVDALYTAIGSGSISAAHVANR FT LIAAFGDTEDAENTLVSRTPFSELVSSKSQVTDKNGILVEGSPDVMAKLAKCCMPVPGD FT EIFGFVTRGGGVSVHRTDCTNADSLRNEPERLINVQWASEGGSVFAATLQLEALDREGL FT LMDLTRVINEQRVQVVAMSSHASDDHVATVRFTFSVSDTKQLGSLMTQLRNTEAVFDVY FT RVTSGG" FT misc_feature complement(1384765..1384986) FT /note="HMMPfam hit to PF01842, ACT domain" FT misc_feature complement(1385593..1385784) FT /note="HMMPfam hit to PF02824, TGS domain" FT misc_feature complement(1386481..1386813) FT /note="HMMSmart hit to SM00471, Metal dependent FT phosphohydrolases with conserved 'HD' motif." FT CDS complement(1387088..1387642) FT /transl_table=11 FT /gene="apt" FT /locus_tag="DIP1369" FT /product="adenine phosphoribosyltransferase" FT /EC_number="2.4.2.7" FT /note="Similar to Corynebacterium glutamicum adenine FT phosphoribosyltransferase Apt SWALL:APT_CORGL FT (SWALL:O87330) (185 aa) fasta scores: E(): 4.9e-42, 66.27% FT id in 172 aa, and to Escherichia coli adenine FT phosphoribosyltransferase Apt or B0469 SWALL:APT_ECOLI FT (SWALL:P07672) (183 aa) fasta scores: E(): 5.7e-19, 40.85% FT id in 164 aa" FT /protein_id="CAE49900.1" FT /translation="MTVPLYADAREAIACKTRFVPDFPVPGVIFEDLTPVLADAAAFSL FT IVDELAKNAMRLGADFIGGLDARGFLLGSAVAYKAGTGILAIRKKGKLPPPVHSEEYSL FT EYGTAALELPAEGLELEDKKVVLVDDVLATGGTLDAARKLIEACGATVSGYAVVLEVDG FT LGGRERLNDAPLVVINESATA" FT misc_feature complement(1387091..1387561) FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain" FT misc_feature complement(1387232..1387270) FT /note="ScanRegExp hit to PS00103, Purine/pyrimidine FT phosphoribosyl transferases signature." FT CDS complement(1387698..1389449) FT /transl_table=11 FT /locus_tag="DIP1370" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum FT dipeptide-binding protein DciaE SWALL:O87329 FT (EMBL:AF038651) (502 aa) fasta scores: E(): 4e-83, 48.61% FT id in 434 aa, and to Mycobacterium tuberculosis FT hypothetical lipoprotein Rv2585c precursor or MT2662 or FT MTCY227.16 SWALL:YP85_MYCTU (SWALL:Q50636) (557 aa) fasta FT scores: E(): 7.1e-30, 29.09% id in 574 aa" FT /protein_id="CAE49901.1" FT /translation="MGCGQLDRVDSILVGMSYYNFPSPQGIGNVLVGKAKQTVRIRIPS FT TNLRKEVVRVGGLLSVSVMAVALSSCSAHPESSLSKSNQLGYAVNDRLVTTNAGSTEGA FT STNAQLLAGRLYPAPYVSGPKGQLIPNLSMASAQVLPGINQKIVYTISPDAVYSDGEAV FT TCDDYLLAFTAGTYDYVFDSYMPLMKQIDKVECKPRDREVTVTLKENFGPRWRQLFPAG FT VILPAHAIARKMGVTLEDLNTVLQSRDVDALQPIAEVWNRGFSLDQFDPDLQVSSGPYK FT VDRVGDRGEVYLTRNPHYGGQPAEIESVVVWPKGANLKELKDTGSLEIAEVTSSKEIDW FT LDRNDSTNSFDVQAQSGVLTEELLLANAGVFATRENRQAFASCIDQSSIASESSELSGV FT EVAPVTARTIRANDPMAGHVKDLTEAHLHSDVEQARRLAGQTIAIGYEGPDARMEAIVA FT NIRRSCEPAGIIVVDAHQEGSGIRDLSRSFTTDHGYQFDKIGTIDVVLKALDPATEFES FT VATTSNNIAATRQAELSTWDVVPSIPLASQPRVFVVDRRVSNVVLNTDLAGIGWNMDRW FT FFSKNSK" FT stem_loop complement(1389451..1389503) FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT CDS complement(1389519..1390631) FT /transl_table=11 FT /gene="secF" FT /locus_tag="DIP1371" FT /product="Putative protein export membrane protein" FT /note="Similar to Corynebacterium glutamicum SecF FT SWALL:Q9AE06 (EMBL:AF038651) (403 aa) fasta scores: E(): FT 4.4e-84, 62.14% id in 383 aa, and to Escherichia coli FT protein-export membrane protein SecF or B0409 or Z0508 or FT ECS0460 SWALL:SECF_ECOLI (SWALL:P19674) (323 aa) fasta FT scores: E(): 1.7e-11, 25.14% id in 338 aa" FT /protein_id="CAE49902.1" FT /translation="MSGNSVLSKLYTGDGGLDFVGRRRTWYRTTLIIVAICFIAIAVRG FT FSLGIDFVGGTKMNMPAAQLETSEVADTFKDATGIEPELVQIVGSGDTRILEINSERLS FT EDQISQARVALFEKYQPVGSQGQPTPDAIGDSTVSESWGSTITQRMLISMFVFLAAVFV FT YITVRLEKEMAVAAIVALLVDLIVISGVYALVGFEVSPATIIGLLTVLAFSLYDTVIVF FT DKVRENTAGYLGNRTRTYAEHANLAVNQTVMRSISTTIISALPIIALIVIAVWLMGVGT FT LKDLALVQLIGVIEGTFSSVFLATPILVSLKNRSKKTAEHNRQVEMHRCGAEAQDDSAP FT EQSAESTQKRTVSGPQVTTSTGASWRPDRG" FT misc_feature complement(1389690..1390526) FT /note="HMMPfam hit to PF02355, Protein export membrane FT protein" FT misc_feature complement(order(1389705..1389770,1389786..1389851, FT 1389966..1390031,1390044..1390109,1390131..1390196, FT 1390473..1390538)) FT /note="6 probable transmembrane helices predicted for FT DIP1371 by TMHMM2.0" FT CDS complement(1390632..1392410) FT /transl_table=11 FT /gene="secD" FT /locus_tag="DIP1372" FT /product="Putative protein export membrane protein" FT /note="Similar to Corynebacterium glutamicum SecD FT SWALL:Q9AE07 (EMBL:AF038651) (637 aa) fasta scores: E(): FT 1.2e-139, 67.52% id in 585 aa, and to Rhodobacter FT capsulatus protein-export membrane protein SecD FT SWALL:SECD_RHOCA (SWALL:O33517) (554 aa) fasta scores: E(): FT 1e-12, 27.64% id in 539 aa" FT /protein_id="CAE49903.1" FT /translation="MPSQTKKVASNSRSWPFKSLFGFTVLIAIIYALVFATADHSARPK FT LGIDLQGGTRVTLVPQGQNPTEDQLAQAKSILENRVNGMGVSGASVVSDGNTLVITVPG FT EDTTQARALGQTSQLLFRPVAKPDAPDTTKLLDAMKEMANRWVEVGVLTPQEANDALSN FT TAKALAQSEGKKPEDAKAPTVTAKEPKEPANSIESEQLRNKVLEVMKKDRQSTDATTQL FT SASSLLKCDDTPDPLQGTDDPTKPLVACDPSSGQVYVLSPAPLLQGETDQANGKRLTGN FT EIDTNRPITGGLNPQTGQMEIGFSFKSDNGDQGSATWAKLTQEYLQKQVAITLDSKIIS FT APVIQSATPVGSATAITGSFSQKEAQDLANNLKYGALPLSFAGENGETGGTTTTVPASL FT GVASLKAGLIAGLVGLILVALYSLINYRFFGLISMFSLVASFALVFGALVLLGRWIGYS FT LDLAGIAGLIIGIGTTADSFVVLYERIKDEVRDGRSFRSSVPRGWERARQTIITGNAVT FT LIGAVIIYILAVGEVKGFAFTLGLTTIFDIVVTFLVTAPLVVLASRKPWTSSGAANGMG FT KIISMHHGANAAKGEE" FT misc_feature complement(1390719..1391543) FT /note="HMMPfam hit to PF02355, Protein export membrane FT protein" FT misc_feature complement(order(1390728..1390793,1390824..1390880, FT 1390962..1391027,1391058..1391123,1391139..1391192, FT 1392285..1392350)) FT /note="6 probable transmembrane helices predicted for FT DIP1372 by TMHMM2.0" FT misc_feature complement(1392297..1392410) FT /note="Signal peptide predicted for DIP1372 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.652 between residues 38 and 39" FT CDS complement(1392415..1392600) FT /transl_table=11 FT /locus_tag="DIP1373" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49904.1" FT /translation="MAKRIPLNLNDFKVCSSVDSASVAYHSQEPKLLFDRVHFRIDGKQ FT READGGVLLDHHLHRS" FT CDS complement(1392641..1392934) FT /transl_table=11 FT /locus_tag="DIP1374" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum hypothetical FT 13.5 kDa protein SWALL:Q9AE08 (EMBL:AF038651) (121 aa) FT fasta scores: E(): 7.2e-10, 34.83% id in 89 aa, and to FT Mycobacterium tuberculosis hypothetical 13.0 kDa protein FT Rv2588c precursor or MT2665 or MTCY227.13 SWALL:YP88_MYCTU FT (SWALL:Q50633) (115 aa) fasta scores: E(): 5.9e-05, 37.77% FT id in 90 aa" FT /protein_id="CAE49905.1" FT /translation="MSMTSTLLLYVALVVVFVLPSLLIRRRQKQHLDRLKNLQESMMIG FT QRVITTAGVHAVIKGIAENTVDLEIAPNILVTFEKSAVISIEDNKSNSELEA" FT misc_feature complement(1392674..1392922) FT /note="HMMPfam hit to PF02699, Uncharacterized secreted FT proteins, YajC family COG1862" FT misc_feature complement(1392857..1392934) FT /note="Signal peptide predicted for DIP1374 by SignalP 2.0 FT HMM (Signal peptide probability 0.601) with cleavage site FT probability 0.204 between residues 26 and 27" FT misc_feature complement(1392863..1392919) FT /note="1 probable transmembrane helix predicted for DIP1374 FT by TMHMM2.0" FT CDS complement(1392938..1394026) FT /transl_table=11 FT /gene="ruvB" FT /locus_tag="DIP1375" FT /product="holliday junction DNA-helicase" FT /note="Similar to Corynebacterium glutamicum holliday FT junction DNA-helicase RuvB SWALL:Q9AE09 (EMBL:AF038651) FT (363 aa) fasta scores: E(): 1.6e-102, 81.16% id in 361 aa, FT and to Escherichia coli holliday junction DNA helicase RuvB FT or B1860 or Z2912 or ECS2570 SWALL:RUVB_ECOLI FT (SWALL:P08577) (336 aa) fasta scores: E(): 1e-62, 56.11% id FT in 319 aa" FT /protein_id="CAE49906.1" FT /translation="MANIEKTEFHVPAPVSAAGNQKSSLGNADVDARLQSNEGEVETSL FT RPRSLDEFIGQPKVRDQLNLVLSGAKSRGVAPDHVLLSGPPGLGKTTMAMIIAYELGTS FT LRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRMARPAEEMLYMAMEDFRIDVIVGK FT GPGATSIPLELAPFTLVGATTRSGMLTGPLRDRFGFTAQMEFYEVEDLTKVVVRAAAVL FT GVSIDHDAAVEIASRSRGTPRIANRLLRRVRDFAEVNADGHINLAAAQAALVVFDVDEM FT GLDRLDRAVLEALIKGHGGGPVGINTLALAVGEEPSTVEEVCEPYLVRAGMVTRTGRGR FT VATATAWRHLGLEPPEGIIGSL" FT misc_feature complement(1393253..1393792) FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellular activities (AAA)" FT misc_feature complement(1393400..1393801) FT /note="HMMSmart hit to SM00382, ATPases associated with a FT variety of cellular activities" FT misc_feature complement(1393754..1393777) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1394044..1394655) FT /transl_table=11 FT /gene="ruvA" FT /locus_tag="DIP1376" FT /product="holliday junction DNA-helicase" FT /note="Similar to Corynebacterium glutamicum holliday FT junction DNA-helicase RuvA SWALL:Q9AE10 (EMBL:AF038651) FT (206 aa) fasta scores: E(): 1.2e-36, 56.79% id in 206 aa, FT and to Escherichia coli holliday junction DNA helicase RuvA FT or B1861 or Z2913 or ECS2571 SWALL:RUVA_ECOLI FT (SWALL:P08576) (203 aa) fasta scores: E(): 1.9e-16, 39.51% FT id in 205 aa" FT /protein_id="CAE49907.1" FT /translation="MIVSLRGTVESIGLGSAVIECNGVGYEVLAAPTTLGRLTRGEQAR FT VLTTMVVREESQTLYGFTDDASRRMFVLLQSVSGLGPKLALAAQSVFTTEDIARHIAGG FT DAKALQKIPGVGKRMAERMIVDLKDKVVGFNDGIPAAAQPQLSIAVDQAVQEQVLEALV FT GLGFSEKIALPVLSRVLRDSPELSKSQALRAALSELGTKN" FT misc_feature complement(1394068..1394655) FT /note="BlastProDom hit to PD006268, PD006268" FT misc_feature complement(1394248..1394466) FT /note="HMMPfam hit to PF02904, RuvA central domain II" FT misc_feature complement(1394470..1394652) FT /note="HMMPfam hit to PF01330, RuvA N terminal domain" FT CDS complement(1394694..1395185) FT /transl_table=11 FT /gene="ruvC" FT /locus_tag="DIP1377" FT /product="crossover junction endodeoxyribonuclease" FT /note="Highly similar to Corynebacterium glutamicum FT crossover junction endodeoxyribonuclease RuvC SWALL:Q9AE11 FT (EMBL:AF038651) (221 aa) fasta scores: E(): 1.8e-52, 83.95% FT id in 162 aa, and to Escherichia coli crossover junction FT endodeoxyribonuclease RuvC or B1863 or Z2915 or ECS2573 FT SWALL:RUVC_ECOLI (SWALL:P24239) (172 aa) fasta scores: E(): FT 1.8e-13, 36.66% id in 150 aa" FT /protein_id="CAE49908.1" FT /translation="MGIDPGLTRCGLSVVQAGKGRSVIPVAVGVVRTPPHAELSQRLLE FT LSEAVNSWIDEYQPDVVAIERIFERGNVSTVMNTAHGVGVLVLAAAQRGLPVHMYTPSE FT VKKAISGNGRADKKQMTAMITRILGLVEAPKPADAADALALAVCHCWRAPMLAIHNSQR FT " FT misc_feature complement(1394730..1395185) FT /note="BlastProDom hit to PD008333, PD008333" FT misc_feature complement(1394739..1394777) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(1394739..1395185) FT /note="HMMPfam hit to PF02075, Crossover junction FT endodeoxyribonuclease RuvC" FT misc_feature complement(1394814..1394873) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(1394895..1394945) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(1394961..1395011) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT misc_feature complement(1395144..1395185) FT /note="FPrintScan hit to PR00696, Crossover junction FT endodeoxyribonuclease RUVC signature" FT CDS complement(1395368..1396120) FT /transl_table=11 FT /gene="yfcA" FT /locus_tag="DIP1378" FT /product="Conserved hypothetical protein" FT /note="Highly similar to Corynebacterium glutamicum FT hypothetical structural protein YfcA SWALL:Q9AE12 FT (EMBL:AF038651) (251 aa) fasta scores: E(): 2.7e-76, 83.53% FT id in 249 aa, and to Escherichia coli protein YebC in 249 FT aa" FT /protein_id="CAE49909.1" FT /translation="MSGHSKWATTKHKKAANDAKRGKEFAKLIKNIEVAARTGGGDPSA FT NPTLDDMIKKAKKASVPNDNIERARKRGSGEEAGGADWQTIMYEGYGPNGVAVLIECLT FT DNRNRAASEVRTAMSKNGGNMAENGAVSYMFKRRGFVLVNKGELTEDDVLMAVLDAGAE FT EVSDAGDKFEILSAPGDVAAIRDALAEAEIEVEDSDSDFRADVLVPLEANDARKIFRLI FT DALEESDDVQNVYTNMDLSDEVLAELEA" FT misc_feature complement(1395404..1396105) FT /note="BlastProDom hit to PD004323, PD004323" FT misc_feature complement(1395404..1396108) FT /note="HMMPfam hit to PF01709, Domain of unknown function FT DUF28" FT CDS complement(1396358..1397212) FT /transl_table=11 FT /gene="tesB" FT /locus_tag="DIP1379" FT /product="Putative acyl-CoA thioesterase II" FT /note="Similar to Mycobacterium tuberculosis TesB or TesB2 FT or Rv2605c or MTCY01A10.28 SWALL:O06209 (EMBL:Z95387) (281 FT aa) fasta scores: E(): 1.9e-49, 50.17% id in 279 aa, and to FT Escherichia coli acyl-CoA thioesterase II TesB or B0452 or FT Z0564 or ECS0506 SWALL:TESB_ECOLI (SWALL:P23911) (285 aa) FT fasta scores: E(): 3e-20, 37.27% id in 279 aa" FT /protein_id="CAE49910.1" FT /translation="MGRIFDVLDVETLDANLFRGPVVESALARTFGGQVAAQALVCATQ FT TVNTEDFIVHSLHGYFVSAGDSSKPTIFEVQRIRDGRSFISRHITALQNGRPIFGMQAS FT FHIRNDHGPEHSDLVRRVPPPEAVQIDRDGLPASSRALLDEWGDWDIRKIASEDFEKNP FT YTPSQQVVWFKSKEALPDDETFHICTLAYMSDMTLLHSSLVPHPEEPVKLASLDHAMWF FT LRPFRADEWLLYDQVSPSAHAGRALTQGKIFNLNGDLVAITTQEGLTRHLKPGEADIPF FT VSQ" FT misc_feature complement(1396394..1397209) FT /note="HMMPfam hit to PF02551, Acyl-CoA thioesterase" FT CDS 1397443..1398588 FT /transl_table=11 FT /locus_tag="DIP1380" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49911.1" FT /translation="MLDLRPTGDVNYYYVGIFGLSPGALQEYPAVGVWPIKALSWITGS FT EHAVFVVGFAVLCLLFDALFFGALLTVNQERFPGSRFAAVVWIIFGLATQHVFLLRLDI FT MCGVAVGLAALCYFVNPHRASALIAIATMMKLWPGILAAGLVGGFRNMSSWIRLAVFFT FT TSAVLVVIVYFVDGFDRLMSPLTYQTDRGIQIESIPGTWFMYKALGDPEHYSVYYATSK FT SFEVTGPNIETALMISSWAMLATVVFGVGWALVNFLFDRWNPETTLAWSIVMVLLVICT FT NKVLSPQYVLWISPLIVVAVAVRPRSWAVRLLAIMSIFITFFSWLVYPARYDDIISVPF FT DTSFTIYVLIARNLLYLVSLFVAVGWWVSINVEARSSTKMP" FT misc_feature order(1397476..1397544,1397587..1397655,1397731..1397799, FT 1397812..1397880,1397899..1397967,1398151..1398219, FT 1398253..1398321,1398364..1398423,1398484..1398552) FT /note="9 probable transmembrane helices predicted for FT DIP1380 by TMHMM2.0" FT misc_feature 1397575..1397607 FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT CDS 1398642..1399385 FT /transl_table=11 FT /locus_tag="DIP1381" FT /product="Putative biotin synthesis related protein" FT /note="Similar to Bacillus sphaericus FT 6-carboxyhexanoate--CoA ligase BioW SWALL:BIOW_BACSH FT (SWALL:P22822) (245 aa) fasta scores: E(): 1.5e-20, 34.71% FT id in 242 aa, and to Bacillus subtilis FT 6-carboxyhexanoate--CoA ligase BioW SWALL:BIOW_BACSU FT (SWALL:P53559) (259 aa) fasta scores: E(): 4.4e-16, 33.33% FT id in 252 aa. Note: There is a possible alternative start FT codon at residue 7" FT /protein_id="CAE49912.1" FT /translation="MLYASYMSYVSIKMHASSNGAHISGAETLVDESRAYEFLSSFYQR FT ANTHSKGKPEITTLTIRRIKDADIITIPALEVKCLPALHPSEAHRQVIEQLSNVVSPTI FT AQMALHTVLNARNMRGAILLCAHTGQRLDPYDPQRGVRASTFGVTPQESAGPTLNKSHF FT NEALVLASKVMSAPGIVAEICISDDPAYTTGYVTTENTYIRIPHMKDPYSPIGGRVFLL FT DTRVSTPEDTISYLEQKPVLITGVN" FT CDS 1399385..1400575 FT /transl_table=11 FT /locus_tag="DIP1382" FT /product="Putative aminotransferase (biotin synthesis FT related protein)" FT /note="Similar to Bacillus sphaericus FT 8-amino-7-oxononanoate synthase BioF SWALL:BIOF_BACSH FT (SWALL:P22806) (389 aa) fasta scores: E(): 8.9e-47, 40.95% FT id in 376 aa, and to Escherichia coli FT 8-amino-7-oxononanoate synthase BioF or B0776 FT SWALL:BIOF_ECOLI (SWALL:P12998) (384 aa) fasta scores: E(): FT 9.8e-39, 37.39% id in 353 aa" FT /protein_id="CAE49913.1" FT /translation="MSPSLDFYAHQRNVEWHERGLERTPAQFYSPQTPHAIIDNRPMLL FT FSSSDYLGLSEHPFLKNAAIQAISSLGTGSGGSRLTTGSSIHRSIEIHLAQFFGSPDAV FT FFASGYQANVTIISTLAGPHCTIYSDSLNHASIIDGCRLSKSQVKTFPTGDYEALDAAL FT AHCDTTNSLIITDAVFSMSGTIADLEQLRQVAARHGSWLLIDDAHGIGCLGNAGRGTAH FT LFPHAPTDFSQEVIVGTSSKALGGEGGFALCSEQVATLLRNQGRGYVFSTAPAPATMAT FT TDAALTVLEQEPDRIRRLQSNIAYFAQRSSNVVPFQKSGFFSPIISYTIGDENEALKSA FT QLLRDNGFFIPAIRYPTVSRGSAMLRITMTAMHSHHDIDQLADALNQLESHRLDNS" FT misc_feature 1399601..1400551 FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II" FT CDS complement(1400572..1401033) FT /transl_table=11 FT /locus_tag="DIP1383" FT /product="Putative secreted protein" FT /note="Similar to the N-terminal region of Mycobacterium FT tuberculosis CDC1551 MutT/NudIX family protein MT2684 FT SWALL:AAK47000 (EMBL:AE007101) (351 aa) fasta scores: E(): FT 1.2e-06, 42.2% id in 154 aa, and to Streptomyces coelicolor FT hypothetical 19.8 kDa protein SCL2.14c SWALL:Q9L285 FT (EMBL:AL137778) (180 aa) fasta scores: E(): 0.0099, 35.88% FT id in 170 aa" FT /protein_id="CAE49914.1" FT /translation="MTTILVAIVVCFITVFIAWAWSTAQRLNRLHIRTDSALQALQAAL FT DQRSAVLAALYPQHNALAQSAQKIQLDYETFSERSEKEKRVGACISFLGDAVPASLVEA FT EARVQLAFRFYNDAVADTRALRVRPLVRGLRLGGTARLPIFFELPNTHD" FT misc_feature complement(1400965..1401021) FT /note="1 probable transmembrane helix predicted for DIP1383 FT by TMHMM2.0" FT misc_feature complement(1400974..1401033) FT /note="Signal peptide predicted for DIP1383 by SignalP 2.0 FT HMM (Signal peptide probability 0.904) with cleavage site FT probability 0.765 between residues 20 and 21" FT CDS complement(1401045..1402136) FT /transl_table=11 FT /locus_tag="DIP1384" FT /product="Putative transferase (LPS related)" FT /note="Similar to Streptomyces coelicolor putative sugar FT transferase SCL2.15c SWALL:Q9L284 (EMBL:AL137778) (387 aa) FT fasta scores: E(): 3.5e-45, 49.06% id in 375 aa, and to FT Mycobacterium tuberculosis CDC1551 glycosyl transferase FT MT2685 SWALL:AAK47001 (EMBL:AE007101) (378 aa) fasta FT scores: E(): 9.2e-42, 47.89% id in 380 aa" FT /protein_id="CAE49915.1" FT /translation="MRIGIVCPYSFDAPGGVQAHVLDLAEKFISQGHHVEVLGPASEST FT QLPDFVTRGGASLPIPYNGSVARLSFGPSTFIRARDFINRGQFDVLHIHEPNSPSFSMA FT ALKVARGPIVATYHASSNRSLALKFALPFLRGQLEKIRGGIAVSEMARRWQVEMLGGDP FT ILIPNGVETSQFELDKKPLWSGRIPEIVFLGRLDEHRKGLDILLRAVDRLDHEVRVTVI FT GGGTHPPAPRIDFVGRVSDEEKAEILGRADIYVAPNRGGESFGIVLVEAMAAGCVVVAS FT DLEAFSAVCDAQSSQPSGILFRNGDADDLASTLRNVIENPKFGQELVTSGTQRAKEFDW FT DNVSKEIMRVYETVCDGTTVTAA" FT misc_feature complement(1401123..1401620) FT /note="HMMPfam hit to PF00534, Glycosyl transferases group FT 1" FT CDS complement(1402163..1403104) FT /transl_table=11 FT /locus_tag="DIP1385" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 35.4 FT kDa protein ML0453 or MLCl581.15c SWALL:O07148 FT (EMBL:Z96801) (320 aa) fasta scores: E(): 5.5e-52, 47.33% FT id in 300 aa, and to Streptomyces coelicolor putative FT acyltransferase SCL2.16c SWALL:Q9L283 (EMBL:AL137778) (311 FT aa) fasta scores: E(): 1.4e-37, 43.44% id in 290 aa" FT /protein_id="CAE49916.1" FT /translation="MKSTSMNTNKRFQNVNQWKLHASAAAYLAGWKVVRLLPEPVAYRL FT FSWAAVIASRRGRGMDQLRRNLTRVVGAESVDRALVKRSMQSYARYWCEAFRLSVIARD FT PDVIHRVDAHAVGVEQVNPHSPMIIVLPHSGNWDLIGMYFVKKVGTFTTVAERVKPESL FT FRAFVNYRRSLGFEVLPLTGSETSPYSVLLQRVREGRTVCLLGERDLTSHGVEVEFFGE FT TTRMPAGAVKLALDSGAPLHVAHTWFEGDDWGLSLSEPVEITDVKSGVQAIAQIMEKNI FT KAHPQDWHLLQPLWINDLDRRRYESGLQPKND" FT CDS complement(1403131..1403784) FT /transl_table=11 FT /locus_tag="DIP1386" FT /product="Putative phosphatidyltransferase" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT CDP-diacylglycerol--glycerol-3-phosphate FT 3-phosphatidyltransferase, putative MT2687 SWALL:AAK47003 FT (EMBL:AE007101) (217 aa) fasta scores: E(): 6.9e-34, 48.29% FT id in 205 aa, and to Mycobacterium smegmatis FT phosphatidylinositol synthase PgsA SWALL:Q9F7Y9 FT (EMBL:AF265558) (222 aa) fasta scores: E(): 8.7e-31, 47% id FT in 200 aa" FT /protein_id="CAE49917.1" FT /translation="MLSVHGRKPAAVIVEPVAKALIKIGFTPNSITIVGTAITIAIAVI FT LIPTDHLFAAAVLSGVFAAFDMVDGTMARMRGGGTKFGATLDASCDRITDGALFGAITW FT WLIFHHAASQMLVVASFVVLVCSQVISYVKARGEASGFTMNGGLVERPERLIVGLGGIG FT LAGLGVPFAVDVAIYLLAIGSIFTVGQRLYIASQSEIALEKTAAPAGAKEHPNF" FT misc_feature complement(1403191..1403619) FT /note="HMMPfam hit to PF01066, CDP-alcohol FT phosphatidyltransferase" FT misc_feature complement(order(1403254..1403319,1403407..1403472, FT 1403566..1403631,1403647..1403712)) FT /note="4 probable transmembrane helices predicted for FT DIP1386 by TMHMM2.0" FT misc_feature complement(1403491..1403616) FT /note="ProfileScan hit to PS50291, CDP-alcohol FT phosphatidyltransferases profile" FT misc_feature complement(1403512..1403580) FT /note="ScanRegExp hit to PS00379, CDP-alcohol FT phosphatidyltransferases signature." FT CDS complement(1403777..1404361) FT /transl_table=11 FT /locus_tag="DIP1387" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical protein FT ML0455 SWALL:Q9CCU0 (EMBL:AL583918) (206 aa) fasta scores: FT E(): 6.3e-43, 61.49% id in 174 aa, and to Mycobacterium FT leprae hypothetical 20.7 kDa protein MLCl581.17c FT SWALL:O07150 (EMBL:Z96801) (186 aa) fasta scores: E(): FT 4.1e-42, 62.13% id in 169 aa" FT /protein_id="CAE49918.1" FT /translation="MGSVPDNGETYVDQGIGVEDRLERLWAPYRMAYIKKDPVDDARGS FT TNPFVRIPELSDEDGLIVARGEYVYCLLNLFPYNSGHMMVVPYRQEPNLEDLTAEEISE FT LFAFGQAAIKVVKSVSRPDAINVGFNLGRASGGSVGEHLHMHIVPRWSGDANFMTVIDG FT TKVLPQLLRKTRSLLAQAWNDMDGIPGVAHA" FT misc_feature complement(1403891..1404232) FT /note="HMMPfam hit to PF01230, HIT family" FT stem_loop complement(1404477..1404521) FT /note="Score 54: 18/18 (100%) matches, 0 gaps" FT CDS complement(1404545..1406608) FT /transl_table=11 FT /gene="thrS" FT /locus_tag="DIP1388" FT /product="threonyl-tRNA synthetase" FT /EC_number="6.1.1.3" FT /note="Similar to Mycobacterium tuberculosis threonyl-tRNA FT synthetase ThrS or Rv2614c or MT2689 or MTCY1A10.20 FT SWALL:SYT_MYCTU (SWALL:O06200) (692 aa) fasta scores: E(): FT 2.1e-188, 67.06% id in 677 aa, and to Escherichia coli FT threonyl-tRNA synthetase ThrS or B1719 SWALL:SYT_ECOLI FT (SWALL:P00955) (642 aa) fasta scores: E(): 1e-50, 38.52% id FT in 649 aa" FT /protein_id="CAE49919.1" FT /translation="MAHLIEAAPNPHQPFVVTAGVAVGAAMRELELPNKGPEAIVCVKD FT SEGTLRDLSFVPEQDSKFTPVPANTEDGRTVIRHSCTHVLAQAVQAEFPGTKLGIGPAI FT ENGFYYDFDVAEPFTPEDLQKLEKRMKKIVKQGQKFERRIFASVAEAEEALKNEPYKLE FT LIRDKGNVDPGSDEATEIGAGDLTGYYNVNPRTGEVDWYDLCRGPHVPTTKYIPAFALT FT RSSAAYWRGDQSLAGLQRIYGTAWESKEALEEYQLMMAEAEKRDHRRLGAELDLFSFPD FT EIGSGFPVFHPNGGIVRLEMEEHSRRRHINAGYSFVNTPHITKGDLFKKSGHLDFYADG FT MFPPMQLDGEVDEEGNVVKQAQDYYAKPMNCPMHNLIFASRGRSYRELPLRLFEFGTVY FT RYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEQELTSVLDFIISLLRDYGLDDFYLELS FT TKDPNKFVGSDEIWEKSTSILQRVATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQ FT MSTVQLDFNLPERFNLEYTSSDGSKKRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLA FT PHQVIGIPVADSFSEHLEKVTGMLRDNGVRASVDTSDDRMQKKIRNHTTGKVPFMLLAG FT ARDVEANAVSFRFLDGTQINGVPVDKAIGVITQWISSRNNKQPSEETVKKLV" FT misc_feature complement(1404602..1404892) FT /note="HMMPfam hit to PF03129," FT misc_feature complement(1404857..1404895) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(1404923..1404952) FT /note="ScanRegExp hit to PS00339, Aminoacyl-transfer RNA FT synthetases class-II signature 2." FT misc_feature complement(1404935..1404976) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(1405019..1405105) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(1405253..1405753) FT /note="HMMPfam hit to PF00587, tRNA synthetase class II (G, FT H, P, S and T)" FT misc_feature complement(1405343..1405414) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT misc_feature complement(1405349..1405414) FT /note="ScanRegExp hit to PS00179, Aminoacyl-transfer RNA FT synthetases class-II signature 1." FT misc_feature complement(1405427..1405513) FT /note="FPrintScan hit to PR01047, Threonyl-tRNA synthetase FT signature" FT CDS complement(1406797..1408017) FT /transl_table=11 FT /locus_tag="DIP1389" FT /product="Putative secreted protein" FT /note="Similar to Yersinia pestis hypothetical protein FT YPO1856 SWALL:Q8ZF62 (EMBL:AJ414150) (434 aa) fasta scores: FT E(): 8.7e-30, 33.74% id in 406 aa, and to Escherichia coli FT hypothetical protein YcdB precursor or B1019 FT SWALL:YCDB_ECOLI (SWALL:P31545) (423 aa) fasta scores: E(): FT 2.4e-29, 32.22% id in 419 aa. Note: Contains a putative FT twin-arginine translocation (TAT) system recognition motif FT (RRGFLT) at the N-terminal region" FT /protein_id="CAE49920.1" FT /translation="MSRRGFLTGTAGVAAAGALSACTEPAHDADAVGVDQTVAQEIEPF FT DGIHQSGIATPAQSHLIVLGLNCRAGVDSAAVRRLLTLWTEDARELTQARNPVGSLEPE FT MTSSPSRLTVTAGAGARLFDILGKSEMKPAWLKDIPVFSKDRLDPRWGQTDLVLQICSD FT DPMTAAFAMRHMTRSGSDYAEVKWVQQGFLNARGTLQKGETPRNLFGQKDGTINPHTAE FT EFDKQVWIDNEDDSPRWMRGGTCMVVRRISMNLDTWERLDRQSREVAIGRDIVEGAPLS FT GGKEHDSADYEAVDEYGLPKIDARSHMALATPPSDLPNQRLLRRAYTYNETPMVGTDQL FT SNAGLVFCCFQKDPRKQFIPIQQRLDASDRLNEWIKHIGSAVYAIFPGTDQKKTEASIW FT GAALFDS" FT misc_feature complement(1407925..1408017) FT /note="Signal peptide predicted for DIP1389 by SignalP 2.0 FT HMM (Signal peptide probability 0.975) with cleavage site FT probability 0.441 between residues 48 and 49" FT misc_feature complement(1407994..1408011) FT /note="Potential twin-arginine recognition motif RRGFLT" FT CDS complement(1408111..1408725) FT /transl_table=11 FT /locus_tag="DIP1390" FT /product="Putative secreted protein" FT /note="Low similarity to Vibrio cholerae hypothetical FT protein VCA0037 SWALL:Q9KNC8 (EMBL:AE004347) (150 aa) fasta FT scores: E(): 9.6e-09, 34.09% id in 132 aa, and to Rhizobium FT loti MLL3326 protein SWALL:Q98GH4 (EMBL:AP003001) (179 aa) FT fasta scores: E(): 3.1e-05, 29.45% id in 146 aa" FT /protein_id="CAE49921.1" FT /translation="MSTSRRIKGAIAVFAMASIALTACSNSESDSEKKVDTASSAAAAA FT SETNSMSMGADSVMMMNPYVRSMEDGKSMTGIFGEIMNHSDKDVTVVGFSSSINAKMNQ FT LHEVVDGVMKEKEGGFVIPAGGTYTLEPGKDHMMLMGVDKPVAAGDTVSVTLELSDGTT FT VDVKDIPVRKLGAGDENYGADGAVHMDHGTSETMKHDHSHK" FT misc_feature complement(1408639..1408725) FT /note="Signal peptide predicted for DIP1390 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.461 between residues 29 and 30" FT CDS complement(1408732..1409376) FT /transl_table=11 FT /locus_tag="DIP1391" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49922.1" FT /translation="MQALNFNDFVPAIVVSISSDVSGEFVKGQCVRSTWQGVKFASIGA FT LTGLFLLQQPVVAHDVVISSNPQDGAKVTEFPTTVELTFSGIPKKDFNTVALSRKSDST FT VLYRGEPHLNGQVVSFTLPSNIEKQAGEYLIGFQITSSDGHSTKGRTTFTYVDPSQENG FT SSEVSAESELKPTTSEGLSSTVTFAAGGITLIALAIVSIFLVARRNSRKGK" FT misc_feature complement(1408759..1408824) FT /note="1 probable transmembrane helix predicted for DIP1391 FT by TMHMM2.0" FT tRNA complement(1409586..1409657) FT /gene="tRNA-Val" FT /product="transfer RNA-Val" FT /anticodon=(pos:1409623..1409625,aa:Val) FT /note="tRNA Val anticodon CAC, Cove score 81.63" FT tRNA 1409946..1410018 FT /gene="tRNA-Gly" FT /product="transfer RNA-Gly" FT /anticodon=(pos:1409979..1409981,aa:Gly) FT /note="tRNA Gly anticodon GCC, Cove score 71.96" FT tRNA 1410036..1410107 FT /gene="tRNA-Val" FT /product="transfer RNA-Val" FT /anticodon=(pos:1410068..1410070,aa:Val) FT /note="tRNA Val anticodon GAC, Cove score 71.57" FT tRNA 1410141..1410213 FT /gene="tRNA-Gly" FT /product="transfer RNA-Gly" FT /anticodon=(pos:1410174..1410176,aa:Gly) FT /note="tRNA Gly anticodon GCC, Cove score 71.96" FT tRNA 1410252..1410322 FT /gene="tRNA-Cys" FT /product="transfer RNA-Cys" FT /anticodon=(pos:1410284..1410286,aa:Cys) FT /note="tRNA Cys anticodon GCA, Cove score 58.71" FT tRNA 1410330..1410401 FT /gene="tRNA-Val" FT /product="transfer RNA-Val" FT /anticodon=(pos:1410362..1410364,aa:Val) FT /note="tRNA Val anticodon GAC, Cove score 71.57" FT tRNA 1410435..1410507 FT /gene="tRNA-Gly" FT /product="transfer RNA-Gly" FT /anticodon=(pos:1410468..1410470,aa:Gly) FT /note="tRNA Gly anticodon GCC, Cove score 71.96" FT CDS 1410549..1411358 FT /transl_table=11 FT /locus_tag="DIP1392" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae hypothetical 29.0 FT kDa protein ML1340 or MLC1351.23 TR:O05684 (EMBL:Z95117) FT (268 aa) fasta scores: E(): 1.4e-12, 30.97% id in 226 aa, FT and to Mycobacterium tuberculosis hypothetical 27.7 kDa FT protein CY441.40 Rv2671 or MT2745 or MTCY441.40 TR:AAK47060 FT (EMBL:Z80225) (239 aa) fasta scores: E(): 9.8e-12, 29.27% FT id in 222 aa" FT /protein_id="CAE49923.1" FT /translation="MLTDMQRDSASSSTVTTEQIVYGALPLTTINEPECRAIAITSING FT SATLSGVSGPMGDQTDADLLIQLRGWADAIVVGAETARKENYGPVVLPHGIKNQRQKLG FT RCGLPKLTLLSKSLYFDFSSELFSPDLPSELSPLVITQQPANNSEQWDQRLQKLIDVGV FT EVIVAPTSTNPLKIAFDALHARRLKKISIEGGPSVYRQALSLGIVDRLHLTIAPNIICP FT VESPLFGKISDDSFTTRLVLEMLSSSPNGLIFSRYKVIRDTLGNPTQ" FT misc_feature 1410654..1411280 FT /note="HMMPfam hit to PF01872, RibD C-terminal domain" FT CDS 1411416..1411826 FT /transl_table=11 FT /locus_tag="DIP1393" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT PilB-related protein MT2748 TR:AAK47063 (EMBL:AE007105) FT (136 aa) fasta scores: E(): 6.2e-39, 70.67% id in 133 aa, FT and to Streptomyces coelicolor putative oxidoreductase FT SC9B1.08 TR:Q9X828 (EMBL:AL049727) (135 aa) fasta scores: FT E(): 4.3e-33, 67.74% id in 124 aa" FT /protein_id="CAE49924.1" FT /translation="MTNFKLITDTEWRQRLSSEEYRVLREAGTEAPHTGEYTNTTTEGI FT YSCRACGTELFRSTEKFNSHCGWPSFFSPLAGDKVIERTDTSHGMVRTEVICANCESHL FT GHVFAGEGYDTPTDLRYCINSVCLTLIPAEES" FT misc_feature 1411434..1411766 FT /note="BlastProDom hit to PD004057, PD004057" FT misc_feature 1411440..1411814 FT /note="HMMPfam hit to PF01641, Domain of unknown function FT DUF25" FT CDS complement(1411905..1412609) FT /transl_table=11 FT /locus_tag="DIP1394" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2750 TR:AAK47065 FT (EMBL:AE007105) (231 aa) fasta scores: E(): 3e-55, 59.3% id FT in 231 aa, and to Streptomyces coelicolor hypothetical 28.1 FT kDa protein Sc1B5.02 TR:O69830 (EMBL:AL023517) (243 aa) FT fasta scores: E(): 5.5e-48, 54.7% id in 223 aa" FT /protein_id="CAE49925.1" FT /translation="MAEKLNFEELNSMQRYSQFAVFRAIPGALGSDRAEIVAQAQSFFD FT GLETAGKVEVRGIYDLAGCRAEADFMIWWIAEEFEEIQAAFARFRRETVLGQVSEVAWL FT GNSLHRPAEFNRSHLPSFIMGEIPGDWITVYPFVRSYDWYIMDPQKRRKILAEHGQAAR FT DFPDVRANTVPAFALGDYEWMLAFEAPRLDRIVDLMHKMRYTEARLHVREETPFFTGRR FT VSEVSELVNVLP" FT CDS 1412834..1413415 FT /transl_table=11 FT /locus_tag="DIP1395" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 22.6 kDa protein Rv2680 or MT2754 or MTV010.04 TR:O86317 FT (EMBL:Z96072) (210 aa) fasta scores: E(): 2.7e-38, 56.59% FT id in 182 aa, and to Streptomyces coelicolor hypothetical FT 24.7 kDa protein Sc1C3.1cC TR:O69860 (EMBL:AL023702) (238 FT aa) fasta scores: E(): 1.2e-22, 41.17% id in 187 aa" FT /protein_id="CAE49926.1" FT /translation="MPIIASESSHESIPQDFMDAVESMHKAQLRPEISLGTIRPPQRLA FT PFSHAVGLEVSGTLSDDSQGDAFGRLILLHDPTSDESWDGSMRLVAYIQADMDASVAND FT PLLPDVAWQWLTEALDKTHADHTNLGGTVTATASVRFGEIGGPPRAYQVEMRASWTATA FT IDLAPHVSAFAQVLANVAGLSPEGTTSISR" FT CDS 1413434..1414657 FT /transl_table=11 FT /locus_tag="DIP1396" FT /product="Putative ribonuclease" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT ribonuclease D, putative MT2755 TR:AAK47070 (EMBL:AE007105) FT (438 aa) fasta scores: E(): 5.1e-49, 38.14% id in 409 aa, FT and to Escherichia coli ribonuclease D Rnd or B1804 FT SW:RND_ECOLI (P09155) (375 aa) fasta scores: E(): 1.2e-10, FT 28.36% id in 342 aa" FT /protein_id="CAE49927.1" FT /translation="MALLVTQPSEGLPPLAATSRSIYEAAYQLSQGTGPFAIDTERAGA FT YRYDDRAYLLQIRREGSGTVLIDPEANRRLVTSVLGKVINNQPWIIHAAATDLPCLSEL FT GFYPSTIFDTELAGRLAGLPRVNLASMLEERLEVTLKKAHGAEDWSRRPLPHSWLVYAA FT LDVEKLIPLAESMKLLLEAHGKLEWHKQECAHLINTSSHGLDTQRSWQDIKGVSRLTRP FT RQLVVAEALWELRDDEARMKNTSVSRLLPDKVLISVAQRPPRNSQAALRASEIPKQYRK FT RIARWMPTINDVLESDPRTWPHTPQFDENQLPSKYVWEKIHPESLDDFEEVKNSIVEKA FT LLLNLPAENLMQPHSVKELCWQLRDVPRPIAQDDVIECLMRLEARPWQIDNSASVITDT FT LNKIEHAS" FT misc_feature 1413455..1413976 FT /note="HMMPfam hit to PF01612, 3'-5' exonuclease" FT misc_feature 1413470..1413976 FT /note="HMMSmart hit to SM00474, 3'-5' exonuclease" FT misc_feature 1414094..1414333 FT /note="HMMPfam hit to PF00570, HRDC domain" FT CDS complement(1414718..1416625) FT /transl_table=11 FT /gene="dxs" FT /locus_tag="DIP1397" FT /product="1-deoxy-D-xylulose 5-phosphate synthase" FT /EC_number="2.2.-.-" FT /note="Similar to Streptomyces sp 1-deoxy-D-xylulose FT 5-phosphate synthase Dxs SW:DXS_STRC1 (Q9RBN6) (631 aa) FT fasta scores: E(): 1.3e-121, 53.58% id in 627 aa, and to FT Mycobacterium tuberculosis 1-deoxy-D-xylulose 5-phosphate FT synthase Dxs or Rv2682c or MT2756 or MTCY05A6.03c FT SW:DXS_MYCTU (O07184) (638 aa) fasta scores: E(): 2e-141, FT 58.66% id in 629 aa" FT /protein_id="CAE49928.1" FT /translation="MSILEHISSPADVKTLSYEQLDTLASEIREFLVEKVSATGGHLGP FT NLGVVELTLAIHRVFSSPSDPIIFDTSHQSYVHKILTGRAGAFDTLRQKDGLSGYTSRA FT ESNHDWTESSHASASLSYADGLAKAFQLKGEKARNVVAVVGDGALTGGMCWEALNNIAT FT GTERNVVVVVNDNGRSYSPTIGGFADNLAALRMKPSYDRVMEQGKTTLKSLGWVGERTF FT EALHAFKEGVKSSVIPTEMFPELGMKYIGPVNGHNTKAVEAALRYGRDHKGPLIVHVVT FT EKGKGYAPAENDVAELMHSTGVINPKTGEPVGTKSPGWTSVFSKELVKAGETRKDIVAI FT TAAMAGPTGLSAFGEKFPDRLFDVGIAEQHAMTSAAGLALGGLHPVVAIYSTFLNRAFD FT QLLMDVGLLNLPVTIVLDRAGVTGSDGASHNGVWDFAVAGIVPGIRIAAPRDDENLKEL FT FAEALTIDSPTVVRFPKGELPSRLSAQQRFDDGAELLHYSDSDHEDSTPSILVVAVGSL FT VSSVMEIVSDIEECGCNVTVVDPRWAVPVAPSIVGLAADHELVITVEDGIIHGGVGAMI FT NEALNASEIDVPVRNLAFPEVFPEHQSRNQLLDAVGLSPRGIKTQIIAAAESLYLLDKE FT " FT misc_feature complement(1414772..1415134) FT /note="HMMPfam hit to PF02780, Transketolase, C-terminal FT domain" FT misc_feature complement(1415183..1415680) FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domain" FT misc_feature complement(1415309..1415359) FT /note="ScanRegExp hit to PS00802, Transketolase signature FT 2." FT misc_feature complement(1416482..1416541) FT /note="ScanRegExp hit to PS00801, Transketolase signature FT 1." FT CDS complement(1416837..1418099) FT /transl_table=11 FT /locus_tag="DIP1398" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 43.2 kDa protein Rv2689c or MT2763 or MTCY05A6.10c FT TR:O07191 (EMBL:Z96072) (405 aa) fasta scores: E(): FT 3.4e-27, 40.39% id in 401 aa, and to Streptomyces FT coelicolor SC10A5.06 protein TR:O54099 (EMBL:AL021529) (458 FT aa) fasta scores: E(): 1e-20, 31.59% id in 440 aa" FT /protein_id="CAE49929.1" FT /translation="MTKDQQNIERGSVINVEILNAAHGGQGIAKYDGRVIFVKGAFPGD FT RLSANITHVKKKFARATIASIEMPSPLRMQQRCLAAANGAGCCDFGEFDPEIEGRYKAD FT LVLEQLERLGKVSQPPTCEVVSFGSPTQWRTRMRLGVDAQGRAGGFASQSREVVSGVPC FT SQGVMGLLDGIVGAEQNVLRFTPGSQVVVVCDDLGQRTVVETQPAPRGKRTESMVKVVE FT GTGKVSQVVDGVTFELPATGFWQSHKDAAQAYADTIREWFGSLIIRNTDSSLVAWDLYG FT GCGSFASAILSAVDNHGVVHCVESAPAAVSAGKRALSQLVEDQKIVFHTETVERAMNQL FT PAPTLVVLDPPRVGAGAETVRAIAQSGPQAAIHIGCDPATFARDIAEWSRNGFILEKLR FT VFDAFPGTHHCETIGLLTKKN" FT misc_feature complement(1417905..1418081) FT /note="HMMPfam hit to PF01938, TRAM domain" FT CDS complement(1418417..1419136) FT /transl_table=11 FT /locus_tag="DIP1399" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium leprae U1764K ML1029 FT TR:Q49993 (EMBL:U15181) (273 aa) fasta scores: E(): 1e-24, FT 38.88% id in 234 aa, and to Mycobacterium tuberculosis FT hypothetical 27.2 kDa protein Rv2696c or MTCY05A6.17c FT TR:O07198 (EMBL:Z96072) (259 aa) fasta scores: E(): FT 1.5e-24, 37.34% id in 241 aa" FT /protein_id="CAE49930.1" FT /translation="MWPFKRQNGDSDHDENNHEEAAVQQGVDTQKNVTQTDADSPDPIH FT DAISGETGPFDADSVNIEDFDFSDFAGGILNLGSLLVPLPKTSEVQVEMGPDGPKMLHI FT LTQFGRITPVAFAAPKAPGQWRSATQEIAEGMRADNLDVDFQQGPWGREIVGTSDDGNG FT VIRIIGVDGPRWMLRVTLAAPSESAERMAELGREVVARTFVRRGNEPILAGSSLPVALP FT QPLAEQVQQEMMRRAEQ" FT CDS complement(1419195..1419653) FT /transl_table=11 FT /gene="dut" FT /locus_tag="DIP1400" FT /product="deoxyuridine 5'-triphosphate nucleotidohydrolase" FT /EC_number="3.6.1.23" FT /note="Similar to Mycobacterium tuberculosis deoxyuridine FT 5'-triphosphate nucleotidohydrolase Dut or Rv2697c or FT MT2771 or MTCY05A6.18c SW:DUT_MYCTU (O07199) (154 aa) fasta FT scores: E(): 7.2e-32, 63.26% id in 147 aa, and to the FT C-terminal region of Homo sapiens deoxyuridine FT 5'-triphosphate nucleotidohydrolase, mitochondrial FT precursor Dut SW:DUT_HUMAN (P33316) (252 aa) fasta scores: FT E(): 8.2e-14, 41.3% id in 138 aa" FT /protein_id="CAE49931.1" FT /translation="MENDQEKPSMVAIQRLDPELPLPVRKHRGDAGADLFSAESVTIEP FT GHRILVGTGIAIALPIGTVGLIHPRSGRALKEGLSIVNTPGTIDADYRGEIKVCLINLD FT PTTPIRIERGERIAQLLVQKVELVDFCEVETLSETERGVNGYGSTGVN" FT misc_feature complement(1419204..1419602) FT /note="HMMPfam hit to PF00692, dUTPase" FT misc_feature complement(1419345..1419617) FT /note="BlastProDom hit to PD000946, PD000946" FT CDS 1419796..1420308 FT /transl_table=11 FT /locus_tag="DIP1401" FT /product="Putative membrane protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.6 kDa protein Rv2698 or MTCY05A6.19 TR:O07200 FT (EMBL:Z96072) (161 aa) fasta scores: E(): 1.9e-21, 45.28% FT id in 159 aa, and to Mycobacterium leprae U1764I ML12027 FT TR:Q49991 (EMBL:U15181) (157 aa) fasta scores: E(): 3e-19, FT 41.77% id in 158 aa" FT /protein_id="CAE49932.1" FT /translation="MTSQNSSAGSTADTSVIYSEKQWVPWHWWLLGAFVVALITAQLAM FT NRSALWLYAPAVLLTAVAVWVLLSLSKTRIAVEVDPDGTRWLVAGDANLPDSVVSRSMM FT VPATAKRNAMGRQLDPSAFVVSHEWVPEMVMLVLNDDDDPTPYWLVSSKDPETLLHAFL FT PHQHPSR" FT misc_feature order(1419862..1419930,1419940..1420008) FT /note="2 probable transmembrane helices predicted for FT DIP1401 by TMHMM2.0" FT CDS complement(1420344..1420637) FT /transl_table=11 FT /locus_tag="DIP1402" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2773 TR:AAK47088 FT (EMBL:AE007106) (100 aa) fasta scores: E(): 1.6e-17, 57% id FT in 100 aa, and to Streptomyces coelicolor hypothetical 11.0 FT kDa protein SC2E9.05 TR:O54130 (EMBL:AL021530) (98 aa) FT fasta scores: E(): 4.9e-14, 49.49% id in 99 aa" FT /protein_id="CAE49933.1" FT /translation="MATDYDAPRRREEDEMESDSLEGLKAAESNKNDMDDDGEIVEPFE FT LPAVDLSGEELNVTVIPRQADEFTCSECFLVQRNNRIDHVEDDGSVVCKDCA" FT CDS complement(1420829..1421662) FT /transl_table=11 FT /locus_tag="DIP1403" FT /product="Putative hydrolase" FT /note="Similar to Mycobacterium tuberculosis FT inositol-1-monophosphatase SuhB or Rv2701c or MT2775 or FT MTCY05A6.22c SW:SUHB_MYCTU (O07203) (290 aa) fasta scores: FT E(): 1e-38, 45% id in 280 aa, and to Escherichia coli FT inositol-1-monophosphatase SuhB or SsyA or B2533 FT SW:SUHB_ECOLI (P22783) (267 aa) fasta scores: E(): 3.2e-19, FT 37.22% id in 231 aa" FT /protein_id="CAE49934.1" FT /translation="MDSLREYAELAAIAAEVACQASDHIRRTMRELGDVTAGMETKSSD FT VDPVTIVDKAAEHFIADALSHLRPGDGLLGEEGAESSSSTGITWIVDPIDGTVNFIYGI FT PQYAVSVAACIGENVVAGAVINVAISDLYVAACGSGAFVLRSDSDALKSIEASKCSDLQ FT HALIATGFSYSSPRREDQAKLLVSLLPNVRDIRRFGSAALDLCAVAEGCFDGYYEHGLN FT AWDFAAGALIAQEAGAKIKQPELKLASSAGALLLASSSPIFRELELQFYPFDMRK" FT misc_feature complement(1420850..1421647) FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family" FT misc_feature complement(1420949..1420993) FT /note="ScanRegExp hit to PS00630, Inositol monophosphatase FT family signature 2." FT misc_feature complement(1420949..1421005) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(1421009..1421056) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(1421147..1421179) FT /note="ScanRegExp hit to PS00639, Eukaryotic thiol FT (cysteine) proteases histidine active site." FT misc_feature complement(1421354..1421413) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT misc_feature complement(1421357..1421398) FT /note="ScanRegExp hit to PS00629, Inositol monophosphatase FT family signature 1." FT misc_feature complement(1421420..1421470) FT /note="FPrintScan hit to PR00378, Inositol phosphatase FT signature" FT CDS 1421865..1422626 FT /transl_table=11 FT /gene="ppgK" FT /locus_tag="DIP1404" FT /product="polyphosphate glucokinase" FT /EC_number="2.7.1.63" FT /note="Similar to Mycobacterium tuberculosis polyphosphate FT glucokinase PpgK or Rv2702 or MT2776 or MTCY05A6.23 FT SW:PPGK_MYCTU (Q59568) (265 aa) fasta scores: E(): 1.5e-50, FT 57.91% id in 240 aa, and to Corynebacterium ammoniagenes FT polyphosphate glucokinase PpgK TR:Q9AGV8 (EMBL:AF326348) FT (277 aa) fasta scores: E(): 3.2e-59, 63.85% id in 249 aa" FT /protein_id="CAE49935.1" FT /translation="MIRMENIGFGIDVGGSGIKGARVNLDTGEFVGDRIKILTPKPATP FT DAVAETIKRILDQAEWEGPVGITLPSVIHEQRALTAANIDPSWIDVDVNELFARHLGDT FT EVSVLNDADAAGLAEAQFGDPIAREGSVILLTFGTGIGSAFLVNGTLFPNTELGHMLVD FT GEEAEKIASSAAKDRDEIGYGKWAKRVSKVLNEYERLFWPSAFIVGGGISRKAEKWVPR FT LTVNTKVVPAQLRNTAGIVGAAMAASQNLHP" FT CDS 1422759..1422956 FT /transl_table=11 FT /locus_tag="DIP1405" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49936.1" FT /translation="MAFCLTERANTIIRVQSQQPNCMYAIVGYGAMPESFLLSLSFMQF FT LSTKSKTVVAVTLDDLSQFR" FT misc_feature 1422819..1422887 FT /note="1 probable transmembrane helix predicted for DIP1405 FT by TMHMM2.0" FT CDS 1423091..1424599 FT /transl_table=11 FT /gene="sigA" FT /locus_tag="DIP1406" FT /product="RNA polymerase sigma factor" FT /note="Similar to Brevibacterium flavum RNA polymerase FT sigma factor SigA TR:Q9ANT7 (EMBL:AF320817) (498 aa) fasta FT scores: E(): 3.1e-100, 76.93% id in 503 aa, to FT Mycobacterium tuberculosis RNA polymerase sigma factor RpoD FT or SigA or MysA or RpoV or Rv2703 or MT2777 or MTCY05A6.24 FT SW:RPSA_MYCTU (Q60162) (528 aa) fasta scores: E(): 2.2e-83, FT 67.47% id in 535 aa, and to Streptomyces coelicolor RNA FT polymerase principal sigma factor HrdB or SC5B8.10 FT SW:HRDB_STRCO (P18183) (511 aa) fasta scores: E(): 9.5e-62, FT 62.42% id in 495 aa. Note: also similar in its C-terminal FT region to CDIP1413, 329 aa; 58.133% identity in 332 aa FT overlap" FT /protein_id="CAE49937.1" FT /translation="MANAGEASSATVKKAAKKTAAKKTARKVARKVTAVKVAATPTVTS FT SAESATAEPAIELPSSEPVKKAAKKTAKKTAKKVAKKAAKKTAKKTTAKKSTRKSAKKV FT AAPVPEEATQSSEESEDELESLAGEDSDEDYDPHLDEFDDDDEMHTDELGEDDSSDDDS FT DEDEGSSVWDEDESAALRQARKDAELSASADSVRAYLKQIGKVALLNAEQEVSLAKRIE FT AGLYATYRMEQMEEAFNNGDKEAKLTPAVKRDLRAIARDGRKAKNHLLEANLRLVVSLA FT KRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTI FT RIPVHMVEVINKLGRIQRELLQDLGREPTPQELAKEMDITEEKVLEIQQYAREPISLDQ FT TIGDEGDSQLGDFIEDSEAVIAVDAVSFTLLQDQLQDVLHTLSEREAGVVKLRFGLTDG FT MPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD" FT misc_feature 1423127..1423399 FT /note="ProfileScan hit to PS50318, Lysine-rich region." FT misc_feature 1423478..1423615 FT /note="ProfileScan hit to PS50312, Aspartic acid-rich FT region." FT misc_feature 1423877..1424560 FT /note="HMMPfam hit to PF00140, Sigma-70 factor" FT misc_feature 1423895..1423918 FT /note="ScanRegExp hit to PS00867, Carbamoyl-phosphate FT synthase subdomain signature 2." FT misc_feature 1423949..1423972 FT /note="ScanRegExp hit to PS00030, Eukaryotic RNA FT Recognition Motif (RRM) RNP-1 region signature." FT misc_feature 1423967..1424008 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT /note="ScanRegExp hit to PS00715, Sigma-70 factors family FT signature 1." FT misc_feature 1424039..1424065 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 1424411..1424449 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 1424471..1424536 FT /note="Predicted helix-turn-helix motif with score 1603 FT (+4.65 SD) at aa 461-482, sequence RTLDEIGQVYGVTRERIRQIES" FT misc_feature 1424474..1424521 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 1424474..1424554 FT /note="ScanRegExp hit to PS00716, Sigma-70 factors family FT signature 2." FT misc_feature 1424519..1424554 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT stem_loop 1424685..1424732 FT /note="Score 66: 22/22 (100%) matches, 0 gaps" FT CDS complement(1424933..1425406) FT /transl_table=11 FT /locus_tag="DIP1407" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49938.1" FT /translation="MTTPNDSYPAGEPQFGNDLGSGGYPTAGYPTDLPIDEQLPMKNAL FT APWALGLAIVSVVVLLSIFGTIFAWIPAVISVILAIVSLIKLRKMPLGSEPRKGMTISA FT LIIGLVVTIISVAVAILLVTVLKDTLGECASLETSEQQQECVNQKVNELNQNK" FT misc_feature complement(order(1425041..1425106,1425152..1425217, FT 1425224..1425274)) FT /note="3 probable transmembrane helices predicted for FT DIP1407 by TMHMM2.0" FT CDS complement(1425515..1427224) FT /transl_table=11 FT /locus_tag="DIP1408" FT /product="Conserved hypothetical protein" FT /note="Similar, but shorter in its N-terminal region, to FT Mycobacterium tuberculosis hypothetical 65.8 kDa protein FT Rv2917 or MT2985 or MTCY338.05 SW:YT17_MYCTU (Q10966) (602 FT aa) fasta scores: E(): 6.4e-116, 62.39% id in 569 aa, and FT to Mycobacterium leprae hypothetical 65.2 kDa protein FT ML1624 or MLCB250.18c SW:YT17_MYCLE (O33011) (596 aa) fasta FT scores: E(): 8.8e-113, 60.28% id in 569 aa" FT /protein_id="CAE49939.1" FT /translation="MGLRAWQRKALTKYLMQAPKDFLAVATPGAGKTTFALRVATELMG FT NKTVDRVIVVVPTEHLKIQWAQSAARVGLSLDPHFKNSDAVNPQYDGVVVTYAQVSMHP FT FKHYAVATSKKTLVILDEIHHGGDAKSWGDGIREAYGDAERRLALTGTPFRSDDSTIPF FT VRYEQDGEGHLVSRSDHTYGYSDALADGVVRPVVFLAYSGEARWRTNAGEEFSARLGEP FT LNPEQTARAWKTALDPKGDWIPAVLQAAHTRLLQLRRSIPDAGGLVIATDTTTARAYAK FT ILEEISSTPVTVVLSDEVGASKRIEDFSDNTDEWMVAVRMVSEGVDVPRLAVGVYATSA FT STPLFFAQAIGRFVRSRKKGETASVFLPSVPVLLDLAAKLENSRDHVLGKPDRPNEGWD FT DELLAQANREETEKDELRSYESIGAEAELDSLIYDGSSYGTGTFTGSDEEADYLGLPGL FT LDADQMRALLRKHQTEQLNARDEEAKKRQQLENEEREKRKKERESEVHDVASVKIPQLR FT KELNALVSITAGRTGRPHGAIHTEVRKKCGGPPTAMCSAEQLQARIDYLRRW" FT misc_feature complement(1426682..1427218) FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature complement(1427126..1427149) FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT CDS complement(1427224..1427463) FT /transl_table=11 FT /locus_tag="DIP1409" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2781 TR:AAK47097 FT (EMBL:AE007107) (82 aa) fasta scores: E(): 1.4e-17, 65.78% FT id in 76 aa, and to Mycobacterium leprae U1764c ML1016 FT TR:Q49984 (EMBL:U15181) (107 aa) fasta scores: E(): FT 2.8e-16, 65.78% id in 76 aa" FT /protein_id="CAE49940.1" FT /translation="MSTSTKTIERPDIREETTTGDDTPKFFHYVKKDQIVDSAVSGRMV FT VALCGEAFPVTKQAKPGSPVCPDCERVYRGLRKK" FT CDS 1427523..1428011 FT /transl_table=11 FT /locus_tag="DIP1410" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49941.1" FT /translation="MDEDSLTHAHTDFSHHSVDEVHISSGKRAFRRILGHRVELVTDAS FT RGPEQDRHHREVVYAWLQGLRIPFLVASMATYMWLHNVVVSVILFVICIPLPWIAVVIA FT NGVGEKRDPRKKVVYKPAVAREQAEYVALNQTNRRALDQKSSDCFDDTKPMVIDMDSD" FT misc_feature order(1427691..1427759,1427772..1427840) FT /note="2 probable transmembrane helices predicted for FT DIP1410 by TMHMM2.0" FT CDS 1428054..1429589 FT /transl_table=11 FT /locus_tag="DIP1411" FT /product="Putative transferase" FT /note="Similar to Streptomyces coelicolor putative FT transferase SCH5.08c TR:Q9X911 (EMBL:AL035636) (505 aa) FT fasta scores: E(): 3.6e-46, 35.44% id in 522 aa" FT /protein_id="CAE49942.1" FT /translation="MRTPLSSVSPQLVQRFHELGFTPSSIRNFLGRPGFAAISRGEPAS FT VLYAMRENEDSDFYPLIATFILHRPVAAEALHRVLGGSLTDQLTETGVLEIVDASKAYL FT TAKIDIRWLELEDDLFWVFSDTDASMIADHVPGKDHVLGVGAASLSLLATTPRSPVNSV FT LDLGTGSGVQALGQLRHARSVTATDVHPRALDFAEATFAGAHFDVEILDGSWFEPIKNR FT KFDRIVANPPFVVGPPEIEHVYRDSGLDLDGATETVVRGAVDHLHSNGTAHLLGSWVHK FT NGESVASRVAEWIPSHGVIAWFLQRDTVDPIQYVNTWLRDESIDPRSEIGFKRTLSWLD FT HFSRAKVEAVGFGYVAIQRVDDSIPSEVYFEELTHQVDDYLGDEIEEFFVRVDWLREKN FT RDGIAQSQFYLRPGVAKESVSVTDIDSGMGFTHLKYRITRTEGPRWSHEVDEHIVSVIA FT GLHPEGLTLEDVATLYAVSNGLDDESFVDAIIDPVVALVRHGILLPAEITKGW" FT misc_feature 1428519..1428884 FT /note="ProfileScan hit to PS50193, SAM (and some other FT nucleotide) binding motif." FT misc_feature 1428732..1428752 FT /note="ScanRegExp hit to PS00092, N-6 Adenine-specific DNA FT methylases signature." FT CDS 1429600..1430037 FT /transl_table=11 FT /locus_tag="DIP1412" FT /product="Conserved hypothetical protein" FT /note="Similar to Corynebacterium glutamicum ORF1 protein FT TR:Q45303 (EMBL:Z49824) (144 aa) fasta scores: E(): FT 8.7e-38, 71.52% id in 144 aa, and to Mycobacterium FT tuberculosis D-tyrosyl-tRNA Dtd or Rv1897c or MT1948 or FT MTCY180.21 TR:AAK46219 (EMBL:Z97193) (161 aa) fasta scores: FT E(): 5.5e-20, 48.25% id in 143 aa" FT /protein_id="CAE49943.1" FT /translation="MRAVLTRVLSASVTVDNVVVGEINCPSTGGILALVGVGRNDSASA FT WETMTRKIAELRILKGEQSVETAHAPVLLVSQFTLMGRTAKGRRPSWFDAAPSDPAEET FT ITKIANGLRSRGITVYEGRFRADMQVESVNDGPFTVIVECP" FT misc_feature 1429693..1430031 FT /note="HMMPfam hit to PF02580, Uncharacterized ACR, FT COG1490" FT misc_feature 1429699..1429743 FT /note="ScanRegExp hit to PS00678, Trp-Asp (WD) repeats FT signature." FT CDS 1430121..1431110 FT /transl_table=11 FT /gene="sigB" FT /locus_tag="DIP1413" FT /product="RNA polymerase sigma factor" FT /note="Highly similar to Brevibacterium flavum RNA FT polymerase sigma factor SigB TR:Q9ANT6 (EMBL:AF320818) (331 FT aa) fasta scores: E(): 5.6e-106, 90.93% id in 331 aa, and FT to the C-terminal region of Streptomyces coelicolor RNA FT polymerase principal sigma factor HrdB or SC5B8.10 FT SW:HRDB_STRCO (P18183) (511 aa) fasta scores: E(): 1.8e-61, FT 56.91% id in 318 aa. Note: also similar to the C-terminal FT region of CDIP1406, 502 aa; 58.133% identity in 332 aa FT overlap" FT /protein_id="CAE49944.1" FT /translation="MTSPSDVEASTETVDRGSRRNQTNDNPSADLVRVYLNGIGKTALL FT NAEDEVELAQTIEVGLYAEYLLENSQEPLTRAMKRDLKVLVKEGRKARSHLLEANLRLV FT VSLAKRYTGRGMPLLDLIQEGNLGLIRAMEKFDYSKGFKFSTYATWWIRQAITRGMADQ FT SRTIRLPVHLVEQVNKLSRIKREMYQQLGREATNEELAEESGIEESKIEMLLRQSRDPV FT SLDMPVGADEEAPLGDFIEDSEATDAESAVVASLRHSDIRTVLDTLEQREQDVIRLRYG FT LDDGVPRTLDQIGRQFGLSRERVRQIEREVMSKLRDGARAEKLRAYAQ" FT misc_feature 1430388..1431071 FT /note="HMMPfam hit to PF00140, Sigma-70 factor" FT misc_feature 1430406..1430429 FT /note="ScanRegExp hit to PS00867, Carbamoyl-phosphate FT synthase subdomain signature 2." FT misc_feature 1430478..1430519 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT /note="ScanRegExp hit to PS00715, Sigma-70 factors family FT signature 1." FT misc_feature 1430550..1430576 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 1430922..1430960 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 1430982..1431047 FT /note="Predicted helix-turn-helix motif with score 1921 FT (+5.73 SD) at aa 288-309, sequence RTLDQIGRQFGLSRERVRQIER" FT misc_feature 1430985..1431032 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT misc_feature 1430985..1431065 FT /note="ScanRegExp hit to PS00716, Sigma-70 factors family FT signature 2." FT misc_feature 1431030..1431065 FT /note="FPrintScan hit to PR00046, Major sigma-70 factor FT signature" FT CDS 1431335..1432015 FT /transl_table=11 FT /gene="dtxR" FT /locus_tag="DIP1414" FT /product="diphtheria toxin repressor" FT /note="Almost identical to the previously sequenced FT Corynebacterium diphtheriae diphtheria toxin repressor DtxR FT SW:DTXR_CORDI (P33120) (226 aa) fasta scores: E(): 7.6e-81, FT 99.11% id in 226 aa, and similar to Corynebacterium equii FT iron dependent regulatory protein IdeR TR:Q9F7T3 FT (EMBL:AF277002) (230 aa) fasta scores: E(): 1.1e-43, 56.71% FT id in 231 aa" FT /protein_id="CAE49945.1" FT /translation="MKDLVDTTEMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTV FT ARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEACRW FT EHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGVGNSDAAVPGTRVIDAATSMPRKV FT RIVQINEIFQVETDQFTQLLDADIRVGSEVEIVDRDGHITLSHNGKDVELIDDLAHTIR FT IEEL" FT misc_feature 1431341..1431523 FT /note="HMMPfam hit to PF01325, Iron dependent repressor, FT N-terminal DNA binding domain" FT misc_feature 1431410..1431709 FT /note="HMMSmart hit to SM00529, Helix-turn-helix diphteria FT tox regulatory element" FT misc_feature 1431527..1431739 FT /note="HMMPfam hit to PF02742, Iron dependent repressor, FT metal binding and dimerisation domain" FT CDS 1432038..1433024 FT /transl_table=11 FT /gene="galE" FT /locus_tag="DIP1415" FT /product="UDP-glucose 4-epimerase" FT /EC_number="5.1.3.2" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae UDP-glucose 4-epimerase GalE FT SW:GALE_CORDI (P33119) (328 aa) fasta scores: E(): FT 1.6e-126, 99.39% id in 328 aa, and to Corynebacterium FT glutamicum UDP-glucose 4-epimerase GalE SW:GALE_CORGL FT (Q45291) (329 aa) fasta scores: E(): 5.1e-97, 75.22% id in FT 327 aa, and to Lactobacillus casei UDP-glucose 4-epimerase FT GalE SW:GALE_LACCA (O84903) (331 aa) fasta scores: E(): FT 3.1e-55, 48.89% id in 317 aa" FT /protein_id="CAE49946.1" FT /translation="MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDNLTTGNRDAVPLGA FT TFVEGDIKDVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKR FT NNVRNIVFSSTAATYGEPETVPITEDAPTHPTNPYGATKLSIDYAITSYAHAYGFAATS FT LRYFNVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHI FT RDLADAHILALQSNVEGSHRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPRRAGDP FT AVLIASSAKAQSELGWKPQRTDLHTIVSDAWAFTSQLGDKAHSASRG" FT misc_feature 1432044..1432994 FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase family" FT CDS complement(1433073..1434116) FT /transl_table=11 FT /locus_tag="DIP1416" FT /product="Hypothetical protein" FT /note="No significant database matches" FT /protein_id="CAE49947.1" FT /translation="MTSTPHSPSEMFASIPGIFGFYPEESIVVLTLMHTKESCYQLGPV FT MRLDLKDLRYLSDIGDTLSAIEPDLVFGLIISGQKPEAIEDLRGLIEFVADCEIVPFDA FT CWYTSAIESGGKYDAIWLNEAMTEAALEYQSWRKGRIPLIANTGITGEMIHAGHLPELS FT RKDIEKHYAQAEESEQWDEYLITERYAELFDDPSTSFRSAQECIDAFSQAVELMRTEKL FT ITDAALTVAAFLKNKMSRDIIIECCVHNANTVKEALCYVSRHTKGFVRANALALYALCI FT VDSPWGNHITCVLQAAHNTLPFHHLTALVAEAYYRGLSGSIVDLVVSGSQEAQKHFGEA FT TNVKSAV" FT CDS 1434368..1435309 FT /transl_table=11 FT /locus_tag="DIP1417" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis CDC1551 FT conserved hypothetical protein MT2787 TR:AAK47103 FT (EMBL:AE007107) (324 aa) fasta scores: E(): 2.1e-45, 45.09% FT id in 306 aa, and to Streptomyces coelicolor conserved FT hypothetical protein SCI52.04 TR:Q9ADA5 (EMBL:AL590507) FT (333 aa) fasta scores: E(): 4.2e-12, 26.64% id in 304 aa" FT /protein_id="CAE49948.1" FT /translation="MNEREAKMYELEFPAPDVASDGVDGPTLIIAMQGYADAGLAVEAS FT ADHLLSALEHRPVAVFNNDELIDYRSRRPAVTIDHNIVVDANELKLSMDVLRDSNGTPF FT LLLSGPEPDLRWDAFSQAVADLVRRFGVRRTICIYAAPMTVPHTRPLIVSAHGNSLDLI FT KHHFSIDSKVTIPGSASLHIERLLNKNNIDVAGYTAHVPHYLSASAYPLATLKLLEAIT FT TSTNLDFPLKTLEADAQKTALQVEEQVAGSQEIESVVKILEQQYDEELEKYRERNPKAL FT EIAEDDLPDADELGEEFERFLANIDEENGSDD" FT CDS 1435342..1437876 FT /transl_table=11 FT /locus_tag="DIP1418" FT /product="Putative helicase" FT /note="Similar in its full length to Streptomyces FT coelicolor putative helicase SCG8A.06 TR:Q9KZJ3 FT (EMBL:AL353863) (854 aa) fasta scores: E(): 2.1e-184, 56.4% FT id in 828 aa, and to the C-terminal region of FT Schizosaccharomyces pombe putative helicase SPAC6F12.16c FT SW:YDVG_SCHPO (O14232) (1117 aa) fasta scores: E(): FT 1.5e-13, 27.64% id in 445 aa" FT /protein_id="CAE49949.1" FT /translation="MNLTQMLPDLDDVPESLLDEAIFDSFLSWTRSKDLALYPAQEEAA FT LGILAGDNVILATPTGSGKSMVAIAAHFIAMARGQRSFYTAPIKALVNEKFFALCDIFG FT PESVGMMTGDATVNGSAPIICATAEIVANIALRDGTDADIDQVVMDEFHYYSEPGRGWA FT WQVPLLELPRTQFLLMSATLGDTTFIQKDLSDRTGRTTNLVAGATRPVPLQFSYVYTPV FT HETIQDLLDTNNAPIYVVHFTQREAIERAQSLTSMTVIDSETKEKIATEIGNFKFTTTF FT GHTLSKLLRKGIGVHHAGMLPKYRRLVEKLSQTGLLKIICGTDTLGVGINVPIRTVLFT FT GLAKFDGSKQRILASREFHQIAGRAGRAGYDTVGNVVIEAPEHEIENWRLRQRAGSDLK FT KLKKLRKKSARDGEVTWGEKTYERLSEAEPENLQSQFRISNSMLLNVIARSGDAYVHLK FT HLLRTNHDTRDKQNKDILTALELFRGLVAAGIVEKLDSPDSTGRKYVITEDLRRDFALN FT QPLAPFALAALEILDKESTSYALDVISVFESILEDPRVVLIAQQKQARGEEIAALKAEG FT VEYTERMNIVEEISWPKPLEEILEPAFDTYCSGHPWAKEFTLSPKSIVRDMIEHGMTFS FT DFIATYGLSRSEGVVLHYLTDAWKTLSHSVPTEYVSDELEEIIEWLGELVRQVDSSLID FT EWANMADPDAPISQDTVDQQRAFGVEDPNAITANSRAFAVMVRNLMFRMVQLFAAEEEE FT KLEALTDYLDEQPDFSEALDVYFDEYSDLDVGPDARGREYFLLKKDGRIWSVRQIIKDP FT NDDRAFSFAATVDLNASDAADEVRFAKFSIDS" FT misc_feature 1435420..1435890 FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase" FT misc_feature 1435438..1435983 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 1436188..1436448 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT stem_loop 1437883..1437940 FT /note="Score 81: 27/27 (100%) matches, 0 gaps" FT CDS complement(1437952..1438476) FT /transl_table=11 FT /locus_tag="DIP1419" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis AhpD protein FT or Rv2429 or MT2504 or MTCY428.17c SW:AHPD_MYCTU (Q57353) FT (177 aa) fasta scores: E(): 1.5e-38, 59.53% id in 173 aa, FT and to Streptomyces viridosporus hypothetical 18.8 kDa FT protein AhpX TR:Q9X5V1 (EMBL:AF127576) (174 aa) fasta FT scores: E(): 1.5e-28, 49.13% id in 173 aa" FT /protein_id="CAE49950.1" FT /translation="MSLDNLKSGLPEYAKDLKLNLGSLARSTELTEQQLWGTFLAVAAA FT TRNEAVFSEISEEASEHLSEEAINAALGAASIMAMNNVAYRAKGWLGDDYAQVKMGLRM FT NIIAKPGVDKVDFELWSLAVSTVNGCEHCTIAHEKTVRSEGLTKEQIFEAVKIAATLQG FT VAQAIEIEASR" FT misc_feature complement(1437961..1438239) FT /note="HMMPfam hit to PF02627, Carboxymuconolactone FT decarboxylase" FT CDS complement(1438479..1439075) FT /transl_table=11 FT /gene="dirA" FT /locus_tag="DIP1420" FT /product="iron repressible polypeptide (putative FT reductase)" FT /note="Almost identical to previously sequenced FT Corynebacterium diphtheriae iron repressible polypeptide FT DirA TR:Q46025 (EMBL:U18620) (198 aa) fasta scores: E(): FT 8.8e-79, 98.99% id in 198 aa, and to Mycobacterium FT smegmatis alkyl hydroperoxide reductase C AhpC TR:Q57529 FT (EMBL:U43719) (195 aa) fasta scores: E(): 5.2e-52, 66.12% FT id in 186 aa" FT /protein_id="CAE49951.1" FT /translation="MSILTVGEKFPEFNLTALKGGDLHDVNASQPEDYFETVSLDKYEG FT KWKVVFFYPKDFTFVCPTEIAAFGKLDEEFQDRDTQILGGSIDNEFSHFNWRATHPELK FT TVPFPLFSDIKHDLIKALGVENEEGVADRATFIIDPDGIIQFVSVTPDAVGRNVDEVLR FT VLDALQSEEVCACNWQKNDPTKNIDKFAELEKGLN" FT misc_feature complement(1438587..1439060) FT /note="HMMPfam hit to PF00578, AhpC/TSA family" FT RBS complement(1439080..1439085) FT CDS 1439301..1440239 FT /transl_table=11 FT /locus_tag="DIP1421" FT /product="Putative transcriptional regulator" FT /note="Similar to Erwinia carotovora hydrogen FT peroxide-inducible genes activator OxyR SW:OXYR_ERWCA FT (P71318) (302 aa) fasta scores: E(): 1.6e-34, 37.5% id in FT 296 aa, and to Escherichia coli hydrogen peroxide-inducible FT genes activator OxyR or MomR or Mor or B3961 or Z5519 or FT ECS4890 SW:OXYR_ECOLI (P11721) (305 aa) fasta scores: E(): FT 7e-34, 37.8% id in 291 aa" FT /protein_id="CAE49952.1" FT /translation="MSNKEYRPTLAQLRTFATIAENKHFGTAAAKLSISQPSLSQALAA FT LENGLGVQLIERSTRRVIVTPAGEMLLPYAKATLDAADAFLAHAHGASGTLSGPMSLGI FT IPTIAPYILPNLLDAVRDEFPDLELRIVEEQTKHLIALLRDGHIDCAILALPTEQIGFT FT EMPLYVEDFRMVTTEDHPLAHRNDLTLSHLKELDLLLLDDGHCLRDQIVDLCRHVDVNP FT THSKAAETRAASLTTVMQLVSAGMGATLVPESSVSIECSRPGLATATFAPEVSASRQVG FT MVYRTSSSRTEEFQKLGSIVGQAFQDVIAQN" FT misc_feature 1439328..1439756 FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protein, lysR family" FT misc_feature 1439367..1439432 FT /note="Predicted helix-turn-helix motif with score 1206 FT (+3.29 SD) at aa 23-44, sequence KHFGTAAAKLSISQPSLSQALA" FT misc_feature 1439370..1439462 FT /note="ScanRegExp hit to PS00044, Bacterial regulatory FT proteins, lysR family signature." FT misc_feature 1439373..1439408 FT /note="FPrintScan hit to PR00039, LysR bacterial regulatory FT protein HTH signature" FT misc_feature 1439406..1439438 FT /note="FPrintScan hit to PR00039, LysR bacterial regulatory FT protein HTH signature" FT misc_feature 1439436..1439471 FT /note="FPrintScan hit to PR00039, LysR bacterial regulatory FT protein HTH signature" FT CDS complement(1440295..1441260) FT /transl_table=11 FT /locus_tag="DIP1422" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49953.1" FT /translation="MTTPRNPFDPQDNEYEPYPSTSHPEDRGFNVPADGYPTSSPLGSY FT SGSYAGYGSGASSAGEQKFHKDLKDPFVEHAGKADIFAAIEYGFRIVFKKPLWILGAFL FT ILAVVGVGTATATYLSFGASGGFEDPSAVPDPSIRGTDFLVNFGSILIAAFGIRLVLLQ FT LDGLPITLGEVFTKARWLKTTATEFLIFILLLIPMGISIAVLFVTAFNLQTGGSWVPFV FT LVLVLILVVATFISPFFTYAPYFVCDGRASVIEGIRLGFVQVSKNYWQAVGFSVFNFLI FT STFGLLITLGLGAIIIVPAMMNAQAHMYRQIAQGTVPLKA" FT misc_feature complement(order(1440367..1440432,1440535..1440600, FT 1440631..1440696,1440775..1440831,1440904..1440969)) FT /note="5 probable transmembrane helices predicted for FT DIP1422 by TMHMM2.0" FT CDS 1441388..1445341 FT /transl_table=11 FT /locus_tag="DIP1423" FT /product="Putative ATP-dependent helicase" FT /note="Similar to Escherichia coli ATP-dependent helicase FT HrpA or B1413 SW:HRPA_ECOLI (P43329) (1300 aa) fasta FT scores: E(): 1.7e-172, 46.92% id in 1315 aa, and to Vibrio FT cholerae ATP-dependent helicase HrpA VC1382 TR:Q9KS77 FT (EMBL:AE004217) (1309 aa) fasta scores: E(): 2.3e-171, FT 47.6% id in 1317 aa" FT /protein_id="CAE49954.1" FT /translation="MFIMGKRNLKHSNRRVKPTTQDSPEVKELKASCMSQLSGLGLALH FT RSFERRITKAHSTKALEAIAQDLATALKSIEKRRSSIPVISYPDNLPVSSQRDEIAAAI FT QENQVVIIAGETGSGKTTQIPKICLDLGHGITGLIGHTQPRRLAARTVAERIADELDQP FT IGESVGYAIRFDDRVSPSTCIKLMTDGILLAEMQRDRYLNAYDTIIIDEAHERSLNIDF FT ILGYLKQLLPKRPDLKVIITSATIDPERFAHHFSDENGTPAPIIEVSGRTYPVEVLYRP FT LQLEDGTSLIDVDPIDGLISAIKELMSYGDGDILCFFAGESDIRDAMEAIKEQRWRNVE FT VTPLFGRLSNQEQHKVFTSHTGRRIVLATNIAETSLTVPGIHFVVDLGTARISRYSSRT FT KVQRLPIEPISQASARQRSGRCGRVADGIAIRLYSEEDFLSRPEFTDPEILRTNLANVI FT LQMASLRLGHIDDFPFIQAPDTKSIRDGILLLHELGALTTTDTRTDLPRLTTIGKTLAR FT IPLDPRLGRMLIEAERLGCLAHVMVLVAALSIQDVRERPLDYQAQADQLHARFKDPQSD FT FSSYLKLWAYINQRRDELSGNAFKKVMQQEFLHYMRIREWFDLVRQLKSIGEQVGWKSF FT ERSDATDNDCIHQALLAGLLSHIGIKEGDFREFVGARNTRFMVFPGSSLAKKPPQFVMA FT GELVETSRLWARDVAAIDPRWVEPLAQNLLKHQYSEPHWSLKRGAAMVYQRSTLYGVPI FT VVDRLINLATIDAVGAREIFIREALINGQWTTHHSFFKNNMQKLEAVNTLEEKARRRDI FT VVTEDTLYEFYNDRLPQSVVSTRAFDHWWKKTRTQTPDLLDFDPDKLISDSAEEVNAER FT YPDSWYDNGVELELRYRFEPGHPDDGVTVNVPVPYLASLEESGFEWLVPGFIQELLTAS FT LKTLPKHLRKKIVPAPNYANLIQPRISFRKGPLTQAITNALKDAGITGIEAEDFDLSAL FT PDHLRITFAAIDKHGKVIDKDKNLARLKTRQKNKIRASALKIGKAVHQSAVTTWTSSTL FT GKIPEEVSTKVDGQLIKTYPALVIGEQGFSVEAKPTRAEADASMLTATLAMLMKASNIN FT TQKMLNGLPLQQRVAVENYPHGSSNGLVQDVKAAVIRDLLIERGGPVRSPEEFDVLKKE FT ITPKVPRLTRQAVVQLAPSINCYLKTRDEVAHWEGDAIDDISRQLDFLLPPFAVSHHGI FT RHLARLPRLCEAITIRLDSMSRDSYKDAELQLVINRLENALYAKANRGGIPKSKINDIA FT WKIQELRVSLFAQRLGTAEKVSERKIHKLIEAL" FT misc_feature 1441652..1442221 FT /note="HMMSmart hit to SM00487, DEAD-like helicases FT superfamily, catalytic domain" FT misc_feature 1441727..1441750 FT /note="ScanRegExp hit to PS00017, ATP/GTP-binding site FT motif A (P-loop)." FT misc_feature 1441802..1442683 FT /note="ProfileScan hit to PS50136, DNA/RNA helicase domain FT (DEAD/DEAH box)." FT misc_feature 1442369..1442662 FT /note="HMMSmart hit to SM00490, helicase superfamily FT c-terminal domain" FT misc_feature 1442372..1442662 FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain" FT stem_loop 1445340..1445394 FT /note="Score 60: 20/20 (100%) matches, 0 gaps" FT CDS complement(1445404..1445859) FT /transl_table=11 FT /locus_tag="DIP1424" FT /product="Conserved hypothetical protein" FT /note="Similar to Mycobacterium tuberculosis hypothetical FT 17.2 kDa protein Rv2718c or MT2791 or MTCY05A6.39c FT SW:YR18_MYCTU (O07217) (154 aa) fasta scores: E(): 1.3e-35, FT 69.65% id in 145 aa, and to Bacillus subtilis hypothetical FT protein YtcG SW:YTCG_BACSU (Q45549) (152 aa) fasta scores: FT E(): 1.4e-21, 42% id in 150 aa" FT /protein_id="CAE49955.1" FT /translation="MYCPFCHNDQSRVIDSRVIDSGSAIRRRRECTQCKNRFTTVEKAQ FT LLVVKRNGLTEPFSREKVIVGVRRACQGRDVSDDALKRLAQQVEERVRLHGSSQIHANE FT IGLAILEPLRELDEVAYLRFASVYKSFESADDFESEIRLMRRRDRSN" FT misc_feature complement(1445422..1445853) FT /note="HMMPfam hit to PF02644, Uncharacterized BCR, FT COG1327" FT CDS complement(1445957..1446292) FT /transl_table=11 FT /locus_tag="DIP1425" FT /product="Putative membrane protein" FT /note="No significant database matches" FT /protein_id="CAE49956.1" FT /translation="MSISYVLSASKSHDGRRVEVGPASEMWDISAFTPTVSEQSVRTLS FT HAGPYGEGQESKPHLNEEVSQSFGHKVRNALIGALLGLIVATSFIAVDGMMHPEEMASV FT GSGAVAK" FT misc_feature complement(1446002..1446067) FT /note="1 probable transmembrane helix predicted for DIP1425 FT by TMHMM2.0" FT CDS 1446632..1447345 FT /transl_table=11 FT /gene="lexA" FT /locus_tag="DIP1426" FT /product="transcriptional repressor" FT /EC_number="3.4.21.88" FT /note="Similar to Mycobacterium tuberculosis LexA repressor FT or Rv2720 or MT2793 or MTCY05A6.41 SW:LEXA_MYCTU (Q50765) FT (217 aa) fasta scores: E(): 1.1e-21, 56.75% id in 222 aa, FT and to Rhodobacter sphaeroides LexA repressor SW:LEXA_RHOSH FT (Q9ZFA4) (228 aa) fasta scores: E(): 1.1e-14, 31.85% id in FT 226 aa" FT /protein_id="CAE49957.1" FT /translation="MPVKDSSSNKKNQIGKLSERQRRILEVITDAVSLRGYPPSIREIG FT DAAGLQSTSSVAYQLKELEKKGYLRRDPNKPRAVDVRALPDPIPSKPGRKPGPKKSSVA FT ISPDPAETSPTSFVPIVGSIAAGNPILAEENVDGYFPFPSEIVGDGDLFMLQVEGESMR FT DAGILHHDWVVVRSQPVAEQGEFVAALIEGEATVKEFHSDSSGVWLLPHNDAFDPIPAE FT HAEIMGKVVSILRKL" FT misc_feature 1446671..1446865 FT /note="HMMPfam hit to PF01726, LexA DNA binding domain" FT misc_feature 1446941..1447306 FT /note="HMMPfam hit to PF00717, Peptidase family S24" FT misc_feature 1447088..1447120 FT /note="FPrintScan hit to PR00726, Repressor LexA serine FT protease (S24) family signature" FT misc_feature 1447121..1447156 FT /note="FPrintScan hit to PR00726, Repressor LexA serine FT protease (S24) family signature" FT misc_feature 1447205..1447243 FT /note="FPrintScan hit to PR00726, Repressor LexA serine FT protease (S24) family signature" FT CDS 1447668..1448444 FT /transl_table=11 FT /locus_tag="DIP1427" FT /product="Putative sugar related operon transcriptional FT regulator (PTS system)" FT /note="Similar to Streptomyces coelicolor putative FT DeoR-family transcriptional regulator SCE22.15c TR:Q9KYU7 FT (EMBL:AL355832) (253 aa) fasta scores: E(): 9.3e-31, 44.85% FT id in 243 aa, and to Escherichia coli galactitol FT utilization operon repressor GatR or B2087/B2090 FT SW:GATR_ECOLI (P36930) (259 aa) fasta scores: E(): 3.9e-20, FT 35.76% id in 260 aa. Note: Similar also to the downstream FT CDIP1429 267 aa, 41.634% identity in 257 aa overlap" FT /protein_id="CAE49958.1" FT /translation="MYSEERRRQIASLTAVEGRVNVTELAARFDVTAETIRRDLAVLDR FT EGVVHRVHGGAVANQTFQTAEFSLDTRSRSASGAKNSIAHAALSYLPEAQGGLFLDAGT FT TTAALAELLAAQPFAKHWSIVTNSLSIALTLANSGLDEIQLLGGSVRAITQAVVGDTAL FT RTLALMRADVAFIGTNALTIDHGLSTADSQEAAIKSAMITNAHKVVVLCDSTKMGTDYL FT VSFGSISDIDVIITDANAPESFVKALRDRDVEVIIA" FT misc_feature 1447668..1454900 FT /note="Putative PTS system" FT misc_feature 1447683..1447841 FT /note="HMMSmart hit to SM00420, helix_turn_helix, FT Deoxyribose operon repressor, DNA-binding" FT misc_feature 1447683..1448378 FT /note="HMMPfam hit to PF00455, Bacterial regulatory FT proteins, deoR family" FT misc_feature 1447725..1447790 FT /note="Predicted helix-turn-helix motif with score 1468 FT (+4.19 SD) at aa 20-41, sequence VNVTELAARFDVTAETIRRDLA" FT misc_feature 1447737..1447781 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT misc_feature 1447779..1447835 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT stem_loop complement(1448474..1448525) FT /note="Score 72: 24/24 (100%) matches, 0 gaps" FT CDS complement(1448538..1450232) FT /transl_table=11 FT /gene="ptsI" FT /locus_tag="DIP1428" FT /product="phosphoenolpyruvate:sugar phosphotransferase FT system enzyme I (PTS system)" FT /note="Similar to Corynebacterium glutamicum FT phosphoenolpyruvate:sugar phosphotransferase system enzyme FT I PtsI TR:AAK76445 (EMBL:AF392620) (565 aa) fasta scores: FT E(): 2.9e-159, 76.69% id in 562 aa, and to Xanthomonas FT campestris multiphosphoryl transfer protein FruB FT SW:PTF1_XANCP (P45597) (837 aa) fasta scores: E(): 1.4e-50, FT 37.2% id in 559 aa" FT /protein_id="CAE49959.1" FT /translation="MNNVMTDTIIKGTGVVSGVRYAKAVWISPRPKLPQAGEVVDEADR FT AQQLDNFVAAADAVAQRLLDRSEHAEGAASEVLKATAGMVKDRGWQKAVKKGIQGGHPA FT EYAVVAATTKFVSMFEAAGGVMAERTTDLRDIRDRVIAELRGDLEPGLPDVHEQVVLFA FT DDLSPADTAALNTDYFVGLVTELGGPTSHTAIIARQLNVPCIVATGEKIHKIEVGTDVL FT IDGALGTVTLDADPETARAAELESRMLAERIAQWKGPAETKDGHRVQLLANVQDGKAAR FT IAATESQAEGIGLFRTEMCFLTATEEPSVDEQAAVYKKVLEQFPDSKVVVRSLDAGSDK FT PVAFASMADEMNPALGVRGLRVARANESLLTRQLDAIAQAAHELGRDENSPTWVMAPMV FT ATTREARWFAGLCAERGLTAGAMIEVPAASLMADKLMPYLDFVSIGTNDLTQYTMAADR FT MSPQLAYLTDPWQPAVLRLIKHTCEEGKRFNTAVGVCGEAAADPLLACVLTGLGVNSLS FT AASTAIAGVGAQLASVDFETCVRAAEAAVNAEGAIDARAAVRKVLQP" FT misc_feature complement(1448622..1449500) FT /note="HMMPfam hit to PF02896, PEP-utilizing enzyme, TIM FT barrel domain" FT misc_feature complement(1448742..1449755) FT /note="BlastProDom hit to PD000940, PD000940" FT misc_feature complement(1448859..1448915) FT /note="ScanRegExp hit to PS00742, PEP-utilizing enzymes FT signature 2." FT misc_feature complement(1449549..1449812) FT /note="HMMPfam hit to PF00391, PEP-utilizing enzyme, mobile FT domain" FT misc_feature complement(1449639..1449674) FT /note="ScanRegExp hit to PS00370, PEP-utilizing enzymes FT phosphorylation site signature." FT CDS 1450500..1451303 FT /transl_table=11 FT /locus_tag="DIP1429" FT /product="Putative sugar related operon transcriptional FT regulator (PTS system)" FT /note="Similar to Spiroplasma citri transcriptional FT regulator FruR TR:Q9RMF6 (EMBL:AF202665) (233 aa) fasta FT scores: E(): 7.3e-17, 33.75% id in 237 aa, and to FT Escherichia coli galactitol utilization operon repressor FT GatR or B2087/B2090 SW:GATR_ECOLI (P36930) (259 aa) fasta FT scores: E(): 4e-13, 30% id in 240 aa. Note: Similar also to FT the upstream CDIP1427 258 aa, 41.634% identity in 257 aa FT overlap" FT /protein_id="CAE49960.1" FT /translation="MATVEEVNLRQATIVSLTNETGRSSVTQLAQQFDVTPETIRRDLK FT SLEQQGLLRRVHGGAVSGSPKLNVDVFAVDDDDDLPIHQSQRRKQSIALTALSLIPGPE FT ASIFIDAGSTTETFANVLARTYLGQNWLVVTTSPNVARTLSSAGVPDVIMVGGFVKART FT QAIVGPHAIETLHSMRADIAFLGTNGIDPHKGFTTSDEREAKVKHEMIAHAQTSVILCD FT SGKIGHSSAVSFAQLADVDFVVTDRNSPPQLSRQLGEPNLQVVIP" FT misc_feature 1450527..1450685 FT /note="HMMSmart hit to SM00420, helix_turn_helix, FT Deoxyribose operon repressor, DNA-binding" FT misc_feature 1450527..1451237 FT /note="HMMPfam hit to PF00455, Bacterial regulatory FT proteins, deoR family" FT misc_feature 1450569..1450634 FT /note="Predicted helix-turn-helix motif with score 1839 FT (+5.45 SD) at aa 24-45, sequence SSVTQLAQQFDVTPETIRRDLK" FT misc_feature 1450581..1450625 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT misc_feature 1450623..1450679 FT /note="FPrintScan hit to PR00037, LacR bacterial regulatory FT protein HTH signature" FT CDS 1451300..1452265 FT /transl_table=11 FT /locus_tag="DIP1430" FT /product="Putative phosphofructokinase (PTS system)" FT /note="Similar to Rhodobacter capsulatus FT 1-phosphofructokinase FruK SW:K1PF_RHOCA (P23386) (316 aa) FT fasta scores: E(): 1.2e-05, 32.6% id in 322 aa, and to FT Escherichia coli 6-phosphofructokinase isozyme 2 PfkB or FT B1723 SW:K6P2_ECOLI (P06999) (309 aa) fasta scores: E(): FT 0.00069, 30.51% id in 308 aa" FT /protein_id="CAE49961.1" FT /translation="MILTFTPNPSIDKTLQLDSVLTRGAVQRLSGVQTVAGGKGINVAV FT ALAKAQADTVALYPAHPEDPFNKLIRESQIPAQRVTIRGEVRINTTVTEPDGTTTKLNI FT QGPQIHEDELQALQKNLLERTARCSWAVLAGSLPPGVPTDWYVHLTKLLNARHPSLRIA FT IDTSDVPLQKVGESFGNCALSLIKPNGMELGQLVGLDGYVLEKEAAQGNFDPVVSAARK FT AILQGVENVLVTLGAAGAVLVTKDHAWKATPPPITVLSTVGAGDASLAGFILASEDGLP FT PEKCLAQAVAYGAAAASFAGTHMPYPHQIDVNHTPVTLLS" FT misc_feature 1451312..1452226 FT /note="HMMPfam hit to PF00294, pfkB family carbohydrate FT kinase" FT misc_feature 1451393..1451452 FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature 1451990..1452025 FT /note="FPrintScan hit to PR00990, Ribokinase signature" FT misc_feature 1452077..1452118 FT /note="ScanRegExp hit to PS00584, pfkB family of FT carbohydrate kinases signature 2." FT CDS join(1452469..1452810,1452864..1453349,1453454..1453747, FT 1453750..1454124,1454140..1454388) FT /pseudo FT /transl_table=11 FT /locus_tag="DIP1431" FT /product="Putative fructose-specific IIBC (PTS system) FT (pseudogene)" FT /note="Pseudogene. Similar to Escherichia coli PTS system, FT fructose-specific IIBC component FruA or PtsF or B2167 FT SW:PTFB_ECOLI (P20966) (563 aa) fasta scores: E(): 2.4e-58, FT 43.86% id in 481 aa, and to Rhodobacter capsulatus PTS FT system, fructose-specific IIBC component FruA SW:PTFB_RHOCA FT (P23387) (578 aa) fasta scores: E(): 2.5e-57, 38.86% id in FT 584 aa. Presents multiple frameshifts at residues 114, 276 FT and 374" FT /db_xref="PSEUDO:CAE49962.1" FT misc_feature 1452469..1452819 FT /note="HMMPfam hit to PF00359, FT Phosphoenolpyruvate-dependent sugar phosphotransferase FT system, EIIA 2" FT misc_feature 1452493..1452786 FT /note="BlastProDom hit to PD001689, PD001689" FT misc_feature 1452918..1453181 FT /note="HMMPfam hit to PF02379, PTS system, Fructose FT specific IIB subunit" FT misc_feature join(1453269..1453349,1453454..1453490,1453741..1453809, FT 1453828..1453896,1453954..1454022,1454146..1454220, FT 1454257..1454325) FT /note="1 probable transmembrane helix predicted for DIP1434 FT by TMHMM2.0" FT /note="3 probable transmembrane helices predicted for FT DIP1433 by TMHMM2.0" FT /note="2 probable transmembrane helices predicted for FT DIP1432 by TMHMM2.0" FT /note="Signal peptide predicted for DIP1434 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.737 between residues 25 and 26" FT misc_feature 1453669..1454133 FT /note="HMMPfam hit to PF02378, Phosphotransferase system, FT EIIC" FT RBS 1454618..1454624 FT CDS 1454634..1454900 FT /transl_table=11 FT /locus_tag="DIP1435" FT /product="Putative carbohydrate carrier protein (PTS FT system)" FT /note="Similar to Bacillus megaterium phosphocarrier FT protein HPr PtsH SW:PTHP_BACME (O69250) (88 aa) fasta FT scores: E(): 3e-06, 37.5% id in 80 aa, and to Bacillus FT subtilis phosphocarrier protein HPr PtsH SW:PTHP_BACSU FT (P08877) (87 aa) fasta scores: E(): 0.00032, 30.86% id in FT 81 aa" FT /protein_id="CAE49963.1" FT /translation="MASKTVSVGSSVGLHARPASIIAEAAGEFDEDIFLTIEGEDDDET FT DAASSLMIMALGAEKGDKVTVTSENPEAVEKIAALIEKDLDAV" FT misc_feature 1454634..1454879 FT /note="HMMPfam hit to PF00381, PTS HPr component FT phosphorylation site" FT misc_feature 1454670..1454693 FT /note="ScanRegExp hit to PS00369, PTS HPR component FT histidine phosphorylation site signature." FT misc_feature 1454670..1454720 FT /note="FPrintScan hit to PR00107, Phosphocarrier protein FT signature" FT misc_feature 1454754..1454801 FT /note="FPrintScan hit to PR00107, Phosphocarrier protein FT signature" FT misc_feature 1454799..1454852 FT /note="FPrintScan hit to PR00107, Phosphocarrier protein FT signature" FT CDS 1455065..1456183 FT /transl_table=11 FT /locus_tag="DIP1436" FT /product="Putative oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative FT oxidoreductase SCE15.13c TR:Q9X888 (EMBL:AL049707) (367 aa) FT fasta scores: E(): 1.8e-106, 72.11% id in 355 aa, and to FT Photorhabdus luminescens alkanal monooxygenase alpha chain FT LuxA SW:LXA1_PHOLU (P19839) (360 aa) fasta scores: E(): FT 2.5e-06, 25.87% id in 228 aa" FT /protein_id="CAE49964.1" FT /translation="MQFGIFTIGDVTTDPTTGVTPSEHDRINAMTQIALKAEEVGLDVF FT ATGEHHNPPFVPSSPTTHLAYIAAQTKNIQLSTSTTLITTNDPVKIAEDYAFLQHLSGG FT RVDLMMGRGNTGPVYPWFGKDIRKGIPLAVENYHLLRKLWREPVVNWKGEFRTPLQNYT FT STPAPLGDVPPFVWHGSIRSVQIAEQAAFYGDGFFHNNIFWNKEHTAQMVNIYRQRFEK FT YGHGRADQAIVGLGGQVFIGETEAEAKKFFRPYFDNAPVYGHGPSLEEFTELTPLTVGT FT VEQVIERTMQFADWVGDYQRQLFLIDHAGLPLEVVLNQIEILGTQVVPELRRRMEKRRP FT DHVPSDPPSHSFLKAHPEHPHFLVEPSKTSAQ" FT misc_feature 1455065..1456057 FT /note="HMMPfam hit to PF00296, Luciferase-like FT monooxygenase" FT CDS 1456242..1456907 FT /transl_table=11 FT /locus_tag="DIP1437" FT /product="Putative oxidoreductase" FT /note="Similar to Streptomyces coelicolor putative FT oxidoreductase SCE15.12c TR:Q9X887 (EMBL:AL049707) (222 aa) FT fasta