ID AY948117; SV 1; circular; genomic DNA; STD; PRO; 2426 BP. XX AC AY948117; XX DT 22-MAY-2005 (Rel. 83, Created) DT 06-JAN-2006 (Rel. 86, Last updated, Version 2) XX DE Campylobacter coli plasmid p3386, complete sequence. XX KW . XX OS Campylobacter coli OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OG Plasmid p3386 XX RN [1] RP 1-2426 RX DOI; 10.1016/j.plasmid.2005.06.001. RX PUBMED; 16120460. RA Jesse T.W., Pittenger-Alley L.G., Englen M.D.; RT "Sequence analysis of two cryptic plasmids from an agricultural isolate of RT Campylobacter coli"; RL Plasmid 55(1):64-69(2006). XX RN [2] RP 1-2426 RA Jesse T.W., Englen M.D., Pittenger-Alley L.A., Fedorka-Cray P.J.; RT ; RL Submitted (28-FEB-2005) to the INSDC. RL Bacterial Epidemiology and Antimicrobial Resistance Research Unit, RL USDA-ARS, 950 College Station Road, Athens, GA 30605, USA XX FH Key Location/Qualifiers FH FT source 1..2426 FT /organism="Campylobacter coli" FT /plasmid="p3386" FT /strain="338" FT /mol_type="genomic DNA" FT /db_xref="taxon:195" FT RBS 78..81 FT CDS 88..411 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="similar to hypothetical protein from Photobacterium FT profundum; ORF3; putative" FT /db_xref="UniProtKB/TrEMBL:Q4VGL9" FT /protein_id="AAY41939.1" FT /translation="MKRGFAKIEFFANLEYLKQEYNKGYVVSKILYEKAKQDKNISMVY FT SQFNKYFNEVFKNKIEKKEIIQENNQSLALENKEPIKLKIDTKSKKVFDAKFGKDIKED FT DLL" FT RBS 1200..1203 FT CDS 1211..1984 FT /codon_start=1 FT /transl_table=11 FT /product="putative Rep" FT /note="ORF1; similar to initiator RepB protein family" FT /db_xref="GOA:Q4VGL8" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q4VGL8" FT /protein_id="AAY41937.1" FT /translation="MTPREFRKRQLEKLEQRKIQTHQKISNDFIDNTISKNNLVCLKVM FT FYLSTVLEKEDLSTFDDENIMCVFVDTKQMLEYIGSNVKDIRNNLKQMQETSISFVDEK FT ENIVEGMNLLPLFKIEYGKNRTEIHLFKRIANMIVGVSKNYTFLNTKLLMDIKNKNTLR FT MAPLLYEINGYDKHTGKRKRMDLDALNDFFGTTYKRIIDIEKNILQPVKKELDLVSKLS FT FTYQVNFDTLNKVGRPRALAVTIDLKDNQGNLFAN" FT RBS 1884..1887 FT CDS 1994..2230 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF2; putative; similar to conserved protein of FT Campylobacter upsaliensis" FT /db_xref="UniProtKB/TrEMBL:Q4VGL7" FT /protein_id="AAY41938.1" FT /translation="MQKQYPEVHSLEESLAILKKYKDDLTKEQYEGIKSVICGHAIEDM FT FANEKDVIDMIKIAKDEANADEIIAEYKREWGV" XX SQ Sequence 2426 BP; 1015 A; 293 C; 343 G; 775 T; 0 other; aagcttcaat cattttatta aaatacacta taatttgcta aaatatacta aaatatctta 60 taatatacta ttttaaaagg atttgcaatg aaaagaggtt ttgcaaaaat agaattcttc 120 gctaatttag aatacttaaa acaagaatat aataaaggct atgtagtttc taaaatactt 180 tatgaaaaag caaagcaaga taaaaatata tcaatggttt attcacaatt taataaatac 240 ttcaatgaag tttttaaaaa taaaatagag aaaaaagaaa taatacagga aaataatcaa 300 tctttagctt tggaaaataa agaacctatc aaactaaaga ttgacacaaa atcaaaaaaa 360 gtatttgacg ctaaatttgg aaaagatatc aaagaagatg atttattata aaaatagctc 420 taaaatcgat ttttttcata tcagtaatac tttatattgt ttttttaatt aaaatcgatt 480 tttacccctt ttttgaaaga ataaacgcta ttaattagct tagcaaatcg caccttaaag 540 gtgctatgat ttgcggtaat tggggtaagg gggcgtgaag ttagcctaga gctaacgaac 600 ggacaagccc ccttcctaat gtatatcatc aaaaatgtct ttaagcaaaa acagtgtgaa 660 aaattaaact ctttgattta taaaaactat tataaaaact attatagggg tgtgaaaaag 720 tctgtcaaat gcctatttta taggtgtttc acaaaataat ttagtgattt tataatctaa 780 tttagtgatt ttataatcta atttagtgag aaaataagtt catttaagtt ttatataaga 840 aagcatacaa acactgatat aatggctatt tgagcctaaa aaaataattt acagactttt 900 taaggttaaa aactcactaa attatcaaac cgctataatt tcacatttta aacgaatttc 960 ttgtgaaatt cttaaaaaat ggctgtgaaa cattgaaaac cttaaaaatt acaaatgcct 1020 atttttccat tttagtgagt ataaagtatt tttagtgaga tttattttaa taactcacta 1080 aaattaatat atagttattt aaagcatttt tttaaaaaat atcaaaaaat aaagtgagtt 1140 attaatctta aaagcttact ttaagtaaag ttagtatata atttaaaaaa ctcactaaaa 1200 ggataaactt gtgacaccta gagaatttag aaaacgacaa ctcgaaaagt tagagcaacg 1260 aaaaatacaa actcatcaaa agataagtaa tgattttatt gataacacaa tcagtaaaaa 1320 taatctagtg tgtttaaaag ttatgttcta tctttctaca gttcttgaaa aagaggattt 1380 atctacattt gatgatgaaa atataatgtg cgtttttgta gatacaaaac aaatgctcga 1440 atatattggc tcaaatgtca aggatattag aaacaattta aaacaaatgc aagagactag 1500 tatcagtttt gtggatgaaa aggaaaatat tgtagaaggt atgaacttat tgcctttatt 1560 taaaatcgaa tatggaaaaa atcgcaccga aattcatctt tttaagcgta tagcaaatat 1620 gattgtggga gtaagtaaaa actacacttt tcttaataca aagcttttaa tggatatcaa 1680 gaacaaaaac actctaagaa tggcaccgct tttatatgaa ataaatggct atgataaaca 1740 tacaggaaaa agaaaaagaa tggatttgga cgctttaaat gattttttcg gaacgacata 1800 taagagaatt attgatatag aaaaaaatat tttacaacct gtaaaaaaag aactcgattt 1860 agtctcaaaa cttagcttta cataccaagt aaattttgac acattaaaca aagttggacg 1920 acctagagct ttagctgtaa caatagattt aaaagataat caaggaaatt tatttgctaa 1980 ttaaggagta aaaatgcaaa aacaatatcc cgaagtgcat agcttagaag aaagccttgc 2040 aatacttaaa aaatataaag acgatttaac taaagagcaa tatgaaggta ttaaatctgt 2100 tatttgcgga cacgctattg aagatatgtt tgcaaatgaa aaagatgtta tcgatatgat 2160 aaaaattgca aaagatgaag caaatgccga tgaaataatc gccgaatata aaagagaatg 2220 gggagtatga atgcaaaatg tcaaaagttg ccaccgctca ttgcaatcct aaaaaacaac 2280 ctgcataaat attttcttat ttgcaattta tttttttggc gtcctatttt agagctttag 2340 cgataaaact ttgtatttgt atagcaaata catatcctgt cttattactc caagcaatta 2400 taacaaaata taagctattt ttacaa 2426 //