ID AY665654; SV 1; linear; genomic DNA; STD; VRL; 5039 BP. XX AC AY665654; XX DT 08-SEP-2004 (Rel. 81, Created) DT 26-JUL-2005 (Rel. 84, Last updated, Version 2) XX DE Dendrolimus punctatus densovirus, complete genome. XX KW . XX OS Dendrolimus punctatus densovirus OC Viruses; ssDNA viruses; Parvoviridae; Densovirinae; Iteravirus; OC unclassified Iteravirus. XX RN [1] RP 1-5039 RX DOI; 10.1099/vir.0.80898-0. RX PUBMED; 16033964. RA Wang J., Zhang J., Jiang H., Liu C., Yi F., Hu Y.; RT "Nucleotide sequence and genomic organization of a newly isolated RT densovirus infecting Dendrolimus punctatus"; RL J. Gen. Virol. 86(Pt 8):2169-2173(2005). XX RN [2] RP 1-5039 RA Wang J., Zhang J., Hu Y.; RT ; RL Submitted (25-JUN-2004) to the INSDC. RL Microbiology, The College of Life Science, Wuhan University, Luojiashan, RL Wuhan, Hubei 430072, P.R. China XX FH Key Location/Qualifiers FH FT source 1..5039 FT /organism="Dendrolimus punctatus densovirus" FT /mol_type="genomic DNA" FT /country="China" FT /db_xref="taxon:292208" FT gene 328..2655 FT /gene="NS1" FT CDS 328..2655 FT /codon_start=1 FT /gene="NS1" FT /product="nonstructural protein 1" FT /note="helicase/ATPase and replication initiation motifs" FT /db_xref="GOA:Q66NY5" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="UniProtKB/TrEMBL:Q66NY5" FT /protein_id="AAU12253.1" FT /translation="MNAQSTSEQVIISEDINPDSVYAVLPNGIDVHHAPYTCNQNQCHN FT LTSQQIINIENVPTDRQQRSIDRNNEIVSVYEDSALTANEEFNNDGLDGDSGEDSISRR FT EDKVSARGLLATAEYTIRNSSIKRIIRGRFLRPDCGLSFPINNCRTVQMVNNAMVARAR FT NDGNRSTVGMPPISMELCNGNVYGNSYNTEGIFRQFYQCVKRRMERLGADLYETFRNNS FT RGTRRILHDSIEYEESRHGCFNTMVEKLIERLDKGNGCAIFFHESPDQKGEWPYPENIS FT RGYYPDFDFCVFKNDEVWNGKLAQEPTEEDSSDGREFGGRRWLDLEEYTYFHDSKIKKV FT NEVGKSWPFERSDLTPFPVPVKGHFHVLHACTWYNQECRCLSRHFDVNPRKNNALRSEC FT ISAEHIRNILLYNTKWPRWAIYIKVSNEEKFRFVYRTESVREEELRPIEQNELEGSSSP FT LEIRRKRDREGSSDGEHDCGRPNYKNSRSSQKGDSVQKIIRFIQQKPTWPLEHVFQTKE FT WLDGPFGTWVSSDKTVKRAIEIFSLQTMHYTYTQFVDYYRSLECNPIWAAPSFNGFTDY FT YHTLDESIDIIERLLNYQCEQDEYLSEMSQNDAKKVFINDLWDILEKKRPKQNTFQIIG FT EPSAGKNYFIDAILSFYLNTGIILNFNRFSQFPLMEAVNRRVNVWNEPNFEPAALDTIK FT MLLAGDPLKVNVKYQKEQYLQKTPIIVMTNKPVFPNDLAFHDRVCTYFWKRAPFLKEYH FT AKLHPMIWSYLVNTYVLESIDM" FT gene 494..1855 FT /gene="NS2" FT CDS 494..1855 FT /codon_start=1 FT /gene="NS2" FT /product="nonstructural protein 2" FT /db_xref="UniProtKB/TrEMBL:Q66NY4" FT /protein_id="AAU12254.1" FT /translation="MFQLIANKGLLTGIMKSLVSMKIVPSLQTKSLITTAWTETQEKIQ FT YLEEKIKSVQEDSSPLQNILYEIPQLSELLEEGFSDQIADYHFQLIIVELSKWLITQWS FT LEPETMETDPQLECLQSLWNSAMEMSMVTPIILKESSANFINVLKEEWNDSELTYMKLL FT ETIAEGPDAYFTIALNTKNQDMDALIQWWKNSSNALTKEMDALFSSMNRLTKKANGHTQ FT KTSQEDTTQISTSVSSKTTKCGTESLPKNPRKRIAVTEESSEDEDGSTSKNTPTFMTPK FT SKKSTKLEKAGRSKGQTLLPFQYQSKGTSTSYMPVLGTTKNVGASQGILTSIRERTMLC FT EANALAQNILETSCSITQNGRDGQFTLKCPTKKNSDLFIELNLYEKKNYDPSNKMNWKG FT ALVRLKFDVKETEREAQMVNMIVDAQTTRIQDHPKRETVYKRSSDLYNKNQHGH" FT gene 2745..4751 FT /gene="VP" FT CDS 2745..4751 FT /codon_start=1 FT /gene="VP" FT /product="viral protein" FT /db_xref="GOA:Q66NY3" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q66NY3" FT /protein_id="AAU12255.1" FT /translation="MPHLPGHKYIGPGTSDFKPIPIDSDDAIAREHDLAYLNADNNKDI FT YKADKTARDEFFSDFVHNNNYHSLIGGIGLGAKNLIEEHVLGNSLYGMGKRKNTEKDWA FT TIKRINRARAARRERENDLNQPDIRNFGHVAGENINPDEEVNLADFPDFLQDFVAEAGP FT SGTQPLETAQESPPVMSQENVPMDTEGATDVGGGAQVDPRSGGQAAGGMGGGGAANDGR FT QDIFAGAPQPNQNHELIYGKSYHFTLTNGLPDFRHAITNNAYSAQLRFKHIHGIPWERL FT LMYVSEGELLRLMRDYTALKVEEVVCEVYSLGVRLPFVTSATTSSVANANAQYPIGCFH FT FDNAYEIQYDATQVNDVINKALGAEWKNSTRPDTPVSTQWSETFPNISASSTSRDISNP FT VIVNYPLPFGVTNVPKDVGIYDYVEIKNGTTAYGKCWEKRFKPKNGILYAESTLLTSGT FT NVSIENPNVLMIPIPGLENGYFMNNNKIFERDDAQLRTPPKAYSATKYNRNRGIINETD FT VDYMGYHYFGEQKCAPQAMPKFMIGFVNIRNEDNSLLQAKWDIVVKTRIRLSGLQSTRE FT WISRTETIPPQWFTSQYSQFRFDNPFNFPLLNTSNIVKVPTNRPGMFSPNTPGRSNEEL FT NEKAIKDQKSLRHKSALLPLLEKPVTRSSKLNK" XX SQ Sequence 5039 BP; 1792 A; 932 C; 961 G; 1354 T; 0 other; tatttgcgat tttaccacac cctacacccc cagtactggc ccgtagcttc gctgtgtggt 60 acgaagtgcc gcttcgcggc accacacacg ggccagtact gggggtgtag ggtgtggtaa 120 aatcgcaaat aatttcgcat ctgcgcagtt tataagtagg tagtaacaga gcatgcatga 180 taaataggtg gtggcgtgat cgaatgacgc aaatcattga cctcgaatgc ttttagtgcc 240 gtgtgcaaca ataacaagat aataaataaa gataaagata aagatagaga gtataaatac 300 atatgggagt ggaaatattc tataatcatg aacgcgcagt caacaagtga acaagtaata 360 ataagtgaag atataaatcc agactcagtc tacgcagtgc tgccaaacgg tatagacgta 420 catcacgctc cttacacctg taatcagaac cagtgtcaca atttaacgtc gcagcaaata 480 ataaatattg aaaatgttcc aactgatcgc caacaaaggt ctattgaccg gaataatgaa 540 atcgttagtg tctatgaaga tagtgccctc actgcaaacg aagagtttaa taacgacggc 600 ttggacggag actcaggaga agattcaata tctagaagag aagataaagt cagtgcaaga 660 ggactcctcg ccactgcaga atatactata cgaaattcct caattaagcg aattattaga 720 ggaaggtttc tccgaccaga ttgcggatta tcatttccaa ttaataattg tagaactgtc 780 caaatggtta ataacgcaat ggtcgctaga gccagaaacg atggaaacag atccacagtt 840 ggaatgcctc caatctctat ggaactctgc aatggaaatg tctatggtaa ctcctataat 900 actgaaggaa tcttccgcca attttatcaa tgtgttaaaa gaagaatgga acgactcgga 960 gctgacttat atgaaacttt tagaaacaat agccgaggga cccgacgcat acttcacgat 1020 agcattgaat acgaagaatc aagacatgga tgctttaata caatggtgga aaaactcatc 1080 gaacgccttg acaaaggaaa tggatgcgct attttcttcc atgaatcgcc tgaccaaaaa 1140 ggcgaatggc catacccaga aaacatctca agaggatact acccagattt cgacttctgt 1200 gtcttcaaaa acgacgaagt gtggaacgga aagcttgccc aagaacccac ggaagaggat 1260 agcagtgacg gaagagagtt cggaggacga agatggctcg acctcgaaga atacacctac 1320 tttcatgact ccaaaatcaa aaaagtcaac gaagttggaa aaagctggcc gttcgaaagg 1380 tcagacctta ctccctttcc agtaccagtc aaagggcact tccacgtctt acatgcctgt 1440 acttggtaca accaagaatg tcggtgcctc tcaaggcatt ttgacgtcaa tccgagaaag 1500 aacaatgctc tgcgaagcga atgcattagc gcagaacata ttagaaacat cctgctctat 1560 aacacaaaat ggccgagatg ggcaatttac attaaagtgt ccaacgaaga aaaattccga 1620 tttgtttata gaactgaatc tgtacgagaa gaagaactac gacccatcga acaaaatgaa 1680 ctggaaggga gctctagtcc gcttgaaatt cgacgtaaaa gagaccgaga gggaagctca 1740 gatggtgaac atgattgtgg acgcccaaac tacaagaatt caagatcatc ccaaaaggga 1800 gacagtgtac aaaagatcat ccgatttata caacaaaaac caacatggcc attagaacat 1860 gtgtttcaaa caaaggaatg gcttgatggt cctttcggta catgggttag cagtgataaa 1920 acagtgaaac gcgctattga aatattttct ttgcaaacta tgcattatac ttatacacaa 1980 tttgtagatt actatagaag cctagaatgt aatcctatat gggctgctcc tagttttaat 2040 gggtttacgg attattacca cacactagac gaatctattg acattataga acgtttacta 2100 aactaccaat gtgaacaaga cgaatacctt tctgaaatgt ctcaaaacga tgctaaaaaa 2160 gtatttatca acgatttatg ggatattttg gaaaaaaaac gtcctaaaca aaataccttt 2220 caaattatag gtgagcctag tgctggtaaa aattatttta tagacgctat attgtccttt 2280 tatttgaata ctggaattat attaaacttt aatagattta gtcaatttcc acttatggaa 2340 gctgttaata gacgtgtaaa tgtatggaat gaacctaatt ttgaacctgc agctttagac 2400 accataaaaa tgttgttagc tggtgatcct ttaaaagtaa atgtaaaata tcaaaaagaa 2460 caatatttgc aaaaaactcc tataattgta atgacaaaca aacctgtatt tccaaacgat 2520 ttagcttttc atgatcgtgt atgtacctat ttttggaaac gagcgccatt tttaaaagaa 2580 tatcatgcca aattgcaccc tatgatatgg tcataccttg taaatacata tgtacttgaa 2640 tctattgaca tgtaatctaa tctgtttatg taatctaatc tatttgtgta atccaagatt 2700 ataaataaag gtgttaaaaa attacgcatt cagttttatt ccacatgccg cacttgccgg 2760 gtcataaata tattggtccc ggtactagtg actttaaacc tatacctata gatagtgacg 2820 acgctatagc tagagaacac gacttagctt atttaaatgc tgataataac aaagacatct 2880 acaaggcaga caaaacagca cgagacgaat ttttcagtga ttttgtacat aataacaact 2940 atcatagttt aattggtggt attggacttg gtgctaaaaa cctaatagaa gaacatgtac 3000 taggtaattc attatacggc atgggaaaaa gaaaaaatac tgagaaagat tgggctacaa 3060 ttaaacgtat taatagagca cgagcagcac gaagagaaag agaaaacgat ctaaatcaac 3120 cagacattag aaattttgga cacgtagctg gagagaatat aaacccagac gaagaagtaa 3180 atttggctga ctttccagac tttcttcaag atttcgtagc agaagcagga ccgagtggca 3240 ctcaaccttt agaaacagcg caagagtcac cacccgtaat gtctcaagaa aacgtaccaa 3300 tggatacaga aggagcgaca gatgttggag gaggagctca agttgatcca cgtagtggag 3360 gacaagcagc tggaggtatg ggaggaggtg gagcagccaa tgatgggaga caagacatat 3420 ttgcaggagc acctcaacca aatcaaaatc acgagctcat ttatggcaaa agttatcatt 3480 ttacacttac taatggttta cccgatttta gacatgccat tactaacaat gcctacagtg 3540 cacaattacg attcaaacat attcatggta taccatggga aagattatta atgtatgtaa 3600 gtgaaggtga attattacga ttaatgcgag actacacagc cttaaaagtt gaagaagttg 3660 tatgtgaagt atacagcttg ggagtacgtt taccatttgt gacatcagct actaccagtt 3720 ctgtagcaaa tgctaatgct caatatccaa taggttgttt tcattttgat aatgcatatg 3780 aaatacagta tgacgccact caagtcaatg atgtaattaa taaagcatta ggtgctgaat 3840 ggaagaattc cactcgccca gatacacctg tatccactca atggtctgaa acatttccta 3900 atataagcgc ttcaagtact agtcgtgata tttctaatcc tgtaattgtt aattatcccc 3960 ttccatttgg tgttacaaat gttcctaaag atgtaggaat atatgactat gttgaaataa 4020 aaaatggaac tacagcttat ggaaaatgct gggaaaaaag atttaaacca aaaaatggca 4080 tattatacgc tgaaagtaca ctattaacaa gtggtaccaa tgtaagtatt gaaaacccaa 4140 atgtattaat gatacctatt cctggactgg agaatggtta ttttatgaat aataacaaaa 4200 tttttgaaag agacgatgca caattgagaa cacccccaaa ggcatattca gctacaaaat 4260 ataatcgtaa tcgaggaata attaacgaaa ccgatgtaga ctatatgggt tatcattatt 4320 ttggagaaca aaaatgtgca ccacaagcta tgccaaaatt tatgattgga tttgtcaata 4380 ttcgtaatga agacaacagt ttattacaag caaaatggga cattgttgtt aaaactagaa 4440 ttcgtttatc tggtttacaa tctacaagag aatggatttc aagaactgaa actataccac 4500 cacaatggtt tacttcgcaa tattctcaat tccgatttga caatcctttc aatttcccac 4560 tattgaatac atcgaatatt gttaaagttc caacaaatag acccggcatg ttttctccaa 4620 atacacccgg tagaagtaat gaagaactaa atgaaaaagc tattaaggat caaaaatctt 4680 tacgtcataa atctgcattg ttaccattac ttgaaaaacc tgtaactcgc tcttctaaat 4740 taaataaata aaaatgtaaa ataaattaat attcaataaa tatatcttat ctatatcctc 4800 tttcatttac ctatatctat atataatata ataaaacaaa tcacgccacc acctatttat 4860 catgcatgct ctgttactac ctacttataa actgcgcaga tgcgaaatta tttgcgattt 4920 taccacaccc tacaccccca gtactggccc gtgtgtggtg ccgcgaagcg gcacttcgta 4980 ccacacagcg aagttacggg ccagtactgg gggtgtaggg tgtggtaaaa tcgcaaata 5039 //