ID AY508697; SV 1; linear; genomic RNA; STD; VRL; 7450 BP. XX AC AY508697; XX DT 01-AUG-2004 (Rel. 80, Created) DT 22-OCT-2004 (Rel. 81, Last updated, Version 2) XX DE Bovine enterovirus type 2 strain 3A, complete genome. XX KW . XX OS Bovine enterovirus type 2 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC Picornaviridae; Enterovirus. XX RN [1] RP 1-7450 RX DOI; 10.1099/vir.0.80159-0. RX PUBMED; 15483232. RA Goens S.D., Botero S., Zemla A., Zhou C.E., Perdue M.L.; RT "Bovine enterovirus 2: complete genomic sequence and molecular modelling of RT a reference strain and a wild-type isolate from endemically infected US RT cattle"; RL J. Gen. Virol. 85(Pt 11):3195-3203(2004). XX RN [2] RP 1-7450 RA Goens S.D., Botero S., Perdue M.L.; RT ; RL Submitted (18-DEC-2003) to the INSDC. RL Environmental Microbial Safety Laboratory, USDA-ARS, 10300 Baltimore Road, RL Beltsville, MD 20705, USA XX DR RFAM; RF00229; IRES_Picorna. DR RFAM; RF00386; Entero_5_CRE. XX FH Key Location/Qualifiers FH FT source 1..7450 FT /organism="Bovine enterovirus type 2" FT /host="bovine" FT /strain="3A" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:269638" FT 5'UTR 1..820 FT CDS 821..7321 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q69A11" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR003138" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="UniProtKB/TrEMBL:Q69A11" FT /protein_id="AAS86318.1" FT /translation="MGAQLSKNTAGSHTTGTYATGGSNIHYTNINYYENAASNSLNKQD FT FTQDPEKFTRPVVDVMKEAAVPLKSPSAEACGYSDRVAQLTLGNSTITTQEAANIVVAY FT GQWPETLSDTDATAIDKPTEPGVSAERFYTLPSVQWTEAFSGRYWKLPDALSDLGLFGQ FT NLQFHYLYRGGWAIHVQCNATKFHQGTLLVVAIPEHKIQAQQTPAFDRTNPGENGAEFR FT FPFTLEDGSALGNALIYPHQWVNLRTNNSATLILPYVNAIPMDSGIRHNNWTLAVIPVV FT PLAYATGSTTYVPITITVAPMATEFNGLRRAIAQGLPTMYTPGSGQFLTTDDFQAPCIL FT PKFQASPEIKIPGEVKNILEIVQVESLVEINNVEGQSGVARYRIPLSVQDAMDQQIMAL FT RVDPGIDGPLQSTLLGVFTRYYTQWSGSVEFTFMFCGTFMSTGKVVIAYTPPGGTAPTT FT RRDAMLGTHIVWDFGLQSSITLVVPWISSGHFRGVAADDSNFKYRYYETGFITMWYQTN FT LVVPPQFPNDASIIMLVAAQPNFSLRIMKDRPEMTQTAALQGETGLAIKQAVHKTVANT FT VESHHTVSTESTPALQAAETGATSNASDESLIETRNVVNTHSVAETSIEAFFGRSGLVG FT MAETIGGIGRWIVNFGEFVQVRAKLELFTYVRFDIELTIVGEVLDANSKVEHVPVKYQV FT MYVPPGATLPENQDTFQWQSSCNPSVISSTELPPARVAIPFMSTANAYSMSYDGYATFG FT DTGGANYGMVPSNYLGTIVFRTIEDLDGLKLKLRFYTKPKHVKCWIPRAPRAVPYKSRY FT SGVYDTVESFCANRANIKTTGAFGQQSGAVCVGSYRILNRHLATQADWNSVIWDSYERD FT LLVMRHDAAGSDTIARCSCTSGVYYCKSRNKHYPVVVTPPSLVHVGANDYYPERYQSHV FT LLGIGFAEPGDCGGILRCQHGCMGILTAGGNNLVAFADLRDLLWIEDDAMEQGLTDYVQ FT SLGNAFGAGFTDEISNYVGQVRDMMVGSDTVVEKIVRNIVKLLSALVIVVRNRSDIITV FT TATLSLLGCSGSPWRWLKSKICSILGINMAQKQADSWIKKFTEAVNAFKGLDWIAAKFS FT KFLDWIKSKIIPELRERTEFVKNLRQLPLLEAQINTLEHSNPNQETQEQLFSNVQYLAH FT HCRKNAPLYAAEARRVFALEKRVLGAMQFKTTNRLEPVCCLIHGTPGTGKSLATTIIGR FT KIAEYENSGVYSLPPDPDHFDGYAEQAVVIMDDLHQNPDGKDMSLFCQMVSTTPFVVPM FT AALEDKGRLFTSKYVLASTNANHIHPVTVADGKALQRRFHFDTDIELMDGYVKNGKLDI FT QKATEACDDCSPINFQKCMPLVCGKALQLRSKKGDGMRYSIDTMITEMRRESARRYNIG FT NVIEALFQGPPEFKPLRIDVSEETPAPPAIADLLASVDSEDVREYCRQKGWIVQEKITK FT ESLERNVNRALIVLQSATLIATICGVIYVVYKLFAGLQGPYSGIHTNYQKVKPVVRQVT FT TQGPLLDFAMSLLKKNIRTVVTKTGEFTGLGVYDTFMVLPRHAMAHGEVEIDGRKVGIE FT DAYDLNDITQTSLELTVLKLKQNEKFRDIRSLIPDQISETTEALVIVNTSAYPNLFMPV FT GAVKDYGYLNLAGRPTHRTLMYNFPTRAGQCGGVAVSMGKVIGIHIGGNGAQGFAAALL FT RRYFTQPQGEIEFMEKSKDAGYPIINAPTKTKLHPSVFFDVFPGEKEPAVLHKKDKRLE FT VDFEEALFSKYIGNIHKPVTEEMEIAIDHYANQLKQLDIDPTPISMEDAIYGTEGLEAL FT DLGTSAGYPYVALGIKKRDILNKETRDTSKMQQCIDKYGLNLPMVTYVKDELRSKEKVK FT KGKSRLIEASSLNDSVAMRCAFGNLYKAFHTNPGTLTGCAVGCNPETFWSKIPVMMDGE FT LFGFDYTAYDASLSPVWFQCLYLLLEKIGFGHCKHFIDQLCCSNHLFMDKRYVVVGGMP FT SGCSGTSIFNSMINNIIIRTLVLTVYKNIDLDDLKIIAYGDDVIASYPFELDAKLLADA FT GRSFGLIMTPPDKSAEFVKLTWDNVTFLKRSFVKDERFPFLIHPVMKMSDIHESIRWTK FT DAKSTQDHVRSLCLLAWHCGQEQYEEFLEKIRSVPVGRALSLPSFKALQRSWYDSF" FT 3'UTR 7322..7392 XX SQ Sequence 7450 BP; 1895 A; 1956 C; 1843 G; 1756 T; 0 other; tttaaaagag tcagggggtt gtacccaccc ctggggccca cgtggcgcta gtactctggt 60 acgccagtac ctttgtacgc ctgttttccc ctccctaaat aaattaagat taccactact 120 gaggggagta gtccgactcc gctccggcaa tgccgcacca gtgcactggt acgctagtac 180 cttttcacgg agtagatggt attcctcacc ccgaaactta gaagcacgaa aacaaaccga 240 ccaataggtg catggcatcc agccgtgtta tggtcaagca cttctgtttc cccggtccgc 300 aaggatcgtt acccgcccga cccactacga gaagcctagt aactgaccaa gtagttgaga 360 ggttgcgctc agccacaacc ccagtggtag ctctggaaga tggggctcgc acttcccccg 420 tggtaacacg gttgcttgcc cgcgcgtgct tccgggttcg gcctctgccg ttcacctcga 480 ttctgcgtaa tcagccaaga gcctattgtg ctgggacggt ttcctccggg gccgtgaatg 540 ctgctaatcc caacctccga gcgtgtgcgc acaatccagt gttgctacgt cgtaacgcgt 600 aagttggagg cggaacagac tactttcgga accccgtgtt tcctttgttt taattttaat 660 gctttatggt gacaattgtt gagatctgcg atctagcgac cttgccattg aacattgctt 720 tgtattattt ggttgcattc cacaaaacct ctgacatacc cagctcctat attgatcttt 780 tggtttatct aaacttaaaa cacaaactcg aaggattgcg atgggagcac aattgagcaa 840 gaatactgct ggatcacaca ctactggcac ttatgccact ggtgggtcga acatccacta 900 cacaaatatt aactactacg agaacgctgc ctcaaacagc ctcaacaagc aagactttac 960 gcaagaccca gagaagttca cgcgtcctgt agttgacgtg atgaaggaag cagctgtacc 1020 actcaagtca ccaagtgctg aagcctgtgg ttacagtgat agggtcgccc agctcacctt 1080 gggcaattcg accattacca ctcaggaggc agcgaacatc gttgtggcct atggacaatg 1140 gcccgaaacc ctatcggaca ctgacgccac cgcaattgac aaaccaactg aaccgggggt 1200 ctcagccgaa cgattttaca ccctaccgtc agttcagtgg accgaggcct tcagtggtag 1260 gtattggaag ctccctgacg ctctctccga cctcgggttg tttggacaaa acctgcagtt 1320 ccactaccta taccgcgggg gctgggcgat tcacgttcag tgtaatgcca ccaagtttca 1380 tcaaggaacc ctgcttgttg tggccatccc cgagcacaag atccaggcac aacaaacacc 1440 ggcgttcgat aggaccaacc ctggggaaaa cggtgctgag ttcaggttcc ctttcactct 1500 cgaggacggg agtgcgttag ggaacgccct gatctatcca caccagtggg tgaacctgcg 1560 caccaacaac tccgccacgc taatactccc ctatgtcaat gcaataccta tggactcagg 1620 gatccgccat aacaactgga cactagctgt tatcccggtt gtaccacttg catacgccac 1680 agggtctacc acttacgtac caatcaccat cacagttgcc cccatggcta ccgagttcaa 1740 cggtctcagg cgcgccattg cgcagggatt gcctacaatg tacacacccg gctctggcca 1800 gtttctcacc acggatgact tccaggctcc ctgcatccta cccaaatttc aagccagtcc 1860 cgagataaag atcccgggtg aggttaaaaa catactggag atagtccaag tggagtctct 1920 agttgagatc aacaacgttg agggccaaag cggcgttgca cggtaccgca ttccccttag 1980 tgtgcaggat gccatggacc agcaaatcat ggccctgcgc gttgacccgg gtattgacgg 2040 gccactccag tcaaccctgt tgggggtttt tacgagatac tacacccagt ggtctggatc 2100 cgtggagttt accttcatgt tctgtgggac ttttatgtcg acaggcaaag tggtcattgc 2160 ctacacacca cctgggggca cagccccgac cacgcgccgc gacgcgatgc ttggtactca 2220 cattgtttgg gactttggtc tacaatcctc aattacgctt gtggtcccat ggatctcctc 2280 cggccacttt aggggcgttg ccgctgatga ctccaacttt aaatacaggt actatgaaac 2340 agggtttatc actatgtggt accagaccaa ccttgtagtt ccccctcagt tcccaaatga 2400 tgcctccatt atcatgttag tcgccgctca accaaatttc tctcttcgca tcatgaaaga 2460 tcgcccagaa atgacgcaga cagcggcgct gcagggtgag accgggctgg ctataaagca 2520 ggcagtgcac aagacggttg ccaacactgt cgaatcccac cacaccgtga gcactgagag 2580 cacacctgct ttgcaggctg ctgaaaccgg cgccacttca aacgccagtg atgagagcct 2640 tattgagacc cgcaatgttg tgaacaccca ctcagtggcc gaaacatcta ttgaagcctt 2700 tttcggtcgc tctggacttg tagggatggc cgagacaatc gggggtattg ggaggtggat 2760 agtgaatttt ggtgagtttg tgcaagtgcg tgcgaagctt gaactcttca cttatgttag 2820 atttgacatt gagctgacta ttgtcggtga ggtgcttgat gcaaactcga aggtcgagca 2880 tgtgccagtc aaataccagg ttatgtacgt accgcccggt gctactctcc ccgagaatca 2940 ggacacattt cagtggcagt catcttgcaa tccctcagtc atttcgagca cagaactacc 3000 acccgccaga gtggcgattc ctttcatgag cacggcaaat gcgtacagca tgtcttatga 3060 tgggtatgcc accttcgggg acaccggtgg tgctaattac ggcatggtcc cttccaacta 3120 ccttgggacc attgtcttcc gcaccatcga ggacctggac ggtttgaaac tgaagcttag 3180 attttacacc aaacccaagc acgtcaagtg ctggatcccc agggcaccac gagcagtccc 3240 ttacaagtct cggtactcag gagtttatga tacagttgaa agcttttgtg ctaaccgggc 3300 caacatcaag actacagggg cattcggaca acagtctggt gctgtgtgtg tgggtagtta 3360 tcgaatcctc aacaggcact tggccactca agcagactgg aacagcgtga tatgggactc 3420 gtacgagaga gacctccttg taatgaggca cgatgcggcc ggtagtgata ctattgcgcg 3480 ctgcagctgt acctcgggtg tctactactg caaatcccga aacaagcatt acccggtggt 3540 agtgacaccc cccagtttgg ttcacgtcgg tgccaatgac tactaccctg agagatatca 3600 gtcacatgtt ctcctgggga tcggattcgc cgagccgggt gattgtgggg gcatccttcg 3660 gtgccagcac ggctgcatgg gtatactcac tgccggtggg aacaaccttg tggcgttcgc 3720 tgatttgcgc gatctgctct ggattgagga tgacgcgatg gagcagggct tgactgatta 3780 cgttcagagc cttgggaatg ccttcggtgc gggcttcacc gacgagattt ccaactacgt 3840 tggccaggtt agggacatga tggtgggttc cgatacagtg gtcgagaaaa ttgttaggaa 3900 cattgttaaa ctactgtctg ctctggtaat agtcgttagg aaccgtagtg atatcattac 3960 agtcaccgca accctctcac tcttaggctg ctctggatca ccatggcgct ggcttaagtc 4020 taagatttgc tccattcttg gaattaacat ggcacaaaag caggccgaca gttggatcaa 4080 gaagtttaca gaggccgtta atgcgttcaa aggccttgat tggattgcag ccaaattttc 4140 caagttcctc gactggatca aatccaagat catccctgag ctgagagaaa gaacggagtt 4200 tgttaagaac cttagacagc tcccactcct ggaagcccag attaacactc ttgagcactc 4260 caaccctaac caggaaactc aagaacagtt gttctcaaac gttcaatatc tcgcccacca 4320 ctgcaggaag aacgccccac tctatgcagc ggaggcgcgc agagtttttg ccctggagaa 4380 gcgtgtgctg ggagcaatgc agttcaagac cacgaatcga cttgaacctg tttgctgcct 4440 gatccacgga acacccggta ctggcaagtc gcttgcgact accatcattg gcagaaagat 4500 cgctgaatac gagaacagcg gagtttacag tctaccccca gacccagacc actttgacgg 4560 atacgccgaa caagccgtgg tgataatgga tgacttacac cagaacccag atgggaagga 4620 tatgagcttg ttttgccaga tggtctctac tacccccttc gtggttccta tggctgccct 4680 tgaggataag ggtagactgt ttacctctaa gtatgtgctg gcctcaacga atgccaacca 4740 cattcacccg gtcactgttg cagatgggaa ggcccttcag cggcgctttc acttcgatac 4800 agacattgaa ttgatggatg gctacgtgaa gaatggcaag ctagacattc agaaagcaac 4860 tgaagcctgt gacgattgct ccccgatcaa tttccagaag tgtatgcccc tcgtttgtgg 4920 caaggccctc caacttcgca gcaagaaggg tgacggcatg aggtatagta tcgacaccat 4980 gattacggag atgcgcaggg agtcagcgcg gcgttacaat attggcaatg taattgaagc 5040 gctcttccag ggaccccctg agttcaaacc gctgcgcatt gatgtgagcg aggagacacc 5100 cgccccacct gctattgcgg acctgcttgc cagtgtagac tctgaagatg tgagggaata 5160 ctgcagacaa aagggctgga tcgttcagga gaagatcacc aaggaaagcc tcgagcgcaa 5220 cgttaatcgc gctctcattg tattacaatc agccacgctc attgccacaa tttgcggtgt 5280 tatttacgtg gtgtacaaat tgtttgctgg gcttcaggga ccttactcag gcatccacac 5340 taattatcag aaagtgaaac ccgtagttag gcaggtcaca actcagggac ctctcctaga 5400 ctttgcaatg tctctcctga agaagaacat caggaccgtc gtgaccaaga ccggtgagtt 5460 caccgggctc ggtgtgtacg acaccttcat ggtccttccc cgccacgcca tggctcatgg 5520 ggaggttgag attgatggaa ggaaagtggg aattgaggat gcctacgacc tcaatgacat 5580 cactcagacc tcccttgaac ttacggtcct aaaacttaag cagaatgaaa agtttaggga 5640 tattagatcg ctaatacccg atcaaatttc tgagaccact gaggctcttg tgatagtgaa 5700 cacttcagct tatcccaacc tgtttatgcc agtgggggcc gtgaaggact atggctacct 5760 taacttggct ggaagaccca cacaccgcac gcttatgtac aacttcccaa caagggccgg 5820 ccaatgcggc ggagttgccg tatcgatggg caaggtcatt ggcatccaca ttggcggcaa 5880 tggcgcccag ggctttgcag ctgccctgct ccgtaggtat ttcacccaac cacaaggtga 5940 aattgagttc atggagaaga gcaaggacgc aggttacccc atcatcaatg ctcccactaa 6000 gaccaagttg catcccagtg tgttcttcga tgtttttcca ggcgagaagg aaccagcagt 6060 tctccacaag aaggacaaga gacttgaggt cgactttgag gaagccctct tttcgaagta 6120 cattgggaac atccacaagc ccgtgaccga ggagatggag atagcaattg accactatgc 6180 caaccagctt aaacagttag acatagaccc cactcctatt agcatggaag atgctatcta 6240 tggtacagaa ggcttggagg cacttgattt agggaccagc gcaggctacc cctacgtggc 6300 cctaggcatc aagaaaaggg acattctcaa taaggagact agggacacct ccaaaatgca 6360 acagtgcatt gacaagtatg ggctcaacct ccccatggtc acatacgtca aggacgagct 6420 cagatccaaa gagaaagtga agaagggcaa aagccgactc attgaagcgt cgagtctcaa 6480 tgattccgtt gcgatgaggt gcgccttcgg aaatctctac aaggcttttc acacgaaccc 6540 gggcacccta actggatgtg ccgttggatg taaccctgag accttctgga gcaagatccc 6600 agtcatgatg gacggagagc tttttggctt cgactacact gcgtacgatg ccagcctctc 6660 ccccgtctgg ttccagtgcc tctacctgct tcttgagaag attggcttcg ggcactgtaa 6720 acattttatt gatcaactgt gctgctccaa ccacctgttt atggataaga ggtatgtcgt 6780 cgtcggcggc atgccctcag gctgttcagg caccagcatt tttaacagca tgattaacaa 6840 catcattatc agaaccttgg tgctaactgt atacaaaaat attgacctgg atgatctaaa 6900 gattatcgcg tatggtgatg acgtgattgc ctcttacccc ttcgagcttg atgcaaagct 6960 gctcgccgat gccgggagga gcttcggtct catcatgaca cccccagaca agagtgctga 7020 atttgtcaaa ttgacctggg acaatgtgac ctttctcaag agatcgttcg tcaaagacga 7080 gcgctttccg ttccttattc atccggtcat gaagatgtca gatattcatg agtccatccg 7140 ctggaccaag gatgctaaat ctacccagga tcatgttagg tccctgtgct tattggcttg 7200 gcactgtggg caagaacaat acgaggagtt tctggagaaa atccggagtg tgcccgtggg 7260 ccgggcactt tcgctgccct cctttaaagc actgcagcgc tcttggtatg actcctttta 7320 actcaattcc aatttgaatt atccggtcta atcagattct aattggcgca atacacccgc 7380 cggatggggt gtaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 7440 aaaaaaaaaa 7450 //