ID AY465897; SV 1; circular; genomic DNA; STD; PRO; 5501 BP. XX AC AY465897; XX DT 01-JUN-2004 (Rel. 80, Created) DT 26-AUG-2005 (Rel. 85, Last updated, Version 2) XX DE Vibrio fischeri plasmid pES213, complete sequence. XX KW . XX OS Aliivibrio fischeri OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; OC Aliivibrio. OG Plasmid pES213 XX RN [1] RP 1-5501 RX DOI; 10.1016/j.plasmid.2005.01.003. RX PUBMED; 16122560. RA Dunn A.K., Martin M.O., Stabb E.V.; RT "Characterization of pES213, a small mobilizable plasmid from Vibrio RT fischeri"; RL Plasmid 54(2):114-134(2005). XX RN [2] RP 1-5501 RA Dunn A.K., Martin M.O., Stabb E.V.; RT ; RL Submitted (14-NOV-2003) to the INSDC. RL Microbiology, University of Georgia, 824 Biological Sciences Building, RL Athens, GA 30602, USA XX FH Key Location/Qualifiers FH FT source 1..5501 FT /organism="Aliivibrio fischeri" FT /plasmid="pES213" FT /strain="ES213" FT /mol_type="genomic DNA" FT /db_xref="taxon:668" FT CDS join(5139..5501,1..624) FT /codon_start=1 FT /transl_table=11 FT /product="ORF1" FT /db_xref="InterPro:IPR011664" FT /db_xref="UniProtKB/TrEMBL:Q6JHS7" FT /protein_id="AAS45621.1" FT /translation="MDMTTAPLVPYKKPYLSSSQLCKKLIDQGLIIDDEDFAEKVLNRC FT SYYRFKAYLSPFKDKGTKKFSEHTTFHNGYELYMFDSELRSYIFDIIEKVEIGVRSALD FT QWITKQTDNPFWYLDASLFKSNGQQVKTVSRVRDMFVDSKEEYAKHYQEKYYNEYCPFY FT RDLPPAWVAIELMTFGNVVKLIQNISDDKIQSLKMDRFSKKFNIQKFQTLISWMNVLHQ FT MRNYCGHHNRLFNRNFPAPTAIKKSLSDAIPLVRTKPNPDKREEDQLNRLYTALAALQC FT IYSGLGFDEKIGPKISDLFDNYTTTQRFSLSMGFPNGWKEEPLFFDL" FT CDS 823..1662 FT /codon_start=1 FT /transl_table=11 FT /product="ORF2" FT /db_xref="UniProtKB/TrEMBL:Q6JHS6" FT /protein_id="AAS45622.1" FT /translation="MPPPKGRSFPFAPRHSADWLVSHVTYDQAVDMFFNQTATQQNLGH FT DPLVYSKVFRGVTYATLQEAQQVFTETMNAEYEVREQRDLADENRGCKASKILNDNIRN FT RIVPTEDGLESLTAYRKPFGEKCVSPLSLFTKSLNGGSNSHIQANETQAQLVTQQAYDF FT PLVTKGSKAIQALDDSWGLQCSLEDELNQNHQDVVILDLEDSHKLLNNFWVDLGKDTAL FT IATSLNTANGWFQHTTPIFDAKGLVKQFGDINIKADIVESKGKQFIAFSGKKNGKEI" FT CDS 1693..2070 FT /codon_start=1 FT /transl_table=11 FT /product="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q6JHS5" FT /protein_id="AAS45623.1" FT /translation="MNGKKYPINSPKVQQVGLSPKARANGFKGAGVLTFVVSAAIATTD FT LVFKDDYHLVDWFGNVGADMFKALLQFGAGEAILFGIIAMTGYVTLGLIAVFFVYVSIE FT WIWSEYKVNDEVVKGLESVIS" FT CDS 2072..2488 FT /codon_start=1 FT /transl_table=11 FT /product="ORF4" FT /db_xref="UniProtKB/TrEMBL:Q6JHS4" FT /protein_id="AAS45624.1" FT /translation="MRFLGIVFIPLLILLWWIPTNGVLGDYQDLLNQTDEVRLSLITLI FT VPIGGFIPLLISVALISIAIYSGKQARLVIGEKWTSTINRTCIYSMILGVVFAVVFALY FT CIKLLDENGYEYSYNLTQITPTGIHLMYVKSHKE" FT CDS 2585..2863 FT /codon_start=1 FT /transl_table=11 FT /product="ORF5" FT /db_xref="UniProtKB/TrEMBL:Q6JHS3" FT /protein_id="AAS45625.1" FT /translation="MPRCEKTKPASLVFSKYLTTFRRRCKSFHDRSYHIRTASISKQSV FT VGFRVTRVVGQHHAVGFHTIFRPDTGRETSVTSDNAHQMSGLKQELA" FT misc_feature 2589..2706 FT /note="region of similarity to Vibrio shiloi plasmid FT sequence Z10rZ9, GenBank Accession number AF009904" FT CDS 3200..3442 FT /codon_start=1 FT /transl_table=11 FT /product="ORF6" FT /db_xref="UniProtKB/TrEMBL:Q6JHS2" FT /protein_id="AAS45626.1" FT /translation="MKVAATSISELSPLSFLMCEQAKRVSWVDYLLLWIDADQLNVLFS FT SFGNFFNSALAALAMVSRFNFSLFLLKIVSKAWSL" FT gene complement(3286..3609) FT /gene="orf7" FT CDS complement(3286..3609) FT /codon_start=1 FT /transl_table=11 FT /gene="orf7" FT /product="ORF7" FT /db_xref="UniProtKB/TrEMBL:Q6JHS1" FT /protein_id="AAS45627.1" FT /translation="MKKRRFTQEDRTLIELQIEKGVARKEAAKAIYEKVYGLKPRDFAL FT IDSLCSSNGEDYRDQAFETIFKRNREKLKRLTIARAARAELKKLPKEEKSTFSWSASIH FT KRR" FT misc_feature 3701..3702 FT /note="oriT' nick site" FT gene complement(3784..4149) FT /gene="traZ" FT CDS complement(3784..4149) FT /codon_start=1 FT /transl_table=11 FT /gene="traZ" FT /product="TraZ" FT /db_xref="UniProtKB/TrEMBL:Q6JHS0" FT /protein_id="AAS45628.1" FT /translation="MNKPKSKTHLVSVRVDGRVNAEIEELLNDTHKDKAELLRALLVRG FT LFAYKRDLYQTHGDRVHHSIDKSYYAYEREMLDDDLHYIATRFDQLEAMIREHKEPVLT FT PTKKEGKKTLLDSFFKK" FT gene complement(4142..4381) FT /gene="traY" FT CDS complement(4142..4381) FT /codon_start=1 FT /transl_table=11 FT /gene="traY" FT /product="TraY" FT /db_xref="UniProtKB/TrEMBL:Q6JHR9" FT /protein_id="AAS45629.1" FT /translation="MKKKTPLEKELLSYTKKHQTKSKTAVITELYDVITILMSEGISLE FT HIVAFLKTKNITVSRDYLKTVLYRIRQKRKLENE" FT misc_feature complement(4577..4578) FT /note="oriT nick site" XX SQ Sequence 5501 BP; 1635 A; 961 C; 1125 G; 1780 T; 0 other; ttatttaaga gcaatggcca acaagtaaaa acggttagca gggttaggga tatgtttgtt 60 gactctaaag aagagtacgc aaagcactat caagaaaagt attacaatga gtattgtccg 120 ttttacagag atctcccgcc tgcatgggta gccattgagt taatgacttt cggcaacgta 180 gtgaagttaa ttcaaaacat cagtgatgat aaaattcaat cacttaagat ggatagattt 240 tctaagaagt tcaatattca gaaatttcag acattaatta gttggatgaa tgtgctgcac 300 cagatgagaa actactgtgg gcatcataac cgactgttta atcgaaactt ccctgctcca 360 acagcgatta aaaagagctt gtctgatgca attcctcttg tcaggaccaa accaaatcca 420 gataagcgtg aagaggatca gttaaaccga ctttatacag ctcttgctgc attacaatgt 480 atatattcag ggcttggttt cgatgaaaaa ataggaccaa aaatctctga tttatttgat 540 aattatacaa caacacagcg gtttagctta tcaatgggtt tccctaatgg ttggaaagaa 600 gagccgcttt tttttgattt ataatcgcta tacttaacat aaaacccgtt ctacgaatcg 660 taaaaggtcg cctatttagg tggccttttt ttatgaaaac tgttttttaa gtgataaaaa 720 tgtcgtttgt cctaacgaaa tagtattttt aacaggctta ttcaggcgtt ttgattttta 780 gctatctggt aatatttaat tattttttat tggagtttgt atatgccgcc acctaaaggt 840 cgaagttttc catttgcacc gcgtcactct gctgattggt tagtgagtca tgtaacgtat 900 gaccaagccg ttgatatgtt ttttaatcag accgcaacac aacagaattt ggggcatgat 960 cctttagttt attcaaaagt atttagaggt gtgacatacg caacgctcca agaagctcaa 1020 caagtgttta ctgaaacgat gaatgcagag tatgaagtga gagagcaaag ggatttagca 1080 gatgaaaatc gagggtgtaa ggcttctaaa attctcaatg ataatattcg gaatcgtatt 1140 gtaccaacag aggatggttt agagtcatta actgcatatc gaaagccttt tggtgaaaag 1200 tgtgtatctc ctctttcttt gtttaccaaa tcgttaaatg gcggttcaaa cagtcatatt 1260 caagcaaacg aaactcaagc tcaattagtt acgcaacaag cttatgattt cccactcgtc 1320 actaaaggtt ctaaagcgat tcaggcatta gatgattctt ggggtttaca gtgctcttta 1380 gaggatgaat taaaccaaaa tcaccaagat gttgttattt tagatttgga agactcacat 1440 aaattattaa ataatttttg ggtggattta ggcaaagata cagcgttaat agcaacaagt 1500 ttaaatacgg ctaacggttg gtttcaacat acaacaccga tatttgatgc taaaggttta 1560 gttaagcaat tcggcgatat aaatattaaa gcggatattg tagagagtaa ggggaaacag 1620 tttattgctt tctctggtaa gaagaacggc aaagaaattt aacacgcact tgttaatggc 1680 actcgaatta acatgaacgg taagaagtac ccaattaaca gccctaaagt tcaacaagtc 1740 ggtttgagtc ctaaagcacg agcaaatgga tttaaaggcg caggtgtatt gacgtttgtg 1800 gtatcggcag cgatagcaac gacagatctt gtttttaaag acgattatca cttagttgat 1860 tggttcggta atgttggggc agatatgttt aaggcattgc tacagtttgg tgcaggagag 1920 gctatattgt ttggaattat tgcgatgact ggttacgtta ctctgggctt gattgctgtg 1980 ttttttgtct atgtgtctat tgagtggata tggagtgaat acaaggtaaa tgatgaggta 2040 gttaagggat tagaaagtgt tatcagttaa aatgaggttt ttaggaatag tatttatacc 2100 tttattgatt ttactttggt ggatacctac aaatggagtc ttgggggatt accaagattt 2160 attaaatcag acagatgaag ttagattatc actgataaca ttaatcgtcc ccattggtgg 2220 ttttatccct ttacttattt ccgttgcttt aatttctatt gctatttatt cggggaaaca 2280 agctcgtttg gtcattggtg aaaaatggac tagtactatc aatagaacgt gtatttatag 2340 catgatatta ggtgtagtat ttgcggttgt atttgcacta tattgtataa aattgcttga 2400 tgaaaacggt tatgaataca gttataacct aacccaaata accccgacag gtattcattt 2460 aatgtatgta aaatcacaca aagaatagaa acaaaaaagc cactcaaaag agtggctttt 2520 ttgtctatga accagaggat cataaaattg atcattgaga tcttgagcat ttagccgtaa 2580 ccttatgccc agatgtgaaa aaaccaagcc tgcaagcttg gttttttcga aatacttaac 2640 tacgtttaga cggcgttgta agtcctttca tgatagatca tatcacataa gaactgcaag 2700 tatttccaag caatcagtgg ttgggtttag agtcactagg gttgtgggac agcatcatgc 2760 ggttggtttt cataccatat ttcgcccaga tactggacga gagactagcg taacatccga 2820 taacgcacac caaatgagtg gactgaagca agaactagcg taagcagcta ggcaaagagg 2880 cttgtagatt ggggaaaccc ttgcaaggta ctgatgcaga ggtcggcaga gaacggtgag 2940 gatgggggca atacagcccg taatctctgc acttgaatag tgtattagaa ttcaagcgaa 3000 tgatggcgat gaacggctcc agtcggcaag caatcagggt tcacactaga gtgataaact 3060 tagcgaaagc ggttatcctc tagggtgagt attaccgaaa tctagctcaa aactcaccta 3120 tcagcataca tgccgacttc ttttgctctt caattcaaaa agaattaaaa agaaaatatt 3180 aagagctgca cgattagaaa tgaaagttgc cgcaacgagc ataagcgagt taagcccact 3240 ttcttttcta atgtgcgaac aagcgaagcg cgttagttgg gtcgattatc ttcttttatg 3300 gatcgatgct gaccaactga atgtgctttt ttcttctttc ggtaactttt tcaattccgc 3360 tctcgctgcc cttgctatgg tgagtcgttt taatttttct ctgttccttt tgaaaatcgt 3420 ttcaaaggct tggtctctat aatcttcacc gttgctgctg cagagtgaat ctataagagc 3480 aaagtctctt ggcttgagtc cgtatacttt ttcataaatt gctttggccg cttcttttcg 3540 tgccactcct ttttctattt gtagttcaat aagagtgcgg tcttcttgag taaatcgtct 3600 tttcttcatt ctcttttttg ctcttaggtt tcaaaggaca tcctttggcg cggcatgttt 3660 ttccaaatac gtatgtagag ggtgaaaacg tgcccgtcgt gcctatctaa aaaatagata 3720 tcactgagta atcaataata aaatgctaac tccttgtatt aatacgttaa tttatgggta 3780 acgttatttt ttaaagaaac tatccaaaag cgtctttttt ccttcttttt tcgttggtgt 3840 taataccggc tctttatgct ctcttatcat ggcttctagt tggtcaaaac gagtggcgat 3900 gtaatgtaag tcatcatcaa gcatttctct ttcgtaggcg taatacgatt tatcaattga 3960 gtgatgcact ctatcgccat gagtttgata caaatccctt ttataggcga acaaacctct 4020 tactagcaac gcccttaaca gttctgcttt atctttatgc gtgtcgttta acagctcttc 4080 aatttcagca ttcactcgac catccactcg aacggacacc aaatgagtct tggattttgg 4140 tttattcatt ttctagtttt ctcttttgcc taattcgata aagaaccgtc ttcaaatagt 4200 ctctcgatac cgtgatattt tttgtcttta aaaacgcaac gatgtgctct agtgagatac 4260 cttcactcat caagatggtt atcacgtcat ataactccgt aatgacggcg gttttagatt 4320 tcgtttgatg ctttttcgtg tacgaaagaa gctctttttc taacggtgtt ttctttttca 4380 ctgaatactt tattgattac tgattgatac tttagagact agcaataaaa aagaagaacg 4440 agaatggtta tttcagttgg gctgaaattg gcatgattta tcttagtaac ctacctataa 4500 actcattgat tcaatgggtt agctttttaa tgttagttac gttgtgatta cccgttgatt 4560 tctattttca agataggcac gacggggacg ttttcacccc ctgctacgca ttggataaaa 4620 acatcccgtg ccaaaggtga aacctttgaa accctgacgc acttcgtttg tctccagtac 4680 gcccaaaaaa gccagctacg cttcgggctt tttcgagcgc accggctaat tgttgaaaat 4740 agacgttaca gggtgattat tgattgaaac ggattgtgat tttattgccc tgtaaatcgc 4800 ctagaaagcg tcataaactt tcaaactggt tttggggtat gttggtgtgg tttatatctt 4860 aaaaacgcct ctatgggctt ctgaggctgc gaaggcatgg tttttatagg ctaacttacg 4920 gatttaacat aaggggcata atgaacacca attttgtgcg tacctagatt caacacaaga 4980 caacctactt cacccgcggg gatcttaggt tctgcgttac ggagtcacgt gattgaaaat 5040 aactggactc tgtatatgta acatgtataa ttaacttaac aatgacttcc tcctgaacgc 5100 aagttcgtaa gagtggaagt tttttttgcc tagagaaaat ggatatgact acggctcccc 5160 tcgttcctta taaaaaacct tacctatcta gttctcagtt atgtaaaaaa ctcatagacc 5220 aagggctaat cattgatgat gaagattttg ctgaaaaagt cttaaatcgt tgtagttact 5280 atcgatttaa agcttatcta tcacccttta aagataaagg gactaagaaa ttttcagaac 5340 atactacgtt tcataatggt tatgaacttt atatgtttga tagtgagttg cgaagttata 5400 tctttgatat aattgaaaaa gttgagatag gcgttcgttc ggcgctagat cagtggatta 5460 cgaaacaaac agataatcca ttctggtatt tagatgcatc t 5501 //