ID AY438025; SV 1; circular; genomic DNA; STD; PRO; 6054 BP. XX AC AY438025; XX PR Project:PRJNA16372; XX DT 15-OCT-2004 (Rel. 81, Created) DT 02-FEB-2012 (Rel. 111, Last updated, Version 6) XX DE Buchnera aphidicola BCc plasmid pLeu-BCc, complete sequence. XX KW . XX OS Buchnera aphidicola BCc OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Buchnera. OG Plasmid pLeu-BCc XX RN [1] RP 1-6054 RX DOI; 10.1016/j.gene.2005.10.043. RX PUBMED; 16413149. RA Gil R., Sabater-Munoz B., Perez-Brocal V., Silva F.J., Latorre A.; RT "Plasmids in the aphid endosymbiont Buchnera aphidicola with the smallest RT genomes. A puzzling evolutionary story"; RL Gene 370:17-25(2006). XX RN [2] RP 1-6054 RX DOI; 10.1126/science.1130441. RX PUBMED; 17038625. RA Perez-Brocal V., Gil R., Ramos S., Lamelas A., Postigo M., Michelena J.M., RA Silva F.J., Moya A., Latorre A.; RT "A small microbial genome: the end of a long symbiotic relationship?"; RL Science 314(5797):312-313(2006). XX RN [3] RP 1-6054 RA Gil-Garcia R., Perez-Brocal V., Ramos S., Latorre A.; RT ; RL Submitted (14-OCT-2003) to the INSDC. RL Institut Cavanilles de Biodiversitat i Biologia Evolutiva, Universitat de RL Valencia, Poligono La Coma, s/n, Paterna, Valencia 46980, Spain XX DR GR; AY438025_GR. XX FH Key Location/Qualifiers FH FT source 1..6054 FT /organism="Buchnera aphidicola BCc" FT /plasmid="pLeu-BCc" FT /host="Cinara cedri" FT /strain="BCc" FT /mol_type="genomic DNA" FT /db_xref="taxon:372461" FT gene 1..1551 FT /gene="leuA" FT CDS 1..1551 FT /codon_start=1 FT /transl_table=11 FT /gene="leuA" FT /product="2-isopropylmalate synthase" FT /note="LeuA" FT /db_xref="GOA:Q5WQ01" FT /db_xref="HSSP:1SR9" FT /db_xref="InterPro:IPR000891" FT /db_xref="InterPro:IPR002034" FT /db_xref="InterPro:IPR005671" FT /db_xref="InterPro:IPR013709" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:Q5WQ01" FT /protein_id="AAR99732.1" FT /translation="MNEKIIIFDTTLRDGEQALLTSLTSNEKIQIALALERLGVDVIEV FT GFPVSSPGDFKSVQMLSKIIKNSKICSLARCLPNDITIAADAMQFSKNFRIHLFLGTSD FT LHVSSKLKKNFNEIIEMAVASVKQAKKFTNDIEFSCEDAGRTTLQNLYCIIEAVIKAGA FT TTVNIPDTVGYTTPTQFKKIITMLFNHVKNIHQAIISVHCHNDLGMAVANSISAVEAGV FT RQIEGTMNGLGERAGNAALEEVIMTLNVHKNSLKVSTDINIKEIHRTSKIVSQFCNTPI FT PLNKAIIGKNVFSHSSGIHQDGVLKNRKNYEIIDPNSIGFTDYCSLNLTSRSGRAAVKH FT HMKKMGYENSDYNLNELYIDFLKLADKKGRIFDYDLEALAFFKKQQNTEEYYKLEYFDV FT QSKLSGLSTAYIVLICGSQTNIQKATTYNGPVDAIYQALNKATLYSIVLKKFHLEANGE FT GKDALGKVNIIVQYKLRNFHGVGLATDIIEASAQAMVNVLNYIWKSQQVNKELERLQK" FT gene 1600..2445 FT /gene="repA1" FT CDS 1600..2445 FT /codon_start=1 FT /transl_table=11 FT /gene="repA1" FT /product="replication-associated protein" FT /note="RepA1" FT /db_xref="GOA:Q5WQ00" FT /db_xref="InterPro:IPR003446" FT /db_xref="UniProtKB/Swiss-Prot:Q5WQ00" FT /protein_id="AAR99733.1" FT /translation="MFKRKKYVDNPYPKFVQPKNHKKRPAFIRYAMRCAAQTDVARNEL FT YYTNPLKNPITGCVLHRKRRLNEHRARALRAVVQAMLYYFNIASMLVMASVEKLSDVCG FT LSTYSSAGNKSITRASRLITQFMEPMGLISCEKIWDKILGMYIPKIIYLKPLFFMLFDI FT SKIRLKRVRIKQLEWINSQLKKKGEYPITLLEIEKQAKEKHIHSALLFRKSKYIIKKQK FT NKAKKFLELDEKYAKSYILNNLVKKYSTKELCKLGLTKLKRKVNCEYFRLKKLAQLPVV FT " FT rep_origin 2446..2772 FT gene 2773..3876 FT /gene="leuB" FT CDS 2773..3876 FT /codon_start=1 FT /transl_table=11 FT /gene="leuB" FT /product="3-isopropylmalate dehydrogenase" FT /note="LeuB" FT /db_xref="GOA:Q5WPZ9" FT /db_xref="HSSP:1CNZ" FT /db_xref="InterPro:IPR001804" FT /db_xref="InterPro:IPR004429" FT /db_xref="InterPro:IPR019818" FT /db_xref="InterPro:IPR024084" FT /db_xref="UniProtKB/Swiss-Prot:Q5WPZ9" FT /protein_id="AAR99734.1" FT /translation="MKKKKEYRIAVLPGDGIGPEVMQEAYKILNVINKKFDFNIYTNEY FT DIGGIAIDKYGAPLPKKTLNGCIESHAILFGSIGGKEWTHLPADEQPERGGLLPLRKFF FT NLFVNLRPIKLHFSLKKLSPLKKEIIQDGFDILCVRELIGGIYFGLPKGKNTFDKKNIS FT AFDTEIYSTKEIEKIADIAFQLSLKRKKKVFSIDKANVLESSMLWREVVIQVSKRYPNV FT ELIHLYIDNAAMQLIKNPNQFDVILCSNLFGDILSDECAALTGSLGMLPSASLNESFFG FT LFEPAGGSAPDLKGKNIANPIAQILSLALLFKYSLQLEKISHLIELSVLKTLEKGYRTL FT DISNGKKYITTDQMGNYIAKTLSELIN" FT gene 3876..5267 FT /gene="leuC" FT CDS 3876..5267 FT /codon_start=1 FT /transl_table=11 FT /gene="leuC" FT /product="3-isopropylmalate dehydratase large subunit" FT /note="LeuC" FT /db_xref="GOA:Q5WPZ8" FT /db_xref="InterPro:IPR001030" FT /db_xref="InterPro:IPR004430" FT /db_xref="InterPro:IPR015931" FT /db_xref="InterPro:IPR015932" FT /db_xref="InterPro:IPR015936" FT /db_xref="InterPro:IPR015937" FT /db_xref="InterPro:IPR018136" FT /db_xref="UniProtKB/Swiss-Prot:Q5WPZ8" FT /protein_id="AAR99735.1" FT /translation="MKTTLYQKIFDSHLIYEDKNTTPIIYIDLHLIHEVTSPQAFDGLR FT LKKRLVRNPLKTFATMDHNVSTISRKISDSKKMAKIQMRTLIKNCKDFNIPLYDLKNIN FT QGIVHVIGPEQGMTLPGMTVVCGDSHTSTHGAFGALAFGIGTSEVEHVFATQTILQNRM FT KNMRISIYGNIKKNIFSKDIILNIINKIGTSGGTGYVVEFSGSVIKKMSMESRMTICNM FT AIEMGAKSGIIEPDAITYNYLKNKNFVPKNRSWKEYIRKWNNLKSGPKSFFEQDFSINI FT SHISPQITWGTNPSQVIPINGKIPILKDIQDVNVREDTERSLEYMGLKPGTSLLNIPVD FT KVFIGSCTNSRIEDLRVVASVVQNKKISDNIEALIVPGSGLVKKQAEKEGLDKIFKNAG FT FQWRHAGCSMCLGMNEDQLKPYERCASTSNRNFEGRQGPKGRTHLMSPWLAAQTALYGK FT FVHIA" FT gene 5318..5923 FT /gene="leuD" FT CDS 5318..5923 FT /codon_start=1 FT /transl_table=11 FT /gene="leuD" FT /product="3-isopropylmalate dehydratase small subunit" FT /note="LeuD" FT /db_xref="GOA:Q5WPZ7" FT /db_xref="InterPro:IPR000573" FT /db_xref="InterPro:IPR004431" FT /db_xref="InterPro:IPR015928" FT /db_xref="InterPro:IPR015936" FT /db_xref="InterPro:IPR015937" FT /db_xref="UniProtKB/TrEMBL:Q5WPZ7" FT /protein_id="AAR99736.1" FT /translation="MKNFIQHIGVLVPLDISNIDTDIIIPKQFLQKITRTGFGKHLFFN FT WRFKDSEGKIKNDKFILNHDNYRKASILLTRENFGCGSSREHAVWALMDYGFKVIIAQS FT FSDIFVNNCLNNRLLLISLSKKHIEKLFFITQHKKRKICLIDLLKEKIIVDKYNISFKI FT DFIQKQSIMYGFDNIDYTLKHKKKIDLYEKKKNKYVFF" XX SQ Sequence 6054 BP; 2319 A; 718 C; 934 G; 2083 T; 0 other; atgaacgaaa aaataattat ttttgacact actttacgcg atggcgaaca ggcgttgcta 60 actagtttaa cgtctaatga aaaaattcag atagctttag ctttagaacg tttgggagta 120 gatgtaattg aggtgggttt tcctgtttcc tctccgggag attttaaatc ggtacaaatg 180 ctttctaaaa ttataaaaaa cagtaagatt tgtagtttag ctcgctgttt accaaacgat 240 ataactattg cagcggatgc tatgcaattt tcaaaaaatt ttagaattca tttattttta 300 ggcacttctg atttgcatgt atcttctaaa ttaaaaaaaa attttaatga aataattgag 360 atggcagttg cttcagtcaa acaagcaaaa aaatttacga atgatattga attttcgtgc 420 gaagatgctg gtcgaactac attacaaaac ttatattgta ttattgaagc tgtaattaaa 480 gcgggtgcaa ctactgttaa tattccagat actgtaggat atactactcc aacccaattc 540 aaaaaaataa ttactatgtt atttaatcac gtaaaaaata tacatcaagc aattatttct 600 gtacattgtc ataatgattt aggaatggct gtagcgaact ctattagtgc tgttgaggct 660 ggagtgagac aaattgaagg aactatgaat ggtttgggag aacgtgctgg aaatgctgct 720 ttagaagaag ttattatgac attaaatgtc cataaaaatt ctttaaaagt ctctactgat 780 attaatataa aagagattca cagaaccagt aagatcgtta gtcaattttg caatacaccg 840 attcctttaa ataaagccat tataggaaaa aatgtgtttt ctcattcctc tggtattcat 900 caagacggtg tattaaaaaa tagaaaaaac tatgaaatta ttgatccaaa ttctatcgga 960 tttactgatt attgttcttt gaacttgact tctcgctccg ggcgagcagc agtcaagcat 1020 catatgaaaa aaatgggata cgaaaatagc gattataatt taaacgaatt gtacatagat 1080 tttttaaaat tagccgataa aaaaggtcga atttttgatt atgatttaga agctttagca 1140 ttttttaaaa aacaacaaaa tacagaagaa tattataaat tggaatattt tgatgttcaa 1200 tcaaaattat caggattgtc tactgcatat attgttttaa tatgtggttc tcaaactaac 1260 attcaaaaag ctaccaccta taatggtcca gtggatgcaa tatatcaagc tttaaataaa 1320 gcaactctat attcaatagt tttaaaaaaa tttcatttgg aagcaaatgg agagggaaaa 1380 gatgctttgg gaaaagtaaa tattattgtt caatacaaat tacggaattt tcatggagtt 1440 ggtttagcta ctgatattat tgaagcatca gctcaagcta tggtaaatgt acttaattat 1500 atttggaaat ctcaacaggt taataaggaa ctggaaagat tgcagaaata aaaaaataat 1560 tgtgttcttt ttttttaaaa atattatttg gagacaattg tgtttaaaag aaaaaaatat 1620 gttgacaatc cttatcctaa atttgttcaa cctaaaaatc ataaaaaacg tccagctttt 1680 attcgatacg caatgcgatg tgctgctcaa actgatgtag ctagaaacga attgtattat 1740 actaatccat taaaaaatcc tataacagga tgtgttttgc atagaaaaag acgtttaaat 1800 gaacatagag cacgagcatt aagagctgtg gtgcaagcga tgctatatta ttttaatata 1860 gcatctatgt tagttatggc atctgttgaa aaattgtctg atgtatgtgg attatctact 1920 tattctagcg cagggaataa atctattaca cgcgcttctc gtcttattac tcaatttatg 1980 gaacctatgg gtcttataag ttgtgaaaaa atttgggaca aaattttagg aatgtatatt 2040 cctaaaatta tttatttgaa acctttgttt tttatgcttt ttgatatttc taaaataaga 2100 ctcaaacgtg ttcgaataaa gcaattagaa tggatcaatt cgcaattaaa gaaaaaaggg 2160 gaatatccga taacattatt agaaattgaa aaacaggcta aagaaaaaca catccattcc 2220 gctttattat ttagaaagtc taaatatatc attaaaaaac aaaaaaacaa agcaaaaaaa 2280 tttttggaat tagacgaaaa atatgcaaaa tcgtatatat taaataattt ggtgaaaaaa 2340 tattcgacca aagaattatg caaacttgga ttgactaaat tgaaaagaaa ggtaaattgc 2400 gaatatttta gattaaaaaa attagcacaa cttccagttg tgtgataatt tttttttgaa 2460 attttttttt tttttttttg gattattatg cgtttaatta cgtagggggt atttttttta 2520 aaaattttat tttacgaatc tattattttt tttcacttgc atctaatgtt tttttttatt 2580 tttttttttt tttttgagta ttctttttta aaaaaaacat tagatgcaag tgaaaaaaaa 2640 taatagatgc ttcttaaaga gatacatgca aaataacttt taaaaaaaaa aaaaaaaaaa 2700 ataaagatat atactataat atatagtata ttaatacagt aaaacagatc aataaaaata 2760 ggcgaaacag aaatgaagaa aaaaaaagag tatagaattg cggttcttcc tggagatgga 2820 attggtccag aagttatgca agaagcgtat aaaatattaa atgttattaa taaaaaattt 2880 gattttaata tttatacaaa cgaatacgat attggcggta tagccattga taaatatggt 2940 gcgccgttac caaaaaaaac attaaatgga tgtatagaat ctcatgctat tttatttgga 3000 tctattggag gaaaagaatg gacgcattta ccagcagacg aacaacccga aagaggcgga 3060 ttgttaccat taagaaaatt ttttaattta tttgttaatc ttagacctat aaaattgcat 3120 ttttctttaa aaaaattgtc tcctttaaaa aaagaaatta tacaagatgg atttgatatt 3180 ttatgtgttc gtgaattaat tggtggaata tattttggtt taccaaaagg aaaaaataca 3240 tttgataaaa aaaatatttc tgcttttgat accgaaattt attcgaccaa agaaattgaa 3300 aaaattgcag atattgcatt ccagttgtct ttaaaaagaa aaaaaaaagt tttttctatt 3360 gataaagcaa atgttttaga aagttcgatg ttatggagag aagttgtgat ccaagtttca 3420 aaaagatatc caaatgttga actaattcat ttgtatattg ataacgcagc tatgcaactt 3480 attaaaaatc caaatcaatt cgatgttatt ttgtgttcca atttgtttgg tgatattttg 3540 tctgatgaat gtgccgcttt aacaggatct ttaggtatgt tgccttcggc tagtttaaat 3600 gaaagttttt tcggattatt tgaacctgca ggtggttctg caccagattt gaaaggaaaa 3660 aatatagcga atcctattgc tcaaattctt tcattagcat tattatttaa atattcttta 3720 caattagaaa aaatatcaca cttaatagaa ttatcagttt taaaaacgtt agaaaaagga 3780 tatcgtacat tagatatttc taatggtaaa aaatatatca caactgatca aatgggcaat 3840 tacattgcaa aaactttatc tgagttaata aactaatgaa aactacttta tatcaaaaaa 3900 tatttgattc acatttaata tatgaagata aaaataccac accaattatt tatattgatt 3960 tacatttaat tcacgaagtc acatctccac aagcattcga tggattacga ttaaaaaaaa 4020 ggttagttcg taatccttta aaaacttttg ctaccatgga tcacaatgtt tcaacaattt 4080 ctagaaaaat tagtgattct aaaaaaatgg caaaaattca aatgcgaaca ttaataaaaa 4140 attgtaaaga tttcaatatt cctctttatg atttaaaaaa tattaatcaa ggaattgtac 4200 atgttatagg tccagaacag ggtatgactt taccaggtat gaccgttgtt tgtggtgact 4260 ctcacacttc tacacatgga gcttttggtg ctttagcatt tggtataggt acttctgagg 4320 tagaacatgt ttttgctaca caaaccatac tacagaatcg tatgaaaaat atgagaatat 4380 ctatttatgg aaatataaaa aaaaatattt tttctaaaga tattatttta aatattatca 4440 ataaaattgg tacttcaggt ggtactggtt atgtcgtaga attttctggc tcagtaataa 4500 aaaaaatgag tatggaaagt cgtatgacca tatgcaatat ggctattgaa atgggagcaa 4560 aatcaggaat tattgaaccc gatgcaataa cttataatta tttaaaaaat aaaaattttg 4620 ttccaaaaaa tcgttcttgg aaagaatata ttcgaaaatg gaataattta aagtctggac 4680 caaaatcttt ttttgagcaa gacttttcta ttaatattag tcatatttct ccacaaatta 4740 cctggggaac taatccttct caagtaattc caattaatgg aaaaatacca atattaaaag 4800 atatacaaga tgttaatgta agagaggata ccgaacgatc tttagaatac atgggtttaa 4860 aacctggtac aagtttgtta aatataccag ttgataaagt ttttataggt tcttgtacta 4920 attcaagaat tgaagattta agagttgtag cgtctgttgt acaaaacaag aaaatttctg 4980 ataatattga agcattaata gttcctggat cggggttagt aaaaaaacaa gctgaaaaag 5040 aaggtctcga taaaattttt aaaaatgctg gttttcaatg gagacatgcg ggttgttcta 5100 tgtgtttagg tatgaacgaa gatcaattaa aaccatacga aagatgcgct tcgactagta 5160 atagaaattt tgaaggaaga caggggccaa aaggaagaac tcatcttatg agtccttggt 5220 tagctgctca aaccgctcta tatggaaaat ttgtgcatat tgcataacaa ttttctattt 5280 taaaaaatta tttttaaaaa gataagtcaa tataataatg aaaaatttta tacaacatat 5340 tggtgtttta gttccactag atatatcaaa tattgataca gatattatta ttccgaaaca 5400 gtttttacaa aaaatcacac gtactggttt tggtaaacat ttatttttta attggagatt 5460 taaagattct gaaggaaaaa ttaaaaatga taaatttatt ttgaatcatg ataattatcg 5520 aaaagccagt attttattaa caagagaaaa ttttggttgt ggttcttctc gagaacacgc 5580 agtttgggct ttaatggatt atggatttaa agtcattata gctcagagtt tttctgatat 5640 atttgttaat aattgtttaa ataatagatt attattaatt tctctttcta aaaaacatat 5700 tgaaaaatta ttttttataa ctcaacacaa aaaaagaaaa atttgtttaa ttgatttatt 5760 gaaagaaaaa attattgtag ataaatataa tatttctttc aaaattgatt tcattcaaaa 5820 acaatcaatt atgtatggct ttgataacat tgactataca ttaaaacata aaaaaaaaat 5880 tgatttatac gaaaaaaaga aaaataaata tgttttcttt tgatttttat tgttgaaatt 5940 gtaattcaag tctctagtat tttagagcat aaaatactag agacatttta aaaaaaatta 6000 ataaaaatat atttttttta cacaaatatt atttttacaa taggtattta aaac 6054 //