ID AY301064; SV 1; circular; genomic DNA; STD; PRO; 5247 BP. XX AC AY301064; XX PR Project:PRJNA16723; XX DT 25-JUN-2003 (Rel. 76, Created) DT 27-OCT-2009 (Rel. 102, Last updated, Version 5) XX DE Aeromonas salmonicida subsp. salmonicida strain A449 plasmid pAsa2, DE complete sequence. XX KW . XX OS Aeromonas salmonicida subsp. salmonicida A449 OC Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; OC Aeromonadaceae; Aeromonas. OG Plasmid pAsa2 XX RN [1] RP 1-5247 RX DOI; 10.1016/S0147-619X(03)00058-1. RX PUBMED; 12932739. RA Boyd J., Williams J., Curtis B., Kozera C., Singh R., Reith M.; RT "Three small, cryptic plasmids from Aeromonas salmonicida subsp. RT salmonicida A449"; RL Plasmid 50(2):131-144(2003). XX RN [2] RP 1-5247 RA Boyd J.M., Williams J., Curtis B., Kozera C., Singh R., Reith M.; RT ; RL Submitted (19-MAY-2003) to the INSDC. RL Institute for Marine Biosciences National Research Council of Canada, 1411 RL Oxford St., Halifax, NS B3H 3Z1, Canada XX DR GR; AY301064_GR. XX FH Key Location/Qualifiers FH FT source 1..5247 FT /organism="Aeromonas salmonicida subsp. salmonicida A449" FT /plasmid="pAsa2" FT /sub_species="salmonicida" FT /strain="A449" FT /mol_type="genomic DNA" FT /db_xref="taxon:382245" FT CDS 476..1183 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="Orf2" FT /db_xref="InterPro:IPR014914" FT /db_xref="UniProtKB/TrEMBL:Q7X2E8" FT /protein_id="AAP69890.1" FT /translation="MEGSKEEVVAQLRDDLNSLHEKNKVPVLVREIIEQKRWQGSPQKT FT AVHYGCPTREEDMGRYNDASGRTGVCYTADFAVTACAESYGRLYHKSDTKFHIGSDDLD FT KAHICTVRTTRETNTIDMGKLQACLHLTSDKLTGDDKTITREIVNWAANLPCSPYDGVT FT YRSRHHGGNGTCTAFWNVGGRGDPLETVNMVAVSNYKDRNLECFPQGWEEDDIDGEEIL FT TETLHFEITPNNP" FT CDS complement(1218..1874) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="Orf3" FT /db_xref="GOA:Q79IR6" FT /db_xref="InterPro:IPR010093" FT /db_xref="UniProtKB/TrEMBL:Q79IR6" FT /protein_id="AAP69891.1" FT /translation="MNRWKDSVMKTQTVQHAAPMAKERATLSHILSKRVEGLIGSVLPE FT IEQGAPIHTALELTDNDLMKLIVASFISKNSRVSPREMNKIKRRIEGTFSFYDLLKSLG FT GTIRVNEVASLLNVTRQTVHNYIKRNELLAVKPGNEFLFPIFQFDNDGISSEFQKILKL FT LPDDISPVTKISFFTSTVVEKENKSIIDILKTNNITSNTLSIIRNRARVFGRQMG" FT misc_RNA 1998..2537 FT /product="RNAII" FT /note="replication primer; oriV region" FT misc_RNA complement(1998..2110) FT /product="RNAI" FT /note="antisense RNA; regulator of RNAII" FT rep_origin 2518 FT /note="DNA replication origin" FT oriT 2790..2808 FT /note="origin of transfer" FT CDS 2977..3282 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="Orf1" FT /db_xref="UniProtKB/TrEMBL:Q7X2E7" FT /protein_id="AAP69892.1" FT /translation="MKDERDDQTLDLLPSGKRRGLPPTGKALSAAAKQAAYRARQREKT FT VTVTLNRLDCGELEIFLRNLRDGRTSTLAPEVVARLHEAVRSAWRGQLHSGNGDQK" FT gene 3303..3620 FT /gene="mobC" FT CDS 3303..3620 FT /codon_start=1 FT /transl_table=11 FT /gene="mobC" FT /product="mobilization protein" FT /note="MobC" FT /db_xref="InterPro:IPR008687" FT /db_xref="UniProtKB/TrEMBL:Q7X2E6" FT /protein_id="AAP69893.1" FT /translation="MIKIRVTADELVRLKGLSGDERLAEWMRSKCLGNDKAAGRRRTPV FT PKADPALLRQIAGIGNNLNQVARRVNSGEWGAVERVQVIAVLMAMERALQAISVPSTEV FT T" FT gene 3787..5247 FT /gene="mobA" FT CDS 3787..5247 FT /codon_start=1 FT /transl_table=11 FT /gene="mobA" FT /product="mobilization relaxase" FT /note="MobA" FT /db_xref="InterPro:IPR005094" FT /db_xref="UniProtKB/TrEMBL:Q7X2E5" FT /protein_id="AAP69894.1" FT /translation="MIVKFHARGVGRGSGPVDYLLGPQRDREGATLDRGDPGLIEALID FT SSPYAKKYTSGVLSFQEADLPREDKDKLMDSFERALLPGLDRDQYACLWVEHRDKERLE FT LNFVIPNIELLSGKRLQPYFDRADRPRIDAWKVVVNAQLGLHDPDDPLNKRALMTPSNL FT PKAKQDAAQAITDGLLSLAAAGELADRGDVVATLKQHGFEVVRETRKSISIADPEGGRN FT IRLKGALYEQDFRAGQDLRKELEAAGERYRNEREERVRAARESYSRGVGLKRAEIERRY FT RRPEPEVGLAGVEGVGFSVDRGGISAGDQLGRGVVPGEGHRRELGGDLAPEQDIGAVDG FT EGRQIGTVNVRRGQAAVREGGLEGVGLWRQRERRISLDDPGGLLNDRARTAVIERVREF FT GRRVQSAALGLGERLQRFAADVRGHLYREPGIAGERGELEQAGVALERSSREIEPKIEA FT LSLDREPRCGGMSFGREYREYGDREYGD" FT gene 4475..4939 FT /gene="mobB" FT CDS 4475..4939 FT /codon_start=1 FT /transl_table=11 FT /gene="mobB" FT /product="mobilization protein" FT /note="MobB" FT /db_xref="InterPro:IPR006922" FT /db_xref="UniProtKB/TrEMBL:Q79IR5" FT /protein_id="AAP69895.1" FT /translation="MSKILELAKTFEKSSKQQASDIETSVKNAFEPHEKAILEALDSSG FT RRLNAAIDAQSRRWGWLVLKGWVFPLIGVAFLLGISWVVVWYQGRVIAENWVEISRQNK FT TLEQLTAKGGKLELSTCGEDKRLCVKVDLKELAYGDKEKDEYPWMIPEGY" FT gene 4940..5164 FT /gene="mobD" FT CDS 4940..5164 FT /codon_start=1 FT /transl_table=11 FT /gene="mobD" FT /product="mobilization protein" FT /note="MobD; putative" FT /db_xref="InterPro:IPR006983" FT /db_xref="UniProtKB/TrEMBL:Q79IR4" FT /protein_id="AAP69896.1" FT /translation="MTELERQLLNALESLEGGYRVQHSAWESAYSDLRLMFEATSTENR FT ALRESVGSLSKQVLHLSAQVERLSQKLKP" XX SQ Sequence 5247 BP; 1269 A; 1227 C; 1512 G; 1239 T; 0 other; gtggccctac tcaatcatta gccggtatag ctgttgcgac gtacattttc gttccgttgg 60 acttcatacc ccataacccg taggaataca cttcaaacgc gcttaggcgc gttttttgtt 120 ttcggtatgc cattgccttg ggggtaggga agaaatggct gtaatcgcca caagtaaagc 180 ctgtttttgg agctatttca tagctcgtag ctaaattgtg tttgtttgat taaaaaacta 240 gcaaaccacc ataaattcaa tctaggcgtt tttgtacgat tttggttttc ttatccttat 300 tttcaataag gaaagtttat aggcgttgat tgttgggata caatgtctct gccatgaaaa 360 atatggcaag gaggatgctg gctaaagcta atgcatcttt aaataaacat aagcatacaa 420 aggtgaagct tatgcaatta attataaacc cacactcacg atatcgaggt atcaaatgga 480 aggaagtaag gaagaagttg ttgcacaact acgtgatgat ttgaattctc tacatgagaa 540 aaataaagtt cccgtacttg ttcgtgaaat catagagcaa aagcgttggc agggaagtcc 600 gcaaaaaacg gcagtccatt atgggtgccc tacgcgtgag gaagatatgg ggcgttataa 660 tgatgcttct ggtcgaactg gcgtttgtta taccgcggat tttgcagtaa ctgcgtgcgc 720 tgagtcatat ggtcgccttt accataagtc agataccaag tttcacattg gtagtgatga 780 tctggataag gctcacattt gcacggtcag gactacgcgt gaaacgaaca ccattgatat 840 gggaaaactg caggcttgcc tgcatttgac tagtgataaa ttgactggtg atgacaaaac 900 catcaccagg gagattgtca actgggctgc gaatcttccc tgttcgcctt acgacggagt 960 tacataccgt tcaaggcatc atggtggtaa cgggacgtgc acagccttct ggaatgttgg 1020 tggaagggga gaccctttgg aaactgtcaa tatggttgct gtaagcaact ataaagatcg 1080 gaatctagag tgttttcctc aagggtggga agaggatgat atcgatggtg aggaaatctt 1140 aacagaaacc cttcacttcg aaatcacccc taacaaccca taataaagat ggtgtcgcca 1200 gttaatggcg acacttctta ccccatctgg cgcccaaaaa ctcgcgctct atttcttata 1260 atacttaaag tattgctagt tatattattt gtttttaaaa tgtcaattat tgatttgttt 1320 tctttttcta caacagtgga tgtgaaaaat gaaatcttag tcactgggct gatatcatca 1380 ggaagtaact taagtatttt ctggaactca cttgagatcc catcgttgtc aaattgaaat 1440 attgggaata aaaactcatt acctggttta acggctaaca gttcatttct ttttatatag 1500 ttgtgcacag tttgtctcgt aacatttaat agcgatgcta cttcattcac cctgattgtg 1560 ccacctaagg attttagcaa atcataaaaa gagaaagtcc cttctattct tcgctttatt 1620 ttgttcattt cccgagggct gactcgtgaa tttttagata tgaaacttgc tacgatcagt 1680 ttcatcagat cattatcggt taactctagg gccgtatgaa taggggctcc ctgttcaatt 1740 tcaggaagaa cagagcctat taggccttcg actcttttgc taagaatatg gcttagggtt 1800 gcacgctctt ttgccattgg ggcagcatgt tgcacagttt gagttttcat cacactatcc 1860 ttccacctat tcatttacgt ttatgttacg ccggtatgtg taaaacgtca atcttggtgc 1920 aaggatgcat tattgggttt ggttacggtt caaatgatct tgatcagatc gtctgatcaa 1980 gcgtaacctt ctaagcagaa aacaaaaaac ccgcctttag gcgggttctt tgcccggtgt 2040 tctaaggcgt aggaaccttg gaatccggtg ggtaacagct tcgagcagga agcggatacc 2100 gttaagtacc cccccagttt agccgcgtgc ggcccactgt tcaagtatca aacccctgct 2160 cgaaccctgt taccaaaggc tttcaccttt ggcgctttgt cgtattcgct cggattggac 2220 gcaagtgatt gttgccgtag cgggtgtgaa ggtcgggcag aacggggaaa tctcacatac 2280 tgcccaagcg tgcaatcgcg caccacagcc tcccagggct cgcaaccctg gggcatctgc 2340 aagtagagcg taacggggca ccaaccacgg ccagctctta aaaaacggcg cggcagcccg 2400 accaacaggc gggggctaaa gcagagtgca gcgggacggg gtgtgttctc tggagcgcgt 2460 gagagggagc tgccgcaagc agtctcgata gtccggagca aggcgagctt atcctgtaaa 2520 agaccctaaa tcgatgtggg tctgtaggag ggctctccta tcttgaagcg cagcgaaaga 2580 taggagagcc cggcaaactg cggcggcttg ccaacatcct tttcgtccgt ttttttgctt 2640 ccttagggca cgcatcatca cctcccttga tctctttttg cttcctacct gctacctatc 2700 ctcgaagccc tccaattaca gtcactgtta ctctaaatag tctcactaac aggtggttac 2760 aacctattcc gcctatgtca aacttgactc taagccagca tacacagagt gcccttagcc 2820 gcttcgcgtc ttcggttcct ctgtgaagct ggttcagggg cgtgccgccc ccggaccccc 2880 ctgcctccac cgccccgaaa aaccccgttc cgggctttcc caggtcggcg gacagaagag 2940 gtctatggtc acagttaccg taattgaggt gatcggatga aggacgaacg agacgaccag 3000 accctggact tgctgccaag tggcaagcgc cgaggtctgc cacctaccgg caaggcgttg 3060 agcgccgccg ccaagcaagc tgcttaccgg gcacggcaac gggaaaaaac ggtcaccgtt 3120 accttaaatc gtctggattg tggcgagctg gagattttcc tgcggaacct acgggatggc 3180 cgcacctcga ctctggcccc tgaggtggtg gccaggttgc atgaggctgt gcggtcggca 3240 tggcgggggc agcttcattc cggtaacggt gaccaaaaat gaccccgacc aaacgcgaac 3300 gggtgatcaa gatccgggtc accgctgacg aactggtccg cctaaagggc ttgagtggtg 3360 atgaacggtt ggccgaatgg atgcggagca agtgccttgg gaacgacaaa gcagccggtc 3420 ggcggcgaac gccggtaccc aaagccgatc cggctctgct gaggcagata gccgggatcg 3480 gcaacaacct caaccaggta gcgcggcgag tgaatagcgg ggagtggggc gcggttgagc 3540 gtgttcaggt gatcgcggtg ctgatggcga tggagcgtgc tttgcaggcc atctctgtac 3600 cctcaacgga ggtaacgtga tgaacgaata cagcgtagcc gagtatgact acaccctgat 3660 ccggttgccc tgcgaacagg gggggagctt gcggttgttg aaggatggcc aggaggtcag 3720 tggggaggtt taccaggagc acgatgaggc gctcagtgtg gccaccgtct ggctgtgcag 3780 cgagtcatga tcgtcaaatt tcatgcccgt ggcgtagggc gcggtagcgg cccggtcgat 3840 tacctgctgg ggccgcagcg ggatcgggag ggggcgaccc ttgaccgcgg cgatccgggt 3900 ctcatcgagg cgttgatcga cagtagcccc tacgccaaaa agtacacatc cggcgtgctg 3960 tcgttccagg aagcggactt gccccgggag gacaaggaca agctgatgga cagcttcgag 4020 cgtgcgttgt tgccagggtt ggatcgggat cagtacgcct gcctgtgggt ggagcaccgg 4080 gacaaagagc ggcttgagct caacttcgtg atcccgaata tcgagctgct gagtggcaag 4140 cggctgcaac cctatttcga ccgggccgat cggccccgca tcgatgcgtg gaaggtggtg 4200 gtcaacgccc agttgggatt gcatgacccg gatgatccct tgaacaaacg ggcattgatg 4260 acccccagca atctgccaaa ggccaagcag gacgcggcac aagcgatcac cgacggtctg 4320 ctttcgctgg cggcggccgg tgagcttgcc gaccggggag acgtggtggc cacgttgaag 4380 caacacggct ttgaggtggt gcgggagacc cgcaagagta tcagcattgc cgacccggaa 4440 ggggggcgga atatccggct aaaaggggcc ctgtatgagc aagattttag agctggccaa 4500 gaccttcgaa aagagctcga agcagcaggc gagcgatatc gaaacgagcg tgaagaacgc 4560 gttcgagccg cacgagaaag ctattctcga ggcgttggac tcaagcgggc ggagattgaa 4620 cgccgctatc gacgcccaga gccggaggtg gggctggctg gtgttgaagg ggtgggtttt 4680 tccgttgatc ggggtggcat ttctgctggg gatcagctgg gtcgtggtgt ggtaccaggg 4740 gagggtcatc gccgagaact gggtggagat ctcgcgccag aacaagacat tggagcagtt 4800 gacggcgaag ggcggcaaat tggaactgtc aacgtgcggc gaggacaagc ggctgtgcgt 4860 gaaggtggac ttgaaggagt tggcctatgg cgacaaagag aaagacgaat atccctggat 4920 gatcccggag ggctactaaa tgacagagct cgaacggcag ttattgaacg cgttagagag 4980 tttggaaggc gggtacagag tgcagcactc ggcctgggag agcgcctaca gcgatttgcg 5040 gctgatgttc gaggccacct ctaccgagaa ccgggcattg cgggagagcg tggggagctt 5100 gagcaagcag gtgttgcact tgagcgctca agtcgagaga ttgagccaaa aattgaagcc 5160 ctgagcctgg atcgggagcc gcggtgtggt ggaatgagct tcgggcggga gtatcgagag 5220 tatggtgatc gggagtacgg tgattga 5247 //