ID AY112723; SV 1; circular; genomic DNA; STD; PRO; 3684 BP. XX AC AY112723; XX DT 01-MAY-2003 (Rel. 75, Created) DT 16-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Bifidobacterium longum strain RW041 plasmid PNAC2, complete sequence. XX KW . XX OS Bifidobacterium longum OC Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; OC Bifidobacteriaceae; Bifidobacterium. OG Plasmid PNAC2 XX RN [1] RP 1-3684 RX DOI; 10.1016/j.plasmid.2003.12.003. RX PUBMED; 15003705. RA Corneau N., Emond E., LaPointe G.; RT "Molecular characterization of three plasmids from Bifidobacterium longum"; RL Plasmid 51(2):87-100(2004). XX RN [2] RP 1-3684 RA Corneau N., LaPointe G., Emond E.; RT ; RL Submitted (15-MAY-2002) to the INSDC. RL Bureau of Microbial Hazards, Food Directorate, Health Canada, Banting RL Research Centre, Tunney's Pasture, P.L. 2204A2, Ottawa, Ontario K1A 0L2, RL Canada XX FH Key Location/Qualifiers FH FT source 1..3684 FT /organism="Bifidobacterium longum" FT /plasmid="PNAC2" FT /strain="RW041" FT /mol_type="genomic DNA" FT /db_xref="taxon:216816" FT gene complement(join(2983..3684,1..192)) FT /gene="repB" FT CDS complement(join(2983..3684,1..192)) FT /codon_start=1 FT /transl_table=11 FT /gene="repB" FT /product="RepB" FT /note="similar to Rep protein of Bifidobacterium longum FT pKJ36 encoded by GenBank Accession Number AF139129" FT /db_xref="GOA:Q83YJ5" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q83YJ5" FT /protein_id="AAM66783.1" FT /translation="MSNEIVKFSNQFNNVALKKFDAVHLDVLMAIASRVREKGTATVEF FT SFEELRGLMRLRKNLTNRQLADKIVQTNARLLALNYMFEDSGKIIQFALFTKFVTDPQE FT ATLAVGVNEEFAFLLNDLTSQFTRFELAEFADLKSKYAKEFYRRAKQYRSSGIWKISRD FT EFCRLLSVPKSTAEQVRDLNKRVLKPIIEECGPLLGLKIERQYVKRRLSGFVFTFARET FT PPVIDARPVEARKAEDAGHWTSVAGYGEVFTTTELFDVTAARDHFDGTVEAGECRFCAF FT DARNREHHAQNAGKLF" FT CDS complement(490..1002) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="Orf3" FT /db_xref="UniProtKB/TrEMBL:Q83YJ3" FT /protein_id="AAM66785.1" FT /translation="MVKSLDEQIKSLQERQAQLKARENDLMARRRERERRARTKRLIEV FT GAMAESAAGFEGGDERAKERIARLVQLGSLVEAMCSTDVMDNYTSREDLKTTVTKALEH FT NVRTSDGMNWNLHDLVYEALSEEWGRRDGEISDLWADDGPSGYQPPSYEPVNPERRTPQ FT TPSDGLI" FT gene 1289..2986 FT /gene="mob" FT CDS 1289..2986 FT /codon_start=1 FT /transl_table=11 FT /gene="mob" FT /product="Mob" FT /note="similar to MobB protein of Bifidobacterium longum FT encoded by GenBank Accession Number AF139129" FT /db_xref="GOA:Q83YJ4" FT /db_xref="InterPro:IPR005053" FT /db_xref="UniProtKB/TrEMBL:Q83YJ4" FT /protein_id="AAM66784.1" FT /translation="MAIYHLSVSNVSRASGSKATATLSYISGRRVHDERRGETYDYGRK FT ERVLRVGTLLPEGAPAEFADPAVLFNAVELHETGRTARPAKKIVVALPREFTPRQRVQA FT LEEYIRENLNADGYAATYAIHEDREGNNPHAHILVANRQIDPATGGWARLKQRMEYVLD FT ERGERVPLIDPETGRQKTDKRGRRQWKRTSVSLNPLDRKAKLKALRESWANTCNARLDE FT TARIDHRSLEDQGSDLEPTIHEGYAARAIERAGGVSERCQTNREIRRSNSLLTAIRTEL FT GRIFDRLGELFAAKIRQLRQRQARPEPAREPNWRYFEGDARRQLEADKADHTAAIRGKL FT MDARADVGNREEWWRSHGTEEHEAAKQIIDVARAASREARDANIFKRGRLLRNAEQVAG FT EQSEKLRGAVPWLEDTDIPADWDQANRFRMRTTKAIYDHDMQPRTRLVAELERRLEQAE FT RAESERPSPEQVKALALRMAEQRAQAENPTQDTKRPAPSGDEPLDLSEPEDWGEASPFE FT SRQAPRTKADLLNEIRQRTDRLTGQREAEQRQIDPWSAQPPQRRGHGR" XX SQ Sequence 3684 BP; 697 A; 1226 C; 1157 G; 604 T; 0 other; ctgcctgttg gtcaggttct tcctcagccg catgaggccg cgcagctcct cgaacgagaa 60 ctccaccgtg gccgtgccct tctccctcac ccttgaggcg atcgccatga gcacgtccag 120 gtgcacggcg tcgaacttct tcagtgccac gttgttgaac tggttgctga acttcacgat 180 ctcattggac atggccttag catagctcct atgggggact caaattaagt tagtccacaa 240 ataatttgag tccccacctt gatcaaaaag gagacacatt ttagcaacgt ccccggttcg 300 ctcccttttt gtccccggtt cgctcccttt ttgtccccgg ttcgctccct ttttgtcccc 360 ggttcgctcc ctttttgtcc ccagtaacat cctctgagcc caatgtttcc aagggctgcg 420 gagggcctaa aagaatgtaa aaagatttta aaagatttaa aaagggcgca cggcgccttt 480 ttttggacgt cagatcaggc catcggaggg tgtttgggga gtcctgcgtt cggggttgac 540 cggctcgtat gagggtggct ggtatccgct tggcccgtcg tccgcccaga ggtcgctgat 600 ctcgccgtcc cttctgcccc attcctcgct cagcgcctcg tacaccaggt cgtgcaggtt 660 ccagttcatg ccatcgctgg ttctgacgtt gtgttccagg gccttggtga cggtggtctt 720 gaggtcctcg cggctcgtgt agttgtccat cacgtcggtg gagcacatgg cttccaccag 780 cgagccgagc tgcacgaggc gggctatgcg ctccttggcc ctctcgtcgc cgccctcgaa 840 gcccgcggcc gactcggcca tcgcgccgac ctcgatcagg cgcttggtgc gggccctgcg 900 ttcgcgttcc ctgcgccgcg ccatgaggtc gttctcgcgg gccttgagct gggcctgcct 960 ctcctgcagg gacttgatct gctcatccag gctcttcacc atcgaaacgg ctccttacat 1020 ggtctgcatc atccgtatgg tgatatgatt ctaccagcaa ggaaatccct aatcaaagat 1080 tagggcgcac ttacatgcaa ccggaggttg cattttccgt aagcgcgccc tccgggggcc 1140 acgggccttg ccctttggat tcccaccctt ccgggggagc ctcccggcag gcccagcggg 1200 tgctcgccgc acctctggga accccttgcc gcagggccgc cgccccgcac cccaccgccc 1260 gcgccgatca cgaaaggagc cgaagccgat ggcgatctac catctgtccg tctccaacgt 1320 gagccgcgcg agcggttcca aggccacggc cacgctctcg tacatcagcg gcaggcgggt 1380 gcatgacgag cgtcgcggcg agacctacga ctacgggcgc aaggagcgcg tgctgcgcgt 1440 cggcaccctg ctgccggagg gcgcgccggc cgagttcgcc gaccccgccg tgctgttcaa 1500 cgcggtcgag ctgcacgaga ccggacggac ggcgaggccg gccaagaaga tcgtggtggc 1560 cctgccgcgc gagttcaccc ccaggcagcg cgtgcaggcg ctggaggagt acatccgcga 1620 gaacctgaac gcggacggct acgcggccac ctacgccatc cacgaggaca gggagggcaa 1680 caatccgcac gcgcacatcc tcgtcgccaa ccggcagatc gacccggcca cgggcggctg 1740 ggcccggctc aagcagcgca tggagtacgt gctggacgag cggggcgagc gggttccgct 1800 gatcgacccc gagaccggca ggcagaagac cgacaagcgg ggccgcaggc agtggaagcg 1860 cacgagcgtg tccctgaacc cgctcgaccg gaaggccaag ctcaaggccc tgcgcgagtc 1920 ctgggcgaac acctgcaacg cgcggctgga cgagaccgcg agaatcgacc acaggagcct 1980 cgaagaccag ggcagcgacc tcgaacccac catccacgag ggatacgccg ccagggccat 2040 cgaacgggcc ggaggcgtca gcgagaggtg ccagaccaac cgtgagatca ggcgcagcaa 2100 cagcctgctg accgccatcc gcaccgaact cggccggata ttcgaccgcc tgggcgagct 2160 gttcgccgcc aagatcaggc agctgcgcca acgccaggcg aggccggaac cggccaggga 2220 gccgaactgg cgctacttcg agggcgacgc gcgccgccag ctcgaagccg acaaggccga 2280 ccacacggca gcgatccgcg gaaaactcat ggacgcgagg gccgacgtgg ggaaccggga 2340 ggagtggtgg aggagccacg gcaccgagga gcacgaggcc gccaagcaga tcatcgacgt 2400 ggcgcgagcc gcctcgcgcg aggccaggga cgcgaacatc ttcaagcgcg gcaggctgct 2460 gcggaacgcc gaacaggtgg ccggagagca gtccgagaag ctgcgcgggg cggtgccatg 2520 gctcgaagac accgacatcc cggccgactg ggaccaggcc aacaggttcc gcatgaggac 2580 caccaaggcc atctacgacc acgacatgca gccgaggacc aggctcgtgg ccgaactgga 2640 gaggcggctc gaacaggccg aacgggccga gagcgaacgg ccaagccccg aacaggtgaa 2700 ggccctcgca ctgcgcatgg ccgaacaacg cgcgcaggcg gagaacccga cgcaggacac 2760 gaaacggccc gcaccgtccg gcgacgagcc gctggacctc agcgagcccg aggactgggg 2820 agaggccagc ccgttcgaat cacgccaggc ccccaggacc aaggccgacc tgctcaacga 2880 gatcagacag cgcacggaca ggctcacagg ccagcgggag gccgaacagc ggcagatcga 2940 cccatggagc gcgcaaccgc cccagaggcg cggacacggc cgctagaaca gctttccggc 3000 gttctgcgca tgatgttcgc ggttgcgagc gtcaaacgcg cagaaacggc attccccggc 3060 ctccacggtg ccgtcgaagt ggtcacgcgc ggccgtcacg tcgaacagct cagtggtcgt 3120 gaacacctcg ccgtacccgg cgacgctcgt ccaatggccc gcatcctccg ccttcctcgc 3180 ctccacgggc ctggcgtcga tcaccggagg ggtctcgcgg gcgaacgtga acacgaaccc 3240 cgacagcctg cgtttcacgt actggcgctc gatcttcagt ccaaggagtg gcccacactc 3300 ctcgataatc ggcttgagga ctcgtttgtt gagatctctc acttgctcgg ctgtggattt 3360 gggaacgctg agcagtcggc agaactcgtc gcggctgatc ttccagattc cggagctgcg 3420 gtattgtttg gccctgcggt agaactcctt ggcgtacttg cttttgaggt cggcgaactc 3480 ggccagctcg aagcgcgtga actggctggt caggtcgttg agcaggaacg cgaactcctc 3540 gttgacccca accgcgagag tcgcctcctg cgggtcggta acgaacttcg tgaacagcgc 3600 gaactggatg atcttgcccg aatcctcgaa catgtagttc aacgccagca gccgcgcgtt 3660 cgtctgcacg atcttgtcgg ccag 3684 //