ID AY033435; SV 1; linear; genomic DNA; STD; VRL; 5076 BP. XX AC AY033435; XX DT 02-JAN-2002 (Rel. 70, Created) DT 08-JAN-2002 (Rel. 70, Last updated, Version 2) XX DE Bombyx mori densovirus 1, complete genome. XX KW . XX OS Bombyx mori densovirus 1 OC Viruses; ssDNA viruses; Parvoviridae; Densovirinae; Iteravirus. XX RN [1] RP 1-5076 RA Tijssen P., Li Y., Bando H., Dubuc R., Fediere G., Szelei J.; RT "Genome organization of densovirus from Bombyx mori (BmDNV-1) and enzyme RT activity of its capsid"; RL Unpublished. XX RN [2] RP 1-5076 RA Tijssen P., Li Y., Bando H., Dubuc R., Fediere G., Szelei J.; RT ; RL Submitted (24-APR-2001) to the INSDC. RL Centre de Recherche de Microbiologie et Biotechnologie, INRS-IAF, RL Universite du Quebec, 531 Boul. des Prairies, Laval, Quebec H7V 1B7, Canada XX FH Key Location/Qualifiers FH FT source 1..5076 FT /organism="Bombyx mori densovirus 1" FT /mol_type="genomic DNA" FT /db_xref="taxon:46253" FT repeat_region 1..230 FT /rpt_type=INVERTED FT /note="inverted terminal repeat" FT CDS 344..2608 FT /codon_start=1 FT /product="helicase NS1" FT /note="ATPase" FT /db_xref="GOA:Q8V0M7" FT /db_xref="InterPro:IPR001257" FT /db_xref="UniProtKB/TrEMBL:Q8V0M7" FT /protein_id="AAK55488.1" FT /translation="MSTQSGAYEDSWEDGLNPFDEDYVDLVRCMRNRGEHEEYTDLLDN FT VNTPRELLSAMESFEESSNEIPSQAATGVFAETGNRYDVHDPRLGYYDESCERRRRNDR FT ILNRGILSIYSKRLQKQLVGRIVRNSGRAEIGTFKPSYDEVLLNAHLTEQSKRNYGFER FT PFPVSYQQMELCHKDAFETPIERERSLDQFFRAVERRMGILADQLCRAFENNTVNARRI FT LHDSIEFRPGHRFREMVYKIRRALDSRGSYAIWFHETNKGTEDYPEDISRGYPPDYDFG FT VIPTRYRYCGKPAIEPIRIREGGGESQEPTIEFKTYKYYSEKKVYHNIEGRAYEEKKFE FT EPTQGHFHILHACRWYNNECRCLGRSFDVNPRKNKAIPIDPVDTEHIRNIVFYNTKWPR FT WPVHIKVADGPEFEYVYRTESVCKESIQPKRHSQQLEESNDQDESGPSGQQSSRLPTKR FT DNRCADVPHGRSSRNGNPVEKFVEQFKLRPTWPLEHILDTKDWLESEWGTYIASDKQIQ FT RTFQILMKITMNMTYSDLKMLYQNEHTMPIWGAISSNDLLNTYYTIEESQQIVEELLDF FT QMHNDQLEYFDSIEDAKKRFITDLYEILEKKHQKTNTFQIVSPPSAGKNFFIETVLAFY FT WNTGVIQNFNRYNNFPLMEAVNRRVNYWDEPNFEPDATETLKKLFAGTALKATVKFQKE FT ANVQKTPVIITANYDKFTKEVWDDRIIKYYWYPCPKLKEYNKRLHPFAWVYLVDKYVTD FT L" FT CDS 477..1832 FT /codon_start=1 FT /product="NS2" FT /function="unknown" FT /note="nonstructural protein-2" FT /db_xref="UniProtKB/TrEMBL:Q9JFY2" FT /protein_id="AAK55489.1" FT /translation="MLILLVNFCLLWSLLKSLQMKFQVKQRPEYLQKLETVMMSTIQDW FT DTMMKVVSAEEEMIEFLTEEFSAFIQKDCKNNSLEELYETVDEPKLVHSSLATMKYYLT FT LILQNKAKETTDLKGHSLSVINKWNSVIKTPLKLLSNEKEASTNSFERWNAEWESSQIS FT YAELLRIIQLMQEEFYTTPLSLDQATDFVKWFTKSGELLIAEVRTLFGSMKQIKERKTT FT QKTLVEDTHPTTISESYRLDTDTAESQQSSQSESEREEENRRNRPSSSRHINTTRKRKS FT ITTSKGVLTKKKSLKNQPRAISTYFTPADGTIMNAGASGGALTSIQGRIRQSLSTRSTR FT NIYATLCSITQNGPDGLCTSKWPTDPNSNMFIELNLFAKNQYNPSDTRNNWKRATIRMK FT VDLPDNSRHAYQLKEIIDAQMSRMEDHPETETQSKSSWSNSNSGQHGPWNTY" FT CDS 2712..4730 FT /codon_start=1 FT /product="capsid protein VP" FT /db_xref="GOA:Q8V0M6" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="PDB:3P0S" FT /db_xref="UniProtKB/TrEMBL:Q8V0M6" FT /protein_id="AAK55490.1" FT /translation="MPRIHFPYHNYLGPGTDNFEKNPIDEDDAIARSHDLAYDKVTNHK FT EVFQADKQARDEFFTSFVHTGNVHSLIGGIGLGTKNLVEEHVLGKPLYGMGKRKSTEKD FT WAKIKRINRARAARRENQENQPDIREFGHVAGQNINADQEVNLADFPDFLQDFVAEAGP FT SGTQPVETAQQSPPTMSEDIQPMETVGATDTGAGAQVDPRTGGQAAGGSGGMGAGGSAN FT DGRQDIFSGAPQPNQHHTLVYGKSYHFTITNGLPEFRHLATTNSGYYAQQRFKHIHGIP FT WERLLMYVSEGELLRMFRDYTSLKVEEVVCEVYSLGVRLPFVTSATTSSVANANAQYPI FT GCFHFDEAYETNYGINNVADIINKALGTEWKNATRPTAAVTTAWSEQFPNISASSTSRD FT INNPVIVDYSLPYFENNVPKDVGIYDYVDIKNGTTAYGKCWEKRFKPTNGLLYAESTLK FT GNVVTPLAAQPTNIMTPIPGLENGYFMSNDQIRERRDLTTSVPPVALTATKLNQSASNN FT LNAFVDYMGYNYFGEQKCAPQSMPKFMIGFVNIRNEDNSLLNAKWDILIKTRIRLTGLQ FT STREWVARTDRIPPQYFTSQYTQFRYPNINETPLLRSLGTFKLPTKRPGMDSRIAAGRA FT AETTQDEFIDAQKKLRHKSALLPIIEKPVTRSSKLNK" FT misc_feature 2712..2993 FT /note="Region: phospholipase A2 activity" FT repeat_region 4847..5076 FT /rpt_type=INVERTED FT /note="inverted terminal repeat" XX SQ Sequence 5076 BP; 1796 A; 978 C; 1015 G; 1287 T; 0 other; ttctctcaat atataccacc accacaaccc cccggaacac aggcccaaaa ttttcgctga 60 ccacgacgcg cgaagcgcgt cacttcgtgt ggtcacttcg tagcgaaaat tttgggcctg 120 tgttccgggg ggttgtggtg gtggtatata ttgagagaat tttttctagt ctttgtcggt 180 ttgaactggt atgaacctgt ctgtgacgtc atagttggtg tacgtgactt gccttgagta 240 cacaactgat aataaataag gtggtagtga taatataata atatagatat gataagaaga 300 taaagataga tataaataca gtataagaat agcacacatt aaaatgtcca cacagtctgg 360 cgcttacgag gactcctggg aagacgggct taatccattt gacgaagact acgtagatct 420 tgtaaggtgc atgcgcaata gaggtgaaca cgaagaatat acagacttgc ttgataatgt 480 taatactcct cgtgaacttt tgtctgctat ggagtctttt gaagagtctt caaatgaaat 540 tccaagtcaa gcagcgaccg gagtatttgc agaaactgga aaccgttatg atgtccacga 600 tccaagattg ggatactatg atgaaagttg tgagcgcaga agaagaaatg atagaattct 660 taaccgagga attctcagca tttattcaaa aagattgcaa aaacaactcg ttggaagaat 720 tgtacgaaac agtggacgag ccgaaattgg tacattcaag cctagctacg atgaagtatt 780 acttaacgct catcttacag aacaaagcaa aagaaactac ggatttgaaa ggccattccc 840 tgtcagttat caacaaatgg aactctgtca taaagacgcc tttgaaactc ctatcgaacg 900 agaaagaagc ctcgaccaat tctttcgagc ggtggaacgc agaatgggaa tcctcgcaga 960 tcagttatgc agagcttttg agaataatac agttaatgca agaagaattt tacacgactc 1020 cattgagttt agaccaggcc acagatttcg tgaaatggtt tacaaaatca ggagagctct 1080 tgatagcaga ggttcgtacg ctatttggtt ccatgaaaca aataaaggaa cggaagacta 1140 cccagaagac attagtagag gatacccacc cgactacgat ttcggagtca taccgactag 1200 ataccgatac tgcggaaagc cagcaatcga gccaatcaga atcagagagg gaggaggaga 1260 atcgcaggaa ccgaccatcg agttcaagac atataaatac tactcggaaa agaaagtcta 1320 tcacaacatc gaagggcgtg cttacgaaga aaaaaagttt gaagaaccaa cccagggcca 1380 tttccacata cttcacgcct gcagatggta caataatgaa tgcaggtgcc tcgggaggag 1440 ctttgacgtc aatccaagga agaataaggc aatccctatc gacccggtcg acacggaaca 1500 tatacgcaac attgtgttct ataacacaaa atggccccga tggcctgtgc acatcaaagt 1560 ggccgacgga cccgaattcg aatatgttta tagaactgaa tctgtttgca aagaatcaat 1620 acaacccaag cgacactcgc aacaactgga agagagcaac gatcaggatg aaagtggacc 1680 ttccggacaa cagtcgtcac gcctaccaac taaaagagat aatagatgcg cagatgtccc 1740 gcatggaaga tcatccagaa acggaaaccc agtcgaaaag ttcgtggagc aattcaaact 1800 caggccaaca tggcccttgg aacacatatt agacaccaag gattggcttg aaagtgaatg 1860 gggtacatat atagctagtg acaaacaaat acagcgaaca tttcaaatac ttatgaaaat 1920 aactatgaat atgacctaca gtgatttaaa aatgctctat cagaatgaac acactatgcc 1980 tatttgggga gcaataagta gtaatgactt attaaacacg tattatacca tagaagagtc 2040 acagcaaatt gtagaagaac tactcgactt ccaaatgcat aatgatcaac tagagtattt 2100 tgacagcata gaggatgcaa aaaaaaggtt tataacagac ctatatgaga ttttagagaa 2160 gaagcatcaa aaaacaaaca cattccaaat agtaagtcca cctagcgcag gaaaaaactt 2220 ttttatagaa acagtacttg cattttattg gaacactggg gtcattcaaa attttaaccg 2280 atacaacaat ttcccgttaa tggaagctgt taatagaaga gtaaactatt gggatgaacc 2340 aaactttgaa ccagatgcta cagaaacgct taaaaaatta ttcgctggaa cagccctgaa 2400 ggccacagtt aaatttcaga aggaagctaa tgttcaaaaa acccctgtta ttattacagc 2460 aaactacgac aaattcacta aagaagtatg ggacgatcgt atcattaaat attattggta 2520 tccttgtcct aaattaaaag aatataataa gcgattacat ccatttgcgt gggtttatct 2580 agttgataag tatgtaaccg atttgtaatc taatcaaaat gtataatcac aggtgatggt 2640 aataaatatg taatcttatc aaaatgtata aatataggtg atggtaataa atatatttag 2700 tgcaattcca tatgcctcgt attcattttc cttatcataa ttatcttggt ccgggtactg 2760 ataactttga aaaaaatcca atagacgaag acgacgctat cgcgaggtcg catgatttgg 2820 cttacgataa agtaaccaat cataaggaag tttttcaagc tgataaacag gcccgtgacg 2880 agttttttac ttcatttgtg catactggaa acgtgcatag tttaattggc ggtattggac 2940 ttggaactaa aaatttggta gaagaacatg tactaggtaa acccttgtac ggaatgggca 3000 aaagaaaatc aactgaaaaa gattgggcca aaatcaaaag gattaataga gctagagccg 3060 caagacgaga aaaccaagaa aaccaaccag atattagaga atttggacac gtagctggac 3120 aaaatattaa cgcagaccaa gaagtaaatt tggctgactt ccctgacttt ttacaagact 3180 ttgtagccga agcaggacca agtggaactc aaccagtcga aacagcacaa caatctcctc 3240 caacaatgtc tgaagatata caaccaatgg aaaccgtcgg ggccactgat accggagcag 3300 gagctcaagt cgatccacgt actggaggac aagcagctgg aggatccgga ggaatgggag 3360 ctggtggatc agctaatgat ggtagacaag acattttttc tggagcacca caaccaaatc 3420 aacatcatac attagtatat ggaaaaagct accatttcac aataacaaat ggtttacctg 3480 aatttcgaca tttagcaaca acgaactcgg gctattacgc tcaacaacgt tttaaacata 3540 tacatggaat tccatgggaa agactactaa tgtatgtaag tgaaggcgaa ctcctccgaa 3600 tgtttagaga ttatacttca ttgaaagtgg aagaagtagt atgtgaagtc tatagtctcg 3660 gagtacgatt accttttgta acttcagcca ctaccagttc agttgctaac gctaacgcac 3720 aatatcccat cggatgtttt cattttgatg aagcttatga aaccaactac ggcataaata 3780 atgtagcaga catcataaat aaagctcttg gaactgaatg gaaaaatgct acacggccta 3840 ctgctgctgt aacaacagct tggtccgaac aatttccgaa tatatcggca tcatctacga 3900 gtagggatat aaacaatccc gtaatcgttg attattctct tccatatttt gaaaataatg 3960 tgcctaaaga cgtcggaata tatgactacg ttgacattaa aaatggaact actgcttacg 4020 gtaaatgctg ggaaaaacga tttaaaccta cgaatggact tttatatgcg gagagtactt 4080 tgaaaggaaa cgtagtcact ccgcttgcag cgcaaccaac taatataatg acaccaatac 4140 ctggattaga aaatgggtat ttcatgagca atgaccaaat aagagaacga cgagacctaa 4200 ctacaagtgt accacctgta gctctaacag ctacaaaatt aaatcaaagt gcttctaata 4260 atttaaatgc atttgtggat tacatgggtt ataattattt cggcgaacaa aaatgcgctc 4320 cgcaatcaat gcctaagttt atgattggat ttgtaaacat tagaaatgaa gacaattctc 4380 tacttaatgc taaatgggac attttaatta aaactcgaat tagactcact ggacttcaat 4440 ctactaggga atgggttgct agaacggata gaattccgcc acaatatttc acatcacaat 4500 atacgcagtt ccgctatcct aatataaatg aaactcctct actaaggtct ttgggtacat 4560 ttaagttacc aactaaacga ccaggaatgg attcaagaat agccgctggg cgagctgcag 4620 aaacaacgca agatgaattt atagatgcac aaaagaaact tcgtcataaa tcggctttgt 4680 tacctataat tgagaaacct gtaactagat ctagtaaact aaataaataa atatacctat 4740 attaaatata cctttattgt tttaattagc aaaacctaat tataatatct atatcattat 4800 ctatcttaat atctaatcta taattaatac ttaacatacg tacattaagt cacgtacacc 4860 aactatgacg tcacagacag gttcatacca gttcaaaccg acaaagacta gaaaaaattc 4920 tctcaatata taccaccacc acaacccccc ggaacacagg cccaaaattt tcgctacgaa 4980 gtgaccacac gaagtgacgc gcttcgcgcg tcgtggtcag cgaaaatttt gggcctgtgt 5040 tccggggggt tgtggtggtg gtatatattg agagaa 5076 //