ID AP011542; SV 1; circular; genomic DNA; STD; PRO; 5838 BP. XX AC AP011542; XX PR Project:PRJDA38027; XX DT 25-MAR-2010 (Rel. 104, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 3) XX DE Bacillus subtilis subsp. natto BEST195 plasmid pBEST195S DNA, complete DE genome. XX KW . XX OS Bacillus subtilis subsp. natto BEST195 OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. OG Plasmid pBEST195S XX RN [1] RP 1-5838 RA Nishito Y., Osana Y., Popendorf K., Toyoda A., Fujiyama A., Itaya M., RA Sakakibara Y.; RT ; RL Submitted (29-JUL-2009) to the INSDC. RL Contact:Yasubumi Sakakibara Keio University, Biosciences and Informatics; RL Kouhoku-ku, Hiyoshi 3-14-1, Yokohama, Kanagawa 223-8522, Japan XX RN [2] RC Publication Status: Online-Only RX DOI; 10.1186/1471-2164-11-243. RX PUBMED; 20398357. RA Nishito Y., Osana Y., Hachiya T., Popendorf K., Toyoda A., Fujiyama A., RA Itaya M., Sakakibara Y.; RT "Whole genome assembly of a natto production strain Bacillus subtilis natto RT from very short read data"; RL BMC Genomics 11:243-243(2010). XX DR ENA; DRR000001. XX CC Gemome Coverage: 131x CC Sequencing Technology: Illumina Genome Analyzer II XX FH Key Location/Qualifiers FH FT source 1..5838 FT /organism="Bacillus subtilis subsp. natto BEST195" FT /plasmid="pBEST195S" FT /sub_species="natto" FT /strain="BEST195" FT /mol_type="genomic DNA" FT /db_xref="taxon:645657" FT CDS 166..1185 FT /codon_start=1 FT /transl_table=11 FT /gene="rep" FT /locus_tag="BSNT_90002" FT /product="replication protein" FT /note="from glimmer orf00002; involved in initiation of FT replication" FT /db_xref="GOA:D4G796" FT /db_xref="InterPro:IPR000989" FT /db_xref="UniProtKB/TrEMBL:D4G796" FT /protein_id="BAI87820.1" FT /translation="MYSSENDYIILEDKTATGKKRDWKGKKRRTNLMAEHYEALQSKTG FT IPYYGKKAEKLCSCAECLSFKRDPETGKLKLYQAQFCKVRLCPMCAWRRSLKIAYHNKL FT IVEEANRQYGCGWIFLTLTVRNVEGDGLKPMIADMMKGWNRLFGYKRVKVATLGYFRAL FT EITKNHEEDTYHPHFHVLLPVKKSYFTHNYIKQSEWTSLWKRAMKLDYTPIVDIRRVKG FT RAKIDAEQIESDVREAMMEQKAVLEISKYPVKDTDVVRGNKVTEDNLNTVFYLDDALSA FT RRLIGYGGILKEIHKELNLGDAEDGDLVKIEEEDDEVANEAFEVMAYWHPGIKNYIIR" FT CDS 1324..1842 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BSNT_90003" FT /product="hypothetical protein" FT /note="from glimmer orf00003" FT /db_xref="UniProtKB/TrEMBL:D4G797" FT /protein_id="BAI87821.1" FT /translation="MYICVVFSIILILFTSIEILLGGKVFMVTTIGKSKMWVGIIVVLS FT LLLVSFSPAVKADTKDKYYSTTSTQSSTKSYRKANTSGVYVKVLKAGRSRDVAISVFAD FT ANKGKGKPHWVNVSGSDGATLGKYVTAGHTYHLTNYAVERYGKNVPIQLFVSNGSGKKV FT EFYWSPDCR" FT CDS 1964..2524 FT /codon_start=1 FT /transl_table=11 FT /gene="sigP" FT /locus_tag="BSNT_90005" FT /product="type I signal peptidase" FT /note="from glimmer orf00005; involved in processing of FT pre-proteins" FT /db_xref="GOA:D4G798" FT /db_xref="InterPro:IPR000223" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019756" FT /db_xref="InterPro:IPR019757" FT /db_xref="InterPro:IPR019758" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:D4G798" FT /protein_id="BAI87822.1" FT /translation="MTKEKVFKKKSSILEWGKAIVIAVILALLIRNFLFEPYVVEGKSM FT DPTLVDSERLFVNKTVKYTGNFKRGDIIILNGKEKSTHYVKRLIGLPGDTVEMKNDHLF FT INGNEVKEPYLSYNKENAKKVGINLTGDFGPIKVPKDKYFVMGDNRQESMDSRNGLGLF FT TKDDIQGTEEFVFFPFSNMRKAK" FT CDS 2859..4307 FT /codon_start=1 FT /transl_table=11 FT /gene="mob" FT /locus_tag="BSNT_90006" FT /product="mobilization protein" FT /note="from glimmer orf00006" FT /db_xref="GOA:D4G799" FT /db_xref="InterPro:IPR001668" FT /db_xref="UniProtKB/TrEMBL:D4G799" FT /protein_id="BAI87823.1" FT /translation="MANYAVIRMEKYKKDRLNGTQKHNQREFQKSKNENIDRERTHLNY FT DLVNEKPISYSKAIHEKIEGRVKRKVRADAVLVSEFLITASPDYMNGLSDEEQRRYFET FT AVDHLKEKYSAENMLYATVHMDEATPHMHVGIVPITEDGRLSAKDFFNGKLKMKAIQDD FT FHRHMVENGFDLVRGEPSEKKHENVHQYKINQRQAELERLNAEIALKEKQREELEKQNK FT AVQAVIEVKKESLTAKAEELKMPTIEHEKAWLKKDKVIVPERELHALYAYAEQKTKTAA FT ELAGQLKSETQEKERWQSIARQEADRADEKDQRLQELQSRIHSEVEASKKEMRRKLAKE FT FTEEQRQDLRQEVKEELTTLRTENEELSAENKVLIIQRNSEAAESLKLKQELDKRNGQY FT AEVLSFAKKQNQTLEKVAGENKALKKENKTLKERVAVLEQWKDKMVQWAKEKLPKMRKL FT AASFFRTAGMPREANKYKDNELER" FT CDS complement(4318..4797) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BSNT_90007" FT /product="putative DNA-binding protein" FT /note="from glimmer orf00007" FT /db_xref="GOA:D4G7A0" FT /db_xref="InterPro:IPR009061" FT /db_xref="UniProtKB/TrEMBL:D4G7A0" FT /protein_id="BAI87824.1" FT /translation="MDMGIKLSSKDVAKHLGIEPVTVRKYASMLEEQGYSFNKDSKGWR FT LYTEDDVKTLEYLCTMTKINGHSLDETVKHIASLYRSKLTISDTATSLQDNPLVEFMKR FT QEEFNRHMAERMERFEKRQQERHETLTAALRESLETQKMIAATKQKKWWKFWKGN" FT CDS 4926..5087 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BSNT_90008" FT /product="hypothetical protein" FT /note="from glimmer orf00008" FT /db_xref="UniProtKB/TrEMBL:D4G7A1" FT /protein_id="BAI87825.1" FT /translation="MSDFETGMRYVRATLGFEGLVLTEEEEKLLERRFHGEITEEEYIQ FT KAFELSLM" XX SQ Sequence 5838 BP; 1814 A; 964 C; 1415 G; 1645 T; 0 other; ttgatactat atagaaacat ctcaaggcga aaaaatagcc cccatccctt atttgtcaag 60 ggtttgacgg ctttttgaca tgtagaaact ccttccgcta ttattaaagt gcccactaaa 120 ataatagaat gctagattac tagctcagaa ggagtttttt tgttcatgta ttcatctgaa 180 aatgattata tcatccttga ggacaagacc gcaacaggta aaaagcggga ttggaagggg 240 aaaaagagac ggacgaatct tatggctgag cactatgaag ctttacagag taaaactggt 300 ataccttact atggcaaaaa agctgagaaa ttgtgcagtt gtgcggaatg tctttcgttt 360 aaacgagacc cggagacggg caaattaaag ttgtatcaag ctcagttttg taaagtgagg 420 ttatgcccga tgtgtgcgtg gcgtaggtct ttaaaaattg cttatcataa taaattaatc 480 gttgaggaag cgaatcggca gtacggttgt ggatggattt ttctcacact gacggttcgg 540 aatgtcgagg gtgacggatt aaaacccatg attgctgaca tgatgaaagg atggaaccgc 600 cttttcggat ataaacgagt taaggtagcg actttaggtt atttcagagc tttagagatt 660 accaaaaatc acgaagaaga tacatatcat ccgcattttc atgtgttgtt gcctgtgaag 720 aaaagctatt ttactcacaa ttacattaag cagtctgagt ggacgagctt atggaaaagg 780 gcgatgaaac tggactacac gccgattgtt gatatccgaa gagtcaaggg aagagctaaa 840 attgatgccg aacagattga gagcgatgtg cgggaagcca tgatggagca aaaagctgtt 900 cttgaaatct ctaaatatcc ggttaaagat acggatgttg tgcgcggcaa taaggtgaca 960 gaagacaatc tgaacacggt gttttatttg gatgatgcgc tttctgcccg ccggcttatt 1020 ggttacggtg gcatcttgaa ggaaattcat aaagaactaa acctcggtga tgcggaggac 1080 ggcgatctcg tcaagattga ggaagaagat gacgaggtgg cgaacgaagc atttgaagtt 1140 atggcttact ggcatccagg cattaaaaat tacataatca gataaaaagc aggcgttgtt 1200 cctgcttttt ttatactcta atagtcaaat caagagttaa ttttagatgt aattgtgaga 1260 attagagtgg ctgaccagta tttgaaactt cttgggctac tttcttaact ttatattaaa 1320 actatgtata tatgtgttgt tttttctatt attttgatat tatttacaag tattgaaatt 1380 ttgctaggag ggaaagtttt tatggttacc acgattggta aaagtaagat gtgggtaggt 1440 attattgttg tattatcttt attattggta tctttttcgc ctgctgtaaa ggctgatact 1500 aaggataaat attattctac aacttctacc caatcttcaa caaaaagtta tcgtaaagct 1560 aatactagtg gggtctatgt gaaagtactt aaagctggac gttctcgtga tgttgctatt 1620 tcagtttttg ctgatgcgaa caaagggaaa ggaaagccac attgggtaaa tgtttctggt 1680 agcgatggcg ctactctggg aaaatacgtg actgcagggc atacatatca tcttacaaac 1740 tatgctgtag aacgttatgg aaagaatgtt cctatacaat tatttgtttc taatggttct 1800 ggcaaaaaag ttgaatttta ttggagtccc gattgtagat agtccaaata gcagatgatg 1860 aaaaagcagg attaatcctg ctagcaggat taatcctgct tttttatttt tgttttggta 1920 aaatgtgata agcgggtttt gaaatataga ggaggaaatt tctttgacaa aagagaaagt 1980 tttcaaaaag aaaagctcta ttttagagtg gggcaaggct attgtgatag ctgttatact 2040 tgctcttctt attcggaatt ttttgtttga gccatatgtg gtagaaggga agtctatgga 2100 tcccactttg gttgattctg aaagattatt tgtaaataag actgtgaagt atacaggtaa 2160 ttttaaacga ggggatataa taattttaaa cggaaaggaa aaaagcacac attatgtgaa 2220 gcgattaatt ggtttacctg gagacactgt agaaatgaag aatgaccacc tttttattaa 2280 tggaaatgaa gttaaggaac catatctttc ttataataaa gaaaatgcta agaaagtggg 2340 tataaacctt acaggagatt ttggaccaat taaagttcca aaagataaat attttgttat 2400 gggcgataac cgacaagaat caatggatag tcgtaatggg cttggactct ttactaaaga 2460 tgatattcag ggaaccgaag agttcgtatt ttttccattt agtaatatgc gaaaagctaa 2520 ataattttta gaccgaaaca ggctataagg tctgtttttt cattttgtta tgaacattta 2580 gcacacagat caaagttttc atagtttgaa tgctttgata gcagcaaagg gtatttctga 2640 ttttctgccg atctctcatc ggcggaaaag tcgggtcggc ggacagccga caagtggcac 2700 gaactttcga tgcgacagcg agaatgagag agccaccagc accgcaggtc gcacgtccaa 2760 atttgccatg ggcataattt ggtgtagtgc gttacaccaa agataaactt tgtgttacca 2820 taacccctat acagtggtct gaatcggggg tttttctcat ggcaaattat gcagtcatca 2880 ggatggaaaa atacaaaaaa gatagattga atggaacgca aaaacacaat cagcgggagt 2940 ttcaaaaaag caaaaatgaa aatattgatc gggagcggac gcacttaaat tatgatctag 3000 tgaacgagaa accgattagc tattcaaaag cgattcatga aaaaattgag gggcgagtca 3060 aacggaaggt ccgagcggat gctgttttgg tcagcgaatt tttgatcacg gcaagtcctg 3120 actatatgaa tgggctgagc gatgaggagc agcggcgcta ttttgaaaca gcggttgatc 3180 atttgaaaga gaaatacagc gctgaaaaca tgctttatgc tacagtccat atggatgaag 3240 cgactcctca tatgcatgtt ggtattgtac cgatcacaga ggacggccga ctctctgcga 3300 aagatttttt taatggcaaa ttgaagatga aagccattca agatgatttt catcggcaca 3360 tggttgaaaa cggttttgac ctggtgcgcg gcgaaccaag cgaaaagaag catgagaatg 3420 ttcaccagta taaaataaat cagcggcaag cggagcttga gcggcttaat gctgaaattg 3480 ctttaaagga aaagcagaga gaggaactgg aaaagcaaaa caaagctgtt caagcagtta 3540 tagaagtgaa aaaagaatcg ctgacagcta aggctgaaga gttgaaaatg ccgactattg 3600 aacatgaaaa agcgtggctc aaaaaggata aagtcattgt gccagagcgg gaactccatg 3660 ctttgtatgc ctatgcggag cagaaaacta aaacggcagc cgagttggcg gggcaattga 3720 agtcggaaac gcaggaaaag gagcgctggc agtctatcgc ccggcaggaa gcagatcggg 3780 cggatgaaaa agaccaacgg cttcaggaac tgcagagtag gatccattca gaagttgaag 3840 cgtccaaaaa ggaaatgcgg cgcaagcttg caaaggaatt tacggaagaa cagcgtcagg 3900 atcttcggca ggaagtgaaa gaggaactga cgactttacg aacggaaaac gaggaactgt 3960 cagctgaaaa taaagttttg atcattcaaa gaaatagcga agctgcggag agcctaaaac 4020 taaaacagga acttgataag agaaacgggc agtatgctga ggttttgagt ttcgccaaga 4080 agcagaatca aacgcttgaa aaagtggctg gagaaaacaa ggcgttaaaa aaagaaaata 4140 agacactaaa agagagagtt gccgtactgg aacaatggaa agacaaaatg gttcagtggg 4200 ctaaagaaaa attaccaaag atgcggaaat tagcggcatc gtttttccgt acggctggaa 4260 tgcctagaga agccaataaa tacaaggaca atgaattaga gcggtgaaaa cgggcaatca 4320 attgcccttc caaaatttcc accacttttt ttgtttggtg gctgcgatca ttttttgtgt 4380 ctcaagggac tcacgtaatg cagcggtgag tgtctcgtgc ctttcttgct gtcttttttc 4440 gaatcgttcc atccgttctg ccatgtggcg gttgaattct tcctgtcgtt tcatgaattc 4500 gactaaagga ttgtcctgta gcgatgtagc ggtatccgat atggtcagtt tagaacgata 4560 taagcttgct atgtgcttta ccgtttcgtc gagtgagtgt ccattgatct tagtcattgt 4620 acatagatac tctaaagtct ttacgtcatc ctcggtatag agtcgccatc ctttcgaatc 4680 tttattgaac gagtagcctt gttcttcaag catactggca tacttgcgga cagttactgg 4740 ctctataccg aggtgttttg cgacgtcctt tgatgataat ttgattccca tatccataac 4800 gtatcacctc gtaaaaaggg ttcgctatag tgagggcaaa gccctttatt tagagccatt 4860 taaaaagaaa gctgttccgt tcttttatca ggttgggact gtatttagtt tatgggggag 4920 tgccaatgag tgattttgaa acaggaatga gatatgtaag agcaaccctt ggctttgagg 4980 gtttagtgct gacggaagaa gaggaaaagc ttttagaaag acggtttcat ggagaaatca 5040 cagaggaaga atacatacaa aaagcgtttg agctttcttt gatgtgatgt acctgcaggg 5100 gcttataata ttcatagctg ttgttagaac ctaaaccctt ttaccgtttt tggcggtgag 5160 ggttcttttt ttttaggcag tgatgcgatt ttggcgtgag tcaacggtaa ccggaccgta 5220 gggaggatta aggagttgac tcgctcagcg ccacccgaac cctttcagca ctcaaacaaa 5280 cccgtttgtt tgacgccaac cggcgaggga gccccccgaa gaagcggggg gttgggggga 5340 ttgaatgctg gcatccaacg gccgtccgtt ggtgggtttg ggcaaagccc aagaactgtt 5400 gcaaggctcg ttgagaataa agaatgcttt tcaggatgct tagaatcgtt tctgagagct 5460 tcaaataaaa aagatgacct tttatagggg gaagctctta aaattgaatg taggggcatt 5520 taaacacgtt taaaaataaa aaaagcagac tctttagagt ccgccttgtt atttttaacc 5580 cagtgctcca ttttcggctg tttggaaatc ttttgagatg ccgaaccatc cattttcttt 5640 tgttccatga aaaaagtgct tttggatgct taaaaaggct ttttcgtata aaaaaagccg 5700 atttttgaaa aaaaaatctc cccccctgcg ggggaagaat ggttttgatc tttgggtttt 5760 aggttttaaa aaaagccggc tgttttcagc cggctttttt tcgattttgg cggagccgaa 5820 atcgggtctt ttcttatc 5838 //