ID AM498051; SV 2; linear; genomic RNA; STD; VRL; 3944 BP. XX AC AM498051; XX DT 15-JUL-2008 (Rel. 96, Created) DT 01-SEP-2008 (Rel. 97, Last updated, Version 4) XX DE Bluetongue virus 8 complete viral segment 1 XX KW complete genome; complete viral segment; RNA-dependent RNA polymerase; KW S1 gene; VP1 protein. XX OS Bluetongue virus 8 OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RC revised by [3] RA Maan S.; RT ; RL Submitted (02-MAR-2007) to the INSDC. RL Maan S., Department of Epidemiology, Institute for Animal Health, Pirbright RL Laboratory, Ash Road, Pirbright, Woking, Surrey GU24 0NF, United Kingdom. XX RN [2] RX DOI; 10.1016/j.virol.2008.04.028. RX PUBMED; 18570969. RA Maan S., Maan N.S., Ross-Smith N., Batten C.A., Shaw A.E., Anthony S.J., RA Samuel A.R., Darpel K.E., Veronesi E., Oura C.A.L., Singh K.P., Nomikou K., RA Potgieter A.C., Attoui H., van Rooij E., van Rijn P., De Clercq K., RA Vandenbussche F., Zientara S., Breard E., Beer M., Hoffman B., Mellor P.S., RA Mertens P.P.C.; RT "Sequence analysis of bluetongue virus serotype 8 from the Netherlands 2006 RT and comparison to other European strains"; RL Virology 377(2):308-318(2008). XX RN [3] RP 1-3944 RA Maan S.; RT ; RL Submitted (08-AUG-2008) to the INSDC. RL Maan S., Department of Epidemiology, Institute for Animal Health, Pirbright RL Laboratory, Ash Road, Pirbright, Woking, Surrey GU24 0NF, United Kingdom. XX CC Related entries AM498052-AM498060. XX FH Key Location/Qualifiers FH FT source 1..3944 FT /organism="Bluetongue virus 8" FT /segment="1" FT /host="Ovis aries" FT /strain="BTV-8NT (NET2006/04)" FT /mol_type="genomic RNA" FT /country="Netherlands" FT /collection_date="2006" FT /db_xref="taxon:197780" FT CDS 12..3920 FT /gene="S1" FT /product="RNA-dependent RNA polymerase" FT /note="VP1 protein" FT /db_xref="GOA:B4E548" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:B4E548" FT /protein_id="CAM57242.2" FT /translation="MVAITVQGAQLIKRVVERFYPGITFNINEGACYIYKFSDHIRRIR FT MKHGTKYRRQAEEIIRNISLRKERLYGIPVLDEVEWKYVFDGQTFQSYAFEVYVNSILP FT WSELDPEEEFLRNYRVSREMTEVEKFIEFRAKNEMQIYGDIPIKVWCCFINELSAELKH FT IPLGMQVMADFVNRFDSPFHQGNRDLSNLEDFQVAYTTPLLFEMCCMESILEFNIKMRM FT REEDISALEFGDMKVDPVGLLREFFILCLPHPKKINNVLRAPYSWFVKMWGVGADPIVV FT LQSTAGDDRNSKDVFYDKFRTEPNRYKALFRSSFYNESRRMNEEKILEAVKYSQKLGSH FT DRRLPLFEKMLKTVYTTPFYPHKSSNMILASFLLSIQTITGYGRAWVKNVSTEFDKQLK FT PNPSNLVQDVSDLTREFFKQAYVEAKERREEIVKPEDLYTSMLRLARNTSSGFSTEIYV FT KKRFGPRLRDKDLIKINSRIKALVIFTKGHTVFTDQELHKKYNSVELYQTKGSRDVPIK FT ATRTIYSINLSVLVPQLIVTLPLNEYFSRVGGITSPDYKKIGGKVIVGDLEATGSRVMD FT AADCFRNSADRDIFTIAIDYSEYDTHLTRHNFRTGMLQGIREAMAPYRDLRYEGYTLEQ FT IIDFGYGEGRVANTLWNGKRRLFKTTFDAYIRLDESERDKGSFKVPKGVLPVSSVDVAN FT RIAVDKGFDTLIAATDGSDLALIDTHLSGENSTLIANSMHNMAIGTLIQREVGREQPGI FT LTFLSEQYVGDDTLFYTKLHTTDTKVFDKVAASIFDTVAKCGHEASPSKTMMTPYSVEK FT TQTHAKQGCYVPQDRMMIISSERRKDIEDVQGYVRSQVQTMITKVSRGFCHDLAQLILM FT LKTTFIGAWKMKRTIKEDATYRDRKFDSNDEDGFTLIQIRNPLALYVPIGWNGYGAHPA FT ALNVVMTEEMYVDSIMISKLDEIMAPIRRIVHDIPPCWNETQGDKRGLISATKMSFFSK FT MARPAVQAALSDPQIMNLVEELPLGEFSPGRISRTMMHSALLKESSARTLLSSGYELEY FT QKTLNSWIAQVSMRLGEESGVISTSYAKLFDVYFEGELDGAPYMFPDQNLSPQFYIQKM FT MIGPRVSSRVRNSYVDRIDVILRKDVVMRGFITANTILNVIEKLGTNHSVGDLVTVFTL FT MNIETRVAEELAEYMTSEKIRFDALKLLKKGIAGDEFTMSLNVATQDFIDTYLAYPYQL FT TKTEVDAISLYCTQMVMLRAALGLPKKKMKIVVTDDAKKRYKIRLQRFRTHVPKIKVLK FT KLIDPNRMTVRNLENQFV" XX SQ Sequence 3944 BP; 1215 A; 689 C; 974 G; 1066 T; 0 other; gttaaaatgc aatggtcgca atcaccgtgc aaggtgcaca gctcatcaag cgagtggtcg 60 aacgctttta tccagggata acgtttaata taaatgaagg agcatgttac atatataagt 120 tttctgatca tatacgacgt ataaggatga aacatggaac aaaatatcga cggcaagcgg 180 aagagattat acgcaatatc agtttgagga aagagcgatt gtatgggata ccagtattag 240 atgaggttga atggaaatat gtgtttgatg gtcaaacgtt ccaaagttac gcttttgagg 300 tgtacgtgaa ctcaattttg ccgtggagtg aacttgatcc ggaggaagaa ttcttacgta 360 actatagagt ttcaagggag atgaccgaag tggaaaaatt tatcgagttc cgcgctaaaa 420 acgagatgca aatatacgga gatataccca ttaaagtatg gtgttgtttc atcaacgaac 480 tgagtgcaga attaaagcat attcccttag ggatgcaagt tatggctgat tttgtaaacc 540 gtttcgattc accattccac caggggaata gagatttatc aaatcttgaa gatttccaag 600 ttgcatacac tacgccgctt ctatttgaaa tgtgttgcat ggaatcaatc ttagaattca 660 atatcaaaat gcgtatgcgc gaagaagata tttcggcgct ggaatttggc gatatgaagg 720 ttgatccggt tggattattg cgtgagtttt tcattctgtg cttaccacac ccaaaaaaga 780 ttaacaacgt tctaagagcg ccatattctt ggtttgtgaa gatgtggggc gtcggagctg 840 atccgatcgt tgtcttacag tctacggcag gcgatgacag gaattcaaag gatgtgttct 900 atgacaagtt tcgaactgaa ccaaaccgat acaaagctct atttcggtca tcgttttata 960 acgaatcaag acgaatgaat gaggagaaga ttctagaggc ggtgaagtat tcacaaaagt 1020 tgggctcgca cgatcgtaga ttacctcttt ttgaaaaaat gttaaagacg gtttatacta 1080 caccatttta tccgcataag agctcgaaca tgatactggc gtctttttta ctaagtattc 1140 aaactattac cggatatggc agggcatggg tgaagaacgt gagcactgaa ttcgataaac 1200 agctgaagcc gaacccgagc aatctggttc aggatgtttc ggatctaacg cgggaattct 1260 ttaaacaagc atatgttgaa gcaaaagaac gtagagagga gatcgttaaa cctgaggatt 1320 tatacacgtc gatgctgcga ttagcgagaa atacaagttc aggtttttca accgagattt 1380 atgtaaaaaa gaggtttggt ccaaggttaa gggataaaga tttgatcaag atcaattcaa 1440 ggattaaggc tttggttatt ttcactaaag gacatactgt tttcactgac caagaacttc 1500 ataaaaaata taatagtgta gagttatacc aaactaaggg ttcaagagat gtaccgatta 1560 aggctacgag aacgatatat tcaatcaatc tttcagtatt ggtaccacag ttaattgtta 1620 ctttaccctt gaatgaatat ttttctaggg ttggcgggat aaccagtccg gattataaga 1680 agatcggagg gaaagtaatt gtcggagatt tggaggctac ggggtcgcgc gtgatggacg 1740 ctgctgattg ctttcgtaac tctgcagacc gtgatatatt cacaattgca attgactata 1800 gcgaatacga tacacaccta acgcgacata attttcgaac cggtatgctc caaggaatca 1860 gagaagccat ggccccctat agggatttgc gatatgaggg ttatacgttg gagcaaatca 1920 tagattttgg atatggagag gggagggtag cgaatacgtt atggaatgga aaacgaagac 1980 tgtttaaaac tacatttgat gcgtatatac gattagacga gagcgagcga gacaaaggta 2040 gtttcaaagt ccctaaagga gtgcttccag tatcgagtgt tgatgttgcg aatcgaatcg 2100 cggttgacaa agggttcgac acgcttattg cggcaacgga tggaagcgac ttggctttga 2160 tcgatacaca cctttccggc gagaactcga ctctcatcgc taactcgatg cacaacatgg 2220 ctattgggac cttgatacaa cgagaggttg gaagggagca gccagggatt ctcactttct 2280 tatcggaaca atatgtaggg gacgacacac tgttttacac aaaactacac actacagata 2340 ctaaggtttt tgataaagta gcggcttcga tctttgatac ggtggcgaag tgtggacatg 2400 aagcctcacc tagtaagaca atgatgacgc catattctgt agagaaaacc caaacgcatg 2460 caaagcaggg ttgttatgta ccgcaggatc gtatgatgat catctcatca gaaaggagga 2520 aggatatcga ggacgtgcag gggtacgtgc gttcgcaagt acaaacgatg ataacgaagg 2580 tgagtagagg attttgtcat gatttagcgc agttaatatt aatgcttaag actactttca 2640 ttggtgcgtg gaagatgaag cgaactatta aggaagatgc gacgtatcgc gatagaaagt 2700 ttgattcgaa cgatgaagac gggtttacgc tgatacagat tcgaaatcca ttagcattat 2760 atgttcctat aggctggaat gggtacggtg cgcatccggc agctctcaat gtcgtcatga 2820 cggaagagat gtatgttgat tcgatcatga tctcaaaact ggatgaaatc atggcgccga 2880 taaggaggat tgtgcatgac attccgccgt gttggaatga gactcaggga gacaagcgcg 2940 gattgattag tgcaactaaa atgagtttct tttcgaagat ggcaaggccc gctgttcaag 3000 ccgctttaag cgatccgcaa ataatgaatc tagtcgaaga gctcccactt ggagagtttt 3060 cacctggacg tatttcgaga accatgatgc atagtgctct tctgaaggaa tcaagtgcta 3120 ggacgttgtt atccagtggt tacgaactag aatatcagaa gactttaaat agttggattg 3180 cgcaagtttc gatgcgttta ggagaggagt caggagtgat atcgacatct tacgcgaaac 3240 tttttgacgt atactttgaa ggtgagttag acggcgcacc ctatatgttt ccagaccaga 3300 acttatctcc gcagttctat atacagaaga tgatgattgg cccacgggtt agctcgcgag 3360 tgcggaattc ttatgtagat cgaattgatg tgatattgag aaaggatgtc gttatgcgag 3420 gctttatcac tgctaatacc attctgaatg taattgagaa actgggaact aatcactcag 3480 tgggagattt agtcacagtt tttacgctta tgaacatcga gacacgtgtg gccgaagagc 3540 tagctgaata tatgacttca gaaaagatac gatttgacgc gttgaagctt ctaaagaaag 3600 ggatcgctgg cgacgaattc actatgtcgt tgaacgttgc tacacaggat tttatcgaca 3660 cttatctcgc ctatccatat cagttgacaa aaacggaagt cgatgccata tcgttgtatt 3720 gcacgcagat ggttatgcta cgcgcggcgc tcgggttacc aaagaagaag atgaagattg 3780 ttgtgactga tgatgcgaag aaaagataca agatacgttt gcagaggttt agaacgcacg 3840 tgcctaaaat taaagttctt aagaaattga ttgatccaaa tagaatgaca gttagaaatc 3900 ttgaaaacca gttcgtttga gagcacgcgc cgcattaccc ttac 3944 //