ID AM412317; SV 1; circular; genomic DNA; STD; PRO; 3886916 BP. XX AC AM412317; XX PR Project:PRJNA193; XX DT 23-MAY-2007 (Rel. 91, Created) DT 05-NOV-2010 (Rel. 106, Last updated, Version 4) XX DE Clostridium botulinum A str. ATCC 3502 complete genome XX KW complete genome. XX OS Clostridium botulinum A str. ATCC 3502 OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-3886916 RA Sebaihia M.; RT ; RL Submitted (21-NOV-2006) to the INSDC. RL Sebaihia M., Sulston Laboratories, Wellcome Trust Sanger Institute, RL Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM. XX RN [2] RX DOI; 10.1101/gr.6282807. RX PUBMED; 17519437. RA Sebaihia M., Peck M.W., Minton N.P., Thomson N.R., Holden M.T., RA Mitchell W.J., Carter A.T., Bentley S.D., Mason D.R., Crossman L., RA Paul C.J., Ivens A., Wells-Bennik M.H., Davis I.J., Cerdeno-Tarraga A.M., RA Churcher C., Quail M.A., Chillingworth T., Feltwell T., Fraser A., RA Goodhead I., Hance Z., Jagels K., Larke N., Maddison M., Moule S., RA Mungall K., Norbertczak H., Rabbinowitsch E., Sanders M., Simmonds M., RA White B., Whithead S., Parkhill J.; RT "Genome sequence of a proteolytic (Group I) Clostridium botulinum strain RT Hall A and comparative analysis of the clostridial genomes"; RL Genome Res. 17(7):1082-1092(2007). XX DR ENA; ERS000067. DR GR; AM412317_GR. DR RFAM; RF00001; 5S_rRNA. DR RFAM; RF00005; tRNA. DR RFAM; RF00010; RNaseP_bact_a. DR RFAM; RF00023; tmRNA. DR RFAM; RF00050; FMN. DR RFAM; RF00059; TPP. DR RFAM; RF00162; SAM. DR RFAM; RF00167; Purine. DR RFAM; RF00168; Lysine. DR RFAM; RF00169; Bacteria_small_SRP. DR RFAM; RF00174; Cobalamin. DR RFAM; RF00177; SSU_rRNA_bacteria. DR RFAM; RF00230; T-box. DR RFAM; RF00234; glmS. DR RFAM; RF00379; ydaO-yuaA. DR RFAM; RF00380; ykoK. DR RFAM; RF00504; Glycine. DR RFAM; RF00557; L10_leader. DR RFAM; RF00558; L20_leader. DR RFAM; RF01059; mir-598. DR RFAM; RF01071; OLE. DR RFAM; RF01118; PK-G12rRNA. DR RFAM; RF01316; CRISPR-DR3. DR RFAM; RF01731; TwoAYGGAY. DR RFAM; RF01749; pan. DR RFAM; RF01750; pfl. DR RFAM; RF01764; yjdF. DR RFAM; RF01831; THF. DR RFAM; RF01852; tRNA-Sec. DR RFAM; RF01854; Bacteria_large_SRP. DR RFAM; RF01990; SECIS_4. DR SILVA-LSU; AM412317. DR SILVA-SSU; AM412317. DR StrainInfo; 719454; 0. XX FH Key Location/Qualifiers FH FT source 1..3886916 FT /organism="Clostridium botulinum A str. ATCC 3502" FT /strain="ATCC 3502" FT /mol_type="genomic DNA" FT /db_xref="taxon:413999" FT CDS 1..1347 FT /transl_table=11 FT /gene="dnaA" FT /gene_synonym="dnaH" FT /locus_tag="CBO0001" FT /product="chromosomal replication initiator protein" FT /note="Similar to Bacillus subtilis chromosomal replication FT initiator protein DnaA or DnaH or bsu00010 SWALL:DNAA_BACSU FT (SWALL:P05648) (446 aa) fasta scores: E(): 3.4e-101, 62.52 FT 38d in 443 aa, and to Clostridium acetobutylicum DNA FT replication initiator protein, ATPase cac0001 SWALL:Q97N35 FT (EMBL:AE007513) (446 aa) fasta scores: E(): 3.4e-129, 79.01 FT 38d in 448 aa" FT /db_xref="GOA:A5HXP7" FT /db_xref="InterPro:IPR001957" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010921" FT /db_xref="InterPro:IPR013159" FT /db_xref="InterPro:IPR013317" FT /db_xref="InterPro:IPR018312" FT /db_xref="InterPro:IPR020591" FT /db_xref="UniProtKB/Swiss-Prot:A5HXP7" FT /protein_id="CAL81555.1" FT /translation="MNTHLTETWEKAINIIKGELTEVSFNTWIKSINPISLENNSLKLA FT VPNDFTKGILESRYKDLIVNALKLLTSKKYNIDFIVTTEEKIEENQKNHNNEKSNIVVN FT DEMSTMLNPKYTFDSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHA FT IGHYILHNNPKSQVVYVSSEKFTNELINSIKDDKNVEFRNKYRNIDILLVDDIQFIAGK FT ERTQEEFFHTFNALYEANKQIIISSDRPPKEIPTLEDRLRSRFEWGLIADIQAPDFETR FT MAILKKKADVENLNIPNEVMVYIATKIKSNIRELEGALIRIVAFSSLTNKEISIDLASE FT ALKDIISSKQTRQVTIDIIQEVVANYYNLKIEDLKSARRTRNIAFPRQIAMYLSRKLTD FT MSLPKIGEEFGGRDHTTVIHAYEKISNNLKKDESLQNAIKELNKRINQK" FT misc_feature 331..1272 FT /note="Pfam match to entry PF00308 bac_dnaA, Bacterial dnaA FT protein, score 706.0, E-value 1.9e-209" FT /inference="protein motif:Pfam:PF00308" FT misc_feature 451..474 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1213..1272 FT /note="PS01008 DnaA protein signature." FT /inference="protein motif:ProSite:PS01008" FT CDS 1610..2713 FT /transl_table=11 FT /gene="dnaN" FT /gene_synonym="dnaG" FT /locus_tag="CBO0002" FT /product="DNA polymerase III, beta chain" FT /EC_number="2.7.7.7" FT /note="Similar to Bacillus subtilis DNA polymerase III,beta FT chain DnaN or DnaG or bsu00020 SWALL:DP3B_BACSU FT (SWALL:P05649) (378 aa) fasta scores: E(): 1.1e-41, 39.78 FT id in 377 aa, and to Clostridium tetani DNA polymerase III, FT beta chain ctc00093 SWALL:Q899S6 (EMBL:AE015936) (367 aa) FT fasta scores: E(): 1.2e-94, 70.84 38d in 367 aa" FT /db_xref="GOA:A5HXP8" FT /db_xref="InterPro:IPR001001" FT /db_xref="InterPro:IPR022634" FT /db_xref="InterPro:IPR022635" FT /db_xref="InterPro:IPR022637" FT /db_xref="InterPro:IPR024693" FT /db_xref="UniProtKB/TrEMBL:A5HXP8" FT /protein_id="CAL81556.1" FT /translation="MKITCQKNILLEGISIVQKAVTGKSTLPILSGILIRANKNELVLT FT GSDMDLSIETKVKANILEEGTIVLDARLFGEIIRKLPNDLIEINTLEDNSIEIICQNSR FT FNLIYMNPGEFPNPPIINENMIFSIGESKLKNMIKGTIFATAQDETRPILTGVLFQIKD FT KMLNLVALDGYRLALRSEVVDNDNTINAVIPGKTLNEVSKILEEDNENVNITFTPNHIL FT FSIGETKIISRLLEGEFISYKSIIPEEFNLKIIAKRSELLNSIERASLMAKEGNTNLVK FT FDFSDDKIVITSNSQLGMVREELKVVLQGEDLQIAFNSKYLLDVLKTMEDNEVVLEFSS FT SVSPCIIKNTEINNCTYLVLPVRLNNN" FT misc_feature 1610..1966 FT /note="Pfam match to entry PF00712 DNA_pol3_beta, DNA FT polymerase III beta subunit, N-terminal domain, score FT 131.7, E-value 1.4e-36" FT /inference="protein motif:Pfam:PF00712" FT misc_feature 1991..2332 FT /note="Pfam match to entry PF02767 DNA_pol3_beta_2, DNA FT polymerase III beta subunit, central domain, score FT 119.4,E-value 7.1e-33" FT /inference="protein motif:Pfam:PF02767" FT misc_feature 2336..2698 FT /note="Pfam match to entry PF02768 DNA_pol3_beta_3, DNA FT polymerase III beta subunit, C-terminal domain, score FT 126.9, E-value 3.8e-35" FT /inference="protein motif:Pfam:PF02768" FT CDS 2732..2938 FT /transl_table=11 FT /locus_tag="CBO0003" FT /product="putative RNA-binding mediating protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe0003 SWALL:Q8XPG0 (EMBL:AP003185) (68 aa) fasta FT scores: E(): 5.1e-16, 66.17 38d in 68 aa, and to FT Clostridium acetobutylicum small conserved protein,ortholog FT of yaaa b.subtilis cac0003 SWALL:Q97N33 (EMBL:AE007513) (68 FT aa) fasta scores: E(): 1.2e-14, 64.7 id in 68 aa" FT /db_xref="GOA:A5HXP9" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR014330" FT /db_xref="UniProtKB/TrEMBL:A5HXP9" FT /protein_id="CAL81557.1" FT /translation="MVEIKINSEIIKLDSFLKWSGATTLGSEAKFFIQNGEVKVNGEIE FT KRRGRKLKIDDLIEFNNETYKII" FT misc_feature 2762..2905 FT /note="Pfam match to entry PF01479 S4, S4 domain, score FT 29.5, E-value 8.4e-06" FT /inference="protein motif:Pfam:PF01479" FT CDS 2998..4101 FT /transl_table=11 FT /gene="recF" FT /locus_tag="CBO0004" FT /product="DNA replication and repair protein" FT /note="Similar to Staphylococcus aureus DNA replication and FT repair protein RecF or sav0004 or sa0004 or mw0004 FT SWALL:RECF_STAAM (SWALL:P29232) (370 aa) fasta scores: E(): FT 1.8e-45, 39.62 38d in 371 aa, and to Clostridium FT perfringens DNA replication and repair protein RecF or FT cpe0004 SWALL:RECF_CLOPE (SWALL:Q8XPF9) (361 aa) fasta FT scores: E(): 2.5e-76, 59.5 38d in 363 aa" FT /db_xref="GOA:A5HXQ0" FT /db_xref="InterPro:IPR001238" FT /db_xref="InterPro:IPR003395" FT /db_xref="InterPro:IPR018078" FT /db_xref="UniProtKB/TrEMBL:A5HXQ0" FT /protein_id="CAL81558.1" FT /translation="MFRMYIKNVHLINFRNYDDMYLELSPNTNIFVGNNAQGKTNILES FT IYYSSIGKSHRTNKDKDLIKWDKNNTYLRTYVSRERLDKTIDINIFKNGKKAITVNKIK FT IKKISELMGNLNVVMFSPEDLRIIKDSPGNRRKFLDIELCKINNVYYHDLVQYNKILSE FT RNTALKNWNNKINDIIDIYDEQLSKYGAFIIKERNKYLDKLNIIGKNIHKKITNDLEDI FT NFRYLTNIKDFDNAEKELLIVLKKNRKKDLERNSTSIGPHRDDFEVSINNIDTRIFGSQ FT GQQRTAVLTLKFASLEIIKNIIGEYPVLLLDDVLSELDSNRQKFVLNSIDKIQTIITCT FT GIEEIDKYLDKKQSQLYLVNNGKIKRV" FT misc_feature 3007..3135 FT /note="Pfam match to entry PF02463 SMC_N, RecF/RecN/SMC N FT terminal domain, score 20.6, E-value 9.8e-06" FT /inference="protein motif:Pfam:PF02463" FT misc_feature 3094..3117 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 4122..4385 FT /transl_table=11 FT /locus_tag="CBO0005" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe0005 SWALL:Q8XPF8 (EMBL:AP003185) (86 aa) fasta FT scores: E(): 3.2e-26, 84.7 38d in 85 aa, and to Clostridium FT acetobutylicum orfx SWALL:P94603 (EMBL:U35453) (87 aa) FT fasta scores: E(): 2.5e-25, 82.55 38d in 86 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXQ1" FT /protein_id="CAL81559.1" FT /translation="MFLHLGENVVVPIKDVIGIFDMETSMYSSDTIQFLRLAEEDGFVE FT RITKEKPKSFVIAEVDKKSKIYLSPISSATLTKRTKVLYNEL" FT CDS 4403..6316 FT /transl_table=11 FT /gene="gyrB" FT /locus_tag="CBO0006" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /note="Similar to Clostridium acetobutylicum DNA gyrase FT subunit B GyrB or cac0006 SWALL:GYRB_CLOAB (SWALL:P94604) FT (637 aa) fasta scores: E(): 3.6e-193, 76.8 38d in 638 FT aa,and to Clostridium tetani DNA gyrase subunit B ctc00091 FT SWALL:Q899S8 (EMBL:AE015936) (637 aa) fasta scores: E(): FT 1.2e-190, 75.82 38d in 637 aa" FT /db_xref="GOA:A5HXQ2" FT /db_xref="InterPro:IPR001241" FT /db_xref="InterPro:IPR002288" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR011557" FT /db_xref="InterPro:IPR013506" FT /db_xref="InterPro:IPR013759" FT /db_xref="InterPro:IPR013760" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018522" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:A5HXQ2" FT /protein_id="CAL81560.1" FT /translation="MSQENKQVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYE FT IVDNSIDEALAGFCTHIEVFIHKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAG FT GKFGGGGYKVSGGLHGVGASVVNALSEQCEVEVRREGHIWKQKFERGITKTGLDIVGDT FT EDHGTKIYFKPDIEIFDELEFEYDTLAHRLRELAFLNKGIKISLTDERYDKKEMFHYEG FT GLRSFVLYLNRNKEKLHQQPIYVDENKDGCIVEIAMQYNDGYAENIFSFANNIDTIEGG FT THLAGFKSALTRVINDYARKFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKT FT KLGNGEVRGIVDTIVGQSIGSFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSI FT LESTSLPGKLSDCSSKDPSLCEIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQ FT RLDKILASDEIRAMITAFGAGIGKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYR FT YMKELIEEGHVYIAQPPLYRIYKAKKEIYVYSDPELDAALLELGGKDTNTNIQRYKGLG FT EMNPEQLWETTMDPEHRTLLQVTVEDAMEADEIFTILMGTKVEPRRDFIESNADKVVNL FT DI" FT misc_feature 4502..4933 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 115.1, FT E-value 1.4e-31" FT /inference="protein motif:Pfam:PF02518" FT misc_feature 5069..5581 FT /note="Pfam match to entry PF00204 DNA_gyraseB, DNA gyrase FT B, score 318.9, E-value 6.2e-93" FT /inference="protein motif:Pfam:PF00204" FT misc_feature 5660..5995 FT /note="Pfam match to entry PF01751 Toprim, Toprim FT domain,score 26.6, E-value 6e-05" FT /inference="protein motif:Pfam:PF01751" FT misc_feature 5672..5698 FT /note="PS00177 DNA topoisomerase II signature." FT /inference="protein motif:ProSite:PS00177" FT misc_feature 6074..6097 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT /inference="protein motif:ProSite:PS00687" FT misc_feature 6080..6280 FT /note="Pfam match to entry PF00986 DNA_gyraseB_C, DNA FT gyrase B subunit, carboxyl terminus, score 169.7, E-value FT 5.1e-48" FT /inference="protein motif:Pfam:PF00986" FT CDS 6342..8852 FT /transl_table=11 FT /gene="gyrA" FT /locus_tag="CBO0007" FT /product="DNA gyrase subunit A" FT /EC_number="5.99.1.3" FT /note="Similar to Clostridium acetobutylicum DNA gyrase FT subunit A GyrA or cac0007 SWALL:GYRA_CLOAB (SWALL:P94605) FT (830 aa) fasta scores: E(): 3.7e-211, 70.19 38d in 832 FT aa,and to Clostridium tetani DNA gyrase subunit A ctc00090 FT SWALL:Q899S9 (EMBL:AE015936) (813 aa) fasta scores: E(): FT 1.5e-215, 73.88 38d in 804 aa" FT /db_xref="GOA:A5HXQ3" FT /db_xref="InterPro:IPR002205" FT /db_xref="InterPro:IPR005743" FT /db_xref="InterPro:IPR006691" FT /db_xref="InterPro:IPR013757" FT /db_xref="InterPro:IPR013758" FT /db_xref="InterPro:IPR013760" FT /db_xref="UniProtKB/TrEMBL:A5HXQ3" FT /protein_id="CAL81561.1" FT /translation="MLNEGKILPVDVSKEMKKCYIDYAMSVIAGRALPDVRDGLKPVHR FT RIIYSMQGLGLAPEKGYRKCARIVGDVLGKYHPHGDTAVYEALVRMAQNFSIRYTLVDG FT HGNFGSVDGDGAAAMRYTEAKMSKISMELIKDINKNTVDFIPNFDGEEEEPSVLPSRFP FT NLLVNGSSGIAVGMATNIPPHNLTEVIDGIIMLIENEDVNILDLMTKIKGPDFPTSGLI FT VGTRGIREAYETGRGKVIIRAKAEIEEEKGKNKIIVTEIPYQVNKARLIENMANLVKDK FT KINGISDLRDESDRDGMRIVIELKRDANPNIVLNQLYKHTKLQDTFGIIMLALVNNQPQ FT ILNLKEILVNYVEFQKEVIRRRTRFDLDKALARAHILEGLRIALDHIDEVIKLIRASKN FT TAEAKEGLMNNFNLSEKQAQAILDMKLQRLTGLEREKIEEEYKELMEKISYFREILDKE FT ELVLSIIKEELIEIKNKYGDERKTEIVKGEHDIDIEDLIEDKKVIITLTHGGYIKRLDM FT DTYSSQKRGGKGIQATSTKQDDFIENMFVTSTHSTILFFTNRGKVYKLKAYEIPEAGRT FT AKGTNIVNIIPIENNEKIQTVIGLKDIDDMKHFVMCTRNGIIKKTEIKKYSSIRKGGLN FT AINLREDDELIDVKMTKGNNEIIIVTQNGYCIRFNEEDVRPMGRVATGVKGITLREDDK FT AVSMEVVLEDEALLSISENGFGKRTDIEEYPIHRRGGKGVITYKITDKTGPIVGARFIK FT EDDELMLVNSGDVAIRINVSEISKTSRNAMGVKLMRTSEEEKIVAIAKIKSEDIIEEEI FT LNEENLNEENLNEENLNEENLNEE" FT misc_feature 6432..7772 FT /note="Pfam match to entry PF00521 DNA_topoisoIV, DNA FT gyrase/topoisomerase IV, subunit A, score 1052.5, E-value FT 0" FT /inference="protein motif:Pfam:PF00521" FT misc_feature 7839..7988 FT /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA FT gyrase C-terminal domain, beta-propeller, score FT 51.3,E-value 2.2e-12" FT /inference="protein motif:Pfam:PF03989" FT misc_feature 7989..8147 FT /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA FT gyrase C-terminal domain, beta-propeller, score FT 55.1,E-value 1.6e-13" FT /inference="protein motif:Pfam:PF03989" FT misc_feature 8157..8300 FT /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA FT gyrase C-terminal domain, beta-propeller, score FT 43.8,E-value 4.1e-10" FT /inference="protein motif:Pfam:PF03989" FT misc_feature 8301..8450 FT /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA FT gyrase C-terminal domain, beta-propeller, score FT 67.8,E-value 2.3e-17" FT /inference="protein motif:Pfam:PF03989" FT misc_feature 8451..8603 FT /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA FT gyrase C-terminal domain, beta-propeller, score FT 52.1,E-value 1.3e-12" FT /inference="protein motif:Pfam:PF03989" FT misc_feature 8463..8489 FT /note="PS00572 Glycosyl hydrolases family 1 active site." FT /inference="protein motif:ProSite:PS00572" FT misc_feature 8604..8753 FT /note="Pfam match to entry PF03989 DNA_gyraseA_C, DNA FT gyrase C-terminal domain, beta-propeller, score FT 55.3,E-value 1.4e-13" FT /inference="protein motif:Pfam:PF03989" FT rRNA 9294..10735 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT rRNA 10989..13890 FT /gene="23S rRNA" FT /product="23S ribosomal RNA" FT rRNA 13982..14098 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT tRNA 14107..14183 FT /gene="tRNA Met (CAT)" FT /note="Cove score 95.73" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 14187..14262 FT /gene="tRNA Ala (TGC)" FT /note="Cove score 93.93" FT /inference="nucleotide motif:tRNAscanSE" FT CDS 14427..14879 FT /transl_table=11 FT /locus_tag="CBO0008" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00088 SWALL:Q899T0 (EMBL:AE015936) (167 aa) fasta FT scores: E(): 8.1e-17, 40.78 38d in 152 aa, and to FT Clostridium acetobutylicum predicted hd superfamily FT hydrolase cac0008 SWALL:Q97N30 (EMBL:AE007514) (158 aa) FT fasta scores: E(): 3.6e-16, 45.27 38d in 148 aa" FT /db_xref="GOA:A5HXQ4" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR006675" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5HXQ4" FT /protein_id="CAL81562.1" FT /translation="MEYEDIVYINMHLDNEELKIFNKLSISEQKHSIKVAYDIEKLYEK FT GKYNLTKDEFIKVALLHDIGKLNYKVDIIKKSIIVIMDRITNSRIKKFQNIKSIYVHYN FT HPYLGYCILKQYNKYSEKMLYLIKNHHNENIINKELSLLIYSDNLN" FT CDS 14895..15416 FT /transl_table=11 FT /locus_tag="CBO0009" FT /product="putative small molecule binding protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved protein, ortholog of yrxa FT b.subtilis cac0009 SWALL:Q97N29 (EMBL:AE007514) (171 aa) FT fasta scores: E(): 1.1e-34, 57.31 38d in 171 aa, and to FT Clostridium tetani transcriptional regulator ctc00087 FT SWALL:Q899T1 (EMBL:AE015936) (170 aa) fasta scores: E(): FT 1.4e-30, 53.25 38d in 169 aa" FT /db_xref="GOA:A5HXQ5" FT /db_xref="InterPro:IPR004173" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013196" FT /db_xref="UniProtKB/TrEMBL:A5HXQ5" FT /protein_id="CAL81563.1" FT /translation="MNSIERRKNIENMLMKNNKPIKGSEMGQKLGVTRQVIVKDIAILR FT ASGKNIIATPEGYLIPNENKQLIRKIIAVCHDSKDIKDELEVIIKFGGIVEDVVVEHPI FT YGEIKAMLMIKSMYDIDNFIKNIQNNKAEPLLILTGGIHLHTISSDNEDIMNKIIEELN FT QKNYLVDEEV" FT misc_feature 15108..15401 FT /note="Pfam match to entry PF02829 3H, 3H domain, score FT 82.3, E-value 1.1e-21" FT /inference="protein motif:Pfam:PF02829" FT CDS 15517..16581 FT /transl_table=11 FT /locus_tag="CBO0010" FT /product="conserved hypothetical protein" FT /note="Similar to Methanobacterium thermoautotrophicum FT hypothetical protein Mth772 SWALL:O26866 (EMBL:AE000856) FT (375 aa) fasta scores: E(): 2.1e-24, 31.88 38d in 345 FT aa,and to Methanosarcina mazei iron-sulfur cluster-binding FT protein mm0611 SWALL:Q8PZ83 (EMBL:AE013286) (376 aa) fasta FT scores: E(): 7.6e-22, 31.37 38d in 357 aa" FT /db_xref="GOA:A5HXQ6" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR007160" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5HXQ6" FT /protein_id="CAL81564.1" FT /translation="MNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYS FT NNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKA FT AYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNT FT LLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVAVKIIGYDNPLDIPVL FT KEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDP FT TLIKEKCIGCNRCAEVCPEKPYVIDMIKKGGKKIPVWNMKKCIRCFCCQELCPKGAIET FT KYSFIGRFLNRDGR" FT misc_feature 15517..16248 FT /note="Pfam match to entry PF04015 DUF362, Domain of FT unknown function (DUF362), score 107.5, E-value 2.6e-29" FT /inference="protein motif:Pfam:PF04015" FT misc_feature 16357..16428 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 27.0, E-value 1.4e-05" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 16378..16413 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 16462..16533 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 23.4, E-value 5.2e-05" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 16483..16518 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 16586..19267 FT /transl_table=11 FT /locus_tag="CBO0011" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved membrane FT protein ctc00086 SWALL:Q899T2 (EMBL:AE015936) (887 aa) FT fasta scores: E(): 2.6e-191, 56.71 38d in 894 aa, and to FT Clostridium acetobutylicum hypothetical protein Cac0010 FT SWALL:Y010_CLOAB (SWALL:Q97N28) (906 aa) fasta scores: E(): FT 6.1e-198, 56.57 38d in 905 aa" FT /db_xref="GOA:A5HXQ7" FT /db_xref="InterPro:IPR005372" FT /db_xref="UniProtKB/Swiss-Prot:A5HXQ7" FT /protein_id="CAL81565.1" FT /translation="MKNKKALFIPLFIIILFIAFFNKIINFIINIKWFKEVNYLAVYFT FT KMRAIIILMIPIFIIFFISIWMYYKSLIINKNKSVVDIGLNKNNYGKKLFFIFNFIVSI FT FLAYIFSSSYWYRILQFNNSVDFNVKDPIFFKDVSFYIFKLPLFESLYKVIISLLLFLV FT ITTFIAYFILEAKYKIQSKKDINLKNINHGIKSFAGKQLAIVSGLIILFISFGHLIKIW FT NLVYSSNGVSFGASYTDVHATLLFYKIIVVITLISSIVTLLSIVKGKFKPVSICIGITI FT FLIVSQNIASFLVQNFIVKSNEKTLEQPYIKNNIDLTRKAFALDDIEIRDFDIKNDLQK FT QDITDNKASIDNIRINSFKPTLEFYNQVQIIRYYYTFNDIDIDRYNINGKYNQVFLAAR FT EIDTDALNPNTWQNRHLIYTHGFGAVMNKVNSVTSEGQPDFVIKDIPPYNKTNIKLANP FT RIYFGEKTNDYVIVNTKINEFDYPKEDSNKTNKYNGHAGIKMSFINRLLFAINKKDINF FT LLSKDIKKDSKIIINRNIVERAKKIAPFLTYDSDPYMVIYNGKIYWIIDAYTTTNRYPY FT SEPYDSINYIRNSAKVVIDSVDGDINFYITDKKDPIVNNYAKIFKGLFKEEKDAPKEIR FT EHFRYPKDLFSIQSKVLGKYHVKDPGVFYNGEDLWEVSKDQKHVEGETNTNDAPYIIMK FT LPDQNKEEMVLLNYFNVMKKDNMIALFGARMDGEQYGKKILYKLPSDKTVYSPYLFKQK FT INQDTNISKELSLWNREGSKVQYGDTIILPIKNSLLYIEPLYLRASGKNSIPEMKRVIL FT SYNDKLVLSSSIQEGIKEIFNSKDNKINDKNEKDSTKTIDDSKLKKAQEYYNKAIEAQK FT NGDWTKYGENINELGNILNSIK" FT sig_peptide 16586..16649 FT /locus_tag="CBO0011" FT /note="probabilty 0.753, with cleavage site probability FT 0.462 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature 16586..18886 FT /note="Pfam match to entry PF03699 UPF0182,Uncharacterised FT protein family (UPF0182), score 1042.4,E-value 0" FT /inference="protein motif:Pfam:PF03699" FT misc_feature order(16604..16672,16730..16789,16865..16933,17036..17104, FT 17189..17257,17315..17383,17402..17470) FT /note="7 probable transmembrane helices predicted for FT CBO0011 by TMHMM2.0 at aa 7-29, 49-68, 94-116, FT 151-173,202-224, 244-266 and 273-295" FT /inference="protein motif:TMHMM:2.0" FT CDS 19404..20180 FT /transl_table=11 FT /locus_tag="CBO0012" FT /product="putative exported protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved of erfk family cac0011 FT SWALL:Q97N27 (EMBL:AE007514) (286 aa) fasta scores: E(): FT 2.6e-20, 34.52 38d in 281 aa" FT /db_xref="GOA:A5HXQ8" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:A5HXQ8" FT /protein_id="CAL81566.1" FT /translation="MKFKKSVYIVVLTLILLFIPCFIHTKKDVSTTNNLDNKTKEINKS FT EVDRNEMSVFSSNTCFKKTYYINKNKVPVYKNFDCNSEVLYYLYEDDIIVSYKEQNGYI FT FCEEGNLGRKGWIKKNKENLKGILHKNTEYKVDVDLIDQKIRVYKNDKIIKNIKCSTGV FT IGKQDTETPLGIFYITNKGKYFYSNKYNQGGRYYIKFFANYLIHSIPVDKNGNIIEEEK FT DKLGFPTSHGCIRVPMEDSKWLYRNIPNKSLIIIHY" FT sig_peptide 19404..19476 FT /locus_tag="CBO0012" FT /note="probabilty 0.970, with cleavage site probability FT 0.376 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 19791..20174 FT /note="Pfam match to entry PF03734 FT ErfK_YbiS_YhnG,ErfK/YbiS/YcfS/YnhG, score 56.8, E-value FT 4.8e-14" FT /inference="protein motif:Pfam:PF03734" FT CDS 20205..21602 FT /transl_table=11 FT /locus_tag="CBO0013" FT /product="putative dehydrogenase with iron-sulfur domain" FT /note="Similar to Clostridium acetobutylicum predicted FT dehydrogenase with iron-sulfur domain cac0012 SWALL:Q97N26 FT (EMBL:AE007514) (467 aa) fasta scores: E(): 1.2e-65,44.63 FT 38d in 475 aa, and to Clostridium tetani dehydrogenase, FT fad-dependent ctc00083 SWALL:Q899T4 (EMBL:AE015936) (475 FT aa) fasta scores: E(): 2.7e-91,55.48 38d in 465 aa" FT /db_xref="GOA:A5HXQ9" FT /db_xref="InterPro:IPR006076" FT /db_xref="InterPro:IPR007419" FT /db_xref="UniProtKB/TrEMBL:A5HXQ9" FT /protein_id="CAL81567.1" FT /translation="MDYDVMILGGGIIGCALAYELSKYSLNIALIEKDYDIADDVAFIN FT SSVVYDGVECEDDLAANLELNGNKLMEDIAKKFKIPFKKTGSLIIAQNDNEVYNIENMY FT KKALKRGIKNIEVLTKDEVEKIEPNLNIDFKKALYSSNTASIAPFDLAISYGEIAFDNG FT VNFKLEEQVLEIQKLSKGYKIITNKNKFNCNIVINTTPDENFGIYSDTKRNYKKSNLNY FT LLIEKNSIKEFNNIVVKLGTNENIKKILAVPTVQGSMVLAVDTYEKINYKNTLDVSALI FT LDEINEMDINNFYQFPYYDDSIVIDDSLIDKGYIKVIVNHYGQVTMTPYIAKIVTETIV FT SNIKCVLKKEFIDKRRDYYKFNELSLEERNKIINMDKRYGKIICACNKVTEGEIIDAIR FT RPLGARTLEGIKRRTGAAFGSCQGAYCLNKVVSILARETNKFMTDIVKDSKNSKIIPCR FT IKEFDTI" FT misc_feature 20217..20249 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 21345..21518 FT /note="Pfam match to entry PF04324 fer2_BFD, BFD-like FT [2Fe-2S] binding domain, score 82.8, E-value 7.1e-22" FT /inference="protein motif:Pfam:PF04324" FT CDS 21619..21972 FT /transl_table=11 FT /locus_tag="CBO0014" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00082 SWALL:Q899T5 (EMBL:AE015936) (133 aa) fasta FT scores: E(): 1.6e-25, 59.01 38d in 122 aa, and to FT Clostridium acetobutylicum uncharacterized small conserved FT protein, ortholog of t.maritima cac0013 SWALL:Q97N25 FT (EMBL:AE007514) (76 aa) fasta scores: E(): 3.4e-16, 76.38 FT id in 72 aa" FT /db_xref="InterPro:IPR012460" FT /db_xref="UniProtKB/TrEMBL:A5HXR0" FT /protein_id="CAL81568.1" FT /translation="MLREFICNGCNKKCIISLYNSNYNTIKGNQCNLGIDYAKNYVNNT FT KDIFTTLVRIKGSKYNVLPVKSSEPIEKSLWIECSKALSRLYVGYPIEIGDVICKNILN FT TGVDIIAIKNINE" FT misc_binding 22071..22279 FT /gene="serS" FT /locus_tag="CBO0016" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 22342..23622 FT /transl_table=11 FT /gene="serS" FT /locus_tag="CBO0016" FT /product="seryl-tRNA synthetase" FT /EC_number="6.1.1.11" FT /note="Similar to Clostridium tetani seryl-tRNA synthetase FT ctc00081 SWALL:Q899T6 (EMBL:AE015936) (426 aa) fasta FT scores: E(): 5e-131, 78.63 38d in 426 aa, and to FT Clostridium perfringens seryl-tRNA synthetase SerS or FT cpe0014 SWALL:SYS_CLOPE (SWALL:Q8XPE9) (425 aa) fasta FT scores: E(): 1.4e-125, 74.94 38d in 419 aa" FT /db_xref="GOA:A5HXR1" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002317" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR010978" FT /db_xref="InterPro:IPR015866" FT /db_xref="UniProtKB/Swiss-Prot:A5HXR1" FT /protein_id="CAL81569.1" FT /translation="MLDLKRIRNNSNEIKESLNNRGEKFDVTVIDEVLKLDEERRNILV FT KVEVLKSKRNQVSSEVPKLKKEGKDVSNIVAEMKNLSEEIKGFDTTLAKIDEKIQYIML FT RIPNIPNPQVPDGDTDEDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGS FT RFTFYKGLGARLERSLISYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFK FT ISEDDYFLIPTAEVPVTNLYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQH FT QFNKVELVKFTKPEQSYEELEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLE FT VWMPSYNRYVEISSCSNFEDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAIL FT ENYQNEDGSVTIPEVLRPYMGGKEAIK" FT misc_feature 22342..22491 FT /note="Pfam match to entry PF02403 Seryl_tRNA_N,Seryl-tRNA FT synthetase N-terminal domain, score 55.9,E-value 8.9e-14" FT /inference="protein motif:Pfam:PF02403" FT misc_feature 22831..23298 FT /note="Pfam match to entry PF00587 tRNA-synt_2b, tRNA FT synthetase class II core domain (G, H, P, S and T), score FT 209.9, E-value 4.1e-60" FT /inference="protein motif:Pfam:PF00587" FT misc_feature 23128..23202 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT /inference="protein motif:ProSite:PS00179" FT tRNA 23898..23988 FT /gene="tRNA Ser (TGA)" FT /note="Cove score 75.60" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 24009..24099 FT /gene="tRNA Ser (GCT)" FT /note="Cove score 71.86" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 24406..24496 FT /gene="tRNA Ser (TGA)" FT /note="Cove score 75.60" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 24517..24607 FT /gene="tRNA Ser (GCT)" FT /note="Cove score 71.86" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 24692..24768 FT /gene="tRNA Arg (ACG)" FT /note="Cove score 78.58" FT /inference="nucleotide motif:tRNAscanSE" FT CDS complement(join(24804..25562,25565..25690)) FT /pseudo FT /transl_table=11 FT /gene="psd1" FT /locus_tag="CBO0017" FT /product="phosphatidylserine decarboxylase (pseudogene)" FT /EC_number="4.1.1.65" FT /note="Similar to Escherichia coli, Escherichia coli FT O6,Escherichia coli O157:H7, and Shigella flexneri FT phosphatidylserine decarboxylase proenzyme Psd or b4160 or FT c5247 or z5766 or ecs5139 or sf4318 or s4582 FT SWALL:PSD_ECOLI (SWALL:P10740) (322 aa) fasta scores: E(): FT 1.3e-18, 31.42 38d in 280 aa, and to Clostridium FT pasteurianum phosphatidylserine decarboxylase proenzyme Psd FT SWALL:PSD_CLOPA (SWALL:Q46192) (296 aa) fasta scores: E(): FT 1.1e-66, 60.8 38d in 273 aa" FT /note="Also similar to CBO0025 (96.86 38d)" FT /note="This CDS contains a frameshift mutation following FT codon 42" FT /db_xref="PSEUDO:CAL81570.1" FT misc_feature complement(24813..25436) FT /note="Pfam match to entry PF02666 FT PS_Dcarbxylase,Phosphatidylserine decarboxylase, score FT 218.5, E-value 1e-62" FT /inference="protein motif:Pfam:PF02666" FT CDS complement(25888..25998) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0018" FT /product="putative transposase (partial)" FT /note="Similar to the C-terminal region of Clostridium FT acetobutylicum predicted transposase cac0656 SWALL:Q97LA6 FT (EMBL:AE007581) (189 aa) fasta scores: E(): 0.0018, 54.83 FT id in 31 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL81571.1" FT CDS complement(26183..26353) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0019" FT /product="putative transposase (partial)" FT /note="Similar to an internal region of Clostridium FT acetobutylicum predicted transposase cac0657 SWALL:Q97LA5 FT (EMBL:AE007581) (334 aa) fasta scores: E(): 1, 47.05 38d in FT 34 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL81572.1" FT CDS 26601..26963 FT /transl_table=11 FT /locus_tag="CBO0020" FT /product="putative exported protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HXR5" FT /protein_id="CAL81573.1" FT /translation="MSIKKLVLTGILTLSISAPVFAAWNYASITLPRTGAWATISRGAS FT GASQKTQVTRNAYTVNSRIINNGGTVLSGWQSHSSGTGTIRTHYSGAKKGDSVKAQFKT FT NATNVRTTTATIGWQP" FT sig_peptide 26601..26664 FT /locus_tag="CBO0020" FT /note="probabilty 1.000, with cleavage site probability FT 0.466 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature 26619..26687 FT /note="1 probable transmembrane helix predicted for CBO0020 FT by TMHMM2.0 at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 26691..26708 FT /note="PS00343 Gram-positive cocci surface proteins FT 'anchoring' hexapeptide." FT /inference="protein motif:ProSite:PS00343" FT CDS 27036..27884 FT /transl_table=11 FT /locus_tag="CBO0021" FT /product="putative ABC transporter, ATP-binding protein" FT /note="Similar to Bacillus halodurans ABC transporter FT bh0179 SWALL:Q9KGC5 (EMBL:AP001507) (220 aa) fasta scores: FT E(): 1.6e-29, 42.13 38d in 216 aa, and to Streptococcus FT pneumoniae ABC transporter, ATP-binding protein sp0707 FT SWALL:Q97RT3 (EMBL:AE007379) (215 aa) fasta scores: E(): FT 3.2e-28, 45.14 38d in 206 aa" FT /db_xref="GOA:A5HXR6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HXR6" FT /protein_id="CAL81574.1" FT /translation="MLENKTVLSVKNLSKSLGNKQVLKNVNLDLERGDIIGITGKNGSG FT KTTLLRIIIGLFYASSGDVIIEGKKLIPGFLGNLPTNVSALIENPNFLPQFTGFQNLKI FT LASIRNKISDEDIRNTMNLVGLSPSNKKNVSKYSLGMKQRLGIAQAIMENPDIILFDEP FT TNALDSDGVKIFTDIVSKMSKSGTSFIMVSHKKEDIDALCNKVYRIENGELNVIDNHKE FT WKIVVNDLVDLENLLKIYPNGNIIERVDNHPCIIYKNDWKDVSQVHEILNKNKINTISI FT E" FT misc_feature 27132..27671 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 152.8, E-value 6.3e-43" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 27153..27176 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 27444..27488 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 27893..28726 FT /transl_table=11 FT /locus_tag="CBO0022" FT /product="putative membrane protein" FT /note="Similar to Staphylococcus epidermidis membrane FT spanning protein se0213 SWALL:Q8CQC3 (EMBL:AE016744) (257 FT aa) fasta scores: E(): 0.022, 24.1 38d in 224 aa, and to FT Bacillus cereus bacitracin transport permease protein bcrb FT bc5399 SWALL:Q814M8 (EMBL:AE017015) (330 aa) fasta scores: FT E(): 0.17, 21.07 38d in 261 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXR7" FT /protein_id="CAL81575.1" FT /translation="MNYFFIKQYFSLRWKRWLTIIPIIFFSAVLLKYLAPIDFLPANKT FT LILKDYMFESLSYPFYILFVAPLLYCYLIYDIATKDYEGGYITFIISRIENRVSYFISK FT ILLIIITANIYFFMNLFVLIIVGLIFRLPLQGECYSPILKTSYKLGLNIYSIFLIQYGI FT YFIGLIAIGISVLVISLLFNNGIYSMIFIVMCFIQSREAFFNNHKNLKWSLIGQLALSK FT HYPFCFSDSQVDPSYLSYMIGYTAYYSIKFYIAISLIAFLVGMLCINKINFNKKM" FT misc_feature order(27950..28018,28061..28129,28190..28285,28343..28411, FT 28415..28483,28628..28696) FT /note="6 probable transmembrane helices predicted for FT CBO0022 by TMHMM2.0 at aa 20-42, 57-79, 100-131, FT 151-173,175-197 and 246-268" FT /inference="protein motif:TMHMM:2.0" FT CDS 28738..29541 FT /transl_table=11 FT /locus_tag="CBO0023" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani putative FT membrane-spanning permease ctp35 SWALL:Q899X9 FT (EMBL:AF528097) (269 aa) fasta scores: E(): 0.0012, 24.26 FT id in 272 aa, and to Bacillus subtilis hypothetical protein FT yybm yybm or bsu40590 SWALL:YYBM_BACSU (SWALL:P37491) (251 FT aa) fasta scores: E(): 0.0018, 23.95 id in 263 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXR8" FT /protein_id="CAL81576.1" FT /translation="MKNLILNQIYSTKKNVVTSILLILFFNICQLISILNDGKLDKLEV FT RPLDFFIKIYGGVHSKFFIFQYIQWIVVICTLLLIIENIINSYKGLDLMIINRSGFRLK FT WWSSKIISLFLLNIIYIIAIIVIYKILSIIFLCPSNYKIWSTYSKIYYIDLYNSTINPD FT KVLFMCLCIMLTGFIAISTFFQTINEITNNNIKIFIVFIIIMVINGILHMNNLIPRVLS FT PLNYPSILDITPNVGNYIKCIILNIVLIIFNTMVGSIFIIKKDIL" FT misc_feature order(28783..28842,28924..28992,29074..29142,29230..29289, FT 29326..29385,29464..29523) FT /note="6 probable transmembrane helices predicted for FT CBO0023 by TMHMM2.0 at aa 16-35, 63-85, 113-135, FT 165-184,197-216 and 243-262" FT /inference="protein motif:TMHMM:2.0" FT CDS 29558..30370 FT /transl_table=11 FT /locus_tag="CBO0024" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani putative FT membrane-spanning permease ctp34 SWALL:Q899Y0 FT (EMBL:AF528097) (271 aa) fasta scores: E(): 5.6e-08,25.67 FT 38d in 261 aa, and to Bacillus subtilis hypothetical FT protein yybm yybm or bsu40590 SWALL:YYBM_BACSU FT (SWALL:P37491) (251 aa) fasta scores: E(): 0.0006, 23.93 id FT in 259 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXR9" FT /protein_id="CAL81577.1" FT /translation="MVNSFFKIELKRAFFRWKTFIAFIIFMAVFIHISYLDKLDIPNTP FT TYLKYFFLENHNGFISYLKAMGFVNSYMAIVFPIIILLVVGDSLIEDVKTGFLQFYLTR FT TDWKNYIRSKTIAVSLVSFMVTFIFQVCAFIYSMITHPFYIPRNIDAAPSYARGLYMLN FT PYLYILLICIIFSLISIVIALFAIALSNRLKNSSQAILIPWILYLILGIGLNCIDSIYS FT FSPVFMCGPFIFERFYSGWEIILYWSVILFLSIYLGFKLFSKNFVFNK" FT misc_feature order(29594..29662,29759..29827,29909..29977,30050..30118, FT 30155..30223,30266..30334) FT /note="6 probable transmembrane helices predicted for FT CBO0024 by TMHMM2.0 at aa 13-35, 68-90, 118-140, FT 165-187,200-222 and 237-259" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(30610..31497) FT /transl_table=11 FT /gene="psd2" FT /locus_tag="CBO0025" FT /product="phosphatidylserine decarboxylase" FT /EC_number="4.1.1.65" FT /note="Similar to Escherichia coli, Escherichia coli FT O6,Escherichia coli O157:H7, and Shigella flexneri FT phosphatidylserine decarboxylase proenzyme Psd or b4160 or FT c5247 or z5766 or ecs5139 or sf4318 or s4582 FT SWALL:PSD_ECOLI (SWALL:P10740) (322 aa) fasta scores: E(): FT 3.2e-19, 31.9 38d in 279 aa, and to Clostridium FT pasteurianum phosphatidylserine decarboxylase proenzyme Psd FT SWALL:PSD_CLOPA (SWALL:Q46192) (296 aa) fasta scores: E(): FT 1.3e-81, 66.66 38d in 294 aa" FT /note="Also similar to CBO0017 (96.86 38d)" FT /db_xref="GOA:A5HXS0" FT /db_xref="InterPro:IPR003817" FT /db_xref="InterPro:IPR005221" FT /db_xref="UniProtKB/Swiss-Prot:A5HXS0" FT /protein_id="CAL81578.1" FT /translation="MIKYYNRKNKDYDIEKVAGEKYLNWTYSSPIGMNLLEVFIKKKFF FT SKIYGFYCDRRLSHKKINKFINDFKIDMSLSENQSSNFKCFNDFFTRKLKKEARPIKTD FT KNLLISPGDGKILAYENLNLNSVTEVKGINYSFYELINNDSLAKEYDNGTCLVLRLCPT FT DYHRFHFIDNGICENTIKLKGFYYSVNPIALSKIPSVFCKNKREYSIFHSENFGDIIFM FT EVGATCVGSIIQTYKPNTKILKGDEKGYFKFGGSTVILFFKKNTIKIDNDILNQSKLGY FT ETSVVMGESIGIKK" FT misc_feature complement(30619..31242) FT /note="Pfam match to entry PF02666 FT PS_Dcarbxylase,Phosphatidylserine decarboxylase, score FT 226.0, E-value 5.7e-65" FT /inference="protein motif:Pfam:PF02666" FT CDS complement(31600..33198) FT /transl_table=11 FT /locus_tag="CBO0026" FT /product="putative membrane protein" FT /note="Similar to Clostridium pasteurianum hypothetical FT protein in hydrogenase 1 5'region SWALL:YHG1_CLOPA FT (SWALL:Q46189) (530 aa) fasta scores: E(): 5.7e-112,59.81 FT 38d in 530 aa, and to Clostridium acetobutylicum ABC1 FT family protein kinase cac0033 SWALL:Q97N06 (EMBL:AE007516) FT (532 aa) fasta scores: E(): 1.5e-109,57.84 38d in 529 aa" FT /db_xref="GOA:A5HXS1" FT /db_xref="InterPro:IPR004147" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:A5HXS1" FT /protein_id="CAL81579.1" FT /translation="MYLNSVQRFKEIIKILAFYGFGHIVDSKFNEDKAPENLRKAFEEL FT GPTFIKIGQILSTRPDILSAPYIKELSKLQDSVPEDNFSDINKIFFEEFNISIEDAFLN FT FNRKPLASASISQVYSAKLHNNEEVIVKIQRPEIKEKMNMDLAILRKIFTLGKIKTFDT FT LIDPKEAIDELINATNLELDFNNEKENIKKFKYFNKNLKCIYVPNTIDKYCSSKIITME FT KIHGFKITDIKSLDKLNYDKKDVAHKLAISILKQIFEDGFFHGDPHPGNIFIYEGKICY FT IDFGIMGTLSSDLKNYLNKAMVAVAFKDVDKLISVLLSIGIKKGYINKNNLFEDINYLF FT DIYLSTPLKNIKMSTMLQEVFECANRNNISLPKELTMLIRSLIIIEGILEKIDPNIQIL FT DIAIPYVENNNKVNFFKNIDLDELILNSYKTAEDLSKIPTKTVQLLNSILNGRSKIQLN FT VNNLDRSINELNKMINRIVFALIISSMIIGFSFILNSNIGPKFYDISIIGILGYLIAAF FT MGFWLLISIIKSGKL" FT misc_feature complement(order(31618..31686,31705..31773)) FT /note="2 probable transmembrane helices predicted for FT CBO0026 by TMHMM2.0 at aa 476-498 and 505-527" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(32569..32925) FT /note="Pfam match to entry PF03109 ABC1, ABC1 family,score FT 108.2, E-value 1.7e-29" FT /inference="protein motif:Pfam:PF03109" FT CDS complement(33274..33594) FT /transl_table=11 FT /locus_tag="CBO0027" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein Cac0034 SWALL:Q97N05 (EMBL:AE007517) (101 aa) fasta FT scores: E(): 3.8e-11, 48.51 38d in 101 aa, and to FT Clostridium perfringens hypothetical protein Cpe2529 FT SWALL:Q8XHF6 (EMBL:AP003194) (112 aa) fasta scores: E(): FT 4.4e-08, 42.85 38d in 112 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXS2" FT /protein_id="CAL81580.1" FT /translation="MINEFKNILLAGIGSAAYTYEKASNLVDEMVQKGKITVNEGKELS FT QELKRTIDENKESKNSSEEKQLTREDIISIFNELNFVNKNDLNDINNKIKSLEDKISQL FT EK" FT tRNA 33779..33855 FT /gene="tRNA Arg (CCT)" FT /note="Cove score 76.78" FT /inference="nucleotide motif:tRNAscanSE" FT CDS 33989..35527 FT /transl_table=11 FT /locus_tag="CBO0028" FT /product="probable regulatory protein" FT /note="Similar to Clostridium beijerinckii FT signal-transduction and transcriptional-control protein Stc FT SWALL:STC_CLOBE (SWALL:P26047) (632 aa) fasta scores: E(): FT 6.9e-53, 40.21 38d in 460 aa, and to Clostridium tetani FT transcriptional regulator ctc02531 SWALL:Q890V4 FT (EMBL:AE015944) (519 aa) fasta scores: E(): 9.9e-83,50.58 FT 38d in 514 aa" FT /db_xref="GOA:A5HXS3" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:A5HXS3" FT /protein_id="CAL81581.1" FT /translation="MKLEIITEDRLGMVLDILNVLYNESMDIKSLEVFSKKIYIKINKK FT ISYNKNMIIKKIKNIKGVVRVKKIDILPYEKDEKKLFTIIDSLEEGVIFVNEKCQVEVF FT NKYCENLFNTLKENAIRKHIKEILGQNQLILDALKMGKDYDNLQVFINNKDRKGMYVST FT ARAIKDDKNKTIGFVILIKDLKETIEIVNSIKYKEDEAFKGIIGKSICIDNLKEICKSV FT AKTNSTVLICGESGTGKELFAKAIYKLSLRNNKNFVTVNCAGLQDNLIESELFGYEAGS FT FTGAKSNGKEGFFKLADKGTIFLDEIGELPLNIQCKFLRVLQEGTIRKIGSTKEEKIDV FT RIIAATNKNLEEMVLNGKFREDLYYRLNVVPIEIPPLRERKEDIQLLVDNFVKALNKSL FT NKNIRYIDKKFINKLLKYNFPGNIRELQNIIERTMNLCSDNILSDKNLSINTNITLNND FT SGALLLQDIVEKAEKCAIQKVMNEYKSLRKVGKVLGVSHTTVMNKIKKYGIVCK" FT misc_feature 33989..34204 FT /note="Pfam match to entry PF01842 ACT, ACT domain, score FT 20.7, E-value 0.0036" FT /inference="protein motif:Pfam:PF01842" FT misc_feature 34601..35269 FT /note="Pfam match to entry PF00158 Sigma54_activat,Sigma-54 FT interaction domain, score 409.7, E-value 2.9e-120" FT /inference="protein motif:Pfam:PF00158" FT misc_feature 34673..34714 FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT /inference="protein motif:ProSite:PS00675" FT misc_feature 34862..34909 FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT /inference="protein motif:ProSite:PS00676" FT misc_feature 35243..35272 FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature." FT /inference="protein motif:ProSite:PS00688" FT misc_feature 35438..35503 FT /note="Predicted helix-turn-helix motif with score FT 1652.000, SD 4.81 at aa 484-505, sequence FT KSLRKVGKVLGVSHTTVMNKIK" FT CDS 35687..36889 FT /transl_table=11 FT /gene="mdeA" FT /locus_tag="CBO0029" FT /product="methionine gamma-lyase" FT /EC_number="4.4.1.11" FT /note="Similar to Pseudomonas putida methionine gamma-lyase FT MdeA SWALL:MEGL_PSEPU (SWALL:P13254) (398 aa) fasta scores: FT E(): 3e-82, 53.03 38d in 396 aa, and to Clostridium tetani FT cys/met metabolism lyase ctc02530 SWALL:Q890V5 FT (EMBL:AE015944) (398 aa) fasta scores: E(): 3.2e-115, 73.61 FT 38d in 398 aa" FT /db_xref="GOA:A5HXS4" FT /db_xref="InterPro:IPR000277" FT /db_xref="InterPro:IPR006237" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5HXS4" FT /protein_id="CAL81582.1" FT /translation="MENIKKMGFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQG FT GRRFAGEESGYIYSRLGNPTSTEVENKLALLECGEAAVVAASGMGAIAASLWSALKSGD FT HVVASDTLYGCTFALLNHGLTRYGVEVTFVDVSNLDEVRNALKANTKVVYLETPANPTL FT KVTDIKQISNMVHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIA FT GFAVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQLRMEKHCKNAMEVAKFL FT ESHPAVKKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAV FT SLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIISDLKQALDLIV FT K" FT misc_feature 35714..36874 FT /note="Pfam match to entry PF01053 Cys_Met_Meta_PP,Cys/Met FT metabolism PLP-dependent enzyme, score 774.1,E-value FT 5.9e-230" FT /inference="protein motif:Pfam:PF01053" FT misc_feature 36296..36340 FT /note="PS00868 Cys/Met metabolism enzymes FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00868" FT CDS 37013..37450 FT /transl_table=11 FT /locus_tag="CBO0030" FT /product="putative cytosine deaminase" FT /note="Similar to Clostridium acetobutylicum cytosine FT deaminase cac0123 SWALL:Q97MR8 (EMBL:AE007525) (147 aa) FT fasta scores: E(): 1.8e-35, 63.88 38d in 144 aa, and to FT Clostridium tetani cytosine deaminase ctc00078 SWALL:Q899T9 FT (EMBL:AE015936) (146 aa) fasta scores: E(): 3.3e-35, 60.56 FT 38d in 142 aa" FT /db_xref="GOA:A5HXS5" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="UniProtKB/TrEMBL:A5HXS5" FT /protein_id="CAL81583.1" FT /translation="MNDYIEYAIIEAKKALAIGEVPVGAIIVKENKIIAKSHNLKESLK FT DPTAHAEILAIKEACNTIHNWRLKGCKMYVTLEPCAMCASAIIQSRISELHIGTFDPVG FT GACGSVVNITNNSYLKNNLNIKWLYDDECSRIITNFFKNIR" FT misc_feature 37013..37309 FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT 115.8, E-value 8.3e-32" FT /inference="protein motif:Pfam:PF00383" FT misc_feature 37160..37273 FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT /inference="protein motif:ProSite:PS00903" FT tRNA 37616..37705 FT /gene="tRNA Ser (GGA)" FT /note="Cove score 75.88" FT /inference="nucleotide motif:tRNAscanSE" FT misc_RNA 37829..37931 FT /note="SRP_bact RNA" FT CDS 38095..39720 FT /transl_table=11 FT /gene="dnaX" FT /gene_synonym="dnaH" FT /locus_tag="CBO0031" FT /product="DNA polymerase III subunit gamma/tau" FT /EC_number="2.7.7.7" FT /note="Similar to Bacillus subtilis DNA polymerase III FT subunit gamma/tau DnaX or DnaH or bsu00190 SWALL:DP3X_BACSU FT (SWALL:P09122) (563 aa) fasta scores: E(): 1.7e-51, 35.58 FT 38d in 548 aa, and to Clostridium tetani DNA polymerase III FT subunits gamma and tau ctc00075 SWALL:Q899U1 FT (EMBL:AE015936) (552 aa) fasta scores: E(): 5.2e-120, 64.42 FT 38d in 551 aa" FT /db_xref="GOA:A5HXS6" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR008921" FT /db_xref="InterPro:IPR012763" FT /db_xref="InterPro:IPR022754" FT /db_xref="UniProtKB/TrEMBL:A5HXS6" FT /protein_id="CAL81584.1" FT /translation="MGYTALYREWRPRTFKEVVGQKHITVTLKNQVIEKRIAHAYLFCG FT TRGTGKTSTAKILSKAVNCLNPKDGEPCNECEICNKINSGTLMDVIEMDAASKRKLEDI FT KEVIENVKYPPQEGKNKVYIMDEVHMLTQEAVNAFLKTLEEPPSNVIFILATTDPQKLP FT ITILSRCQRFDFRRIRNEEIFERLRAIVSEQGIYADDKSLNLIARMSDGAMRDALSILD FT QVISTGDGKVEYDQVLDMLGLVTNENLLRITNSIIEKDVEKSMRIIEDIVLSGKDIYNF FT IKDMITHLRNILMVKVSKNPNEILDMSSENIDLVKEQSEKIRIEEIMRNIKILQEAEQQ FT SKWVKQNRIYLELAVLKMCKIEYDTSKEVILSRLNKIEELIKSGNIKLAINEEKKKIEP FT KEFNLKREKESMQHSKIEKNSLEDYNKDSKLTVETVKKMWHDILEAFKARRLMVLYAAL FT VTANITDCKEGIITLNYNKQYSFNKKRLEKPENNKVVQEIFSEVLKEKIRIIYIVEEKA FT KEENLPEEILKNTFGENILEIIDE" FT misc_feature 38212..38784 FT /note="Pfam match to entry PF00004 AAA, ATPase family FT associated with various cellular activities (AAA), score FT 51.6, E-value 1.9e-12" FT /inference="protein motif:Pfam:PF00004" FT misc_feature 38227..38250 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 39785..40126 FT /transl_table=11 FT /locus_tag="CBO0032" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani transcriptional FT regulatory protein ctc00074 SWALL:Q899U2 (EMBL:AE015936) FT (113 aa) fasta scores: E(): 3.4e-29, 76.99 38d in 113 FT aa,and to Clostridium acetobutylicum hypothetical upf0133 FT protein Cac0126 SWALL:Y126_CLOAB (SWALL:Q97MR5) (112 aa) FT fasta scores: E(): 6.8e-27, 72.32 38d in 112 aa" FT /db_xref="InterPro:IPR004401" FT /db_xref="UniProtKB/Swiss-Prot:A5HXS7" FT /protein_id="CAL81585.1" FT /translation="MARGGFPNMGGANMNNLMKQAQKLQQDMEKMQGEMEKKEFSATVG FT GGAVTAVANGKKQIVDIKIEPEVVDEDDIEMLEDLIMSACNEALKKAEEDTSSEVKRLT FT GGMNLPGMF" FT misc_feature 39836..40114 FT /note="Pfam match to entry PF02575 DUF149, Uncharacterised FT BCR, YbaB family COG0718, score 150.9, E-value 2.3e-42" FT /inference="protein motif:Pfam:PF02575" FT CDS 40159..40755 FT /transl_table=11 FT /gene="recR" FT /gene_synonym="recM" FT /gene_synonym="recD" FT /locus_tag="CBO0033" FT /product="recombination protein" FT /note="Similar to Bacillus subtilis recombination protein FT RecR or RecM or RecD or bsu00210 SWALL:RECR_BACSU FT (SWALL:P24277) (198 aa) fasta scores: E(): 1.8e-46, 64.79 FT id in 196 aa, and to Clostridium tetani recombination FT protein RecR or ctc00073 SWALL:Q899U3 (EMBL:AE015936) (198 FT aa) fasta scores: E(): 3.8e-64, 86.86 38d in 198 aa" FT /db_xref="GOA:A5HXS8" FT /db_xref="InterPro:IPR000093" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR015967" FT /db_xref="InterPro:IPR023627" FT /db_xref="InterPro:IPR023628" FT /db_xref="UniProtKB/Swiss-Prot:A5HXS8" FT /protein_id="CAL81586.1" FT /translation="MDFYPIAIEKLIEEFAKLPGIGYKTAQRLTLYVLNLPKEEVKEFS FT EALVKARGTIKYCSVCGNFTDKDPCAICSNPNRNKSIICVIEQPKDIMSMEKIREYNGV FT YHVLHGNISPMAGRGPEDIKLKELIRRIDGSVNEVIVATNPNVEGEATAMYISKILKPL FT GVKVTRIAHGVPVGGDLEYADEVTLAKALEGRIEL" FT misc_feature 40273..40398 FT /note="Pfam match to entry PF02132 RecR, RecR protein,score FT 67.6, E-value 2.7e-17" FT /inference="protein motif:Pfam:PF02132" FT misc_feature 40330..40392 FT /note="PS01300 RecR protein signature." FT /inference="protein motif:ProSite:PS01300" FT misc_feature 40399..40677 FT /note="Pfam match to entry PF01751 Toprim, Toprim FT domain,score 72.8, E-value 7.3e-19" FT /inference="protein motif:Pfam:PF01751" FT CDS 40785..41075 FT /transl_table=11 FT /locus_tag="CBO0034" FT /product="conserved hypothetical protein" FT /note="Similar to Thermoanaerobacter tengcongensis FT hypothetical protein Tte0043 SWALL:Q8RDI2 (EMBL:AE012979) FT (90 aa) fasta scores: E(): 2e-05, 42.02 38d in 69 aa, and FT to Clostridium perfringens hypothetical protein Cpe0048 FT SWALL:Q8XPB7 (EMBL:AP003185) (92 aa) fasta scores: E(): FT 2.8e-05, 37.8 38d in 82 aa" FT /db_xref="InterPro:IPR019644" FT /db_xref="UniProtKB/TrEMBL:A5HXS9" FT /protein_id="CAL81587.1" FT /translation="MSIIEIGDKMGGFFIMKKLNDGKNEKKLLLESIDSVISEINNIRR FT LFENASDPKLIDYAIYMEEALKAKYIYLLKEAKEEGIKVEYCDTIKEVEVG" FT CDS 41225..41485 FT /transl_table=11 FT /gene="bofA" FT /locus_tag="CBO0035" FT /product="sigma-K factor processing regulatory protein" FT /note="Similar to Bacillus subtilis sigma-K factor FT processing regulatory protein BofA or bsu00230 FT SWALL:BOFA_BACSU (SWALL:P24282) (87 aa) fasta scores: E(): FT 0.0036, 32.92 38d in 82 aa, and to Clostridium FT acetobutylicum BofA b.subtilis ortholog, sigmak-factor FT processing regulatory protein cac0129 SWALL:Q97MR2 FT (EMBL:AE007525) (90 aa) fasta scores: E(): 2.3e-14, 54.76 FT id in 84 aa" FT /db_xref="InterPro:IPR010001" FT /db_xref="UniProtKB/TrEMBL:A5HXT0" FT /protein_id="CAL81588.1" FT /translation="MGIEYIAYFILAIFLLFVVVKIFSWPLKILLSLIGNAILGTVLLF FT ILNVIGGAFNFYIGINIWTALIAGFFGIPGVIFLIIFKLFL" FT misc_feature order(41237..41305,41315..41383,41402..41470) FT /note="3 probable transmembrane helices predicted for FT CBO0035 by TMHMM2.0 at aa 5-27, 31-53 and 60-82" FT /inference="protein motif:TMHMM:2.0" FT CDS 41636..42328 FT /transl_table=11 FT /gene="sfsA" FT /locus_tag="CBO0036" FT /product="sugar fermentation stimulation protein" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 sugar fermentation stimulation protein A SfsA or FT Sfs1 or b0146 or z0157 or ecs0150 SWALL:SFSA_ECOLI FT (SWALL:P18273) (234 aa) fasta scores: E(): 4.1e-18, 31.06 FT id in 235 aa, and to Clostridium tetani sugar fermentation FT stimulation protein ctc00070 SWALL:Q899U6 (EMBL:AE015936) FT (230 aa) fasta scores: E(): 1.2e-56, 70.3 38d in 229 aa" FT /db_xref="InterPro:IPR005224" FT /db_xref="UniProtKB/Swiss-Prot:A5HXT1" FT /protein_id="CAL81589.1" FT /translation="MKITKNILKAEFIKRPNRFQAYVKINEKIEMVHVPNTGRCKEILI FT PGSMVILREENNENRKTRYDLIAGYKGDMLINIDSQIPNKVVHEALMNLKIDILKEYTN FT IKREKTFGKSRFDFKLEKENGEIYYLEVKGVTLENDGLTMFPDAPTERGTKHILELIDV FT KNKGMGAGVLFLIQLNGVKKFTPHHKMDKNFGEALRLAKEKGVDILAYDCLVEESSISL FT NNPISIEI" FT misc_feature 41672..42316 FT /note="Pfam match to entry PF03749 SfsA, Sugar fermentation FT stimulation protein, score 255.5, E-value 7.6e-74" FT /inference="protein motif:Pfam:PF03749" FT CDS 42384..42872 FT /transl_table=11 FT /locus_tag="CBO0037" FT /product="putative NUDIX-family hydrolase" FT /note="Similar to Clostridium tetani predicted NADH FT pyrophosphatase ctc00069 SWALL:Q899U7 (EMBL:AE015936) (175 FT aa) fasta scores: E(): 5.5e-45, 70 38d in 160 aa, and to FT Clostridium acetobutylicum N-terminal Zn-ribbon domain and FT C-terminal MutT domain, yjad ortholog cac0145 SWALL:Q97MP7 FT (EMBL:AE007526) (174 aa) fasta scores: E(): 4.7e-34,54.37 FT 38d in 160 aa" FT /db_xref="GOA:A5HXT2" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/TrEMBL:A5HXT2" FT /protein_id="CAL81590.1" FT /translation="MKFKYCPLCGEKLIEKYSWDEGGVPYCKRHNIMYFDTPKPCIVVG FT VLKEDHVLLLKQSYIFKNSKVLLSGYVSSGETVEETVYREVKEEAGINIKDLRYLGSDY FT LESKDIVMLTFMATYKDGILNKSEEVEWIDWIPIEEAIDHMEEDEIGKKIIKKIMKNC" FT misc_feature 42495..42866 FT /note="Pfam match to entry PF00293 NUDIX, NUDIX FT domain,score 50.3, E-value 4.4e-12" FT /inference="protein motif:Pfam:PF00293" FT misc_feature 42591..42650 FT /note="PS00893 mutT domain signature." FT /inference="protein motif:ProSite:PS00893" FT CDS 42990..43712 FT /transl_table=11 FT /locus_tag="CBO0038" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum predicted FT enzyme with TIM-barrel fold cac0148 SWALL:Q97MP4 FT (EMBL:AE007526) (228 aa) fasta scores: E(): 1.9e-61,73.79 FT 38d in 229 aa, and to Thermoanaerobacter tengcongensis FT hypothetical protein Tte2521 SWALL:Q8R798 (EMBL:AE013193) FT (227 aa) fasta scores: E(): 7.2e-52, 69.3 id in 215 aa" FT /db_xref="GOA:A5HXT3" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5HXT3" FT /protein_id="CAL81591.1" FT /translation="MSNKIEKTPKRVPEIKGVLRSHMIEVPSIIREASGIRVFGKRIKS FT FVYSTDVAVIKNTNADAVIAVYPFTPQPIITQSLVLAADIPVFCGVGGGLTTGKRVVNL FT ALDAEFKGAMGVVINNPTPNDVLQQIKDTIDIPIVVTVVSEYEDIEARINSGATILNIS FT GAKKTAYIVREIRKRYPDFPIIATGGPNEASIKETIEAGANAITYTPPPASDIFSEVMD FT KYRVNFKKEHDREENEQS" FT CDS 43846..44634 FT /transl_table=11 FT /locus_tag="CBO0039" FT /product="putative 4Fe-4S ferredoxin" FT /note="Similar to Clostridium tetani putative FT polyferredoxin ctc00067 SWALL:Q899U9 (EMBL:AE015936) (258 FT aa) fasta scores: E(): 2.3e-44, 50.95 38d in 263 aa, and to FT Clostridium acetobutylicum polyferredoxin cac2657 FT SWALL:Q97FS0 (EMBL:AE007763) (249 aa) fasta scores: E(): FT 4.7e-20, 35.65 38d in 258 aa" FT /db_xref="GOA:A5HXT4" FT /db_xref="InterPro:IPR001226" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5HXT4" FT /protein_id="CAL81592.1" FT /translation="MNGMLFYFSGTGNTKWVADRIEDKLCKLDNTIHKVNIENLDDDVL FT IKIHNYDFIIIGTPIYAEMGPKLIQDFVNNIPKVKEKIKCILYSTQGGNSGCETESMHK FT ILCNKGYDVVIKVNIKMINNYYFSVGKKPDEAEMANILRDAEKKVDLVVDKFSKGEVYL FT ENINKTRLFLGKIASKGFNKFLPKLSNNLKSTEHCIKCGMCVRNCPKGNIVFENGGVVF FT HSNCILCLRCIYICPSNAIVYKEKRIDQIEKNIIKLLDIK" FT misc_feature 43858..43908 FT /note="PS00201 Flavodoxin signature." FT /inference="protein motif:ProSite:PS00201" FT misc_feature 44416..44487 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 23.5, E-value 5.1e-05" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 44437..44472 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 44500..44571 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 24.6, E-value 3.3e-05" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 44521..44556 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 45197..45901 FT /transl_table=11 FT /locus_tag="CBO0040" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani dinucleotide-utilizing FT enzyme ctc00868 SWALL:Q896X5 (EMBL:AE015939) (246 aa) fasta FT scores: E(): 1.3e-49,58.75 38d in 240 aa, and to FT Clostridium acetobutylicum dinucleotide-utilizing enzyme FT involved in molybdopterin and thiamine biosynthesis family FT 1 cac0908 SWALL:Q97KK9 (EMBL:AE007606) (251 aa) fasta FT scores: E(): 6.3e-46,58.87 38d in 248 aa" FT /db_xref="GOA:A5HXT5" FT /db_xref="InterPro:IPR000594" FT /db_xref="InterPro:IPR009036" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5HXT5" FT /protein_id="CAL81593.1" FT /translation="MENWLQRTEFLIGKEAIEKLNKSKIVVLGVGGVGSFVIEALVRSG FT VGNITIVDNDTIDITNINRQIHANLNTVGKSKVEVMKERILSINPNCNVKIHEEFINKD FT NISELVAKDTDYVVDAIDTASSKILSIVWCDKNNINIISSMGTANKLHPTKLRIADIYD FT TKVCPLAKIMRYELRKRNIKSLKVLYSEETPIKNNNRPLNDKGRPTPASIAFVPPCAGL FT IIAGEVVRDIIK" FT misc_feature 45257..45664 FT /note="Pfam match to entry PF00899 ThiF, ThiF family,score FT 150.1, E-value 4.2e-42" FT /inference="protein motif:Pfam:PF00899" FT CDS 45960..47093 FT /transl_table=11 FT /locus_tag="CBO0041" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe0058 SWALL:Q8XPA7 (EMBL:AP003185) (388 aa) fasta FT scores: E(): 1.7e-59, 40.9 38d in 374 aa, and to FT Caulobacter crescentus transporter, putative cc1133 FT SWALL:Q9A961 (EMBL:AE005791) (411 aa) fasta scores: E(): FT 4.9e-14, 23.01 38d in 352 aa" FT /db_xref="GOA:A5HXT6" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:A5HXT6" FT /protein_id="CAL81594.1" FT /translation="MLLYIFLTMILVAVCDSTRGIFIPIFKNEFNINNTKIGLMITIST FT LGYTVFTYLGGILCQKKGQKRVYSIGLLIISISFLLLNFTPNYIILIILMFLINGGQAF FT LAISSNTIIPIIFISFQAIIMNLAHFNYGMGLALSQRISGMLLYRGITWRRIYLYLSII FT TFIVYLLLFFINIPVINKSKDDNKLKSKEIFKDKLLYFYIFALGFYVFSEIATGNWFVN FT LMENGYRYNKNQSSYYIFLFSALFALGRLLGGFLVEKFNYIKAVCTSLAVALMMYTIGI FT TLGQKGLILISLSGIFFSIVYPTVVLTISKVYSTNSSYVTGIVVTLSSFVNMIISFLMG FT YLNDLIGIYTSYYLIPISLFISLMFMFLIHKNIKKLA" FT misc_feature order(45969..46037,46068..46136,46179..46247,46266..46334, FT 46425..46493,46551..46619,46662..46730,46743..46811, FT 46821..46889,46914..46982,46995..47063) FT /note="11 probable transmembrane helices predicted for FT CBO0041 by TMHMM2.0 at aa 4-26, 37-59, 74-96, FT 103-125,156-178, 198-220, 235-257, 262-284, 288-310, FT 319-341 and 346-368" FT /inference="protein motif:TMHMM:2.0" FT CDS 47122..48066 FT /transl_table=11 FT /locus_tag="CBO0042" FT /product="putative ribosomal-protein-alanine FT acetyltransferase" FT /note="Similar to Clostridium acetobutylicum FT ribosomal-protein-alanine acetyltransferase cac0152 FT SWALL:Q97MP0 (EMBL:AE007527) (312 aa) fasta scores: E(): FT 4.1e-60, 49.2 38d in 315 aa, and to Clostridium perfringens FT probable ribosomal-protein cpe0059 SWALL:Q8XPA6 FT (EMBL:AP003185) (312 aa) fasta scores: E(): 1.9e-53, 45.77 FT 38d in 308 aa, and to Escherichia coli,Escherichia coli FT O157:H7, and Shigella flexneri ribosomal-protein-alanine FT acetyltransferase RimJ or b1066 or z1703 or ecs1444 or FT sf1072 or s1150 SWALL:RIMJ_ECOLI (SWALL:P09454) (194 aa) FT fasta scores: E(): 3.4e-14, 39.39 id in 165 aa" FT /db_xref="GOA:A5HXT7" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HXT7" FT /protein_id="CAL81595.1" FT /translation="MNNKFKVSIELAKGTVDEYIVKDITGISIGRIFILELSKKNKYGC FT FRLNLYRDGENSNIYLNYILKDFLQYLFYKKEVCKINIIINENMNTNVFIEYGFYLEGI FT INDSRLIDGIKTSEFLFGLDIDTFRKANLYKELSIEGKNISLKLLTPINAQELLDYYIR FT NERHLKSYEPTRDKTFYTLKEQRDLLMDSYKQYLNGNSLEFGIYKDKKFIGKIKISNII FT MGIFKNCIVGYSIDKDFQGNGYMKEALKLLIDYTFNEIDIHRIEASTLIDNIRSQKVLE FT GCGFKKLGINEKYLYIDGKWQDHVTYYIVNNNI" FT rRNA 48480..49921 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT rRNA 50176..53077 FT /gene="23S rRNA" FT /product="23S ribosomal RNA" FT rRNA 53199..53315 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT tRNA 53322..53397 FT /gene="tRNA Lys (TTT)" FT /note="Cove score 84.68" FT /inference="nucleotide motif:tRNAscanSE" FT CDS complement(53621..54217) FT /transl_table=11 FT /locus_tag="CBO0042A" FT /product="uracyl DNA glycosilase" FT /note="Similar to Clostridium acetobutylicum uracyl DNA FT glycosilase cac0219 SWALL:Q97MH9 (EMBL:AE007535) (199 aa) FT fasta scores: E(): 5.7e-53, 67 38d in 197 aa, and to FT Clostridium tetani DNA polymerase, bacteriophage-type FT ctc00062 SWALL:Q899V2 (EMBL:AE015936) (173 aa) fasta FT scores: E(): 8.9e-41, 64.88 38d in 168 aa" FT /db_xref="InterPro:IPR005122" FT /db_xref="UniProtKB/TrEMBL:A5HXT8" FT /protein_id="CAL81596.1" FT /translation="MDIQESLKNKIKNISEEYVGDKTGGYITGDGPIPCDILFIGEAPG FT KNEVEEGKPFVGMAGKNFEKYLNSIGLKREFIRITNTCFFRPIKIKEGKNGRISISNRP FT PKVSEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLNRYV FT FPMYHPSALTYNRSEEFHKIYENDWVKLREALGKI" FT rRNA 55108..56549 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT tRNA 56726..56801 FT /gene="tRNA Ala (TGC)" FT /note="Cove score 93.93" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 56807..56883 FT /gene="tRNA Ile (GAT)" FT /note="Cove score 99.73" FT /inference="nucleotide motif:tRNAscanSE" FT rRNA 56957..59858 FT /gene="23S rRNA" FT /product="23S ribosomal RNA" FT rRNA 59991..60107 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT tRNA 60114..60189 FT /gene="tRNA Lys (TTT)" FT /note="Cove score 84.68" FT /inference="nucleotide motif:tRNAscanSE" FT CDS 60532..61095 FT /transl_table=11 FT /locus_tag="CBO0043" FT /product="putative RNA polymerase sigma factor" FT /note="Similar to Clostridium tetani RNA polymerase sigma FT factor ctc01788 SWALL:Q893M7 (EMBL:AE015942) (212 aa) fasta FT scores: E(): 2.1e-44, 65.95 38d in 188 aa, and to FT Clostridium acetobutylicum predicted sigma factor cac1766 FT SWALL:Q97I86 (EMBL:AE007685) (185 aa) fasta scores: E(): FT 2.2e-20, 37.64 38d in 178 aa" FT /db_xref="GOA:A5HXT9" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:A5HXT9" FT /protein_id="CAL81597.1" FT /translation="MKIDEDNFITQLKYKNSKALDFIVEEYSNIVFKIIRTVLNSNFHS FT QYVEECANDVFWSVWSNIDSFDENKGNFKHWIAAISKYKAIDYKRKLFKQNNIESIDDH FT ILCGDTSIEKDFILNENKEEIFEVMNYMKKEDREIFIRRYFLDEKVENIAKILGVNRNL FT IDKRLSRGRKFLREKLILLKGEIL" FT misc_feature 60598..60816 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 26.4, E-value 6.8e-05" FT /inference="protein motif:Pfam:PF04542" FT CDS 61092..62534 FT /transl_table=11 FT /locus_tag="CBO0043A" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc01787 SWALL:Q893M8 (EMBL:AE015942) (477 aa) fasta FT scores: E(): 5.7e-98, 58.62 38d in 481 aa, and to Bacillus FT anthracis conserved domain protein ba1754 SWALL:Q81SB1 FT (EMBL:AE017029) (366 aa) fasta scores: E(): 9.9e-18, 27.1 FT id in 380 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXU0" FT /protein_id="CAL81598.1" FT /translation="MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKK FT NLNNKIKRKNRSNNLKYTSIAAAITLVFSIGIVTTSPTFAKNIPVLNSIMQTLNNKYGN FT RGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGGFLK FT IDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPENKKFNIDVNITEVSDIKGKWNFAFS FT ASKEEISRESTVFKPNQKLDLPDSNGTIHKVVFSPIDTSIFITGYGKNKNIKAGPNGGM FT FDYNYWIAFDDTGVELIPKGIGGGECDFNKNTFSSEMQYEKSKSIPKYLTIIPCKITPL FT GGGGVKRDENGKEMPITIQTKKPKEIGKTIDGVYPIELSQGKMGKLIINDIKTENNKTI FT VKYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTI FT FTNNFDNVEFREDLKFKIELNK" FT misc_feature 61275..61343 FT /note="1 probable transmembrane helix predicted for CBO0043 FT by TMHMM2.0 at aa 62-84" FT /inference="protein motif:TMHMM:2.0" FT rRNA 63206..64647 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT rRNA 64902..67803 FT /gene="23S rRNA" FT /product="23S ribosomal RNA" FT rRNA 67909..68025 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT tRNA 68033..68108 FT /gene="tRNA Phe (GAA)" FT /note="Cove score 85.71" FT /inference="nucleotide motif:tRNAscanSE" FT CDS 68317..68508 FT /pseudo FT /transl_table=11 FT /gene="dltB" FT /locus_tag="CBO0044" FT /product="putative transporter of activated D-alanine FT (partial)" FT /note="Similar to an internal region of Bacillus subtilis FT protein DltB or Ipa-4r or bsu38510 SWALL:DLTB_BACSU FT (SWALL:P39580) (395 aa) fasta scores: E(): 2.1, 36.58 38d FT in 41 aa, and to Streptococcus pyogenes DltB-like protein FT SWALL:Q9RIK3 (EMBL:U31918) (158 aa) fasta scores: E(): FT 0.25, 42.5 38d in 40 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL81599.1" FT CDS 68655..68936 FT /transl_table=11 FT /locus_tag="CBO0045" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HXU2" FT /protein_id="CAL81600.1" FT /translation="MNISELQFYKFMFNKSIDKSYKVRASKRINLLLANSMDSIHIKSF FT LHLYSKDNIFTEGLLTIMIPYYKFKHYLLSIKDKNMDENPKVKNFDWI" FT CDS 68937..69329 FT /pseudo FT /transl_table=11 FT /gene="dltD" FT /locus_tag="CBO0046" FT /product="putative transporter of activated D-alanine FT (partial)" FT /note="Similar to Bacillus subtilis protein dltd precursor FT DltD or Ipa-2r or bsu38530 SWALL:DLTD_BACSU (SWALL:P39578) FT (392 aa) fasta scores: E(): 4.3e-12, 40.67 38d in 118 FT aa,and to Bacillus anthracis dltd protein DltD-2 or ba2846 FT SWALL:Q81PG1 (EMBL:AE017033) (393 aa) fasta scores: E(): FT 3e-13, 43.33 38d in 120 aa" FT /note="was marked partial" FT rRNA 70265..71706 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT rRNA 71960..74861 FT /gene="23S rRNA" FT /product="23S ribosomal RNA" FT rRNA 74914..75030 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT tRNA 75038..75113 FT /gene="tRNA Phe (GAA)" FT /note="Cove score 85.71" FT /inference="nucleotide motif:tRNAscanSE" FT CDS 75254..75997 FT /transl_table=11 FT /locus_tag="CBO0047" FT /product="putative peptidyl-prolyl cis-trans isomerase" FT /db_xref="GOA:A5HXU3" FT /db_xref="InterPro:IPR000297" FT /db_xref="InterPro:IPR008880" FT /db_xref="InterPro:IPR023058" FT /db_xref="UniProtKB/TrEMBL:A5HXU3" FT /protein_id="CAL81602.1" FT /translation="MENNIVAIVNGQEITDRDVDNTILSFPKERQTYLNTEKGREELIK FT QMIDFELSYNYAKDMKFDETEDFKKQLEATKKQLLIQVAVSNALARATVSEEESKKYYE FT ENKEEFRTQELITARHILVDSEEEANNIYEEIKNGLDFSEAAEKYSKCPSKAQGGSLGT FT FTRGQMVPEFEKAVLEAEVDKVTQAIKTQFGYHLIIVDNIKESMIKPFDEVKAMIDNKL FT LQEKQNQQYNEFTQNLRDKYTVEIK" FT misc_feature 75590..75859 FT /note="Pfam match to entry PF00639 Rotamase, PPIC-type FT PPIASE domain, score 111.1, E-value 2.3e-30" FT /inference="protein motif:Pfam:PF00639" FT misc_feature 75677..75739 FT /note="PS01096 PpiC-type peptidyl-prolyl cis-trans FT isomerase signature." FT /inference="protein motif:ProSite:PS01096" FT rRNA 76546..77987 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT rRNA 78242..81143 FT /gene="23S rRNA" FT /product="23S ribosomal RNA" FT rRNA 81249..81365 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT CDS 81736..82479 FT /transl_table=11 FT /locus_tag="CBO0048" FT /product="putative regulatory protein" FT /note="Similar to Clostridium tetani regulatory FT protein,Sir2 family ctc00216 SWALL:Q899G3 (EMBL:AE015936) FT (247 aa) fasta scores: E(): 3.6e-61, 65.84 38d in 243 aa, FT and to Clostridium perfringens probable transcriptional FT regulator cpe0256 SWALL:Q8XNS6 (EMBL:AP003186) (244 aa) FT fasta scores: E(): 5.7e-55, 63.52 38d in 244 aa" FT /db_xref="GOA:A5HXU4" FT /db_xref="InterPro:IPR003000" FT /db_xref="UniProtKB/TrEMBL:A5HXU4" FT /protein_id="CAL81603.1" FT /translation="MRLEKLKHIIDNSENIVFLGGAGVSTESNIPDFRSNNGLYKSKNN FT LNYSPETILSHSFFKNNAKEFFQFYKDKMIFKDAKPNLAHYALTELEQIGKLKTIITQN FT IDGLHQLSGAKNVLELHGSVHRNYCVNCGEKYNLDYILNTENSSEDIPYCKKCGSIVRP FT DVVLYEEGLDMDTISKAIYYIQNADVLIVGGTSLVVYPAAGLVNYYKGKKLVLINKAET FT PYDKKADLVIHDSIGSVLEKVIKKN" FT misc_feature 81796..82338 FT /note="Pfam match to entry PF02146 SIR2, Sir2 family,score FT 231.9, E-value 9.9e-67" FT /inference="protein motif:Pfam:PF02146" FT tRNA 82561..82634 FT /gene="tRNA Cys (GCA)" FT /note="Cove score 75.27" FT /inference="nucleotide motif:tRNAscanSE" FT CDS complement(82665..83573) FT /transl_table=11 FT /locus_tag="CBO0049" FT /product="putative muramoyl-tetrapeptide carboxypeptidase" FT /note="Similar to Clostridium acetobutylicum MccF-like FT protein cac0293 SWALL:Q97MA5 (EMBL:AE007544) (306 aa) fasta FT scores: E(): 1.5e-62, 56.18 38d in 299 aa, and to FT Clostridium perfringens hypothetical protein Cpe2458 FT SWALL:Q8XHM5 (EMBL:AP003194) (302 aa) fasta scores: E(): FT 3.3e-38, 47.81 38d in 297 aa" FT /db_xref="GOA:A5HXU5" FT /db_xref="InterPro:IPR003507" FT /db_xref="UniProtKB/TrEMBL:A5HXU5" FT /protein_id="CAL81604.1" FT /translation="MLLKHLNKGDTIGIVSPASPIEKDVVLKNIQVFKNLGFNIKLSNH FT VYDKYGYLSGKDIDRANDLMDMFIDPSVYMILCSRGGYGSMRMLPYLDFNIIKNNPKIF FT GGFSDITVLLNYITSKCGFTTFHCPMLSSNFNNIYTLKNFLEPLMNDFTSFEISNPNFV FT PLLSQTNDIVEGNLVGGNLSLICNTLGTPYEIDTMDNILFLEEISEPPYKIDRMLTQLI FT LSGKIKSCSGLILGQFTNCNINDCENDFSLDEVILDRLLSSNKPIISNLMSGHCDPNVT FT LPIGSKIRLDCKNKLIKILNY" FT misc_feature complement(83139..83342) FT /note="Pfam match to entry PF02016 FT Peptidase_U61,LD-carboxypeptidase, score 110.0, E-value FT 4.9e-30" FT /inference="protein motif:Pfam:PF02016" FT CDS complement(83609..84550) FT /transl_table=11 FT /locus_tag="CBO0050" FT /product="probable transporter" FT /note="Similar to Clostridium perfringens probable FT transport protein cpe2457 SWALL:Q8XHM6 (EMBL:AP003194) (314 FT aa) fasta scores: E(): 1.1e-77, 69.1 38d in 314 aa,and to FT Clostridium acetobutylicum magnesium and cobalt transporter FT cac0294 SWALL:Q97MA4 (EMBL:AE007544) (315 aa) fasta scores: FT E(): 1.1e-77, 66.03 38d in 315 aa" FT /db_xref="GOA:A5HXU6" FT /db_xref="InterPro:IPR002523" FT /db_xref="UniProtKB/TrEMBL:A5HXU6" FT /protein_id="CAL81605.1" FT /translation="MISIYKNTEQDKTIKKLDNIEPGTWINIVSPSEQELIFVSKKTGV FT SLDFLKASLDEEETSRIDIEDNNMIVILDIPFTEMEDNSLTYDTYPLAIINTPNNIITV FT CLKNSKILTDFFNNKVKSFYTFKRSRFILQILYRVASYFLLYLRQIDKKSVMIEKKLHK FT SMKNRELILLLSLEKSLVYFSTSLKANEITLEKMLKLDIIQRYPEDQDILEDVIIENKQ FT AIEMANIYSNILSGTMDAFASVISNNLNIVMKLLASITIVMSIPNIIFGSFGMNLNGIP FT FSKSSQGFGLACGVTVILCIVCIIILKKKDLF" FT misc_feature complement(83612..84484) FT /note="Pfam match to entry PF01544 CorA, CorA-like Mg2+ FT transporter protein, score 20.8, E-value 6.2e-09" FT /inference="protein motif:Pfam:PF01544" FT misc_feature complement(order(83630..83689,83732..83800)) FT /note="2 probable transmembrane helices predicted for FT CBO0050 by TMHMM2.0 at aa 251-273 and 288-307" FT /inference="protein motif:TMHMM:2.0" FT CDS 84915..85418 FT /transl_table=11 FT /locus_tag="CBO0051" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00217 SWALL:Q899G2 (EMBL:AE015936) (166 aa) fasta FT scores: E(): 3.1e-22, 42.51 38d in 167 aa, and to FT Clostridium perfringens hypothetical protein Cpe2456 FT SWALL:Q8XHM7 (EMBL:AP003194) (165 aa) fasta scores: E(): FT 4.5e-18, 38.12 38d in 160 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXU7" FT /protein_id="CAL81606.1" FT /translation="MGNMYKETVARRTVPVLFFMLILLVGILFLVEFLKSIKFYGYKLD FT EILNIFLLSIVILVSFLEVFKFKIKYSYFIIADQFIIHKIKGNYDKVVENIKLKDIIYF FT DKCAGLRSKIDISKSKKYTCSLLDRDTYCCVYKDGNSTKKFYFEPSNNLITKIKYLSNK FT RLAS" FT misc_feature order(84951..85010,85053..85109) FT /note="2 probable transmembrane helices predicted for FT CBO0051 by TMHMM2.0 at aa 13-32 and 47-65" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(85423..86583) FT /transl_table=11 FT /locus_tag="CBO0052" FT /product="putative amidohydrolase" FT /note="Similar to Staphylococcus aureus HmrA or mw2057 FT SWALL:Q8NVF8 (EMBL:AP004829) (394 aa) fasta scores: E(): FT 4.7e-30, 28.68 38d in 387 aa, and to Clostridium tetani FT amidohydrolase ctc00218 SWALL:Q899G1 (EMBL:AE015936) (392 FT aa) fasta scores: E(): 1.3e-71, 50.39 38d in 383 aa, and to FT Escherichia coli aminobenzoyl-glutamate utilization protein FT b abgb or b1337 SWALL:ABGB_ECOLI (SWALL:P76052) (481 aa) FT fasta scores: E(): 0.0002, 25.46 38d in 326 aa" FT /db_xref="GOA:A5HXU8" FT /db_xref="InterPro:IPR017144" FT /db_xref="UniProtKB/TrEMBL:A5HXU8" FT /protein_id="CAL81607.1" FT /translation="MKQKIVSYLKSIESDLFNISKYLYDNPETSFNEYKSCKYLIDILK FT KNNFNVQENYYNIPTSFYAEFGKGYPKICFFCEYDAPSEIGHVSGHNLVSSISLGAALS FT LSKVIDNFSGTIIVMGTPGESLSGSKVTLAKQGAFKDIDVGLMIHPDEVTCQSGSSMAI FT LPLKIKFRGKETLSYENTNVFSSLNGLLYTFNSINLLKQSINKNFHIDKLVINSGKDPY FT ISSNTTEAKFYIRSKSISTAIYVENRIRKIVDNVNSLLNLDSEICFFELPYRELITNKR FT LSRLFCHNLKEAGIIDICNEKNTVSGLSLGTVSHYIPCIHPYISILDKNSSINYFTKEF FT ADETLTKHAQQNALKASQALSLTALDLIQNDMLLKEVKKEFFNKIE" FT CDS 86837..87049 FT /transl_table=11 FT /locus_tag="CBO0052A" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR019700" FT /db_xref="UniProtKB/TrEMBL:A5HXU9" FT /protein_id="CAL81608.1" FT /translation="MKKQYCIICGKPLNSGIIINRKGICDVCEERMVNSDMSTDFYEFY FT KKCIRKNLVQTFIKDEEMRWENYRF" FT CDS 87028..88476 FT /transl_table=11 FT /locus_tag="CBO0053" FT /product="lysine decarboxylase" FT /EC_number="4.1.1.18" FT /note="Similar to Bacillus subtilis lysine decarboxylase FT Cad or bsu14630 SWALL:DCLY_BACSU (SWALL:P21885) (490 aa) FT fasta scores: E(): 1.9e-43, 31.13 38d in 485 aa, and to FT Clostridium acetobutylicum lysine decarboxylase cac0297 FT SWALL:Q97MA1 (EMBL:AE007544) (481 aa) fasta scores: E(): FT 7.2e-94, 53.95 38d in 480 aa" FT /db_xref="GOA:A5HXV0" FT /db_xref="InterPro:IPR000310" FT /db_xref="InterPro:IPR008286" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5HXV0" FT /protein_id="CAL81609.1" FT /translation="MGELPILNGVLKYIKEKNILFSMPGHKGSLGFLFTKEGKKFCENM FT PQCDLTEVEGLDNLHNSEGIIKESGYLLSRFYNSKKSYFLVNGSTSGNLAMIFSCFKEE FT DKIIVERNCHRSIFNGIIMRKLKPIYIKNKVYRQFNAPLSIDLEHFLSLIKENKDAKGI FT VITYPNYYGVCPNLKVIIKEAKKYDMKVLIDSAHGAHFGVCEKLPKSALELGADMVVMS FT AHKTLPSLTQTAFLHIGKDSIIDINKVDFYISAFSSTSPSYLFLCSMDYSRFYLEKYGQ FT EHYNELINRANYYRKKINLLDSFYVLNHSDIKHLNLKYKDVMDIDLTRYTINIKNGLNA FT NCLSKYLRECGIQCEMSDGNNIILILSPFYNEDVMDRLYESLYEWDKNYNKDKYNYNIN FT YNYIETNMNMYPYEVLEKEYLWIDYKDSLGKISYNNIVPYPPGVPIIMAGEIINKEIID FT AICYYKNNGIDALGLKDNKIQIVK" FT misc_feature 87040..88200 FT /note="Pfam match to entry PF01276 OKR_DC_1, Orn/Lys/Arg FT decarboxylase, major domain, score 228.0, E-value 1.4e-65" FT /inference="protein motif:Pfam:PF01276" FT misc_feature 88006..88071 FT /note="Predicted helix-turn-helix motif with score 984.000, FT SD 2.54 at aa 327-348, sequence LTRYTINIKNGLNANCLSKYLR" FT misc_feature 88123..88470 FT /note="Pfam match to entry PF03711 OKR_DC_1_C, Orn/Lys/Arg FT decarboxylase, C-terminal domain, score -4.1, E-value FT 0.00071" FT /inference="protein motif:Pfam:PF03711" FT CDS 88500..89195 FT /transl_table=11 FT /locus_tag="CBO0054" FT /product="thymidylate kinase" FT /EC_number="2.7.4.9" FT /note="Similar to Clostridium tetani thymidylate kinase FT ctc00220 SWALL:Q899F9 (EMBL:AE015936) (228 aa) fasta FT scores: E(): 5.8e-52, 62.16 38d in 222 aa, and to FT Fusobacterium nucleatum subsp. vincentii ATCC 49256 FT thymidylate kinase fnv0225 SWALL:EAA23262 FT (EMBL:AABF01000172) (228 aa) fasta scores: E(): FT 9.6e-42,51.54 38d in 227 aa" FT /db_xref="GOA:A5HXV1" FT /db_xref="InterPro:IPR018094" FT /db_xref="UniProtKB/TrEMBL:A5HXV1" FT /protein_id="CAL81610.1" FT /translation="MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKS FT ESSALIKMYLSGEFGRNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTT FT SNMIHQAAKIKDVQAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNK FT FTGEKEKDIHENNYEYLLESYNNSKYISEKYDWNRIECTNKDKIKSIDQINDDIIKIIT FT QYIDFSEQR" FT misc_feature 88524..89117 FT /note="Pfam match to entry PF02223 FT Thymidylate_kin,Thymidylate kinase, score 11.7, E-value FT 1.6e-05" FT /inference="protein motif:Pfam:PF02223" FT misc_feature 88719..88748 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT CDS 89276..89605 FT /transl_table=11 FT /locus_tag="CBO0055" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum protein from FT nitrogen regulatory protein P-II cac0299 SWALL:Q97M99 FT (EMBL:AE007544) (109 aa) fasta scores: E(): 4.1e-29,76.14 FT 38d in 109 aa, and to Clostridium perfringens hypothetical FT protein Cpe2450 SWALL:Q8XHN3 (EMBL:AP003194) (109 aa) fasta FT scores: E(): 7.9e-23, 60.55 38d in 109 aa" FT /db_xref="InterPro:IPR010375" FT /db_xref="InterPro:IPR011322" FT /db_xref="UniProtKB/TrEMBL:A5HXV2" FT /protein_id="CAL81611.1" FT /translation="MKLVIAIVQDDDASDLIDEITEEGFRVTKLATTGGFLKAGNTTLM FT IGVEEKDVDRLIKKVEDICKTRKQIVTAPSPINGSTGMYVSYPIEVEVGGATIFVVDVD FT KFARV" FT misc_feature 89276..89602 FT /note="Pfam match to entry PF06153 DUF970, Protein of FT unknown function (DUF970), score 237.2, E-value 2.5e-68" FT /inference="protein motif:Pfam:PF06153" FT CDS 89623..90567 FT /transl_table=11 FT /locus_tag="CBO0056" FT /product="DNA polymerase III, delta' subunit" FT /EC_number="2.7.7.7" FT /note="Similar to Escherichia coli DNA polymerase FT III,delta' subunit HolB or b1099 SWALL:HOLB_ECOLI FT (SWALL:P28631) (334 aa) fasta scores: E(): 1.3e-05, 22.05 FT id in 263 aa, and to Clostridium tetani DNA polymerase III FT delta subunit ctc00221 SWALL:Q899F8 (EMBL:AE015936) (322 FT aa) fasta scores: E(): 1.1e-52, 53.35 38d in 313 aa" FT /db_xref="GOA:A5HXV3" FT /db_xref="UniProtKB/TrEMBL:A5HXV3" FT /protein_id="CAL81612.1" FT /translation="MDSHTIIGHENIKNRIKNSIIKGKFPHASIIVGEDGIGKSIIAKE FT MAMIILEKSQQRSYADLIEFKPINKKSIGIDDIRNLIEEINKKPIEGNKKVIIIYKSEL FT ITEVAQNAFLKTIEEPPKGVYIILLCENMEQMLDTIKSRCEIFKLNRLKPCDIENFIKY FT KYKDIKKENINSAIAFSDGIPGKAERFIEDESLKYIRDMSLGILKDSKDLSNYNYLIKY FT ENFLINYKENWEEILTCILSYLRDSLLFKETGDEELLLNVDKKEYIKHISEKYSYINLD FT KMVSIINDTRDKLSKNINSTLVFDAMLIKMQEV" FT misc_feature 89719..89742 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 90569..91483 FT /transl_table=11 FT /locus_tag="CBO0057" FT /product="putative signal peptidase II" FT /note="Similar to Treponema pallidum Tpl protein or tp0046 FT SWALL:TPL_TREPA (SWALL:P45685) (233 aa) fasta scores: E(): FT 5.7e-21, 37.68 38d in 207 aa, and to Clostridium tetani Tpl FT protein ctc00222 SWALL:Q899F7 (EMBL:AE015936) (302 aa) FT fasta scores: E(): 6.2e-79, 72.36 38d in 304 aa" FT /db_xref="InterPro:IPR007557" FT /db_xref="UniProtKB/TrEMBL:A5HXV4" FT /protein_id="CAL81613.1" FT /translation="MIEVVGVRFKKAGKIYYFDPSNIEINKGEYVIVETIRGIEFGEAV FT IAKKQINESEIVAPLKNVIRKATEEDIKKHHENKEKEKYALETCLQKIQEHKLNMKLID FT VEYTFDNNKVIFYFTADGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGPCGR FT PMCCSIFLGDFAPVSIKMAKEQNLSLNPTKISGICGRLMCCLNYEQQTYESIRKVLPKI FT GSIVKTPYGQGEVVDNNVVKEEVKVKIKSEDNEEFIQPVPIIEAELISGGYEGNIESVD FT EEEINIEIDDADETIIKELLKDE" FT misc_feature 90743..91006 FT /note="Pfam match to entry PF04468 PSP1, PSP1 C-terminal FT conserved region, score 187.2, E-value 2.8e-53" FT /inference="protein motif:Pfam:PF04468" FT CDS 91495..91698 FT /transl_table=11 FT /locus_tag="CBO0058" FT /product="putative metal-binding protein" FT /note="Similar to Pseudomonas sp periplasmic mercuric ion FT binding protein MerP SWALL:Q936U4 (EMBL:Y18360) (92 aa) FT fasta scores: E(): 0.64, 36.95 38d in 46 aa, and to FT Clostridium acetobutylicum predicted metal-binding protein FT of ferredoxin fold cac0302 SWALL:Q97M96 (EMBL:AE007544) (67 FT aa) fasta scores: E(): 7.5e-09, 43.28 38d in 67 aa" FT /db_xref="GOA:A5HXV5" FT /db_xref="InterPro:IPR006121" FT /db_xref="UniProtKB/TrEMBL:A5HXV5" FT /protein_id="CAL81614.1" FT /translation="MKALLKVWDMRTIQDINKVKSAVANNEGVVACEISKEKKEVSVIY FT DDYFVDVDKIIESIENIGYTVI" FT misc_feature 91504..91695 FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 11.0, E-value FT 0.071" FT /inference="protein motif:Pfam:PF00403" FT CDS 91780..91950 FT /transl_table=11 FT /locus_tag="CBO0059" FT /product="ferredoxin" FT /note="Similar to Clostridium pasteurianum ferredoxin FT SWALL:FER_CLOPA (SWALL:P00195) (55 aa) fasta scores: E(): FT 1.6e-18, 90.9 38d in 55 aa" FT /db_xref="GOA:A5HXV6" FT /db_xref="InterPro:IPR000813" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5HXV6" FT /protein_id="CAL81615.1" FT /translation="MAYKITDACVSCGACAAECPVNAISQGDSIFDIDADTCIDCGNCA FT NVCPVGAPVQD" FT misc_feature 91783..91854 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 34.4, E-value 2.8e-07" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 91804..91839 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 91870..91941 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 33.1, E-value 6.9e-07" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 91891..91926 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 92071..92811 FT /transl_table=11 FT /locus_tag="CBO0060" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum SAM-dependent FT methyltransferase cac0306 SWALL:Q97M92 (EMBL:AE007545) (244 FT aa) fasta scores: E(): 1e-56, 61.47 38d in 244 aa,and to FT Clostridium perfringens hypothetical protein Cpe0279 FT SWALL:Q8XNQ3 (EMBL:AP003186) (256 aa) fasta scores: E(): FT 1e-52, 57.61 38d in 243 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXV7" FT /protein_id="CAL81616.1" FT /translation="MDRIIKEDETLDDLQLKGIHVIQKKQAFRFGIDAVLLANFPTIKN FT GAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSIKYNNLQEKVKFIEGD FT LKNLKLLKDIEKVDVVTVNPPYKTQGTGIININDKNAISRHEICCTLDDVVKAAKVLLK FT DKGKLYMIHRPDRIVDIMNVMRKYYIEPKLIRTIHPAVDKAPSMILIEGQKNGGKFLKW FT DRPLYIYDENNKYTNEVKRIYGIE" FT CDS 92831..93685 FT /transl_table=11 FT /locus_tag="CBO0061" FT /product="putative corrin/porphyrin methyltransferase" FT /EC_number="2.1.1.-" FT /note="Similar to Clostridium tetani corrin/porphyrin FT methyltransferase ctc00226 SWALL:Q899F5 (EMBL:AE015936) FT (281 aa) fasta scores: E(): 2.6e-62, 63.79 38d in 279 FT aa,and to Clostridium perfringens hypothetical protein FT Cpe0280 SWALL:Q8XNQ2 (EMBL:AP003186) (280 aa) fasta scores: FT E(): 9.9e-63, 64.02 38d in 278 aa" FT /db_xref="GOA:A5HXV8" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR008189" FT /db_xref="InterPro:IPR014777" FT /db_xref="InterPro:IPR018063" FT /db_xref="UniProtKB/TrEMBL:A5HXV8" FT /protein_id="CAL81617.1" FT /translation="MLNIEEGKLYVVPTPIGNLRDITIRALDVLEDVDIIAAEDTRQTL FT KLLNHFNIKKTLISYHKFNEEDKSINIINNLKEGKKIALVSDAGMPGISDPGYVLIKKC FT IEEQIIFEVLPGATAFTTALVYSGMDTTKFIFKGFIPRENKNRQKLIQDIKDRMETLIF FT YESPHRLKECLKFLRDSLGNRNISICRELTKLHEEIIRDSLEEVIKYYENKQPKGEYVL FT VLQGKSIEEIEKEKEMEWSSINIQDHIKKYINEGYSKKESIKLVAKDRKITKSEVYKYS FT IDI" FT misc_feature 92852..93454 FT /note="Pfam match to entry PF00590 FT TP_methylase,Tetrapyrrole (Corrin/Porphyrin) Methylases, FT score 149.7,E-value 5.3e-42" FT /inference="protein motif:Pfam:PF00590" FT misc_feature 93086..93121 FT /note="PS01296 Uncharacterized protein family UPF0011 FT signature." FT /inference="protein motif:ProSite:PS01296" FT CDS 93841..94944 FT /transl_table=11 FT /locus_tag="CBO0062" FT /product="putative exported peptidoglycan lytic protein" FT /note="Similar to Listeria monocytogenes p45 precursor spl FT or lmo2505 SWALL:Q9RE04 (EMBL:AJ250194) (401 aa) fasta FT scores: E(): 2.4e-15, 31.18 38d in 388 aa, and to FT Clostridium acetobutylicum cell wall-associated hydrolase FT cac0308 SWALL:Q97M90 (EMBL:AE007545) (392 aa) fasta scores: FT E(): 2.2e-27, 36.84 38d in 380 aa" FT /db_xref="InterPro:IPR000064" FT /db_xref="UniProtKB/TrEMBL:A5HXV9" FT /protein_id="CAL81618.1" FT /translation="MNKKVLSAVIALALAVSINAKVMAAPSSGQAHDKTLELEEKIQNM FT DNSIQNLMYKIEDNNKDIEKNKEDISKLGKDIEKAQKQIESREDLFNKRVRAMYISGFD FT SYADIILESKGLSDLITRVDTVKKVMGFDQGVIKELKTKKEEIKEKKVALDKKSTEIVQ FT LKAENEKKLSSMKSEKTKQEVVLKDLRDQEIKAAAEAAQKKAAERQVAQSQASVSQSRG FT GNSVSVEAPASSGSSSSSSSSNSSNKPSNPAPPATHGDVVGYAMQFKGVPYVWGGTSPS FT GFDCSGFVQYVYRNAAGIELPRDTYGQIGAGTRVSQDQLQPGDLVFPHTGHVGIYIGGG FT QMIHAPQTGDVVKISSVWKFYAGVRVR" FT sig_peptide 93841..93910 FT /locus_tag="CBO0062" FT /note="probabilty 1.000, with cleavage site probability FT 0.730 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT misc_feature 94648..94938 FT /note="Pfam match to entry PF00877 NLPC_P60, NlpC/P60 FT family, score 171.2, E-value 1.8e-48" FT /inference="protein motif:Pfam:PF00877" FT CDS complement(95044..95289) FT /transl_table=11 FT /gene="abrB" FT /gene_synonym="cpsX" FT /locus_tag="CBO0063" FT /product="transition state regulatory protein" FT /note="Similar to Bacillus subtilis transition state FT regulatory protein AbrB or CpsX or bsu00370 FT SWALL:ABRB_BACSU (SWALL:P08874) (96 aa) fasta scores: E(): FT 1.4e-12, 74.19 38d in 62 aa, and to Clostridium FT acetobutylicum transition state regulatory protein AbrB FT cac3647 SWALL:Q97D34 (EMBL:AE007860) (81 aa) fasta scores: FT E(): 1.2e-26, 90.12 38d in 81 aa" FT /db_xref="InterPro:IPR006339" FT /db_xref="InterPro:IPR007159" FT /db_xref="UniProtKB/TrEMBL:A5HXW0" FT /protein_id="CAL81619.1" FT /translation="MKSTGVVRRVDELGRIVIPIELRRTLDIAEKDALEIYVDGEQIIL FT KKYEPACIFCGDARDVINYKGKNICKNCLNEIKDNK" FT misc_feature complement(95104..95271) FT /note="Pfam match to entry PF04014 SpoVT_AbrB, SpoVT / AbrB FT like domain, score 58.0, E-value 2.2e-14" FT /inference="protein motif:Pfam:PF04014" FT CDS 96096..96707 FT /transl_table=11 FT /locus_tag="CBO0064" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe0282 SWALL:Q8XNQ0 (EMBL:AP003186) (199 aa) fasta FT scores: E(): 9.2e-42, 63.59 38d in 195 aa, and to FT Clostridium acetobutylicum uncharacterized protein homolog FT ykrk b. subtilis cac0314 SWALL:Q97M84 (EMBL:AE007546) (197 FT aa) fasta scores: E(): 6.5e-41, 59.89 38d in 187 aa" FT /db_xref="InterPro:IPR014975" FT /db_xref="UniProtKB/TrEMBL:A5HXW1" FT /protein_id="CAL81620.1" FT /translation="MENNNLEKIEYINKLAKEISNNTIVDYEDFPKYDLFLSQVIDYLN FT DKFEEEDYTNNIVQNYIKNEVISKPQDGKKRGYTKLHLVQLVLLSYMRPLLTTEEIKNV FT FTLAFNEINDRGDDIISWENAYKIFSDIQKDSFKDFVARQHFDEDKLKDIITKLELNSD FT EENRITIFLIVMTLICQASAIKKLVKKIVNDYTDKLDYNE" FT CDS 97129..98340 FT /transl_table=11 FT /gene="arcA1" FT /locus_tag="CBO0065" FT /product="arginine deiminase" FT /EC_number="3.5.3.6" FT /note="Similar to Enterococcus faecalis arginine deiminase FT ArcA or ef0104 SWALL:Q93K67 (EMBL:AJ312276) (408 aa) fasta FT scores: E(): 1.6e-80, 55.06 38d in 405 aa, and to Bacillus FT licheniformis arginine deiminase ArcA SWALL:ARCA_BACLI FT (SWALL:O86131) (413 aa) fasta scores: E(): 3.7e-77, 51.22 FT id in 408 aa" FT /note="Also similar to CBO1587 (57.03 38d)." FT /db_xref="GOA:A5HXW2" FT /db_xref="InterPro:IPR003198" FT /db_xref="InterPro:IPR003876" FT /db_xref="UniProtKB/TrEMBL:A5HXW2" FT /protein_id="CAL81621.1" FT /translation="MNTKRNIHVYSEIGDLRTVLLHRPGEEIENLIPAYMETLLFDDIP FT YLKVAQEEHDIFADTLRSNGVEVLYLEDLAAEAIQNKEIREKFIEEAIKESGTTDKTYL FT EKIKKYLESMKEKELVCKIMAGIRRKELGIDESKEEYPFLMYPMPNLYFTRDPFASIGK FT GITINAMRTKTRRRETMFAKYIFKYHPEFKDSDIPLWYDRTGEHCIEGGDELVLSDEVL FT AIGHSERTDSESVLKVAKNIFEAGESFKVILLFDIPKIRAFMHLDTVFTMLDHDKFTVH FT GEIEGTLKVNAITYDEKTKELVIKEEIDSLEGILSKYLKRDIKVIRCGGGDKIISAREQ FT WNDGSNTLAISPGKVITYERNYVTNEILDKNNVEVLTIPSSELSRGRGGPRCMSMPLFR FT KDLK" FT misc_feature 97159..98325 FT /note="Pfam match to entry PF02274 FT Amidinotransf,Amidinotransferase, score 570.6, E-value FT 1.1e-168" FT /inference="protein motif:Pfam:PF02274" FT CDS complement(98426..98893) FT /transl_table=11 FT /gene="ispF" FT /locus_tag="CBO0066" FT /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate FT synthase" FT /EC_number="4.6.1.12" FT /note="Similar to Bacillus subtilis 2-C-methyl-D-erythritol FT 2,4-cyclodiphosphate synthase IspF or bsu00910 FT SWALL:ISPF_BACSU (SWALL:Q06756) (158 aa) fasta scores: E(): FT 1.3e-32, 60.13 38d in 153 aa, and to Clostridium FT perfringens 2-C-methyl-D-erythritol 2,4-cyclodiphosphate FT synthase IspF or cpe2316 SWALL:ISPF_CLOPE (SWALL:Q8XI08) FT (156 aa) fasta scores: E(): 2.9e-38, 69.48 38d in 154 aa" FT /db_xref="GOA:A5HXW3" FT /db_xref="InterPro:IPR003526" FT /db_xref="InterPro:IPR020555" FT /db_xref="InterPro:IPR023423" FT /db_xref="UniProtKB/Swiss-Prot:A5HXW3" FT /protein_id="CAL81622.1" FT /translation="MRIGLGYDVHKLVENRPLIIGGVTIPHDKGLLGHSDADVLVHAIM FT DALLGAAALGDIGKHFPDSDKNFKNISSLLLLSKVKDLINKEGYKIVNIDCTIIAQKPK FT MLYHIDAMKKNICKCLKLDNNMLNIKATTEEGLGFTGKEEGISANAICLLD" FT misc_feature complement(98429..98440) FT /note="PS00294 Prenyl group binding site (CAAX box)." FT /inference="protein motif:ProSite:PS00294" FT misc_feature complement(98429..98893) FT /note="Pfam match to entry PF02542 YgbB, YgbB family,score FT 271.4, E-value 1.3e-78" FT /inference="protein motif:Pfam:PF02542" FT CDS complement(98969..99301) FT /transl_table=11 FT /locus_tag="CBO0067" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HXW4" FT /protein_id="CAL81623.1" FT /translation="MCNLWTTYIILNIILLNKNIKFEIVSIFLTFVKSYVIIIIGIFVK FT GRVYMGEKIIYVNFKKRVISNSYKRPFLLFLHNFLRKKLLFFYNKHLNKSIKLIYYKKN FT DNKNIS" FT misc_feature complement(99170..99238) FT /note="1 probable transmembrane helix predicted for CBO0067 FT by TMHMM2.0 at aa 22-44" FT /inference="protein motif:TMHMM:2.0" FT CDS 99629..100498 FT /transl_table=11 FT /locus_tag="CBO0068" FT /product="probable polysaccharide deacetylase" FT /note="Similar to Clostridium tetani putative FT polysaccharide deacetylase ctc00229 SWALL:Q899F2 FT (EMBL:AE015936) (293 aa) fasta scores: E(): 4.7e-50,52.05 FT 38d in 292 aa, and to Clostridium acetobutylicum predicted FT xylanase/chitin deacetilase, similar to yxkh b.subtilis FT cac0436 SWALL:Q97LW8 (EMBL:AE007558) (295 aa) fasta scores: FT E(): 8.6e-38, 47.03 38d in 253 aa" FT /db_xref="GOA:A5HXW5" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:A5HXW5" FT /protein_id="CAL81624.1" FT /translation="MKNKKSLIFFAFIMMIAVLFSGCKKNNNVDDNNISEKKAQSKKQE FT RNIKNTDVRSFTKEPLIYNDKSVPVLMYHSIDYEKGNELRVPKEQFKEQMEYLKDNGYT FT TLTLNELYNFLEKNKPIPEKSIVITLDDGYVDNYTNAYPILKELGFNATVFVVTSNIDK FT DKRTLTSKQIKEMDEAGIQIASHTYNHDKLDDLSYEKQLQTMKKSKDDLEKILNHKVDF FT IAYPYGKWNEESIKAAKDSGYKMAFTTQGGWSNKQDGIYTLNRVYISSLKGIDNFKDRI FT TNPNYNKS" FT sig_peptide 99629..99713 FT /locus_tag="CBO0068" FT /note="probabilty 0.997, with cleavage site probability FT 0.553 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 99665..99697 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 99983..100366 FT /note="Pfam match to entry PF01522 FT Polysacc_deacet,Polysaccharide deacetylase, score 148.1, FT E-value 1.6e-41" FT /inference="protein motif:Pfam:PF01522" FT CDS complement(100767..101009) FT /transl_table=11 FT /locus_tag="CBO0069" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum predicted FT metal-binding protein cac0438 SWALL:Q97LW6 (EMBL:AE007558) FT (80 aa) fasta scores: E(): 1.4e-16, 53.75 38d in 80 aa. No FT similarity to any other protein in the database." FT /db_xref="UniProtKB/TrEMBL:A5HXW6" FT /protein_id="CAL81625.1" FT /translation="MTLREIMKYIESEFSIINKTPCDICGGSYLTKDLSINLLDSIPYD FT ICDCVCSNCGHKKVFKFYAPFIDESKKENYSKIIN" FT CDS 101129..101704 FT /transl_table=11 FT /gene="spmA" FT /locus_tag="CBO0070" FT /product="spore maturation protein A" FT /note="Similar to Bacillus subtilis spore maturation FT protein A SpmA or bsu23180 SWALL:SPMA_BACSU (SWALL:P35157) FT (196 aa) fasta scores: E(): 6.1e-26, 40.83 38d in 191 FT aa,and to Clostridium tetani spore maturation protein A FT ctc00238 SWALL:Q899E4 (EMBL:AE015936) (197 aa) fasta FT scores: E(): 3.7e-46, 61.78 38d in 191 aa" FT /db_xref="GOA:A5HXW7" FT /db_xref="InterPro:IPR011642" FT /db_xref="UniProtKB/TrEMBL:A5HXW7" FT /protein_id="CAL81626.1" FT /translation="MVNIIWGIIFLVGVMFGVFSGNGEQLSKSIIESTNSTVKLVIGLV FT GVMSLWCGIMKIAEESGLTDKIAKCIKPILKVIFKDSKNDNKALGAITMNLTANMMGLS FT NAATPFGIKAMKELKRLNVKEEEASNDMALFLVLNAACIQLVPTTVISIRAAMGSKNPG FT EIIIPAIIVTSTAAFCGVIFCKILQKYF" FT misc_feature 101129..101701 FT /note="Pfam match to entry PF04291 Spore_mat_A, Spore FT maturation protein A, score 321.3, E-value 1.2e-93" FT /inference="protein motif:Pfam:PF04291" FT misc_feature order(101138..101197,101234..101302,101396..101464, FT 101525..101593,101621..101689) FT /note="5 probable transmembrane helices predicted for FT CBO0070 by TMHMM2.0 at aa 4-23, 36-58, 90-112, 133-155 and FT 165-187" FT /inference="protein motif:TMHMM:2.0" FT CDS 101717..102235 FT /transl_table=11 FT /gene="spmB" FT /locus_tag="CBO0071" FT /product="spore maturation protein B" FT /note="Similar to Bacillus subtilis spore maturation FT protein B SpmB or bsu23170 SWALL:SPMB_BACSU (SWALL:P35158) FT (179 aa) fasta scores: E(): 4.1e-25, 41.61 38d in 173 FT aa,and to Clostridium acetobutylicum spore maturation FT protein B cac0470 SWALL:Q97LT4 (EMBL:AE007561) (173 aa) FT fasta scores: E(): 2.7e-45, 69.59 38d in 171 aa" FT /db_xref="InterPro:IPR011642" FT /db_xref="UniProtKB/TrEMBL:A5HXW8" FT /protein_id="CAL81627.1" FT /translation="MNYIVKAIIPIIILLIIAYGMIKRVKVYECFVEGAKDGISICIKI FT FPYLLAMMVAIAVFRESKALDCLINILRPVSNLIGLPGELVPLVLIKPLSGSGALGVFA FT DILKQFGPDSNVGKMASIIMGSTETIFYTITVYFGAVGIKKIRHTLWAAIFADMVAIIM FT AVLVTNIIL" FT misc_feature order(101723..101782,101825..101893,101948..102016, FT 102074..102142,102161..102229) FT /note="5 probable transmembrane helices predicted for FT CBO0071 by TMHMM2.0 at aa 3-22, 37-59, 78-100, 120-142 and FT 149-171" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 101768..102232 FT /note="Pfam match to entry PF03751 Spore_mat_B, Spore FT maturation protein B, score 208.8, E-value 8.8e-60" FT /inference="protein motif:Pfam:PF03751" FT repeat_region complement(102378..102433) FT repeat_region 102383..102422 FT CDS complement(102480..103817) FT /transl_table=11 FT /locus_tag="CBO0072" FT /product="putative Na+ driven multidrug efflux pump" FT /note="Similar to Vibrio parahaemolyticus multidrug FT resistance protein NorM or vp1479 SWALL:NORM_VIBPA FT (SWALL:O82855) (456 aa) fasta scores: E(): 8.1e-23, 26.57 FT id in 414 aa, and to Clostridium tetani Na+ driven FT multidrug efflux pump ctc01799 SWALL:Q893L8 (EMBL:AE015942) FT (455 aa) fasta scores: E(): 6.5e-93,52.71 38d in 442 aa" FT /db_xref="GOA:A5HXW9" FT /db_xref="InterPro:IPR002528" FT /db_xref="UniProtKB/TrEMBL:A5HXW9" FT /protein_id="CAL81628.1" FT /translation="MKINRENIKTVLSLALPAVGEMILYMMIWVLDTMMVGQYGGQIAV FT STVGLSSEIIYTFTNIFIAVGLSIGITSIVARSYGSDNLHLAEEYASIGLSIGILIAFF FT ISIILFIFPKTILSLANAKEAVLINGTIYMKIISLGIFFSMLTSLMNSIVRGYGNTKTP FT LFISILINIVNLTLDYGLIFGKLGFPELGIRGAAIATSIANLSGFMFAIYYLFTKSKIK FT PKIKYIKNINISRFKYLIRLSIPSSLQEASLSVSKLINTFMIMHLGTVAFASNQIALTV FT ESISFMPGWGFAVAATTLTGHKIGEKNIEKARDYSHTCTFLGICIMGITGLIFLIFPSF FT IIKLFITNSEKQVITLGSRCLMIASLEQIPMAISMILGGSLKGFGDTKTPFLVSFISSW FT LLRLPLMFYFIYIVKSSVTYVWWITSIQWIFEAICLIILSRKKFNK" FT misc_feature complement(order(102501..102569,102579..102647, FT 102666..102734,102792..102860,103170..103238, FT 103266..103334,103371..103439,103482..103550, FT 103587..103655,103725..103784)) FT /note="10 probable transmembrane helices predicted for FT CBO0072 by TMHMM2.0 at aa 12-31, 55-77, 90-112, FT 127-149,162-184, 194-216, 320-342, 362-384, 391-413 and FT 417-439" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(102594..103085) FT /note="Pfam match to entry PF01554 MatE, MatE, score 151.7, FT E-value 1.3e-42" FT /inference="protein motif:Pfam:PF01554" FT misc_feature complement(103278..103769) FT /note="Pfam match to entry PF01554 MatE, MatE, score 119.7, FT E-value 5.9e-33" FT /inference="protein motif:Pfam:PF01554" FT CDS 103961..104533 FT /transl_table=11 FT /locus_tag="CBO0073" FT /product="putative uracil-DNA glycosylase" FT /note="Similar to Clostridium tetani DNA FT polymerase,bacteriophage-type ctc00242 SWALL:Q899E0 FT (EMBL:AE015936) (188 aa) fasta scores: E(): 1e-52, 63.97 FT 38d in 186 aa,and to Thermoanaerobacter tengcongensis FT uracil-DNA glycosylase tte0077 SWALL:Q8RDF7 (EMBL:AE012981) FT (186 aa) fasta scores: E(): 4.2e-42, 56.21 38d in 185 aa" FT /db_xref="GOA:A5HXX0" FT /db_xref="InterPro:IPR005122" FT /db_xref="InterPro:IPR005273" FT /db_xref="UniProtKB/TrEMBL:A5HXX0" FT /protein_id="CAL81629.1" FT /translation="MLKWSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPG FT ADEDRTGRPFVGKAGQLLTKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLP FT YLRNQVALVKPKIMICLGATALKYIMGEQFRITRDRGKWIERKGYYIMATFHPAALFRD FT ESKKKLLWQDLKSIREKYDELIKNNIV" FT misc_feature 104048..104497 FT /note="Pfam match to entry PF03167 UDG, Uracil DNA FT glycosylase superfamily, score 92.8, E-value 7.1e-25" FT /inference="protein motif:Pfam:PF03167" FT CDS 104562..104996 FT /transl_table=11 FT /locus_tag="CBO0074" FT /product="MarR-family transcriptional regulator" FT /note="Similar to Bacillus subtilis organic hydroperoxide FT resistance transcriptional regulator OhrR or bsu13150 FT SWALL:OHRR_BACSU (SWALL:O34777) (147 aa) fasta scores: E(): FT 0.00012, 27.27 38d in 143 aa, and to Staphylococcus aureus FT hypothetical protein sav2386 or sa2174 SWALL:Q99RP3 FT (EMBL:AP003365) (148 aa) fasta scores: E(): 1.4e-05,28.87 FT 38d in 142 aa" FT /db_xref="GOA:A5HXX1" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HXX1" FT /protein_id="CAL81630.1" FT /translation="MDNMELSKELIKFIITMKKQIKKYLNLNSTLKLTEQQFVTLFILK FT KNKKITLKKLSTYICVSTSSLCIMLTRMMEEELVYREVDERDRRNTFYSLTEKGVNLID FT KEIEGKVDNIEEKIMNLSLSQKEKLYEAIKNIEEIIDILE" FT misc_feature 104658..104969 FT /note="Pfam match to entry PF01047 MarR, MarR family,score FT 65.4, E-value 1.3e-16" FT /inference="protein motif:Pfam:PF01047" FT misc_feature 104709..104774 FT /note="Predicted helix-turn-helix motif with score FT 1182.000, SD 3.21 at aa 50-71, sequence FT ITLKKLSTYICVSTSSLCIMLT" FT CDS 105378..107315 FT /transl_table=11 FT /gene="metG" FT /gene_synonym="metS" FT /locus_tag="CBO0075" FT /product="methionyl-tRNA synthetase" FT /EC_number="6.1.1.10" FT /note="Similar to Bacillus stearothermophilus FT methionyl-tRNA synthetase MetG or MetS SWALL:SYM_BACST FT (SWALL:P23920) (649 aa) fasta scores: E(): 3.3e-151,61.13 FT 38d in 651 aa, and to Clostridium acetobutylicum FT methionyl-tRNA synthetase MetG or cac2991 SWALL:SYM_CLOAB FT (SWALL:Q97EW5) (644 aa) fasta scores: E(): 8.3e-193,76.67 FT 38d in 643 aa" FT /db_xref="GOA:A5HXX2" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002547" FT /db_xref="InterPro:IPR004495" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR014758" FT /db_xref="InterPro:IPR015413" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR023457" FT /db_xref="UniProtKB/TrEMBL:A5HXX2" FT /protein_id="CAL81631.1" FT /translation="MSKGTYYVTTPIYYPSAKLHIGNTYTTVAADTLARFKRLTGYDVM FT FLTGTDEHGQKIQRLAEAKKVTPKVYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVEL FT VQKIFKTLYDKGDIYKSEYSGWYCTPCESFWTETQLEDGKCPDCGRSVEKAKEEAYFFK FT MSKYAPKLIEYIESHPEFIQPESRKNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKH FT VIYVWIDALANYITALGYSTEKDELYKKYWPADVHLVGKDILRFHTIYWPIMLMALDIP FT LPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNE FT IFIKKINSDLANDLGNLLSRTVAMIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEE FT NMEKLRIPEALEEIWTFIGRANKYIDETTPWILAKDESKKERLGTVLYNLAESLRIISV FT CISAFIPETSIKINEQINADVLNWDSLSKFNGTKVGTKVKKGEAIFPRIDVEKKIEELN FT KLKEEQLKQNKAKNIAPIKEEITIDDFEKIDLRVAKVLECEPIKGAKKLLKLKVSLGGE FT ERQVVSGIAKYYKPEDLIGKKVVLVANLKPVKLRGELSQGMILAASTEDDSELFVASID FT GDIEEGNIVR" FT misc_feature 105384..106388 FT /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA FT synthetases class I (I, L, M and V), score -113.3, E-value FT 7.3e-10" FT /inference="protein motif:Pfam:PF00133" FT misc_feature 105420..105449 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature 107022..107306 FT /note="Pfam match to entry PF01588 tRNA_bind, Putative tRNA FT binding domain, score 160.3, E-value 3.5e-45" FT /inference="protein motif:Pfam:PF01588" FT CDS 107480..108985 FT /transl_table=11 FT /locus_tag="CBO0076" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe2521 SWALL:Q8XHG4 (EMBL:AP003194) (499 aa) fasta FT scores: E(): 1.5e-43, 34.32 38d in 507 aa, and to Listeria FT monocytogenes hypothetical protein Lmo2224 SWALL:Q8Y552 FT (EMBL:AL591982) (377 aa) fasta scores: E(): 1.6e-08, 23.49 FT 38d in 498 aa" FT /db_xref="InterPro:IPR007383" FT /db_xref="UniProtKB/TrEMBL:A5HXX3" FT /protein_id="CAL81632.1" FT /translation="MKFLIASIIGGIIGYLTNWIAIKMLFRPYEEKRIFGMKVPFTPGL FT IPKEKTRIAKSVGNAIGEHLLSSEIIVKSLCSENMNNRLKIWIRQKVYSLITTKKTLED FT KFKEFLDYKYDYFINALKASLSKLTINNLKNEKNRDKVKQIIKIKLDKILSLKGNHITN FT NYIYKQIKRGLINNTNEYLKSNNFKEVLKSLIIENIKDEEVLNKKIGNIIPNNFTSNIK FT VYVYRKKDNLSNYINEMLKEEGNINKLKNILREVINNNVNSFMSMFIDVNAISDKTIVF FT LEGYLQREETKEEMVSLVNKSIDKILDTDLQDIIENIPENNKDVILNETVDILCQKFQN FT TEMILEMIEKIESHFQGKNSLNDIIEKININPYKFINSIIDKFIDSENFEAIINNLISD FT IIENFMKTPIYELTQGNEEGILNTSYQTVKNVYNRFIENQAEEVISILDISSIVEDRIN FT EFDVYLAEEIILEISSKELKAITWLGGLLGALIGILSPILSKI" FT misc_feature order(107486..107545,108914..108973) FT /note="2 probable transmembrane helices predicted for FT CBO0076 by TMHMM2.0 at aa 3-22 and 479-498" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 107501..108982 FT /note="Pfam match to entry PF04286 DUF445, Protein of FT unknown function (DUF445), score 82.7, E-value 7.7e-22" FT /inference="protein motif:Pfam:PF04286" FT CDS 109136..109930 FT /transl_table=11 FT /locus_tag="CBO0077" FT /product="putative TatD-family hydrolase" FT /note="Similar to Clostridium acetobutylicum php FT superfamily hydrolase, yabd ortholog cac2989 SWALL:Q97EW7 FT (EMBL:AE007795) (253 aa) fasta scores: E(): 1e-64, 68.65 id FT in 252 aa, and to Clostridium perfringens hypothetical FT protein Cpe2520 SWALL:Q8XHG5 (EMBL:AP003194) (256 aa) fasta FT scores: E(): 1e-61, 63.92 38d in 255 aa" FT /db_xref="GOA:A5HXX4" FT /db_xref="InterPro:IPR001130" FT /db_xref="InterPro:IPR012278" FT /db_xref="InterPro:IPR015991" FT /db_xref="InterPro:IPR018228" FT /db_xref="UniProtKB/TrEMBL:A5HXX4" FT /protein_id="CAL81633.1" FT /translation="MKKYRIFDAHAHYDDEAFDEDRSEVIKELEDFGILGVLNCGSSLD FT TSKTSVELSNKYNFFYAAVGVHPENAEEINEKTLNKIEALSENKKVKAIGEIGLDYYYE FT ENPKRDIQIKAFKKQMELAEKLNLPVVIHDRDAHKDTLDIIKQFPNIKGEVHCFSGSVE FT FAKQCVDLGYYIGVTGVVTFKNAKKIVEVIKSVPMDRILVETDCPYMAPTPLRGKRNRS FT EYIKYMVDKIAEIKEISSEEVTSQILINIKDLFNIDVIKNKD" FT misc_feature 109145..109906 FT /note="Pfam match to entry PF01026 TatD_DNase, TatD related FT DNase, score 389.4, E-value 3.7e-114" FT /inference="protein motif:Pfam:PF01026" FT CDS 109957..110100 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0078" FT /product="putative enterocin immunity protein (partial)" FT /note="Similar to an internal region of Enterococcus FT faecalis Enti1071 enti1071 SWALL:Q8GFE1 (EMBL:AF164559) FT (125 aa) fasta scores: E(): 0.22, 40.42 38d in 47 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL81634.1" FT misc_feature 110008..110076 FT /note="1 probable transmembrane helix predicted for CBO0078 FT by TMHMM2.0 at aa 18-40" FT /inference="protein motif:TMHMM:2.0" FT CDS 110158..111216 FT /transl_table=11 FT /locus_tag="CBO0079" FT /product="putative exported protein" FT /note="Similar to Clostridium tetani hypothetical membrane FT associated protein ctc00245 SWALL:Q899D7 (EMBL:AE015936) FT (368 aa) fasta scores: E(): 2.6e-61, 54.98 38d in 351 aa" FT /db_xref="GOA:A5HXX6" FT /db_xref="InterPro:IPR007137" FT /db_xref="InterPro:IPR010611" FT /db_xref="InterPro:IPR011098" FT /db_xref="InterPro:IPR014733" FT /db_xref="UniProtKB/TrEMBL:A5HXX6" FT /protein_id="CAL81635.1" FT /translation="MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSI FT DGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQLDAEIKDGSKLSIKKAVKVNVEVD FT GKKLAIQSAENNIGDMLKKEGIQVKKLDKVAPSKEEEIKKGLKVTVTRVEEKVIKSKKN FT MDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSK FT VVAMGTKVTTVNALSRGGSVTGTPGGRLLRMRATAYTSSYEDTGKSPGSPDFGVTATGT FT TARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTGGAIKGNVIDLYFDSNVEVSN FT WGSRWVNVYILD" FT sig_peptide 110158..110269 FT /locus_tag="CBO0079" FT /note="probabilty 0.857, with cleavage site probability FT 0.329 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature 110194..110262 FT /note="1 probable transmembrane helix predicted for CBO0079 FT by TMHMM2.0 at aa 12-34" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 110206..110253 FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT /inference="protein motif:ProSite:PS00038" FT misc_feature 110236..110406 FT /note="Pfam match to entry PF03990 DUF348, Domain of FT unknown function (DUF348), score 35.7, E-value 1.1e-07" FT /inference="protein motif:Pfam:PF03990" FT misc_feature 110410..110577 FT /note="Pfam match to entry PF03990 DUF348, Domain of FT unknown function (DUF348), score 46.3, E-value 7e-11" FT /inference="protein motif:Pfam:PF03990" FT CDS 111289..111834 FT /transl_table=11 FT /locus_tag="CBO0080" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum primase-like FT protein, containing toprim domain, yabf b.subtilis ortholog FT cac2987 SWALL:Q97EW9 (EMBL:AE007795) (185 aa) fasta scores: FT E(): 7.2e-43, 71.34 38d in 178 aa" FT /db_xref="InterPro:IPR004466" FT /db_xref="InterPro:IPR006171" FT /db_xref="UniProtKB/TrEMBL:A5HXX7" FT /protein_id="CAL81636.1" FT /translation="MIKEVIVVEGRDDITAVKRAVDAEMIAVGGFGINSKVIKKIREAQ FT KRQGVIVLTDPDYAGEKIRKYICNRVKGVKHAYISQEEGTKEDDIGVENAAPEAIIRAL FT NLAKCEVKQERKEFDMNDMIFFKLTANEESKERREKLGMALGIGYCNTNQFIKRLNNFG FT ITKEEFIKAIKDLDKGNE" FT misc_feature 111295..111528 FT /note="Pfam match to entry PF01751 Toprim, Toprim FT domain,score 43.2, E-value 6.2e-10" FT /inference="protein motif:Pfam:PF01751" FT CDS 111827..112663 FT /transl_table=11 FT /gene="ksgA" FT /gene_synonym="rsmA" FT /locus_tag="CBO0081" FT /product="dimethyladenosine transferase" FT /EC_number="2.1.1.-" FT /note="Similar to Escherichia coli dimethyladenosine FT transferase KsgA or RsmA or b0051 SWALL:KSGA_ECOLI FT (SWALL:P06992) (273 aa) fasta scores: E(): 5.9e-25, 36.32 FT id in 256 aa, and to Clostridium acetobutylicum FT dimethyladenosine transferase KsgA or cac2986 FT SWALL:KSGA_CLOAB (SWALL:Q97EX0) (276 aa) fasta scores: E(): FT 6.7e-69, 67.63 38d in 275 aa" FT /db_xref="GOA:A5HXX8" FT /db_xref="InterPro:IPR001737" FT /db_xref="InterPro:IPR011530" FT /db_xref="InterPro:IPR020596" FT /db_xref="InterPro:IPR020598" FT /db_xref="InterPro:IPR023165" FT /db_xref="UniProtKB/TrEMBL:A5HXX8" FT /protein_id="CAL81637.1" FT /translation="MNNMNTKEIVNKYEFKFNKNLGQNFLIDESVLEDIIEGAEINKED FT TVIEIGPGVGTLTKELLERAKEVYSIELDGDLIPILQEELKEYNNFTLIHKDALKIDFN FT ELMENKDSIKLVANLPYYVTTPIISRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYG FT SLTVLVQYYCNTKIIRKVSPNSFIPRPKVDSIVIKLDRLSEPRVRVKSQKLFFNVVRSS FT FNMRRKTLWNSLKSLNIDKESMENAFERAGIDPKRRGETLSIEEFGKLSDCIYDIL" FT misc_feature 111893..112642 FT /note="Pfam match to entry PF00398 RrnaAD, Ribosomal RNA FT adenine dimethylase, score 281.6, E-value 1e-81" FT /inference="protein motif:Pfam:PF00398" FT misc_feature 111965..112048 FT /note="PS01131 Ribosomal RNA adenine dimethylases FT signature." FT /inference="protein motif:ProSite:PS01131" FT CDS 112742..113983 FT /transl_table=11 FT /locus_tag="CBO0082" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00249 SWALL:Q899D4 (EMBL:AE015936) (438 aa) fasta FT scores: E(): 3.8e-27, 45.7 38d in 431 aa, and to FT Clostridium acetobutylicum hypothetical protein Cac2985 FT SWALL:Q97EX1 (EMBL:AE007795) (491 aa) fasta scores: E(): FT 5.8e-27, 40.65 38d in 487 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXX9" FT /protein_id="CAL81638.1" FT /translation="MAQKKNYSRYFIILEEDEKGYSLGVDKSASGYVKLENKNGKCKIS FT YYVQNIKKQSSPYHMVLICNKKGTKDIIKIGEMNIDEYGRADICYEYPVDNIGNSEINA FT DKISGAAIVKFIDSNIISVMSGFSTTDIPTWKSFSIIESKEIKKEEIKEEKVNKTIFDK FT YEESIEEIKIKDSNSANKDNKVKSVQENKEQEHKEKNLDNKNKEKGENIEKPNEKPNEK FT ANEKPNEKPNEKANEKPNEKPNEKANEKPNEKNLGKTKKSIEENEDKKRNKQNIPIGLE FT GKYFRSLVEDLDSIDNITDEIKNCIWYKIDAKDEDDMRNTCNYDKFMVLYNPMLGYYPY FT IKKHGHYILGYKCDISGNMKYLVYGIPGNKTREEQPFKGKSGFVTWIENKENNLGYWLM FT FYDYKTNNILIPVK" FT CDS 114140..114727 FT /transl_table=11 FT /locus_tag="CBO0083" FT /product="putative exported protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein Cac2984 SWALL:Q97EX2 (EMBL:AE007795) (221 aa) fasta FT scores: E(): 6.8e-24, 36.92 38d in 195 aa, and to FT Clostridium tetani conserved membrane-associated protein FT ctc00250 SWALL:Q899D3 (EMBL:AE015936) (196 aa) fasta FT scores: E(): 6.2e-19, 34.02 38d in 194 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXY0" FT /protein_id="CAL81639.1" FT /translation="MKVLIINKKRFGVTMIIIGLMLILFGLEKNFDNRLKIAALIHNNV FT SSFKEYNILNGKISYKLPSNWEINEEIINGEDIIYSNSFIDKKNNMKGFIQLWNYKGDL FT KAFIKHSKEVSDKQQVDYTKYNVVPVDLNNMKGYLAQYSILKENKEYVAYEYFFKVEEG FT FIRVSFFVPEKYYQESIETVFNTILKNIVYKH" FT sig_peptide 114140..114227 FT /locus_tag="CBO0083" FT /note="probabilty 0.829, with cleavage site probability FT 0.329 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 114167..114220 FT /note="1 probable transmembrane helix predicted for CBO0083 FT by TMHMM2.0 at aa 13-30" FT /inference="protein motif:TMHMM:2.0" FT CDS 114896..115729 FT /transl_table=11 FT /locus_tag="CBO0084" FT /product="putative lipoprotein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00252 SWALL:Q899D1 (EMBL:AE015936) (279 aa) fasta FT scores: E(): 2e-49, 52.51 38d in 278 aa, and to Clostridium FT acetobutylicum hypothetical protein Cac2983 cac2983 FT SWALL:Q97EX3 (EMBL:AE007795) (284 aa) fasta scores: E(): FT 1.4e-40, 45.93 38d in 283 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXY1" FT /protein_id="CAL81640.1" FT /translation="MLYNKKKLVLLFVIFALSFSVTGCNSIDKMKLKLGLKNNDFEYIK FT ENKVQKIIIQNTRDKGFRFVITDKKAIKELYDILSSAKPVNTKSSLEPDYIFEMDEAGN FT KAYKFSYIAGLDKKEAGNLYSGDKIYIVSKRIDNDIIKSFWTIRKPKDFKYVYYNSIIE FT VLKKENINKNNKDKVGINIKDDVDVAKFILSTDLEDFKTDLKNNFSNVELIKDNNANHN FT IEVSVDTEGYKSTMYKAVIKINNKNKRTEKKYYIVDEYKNNRWNINIYNEKPENF" FT sig_peptide 114896..114968 FT /locus_tag="CBO0084" FT /note="probabilty 0.958, with cleavage site probability FT 0.533 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 114914..114967 FT /note="1 probable transmembrane helix predicted for CBO0084 FT by TMHMM2.0 at aa 7-24" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 114935..114967 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 115897..116958 FT /transl_table=11 FT /locus_tag="CBO0085" FT /product="putative exported protein" FT /note="Similar to Thermoanaerobacter tengcongensis FT membrane-fusion protein acra2 or tte1200 SWALL:Q8RAL3 FT (EMBL:AE013082) (390 aa) fasta scores: E(): 1.4e-23,37.98 FT 38d in 387 aa, and to Clostridium tetani conserved FT membrane-associated protein ctc00484 SWALL:Q898G8 FT (EMBL:AE015937) (437 aa) fasta scores: E(): 9e-15, 25.87 id FT in 429 aa" FT /db_xref="GOA:A5HXY2" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:A5HXY2" FT /protein_id="CAL81641.1" FT /translation="MKKKTIIITGVVLLIGLFVILGIFKSKKNSNISVKTIKVTKGNVE FT SYLSTTGNVVSKNKKEYFGGQAKVKKVNVKVGDKVKKGQSLLNFDMSELENDRQVAQME FT YDNAISQKKALKSQKNSEQNKMNSITNSQIEQVENAVRLAELKLESVNYKINESEETVA FT DIDGIVTEVNAQAGGISTGQGQPLVVVENVDDLKVAVSLGKYDSTKVKKGMKAFVKNDD FT KKYEAKVDFIAPTAKKTVKEAGGGNDTTLDCEIYLSKNNTKDLRIGFDVDVDILLGESK FT NVLKIPLESIKTDKYNKSHVYVVEEGKVKEKPVQLGTQSDMEAEIISGLKSGEKVILNP FT NASIKTGVSVQEK" FT sig_peptide 115897..115972 FT /locus_tag="CBO0085" FT /note="probabilty 0.998, with cleavage site probability FT 0.509 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature 115915..115968 FT /note="1 probable transmembrane helix predicted for CBO0085 FT by TMHMM2.0 at aa 7-24" FT /inference="protein motif:TMHMM:2.0" FT CDS 116969..117664 FT /transl_table=11 FT /locus_tag="CBO0086" FT /product="ABC transporter ATP-binding protein" FT /note="Similar to Clostridium tetani ABC transporter FT ATP-binding protein ctc00485 SWALL:Q898G7 (EMBL:AE015937) FT (238 aa) fasta scores: E(): 1.8e-49, 64.31 38d in 227 FT aa,and to Thermoanaerobacter tengcongensis ABC-type FT transport systems, involved in lipoprotein release, ATPase FT components phnl2 or tte1199 SWALL:Q8RAL4 (EMBL:AE013082) FT (231 aa) fasta scores: E(): 9e-49, 62.55 38d in 227 aa" FT /db_xref="GOA:A5HXY3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HXY3" FT /protein_id="CAL81642.1" FT /translation="MLIVKDIEKTYNTGEISFKALKGISLKIERGEFTSIMGPSGSGKS FT TFMNILGCLDKMDKGEYILNGKDVTDLTENDLAYVRNKEIGFVFQAFNLLPRMTILDNV FT ELPMVYAGVPLKERKERALSALERVGLIERINHRPNEISGGQKQRVAIARAIVNNPSVI FT MADEPTGNLDTKSSLDIMRIFQNLNEEGSTIIMVTHEPDIAKYTKRVVKFRDGHIVSDE FT KVLNREIVE" FT misc_feature 117059..117616 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 197.5, E-value 2.2e-56" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 117080..117103 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 117335..117364 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT misc_feature 117392..117436 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 117661..118869 FT /transl_table=11 FT /locus_tag="CBO0087" FT /product="ABC transporter permease protein" FT /note="Similar to Clostridium tetani ABC transporter FT permease protein ctc00486 SWALL:Q898G6 (EMBL:AE015937) (404 FT aa) fasta scores: E(): 1e-60, 47.66 38d in 407 aa,and to FT Thermoanaerobacter tengcongensis ABC-type transport FT systems, involved in lipoprotein release, permease FT components tte1198 SWALL:Q8RAL5 (EMBL:AE013082) (405 aa) FT fasta scores: E(): 4.1e-65, 50.73 38d in 406 aa" FT /db_xref="GOA:A5HXY4" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5HXY4" FT /protein_id="CAL81643.1" FT /translation="MKFLENLKMALDSIKSNKMRSFLTMLGIIIGISSVITIVSLGKGG FT QNTITGEFEKIGSATVSIKVDGSKASSNDYIKQEDVDIIKNKIEKVKYVAPIVSRPGSV FT TEGTKNKKLYIDGSTPDVQYVTNAEMVYGRFFNEGEHVEGKPVVIIDERSARNIFGTED FT VVGRKLKISAKTSSKQVTVIGVSKSESGPFSGGGEDSPIFLTCPINFLKDLYPEDFIID FT SLYIIATDKNDTEEVGVMAKNILENRHHNKGKDMYKVENMLKQLDEVNKVIGIFTTFIG FT AVAAISLLVGGIGVMNIMLVSVTERTREIGIRKALGATTKNILIQFLTESVIISLIGGL FT IGMILGIVFAEIIGKFIKISPSVSIAAILIAILFSSSVGIFFGIYPAKKAAKLNPIDAL FT RYE" FT sig_peptide 117661..117784 FT /locus_tag="CBO0087" FT /note="probabilty 0.948, with cleavage site probability FT 0.345 between residues 42 and 43" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(117721..117780,118474..118542,118651..118719, FT 118747..118815) FT /note="4 probable transmembrane helices predicted for FT CBO0087 by TMHMM2.0 at aa 21-40, 272-294, 331-353 and FT 363-385" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 118477..118845 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 150.1, E-value 4.1e-42" FT /inference="protein motif:Pfam:PF02687" FT CDS 118951..119793 FT /transl_table=11 FT /locus_tag="CBO0088" FT /product="putative ATP-binding protein" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT Mrp protein or b2113 or c2641 SWALL:MRP_ECOLI FT (SWALL:P21590) (369 aa) fasta scores: E(): 6.7e-31, 42.33 FT id in 248 aa, and to Clostridium tetani Mrp protein FT ctc00253 SWALL:Q899D0 (EMBL:AE015936) (280 aa) fasta FT scores: E(): 8.9e-72, 73.4 38d in 282 aa" FT /db_xref="GOA:A5HXY5" FT /db_xref="InterPro:IPR000808" FT /db_xref="InterPro:IPR005129" FT /db_xref="InterPro:IPR019591" FT /db_xref="UniProtKB/TrEMBL:A5HXY5" FT /protein_id="CAL81644.1" FT /translation="MSNCDSCASKGTCNSEGSCSKETFKYGNAKNIIGVISGKGGVGKS FT TITGILATKLREEGYKVGVLDGDITGPSMPRFFGISDKRATIIPTGENEEVKIIPVETK FT TGIKVMSLNLLTEQEEAPVIWRGPVITGVLTQMYTDTEWGELDYLLIDMPPGTGDIALT FT VMQSLPVTNMVVVSTPQDMVSMIVKKVVIMIEKMGIEVLGVVENMSYIKCGSCGEKLNV FT FSKKSAEEQAEYLNIPLIADMPINLDLSEEMEKGEVETFIINNEEYAQLYNNFKNLYK" FT misc_feature 119062..119085 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 119377..119427 FT /note="PS01215 Mrp family signature." FT /inference="protein motif:ProSite:PS01215" FT CDS 119933..120124 FT /transl_table=11 FT /locus_tag="CBO0089" FT /product="ferredoxin" FT /note="Similar to Thermotoga maritima ferredoxin Fdx or FT tm0927 SWALL:FER_THEMA (SWALL:P46797) (60 aa) fasta scores: FT E(): 0.00016, 38.98 38d in 59 aa, and to Clostridium FT perfringens ferredoxin Fer or cpe2511 SWALL:Q8XHH3 FT (EMBL:AP003194) (62 aa) fasta scores: E(): 3.4e-07, 45.76 FT 38d in 59 aa" FT /db_xref="GOA:A5HXY6" FT /db_xref="InterPro:IPR001080" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="UniProtKB/TrEMBL:A5HXY6" FT /protein_id="CAL81645.1" FT /translation="MKIEIDKDKCIGCGLCEEIGDGLFKVGDEDKAELTIDPIPIMKEQ FT YGKEAEYVCPVNAIRTII" FT misc_feature 119939..120004 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 11.5, E-value 0.0039" FT /inference="protein motif:Pfam:PF00037" FT CDS 120139..120333 FT /transl_table=11 FT /locus_tag="CBO0090" FT /product="putative membrane protein" FT /note="Similar to Borrelia turicatae repeat motif protein FT BdrA6- SWALL:Q9RGH2 (EMBL:AF128449) (62 aa) fasta scores: FT E(): 2.8, 36.36 38d in 55 aa, and to Plasmodium yoelii FT yoelii hypothetical protein py07231 SWALL:EAA19615 FT (EMBL:AABL01002604) (76 aa) fasta scores: E(): 2.7, 31.25 FT id in 48 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXY7" FT /protein_id="CAL81646.1" FT /translation="MLLNKINIFDRFTKFVIFGIMNVVINLCMILVKFLQNLSFIKIYK FT ILQESIVMSFPYITIDIAF" FT misc_feature 120181..120243 FT /note="1 probable transmembrane helix predicted for CBO0090 FT by TMHMM2.0 at aa 15-35" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(120570..120746) FT /transl_table=11 FT /locus_tag="CBO0091" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HXY8" FT /protein_id="CAL81647.1" FT /translation="MLGEIIDINENNIIVKFSNGLSLAVAIEDLHDNAKIGDKININPC FT TEQTPYNKIINFF" FT CDS 120824..121894 FT /transl_table=11 FT /locus_tag="CBO0092" FT /product="putative signaling protein" FT /note="Similar to Clostridium tetani signaling protein FT ctc01837 SWALL:Q893I5 (EMBL:AE015942) (449 aa) fasta FT scores: E(): 1.8e-10, 26.93 38d in 427 aa, and to FT Shewanella oneidensis cyclic nucleotide FT phosphodiesterase,putative so3556 SWALL:Q8EBG2 FT (EMBL:AE015792) (420 aa) fasta scores: E(): 3.6e-15, 24.37 FT 38d in 357 aa" FT /db_xref="GOA:A5HXY9" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="UniProtKB/TrEMBL:A5HXY9" FT /protein_id="CAL81648.1" FT /translation="MLYVLIITLFLIMIVYESIIIINLRKNIKKLEYSKRMIYNMTKNV FT NKEKTIDNVYEIMLKTAINLIPKATQGSILTMDKEENFNYVAILGYDNKLKNIKLNKKE FT VYLYKINRFKETAIIENPIKLDEKILNKEKINEFKELEALNISCIISAPIYIDNKLFGQ FT INIDCTKENYKFKKEDLELMDHIKDELQLIIKSFMVKEELIHKANYDELTKIFNRRYFN FT EIMKNEIKEGNKILVLIDIDNFKTINDIYGHSTGDFILRVFANLIKRYLGDKDLFFRFG FT GDEFIVLFDDLDDKSVISFMENIRQKINKDKIKGINIDFSYGISKLKNYNMTNYEDIIN FT LADKNMYINKNKKIIV" FT misc_feature 120827..120895 FT /note="1 probable transmembrane helix predicted for CBO0092 FT by TMHMM2.0 at aa 2-24" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 121430..121882 FT /note="Pfam match to entry PF00990 GGDEF, GGDEF FT domain,score 141.5, E-value 1.6e-39" FT /inference="protein motif:Pfam:PF00990" FT CDS 121951..122679 FT /transl_table=11 FT /locus_tag="CBO0093" FT /product="putative cations transporter" FT /note="Similar to Bacillus subtilis SapB protein or FT bsu06650 SWALL:SAPB_BACSU (SWALL:Q45514) (232 aa) fasta FT scores: E(): 7.7e-13, 28.15 38d in 206 aa, and to FT Clostridium perfringens probable Mg2+ transport protein FT cpe0592 SWALL:Q8XMU6 (EMBL:AP003187) (241 aa) fasta scores: FT E(): 1.2e-27, 39.24 38d in 237 aa" FT /db_xref="GOA:A5HXZ0" FT /db_xref="InterPro:IPR003416" FT /db_xref="UniProtKB/TrEMBL:A5HXZ0" FT /protein_id="CAL81649.1" FT /translation="MDRKQVVFRIFLSIVIGGAIGFERERKNRPAGFRTHILVCIGSCI FT AVMIQLYIIQYMKEMIQMDGDFKYLLSADISRMASQVITGVGFLGAGTIIRDKGAVKGL FT TTAASIWVVACIGISVGLGFYFLSLVGFLGLIVSLIVFENIESSVIDKNKEYNINIEYL FT PKNNVIEYIIDELLKNEITIKSIRIFDKNINENRTIKIKLTISTNNRLNFLSVIQNLQS FT NKNIHDIDILKINKIKNRIL" FT misc_feature order(121963..122016,122053..122121,122179..122235, FT 122272..122340) FT /note="4 probable transmembrane helices predicted for FT CBO0093 by TMHMM2.0 at aa 5-22, 35-57, 77-95 and 108-130" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 121978..122403 FT /note="Pfam match to entry PF02308 MgtC, MgtC family,score FT 130.5, E-value 3.2e-36" FT /inference="protein motif:Pfam:PF02308" FT misc_feature 122263..122295 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 122969..125110 FT /transl_table=11 FT /gene="nrdD" FT /locus_tag="CBO0094" FT /product="anaerobic ribonucleoside-triphosphate reductase" FT /EC_number="1.17.4.2" FT /note="Similar to Escherichia coli anaerobic FT ribonucleoside-triphosphate reductase NrdD or b4238 FT SWALL:NRDD_ECOLI (SWALL:P28903) (712 aa) fasta scores: E(): FT 3.3e-50, 32.23 38d in 726 aa, and to Clostridium FT acetobutylicum oxygen-sensitive ribonucleoside-triphosphate FT reductase NrdD cac0480 SWALL:Q97LS4 (EMBL:AE007562) (702 FT aa) fasta scores: E(): 1.2e-139, 74.07 38d in 706 aa" FT /db_xref="GOA:A5HXZ1" FT /db_xref="InterPro:IPR005144" FT /db_xref="InterPro:IPR012833" FT /db_xref="UniProtKB/TrEMBL:A5HXZ1" FT /protein_id="CAL81650.1" FT /translation="MLYVVKRDGRKVEFDVVKISNAIKGAAEEIAFDMKESENISLTQK FT VIKKIEDSNKEEISVEDIQNLVEHVLIDSGFKEIGYAYSNYRRERTKIREIKSELMTAI FT EKIGVETDRDNANVGNNFSSKLLRIASESNKWYNLGVMPKHLAKLHENGDIYYHDLDSY FT NLTVNCLNIDTGRILQRGFNTGYGTINAPKRIESAAELSCILLQSTQNDMFGGQAHVNF FT DNDMALFIPNTRSEIRKEILENLKGLEVQEEVLNKEKIDELVEERLRLRIHQAMQGIVY FT NLNTMHSRAGSQVPFSSINIGIPKDKDAALICEIFLKEYEKGLGKGEQPIFPNIIFRVK FT EGVNREEKDPYYYLFKLAAKIAGKRMNPTFMNMDSDFNKEYYDKGIIPATMGCRTYVCS FT NISGEEGPAGRGNIAPTTINLPRVGILAKKDINKFFNLLDNRLELARESLLHRYNVLKK FT LRVKDLPFVVGEGLMKGSENLLPDDSIEPILKQGSWAIGFIGIAETLTALIGSHHGETE FT EAKELGVKIVSHIRDFCDKYKEIDKLNWSCYATPAEGLSGKFILQDKKVFGEIKGVTDK FT NYYTNSYHIPVGFPISIKEKINIEAPYHKICNGGHISYIELDDYPSEEVIMDIIQYAYR FT NTNISYMGINFHIKYCRECGTYLGVEEEACNNCGSTNIQGISRVTGYLSLDERFGSGKV FT AERADRTSNNSSHRKIYNA" FT misc_feature 122972..123250 FT /note="Pfam match to entry PF03477 ATP-cone, ATP cone FT domain, score 79.2, E-value 8.6e-21" FT /inference="protein motif:Pfam:PF03477" FT CDS 125127..125642 FT /transl_table=11 FT /gene="nrdG" FT /locus_tag="CBO0095" FT /product="anaerobic ribonucleoside-triphosphate reductase FT activating protein" FT /EC_number="1.97.1.4" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 anaerobic ribonucleoside-triphosphate reductase FT activating protein NrdG or b4237 or z5847 or ecs5214 FT SWALL:NRDG_ECOLI (SWALL:P39329) (154 aa) fasta scores: E(): FT 1.3e-09, 34.24 38d in 146 aa, and to Clostridium tetani FT anaerobic ribonucleoside-triphosphate reductase activating FT protein ctc00258 SWALL:Q899C6 (EMBL:AE015936) (169 aa) FT fasta scores: E(): 2.1e-34, 61.58 38d in 164 aa" FT /db_xref="GOA:A5HXZ2" FT /db_xref="InterPro:IPR001989" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR012837" FT /db_xref="UniProtKB/TrEMBL:A5HXZ2" FT /protein_id="CAL81651.1" FT /translation="MENKYLQVAGFLDNSLVNGLGLRSVVFVSGCKHNCKECQNKEMQS FT FCYGDKISLKDILKRIESNVPLIRGVTFSGGEPLEHIKELSSLAEEIKSLGLNIWCYTG FT YTFEYIKKEINKNHDLKKLIESIDVLVDGKYDKSKKDSSLKYKGSSNQRIIDVNKSLDR FT DEIVILDL" FT misc_feature 125181..125246 FT /note="PS01087 Radical activating enzymes signature." FT /inference="protein motif:ProSite:PS01087" FT misc_feature 125199..125609 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 8.3, E-value 0.063" FT /inference="protein motif:Pfam:PF04055" FT CDS complement(126179..126853) FT /transl_table=11 FT /locus_tag="CBO0096" FT /product="putative membrane protein" FT /note="Similar to Clostridium acetobutylicum membrane FT protein cap0154 SWALL:Q97TF0 (EMBL:AE001438) (225 aa) fasta FT scores: E(): 3.1e-26, 39.64 38d in 222 aa, and to Bacillus FT cereus hypothetical protein bc4207 SWALL:Q818P2 FT (EMBL:AE017011) (226 aa) fasta scores: E(): 4.2e-06,24.31 FT 38d in 218 aa" FT /db_xref="GOA:A5HXZ3" FT /db_xref="InterPro:IPR002004" FT /db_xref="InterPro:IPR008316" FT /db_xref="UniProtKB/TrEMBL:A5HXZ3" FT /protein_id="CAL81652.1" FT /translation="MNNIKELVKSTNELSKSLNDANDETFTNITCYLRTSSLSESQCEE FT SIHEILAMFLTAENNNESIENIIGNDSQKFCDEIIESYATKKFSKENVIVNLKIILSCF FT FILWSINIVFDYIPNMIKSKSLLLNYNFSLPFIINTVLITFLSFAVFNYMGKTAFKEES FT NKIFVIKFMLLYIIFIIISVFMWKKLSKIILFTTKIHYVLIFIAISYLILFLLSQYTYK FT QK" FT misc_feature complement(order(126191..126259,126296..126355, FT 126392..126460,126503..126571)) FT /note="4 probable transmembrane helices predicted for FT CBO0096 by TMHMM2.0 at aa 95-117, 132-154, 167-186 and FT 199-221" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(126855..127193) FT /transl_table=11 FT /locus_tag="CBO0097" FT /product="PadR-family transcriptional regulator" FT /note="Similar to Clostridium acetobutylicum predicted FT transcriptional regulator cap0153 SWALL:Q97TF1 FT (EMBL:AE001438) (115 aa) fasta scores: E(): 2.3e-29,73.45 FT 38d in 113 aa, and to Clostridium tetani putative FT transcriptional regulator PadR or ctc00601 SWALL:Q897X0 FT (EMBL:AE015938) (106 aa) fasta scores: E(): 3.6e-20,52.88 FT 38d in 104 aa" FT /db_xref="InterPro:IPR005149" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HXZ4" FT /protein_id="CAL81653.1" FT /translation="MNDKSQLLRGTLEGCILKIINDKETYGYEIAENLKLYGFKDISEG FT TIYPLLIRLEKNNFLNSTKKPSPYGPKRKYYTLSEKGVEELNYFYTNWLELKNSVDKIF FT SNYSKGED" FT misc_feature complement(126927..127178) FT /note="Pfam match to entry PF03551 PadR, Transcriptional FT regulator PadR-like family, score 102.3, E-value 9.7e-28" FT /inference="protein motif:Pfam:PF03551" FT CDS complement(127314..127952) FT /transl_table=11 FT /locus_tag="CBO0098" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum Zn-dependent FT hydrolases of the metallo-beta-lactamase superfamily FT cac0482 SWALL:Q97LS2 (EMBL:AE007563) (211 aa) fasta scores: FT E(): 2e-35, 44.07 38d in 211 aa, and to Thermoanaerobacter FT tengcongensis predicted Zn-dependent hydrolases of the FT beta-lactamase fold tte2532 SWALL:Q8R787 (EMBL:AE013195) FT (212 aa) fasta scores: E(): 1.4e-31, 44.5 id in 200 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXZ5" FT /protein_id="CAL81654.1" FT /translation="MKIKWLGHSCFILESDTKTTIITDPYEPSIGIHRMDYASDICTIS FT HNHFDHNFKDELNKNCIIIDTPIEYKYEDLKIKGFKSYHDKLNGLKRGNNIIFKFNIDG FT FNVCHLGDLGHLLPKNFIYNLGPIDVLLVPIGGNYTLNGKEAATLCKNLNSHIVIPMHF FT GLNNIKIKLDGLEDFLIHMDKNLEIGSNIITLENNIKNYNNMVYILNMI" FT misc_binding 128105..128364 FT /locus_tag="CBO0099" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 128388..131510 FT /transl_table=11 FT /locus_tag="CBO0099" FT /product="isoleucyl-tRNA synthetase" FT /note="Similar to Pseudomonas fluorescens isoleucyl-tRNA FT synthetase 2 IleS2 SWALL:Q8L1B1 (EMBL:AB062785) (1030 aa) FT fasta scores: E(): 7.8e-137, 36.38 38d in 1006 aa, and to FT Clostridium acetobutylicum isoleucyl-tRNA synthetase FT cac3038 SWALL:Q97ES0 (EMBL:AE007801) (1035 aa) fasta FT scores: E(): 0, 77.71 38d in 1032 aa" FT /db_xref="GOA:A5HXZ6" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002301" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR023586" FT /db_xref="UniProtKB/TrEMBL:A5HXZ6" FT /protein_id="CAL81655.1" FT /translation="MGMYNKIDSNKSFVQREKGIADLWKDRGVIEKSFNLNEDGEYFTF FT YDGPPTANGKPHVGHILTRVMKDLIPRYKVMKGYKVLRKAGWDTHGLPVELEIEKKLGI FT SGKPQIEEYGIEKFVTECKDSVFKYTSLWKQMSEQLGFWVDMDDPYITYDNNYIESVWW FT ALKQMWKKELLYKGHRVTPYCPRCGTALSSHEVAQGYKDVKEATAFVKFKIKGKENKYF FT LAWTTTPWTLPSNVTLAINKSYDYVEILNNDEHYILAKELLGKVIEGEYEVVKEFKGEE FT IVGVEYEQLFKFEVPEKKAFYVVHADYVTLTDGTGIVHTAPAYGDDDSKTGKKYDLPLI FT NLVDSEGKFVDSVEPWKGMFVKKADPKILEYLKENGMLYKSEKFTHSYPHCWRCNTPLL FT YYPKDSWFVRMTSLRDDLVKNNNTINWYPDNIRTGRFGKFVENVIDWGISRDRYWGTPL FT PIWECDCGHRECIGSVEELKEKGINVPENIELHKPYIDAVKLNCPHCGKEMTRTNEVID FT CWFDSGSMPFAQHHYPFENKEVFENTFPAQFISEAVDQTRGWFYTLLAISTALFGKSSY FT ENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWHFYTASAPWLPTRFSEED FT VKETQRKFLSTLWNVYSFYILYADLDNFNPLEYKEFKSEHVMDKWILSKLNSLIKNVEE FT HLDNYRITQAALELEEFVDELSNWYVRRNRSRFWSTELTDDKIGAYTTLYTVLTTVIKV FT AAPFVPFVTEEMYQNLVVNLDKDAEESIHLCKWPSYNESTMDKDLEEKMGLAYKIVKLG FT RSARNSVNIKNRQPLKKMLVSTKELPEYYEDIIREELNIKEILSGADLSDYVNFEIKPN FT LPILGKKYGKFIPAIRKEISSMNQMELAQSINNSRSVFINVEGCEDQIELTAENLLVTM FT QGLEGFAFAGEGEIGVVLDTHITEELKEEGFLREILSKVQNMRKESGFEVADKINLYVS FT GNNTLNAIVKKYEDEIKVETLSVKVMYDENKDYIECKINGENYNIAMEVVK" FT misc_feature 128442..130283 FT /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA FT synthetases class I (I, L, M and V), score 845.2, E-value FT 2.4e-251" FT /inference="protein motif:Pfam:PF00133" FT misc_feature 128535..128570 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature 131217..131237 FT /note="PS00307 Legume lectins beta-chain signature." FT /inference="protein motif:ProSite:PS00307" FT CDS 131661..132659 FT /transl_table=11 FT /gene="ccpA" FT /gene_synonym="regA" FT /gene_synonym="repA" FT /locus_tag="CBO0100" FT /product="LacI-family transcriptional regulator (catabolite FT control protein)" FT /note="Similar to Clostridium saccharobutylicum hth-type FT transcriptional regulator RegA or RepA SWALL:REGA_CLOSA FT (SWALL:Q45831) (332 aa) fasta scores: E(): 1.2e-72, 65.75 FT id in 330 aa, and to Bacillus megaterium glucose-resistance FT amylase regulator CcpA SWALL:CCPA_BACME (SWALL:P46828) (332 FT aa) fasta scores: E(): 3.2e-45, 44.61 id in 334 aa" FT /db_xref="GOA:A5HXZ7" FT /db_xref="InterPro:IPR000843" FT /db_xref="InterPro:IPR001761" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5HXZ7" FT /protein_id="CAL81656.1" FT /translation="MAVSIKDVAKEAQVSIATVSRVLNNIDVVNEDTKKKVLDAIDKLG FT YRPNIVARSLKTQKSKTIGIIIPDISNQFYPEIVRGAEDVANIYDYNIMLCNTDLDPEK FT EMEYLRVLREKMADGVLYMSNSLEKNILELIKSLQLPVVLVETKDSEEKLPSVTIDNLK FT ASLDATEYLINKGNKNIAYIGLHEDMANAAVLRYEGYKLALRKNNIKENKDLVYLGGMK FT VRDGYEGINKILEKEKIDAIFCADDEIAMGAINALRDKNIKVPDEIDVMGFNNIYSSNV FT FYPKLTTIGQPMYDMGSVGMRMLIKIINKEELENDNYVLQHKIVERDSCKK" FT misc_feature 131667..131732 FT /note="Predicted helix-turn-helix motif with score FT 1870.000, SD 5.56 at aa 3-24, sequence FT VSIKDVAKEAQVSIATVSRVLN" FT misc_feature 131667..131744 FT /note="Pfam match to entry PF00356 lacI, Bacterial FT regulatory proteins, lacI family, score 41.5, E-value FT 2e-09" FT /inference="protein motif:Pfam:PF00356" FT misc_feature 131673..131729 FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature." FT /inference="protein motif:ProSite:PS00356" FT misc_feature 131838..132644 FT /note="Pfam match to entry PF00532 FT Peripla_BP_like,Periplasmic binding proteins and sugar FT binding domain of the LacI family, score 121.2, E-value FT 2e-33" FT /inference="protein motif:Pfam:PF00532" FT CDS 132875..136927 FT /transl_table=11 FT /locus_tag="CBO0101" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani DNA helicase ctc00264 FT SWALL:Q899C1 (EMBL:AE015936) (1352 aa) fasta scores: E(): FT 1e-180, 40.17 38d in 1359 aa, and to Clostridium FT acetobutylicum superfamily i DNA helicase cac3036 FT SWALL:Q97ES1 (EMBL:AE007800) (1351 aa) fasta scores: E(): FT 2.2e-177, 41.54 38d in 1343 aa" FT /db_xref="UniProtKB/TrEMBL:A5HXZ8" FT /protein_id="CAL81657.1" FT /translation="MKCSEKIKNIFYYLLRIKRMNKCSSDVRTYEALYTKKDILNNSYC FT NVSRDKEDNVTIKISKEAGKIYDKIYKQYLDGGNENEIILGQAILALRKNKNIIHPVIT FT SKVKVDFIDKENVLSLKIPSNIKLEIEVCDCLNKTLFKKIISRKNDWEKEKIDIMNYDN FT IKNKIQLLLNNDSEIVFKDIEDLNKIEITEEPVIYNCPILVIRKADNSLWSKEFQSIVE FT EIDNGYDIPKTIEALVEEKEIEDDYIHKDQWKECKEDILFPLDANEEQISIVKKICENE FT AILVQGPPGTGKSHTIANLICHFLAHGKKVLITSETSRALRVLINKIPKDIKPLCVNLL FT DDNNGEYELEQCIKNISDNLCKNPSEIIDDIYILNNERKECKKNQQVLYNKLKEIEFME FT NKKIHCKGNYYKLIHIGSWLNENEYKYGWIRDNIRYEDIKPVNEDQFNKLIELLKNNGK FT EYIGNINELIFICNKIPSYNEVENKLDRMIYLESNLNFYKNKIKGWYIPAECKCNYDIL FT SDFLYDCIEKMKSIIEEPILGKMFELYYSSEIFRDSINNFMLNLNSSKEKLIKIRENIN FT QYSIEIKEIKDKDMFIKDYEKVYSKIKGKKKISKIFKAINSKYDYIFKNCYINGENIKS FT IEQLNIINDYIEERKIYNFLNRLWENIINSYIQEDSNYNIDNLISIERITNNLDTIMNW FT NREYRDKIIKLLGRIRIPININWYEINTYEYFIQCIECIKAINEYNDLKAFMEIIKKQV FT RNFQSLNSIIKGIDKENIDYIKEAYSYIEKIMSMKSDMDEINYVYKKLEESCPRTLEFI FT LENYKKNYKFNSWENAWKWAQYNNLFKKLEKIDEKTLQGQLIEEKNKEKEIINQIISKK FT AWKNIILNINEEEKRSLFSWVQAVKRIGKGRGKFVLQYSNIAKKEMEKCKSIIPVWIMP FT LEKVIENIKPSKEQFDVVIFDESSQSNIFAISALMRAKKAIIVGDDKQISPEIVGMDQG FT MISNFIDKYLDGIPHNQWFDLQTSLYDTALRTFKDRIMLKEHFRSVPEIVQFSNKLCYG FT DLIVPLRYPKIREAFNSPIKCIKVEDGYREKTKQININEAEALVNKLLECCRDSKYNGM FT TMGVISLLGDAQSEFIENLLKNNLSKEEIKRRKLVCGDAYSFQGDERDIIFLSMVVGDN FT MKYTALTKETDIKRFNVAVSRARNQIFLFYSIDYKNINNDCVRYKLIDYCNNYKNYKSK FT LPDINYVMESKFQKDIYNNIRNLKCDIKSNIKLGKYIIDFILEGEHNRIAIICDDGNLY FT ENNNVEKVLNLEMDLTRLGWAFYKIRGSKFYRNPEVEVEKLHKFLIESGLYKDDSKEIL FT KNNLLVV" FT misc_feature 133733..133756 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 137002..138069 FT /transl_table=11 FT /locus_tag="CBO0102" FT /product="mannose-1-phosphate guanylyltransferase" FT /EC_number="2.7.7.22" FT /note="Similar to Escherichia coli mannose-1-phosphate FT guanylyltransferase manc or rfbm or rfbm1 SWALL:RFM9_ECOLI FT (SWALL:P37753) (471 aa) fasta scores: E(): 5.4e-36, 36.51 FT id in 356 aa, and to Clostridium tetani mannose-6-phosphate FT isomerase ctc00265 SWALL:Q899C0 (EMBL:AE015936) (355 aa) FT fasta scores: E(): 5.9e-94,70.33 38d in 354 aa" FT /db_xref="GOA:A5HXZ9" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:A5HXZ9" FT /protein_id="CAL81658.1" FT /translation="MLYALILAGGKGTRLYPLSRSENPKQFLKVINNRSFLRATVDRIK FT PLVNNDNIYIVTNEEYMDKIYEELPEIKKENIFAEPYNRETATCIGFSAVKLLKKDKDA FT SMIVLPSDHYIENEKEFTDVIKQGVDIVEKKRGLVTIGIKPLRPETGYGYIKMGDKVNS FT QSFTYKVERFLEKPNLEIARDLVSSEEYLWNSGMFIWRADVYLREMEKYLPKIYKSMMR FT IYANIDTDQEEKVIREEYEVIEGISVDFGIMQKTRKAYVIESNFKWDDMGSFTALSRFL FT NSCRDNSICSNSYLKESENCSVITKDKLVIGFGIKDLVIVDGGDVLLIMDKYKDQEIKH FT LVQELKANESLKKYI" FT misc_feature 137008..137862 FT /note="Pfam match to entry PF00483 FT NTP_transferase,Nucleotidyl transferase, score 194.3, FT E-value 1.9e-55" FT /inference="protein motif:Pfam:PF00483" FT misc_feature 137890..138048 FT /note="Pfam match to entry PF01050 FT MannoseP_isomer,Mannose-6-phosphate isomerase, score 39.8, FT E-value 5.4e-10" FT /inference="protein motif:Pfam:PF01050" FT CDS 138405..139694 FT /transl_table=11 FT /locus_tag="CBO0103" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT upf0272 protein Cac0774 SWALL:Y774_CLOAB (SWALL:Q97KZ2) FT (420 aa) fasta scores: E(): 5e-86, 59.19 38d in 424 aa,and FT to Wolinella succinogenes hypothetical protein ws0139 FT SWALL:CAE09302 (EMBL:BX571657) (396 aa) fasta scores: E(): FT 4e-48, 44.26 38d in 427 aa" FT /db_xref="InterPro:IPR002822" FT /db_xref="UniProtKB/TrEMBL:A5HY00" FT /protein_id="CAL81659.1" FT /translation="MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEF FT EIKINKDSRKGISGTKVDVILKNLHEHNHEHEHSHDYVHSRGHEHEHNHEHSHEHEHNH FT AHDHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFHEVGATDS FT IVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILKDIPMVSSEE FT IPFEATTPTGAAIVASTVYKFTQNKNFYIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQE FT ENDIEKEEALILECNIDDMNSEIYEYVINKLLHEGASDAYITPIIMKKTRPAAKLTVLC FT ENKLENIMREIIFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQVLNS FT KPEYEDCKKIALENNIPIKEVYEAVNERKE" FT misc_feature 138414..139691 FT /note="Pfam match to entry PF01969 DUF111, Protein of FT unknown function DUF111, score 382.4, E-value 4.7e-112" FT /inference="protein motif:Pfam:PF01969" FT CDS 139699..140505 FT /transl_table=11 FT /locus_tag="CBO0104" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum ATP-utilizing FT enzyme of the pp-loop superfamily cac0775 SWALL:Q97KZ1 FT (EMBL:AE007592) (271 aa) fasta scores: E(): 9.6e-58,59.62 FT 38d in 265 aa, and to Thermoanaerobacter tengcongensis FT ATP-utilizing enzymes of the pp-loop superfamily tte0769 FT SWALL:Q8RBP5 (EMBL:AE013044) (255 aa) fasta scores: E(): FT 7.3e-44, 54.09 38d in 244 aa" FT /db_xref="InterPro:IPR005232" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR022310" FT /db_xref="UniProtKB/TrEMBL:A5HY01" FT /protein_id="CAL81660.1" FT /translation="MNINDKYNNLINYLKDLKSVAVAFSGGVDSTLLLKSAKEALGDNA FT ISITIVSPYIPKWEIREARELVDKIGIKSYFVEVPMLEEIRSNPEDRCYICKKSVFNKI FT KDLAREKGIKYIVDGTNADDTKDYRPGMRALKELDVKSPLLDNSINKEEIRVLSKELQL FT DTWDKPAYACLLSRIPYNQKIKEKDLDRIEKAEVYMMKLGFRAVRVRSHGNLARIEVPQ FT KERVKLFNEDILDKISKELKELGFKYVTVDIEGYKMGSLNAEINMK" FT CDS 140525..141271 FT /transl_table=11 FT /locus_tag="CBO0105" FT /product="conserved hypothetical protein" FT /note="Similar to Myxococcus xanthus phosphoribosyl amino FT imidizole carboxylase-like protein SWALL:Q8VQZ2 FT (EMBL:AF449411) (250 aa) fasta scores: E(): 2.7e-43,52.43 FT 38d in 246 aa, and to Clostridium acetobutylicum ncair FT mutase cac0776 SWALL:Q97KZ0 (EMBL:AE007592) (248 aa) fasta FT scores: E(): 4.2e-63, 71.37 38d in 248 aa" FT /db_xref="GOA:A5HY02" FT /db_xref="InterPro:IPR000031" FT /db_xref="UniProtKB/TrEMBL:A5HY02" FT /protein_id="CAL81661.1" FT /translation="MNTEDIKKLLLDIKSDKISLEDGVDILQDLPFKDLGYAKIDNHRE FT MRVGYPEVIYCAGKTVDQIKGIIEFMLTKENNILGTRATKEAYEEVKKICPEAEYDELA FT RTIVIKKREVKSKGGYIAVVTAGTSDIPVSEEAAVTAEIFGNKVERIYDVGVAGIHRLF FT DKLELIRGARVIVVAAGMEGALASVVGGLVDKPVIAVPTSIGYGANFQGLSALLSMLNS FT CASGVSVVNIDNGFGAGYLASMINNL" FT CDS 141496..142878 FT /transl_table=11 FT /locus_tag="CBO0106" FT /product="radical SAM superfamily protein" FT /note="Similar to Clostridium tetani Fe-s oxidoreductase FT ctc00266 SWALL:Q899B9 (EMBL:AE015936) (460 aa) fasta FT scores: E(): 2.1e-137, 71.08 38d in 460 aa, and to FT Clostridium acetobutylicum moaa/nirj family fe-s FT oxidoreductase cac2791 SWALL:Q97FE9 (EMBL:AE007776) (461 FT aa) fasta scores: E(): 2.8e-119, 61.6 38d in 461 aa" FT /db_xref="GOA:A5HY03" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5HY03" FT /protein_id="CAL81662.1" FT /translation="MKVIKLLEKSAKDKMIKTAAGLLSTNPEKNVDRLFTLIEKTIAKD FT EDNLKRLKVVEDEYHNNPSTHEFVQNLFKTTDKNCIQKFFTNFFANAVWYGMPKREKLF FT KEDGIKTPFVILISPSMRCNLRCTGCYAANYSKEDDIPYEEVDRIIEEAREIGIYYFIV FT LGGEPFFNEYMLDIYEKYNDCIFMPFTNGTLFNEKLADKVQKLGNIIPMFSLEGFEKET FT DARRGKGVFKQVMHGMDLLRERGVLFGVSTATGRNNIDTVISDEFINMLIEKGAKMSWY FT FIFMPVGEDPDFNLMLTPEQRIYLGKEVRKIRNEKPYFAIDFFNDAPYVGGCIAGKYYC FT HINSHEDVEPCIFAHFATDNLKNKKLIDVFKSPFFKELRDRQPYNDNLLKPCMMIDNPK FT VIREVASKTGARPTDKGAEMMLHDEVFKSKLDKLAKDFDPLAEKAWKEDFHGKGNYEMS FT KG" FT misc_feature 141844..142299 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 79.0, E-value 1e-20" FT /inference="protein motif:Pfam:PF04055" FT CDS 143065..144339 FT /transl_table=11 FT /locus_tag="CBO0107" FT /product="solute-binding protein" FT /note="Similar to Agrobacterium radiobacter lactose-binding FT protein precursor LacE SWALL:LACE_AGRRD (SWALL:P29822) (422 FT aa) fasta scores: E(): 1.9e-12, 21.24 id in 386 aa, and to FT Clostridium acetobutylicum sugar-binding periplasmic FT protein cac2912 SWALL:Q97F41 (EMBL:AE007788) (432 aa) fasta FT scores: E(): 4.3e-18,22.63 38d in 433 aa" FT /db_xref="GOA:A5HY04" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:A5HY04" FT /protein_id="CAL81663.1" FT /translation="MKKKKFIYIGIVVILIVAIILVILGRYNNTKNFTKDKLVIWGDVK FT NNQAMNEGVKAFKEKYPNVEVEFYNKNRENMIDEFSKIKDKNSYPNIICLDDKDIKEFG FT ARYYKDLIILNEIMKNNIKDFISCKRELVKLYDNFIAVPYTVEPVALYYRKDLLEKYNI FT NSEDIKTWDDFIKAGEEIYKKSNGKVKMISFNKSDNSMLEVLLNEKGIYYFDKDSKLQI FT DQPGYIDAFNILKRIESSNIDFDNKGDFKLFVNNSNVVCIPYNSELANHLISGRKQENG FT KWKIMKLPSFEVGGKNSAIAGGTSIVGIKSCKESKDKLSMELIKNIALNKQSLNKGFLN FT YGQFPSYKPTYEYARFFQNVNYFNEEKIWRVFVDIASKAPSINYTKNYNSVQKIMTDFK FT KELLNSNDVEKELKNIKIFINSITK" FT sig_peptide 143065..143146 FT /locus_tag="CBO0107" FT /note="probabilty 0.984, with cleavage site probability FT 0.394 between residues 28 and 29" FT /inference="protein motif:SignalP:2.0" FT misc_feature 143092..144066 FT /note="Pfam match to entry PF01547 SBP_bac_1, Bacterial FT extracellular solute-binding protein, score 28.8, E-value FT 1.3e-05" FT /inference="protein motif:Pfam:PF01547" FT CDS complement(144441..145556) FT /transl_table=11 FT /locus_tag="CBO0108" FT /product="putative glycosyl transferase" FT /note="Similar to Escherichia coli mannosyltransferase B FT MtfB SWALL:Q47594 (EMBL:D43637) (381 aa) fasta scores: E(): FT 2.5e-24, 30.58 38d in 291 aa, and to Clostridium tetani FT mannosyltransferase ctc00268 SWALL:Q899B7 (EMBL:AE015936) FT (374 aa) fasta scores: E(): 2.1e-77,55.94 38d in 370 aa" FT /note="Also similar to the nearby CDS, CBO0113, (44.892 FT ide. in 372 aa overlap)" FT /db_xref="GOA:A5HY05" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:A5HY05" FT /protein_id="CAL81664.1" FT /translation="MNISIDGRGINWYKGTGIGTYTEKVLTNMIGKTTEDSFNIYWSGD FT DYLKFKKHNTNIILTSKKHSKFFEQTYIPYDLNNINSDIYHIPQNGIGISENISCKIIV FT TIHDLIPYIMPETVGKGYLNKFLKDMPRIIELSDKIITVSEWSKKDILKFFPMREDKIE FT VIPLAADSKYRPLNKLYCKNILKKKYGINLPYILYLGGFSSRKNVDSIIKAFEKIYAKL FT PQEHALVIVGSKKDEGEKLYEFSSKLKISSNIIFTDFVEEQDLPIFYNGCSVFIYPSLY FT EGFGLPPLEAMSCGCAVIASNVTSIPEVTSDCCINIDPLDIDDMSNSIENILKNPDLKD FT TLSKKAFERSMLFSWSKTAENTLNLYKSVLK" FT misc_feature complement(144510..145013) FT /note="Pfam match to entry PF00534 Glycos_transf_1,Glycosyl FT transferases group 1, score 135.9, E-value 7.8e-38" FT /inference="protein motif:Pfam:PF00534" FT CDS 145722..146732 FT /transl_table=11 FT /locus_tag="CBO0109" FT /product="spore coat protein" FT /note="Similar to Bacillus subtilis spore coat protein S FT CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa) FT fasta scores: E(): 4.6e-06, 19.63 38d in 331 aa, and to FT Clostridium acetobutylicum spore coat protein CotS related FT cac2910 SWALL:Q97F43 (EMBL:AE007788) (335 aa) fasta scores: FT E(): 3.8e-69, 52.25 38d in 333 aa" FT /db_xref="GOA:A5HY06" FT /db_xref="InterPro:IPR002575" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR014255" FT /db_xref="UniProtKB/TrEMBL:A5HY06" FT /protein_id="CAL81665.1" FT /translation="MDKSEIISIVENNYNININSIEKIKNVYKIISDSNKTYAFKIIKY FT EFNHFLFIISCMKHLQYNNFSKIPQIIPNNKGLDYIKIGDFYGYITEWIEGSRQCNYSN FT PVEVMMAANKLGQLHEKSKNFYITENMKPRIGWFKWPKTFQTRKDEILDFEKRILNKNK FT KSEFDNFYINILEDEIERADRSIKNLCETNYLNVMLRQIEDRCFCHHDYANHNILIDSE FT NQIYIIDFDYCMLDTKLHDLASILIRVMKNGKWDLKSAELILNSYRKESYIDKESIPII FT AAFMEFPQDYWQIGIQHYWEKQPWSEEFFFNKLNRYHEDREERQEFIEKFRRINI" FT misc_feature 146340..146378 FT /note="PS00109 Tyrosine protein kinases specific FT active-site signature." FT /inference="protein motif:ProSite:PS00109" FT CDS 146747..146941 FT /transl_table=11 FT /locus_tag="CBO0110" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HY07" FT /protein_id="CAL81666.1" FT /translation="MSRKKKYYEDIKENMSELDKYEEELQELKKSVKKLKEIKKRKKKI FT NKLKDEEKEVLKKIRKKYK" FT CDS 146968..147735 FT /transl_table=11 FT /locus_tag="CBO0111" FT /product="spore coat protein" FT /note="Similar to Clostridium tetani putative spore coat FT protein ctc00270 SWALL:Q899B5 (EMBL:AE015936) (256 aa) FT fasta scores: E(): 1.2e-19, 35.84 38d in 226 aa, and to FT Clostridium acetobutylicum spore coat protein CotS related FT cac2909 SWALL:Q97F44 (EMBL:AE007788) (251 aa) fasta scores: FT E(): 1.5e-18, 31.78 38d in 258 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY08" FT /protein_id="CAL81667.1" FT /translation="MDSLKKITDISHYLKSKDINIIKDFKDDNRELDNLSEELVIEQLR FT IISLFHKNTLGNKSYIRGGIKNKTGSIVEKYKLDLKKINKYIRSLKDKEINNTDLEKLI FT LDYMPNYINRAEKVIENIYENGYINLVWRSMDRKEICLGKTYFNNIRYNKGIEVIDINK FT CSYNMVEMDCIELLYKVNKKNSSVDIERLCKIFCEFESLNDESYKFILYMLSYPYSLIK FT CCTKYMKEKDSDKEKHYMDRFNKAMKLDSNSFV" FT CDS 147748..148761 FT /transl_table=11 FT /locus_tag="CBO0112" FT /product="spore coat protein" FT /note="Similar to Bacillus subtilis spore coat protein S FT CotS or bsu30900 SWALL:COTS_BACSU (SWALL:P46914) (351 aa) FT fasta scores: E(): 5.4e-11, 25.43 38d in 342 aa, and to FT Clostridium acetobutylicum spore coat protein CotS related FT cac2908 SWALL:Q97F45 (EMBL:AE007788) (344 aa) fasta scores: FT E(): 6.1e-61, 49.84 38d in 331 aa. Also similar to CBO0114 FT (32.390 38d), CBO0109 (32.537) and to CBO0111 (21.756)." FT /db_xref="GOA:A5HY09" FT /db_xref="InterPro:IPR002573" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR014255" FT /db_xref="UniProtKB/TrEMBL:A5HY09" FT /protein_id="CAL81668.1" FT /translation="MDKLNKNYLKKYNLSSDLFDQYDFIIKDIYPIRNVYIIDTSKGKK FT ILKKVNYTVEELKFIEEIIDYIKIGFKRIMDFEKNIQGDIYTIYKGEMYCLMDLIDGRE FT CQFSNPLDLKISSVALAQMHKASKGFTTNFNKRVLNGKSIEKFKIQKEEMNFFKKIANI FT HKNKNEFDDLFLSEIDSYIDEISKSINILENSHYYDICKENDKISICHHDLAYHNILIK FT EDEAYFIDFDYAILDLKVNDLCNFITKVIKNFAFDINKANIILNSYSSIYSITDKELEV FT LYGLLSFPYDFYDISKNYYTKRKDWEDEVFLNRLIKKCNYKEDRKEFLKNFKDNIL" FT misc_feature 148372..148410 FT /note="PS00109 Tyrosine protein kinases specific FT active-site signature." FT /inference="protein motif:ProSite:PS00109" FT repeat_region complement(148769..148955) FT /note="intergenic repeat 1" FT CDS complement(149116..150243) FT /transl_table=11 FT /locus_tag="CBO0113" FT /product="putative glycosyl transferase" FT /note="Similar to Escherichia coli mannosyltransferase B FT MtfB SWALL:Q47594 (EMBL:D43637) (381 aa) fasta scores: E(): FT 8.8e-32, 32.55 38d in 384 aa, and to Clostridium tetani FT mannosyltransferase ctc00272 SWALL:Q899B3 (EMBL:AE015936) FT (384 aa) fasta scores: E(): 1.5e-84,60.85 38d in 373 aa" FT /note="Also similar to the nearby CDS, CBO0108, (44.892 FT ide. in 372 aa overlap)" FT /db_xref="GOA:A5HY10" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:A5HY10" FT /protein_id="CAL81669.1" FT /translation="MRIGIDGRPAYWYRGTGIGTYTYQLISSLNKVDKKNDYLIFNPEF FT SNSPLKLNNNFNIKNINAHSPKNFWNEVNIPAILKNNSMDIYHVPQNGVGLPKNKNCKF FT IITLHDVIPYRMPETVSDRYLKIFSEEIPKIVSSADGIITVSDFSKKDIMKSFNYPEDK FT IFVTHLASEDIYMPLNKEFCRNILKMKYNINKNFILYVGGFSPRKNILGLIDAFYNLIN FT IYKKDISLVIVGRKGKIYEKYIERVRELNMEDKVFFPGFISVKDLPYFYNCAEIFVYPS FT FYEGFGLPPIEAMACGTPVITSNVTSIPEITKDAAMLINPYDTDSICKAMYTALSNENM FT KNILIKRGLNRTSQLTWNNCAKSTLLAYKKILCSN" FT misc_feature complement(149191..149694) FT /note="Pfam match to entry PF00534 Glycos_transf_1,Glycosyl FT transferases group 1, score 164.8, E-value 1.6e-46" FT /inference="protein motif:Pfam:PF00534" FT CDS 150360..151364 FT /transl_table=11 FT /locus_tag="CBO0114" FT /product="spore coat protein" FT /note="Similar to Bacillus subtilis YtaA protein FT SWALL:O34656 (EMBL:Z99119) (357 aa) fasta scores: E(): FT 1.3e-20, 28.1 38d in 306 aa, and to Clostridium tetani FT spore coat protein ctc00273 SWALL:Q899B2 (EMBL:AE015936) FT (337 aa) fasta scores: E(): 8.4e-95, 71.85 38d in 334 aa. FT Also similar to CBO0112 (32.390 38d), CBO0109 (31.077)." FT /db_xref="GOA:A5HY11" FT /db_xref="InterPro:IPR002573" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR014255" FT /db_xref="UniProtKB/TrEMBL:A5HY11" FT /protein_id="CAL81670.1" FT /translation="MMREFEIERQFNIKIEKLKPHRGVYHLKTNEGDRCLKKINYGVQK FT LLFVSGAKEHLMKNGFDYVDNYFLNLNEEPYALVNEDIYTLSEWIEGRECNFRDKEDLI FT SAARALAYLHIASKGYEPPENSKLKTDLGRWPNLMKKRVRSLDKMREMIRKNNNKTDFD FT LSYIKNIEFYKELGKRSMKVLEDSAYMEICKKTEEEKSFCHHDYTYHNIIIDKNDTINV FT IDFDYCKREIKTYDISNFMIKVLKRVDWNIEYAELILNSYTAINPLKEEEYRTLFAFLL FT FPQRFWRLSNRYYYNEVTWPSNTFNKKMEELISEKDKYINFIEEFKKIYSQKE" FT misc_feature 150963..151001 FT /note="PS00109 Tyrosine protein kinases specific FT active-site signature." FT /inference="protein motif:ProSite:PS00109" FT CDS 151488..152390 FT /transl_table=11 FT /locus_tag="CBO0115" FT /product="probable peptidase" FT /note="Similar to Clostridium tetani conserved protein FT ctc00279 SWALL:Q899A6 (EMBL:AE015936) (300 aa) fasta FT scores: E(): 3.5e-69, 65.21 38d in 299 aa, and to FT Clostridium acetobutylicum uncharacterized protein, yabg FT b.subtilis ortholog cac2905 SWALL:Q97F48 (EMBL:AE007788) FT (300 aa) fasta scores: E(): 8.1e-69, 61.79 38d in 301 aa" FT /db_xref="InterPro:IPR008764" FT /db_xref="UniProtKB/TrEMBL:A5HY12" FT /protein_id="CAL81671.1" FT /translation="MEIGDIVVRKSYKKDITFKIIDIKQEQGREIYTLKGVNVRIIADS FT PYEDLEEVSVATMTKKEEVFTSKVNDSIKKILDDRKFRGGDKGKHLNKKSKIEKMYRTN FT KNIKTKELYFGRPGKILHIDGDSEYLDTCLKVYKQLQLDVVGEKVLEKEQPDKILSLVK FT LYKPDIVVITGHDAVLKEAENYTDINNYRNSKYFVKTVGVLRDYERNYDDLIIFAGACQ FT SCYEAILDAGANYASSPGRVLIHCLDPVFLCEKIAYTNISNIVSIEDALENTITGIKGI FT GGLQTRGKYREGFPKSEYV" FT misc_feature 151488..152384 FT /note="Pfam match to entry PF05582 Peptidase_U57, YabG FT peptidase U57, score 596.9, E-value 1.3e-176" FT /inference="protein motif:Pfam:PF05582" FT CDS 152586..152822 FT /transl_table=11 FT /locus_tag="CBO0116" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis Veg protein or bsu00440 FT SWALL:VEG_BACSU (SWALL:P37466) (86 aa) fasta scores: E(): FT 5.9e-12, 52.77 38d in 72 aa, and to Clostridium FT acetobutylicum uncharacterized protein, Veg b.subtilis FT ortholog cac2904 SWALL:Q97F49 (EMBL:AE007788) (78 aa) fasta FT scores: E(): 3.2e-18, 69.73 38d in 76 aa" FT /db_xref="InterPro:IPR009366" FT /db_xref="UniProtKB/TrEMBL:A5HY13" FT /protein_id="CAL81672.1" FT /translation="MERKNVIANIKRDIESHVGERVTLKANGGRRKTFVNEGVLEEAYP FT SIFVIRLEDDTQRKVTYSYSDVLTKTVQLDFVL" FT misc_feature 152604..152819 FT /note="Pfam match to entry PF06257 DUF1021, Protein of FT unknown function (DUF1021), score 143.9, E-value 3e-40" FT /inference="protein motif:Pfam:PF06257" FT CDS 152927..154489 FT /transl_table=11 FT /locus_tag="CBO0117" FT /product="putative peptidoglycan binding protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00280 SWALL:Q899A5 (EMBL:AE015936) (520 aa) fasta FT scores: E(): 8e-105, 53.07 38d in 520 aa, and to FT Clostridium acetobutylicum lysm domain containing membrane FT protein cac2903 SWALL:Q97F50 (EMBL:AE007787) (520 aa) fasta FT scores: E(): 1.9e-86, 45.76 38d in 520 aa" FT /db_xref="GOA:A5HY14" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR018392" FT /db_xref="InterPro:IPR024300" FT /db_xref="UniProtKB/TrEMBL:A5HY14" FT /protein_id="CAL81673.1" FT /translation="MDLNLLKENIECEQLLGENFVNTPVKGEYVIPDTHPDVYEVLMLD FT AKPYITSKEVMQDKLYMEGYIDYNILYLAKEEEKGVLYNTRYSSKFSNDIQISGTEKDM FT LCEAECFVEDMYCKIVNERKISIEGIVRLKGAVYKKYNFEIIKDLDALQDIQMLRNPIS FT IDKIAGTATGELLVKTSVKIGADKPEIGSILKTNLNIHKKKITVLDDKVNVEAFAKIEL FT IYRAKESRDICYVVDDIFIDKEVELKGVNSFMESYTDFTVDGINTEPKEDDLGESRIID FT VEALVKSNTRVMYKKEIEVIEDMYSPNMLLNMNKEDYELNVMQGHSKNESIVKENIEIA FT SSMPSIREIIMTEGKAYITEKKIVEDKVVVEGILNAEVMYKTTEDGKYIYNLKEDIPFS FT CAVDIPGAKIDMQCMTKVVLEDVEANIEANTVAVKALIEVYSRVNYTSHKEFLVNVEPM FT EEEVPEKKSSITIYVVQQGDTLWKIAKRYYTTVDNLVLINEIDNPDVIKPGQKLIIPGK FT AII" FT misc_feature 154340..154471 FT /note="Pfam match to entry PF01476 LysM, LysM domain,score FT 73.5, E-value 4.7e-19" FT /inference="protein motif:Pfam:PF01476" FT repeat_region 154634..154692 FT repeat_region complement(154634..154724) FT /note="intergenic repeat 1" FT CDS 154869..155669 FT /transl_table=11 FT /gene="cphB" FT /locus_tag="CBO0119" FT /product="cyanophycinase" FT /note="Similar to Synechococcus elongatus cyanophycinase FT CphB or tlr2169 SWALL:CPHB_SYNEL (SWALL:Q9F2I8) (322 aa) FT fasta scores: E(): 3.5e-32, 38.28 38d in 256 aa, and to FT Clostridium tetani cyanophycinase ctc00281 SWALL:Q899A4 FT (EMBL:AE015936) (268 aa) fasta scores: E(): 8e-68, 69.58 id FT in 263 aa" FT /db_xref="GOA:A5HY15" FT /db_xref="InterPro:IPR005320" FT /db_xref="InterPro:IPR011811" FT /db_xref="UniProtKB/TrEMBL:A5HY15" FT /protein_id="CAL81674.1" FT /translation="MQRKIQGNLIIIGGAEDKKNGKDILKEVCKKIDKEKEELLIATVA FT SELPEELGEEYTNIFKNLGVKNVKILNINNRKDTHYEGNVNLIKNASLIFFTGGDQLRI FT TSLLGGTPLYRALERAYKEGCIFVGTSAGASVMSDTMIVSGLDDESPRKCTLKMAPGLS FT LIRGVIIDQHFAQRGRIGRLLTGIAENPQWLGIGIDEDTAIIVNPEGQFKVIGSGAVYI FT IDGTEISGTNVSEQYPDEILSIFDVKLHVLKNRDKFDLNYRRPI" FT misc_feature 155010..155666 FT /note="Pfam match to entry PF03575 Peptidase_S51,Peptidase FT family S51, score 244.5, E-value 1.6e-70" FT /inference="protein motif:Pfam:PF03575" FT CDS 155713..158334 FT /transl_table=11 FT /gene="cphA" FT /locus_tag="CBO0120" FT /product="cyanophycin synthetase" FT /EC_number="6.-.-.-" FT /note="Similar to Anabaena variabilis cyanophycin FT synthetase CphA SWALL:CPHA_ANAVA (SWALL:O86109) (901 aa) FT fasta scores: E(): 5.5e-116, 39.86 38d in 868 aa, and to FT Clostridium tetani cyanophycin synthetase ctc00282 FT SWALL:Q899A3 (EMBL:AE015936) (874 aa) fasta scores: E(): FT 3e-189, 57.98 38d in 864 aa" FT /db_xref="GOA:A5HY16" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR011810" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR013651" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR018109" FT /db_xref="UniProtKB/TrEMBL:A5HY16" FT /protein_id="CAL81675.1" FT /translation="MKIENIRVFEGRNIYSHKKCIRMDVDLEGYSNISSKEIQEFNKTL FT LNYVPELREHCCCVGKKGGFVERLYEGTYLSHICEHVIIALQNRIGIDVSYGKAREIEG FT EKYYIIYQYKYKNMAIECGKIAVDLINNIINGKRYNIKTKTRELVCLLKTEELGPSTLS FT IIQEAKKRNIPVTKIGEDSMFQLGYGIKGKTIEATICNSTSAVSVDIACDKLLSKNILM FT DQCIPVAEGYKVKNYIDLLFKAEKLGYPVVLKPRFGNQGKGVVVNIKNQKELVNAYSIV FT NKKFQDIMIEKYINGKDYRACVVDGKVVAVAQRIPPYIIGNGKSTIYELIKELNRDERR FT GDGHEKPLTKVKIDKDLKNNINKEGYTLGYILPEEYKLELRHNANLSTGGVAIDCTDLI FT CTETREVCERAAKAIGLNICGIDICCSDISKPLKENEGIMEVNAAPGIRMHQYPYKGKS FT RNVAKAIVDMMFKEYDGNIPIISITGTNGKTTTTRLIAHILSFSGKKVGMTTTGGIYIN FT NKCINKGDTTGYYSAKTVLTNKEAEVAVLELARGGLIRDGLPYDLADVGIITNVTEDHL FT GLGGINTLEDMAYVKALVGEAIKKDGYVVINADDEASISIINRMKSKIILFTKNKNNPI FT ISQYLDNKNLVLYLDEDTIYLKKLNKNEEIINVNKIPITLGGKLIYNVENAMAAIAALI FT ALGIDVNTIRQGLESFSNEEQNPGRFNMYNVHGTNVILDYGHNIEGYKVVLESIKKIKH FT KRIIGVVGVPGDRTNSSTLKVGNICGENFDYVYIKEDRDKRGRKHGEIADLLKKGILET FT GFKNSKLNIILDEEEALKKAIEFSNPGDLVIMFFEEFEPAENIVKDKIKKGKITKRETA FT LA" FT misc_feature 156271..156294 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 156952..157824 FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, catalytic domain, score 126.5, E-value 5.2e-35" FT /inference="protein motif:Pfam:PF01225" FT misc_feature 157150..157221 FT /note="PS01011 Folylpolyglutamate synthase signature 1." FT /inference="protein motif:ProSite:PS01011" FT misc_feature 157858..158124 FT /note="Pfam match to entry PF02875 Mur_ligase_C, Mur ligase FT family, glutamate ligase domain, score 46.8,E-value FT 5.1e-11" FT /inference="protein motif:Pfam:PF02875" FT CDS 158427..159269 FT /transl_table=11 FT /gene="ispE" FT /gene_synonym="ipk" FT /locus_tag="CBO0121" FT /product="4-diphosphocytidyl-2-c-methyl-D-erythritol FT kinase" FT /EC_number="2.7.1.148" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase FT IspE or Ipk or b1208 or z1979 or ecs1713 SWALL:ISPE_ECOLI FT (SWALL:P24209) (283 aa) fasta scores: E(): 2.2e-13, 32.44 FT id in 262 aa, and to Clostridium perfringens FT 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE or FT Ipk or cpe2212 SWALL:ISPE_CLOPE (SWALL:Q8XIA9) (288 aa) FT fasta scores: E(): 2e-59, 61.48 38d in 283 aa" FT /db_xref="GOA:A5HY17" FT /db_xref="InterPro:IPR004424" FT /db_xref="InterPro:IPR006204" FT /db_xref="InterPro:IPR013750" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:A5HY17" FT /protein_id="CAL81676.1" FT /translation="MLSKAHAKINLSLDVIGKRKDGYHLLKMLMQTIDLYDLIEIKKIK FT KDIIIDCDREYIPKDRRNLAYKAATLFLDRYNIDSGVRINITKNIPVAAGLAGGSTDAA FT TVLKIMRDIFEPDISNEELKEIALDIGADVPFCIEGGTALCEGIGEKITPIKNFKNHIL FT VLVKPNFGLSTKDVYNNLKVEKIYIHPNTTKLIQSIEEDNLKSVARNMRNVLENVTLRK FT YKALNSIKSNFIELGALGSMMSGSGPSVFGLFDDMLKAQICYDNMREKYKEVFITRTI" FT misc_feature 158667..159266 FT /note="Pfam match to entry PF00288 GHMP_kinases, GHMP FT kinases putative ATP-binding protein, score 107.5, E-value FT 2.8e-29" FT /inference="protein motif:Pfam:PF00288" FT CDS 159435..159632 FT /transl_table=11 FT /locus_tag="CBO0122" FT /product="putative membrane protein" FT /note="Similar to Thermoanaerobacter tengcongensis FT hypothetical protein Tte2556 tte2556 SWALL:Q8R768 FT (EMBL:AE013196) (80 aa) fasta scores: E(): 1.3, 32.75 38d FT in 58 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY18" FT /protein_id="CAL81677.1" FT /translation="MGRIIGIFDKYFLILMLIEGGITMFMDAPSFKKSNMMKSYKQARW FT IGIFIITISLILYILQRILF" FT misc_feature order(159465..159518,159561..159614) FT /note="2 probable transmembrane helices predicted for FT CBO0122 by TMHMM2.0 at aa 11-28 and 43-60" FT /inference="protein motif:TMHMM:2.0" FT CDS 159692..161212 FT /transl_table=11 FT /locus_tag="CBO0123" FT /product="spore germination protein" FT /note="Similar to Bacillus cereus spore germination protein FT GerlA SWALL:Q93N70 (EMBL:AF387344) (492 aa) fasta scores: FT E(): 7.4e-71, 40.43 38d in 502 aa, and to Clostridium FT tetani spore germination protein b1 ctc00285 SWALL:Q899A1 FT (EMBL:AE015936) (492 aa) fasta scores: E(): 3.1e-111, 64.34 FT 38d in 502 aa" FT /db_xref="GOA:A5HY19" FT /db_xref="InterPro:IPR004995" FT /db_xref="UniProtKB/TrEMBL:A5HY19" FT /protein_id="CAL81678.1" FT /translation="MKEVVNDEISKSIDENIKYIKELLEGNSDMVFREFLIGDKKAFIM FT YIDGMADKDLLNDYVLESLMLESEKLGNISDIKNRISNKRYESNDKCNVNDIKNKILTV FT TDVSEKDKLSKAIDLVLSGDTLLLIEGMDKAYVIATRLWPVRGVGEPESETTIKGSRDG FT FTETIRFNTALVRRRIKDTRLKIKSKTLGVRSKTDMAIIYIEDIVNQDVLNNIYDRLEK FT IDIDAILGSGYIEHLIEDGKWSLFPTTRSTERPDVVASALYEGKVAILVDNSPFAIIVP FT TTLPSLFQSPDDYYEKWIHSSIIRIIRLFSIIISIILPSMYVAVTSYHSDIIPTKLAYF FT IAASREGVPFPAYMEALIMEFSLAFLMESIIRLPKPIGATIGIVGGLIIGQAAVSAGIV FT SPIMIIIVSITTITSFTAPSYDASLSFRIIRFLLIIAASFLGLYGIILGLIVLLIHLVR FT LKSFGIPYLSPMVNPSISDFKDMYIRAPIRFFKKRPDYMKTRDKIRQR" FT misc_feature 159692..161185 FT /note="Pfam match to entry PF03323 FT GerA,Bacillus/Clostridium GerA spore germination protein, FT score 714.1, E-value 6.6e-212" FT /inference="protein motif:Pfam:PF03323" FT misc_feature order(160607..160675,160799..160858,160871..160939, FT 160982..161050) FT /note="4 probable transmembrane helices predicted for FT CBO0123 by TMHMM2.0 at aa 306-328, 370-389, 394-416 and FT 431-453" FT /inference="protein motif:TMHMM:2.0" FT CDS 161232..162329 FT /transl_table=11 FT /locus_tag="CBO0124" FT /product="spore germination protein" FT /note="Similar to Bacillus subtilis spore germination FT protein A2 GerAb or GerA2 or bsu33060 SWALL:GRAB_BACSU FT (SWALL:P07869) (365 aa) fasta scores: E(): 4.9e-24, 27.92 FT id in 351 aa, and to Clostridium tetani spore germination FT protein A2 ctc00286 SWALL:Q899A0 (EMBL:AE015936) (369 aa) FT fasta scores: E(): 1.3e-72, 50.13 38d in 363 aa" FT /db_xref="GOA:A5HY20" FT /db_xref="InterPro:IPR004761" FT /db_xref="UniProtKB/TrEMBL:A5HY20" FT /protein_id="CAL81679.1" FT /translation="MVRDENFVTSYSLFATIVTSVIGVSVFSYASDLANIVGNDGWIVI FT IISALINFGLIYIMYLIIKFNNYNEFYKIVNDNFGKYLGKIIVLSFIIYNVIYISNGLR FT VFVEEIKLYLLEKTPTEFLIIISVIVASYLIRGEVDTLVKFNEVVFWFSFIPVIFVLLF FT AFYQGDFTNLLPVLQNKPSSYITATWATINRFKGIEIIFLLLPFMKKKNKTSKILFNSL FT FFIGIFYILVVILSVTMFSTEQVKLMLWPGITMIKSIDIPGTFIERWEGIIMAIWTLFF FT FTTFTNIYYFSADILKDMLHIEDIKISSLFIMPFVYIIALYPENVVEVIDVGKNLMPIL FT FIINMVVIPIILFLISKSKLSKRKR" FT sig_peptide 161232..161319 FT /locus_tag="CBO0124" FT /note="probabilty 0.863, with cleavage site probability FT 0.642 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 161250..162218 FT /note="Pfam match to entry PF03845 Spore_permease, Spore FT germination protein, score 160.8, E-value 2.4e-45" FT /inference="protein motif:Pfam:PF03845" FT misc_feature order(161253..161321,161358..161426,161487..161555, FT 161583..161636,161673..161741,161784..161852, FT 161886..161954,162042..162110,162144..162197, FT 162240..162299) FT /note="10 probable transmembrane helices predicted for FT CBO0124 by TMHMM2.0 at aa 7-29, 42-64, 85-107, FT 117-134,147-169, 184-206, 218-240, 270-292, 304-321 and FT 336-355" FT /inference="protein motif:TMHMM:2.0" FT CDS 162379..163560 FT /transl_table=11 FT /locus_tag="CBO0125" FT /product="spore germination protein" FT /note="Similar to Bacillus cereus spore germination protein FT GerlC SWALL:Q93N68 (EMBL:AF387344) (390 aa) fasta scores: FT E(): 1.8e-14, 27.36 38d in 402 aa, and to Clostridium FT tetani spore germination protein A3 ctc00287 SWALL:Q898Z9 FT (EMBL:AE015936) (394 aa) fasta scores: E(): 1.6e-56, 37.72 FT 38d in 395 aa" FT /db_xref="GOA:A5HY21" FT /db_xref="InterPro:IPR008844" FT /db_xref="UniProtKB/TrEMBL:A5HY21" FT /protein_id="CAL81680.1" FT /translation="MKSKKCLAIILILSTICMTGCWDKIEINERAFASVLGVDAGKDIG FT KEKQLKEISESASFTGSKFDKIKVTYAFPDISKLGPEKGGTAVDNTMSVDAYSMQNSIN FT EVINKSSRTLSFGHLKLIVLNTSILDYSNTFKEVIDYLQRQPAINRTIYIVFSEDKSEE FT ILKFKPNMEKSIENYIIGILENNKKSNTSFPLTLNEFLEKTGQNNITLMPVINIDKENK FT DLKISKVAVIKNDKIKGYISTEQANSIQLINKRFKGGTRTIIRDGSPLDYSIENNERKI FT NIKDKKKLSVDIKLNLEGQIKGYNIDKQISSNEENIKKIESNLDKAITQDIKEVIRISQ FT TEYNTDILDLGEFIHKYHPKLWKEIKGDWNQLYKTVDINVSVDTKVRRIGGIK" FT sig_peptide 162379..162475 FT /locus_tag="CBO0125" FT /note="probabilty 0.904, with cleavage site probability FT 0.719 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 163054..163557 FT /note="Pfam match to entry PF05504 Spore_GerAC, Spore FT germination B3/ GerAC like, C-terminal, score 120.7,E-value FT 2.8e-33" FT /inference="protein motif:Pfam:PF05504" FT CDS 163633..164265 FT /transl_table=11 FT /locus_tag="CBO0126" FT /product="stage II sporulation protein" FT /note="Similar to Bacillus subtilis stage II sporulation FT protein R SpoIIR or Ipc-27d or bsu36970 SWALL:SP2R_BACSU FT (SWALL:P39151) (224 aa) fasta scores: E(): 1.9e-18, 35.71 FT id in 224 aa, and to Clostridium perfringens stage II FT sporulation protein R SpoIIR or cpe2211 SWALL:Q8XIB0 FT (EMBL:AP003193) (209 aa) fasta scores: E(): 1.5e-37,55.34 FT 38d in 206 aa" FT /db_xref="InterPro:IPR014202" FT /db_xref="UniProtKB/TrEMBL:A5HY22" FT /protein_id="CAL81681.1" FT /translation="MKKILVFMLSIIVVFFISFKSFNLFHKSTSVEQKDISNKIIRFHV FT LANSDSIEDQGLKLKVKDEIIKYMMPKLDKSSSIDESRKILKENDKEIKKIAENIINKN FT GYKYSVNTYLGQDQFPIKTYGNITLPQGKYEAYKIVIGNGQGQNWWCVMFPPLCFVDVT FT KGEVSTKKTEQKMKKVLKEEELKCINNSKNSYEIKFKVVEKINKLKR" FT sig_peptide 163633..163723 FT /locus_tag="CBO0126" FT /note="probabilty 0.963, with cleavage site probability FT 0.440 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT CDS complement(164302..165543) FT /transl_table=11 FT /locus_tag="CBO0127" FT /product="putative cell wall synthesis protein" FT /note="Similar to Clostridium tetani 1,2-diacylglycerol FT 3-glucosyltransferase ctc00289 SWALL:Q898Z7 (EMBL:AE015936) FT (389 aa) fasta scores: E(): 1.7e-81,59.38 38d in 389 aa, FT and to Clostridium acetobutylicum predicted FT udp-glucuronosyltransferase, ypfp b/subtilis ortholog FT cac2897 SWALL:Q97F56 (EMBL:AE007787) (384 aa) fasta scores: FT E(): 4.3e-80, 59.53 38d in 383 aa" FT /db_xref="GOA:A5HY23" FT /db_xref="InterPro:IPR007235" FT /db_xref="InterPro:IPR009695" FT /db_xref="UniProtKB/TrEMBL:A5HY23" FT /protein_id="CAL81682.1" FT /translation="MKILILSVSAGGGHIHAAEALKSYIKLNNNKAEITVIDTLKYINP FT LIDKVIIGSYLKTLKVTPSLFGKLYDHSEDDEGLATVISSNLSKIMTYKLSHLVNELNP FT DIIICTHPFPAEMISIMKDKGKLNIPSLTILTDYAPHSFWIQEHTDAYVVSNSDMIDEM FT VARNVPKNKIFDFGIPVNPSFLKKYDKEKTLKELDLNINIPTFLIMGGSLGIGKISDLY FT SELIKIDQNMQIIIITGNNKKLYSELNKLKENSNKETRIIGFTDKVNKYMQCCDLLLTK FT PGGLTITEALVSNIPMAVFSPIPGQEEKNAKFLLRHNLAISIDSIEDTKDIISDLLKSE FT SSLKTMSLNCNKFAKPNCGNDIYNLLEFLISIKKNDSSKNKMYVSNPVISHKSKNLFKS FT IEKYFIKTAEKFLL" FT CDS 165916..167286 FT /transl_table=11 FT /locus_tag="CBO0128" FT /product="sporulation protein" FT /note="Similar to Bacillus subtilis sporulation protein FT YpeB or JoeB or bsu22920 SWALL:YPEB_BACSU (SWALL:P38490) FT (450 aa) fasta scores: E(): 1e-27, 26.57 38d in 444 aa,and FT to Clostridium tetani conserved membrane-associated protein FT ctc00290 SWALL:Q898Z6 (EMBL:AE015936) (455 aa) fasta FT scores: E(): 2.7e-92, 57.54 38d in 457 aa" FT /db_xref="GOA:A5HY24" FT /db_xref="InterPro:IPR005075" FT /db_xref="InterPro:IPR014239" FT /db_xref="UniProtKB/TrEMBL:A5HY24" FT /protein_id="CAL81683.1" FT /translation="MKKSTRRIVYTLIVTLIVVFSSTFAILMTLERNDYRNYLQGEYSK FT SLHELITSVQNIRVNLSKASIIGSRDQEIVTFEEIFKYSSMANDKLHSLPIDQNTIANT FT SKFLSQVGDFSNSLGKSIVKNNNLSKKDYENIERLKKESLQLENQLNNVVTDINEGRVK FT WGDIRKKVGGVLAKENPNSVKGQFNNMQKQVMQYPALIYDGPFSDNTLKITPKVNSEKN FT ISESQAQKIAENIIGKDKIKAIKLDTNEGKTNIGTYRFIADIKGRDNKNGNVTCEISKH FT GGKLVYLIDSRSIGQPKIDSKKAKSIGNNYLKKLKISNMVPTYTLNYENVAVINYVYKQ FT DDVIVYPDQIKLKIALDTGEIIGVDSQKYLIAHHDRDINKNIKVSQKEAQKKVGKNLNI FT TNIRLSIIPTEANTEVLCYEFSGTYKNDKFKMFINANTGYEERILQILDTPNGELTI" FT sig_peptide 165916..166009 FT /locus_tag="CBO0128" FT /note="probabilty 0.995, with cleavage site probability FT 0.621 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT CDS 167389..168369 FT /transl_table=11 FT /locus_tag="CBO0129" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00292 SWALL:Q898Z4 (EMBL:AE015936) (326 aa) fasta FT scores: E(): 7.2e-89, 71.77 38d in 326 aa, and to FT Clostridium perfringens hypothetical protein Cpe2210 FT cpe2210 SWALL:Q8XIB1 (EMBL:AP003193) (326 aa) fasta scores: FT E(): 1.1e-78, 67.79 38d in 326 aa" FT /db_xref="GOA:A5HY25" FT /db_xref="InterPro:IPR004506" FT /db_xref="InterPro:IPR008532" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020536" FT /db_xref="UniProtKB/TrEMBL:A5HY25" FT /protein_id="CAL81684.1" FT /translation="MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAER FT MTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNPCIDCHAMMMKYSGELLKKFNADFI FT ITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLLNI FT SGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYG FT RHFRISENCKIISTRTKEEGDIIKNYLDSKDYMLLACDYNGSTVIIIGEPNKDDIKLAA FT EITGRYSKGKDEDEIKVKYGKVNTDLNNIIKVKPASDDYLKKFII" FT misc_feature 167629..167646 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT /inference="protein motif:ProSite:PS00190" FT CDS 168394..168822 FT /transl_table=11 FT /locus_tag="CBO0130" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00293 SWALL:Q898Z3 (EMBL:AE015936) (143 aa) fasta FT scores: E(): 1.5e-24, 54.22 38d in 142 aa, and to FT Clostridium acetobutylicum uncharacterized protein, ywib FT b.subtilis homolog cac2894 SWALL:Q97F59 (EMBL:AE007787) FT (137 aa) fasta scores: E(): 1.7e-20, 52.55 38d in 137 aa" FT /db_xref="InterPro:IPR011038" FT /db_xref="InterPro:IPR015231" FT /db_xref="UniProtKB/TrEMBL:A5HY26" FT /protein_id="CAL81685.1" FT /translation="MKKKALIHVLSSIPDVKEKDDSIEVVTPGNFYKKDKNYYAVYEET FT AISGMEGTTTTLKIGEKNFSLIRMGNTSTKMDFTLNKKSMSMYSTPYGTLEININTKKL FT DINIDDNGGSIYIDYILGVEGQKPQNTILSINISPEKK" FT CDS 168954..169253 FT /transl_table=11 FT /locus_tag="CBO0131" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani hypothetical protein FT ctc00294 SWALL:Q898Z2 (EMBL:AE015936) (113 aa) fasta FT scores: E(): 3.3e-15, 49 38d in 100 aa, and to Clostridium FT acetobutylicum hypothetical protein Cac2893 SWALL:Q97F60 FT (EMBL:AE007787) (95 aa) fasta scores: E(): 1.9e-09, 36.66 FT id in 90 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY27" FT /protein_id="CAL81686.1" FT /translation="MNYFTNSKYENIIKLLCKYKGLSEYEIIKIMGDNECRYLLFLLLR FT KYNCIEIENLKKDFNINDYEGICNNIEEAEKKLLLNKKIRDMFFEAGEILDNIK" FT CDS 169487..171088 FT /transl_table=11 FT /gene="pyrG" FT /locus_tag="CBO0132" FT /product="CTP synthase" FT /EC_number="6.3.4.2" FT /note="Similar to Lactococcus lactis CTP synthase PyrG FT SWALL:PYRG_LACLC (SWALL:O87761) (535 aa) fasta scores: E(): FT 1.1e-123, 59.39 38d in 532 aa, and to Clostridium FT acetobutylicum CTP synthase PyrG or cac2892 FT SWALL:PYRG_CLOAB (SWALL:Q97F61) (535 aa) fasta scores: E(): FT 3.9e-165, 79.88 38d in 527 aa" FT /db_xref="GOA:A5HY28" FT /db_xref="InterPro:IPR004468" FT /db_xref="InterPro:IPR017456" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:A5HY28" FT /protein_id="CAL81687.1" FT /translation="MSTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVSIQKFDPYI FT NIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDENLSQNNNVTTGKIYWSVISKER FT KGDYLGATVQVIPHITTEIKSRVYRVAKEKEVDVVITEIGGTIGDIESLPFLESIRQIK FT YEVGRENVCFIHVTLLPFLGKAGELKTKPTQHSVKELRGIGIQPDIIVCRSEKQIPEEL FT KGKIGLFCNVDKEDVIQNLDAENLYEVPLMLHKENLDTLVCKKLGLNYSKIDNTEWISM FT VNNAKNLSKNTTIALVGKYVELHDAYISIVEALNHGGYANDTKVNIKWINSEEVNENNF FT EQYLKDVDGILVPGGFGDRGIEGKIWAAKWARENKIPFLGICLGMQCAVIEFARNVLNY FT KGAHSAEIDPNTKYPVIDLMPEQKDIDNMGGTMRLGAYPCKLLKGTNSEKAYGQEIVYE FT RHRHRYEFNNEYRSKLTEAGLILSGTSPDDRLVEIVEINNHPWYVAVQFHPELKSRPNK FT PHPLFKDFVKATLDKK" FT misc_feature 170390..171070 FT /note="Pfam match to entry PF00117 GATase, Glutamine FT amidotransferase class-I, score 280.0, E-value 3.3e-81" FT /inference="protein motif:Pfam:PF00117" FT misc_feature 170615..170650 FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT /inference="protein motif:ProSite:PS00442" FT repeat_region 171176..171363 FT /note="intergenic repeat 1" FT CDS 171527..171880 FT /transl_table=11 FT /locus_tag="CBO0133" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani hypothetical protein FT ctc00295 SWALL:Q898Z1 (EMBL:AE015936) (120 aa) fasta FT scores: E(): 3.3e-08, 32.45 38d in 114 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY29" FT /protein_id="CAL81688.1" FT /translation="MGPMIIQTELGIAIKNTFGKYELIDFSLFNTSKINEYELGLTINK FT SNKGSITITAKCHICNNIHKYNYNIDEFLKREIIVGGCEILGIPLFYIGNKSTIEERVY FT KQNQIFDKIYMMV" FT CDS 172052..173497 FT /transl_table=11 FT /gene="rho" FT /locus_tag="CBO0134" FT /product="transcription termination factor Rho" FT /note="Similar to Bacillus subtilis transcription FT termination factor Rho or bsu37080 SWALL:RHO_BACSU FT (SWALL:Q03222) (427 aa) fasta scores: E(): 4.3e-71, 56.89 FT id in 406 aa, and to Clostridium tetani transcription FT termination factor Rho ctc00296 SWALL:Q898Z0 FT (EMBL:AE015936) (499 aa) fasta scores: E(): 2.9e-119,74.38 FT 38d in 488 aa" FT /db_xref="GOA:A5HY30" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004665" FT /db_xref="InterPro:IPR011112" FT /db_xref="InterPro:IPR011113" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:A5HY30" FT /protein_id="CAL81689.1" FT /translation="MINKDYESMTVKELREIAKKLDIKNISKFKKNELIEEIKTSKSTA FT IEKDGKILVEKISPKIIKSENNIHSKITKENGINEEKTSSLMKNNEENKAERLKEMINE FT SQRAKGVLEIIENNNYGFLRGQNYLSGPEDIYISPSQIRRFNLRTGDEVEGKVRIPKDG FT EKFKALIYVERVNGENPEKAVGRKPFESLVPIYPNERIKLETNSQDLSTRLMDIISPIG FT KGQRGMIVAPPKAGKTTLLKKIAQSISRNNPLCKLIVLLIDERPEEVTDMQRSIKGEVI FT YSTFDEEPEHHTKVTYMVLERAKRMVEQGQDVVILLDSITRLSRAYNLTITPTGRTLSG FT GLDPGALVMPKKFFGAARNIENGGSLTILATALTETGSRMDDMIFEEFKGTGNMEVHLN FT RKLQERRIFPALDIYKSGTRRDDLLFTDSLEKETAFNIRKLLYEENNVENVTEQVLSIL FT SKTKTNEEFVNIISKMDMNKNNR" FT misc_feature 172742..172765 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 172811..173323 FT /note="Pfam match to entry PF00006 ATP-synt_ab, ATP FT synthase alpha/beta family, nucleotide-binding domain,score FT 106.3, E-value 6.2e-29" FT /inference="protein motif:Pfam:PF00006" FT CDS complement(173537..173755) FT /transl_table=11 FT /gene="rpmE" FT /locus_tag="CBO0135" FT /product="50S ribosomal protein L31" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 50S ribosomal protein L31 RpmE or b3936 or z5484 or FT ecs4863 SWALL:RL31_ECOLI (SWALL:P02432) (70 aa) fasta FT scores: E(): 6.4e-12, 50.74 38d in 67 aa, and to FT Clostridium perfringens 50S ribosomal protein L31 RpmE or FT cpe2205 SWALL:RL31_CLOPE (SWALL:Q8XIB6) (68 aa) fasta FT scores: E(): 5.7e-23, 85.07 38d in 67 aa" FT /db_xref="GOA:A5HY31" FT /db_xref="InterPro:IPR002150" FT /db_xref="UniProtKB/Swiss-Prot:A5HY31" FT /protein_id="CAL81690.1" FT /translation="MREGIHPEYNHDVVVKCACGNTFTTGSTNKELKVEICSKCHPFFT FT GKQKIVDAGGRVDKFMKKFNLSNEDVK" FT misc_feature complement(173555..173755) FT /note="Pfam match to entry PF01197 Ribosomal_L31,Ribosomal FT protein L31, score 144.8, E-value 1.6e-40" FT /inference="protein motif:Pfam:PF01197" FT misc_feature complement(173579..173635) FT /note="PS01143 Ribosomal protein L31 signature." FT /inference="protein motif:ProSite:PS01143" FT misc_feature complement(173630..173647) FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT /inference="protein motif:ProSite:PS00190" FT CDS 173982..174557 FT /transl_table=11 FT /gene="tdK" FT /locus_tag="CBO0136" FT /product="thymidine kinase" FT /EC_number="2.7.1.21" FT /note="Similar to Rhodothermus sp. thymidine kinase Tdk FT SWALL:KITH_RHOSI (SWALL:Q9ZIG2) (213 aa) fasta scores: E(): FT 2.6e-34, 53.26 38d in 184 aa, and to Clostridium FT acetobutylicum thymidine kinase cac2887 SWALL:Q97F65 FT (EMBL:AE007786) (195 aa) fasta scores: E(): 5.1e-56,77.48 FT 38d in 191 aa" FT /db_xref="GOA:A5HY32" FT /db_xref="InterPro:IPR001267" FT /db_xref="InterPro:IPR020633" FT /db_xref="InterPro:IPR020634" FT /db_xref="UniProtKB/Swiss-Prot:A5HY32" FT /protein_id="CAL81691.1" FT /translation="MYGPKDHGWIEVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPE FT IDNRYSKQDVVSHAGDKIQSVPVKSSKEILEKLLDDTDVIGIDEAQFFDDFLVEIVSKI FT ANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKIQAVCMVCNNPATRTQRLINGKP FT AKKSDPVVLIGAQESYEARCRKCHRVPR" FT misc_feature 174003..174542 FT /note="Pfam match to entry PF00265 TK, Thymidine FT kinase,score 291.8, E-value 8.6e-85" FT /inference="protein motif:Pfam:PF00265" FT misc_feature 174024..174047 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 174501..174542 FT /note="PS00603 Thymidine kinase cellular-type signature." FT /inference="protein motif:ProSite:PS00603" FT misc_feature 174528..174545 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT /inference="protein motif:ProSite:PS00190" FT CDS 174574..175491 FT /transl_table=11 FT /locus_tag="CBO0137" FT /product="uputative membrane protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved protein, predicted FT metal-dependent enzyme, yqhq b.subtilis ortholog cac2886 FT SWALL:Q97F66 (EMBL:AE007786) (317 aa) fasta scores: E(): FT 6.8e-73, 60.39 38d in 308 aa, and to Clostridium tetani FT conserved protein ctc00300 SWALL:Q898Y7 (EMBL:AE015936) FT (249 aa) fasta scores: E(): 2.2e-65, 67.33 38d in 248 aa" FT /db_xref="InterPro:IPR010787" FT /db_xref="UniProtKB/TrEMBL:A5HY33" FT /protein_id="CAL81692.1" FT /translation="MGKSTNVGGQAVLEGVMMRGKNGIATAVRKTNGEVIVNKESYTPY FT TKKSFFFSLPIIRGFVSLIESLVIGIQTLNYSASFFEEQVEESKFDKWFNRTFKDKADN FT ILIGITLLISFIISAVVFFIFPTFIANFFKKIYIQNTLLLNIIEGIIRIAIFLLYILLI FT SNMEDIKRVFQYHGAEHKTIFCYENHMDLIPENAIKFTRFHPRCGTNFLFLVMIVSILL FT FSLTGWNNIWQRILYRIILLPVVSGVTYEIIKWLGKSNSNFAKIIAYPGLMLQKLTTKE FT PDLRQLEVAIMALKAAEGIESSME" FT misc_feature order(174718..174786,174892..174960,174994..175062, FT 175201..175269) FT /note="4 probable transmembrane helices predicted for FT CBO0137 by TMHMM2.0 at aa 49-71, 107-129, 141-163 and FT 210-232" FT /inference="protein motif:TMHMM:2.0" FT CDS 175499..176350 FT /transl_table=11 FT /locus_tag="CBO0138" FT /product="protein methyltransferase" FT /EC_number="2.1.1.-" FT /note="Similar to Escherichia coli, and Shigella flexneri FT protein methyltransferase HemK or b1212 or sf1215 or s1299 FT SWALL:HEMK_ECOLI (SWALL:P37186) (277 aa) fasta scores: E(): FT 2.3e-16, 30.88 38d in 259 aa, and to Clostridium tetani FT methyltransferase ctc00301 SWALL:Q898Y6 (EMBL:AE015936) FT (292 aa) fasta scores: E(): 1.1e-58,58.69 38d in 276 aa" FT /db_xref="GOA:A5HY34" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR002296" FT /db_xref="InterPro:IPR004556" FT /db_xref="InterPro:IPR007848" FT /db_xref="InterPro:IPR019874" FT /db_xref="UniProtKB/Swiss-Prot:A5HY34" FT /protein_id="CAL81693.1" FT /translation="MILKDLLIEGYGVLKKASIGSYQIDAQLLLGKVLKKDRLFILTNP FT DYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLNFNIKKGVLIPRPDTEILVETV FT LEEIKNKNYKQICDVCCGSGIIGITIGYTLNNTEIICYDIEDIPYNTTKENILKHNLQD FT RVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIETLMDDVKKYEPFEALCGGKDGLF FT FYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEYGFKDVLCIKDLAGKDRVIKAR FT KY" FT misc_feature 176054..176074 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 176432..177508 FT /transl_table=11 FT /gene="prfA" FT /locus_tag="CBO0139" FT /product="peptide chain release factor 1" FT /note="Similar to Escherichia coli, Escherichia coli FT O6,Escherichia coli O157:H7, and Shigella flexneri peptide FT chain release factor 1 SWALL:RF1_ECOLI (SWALL:P07011) (360 FT aa) fasta scores: E(): 1.5e-63, 50.98 38d in 355 aa, and to FT Clostridium tetani peptide chain release factor 1 prfa or FT ctc00302 SWALL:RF1_CLOTE (SWALL:Q898Y5) (355 aa) fasta FT scores: E(): 9.1e-101, 78.53 38d in 354 aa" FT /db_xref="GOA:A5HY35" FT /db_xref="InterPro:IPR000352" FT /db_xref="InterPro:IPR004373" FT /db_xref="InterPro:IPR005139" FT /db_xref="UniProtKB/Swiss-Prot:A5HY35" FT /protein_id="CAL81694.1" FT /translation="MLERLNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIV FT NTYREYKKAQEDLESDKEMLKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDP FT NDDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTV FT AVKGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRI FT DVYRASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE FT AERAASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDGDIDEAIE FT ALVTEDQAEKMKDLGRVN" FT misc_feature 176618..176962 FT /note="Pfam match to entry PF03462 PCRF, PCRF domain,score FT 243.9, E-value 2.4e-70" FT /inference="protein motif:Pfam:PF03462" FT misc_feature 177053..177388 FT /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA FT hydrolase domain, score 263.4, E-value 3.2e-76" FT /inference="protein motif:Pfam:PF00472" FT misc_feature 177107..177157 FT /note="PS00745 Prokaryotic-type class I peptide chain FT release factors signature." FT /inference="protein motif:ProSite:PS00745" FT CDS 177536..178144 FT /transl_table=11 FT /locus_tag="CBO0140" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani hypothetical membrane FT protein ctc00303 SWALL:Q898Y4 (EMBL:AE015936) (200 aa) FT fasta scores: E(): 1.4e-28, 46.19 38d in 197 aa, and to FT Clostridium acetobutylicum predicted membrane protein FT cac2883 SWALL:Q97F69 (EMBL:AE007785) (192 aa) fasta scores: FT E(): 1.2e-26, 40.1 38d in 197 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY36" FT /protein_id="CAL81695.1" FT /translation="MDLNKGRRNQKRSYERFVVIMSFIFILLPLFLYLYNKIYDIFYVS FT YLIIIEILIVMAIIIRTDKEKLKFQYSNNRLKIVLGIMNRKLNIVCDKVVLVHIEQYNN FT IYDVEDFRIILLTTSKFRNNKIIKVNEKFLKLHDYAANFYYKLKKIDPEKDFYYTIIKR FT GGLKKYYLLDTLYRTCVYAHFTEECIEKIKELRKEMEID" FT misc_feature order(177572..177640,177656..177715) FT /note="2 probable transmembrane helices predicted for FT CBO0140 by TMHMM2.0 at aa 13-35 and 41-60" FT /inference="protein motif:TMHMM:2.0" FT CDS 178204..178923 FT /transl_table=11 FT /locus_tag="CBO0141" FT /product="putative zinc transporter" FT /note="Similar to Escherichia coli, Escherichia coli O6,and FT Escherichia coli O157:H7 zinc transporter ZupTt or b3040 or FT c3789 or z4397 or ecs3928 SWALL:ZUPT_ECOLI (SWALL:P24198) FT (257 aa) fasta scores: E(): 3.9e-08, 27.53 id in 247 aa, FT and to Clostridium tetani zinc uptake transporter ctc00304 FT SWALL:Q898Y3 (EMBL:AE015936) (236 aa) fasta scores: E(): FT 8.5e-49, 53.81 38d in 236 aa" FT /db_xref="GOA:A5HY37" FT /db_xref="InterPro:IPR003689" FT /db_xref="UniProtKB/TrEMBL:A5HY37" FT /protein_id="CAL81696.1" FT /translation="MSKLLFIIVMGTIISLSGTMIGAIIGISLKDPSEKLLCKFMGFSA FT GLMLSIVVFDLIPEALNSWDFYGVLIFLILGMLIVYFIDKNTNSIDINMHKKVAFMTAL FT GLILHNFPEGILMGVGFQAGNRLGLKMAIIISIHDIPEGIAVATPLIASNEKKSKTLFY FT VFLTAIPTLFGVFLGSYVATISKNFLSILLALASGIMLYVVCAEMIPESRNLGDKLTSY FT FYMIVGIIAGLVIIKLL" FT sig_peptide 178204..178270 FT /locus_tag="CBO0141" FT /note="probabilty 0.991, with cleavage site probability FT 0.476 between residues 23 and 24" FT /inference="protein motif:SignalP:2.0" FT misc_feature 178204..178911 FT /note="Pfam match to entry PF02535 Zip, ZIP Zinc FT transporter, score 75.3, E-value 1.3e-19" FT /inference="protein motif:Pfam:PF02535" FT misc_feature order(178216..178284,178327..178386,178399..178452, FT 178495..178563,178687..178755,178765..178821, FT 178858..178911) FT /note="7 probable transmembrane helices predicted for FT CBO0141 by TMHMM2.0 at aa 5-27, 42-61, 66-83, FT 98-120,162-184, 188-206 and 219-236" FT /inference="protein motif:TMHMM:2.0" FT CDS 178944..179999 FT /transl_table=11 FT /locus_tag="CBO0142" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum predicted FT translation factor cac2882 SWALL:Q97F70 (EMBL:AE007785) FT (350 aa) fasta scores: E(): 3.6e-85, 68.57 38d in 350 FT aa,and to Clostridium tetani sua5 protein ctc00305 FT SWALL:Q898Y2 (EMBL:AE015936) (350 aa) fasta scores: E(): FT 5.9e-83, 66.28 38d in 350 aa" FT /db_xref="InterPro:IPR004388" FT /db_xref="InterPro:IPR005145" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR010923" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:A5HY38" FT /protein_id="CAL81697.1" FT /translation="MKTKVMRLDENNIDEHVISEAGDILRQGGLVVFPTETVYGLGANA FT LDKNAVKGIFQAKGRPQDNPLIVHISKMKDIEKLVQKIPSVAEKLMDKFWPGPMTIILK FT KKDIIPNETSAGLDSIGIRMPSNKIAMKLISMAGVPIAAPSANLSGKPSPTDVETCIED FT LDGKVNIILGGDNSEVGVESTVIDCTINPPCILRPGGITLEMVKEVDSNIYIDPAIMKK FT PDKDLKPKAPGMKYRHYAPKAPLKIIKGDLNKTIEKINEMVQNYIDAEKKVGIIATDET FT IDNYRKGDVVSIGSRKDLNTIAHNLFYVLRSFDEKNVDLILSEAFEEKDMGVAIMNRLK FT KSAGYDIINLD" FT misc_feature 179010..179540 FT /note="Pfam match to entry PF01300 Sua5_yciO_yrdC, yrdC FT domain, score 230.4, E-value 2.8e-66" FT /inference="protein motif:Pfam:PF01300" FT misc_feature 179031..179069 FT /note="PS01147 SUA5/yciO/yrdC family signature." FT /inference="protein motif:ProSite:PS01147" FT misc_feature 179544..179987 FT /note="Pfam match to entry PF03481 SUA5, SUA5 domain,score FT 204.2, E-value 2e-58" FT /inference="protein motif:Pfam:PF03481" FT CDS 180008..180460 FT /transl_table=11 FT /locus_tag="CBO0143" FT /product="low molecular weight FT protein-tyrosine-phosphatase" FT /EC_number="3.1.3.48" FT /note="Similar to Acinetobacter johnsonii low molecular FT weight protein-tyrosine-phosphatase Ptp SWALL:PTP_ACIJO FT (SWALL:O52787) (142 aa) fasta scores: E(): 4.2e-06, 33.59 FT id in 128 aa, and to Clostridium tetani phosphotyrosine FT protein phosphatase ctc00306 SWALL:Q898Y1 (EMBL:AE015936) FT (154 aa) fasta scores: E(): 1.9e-24, 54.05 38d in 148 aa" FT /db_xref="GOA:A5HY39" FT /db_xref="InterPro:IPR000106" FT /db_xref="InterPro:IPR017867" FT /db_xref="InterPro:IPR023485" FT /db_xref="UniProtKB/TrEMBL:A5HY39" FT /protein_id="CAL81698.1" FT /translation="MNILFVCTGNTCRSFMAEAIFNSLNNMEELTAKSAGIAVVPGSVS FT SSNACKIINEDINVDLSNREAIQLDEEILDQSDLILTMTYSAKDLLSNLSLEDSDRIFC FT ITEYVGQKGEILDPFGGDIEVYKNTYEQLKNIILLLLKKLKEDRQN" FT misc_feature 180008..180436 FT /note="Pfam match to entry PF01451 LMWPc, Low molecular FT weight phosphotyrosine protein phosphatase, score FT 85.8,E-value 9.3e-23" FT /inference="protein motif:Pfam:PF01451" FT CDS 180520..180957 FT /transl_table=11 FT /gene="rpiB" FT /locus_tag="CBO0144" FT /product="ribose 5-phosphate isomerase" FT /EC_number="5.3.1.6" FT /note="Similar to Escherichia coli ribose 5-phosphate FT isomerase B RpiB or b4090 SWALL:RPIB_ECOLI (SWALL:P37351) FT (149 aa) fasta scores: E(): 2.2e-27, 52.77 38d in 144 FT aa,and to Clostridium tetani ribose 5-phosphate isomerase FT ctc00307 SWALL:Q898Y0 (EMBL:AE015936) (149 aa) fasta FT scores: E(): 1.5e-43, 78.47 38d in 144 aa" FT /db_xref="GOA:A5HY40" FT /db_xref="InterPro:IPR003500" FT /db_xref="InterPro:IPR004785" FT /db_xref="UniProtKB/TrEMBL:A5HY40" FT /protein_id="CAL81699.1" FT /translation="MKIALGSDHAGLPLKNEIIKHLEGKGIEIKDFGTYTEESCDYPDY FT AQKVAEKVVAKEFDFGILVCGTGIGISIAANKVKGVRAALCSDTFSAHACREHNNANIL FT ALGQRVVGVGLALDIVDNFLNAEFQGGRHENRINKMMRIEK" FT misc_feature 180700..180942 FT /note="Pfam match to entry PF02502 FT LacAB_rpiB,Ribose/Galactose Isomerase, score 170.3, E-value FT 3.3e-48" FT /inference="protein motif:Pfam:PF02502" FT CDS 180987..181616 FT /transl_table=11 FT /gene="upp" FT /locus_tag="CBO0145" FT /product="uracil phosphoribosyltransferase" FT /EC_number="2.4.2.9" FT /note="Similar to Bacillus subtilis uracil FT phosphoribosyltransferase Upp or Ipc-35D or bsu36890 FT SWALL:UPP_BACSU (SWALL:P39149) (209 aa) fasta scores: E(): FT 5.6e-53, 68.9 38d in 209 aa, and to Clostridium tetani FT uracil phosphoribosyltransferase Upp or ctc00308 FT SWALL:UPP_CLOTE (SWALL:Q898X9) (209 aa) fasta scores: E(): FT 8.6e-66, 86.12 38d in 209 aa" FT /db_xref="GOA:A5HY41" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR005765" FT /db_xref="UniProtKB/Swiss-Prot:A5HY41" FT /protein_id="CAL81700.1" FT /translation="MSKVTQIAHPLILHKLALIRDKNTGSKDFRELVEEVAMLMAYEVT FT RDLQLKEVEIETPICKTKCKMLSGKKVAIVPILRAGLGMVGGMTSLIPAAKVGHIGLYR FT DEETLKPVEYFCKLPQDIGDRDVIVTDPMLATGGSAKDAITLLKQKGAKHIRLMCLVAA FT PEGIKEVMDEHPDVDIYVASVDEKLNEKGYVVPGLGDAGDRLYGTK" FT misc_feature 181062..181535 FT /note="Pfam match to entry PF00156 FT Pribosyltran,Phosphoribosyl transferase domain, score 46.3, FT E-value 7.3e-11" FT /inference="protein motif:Pfam:PF00156" FT repeat_region 181944..181980 FT /rpt_family="CB.598" FT /rpt_type=DIRECT FT /rpt_unit_seq="tatttttatagctatctatcgaccaaaagtatttctt" FT /inference="ab initio prediction:REPuter" FT CDS 182123..182611 FT /transl_table=11 FT /locus_tag="CBO0146" FT /product="putative zinc-binding protein" FT /note="Similar to Clostridium tetani comE operon protein 2 FT ctc00309 SWALL:Q898X8 (EMBL:AE015936) (162 aa) fasta FT scores: E(): 6.7e-56, 81.48 38d in 162 aa, and to FT Clostridium acetobutylicum deoxycytidylate deaminase FT cac2876 SWALL:Q97F76 (EMBL:AE007785) (162 aa) fasta scores: FT E(): 1.9e-44, 67.28 38d in 162 aa" FT /db_xref="GOA:A5HY42" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR015517" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="InterPro:IPR016473" FT /db_xref="UniProtKB/TrEMBL:A5HY42" FT /protein_id="CAL81701.1" FT /translation="MDRIDKNNYYLDICETVLERGTCLRRNFAAIIVKNDEIMATGYTG FT APRGRKNCCDLGYCKREELKVPRGTRYELCRSVHAEQNAIISARRQDMIASTMYLVGKE FT YSTGKYVVNTAPCSLCKRFIINSGIDKVVIRDSKEKFRIIQVEEWIENDDSLNGDGSY" FT misc_feature 182135..182530 FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT 69.6, E-value 6.9e-18" FT /inference="protein motif:Pfam:PF00383" FT misc_feature 182357..182494 FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT /inference="protein motif:ProSite:PS00903" FT CDS 182719..183753 FT /transl_table=11 FT /gene="tagO" FT /locus_tag="CBO0147" FT /product="probable undecaprenyl-phosphate FT N-acetylglucosaminyl 1-phosphate transferase" FT /EC_number="2.7.8.-" FT /note="Similar to Bacillus subtilis probable FT undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate FT transferase tago or bsu35530 SWALL:TAGO_BACSU FT (SWALL:O34753) (358 aa) fasta scores: E(): 7.2e-47, 41.32 FT id in 346 aa, and to Clostridium tetani putative FT undecaprenyl-phosphate FT alpha-N-acetylglucosaminyltransferase ctc00310 SWALL:Q898X7 FT (EMBL:AE015936) (353 aa) fasta scores: E(): 9e-86, 67.85 FT 38d in 336 aa" FT /db_xref="GOA:A5HY43" FT /db_xref="InterPro:IPR000715" FT /db_xref="InterPro:IPR018480" FT /db_xref="UniProtKB/TrEMBL:A5HY43" FT /protein_id="CAL81702.1" FT /translation="MDTKLYIIGAITAIVLSVILTPIVKKAAFILGVVDIPKDKRKIHK FT KPIPLLGGIAIYISFVVALILKKGPLTLEEIGIILGSTVIVIGGFIDDKYDMSPIKKIL FT FQLAAAICLIICGLKIQFITNPFDHLNLYVGLHIFAIPITIVWVIGITNALNLIDGLDG FT LAAGVALISCITMFVIAVLNQRWEAAILTSILGGSILGFLPYNFNPASIFMGDTGSQLL FT GFLLAAISIEGAIKSATAFAIVVPILALGLPIYDTLFAMIRRKINGKPIMQADRGHLHH FT RLLDMGLTQRQAVIIMYLISAVLGSFAIIAMQISNQKSYFLLTAIMLALILIAWKCGFF FT SHKE" FT sig_peptide 182719..182794 FT /gene="tagO" FT /locus_tag="CBO0147" FT /note="probabilty 0.632, with cleavage site probability FT 0.588 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(182731..182790,182857..182916,182929..182997, FT 183025..183084,183103..183171,183199..183267, FT 183286..183354,183436..183504,183595..183663, FT 183676..183744) FT /note="10 probable transmembrane helices predicted for FT CBO0147 by TMHMM2.0 at aa 5-24, 47-66, 71-93, FT 103-122,129-151, 161-183, 190-212, 240-262, 293-315 and FT 320-342" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 182941..183435 FT /note="Pfam match to entry PF00953 Glycos_transf_4,Glycosyl FT transferase, score 155.9, E-value 7.4e-44" FT /inference="protein motif:Pfam:PF00953" FT CDS 183767..184924 FT /transl_table=11 FT /gene="mnaA" FT /locus_tag="CBO0148" FT /product="udp-N-acetylglucosamine 2-epimerase" FT /EC_number="5.1.3.14" FT /note="Similar to Bacillus subtilis udp-N-acetylglucosamine FT 2-epimerase MnaA or bsu35660 SWALL:MNAA_BACSU FT (SWALL:P39131) (380 aa) fasta scores: E(): 7.6e-76, 56.69 FT 38d in 381 aa, and to Clostridium perfringens FT udp-N-acetylglucosamine 2-epimerase cpe2196 SWALL:Q8XIC5 FT (EMBL:AP003193) (384 aa) fasta scores: E(): 2.5e-107, 77.16 FT 38d in 381 aa" FT /db_xref="GOA:A5HY44" FT /db_xref="InterPro:IPR003331" FT /db_xref="UniProtKB/TrEMBL:A5HY44" FT /protein_id="CAL81703.1" FT /translation="MDKIKTITIFGTRPEAIKMAPLVKELEKREEIENRVCVTAQHREM FT LDQVLELFNIKPDFDLNIMKSKQSLTGITTRVLEGLEEIFDKEKPNLILVHGDTTTTFA FT GALAGFYKQIKVGHVEAGLRTFDKYFPFPEEMNRKLTGSIADLNFAPTVGSKNNLLREA FT IDEESIFVTGNTVIDAMEFTIEQDYIFENEDLNMIDYENKKVIMVTAHRRENWGEGIEN FT ICNALKTIVEKYKDVEIVYLVHLNPVVRDTVYSILGDLERVHLLDPLDTKETHNLMNKC FT YMLMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVKVGTVRLVGTDKEVITKEVFDLIEN FT KQKYDIMSKAINPYGDGKASIRIVDSILYYFDKIEKRPQEFHANK" FT misc_feature 183836..184870 FT /note="Pfam match to entry PF02350 FT Epimerase_2,UDP-N-acetylglucosamine 2-epimerase, score FT 561.1, E-value 7.6e-166" FT /inference="protein motif:Pfam:PF02350" FT CDS 185416..185784 FT /transl_table=11 FT /locus_tag="CBO0149" FT /product="putative subunit of ATP synthase protein" FT /note="Similar to Anabaena sp. ATP synthase protein I AtpI FT or Atp1 or all0011 SWALL:ATPZ_ANASP (SWALL:P12403) (122 aa) FT fasta scores: E(): 0.95, 21.42 38d in 112 aa, and to FT Clostridium pasteurianum ATP synthase subunit I AtpI FT SWALL:Q93Q51 (EMBL:AF283808) (123 aa) fasta scores: E(): FT 2.7e-07, 32.77 38d in 119 aa" FT /db_xref="InterPro:IPR005598" FT /db_xref="UniProtKB/TrEMBL:A5HY45" FT /protein_id="CAL81704.1" FT /translation="MIKEIKEMISRITIFNFIIGITFFIIIYLTFNISYSFCFLLGLIL FT ANINLFINAKTTNMIIIKNKNSILSILGFFVRIIIVCALGLLLSKDNTKNIIPFLLGYS FT SNFISIIFYGTNLGKNKV" FT misc_feature order(185449..185508,185518..185577,185614..185682, FT 185710..185769) FT /note="4 probable transmembrane helices predicted for FT CBO0149 by TMHMM2.0 at aa 12-31, 35-54, 67-89 and 99-118" FT /inference="protein motif:TMHMM:2.0" FT CDS 185799..186479 FT /transl_table=11 FT /gene="atpA" FT /gene_synonym="atpB" FT /locus_tag="CBO0150" FT /product="ATP synthase A chain" FT /EC_number="3.6.3.14" FT /note="Similar to Clostridium acetobutylicum ATP synthase A FT chain AtpB or AtpA or cac2871 SWALL:ATP6_CLOAB FT (SWALL:O05097) (221 aa) fasta scores: E(): 1.9e-37, 44.54 FT id in 220 aa, and to Clostridium perfringens ATP synthase A FT chain AtpI or cpe2193 SWALL:Q8XIC8 (EMBL:AP003193) (224 aa) FT fasta scores: E(): 6.4e-45, 51.32 38d in 226 aa" FT /db_xref="GOA:A5HY46" FT /db_xref="InterPro:IPR000568" FT /db_xref="InterPro:IPR023011" FT /db_xref="UniProtKB/TrEMBL:A5HY46" FT /protein_id="CAL81705.1" FT /translation="MEKFSPLFYINLFGYKFGITSSLVIQWVIIAIVALLSIILTRNLK FT KVPDKRQTVMEMMLDLVRNLVNENMGEEFKSFIPFIGTLMIYLLLMNLVGLLGLKPPTL FT DYSVVLGMALISFVVIQGYAIRKTGLKSYFLGYGKPYLFLLPLNVIERVMLPVSLSLRL FT FGNITAAVLIMDLVYSALASISWFAQLVVPIPLHIYFDLFDGTIQMVIFVMLTMINIKV FT IAEH" FT misc_feature order(185847..185915,186027..186095,186114..186173, FT 186216..186284,186303..186371,186414..186467) FT /note="6 probable transmembrane helices predicted for FT CBO0150 by TMHMM2.0 at aa 17-39, 77-99, 106-125, FT 140-162,169-191 and 206-223" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 186018..186464 FT /note="Pfam match to entry PF00119 ATP-synt_A, ATP synthase FT A chain, score 75.1, E-value 1.5e-19" FT /inference="protein motif:Pfam:PF00119" FT misc_feature 186270..186299 FT /note="PS00449 ATP synthase a subunit signature." FT /inference="protein motif:ProSite:PS00449" FT CDS 186519..186758 FT /transl_table=11 FT /gene="atpC" FT /gene_synonym="atpE" FT /locus_tag="CBO0151" FT /product="ATP synthase c chain" FT /EC_number="3.6.3.14" FT /note="Similar to Clostridium acetobutylicum ATP synthase C FT chain AtpE or AtpC or cac2870 SWALL:ATPL_CLOAB FT (SWALL:O08310) (81 aa) fasta scores: E(): 7.5e-12, 50.64 id FT in 77 aa, and to Clostridium pasteurianum ATP synthase FT subunit C AtpE SWALL:Q93Q49 (EMBL:AF283808) (83 aa) fasta FT scores: E(): 1.4e-12, 53.24 38d in 77 aa" FT /db_xref="GOA:A5HY47" FT /db_xref="InterPro:IPR000454" FT /db_xref="InterPro:IPR002379" FT /db_xref="InterPro:IPR005953" FT /db_xref="InterPro:IPR020537" FT /db_xref="UniProtKB/Swiss-Prot:A5HY47" FT /protein_id="CAL81706.1" FT /translation="MDPKAFVSGMAALGAGIAALACIGAGIGTGNATGKAVEGVSRQPE FT ASGKIMSTLVIGSAFSEATAIYGLIIALFLIFKI" FT sig_peptide 186519..186612 FT /gene="atpC" FT /gene_synonym="atpE" FT /locus_tag="CBO0151" FT /note="probabilty 0.999, with cleavage site probability FT 0.553 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(186531..186599,186681..186749) FT /note="2 probable transmembrane helices predicted for FT CBO0151 by TMHMM2.0 at aa 5-27 and 55-77" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 186546..186752 FT /note="Pfam match to entry PF00137 ATP-synt_C, ATP synthase FT subunit C, score 102.5, E-value 8.6e-28" FT /inference="protein motif:Pfam:PF00137" FT misc_feature 186552..186584 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 186639..186704 FT /note="PS00605 ATP synthase c subunit signature." FT /inference="protein motif:ProSite:PS00605" FT CDS 186834..187313 FT /transl_table=11 FT /gene="atpB" FT /gene_synonym="atpF" FT /locus_tag="CBO0152" FT /product="ATP synthase B chain" FT /EC_number="3.6.3.14" FT /note="Similar to Clostridium acetobutylicum ATP synthase B FT chain AtpF or AtpB or cac2869 SWALL:ATPF_CLOAB FT (SWALL:O05098) (159 aa) fasta scores: E(): 8.5e-19, 49.68 FT id in 159 aa" FT /db_xref="GOA:A5HY48" FT /db_xref="InterPro:IPR002146" FT /db_xref="InterPro:IPR005864" FT /db_xref="UniProtKB/Swiss-Prot:A5HY48" FT /protein_id="CAL81707.1" FT /translation="MNISIPQIIAAILNFIILLLIVKHFWFDKITAVVDSRQSEIINKI FT EDTDKNQKLALELKEKNELELSNAKKQGKTIVEEYKSKAENVYEDIVKEAHEEADRIIK FT KSRLEAERQKKNAEEEIRAEAVELAVLVSSKTLEKTIDDLEHRRLIKDFISKVGI" FT misc_feature 186846..186914 FT /note="1 probable transmembrane helix predicted for CBO0152 FT by TMHMM2.0 at aa 5-27" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 186852..187310 FT /note="Pfam match to entry PF00430 ATP-synt_B, ATP synthase FT B/B' CF(0), score 76.6, E-value 5.3e-20" FT /inference="protein motif:Pfam:PF00430" FT CDS 187316..187855 FT /transl_table=11 FT /gene="atpH" FT /locus_tag="CBO0153" FT /product="ATP synthase subunit delta" FT /note="Similar to Clostridium acetobutylicum ATP synthase FT subunit delta AtpH or cac2868 SWALL:Q9Z690 (EMBL:AF101055) FT (179 aa) fasta scores: E(): 1e-30, 56.98 38d in 179 aa" FT /db_xref="GOA:A5HY49" FT /db_xref="InterPro:IPR000711" FT /db_xref="InterPro:IPR020781" FT /db_xref="UniProtKB/Swiss-Prot:A5HY49" FT /protein_id="CAL81708.1" FT /translation="MYEYLDRRYALALYEVAEENNKVDEYLRDLKEVVNIIKNSEDICK FT ILKHPEINTSRKKEIFTELFKDKVDDKILSFLLVLIEKDRILYLEEKLKEMEKIYLEKN FT NMILANIKTVIPLLKEEREELIEKLGNKYNKKIILEEEIDKSIIGGVYVRVGDDVLDGT FT LSTRLKDIKKMMLKRE" FT misc_feature 187328..187840 FT /note="Pfam match to entry PF00213 OSCP, ATP synthase delta FT (OSCP) subunit, score 149.0, E-value 8.6e-42" FT /inference="protein motif:Pfam:PF00213" FT misc_feature 187724..187783 FT /note="PS00389 ATP synthase delta (OSCP) subunit FT signature." FT /inference="protein motif:ProSite:PS00389" FT CDS 187866..189380 FT /transl_table=11 FT /gene="atpA" FT /locus_tag="CBO0154" FT /product="ATP synthase alpha chain" FT /EC_number="3.6.3.14" FT /note="Similar to Clostridium acetobutylicum ATP synthase FT alpha chain AtpA or cac2867 SWALL:ATPA_CLOAB (SWALL:Q9Z689) FT (505 aa) fasta scores: E(): 2.5e-146,79.32 38d in 503 aa" FT /db_xref="GOA:A5HY50" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR000793" FT /db_xref="InterPro:IPR004100" FT /db_xref="InterPro:IPR005294" FT /db_xref="InterPro:IPR018118" FT /db_xref="InterPro:IPR020003" FT /db_xref="InterPro:IPR023366" FT /db_xref="UniProtKB/Swiss-Prot:A5HY50" FT /protein_id="CAL81709.1" FT /translation="MNIKPEEITSIIRQQIENFNTNIETIDSGTIIQIGDGIARVYGLE FT DCMEGELIEFPNDVYGMALNLEQDNVGCVLLGSEEGIKEGNVVKRTKKVVEVPVGEALV FT GRVVNSLGMPIDGKGPVLTTETRDVEVPAPGVIDRQSVKEPLQTGIKAIDSMIPIGKGQ FT RELIIGDRQTGKTAIAMDTILNQKGKDVICIYVAIGQKQSTVAHIVNDLTKMGAMDYTI FT VVSSTASDSAPLQYLAPYAGCSMGEYFMHKGKDVLIVYDDLSKHAVAYRTMSLLLRRPP FT GREAYPGDVFYLHSRLLERSARLSEKLGGGSLTALPIVETLAGDVTAYIPTNVISITDG FT QIFLESELFNAGQRPAVNAGISVSRVGGNAQIKAMKQVAGTLRLELAQYRELAAFSQFG FT SDLDKESVKRLEKGKRLVEILKQPQYSPMPVEKEIIILYAAVSNHLIDIPVNKIKEFEK FT ELFNYIDTHYRDIGKDILEHKQLTDELKSKLDKAINDFKNVFLSEI" FT misc_feature 187935..188141 FT /note="Pfam match to entry PF02874 ATP-synt_ab_N, ATP FT synthase alpha/beta family, beta-barrel domain, score 82.9, FT E-value 6.9e-22" FT /inference="protein motif:Pfam:PF02874" FT misc_feature 188370..188393 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 188433..188975 FT /note="Pfam match to entry PF00006 ATP-synt_ab, ATP FT synthase alpha/beta family, nucleotide-binding domain,score FT 368.5, E-value 7.5e-108" FT /inference="protein motif:Pfam:PF00006" FT misc_feature 188928..188957 FT /note="PS00152 ATP synthase alpha and beta subunits FT signature." FT /inference="protein motif:ProSite:PS00152" FT misc_feature 188979..189305 FT /note="Pfam match to entry PF00306 ATP-synt_ab_C, ATP FT synthase alpha/beta chain, C terminal domain, score FT 123.1,E-value 5.3e-34" FT /inference="protein motif:Pfam:PF00306" FT CDS 189402..190250 FT /transl_table=11 FT /gene="atpG" FT /locus_tag="CBO0155" FT /product="ATP synthase subunit gamma" FT /note="Similar to Clostridium acetobutylicum ATP synthase FT subunit gamma AtpG or cac2866 SWALL:Q9Z688 (EMBL:AF101055) FT (282 aa) fasta scores: E(): 9.3e-48, 48.93 38d in 282 FT aa,and to Clostridium pasteurianum ATP synthase gamma FT subunit AtpG SWALL:Q93Q45 (EMBL:AF283808) (281 aa) fasta FT scores: E(): 1.3e-52, 53.21 38d in 280 aa" FT /db_xref="GOA:A5HY51" FT /db_xref="InterPro:IPR000131" FT /db_xref="InterPro:IPR023632" FT /db_xref="InterPro:IPR023633" FT /db_xref="UniProtKB/Swiss-Prot:A5HY51" FT /protein_id="CAL81710.1" FT /translation="MAGAGLIGIRRRIKSVTNIRKITKAMGLVSTAKLRKARVNLEINK FT KYYNEYKIILKDIINFIEDSNIYIDGNGSHKKLYVIFTSDSGLCGSFNINIINNVINEI FT KEDKENSLVIVIGQKGRMYLKKLGINTLAEYIEIPDVPTTKEAGTIAKNIIKLYSSKEV FT GEVFLVYSEFYSPVKQQVLINKILPFTKENKSDNKYIEFNPPVTQLMDEILENYLKATI FT LNCFSNSKASENGSRMTAMNGATDNANDLLDNLDLQFNRLRQSAITQEISEIVGGAEAQ FT R" FT misc_feature 189411..190244 FT /note="Pfam match to entry PF00231 ATP-synt, ATP FT synthase,score 292.0, E-value 7.9e-85" FT /inference="protein motif:Pfam:PF00231" FT misc_feature 190200..190241 FT /note="PS00153 ATP synthase gamma subunit signature." FT /inference="protein motif:ProSite:PS00153" FT CDS 190264..191655 FT /transl_table=11 FT /gene="atpD" FT /locus_tag="CBO0156" FT /product="ATP synthase beta chain" FT /EC_number="3.6.3.14" FT /note="Similar to Clostridium acetobutylicum ATP synthase FT beta chain AtpD or cac2865 SWALL:ATPB_CLOAB (SWALL:Q9Z687) FT (466 aa) fasta scores: E(): 1.5e-135, 81.52 38d in 460 aa" FT /db_xref="GOA:A5HY52" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR000793" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004100" FT /db_xref="InterPro:IPR005722" FT /db_xref="InterPro:IPR018118" FT /db_xref="InterPro:IPR020003" FT /db_xref="InterPro:IPR024034" FT /db_xref="UniProtKB/Swiss-Prot:A5HY52" FT /protein_id="CAL81711.1" FT /translation="MSNLGKVIQIIGPIIDIKFDSENLPDLFNALEINAGDRKVIAEVE FT QHIGDDTIRAIAMEDTEGLKRGMEALDTGKSVSVPVGKEVLGRLFNVLGKPIDGAGEFI FT SEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPYQKGGKIGLFGGAGVGKTVLIQE FT LINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEKTALVFGQMNEPPGARMRVA FT LTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQ FT ERITSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSITELGIYPAVDPLE FT SSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAILGIDELSEEDKLVVGRARKIQ FT RFLSQPFTVAEQFTGMQGKYVPIKETVRGFKEILEGKHDNIPESAFLFQGTIEDVLKKA FT QQMEI" FT misc_feature 190282..190485 FT /note="Pfam match to entry PF02874 ATP-synt_ab_N, ATP FT synthase alpha/beta family, beta-barrel domain, score 91.3, FT E-value 2.1e-24" FT /inference="protein motif:Pfam:PF02874" FT misc_feature 190714..190737 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 190780..191310 FT /note="Pfam match to entry PF00006 ATP-synt_ab, ATP FT synthase alpha/beta family, nucleotide-binding domain,score FT 301.2, E-value 1.3e-87" FT /inference="protein motif:Pfam:PF00006" FT misc_feature 191263..191292 FT /note="PS00152 ATP synthase alpha and beta subunits FT signature." FT /inference="protein motif:ProSite:PS00152" FT misc_feature 191317..191652 FT /note="Pfam match to entry PF00306 ATP-synt_ab_C, ATP FT synthase alpha/beta chain, C terminal domain, score FT 169.6,E-value 5.6e-48" FT /inference="protein motif:Pfam:PF00306" FT CDS 191680..192081 FT /transl_table=11 FT /gene="atpC" FT /locus_tag="CBO0157" FT /product="ATP synthase epsilon chain" FT /EC_number="3.6.3.14" FT /note="Similar to Clostridium acetobutylicum ATP synthase FT epsilon chain AtpC or cac2864 SWALL:ATPE_CLOAB FT (SWALL:Q9Z686) (133 aa) fasta scores: E(): 4.7e-21, 48.85 FT id in 131 aa" FT /db_xref="GOA:A5HY53" FT /db_xref="InterPro:IPR001469" FT /db_xref="InterPro:IPR020546" FT /db_xref="InterPro:IPR020547" FT /db_xref="UniProtKB/Swiss-Prot:A5HY53" FT /protein_id="CAL81712.1" FT /translation="MKDNIELTIFTPEKNIKIGEIKEVITEGLDGDLAILPNHVNMITY FT LKPTITKYIDLNGNKNNIFTSSGVLKVEDNKVYIICDASEKPEDIDIKRAENARKRAEE FT RLRNKKEIDVKRAELALFRSIARIKIKEL" FT misc_feature 191689..191937 FT /note="Pfam match to entry PF02823 ATP-synt_DE_N, ATP FT synthase, Delta/Epsilon chain, beta-sandwich domain, score FT 44.8, E-value 2.1e-10" FT /inference="protein motif:Pfam:PF02823" FT CDS 192274..192981 FT /transl_table=11 FT /locus_tag="CBO0158" FT /product="putative exported protein" FT /note="Similar to Clostridium acetobutylicum predicted FT membrane protein cac2863 SWALL:Q97F78 (EMBL:AE007784) (235 FT aa) fasta scores: E(): 2.2e-13, 31.09 38d in 238 aa" FT /db_xref="InterPro:IPR014794" FT /db_xref="UniProtKB/TrEMBL:A5HY54" FT /protein_id="CAL81713.1" FT /translation="MNKKIKFGILIILLFSIIIVLFIPKNYSKAKDKDDLFFEIVDETN FT SNIIEVGSNVTFSTKLQNEEIAKEICSYLGLDKDFNKNSINKNGNYNIYFYDEEVSGNI FT SIKECNDENIVMVDFKSFTLNKSFINLKNNLKSYLNLKNKKDYVFEYLKAENDSKNLKK FT LNDDIILILNKSNARNIEAIKLDNGYSTTAYTKRYTPIKVCGKKIDFNYAVCKYNSEKT FT YLILGTPQINLTY" FT sig_peptide 192274..192361 FT /locus_tag="CBO0158" FT /note="probabilty 1.000, with cleavage site probability FT 0.895 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS 193005..194261 FT /transl_table=11 FT /gene="murA" FT /gene_synonym="muraA" FT /locus_tag="CBO0159" FT /product="udp-N-acetylglucosamine 1-carboxyvinyltransferase FT 1" FT /EC_number="2.5.1.7" FT /note="Similar to Bacillus subtilis udp-N-acetylglucosamine FT 1-carboxyvinyltransferase 1 MuraA or MurA or bsu36760 FT SWALL:MUA1_BACSU (SWALL:P70965) (436 aa) fasta scores: E(): FT 3.2e-82, 55.47 38d in 420 aa, and to Clostridium tetani FT udp-N-acetylglucosamine 1-carboxyvinyltransferase ctc00314 FT SWALL:Q898X3 (EMBL:AE015936) (417 aa) fasta scores: E(): FT 3.4e-116,75.54 38d in 417 aa" FT /db_xref="GOA:A5HY55" FT /db_xref="InterPro:IPR001986" FT /db_xref="InterPro:IPR005750" FT /db_xref="InterPro:IPR013792" FT /db_xref="UniProtKB/TrEMBL:A5HY55" FT /protein_id="CAL81714.1" FT /translation="MDKIVVNGGSQLKGDVNISTAKNSVLPIIAGSILSGNKCVIDNAP FT MLEDVFVIGEILKSISAKVNIDEVNNRVIIDSKPVDNLEPDSDLVKKMRASFLLMGPMM FT SRFGRFKISLPGGCNIGTRPIDLHLKGFTALGAKVNIGHGYVEAVADKLIGNKIYLDFP FT SVGATENIMMASVMAEGETVIENAAEEPEIEDLGRFLNSIGANIIGAGTDTVRIIGVNE FT LKGTTHRPIYDRIEAGTFMIAAAITKSRIKINGVIEEHLKPIIAKLTEMGVDIKIKGET FT AIVDGRKILNPVDIKTMPYPGFPTDMQAQMMALLATIKGTSIITETIFENRFMHVSEMK FT RMGADVKIDGRSAVIEGVNKLTGTEVKATDLRAGAALILCALAAEGKTEITDVYHIDRG FT YVKIEEKLNKLGANIRRVH" FT misc_feature 193026..194225 FT /note="Pfam match to entry PF00275 EPSP_synthase, EPSP FT synthase (3-phosphoshikimate FT 1-carboxyvinyltransferase),score 473.9, E-value 1.3e-139" FT /inference="protein motif:Pfam:PF00275" FT misc_feature 194145..194168 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 194531..195607 FT /transl_table=11 FT /gene="spoIID" FT /gene_synonym="spoIIC" FT /locus_tag="CBO0160" FT /product="stage II sporulation protein D" FT /note="Similar to Bacillus subtilis stage ii sporulation FT protein D SpoIID or spoIIC or bsu36750 SWALL:SP2D_BACSU FT (SWALL:P07372) (343 aa) fasta scores: E(): 2.9e-17, 35.07 FT id in 345 aa, and to Clostridium tetani stage II FT sporulation protein D ctc00315 SWALL:Q898X2 (EMBL:AE015936) FT (376 aa) fasta scores: E(): 1.9e-56,48.17 38d in 357 aa" FT /db_xref="GOA:A5HY56" FT /db_xref="InterPro:IPR013486" FT /db_xref="InterPro:IPR013693" FT /db_xref="InterPro:IPR014225" FT /db_xref="UniProtKB/TrEMBL:A5HY56" FT /protein_id="CAL81715.1" FT /translation="MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETI FT SKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNEKVVKSIPLEEYVKGVVSAEMPAEF FT HIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEK FT RNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKS FT PGEEKAPKFKSSKKISYDQFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKID FT NIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDY FT ILKHYYKGVNMEILKYSD" FT sig_peptide 194531..194636 FT /gene="spoIID" FT /gene_synonym="spoIIC" FT /locus_tag="CBO0160" FT /note="probabilty 1.000, with cleavage site probability FT 0.327 between residues 36 and 37" FT /inference="protein motif:SignalP:2.0" FT misc_feature 195509..195532 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region complement(195728..195811) FT /note="intergenic repeat 1" FT repeat_region 195931..195960 FT CDS 196139..196885 FT /transl_table=11 FT /locus_tag="CBO0161" FT /product="putative secreted peptidase" FT /note="Similar to Clostridium tetani conserved FT membrane-associated protein ctc00316 SWALL:Q898X1 FT (EMBL:AE015936) (271 aa) fasta scores: E(): 1.1e-27, 51.6 FT id in 250 aa, and to Clostridium perfringens hypothetical FT protein Cpe2182 cpe2182 SWALL:Q8XID9 (EMBL:AP003193) (256 FT aa) fasta scores: E(): 1.5e-17, 32.94 38d in 255 aa" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:A5HY57" FT /protein_id="CAL81716.1" FT /translation="MEKKPSNKKSNFFKKEGFYVVLFLCLCIVAAIAAISVKSNSHVKK FT EPIENKVVENKKEKDSAKAIEGNSKSYNNALEVKKEENKENEKEKNKENEKSKQNEKET FT AQVSKAENNSFIKPVEGTLARVYSEDPVFWSSTSSYRANLGLDIKAKLNSPVCSIADGK FT VEDIVTSSQDGVKVTVNHQNGIKSVYANLDPKVKVTKGQQIKQGSLIGNVGKTTLRAAY FT EKYGDHLHFAMMKGNKYINPSKHIKY" FT sig_peptide 196139..196253 FT /locus_tag="CBO0161" FT /note="probabilty 1.000, with cleavage site probability FT 0.395 between residues 39 and 40" FT /inference="protein motif:SignalP:2.0" FT misc_feature 196607..196873 FT /note="Pfam match to entry PF01551 Peptidase_M37,Peptidase FT family M23/M37, score 54.6, E-value 2.2e-13" FT /inference="protein motif:Pfam:PF01551" FT CDS 196993..197247 FT /transl_table=11 FT /gene="spoIIID" FT /locus_tag="CBO0162" FT /product="stage III sporulation protein D" FT /note="Similar to Bacillus subtilis stage III sporulation FT protein D SpoIIID or bsu36420 SWALL:SP3D_BACSU FT (SWALL:P15281) (93 aa) fasta scores: E(): 1.1e-16, 62.65 id FT in 83 aa, and to Clostridium acetobutylicum stage iii FT sporulation protein D SpoIIID cac2859 SWALL:Q97F82 FT (EMBL:AE007783) (84 aa) fasta scores: E(): 9e-24, 89.28 id FT in 84 aa" FT /db_xref="GOA:A5HY58" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR014208" FT /db_xref="InterPro:IPR018356" FT /db_xref="UniProtKB/TrEMBL:A5HY58" FT /protein_id="CAL81717.1" FT /translation="MKDYIEERVLEVAHYIIDSKATIRKTAKVFGVSKSTIHKDMTERL FT PKINPQIAEEAKEILDYNKAERHIRGGKATKMKYKAIEG" FT misc_feature 197014..197115 FT /note="PS00894 Bacterial regulatory proteins, deoR family FT signature." FT /inference="protein motif:ProSite:PS00894" FT misc_feature 197053..197118 FT /note="Predicted helix-turn-helix motif with score FT 1446.000, SD 4.11 at aa 21-42, sequence FT ATIRKTAKVFGVSKSTIHKDMT" FT CDS 197347..198375 FT /transl_table=11 FT /gene="mreB" FT /locus_tag="CBO0163" FT /product="rod shape-determining protein" FT /note="Similar to Escherichia coli, Escherichia coli FT O6,Salmonella typhimurium, Salmonella typhi, and Shigella FT flexneri rod shape-determining protein MreB FT SWALL:MREB_ECOLI (SWALL:P13519) (347 aa) fasta scores: E(): FT 4.4e-58, 51.67 38d in 329 aa, and to Clostridium tetani rod FT shape-determining protein MreB mreb or ctc00318 FT SWALL:Q898X0 (EMBL:AE015937) (343 aa) fasta scores: E(): FT 1.4e-89, 76.6 38d in 342 aa" FT /db_xref="GOA:A5HY59" FT /db_xref="InterPro:IPR001023" FT /db_xref="InterPro:IPR004753" FT /db_xref="UniProtKB/TrEMBL:A5HY59" FT /protein_id="CAL81718.1" FT /translation="MFFSVGTDMGIDLGTATVLVYMKGKGVILNEPSVVAIDRNKNKVL FT AVGQEAREMIGRTPGNIVAIRPMRDGVISDYDITEKMLKYFIGKACGKKKISAPRVVIC FT IPSEATEVEKRAVMDAARNAGAKKVFLIEEPLAAAIGADLDITKASGSMIIDIGGGTTD FT IAVISLGGIVVRSSIKIAGDKFDDAVIKYIRKKHKLMIGERTAEDLKIKIGSAFRKGEN FT TSMDIRGRDLVTGLPKNLTVTSDEMREALQDTVNAIAELTHSVLEKTPPELSADIADKG FT IIMTGGGALLSGLSDLIESVNKVPVHIAENPVSCVAEGTGKMLEYLDKMGISESGDGLN FT LL" FT CDS complement(198500..199024) FT /transl_table=11 FT /locus_tag="CBO0164" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum spore protease FT gpr related protein, yyac b.subtilis ortholog cac2857 FT SWALL:Q97F84 (EMBL:AE007783) (188 aa) fasta scores: E(): FT 4e-36, 59.06 38d in 171 aa" FT /db_xref="InterPro:IPR009665" FT /db_xref="InterPro:IPR023430" FT /db_xref="UniProtKB/TrEMBL:A5HY60" FT /protein_id="CAL81719.1" FT /translation="MNIEKIHYMESLSYYKIANTLKNYLNKDTIIICIGTDRCIGDCLG FT PLVGTILRYKNIPLKLYGTLDEPIHALNIEKTIKNIKNSYPNSSIIGIDACLGDKDNIG FT QIQVRNFPIQPGKGVGKTLPKVGDCSIVGIVDSNENCDIFTSANTRLSLILNIAKVIAN FT SILQCCYILDI" FT CDS complement(199073..199795) FT /transl_table=11 FT /locus_tag="CBO0165" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani ATPase of the pp-loop FT superfamily ctc00320 SWALL:Q898W8 (EMBL:AE015937) (236 aa) FT fasta scores: E(): 5.2e-62, 64.4 38d in 236 aa" FT /db_xref="GOA:A5HY61" FT /db_xref="InterPro:IPR011063" FT /db_xref="InterPro:IPR012089" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:A5HY61" FT /protein_id="CAL81720.1" FT /translation="MQKLLGKLRRAVGDFNLIQNGDKIAVGLSGGKDSIVLLHLLKKYQ FT SFSPEKFDLIAITLDTMTGADFSPLENVCSNINVPLYIYKTPIKEIVFDLRKEKNPCSL FT CANLRRGALNNYSKKLGCNKIALGHHKNDAIETLLMSMLYEGRVSCFSPKTYLNKANIT FT IIRPMIYIDEIAIKSMIKRYDLPIIKNPCPANGNTKRQYMKELTYTLEKDIPKVKDRLL FT GCLTNINQINLWDKDKIQ" FT misc_feature complement(199115..199729) FT /note="Pfam match to entry PF01171 ATP_bind3, PP-loop FT family, score 62.7, E-value 8.5e-16" FT /inference="protein motif:Pfam:PF01171" FT tRNA 200023..200098 FT /gene="tRNA Thr (TGT)" FT /note="Cove score 90.80" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 200104..200188 FT /gene="tRNA Tyr (GTA)" FT /note="Cove score 60.97" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 200202..200277 FT /gene="tRNA Val (TAC)" FT /note="Cove score 90.83" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 200295..200370 FT /gene="tRNA Thr (TGT)" FT /note="Cove score 88.90" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 200376..200460 FT /gene="tRNA Tyr (GTA)" FT /note="Cove score 60.97" FT /inference="nucleotide motif:tRNAscanSE" FT misc_binding 200595..200696 FT /gene="metK" FT /gene_synonym="metE" FT /locus_tag="CBO0168" FT /bound_moiety="S-adenosyl methionine" FT /note="S_box leader" FT CDS 200776..201951 FT /transl_table=11 FT /gene="metK" FT /gene_synonym="metE" FT /locus_tag="CBO0168" FT /product="S-adenosylmethionine synthetase" FT /EC_number="2.5.1.6" FT /note="Similar to Bacillus subtilis S-adenosylmethionine FT synthetase MetK or MetE or bsu30550 SWALL:METK_BACSU FT (SWALL:P54419) (400 aa) fasta scores: E(): 8.8e-109,74.93 FT 38d in 391 aa, and to Clostridium acetobutylicum FT S-adenosylmethionine synthetase MetK or cac2856 FT SWALL:METK_CLOAB (SWALL:Q97F85) (391 aa) fasta scores: E(): FT 6.1e-124, 84.39 38d in 391 aa" FT /db_xref="GOA:A5HY62" FT /db_xref="InterPro:IPR002133" FT /db_xref="InterPro:IPR022628" FT /db_xref="InterPro:IPR022629" FT /db_xref="InterPro:IPR022630" FT /db_xref="InterPro:IPR022631" FT /db_xref="InterPro:IPR022636" FT /db_xref="UniProtKB/Swiss-Prot:A5HY62" FT /protein_id="CAL81721.1" FT /translation="MRKLFTSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAV FT TTGMVMVMGEISTKCYVDIPKLVRETIRGIGYDRAKYGFDCETCSVITSIDEQSVDIAM FT GVDEALESKKGEMDKLDAVGAGDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKN FT GTLPYLRPDGKTQVTVEYENGKPVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPS FT ELLDENTKYFINPTGRFVVGGPQGDSGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDR FT SAAYAARWVAKNLVAAGVADKLEIQLAYAIGVAKPVSISVDTFGTGKMTDEEIVSIVNK FT VFDLRPGAIIRDLDLRRPIYKQVAAYGHFGRTDIDVPWERLDKVEEIKKHI" FT misc_feature 200776..201078 FT /note="Pfam match to entry PF00438 FT S-AdoMet_synt,S-adenosylmethionine synthetase, N-terminal FT domain, score 202.7, E-value 6e-58" FT /inference="protein motif:Pfam:PF00438" FT misc_feature 201136..201492 FT /note="Pfam match to entry PF02772 FT S-AdoMet_syntD2,S-adenosylmethionine synthetase, central FT domain, score 286.4, E-value 3.9e-83" FT /inference="protein motif:Pfam:PF02772" FT misc_feature 201145..201177 FT /note="PS00376 S-adenosylmethionine synthetase signature FT 1." FT /inference="protein motif:ProSite:PS00376" FT misc_feature 201496..201915 FT /note="Pfam match to entry PF02773 FT S-AdoMet_syntD3,S-adenosylmethionine synthetase, C-terminal FT domain, score 291.3, E-value 1.2e-84" FT /inference="protein motif:Pfam:PF02773" FT misc_feature 201574..201600 FT /note="PS00377 S-adenosylmethionine synthetase signature FT 2." FT /inference="protein motif:ProSite:PS00377" FT CDS 202142..204376 FT /transl_table=11 FT /locus_tag="CBO0169" FT /product="putative DNA-interacting protein" FT /note="Similar to Clostridium tetani exodeoxyribonuclease v FT alpha chain ctc00322 SWALL:Q898W6 (EMBL:AE015937) (743 aa) FT fasta scores: E(): 1.3e-187, 68.18 38d in 745 aa" FT /db_xref="GOA:A5HY63" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR006345" FT /db_xref="InterPro:IPR007807" FT /db_xref="InterPro:IPR010994" FT /db_xref="UniProtKB/TrEMBL:A5HY63" FT /protein_id="CAL81722.1" FT /translation="MQEIQGFIEDILFKNDENGYVVAKIRKKKELITIVGCMPYITEGQ FT NLKLKGEWVIHPQFGNQFKVEICEEIVPDTVAGIERYLSSGIISGIGPVTAKKIVKKFG FT EETLNILDNNIERLTEIEGIGKKKIEVIYDSYIKQNEVRNIMMFFQNYGVTPNQCMKVY FT KRFGENSISIVKENPYILTEEIRGIGFKTADKIARSLGIASNSPFRIQSGINYIINGFC FT SLGNTYMPLEKLISEAMDILGVKEEEIHENIYNNVAENKLKIEKVKERSCVFTLPYYYC FT ELGVTKKILSLSLSQYDNLNINIEDEIVRFEKNNNIKFHDSQREAIKGALENGVEIITG FT GPGTGKTTIINCITEIFEKANMKVYMAAPTGRAAKRMSETTGREAKTIHRMLEMGVSED FT DTEEVFSKGEETPLECDVVIIDEASMIDIILMNTLLKAIALGTRIIIVGDVDQLPSVGP FT GNVLRDLIESKCVKVVRLKEIFRQSKESMIIVNAHRINDGEMPIINKKDKDFYFIECSE FT PKKIVNTLLELSNRRLPKFNKSWHKIHDIQILSPMRKGILGVSSLNKELQSVLNPKNDS FT KKEMEFKDYIFRVGDKVMQTKNNYSLKWTRASGEGEAEGLGIFNGDVGYIEDIDEEKET FT IQVLFDNERRVVYENLYLDEIDLAYAVTIHKSQGSEFPVVIMPAFKGPPLLMNRNLLYT FT GITRAKRLVVLVGSLKAINFMVQNDKIFERYSLLKWRISNILDTEIINGE" FT misc_feature 202403..202447 FT /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix FT motif, score 6.5, E-value 0.49" FT /inference="protein motif:Pfam:PF00633" FT misc_feature 202457..202546 FT /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix FT motif, score 14.8, E-value 0.0019" FT /inference="protein motif:Pfam:PF00633" FT misc_feature 202688..202738 FT /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix FT motif, score 2.0, E-value 10" FT /inference="protein motif:Pfam:PF00633" FT misc_feature 203159..203182 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 204402..205424 FT /transl_table=11 FT /locus_tag="CBO0170" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00323 SWALL:Q898W5 (EMBL:AE015937) (354 aa) fasta FT scores: E(): 9.6e-44, 38.26 38d in 345 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY64" FT /protein_id="CAL81723.1" FT /translation="MSLLKRSKKEYEVNEFSEIILNWCKGREKFLNVISMPYNTTDFFV FT DSILYLIKNRNNILYITNEKEKSIDIIQNIKKRSDFRQYSYIKKSRLDIISNLKVTNFN FT VAFNMNEKFDFIIYDDLSSYANHNKDSIKDLILSKLTNEGKCIMYSIESLFPHSRSICI FT PFKKDRMPIIEPRTLLTRINISNEIPFIIYDYMKWSFRSKRKVIIYTPSYFISENLYNY FT FQNYINKIDVNIILDMELGSSKSLFNFEKMKEGVFITHLFYHEFSKLKDTDLIIYGSDK FT NKFNYKELIYLCGTIGRGEYDFKGEIIFLANMETVHMEKAKNIIRSFNKEAWELGFLTI FT " FT CDS 205451..206074 FT /transl_table=11 FT /locus_tag="CBO0171" FT /product="putative phosphoribosyl transferase" FT /note="Similar to Haemophilus influenzae competence protein FT F ComF or hi0434 SWALL:COMF_HAEIN (SWALL:P31773) (229 aa) FT fasta scores: E(): 4.7e-05, 25.83 38d in 209 aa,and to FT Clostridium acetobutylicum predicted FT amidophosphoribosyltransferase, ComC b.suntilis ortholog FT cac2852 SWALL:Q97F89 (EMBL:AE007783) (226 aa) fasta scores: FT E(): 6.3e-31, 46.63 38d in 208 aa" FT /db_xref="GOA:A5HY65" FT /db_xref="InterPro:IPR000836" FT /db_xref="UniProtKB/TrEMBL:A5HY65" FT /protein_id="CAL81724.1" FT /translation="MIYPYENKCVICEKYIEEDLICKECFSSIKRCSDVKIIEKGKDCF FT PAFPTCYYSGIMMELILNLKYKGDFKSGEVIANLMCKKVKEVNINTDIITFVPSSKKSY FT KKRGYNQSEYLAKIISKNINVPIAHCLKKYMNTKDQIGLNGLERWLNVENSFKVYNEKC FT IKNKKVLLIDDVLTTGATSFYCANELKKRGAKEIFILTAAKSDV" FT misc_feature 205940..206056 FT /note="Pfam match to entry PF00156 FT Pribosyltran,Phosphoribosyl transferase domain, score 31.1, FT E-value 7.4e-09" FT /inference="protein motif:Pfam:PF00156" FT misc_feature 205955..205993 FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT /inference="protein motif:ProSite:PS00103" FT CDS 206499..207026 FT /transl_table=11 FT /locus_tag="CBO0172" FT /product="putative sigma 54 modulation protein/S30EA FT ribosomal protein" FT /note="Similar to Synechococcus sp. light repressed protein FT A LrtA SWALL:LRTA_SYNP2 (SWALL:P47908) (192 aa) fasta FT scores: E(): 4.8e-13, 35.97 38d in 189 aa, and to FT Clostridium tetani ssu ribosomal protein S30P ctc00325 FT SWALL:Q898W3 (EMBL:AE015937) (176 aa) fasta scores: E(): FT 1.5e-47, 75.56 38d in 176 aa" FT /db_xref="GOA:A5HY66" FT /db_xref="InterPro:IPR003489" FT /db_xref="UniProtKB/TrEMBL:A5HY66" FT /protein_id="CAL81725.1" FT /translation="MKITVIGKNIEITNALRETVEKKLSKLERFFNPDVVATATLSVHK FT NKQTIEVTIPFHGVILRGEETTEDMYASIDMVIDKLEGQVRKQKTKLQRKIHDGSLRFQ FT YIPDYESEENKETQIVKTKKFAMKPMSSEEAVLQMELLGHNFFVYQNADTEEVNVIYRR FT KDGNYGLIEPEF" FT misc_feature 206502..206783 FT /note="Pfam match to entry PF02482 Ribosomal_S30AE, Sigma FT 54 modulation protein / S30EA ribosomal protein, score FT 97.7, E-value 2.4e-26" FT /inference="protein motif:Pfam:PF02482" FT CDS 207254..209761 FT /transl_table=11 FT /gene="secA" FT /gene_synonym="div+" FT /locus_tag="CBO0173" FT /product="preprotein translocase subunit" FT /note="Similar to Bacillus subtilis preprotein translocase FT SecA subunit SecA or Div+ or bsu35300 SWALL:SECA_BACSU FT (SWALL:P28366) (841 aa) fasta scores: E(): 2e-163, 55.3 id FT in 839 aa, and to Clostridium tetani protein translocase FT subunit SecA or ctc00327 SWALL:Q898W1 (EMBL:AE015937) (841 FT aa) fasta scores: E(): 0, 80.33 38d in 834 aa" FT /db_xref="GOA:A5HY67" FT /db_xref="InterPro:IPR000185" FT /db_xref="InterPro:IPR004027" FT /db_xref="InterPro:IPR011115" FT /db_xref="InterPro:IPR011116" FT /db_xref="InterPro:IPR011130" FT /db_xref="InterPro:IPR014018" FT /db_xref="InterPro:IPR020937" FT /db_xref="UniProtKB/Swiss-Prot:A5HY67" FT /protein_id="CAL81726.1" FT /translation="MGILNKIFGTYSERELRRVNPIVNKIEALDEKMQSLKDEDFKLKT FT EEFKSRLEKGEKLDDILPEAFALVREAAHRTIGLKHYREQLIGGVVLHQGRIGEMKTGE FT GKTLVATLPAYVNALTGKGVHIVTVNDYLAKRDRDLMAPVYEFLGLKVGVILHNLNNEE FT RQEAYGSDITYGTNSEFGFDYLRDNMVVYKEERVQRKLNFSIVDEVDSILIDEARTPLI FT ISGQGEKSTEFYKVADYFTKSLIAEKDFTIDEKANSAMLTDEGVNKAENFFKVDNYADA FT ENMEIQHHVVQALKANYVMKKDKDYMIKDGEILIVDEFTGRAMEGRRYSDGLHQAIEAK FT EGVRVERESKTLATITYQNYFRMYNKLSGMTGTAQTEENEFREIYGLDVIVIPTHEPIA FT RIDNADVVYKSEKGKFKAIVDEIVERYKKGQPMLVGTVSIEKSEMLSSMLKKKGVPHQV FT LNAKYHEKEAEIISHAGEYGMVTIATNMAGRGTDIKLTKEAEEAGGLMIIGTERHESRR FT IDNQLRGRSGRQGDPGESRFFVSLEDDLMRIFGSERIQGIVDKLGLAEDEAIESKMVSS FT AIESAQKKVEGNNFDIRKTLLQYDDVINKQREIIYKQRSEVLEGEDLKDQIRDMIRDVV FT YTAVNSHISGVEEEFQTELQNLVNYLEDICLPKALVKVKDISNLSDEEIKEKLLEAVEN FT IYIRKEKEIGEEQIREIERVILLRVVDTKWMDHIDDMDHLKQGIGLRAYRQQDPVQAYQ FT FEGSEMFEEMIYNIKVDTVRYLFHVEVEKAPEREKVAKETSTNYDEDSVKKQPIKKENR FT IGRNDMCPCGSGKKYKNCCGRMA" FT misc_feature 207263..208507 FT /note="Pfam match to entry PF01043 SecA_protein, SecA FT protein, amino terminal region, score 921.7, E-value FT 2.1e-274" FT /inference="protein motif:Pfam:PF01043" FT misc_feature 208691..208738 FT /note="PS01312 Protein secA signatures." FT /inference="protein motif:ProSite:PS01312" FT misc_feature 209696..209758 FT /note="Pfam match to entry PF02810 SEC-C, SEC-C motif,score FT 41.5, E-value 2e-09" FT /inference="protein motif:Pfam:PF02810" FT repeat_region 209822..209854 FT /rpt_family="CB.399" FT /rpt_type=INVERTED FT /rpt_unit_seq="acattcaaataaataacaagtcagtatgacagt" FT /inference="ab initio prediction:REPuter" FT repeat_region complement(209926..209970) FT CDS 210125..211102 FT /transl_table=11 FT /gene="prfB" FT /locus_tag="CBO0175" FT /product="peptide chain release factor 2" FT /note="Similar to Bacillus subtilis peptide chain release FT factor 2 PrfB or bsu35290 SWALL:RF2_BACSU (SWALL:P28367) FT (366 aa) fasta scores: E(): 7e-66, 53.06 38d in 326 aa,and FT to Clostridium tetani bacterial peptide chain release FT factor 2 ctc00328 SWALL:Q898W0 (EMBL:AE015937) (325 aa) FT fasta scores: E(): 2.9e-87, 70.15 38d in 325 aa" FT /db_xref="GOA:A5HY68" FT /db_xref="InterPro:IPR000352" FT /db_xref="InterPro:IPR004374" FT /db_xref="InterPro:IPR005139" FT /db_xref="UniProtKB/TrEMBL:A5HY68" FT /protein_id="CAL81727.1" FT /translation="MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCE FT MLSEEDDDMKKEIISEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWT FT DMLFRMYTRWAEKEGFAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRI FT SPFNANGKRQTSFASIEVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRI FT THMPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQ FT IRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINIFITQYLKGNF" FT misc_feature 210248..210586 FT /note="Pfam match to entry PF03462 PCRF, PCRF domain,score FT 171.7, E-value 1.3e-48" FT /inference="protein motif:Pfam:PF03462" FT misc_feature 210680..211015 FT /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA FT hydrolase domain, score 227.1, E-value 2.6e-65" FT /inference="protein motif:Pfam:PF00472" FT misc_feature 210734..210784 FT /note="PS00745 Prokaryotic-type class I peptide chain FT release factors signature." FT /inference="protein motif:ProSite:PS00745" FT CDS complement(211223..212587) FT /transl_table=11 FT /locus_tag="CBO0176" FT /product="aminopeptidase" FT /note="Similar to Bacillus licheniformis leucine FT aminopeptidase precursor SWALL:Q93EJ5 (EMBL:AF358651) (449 FT aa) fasta scores: E(): 9.2e-10, 26.85 38d in 417 aa, and to FT Clostridium acetobutylicum protein containing FT aminopeptidase domain cac2843 SWALL:Q97F97 (EMBL:AE007782) FT (449 aa) fasta scores: E(): 9.1e-79, 48.59 38d in 428 aa" FT /db_xref="GOA:A5HY69" FT /db_xref="InterPro:IPR007484" FT /db_xref="UniProtKB/TrEMBL:A5HY69" FT /protein_id="CAL81728.1" FT /translation="MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSN FT EFKGRLPGSIENRQVSEYIKDNFKSNNLLPFEENYFHSFGCFYPSKIEGNPYLKVIDSQ FT GNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNDGNFLIYSTNDYGSN FT FRSSFVKEAPYNMYIVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGIN FT PNNDPIIISSHFDHLGEDLNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSF FT NAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVPLCIMGSDKDTANTPLIKELS FT VLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRC FT YNVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL" FT misc_feature complement(order(211280..211348,212510..212569)) FT /note="2 probable transmembrane helices predicted for FT CBO0176 by TMHMM2.0 at aa 7-26 and 414-436" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(211334..211996) FT /note="Pfam match to entry PF04389 Peptidase_M28,Peptidase FT family M28, score 144.9, E-value 1.5e-40" FT /inference="protein motif:Pfam:PF04389" FT sig_peptide complement(212497..212587) FT /locus_tag="CBO0176" FT /note="probabilty 0.715, with cleavage site probability FT 0.445 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT CDS 212695..214851 FT /transl_table=11 FT /locus_tag="CBO0177" FT /product="putative RNA binding protein" FT /note="Similar to Clostridium tetani transcription FT accessory protein ctc00330 SWALL:Q898V8 (EMBL:AE015937) FT (718 aa) fasta scores: E(): 7.4e-199, 77.99 38d in 718 aa" FT /db_xref="GOA:A5HY70" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR006641" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018974" FT /db_xref="InterPro:IPR022967" FT /db_xref="InterPro:IPR023097" FT /db_xref="InterPro:IPR023319" FT /db_xref="InterPro:IPR023323" FT /db_xref="UniProtKB/TrEMBL:A5HY70" FT /protein_id="CAL81729.1" FT /translation="MNNINSILSKELNISIKYIDAVIDLLDQGNTVPFIARYRKEVTGG FT MSDETLRELFERLTYLRNLSSKKEDVIRLIEEQGKLTEELKTSIINCKTVTEVEDLYRP FT YRPKRRTRATIAEEKGLKPLAEIILEGNFKEDIKVYASEFINEEKEVKTIEEALQGAMD FT IISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTPYEMYYDYKENVKNIPPHRILAI FT NRGEKEKILTAKVTCNEDKIIDYLKSRSLKGNKETDVYIEESVKDSLKRLIYPSIEREI FT RSELTEKGEEGAIKIFKENLKALLMQAPIKDKVVLGYDPGFRTGCKIAVLDETGKLLDT FT ATVYATAPQNDVEGSIKVLKKLIYKYDVDVISLGNGTASRESEEVISKMLKEIKEEKGK FT DIYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISICRRLQDPLAELVKIDPKSIGV FT GQYQHDVSQKKLDESLKGVVEDCVNAVGVDLNTATPSLLSYISGINSSIAKNIVAYREE FT IGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEPLDNTGVHPESYEGTKKFLSLLQY FT DIKDVKNNKLQDIDDRVNNIGLDDICNKIDIGKPTLLDIIKEIKKPGRDPREDLPKPIL FT KTGIVDITQLKPDMVLMGTVRNVADFGAFVDIGVHQDGLVHISQLSDRFVKHPLDIVKV FT GDIVEVRILEVDKKRNRISLSMKK" FT misc_feature 214624..214845 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 102.0, E-value 1.2e-27" FT /inference="protein motif:Pfam:PF00575" FT misc_RNA 214923..215039 FT /locus_tag="CBO0178" FT /note="RFN element" FT CDS 215135..215728 FT /transl_table=11 FT /locus_tag="CBO0178" FT /product="putative riboflavin transporter" FT /note="Similar to Clostridium tetani riboflavin transporter FT ctc00331 SWALL:Q898V7 (EMBL:AE015937) (204 aa) fasta FT scores: E(): 5.7e-43, 61.02 38d in 195 aa" FT /db_xref="InterPro:IPR024529" FT /db_xref="UniProtKB/TrEMBL:A5HY71" FT /protein_id="CAL81730.1" FT /translation="MKSSKLNKLVKISVLGTIGFLLMFIEIPIPIFPEFLKIDISDIPA FT LVGGFALGPVAGILIEFMKNILHGIFKGSTVFVGEIANFLVGSVLVGISAYIYKRDKTK FT KGAIVGLAIGAICMSIVAGILNYYVLLPLYEKALNFPIKAIVAIGNKLNPKIVDLKSFI FT FWSIIPFNLLKGVVVSLITAAIYKNVSPILHERK" FT sig_peptide 215135..215255 FT /locus_tag="CBO0178" FT /note="probabilty 0.794, with cleavage site probability FT 0.308 between residues 41 and 42" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(215168..215227,215255..215323,215360..215428, FT 215456..215524,215621..215689) FT /note="5 probable transmembrane helices predicted for FT CBO0178 by TMHMM2.0 at aa 12-31, 41-63, 76-98, 108-130 and FT 163-185" FT /inference="protein motif:TMHMM:2.0" FT CDS 216139..217788 FT /transl_table=11 FT /locus_tag="CBO0179" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00333 SWALL:Q898V6 (EMBL:AE015937) (511 aa) fasta FT scores: E(): 8.9e-30, 40.51 38d in 548 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY72" FT /protein_id="CAL81731.1" FT /translation="MPSISNINNVYSNNTKKISSKISFEIDQIFAAKVVGEGVSPEEVI FT LKLMDGWQFKASIEDLKGKLPDGLLKFKVLGFEEGKLILKFLEGNLVEGQQKEQNPIEE FT LLLKENIKLNKEDYVLLEKMIKHNIPLTKDNILKVVNLSNFMGKLKNSPQEGDSFIQNY FT IKGKGMDLRSAKGQEINNVLKGLFNELQTLTEEDLFILLENNVELTEENVKAFKEVFKE FT SSVYNKVNNINKELNKSSIDNKQIITEKNTSNGDTLVKENLQSTEMESAINNKSENVVK FT NELISTFKTLMATGKEENISIVRDLILEEKDINGILKNFTKEEQEMLGLKPKTEDTEAT FT EQSLTSETTKNIKTKPIEVLANKGQVDSSSIKEQINSKTNEIKDIVKNLIDTLKDTNNS FT SYDKIIGTLKNNINNFKMFNTISNEYYYLDLPLNFKENECDCKIIIKDERGKGKKIDSS FT NVKIATSISTANMDIVDAYITLKNSNMEINIKTIKEWVNLLDKGKNKLIEDMSSMGYNI FT FIKVEEKAEIFNISNCREFFNDNNLNAIDIKA" FT CDS 217800..218069 FT /transl_table=11 FT /locus_tag="CBO0180" FT /product="putative protein exporter" FT /note="Similar to Bacillus subtilis YlqH protein ylqH FT SWALL:O34867 (EMBL:AJ000975) (93 aa) fasta scores: E(): FT 1.6e-07, 38.55 38d in 83 aa, and to Clostridium FT acetobutylicum flagellar biosynthesis related protein FT cac0639 SWALL:Q97LC3 (EMBL:AE007579) (90 aa) fasta scores: FT E(): 2.2e-17, 65 38d in 80 aa" FT /db_xref="GOA:A5HY73" FT /db_xref="InterPro:IPR006135" FT /db_xref="UniProtKB/TrEMBL:A5HY73" FT /protein_id="CAL81732.1" FT /translation="MVILNERKKAAALKYEESYTSPVVTAAGMGYVADKILEKASEEKV FT PIVYDKELANLLTNIDIGDSIPYELYDAVAKVIAYVMEIDERIK" FT misc_feature 217833..218045 FT /note="Pfam match to entry PF01312 Bac_export_2, FlhB HrpN FT YscU SpaS Family, score 37.0, E-value 6.3e-11" FT /inference="protein motif:Pfam:PF01312" FT CDS 218083..218769 FT /transl_table=11 FT /locus_tag="CBO0181" FT /product="putative phosphoesterase" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe0653 cpe0653 SWALL:Q8XMN5 (EMBL:AP003187) (230 FT aa) fasta scores: E(): 3.1e-64, 67.54 38d in 228 aa" FT /db_xref="GOA:A5HY74" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR014578" FT /db_xref="UniProtKB/TrEMBL:A5HY74" FT /protein_id="CAL81733.1" FT /translation="MSLYAISDLHLAFNEDKPMDIFGDKWFMHHERIKENWENKITKDD FT TVLIAGDISWSMKIEEGLHDLEWIHNLKGRKILIKGNHDYWWSSINKLNKLYEDMNFIQ FT NNFFVYENYAICGTRGWNPKPSDNFTAHDEKIYRRELIRLRLSLDAAKKAGMEKFIVML FT HYPATNDKFEDSPITELLKEYNVEKVIYGHLHGISTTRSLEGLRDGVEYYLTSCDHINF FT DPVKIT" FT misc_feature 218083..218673 FT /note="Pfam match to entry PF00149 FT Metallophos,Calcineurin-like phosphoesterase, score 60.6, FT E-value 3.5e-15" FT /inference="protein motif:Pfam:PF00149" FT CDS 218853..219134 FT /transl_table=11 FT /locus_tag="CBO0182" FT /product="ArsR-family transcriptional regulator" FT /note="Similar to Bacillus anthracis transcriptional FT repressor PagR or TcrA or Pxo1-109 SWALL:PAGR_BACAN FT (SWALL:O31178) (99 aa) fasta scores: E(): 8e-09, 41.37 38d FT in 87 aa, and to Bacillus cereus transcriptional regulator, FT ArsR family bc4256 SWALL:Q818J4 (EMBL:AE017011) (96 aa) FT fasta scores: E(): 4.6e-16, 63.09 38d in 84 aa" FT /db_xref="GOA:A5HY75" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HY75" FT /protein_id="CAL81734.1" FT /translation="MDNDYAKYNDIAELLKVLAHPVRICIVKGLLEKGECNVSHMQNCL FT DMPQSTISQHLQKLKSAGIIEGDRNGLQINYHVSNKKAEQLIEILLNE" FT misc_feature 218895..219131 FT /note="Pfam match to entry PF01022 HTH_5, Bacterial FT regulatory protein, arsR family, score 43.7, E-value FT 4.4e-10" FT /inference="protein motif:Pfam:PF01022" FT misc_feature 218958..219023 FT /note="Predicted helix-turn-helix motif with score FT 1129.000, SD 3.03 at aa 36-57, sequence FT CNVSHMQNCLDMPQSTISQHLQ" FT CDS 219174..221627 FT /transl_table=11 FT /locus_tag="CBO0183" FT /product="putative pyridine nucleotide-disulphide FT oxidoreductase" FT /note="Similar to Fusobacterium nucleatum coenzyme a FT disulfide reductase/ disulfide bond regulator domain fn1903 FT SWALL:Q8RHU1 (EMBL:AE010492) (810 aa) fasta scores: E(): FT 1e-163, 56.35 38d in 818 aa, and to Fusobacterium nucleatum FT subsp. vincentii ATCC 49256 coenzyme a disulfide reductase/ FT disulfide bond regulator domain fnv2089 SWALL:Q7P7P1 FT (EMBL:AABF01000012) (809 aa) fasta scores: E(): 2.7e-159, FT 55.5 38d in 818 aa" FT /db_xref="GOA:A5HY76" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR001455" FT /db_xref="InterPro:IPR001763" FT /db_xref="InterPro:IPR003787" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:A5HY76" FT /protein_id="CAL81735.1" FT /translation="MNKKVLIIGGVAGGASAAARLRRLDDNAQIIMFERGEHISFANCG FT LPYYIGETIKERDNLLVQTPEAMMGRFNIDVRVNSEVISINTREKKVKVNSKEKGLYEE FT TYDYIIMSPGATPIKPPIKGINSSKIFTLRNIPDTDRIKDYVDNKDVKSAVVVGGGYIG FT VEMAENLRERGINVVLVEAAPHILAPFDSDMVTFAEQELQDNGVGLILGDGVKSFEENN FT NKIKLSLQSGTELNADMIILAIGVKPDTEFLKGSSIEIGPRGHIIVDKHMKTNVEGIYA FT VGDAIEVVDYINENKTAIPLAGPANKQGRIAADNICELNSSYKGTQGTAIIKVFGLTGA FT STGNNERTLSKFNIPYEVVYTHSQSHASYYPGGTPISLKLIFDTKGKILGAQVFGYDGV FT DKRIDDIAIVIRFGGTIYDLEELELAYAPPYSSAKDPVNMLGFVAENVLTGKVETVLSK FT DIDNRDKDKVILLDVRDDIEIENGKIEGAIEIPINQLRNRLSEIPKDNEVWIYCQIGLR FT GYIAARILMANGYKVKNLNGGYKTYIMNKFIPEKINKMPEEKMKGNNETKEEVAETLEL FT DACGLSCPGPLMKVNNTVSEMNEGETLKVKASDPGFYVDIQSWCERTNNELLSVSKDKG FT IVKALIKKGKEKLQVDEKERKGKIKENDNKTLVVFSGDLDKAIASFVIANGAVAMGKKV FT TMFFTFWGLNILRKPEKTKIQKAFMDKMFASMMPRGSKKLKLSKMNMMGMGSKMIRKVM FT KNKNISSLEELIQSAIDSGINIVACQMSMDVMGIKEEELIDGVNIGGVGYYLGEAEDAN FT VNLFI" FT sig_peptide 219174..219222 FT /locus_tag="CBO0183" FT /note="probabilty 0.871, with cleavage site probability FT 0.703 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature 219183..220052 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 274.1, E-value FT 1.9e-79" FT /inference="protein motif:Pfam:PF00070" FT misc_feature 220158..220487 FT /note="Pfam match to entry PF02852 pyr_redox_dim, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation FT domain,score 41.2, E-value 2.4e-09" FT /inference="protein motif:Pfam:PF02852" FT misc_feature 220527..220808 FT /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like FT domain, score 46.6, E-value 5.9e-11" FT /inference="protein motif:Pfam:PF00581" FT misc_feature 220887..221102 FT /note="Pfam match to entry PF01206 UPF0033,Uncharacterized FT protein family UPF0033, score 48.2,E-value 1.9e-11" FT /inference="protein motif:Pfam:PF01206" FT misc_feature 220899..220937 FT /note="PS01148 Uncharacterized protein family UPF0033 FT signature." FT /inference="protein motif:ProSite:PS01148" FT CDS complement(221655..222509) FT /transl_table=11 FT /locus_tag="CBO0184" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved protein cac0641 SWALL:Q97LC1 FT (EMBL:AE007579) (264 aa) fasta scores: E(): 2.5e-49,52.98 FT 38d in 251 aa" FT /db_xref="InterPro:IPR018708" FT /db_xref="UniProtKB/TrEMBL:A5HY77" FT /protein_id="CAL81736.1" FT /translation="MNYNESYENNSKDWPIYKENSAEWLKEKSLLYDREVTCPVCGNIF FT KAKSIKTSSYRILKKDSDLFIRYSVINPYFYDVWVCNECGYAAMKRDFNKIRSFQINSV FT KEKITPTWIPKVYPEVYNIDIAIERFKLSLLNYVVIESPYSKKGFNSLKLAWMYRLKDD FT YEKEKLFLNEALESLKEAYSSEDFPIYGMDRYTAMYLIAELMRKAGNTEESLRWFSNVI FT TCPGISSRLKNLARDQKDLIKEEINEIDFTPIDPTPMEIDEIDNTKPQKGFLSRFLNKI FT KIL" FT misc_feature complement(221754..222425) FT /note="Pfam match to entry PF04460 DUF517, Protein of FT unknown function (DUF517), score 221.4, E-value 1.4e-63" FT /inference="protein motif:Pfam:PF04460" FT CDS 222666..223454 FT /transl_table=11 FT /locus_tag="CBO0185" FT /product="putative guanosine 3',5'-bis-pyrophosphate FT (ppGpp) synthesis/degradation protein" FT /note="Similar to Clostridium tetani GTP pyrophosphokinase FT ctc00336 SWALL:Q898V3 (EMBL:AE015937) (262 aa) fasta FT scores: E(): 8.5e-70, 77.86 38d in 262 aa" FT /db_xref="GOA:A5HY78" FT /db_xref="InterPro:IPR007685" FT /db_xref="UniProtKB/TrEMBL:A5HY78" FT /protein_id="CAL81737.1" FT /translation="MALGEWKTFLIPYKQAVEELKVKFRSIRKEYREKNEYSPIEFVTG FT RVKEISSILEKANKFNIPLDRISYEMEDIAGIRIMCQFTSDIEKVVELVRQRKDMQIIY FT EKDYITNVKNSGYRSYHMIIKYPVSMAEGQKEILAEFQIRTLAMNFWATIEHSLNYKYK FT HQIPKDIKLKLKSAADAASNLDKLMMEIKDEIKDAQKLFEVKSSLVSYIMDNILTLQSM FT GKIIDSNRYQEQLNKLIEEGEVFELNSLLKSTEKTIEMYK" FT misc_feature 222798..223157 FT /note="Pfam match to entry PF04607 RelA_SpoT, Region found FT in RelA / SpoT proteins, score 186.6, E-value 4.2e-53" FT /inference="protein motif:Pfam:PF04607" FT repeat_region 223523..223680 FT /note="possible intergenic repeat 2" FT CDS complement(223757..226198) FT /transl_table=11 FT /gene="leuS" FT /locus_tag="CBO0186" FT /product="leucyl-tRNA synthetase" FT /EC_number="6.1.1.4" FT /note="Similar to Escherichia coli leucyl-tRNA synthetase FT LeuS or b0642 SWALL:SYL_ECOLI (SWALL:P07813) (860 aa) fasta FT scores: E(): 4.7e-104, 40.67 38d in 858 aa, and to FT Clostridium tetani leucyl-tRNA synthetase LeuSor ctc00337 FT SWALL:SYL_CLOTE (SWALL:Q898V2) (812 aa) fasta scores: E(): FT 0, 76.26 38d in 813 aa" FT /db_xref="GOA:A5HY79" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002302" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:A5HY79" FT /protein_id="CAL81738.1" FT /translation="MGNYSTKIDEKWQKKWEENSLYKFNNKNLDKKLYVLEMFSYPSGS FT KLHAGHWFNYGPVDSWARFKRMQGYNVFQPMGFDAFGLPAENYAIKTGIHPKDSTFKNI FT ETMETQLKAMGAMFNWENEVITCSPDYYKWTQWLFLKLYEKGLAYKKKAPVNWCPSCNT FT VLANEQVLDGKCERCDSNVDKKNLEQWFLKITDYADELLEKLDELDWPEKTKAMQKHWI FT GKSVGAEVTFNVADSDLSFNVFTTRVDTLFGVTYVVLAPENDLVDKLTTPENKAEVESY FT KTQAKNQSDIERQSITREKTGVFSGSYAINPINGKKVPIWIGDYVLNTYGTGCVMAVPA FT HDERDFAFATKYNLPIERVIEGGDSLPYTEYGGMVNSGEFDGLLGNEAKEAVISKLESM FT NLGRKKINYRLRDWLVSRQRYWGAPIPIIYCEKCGTVEVPIEQLPVELPYNVEFSPDGK FT SPLGKCDDFINTTCPKCGGPAKREADTLDTFVCSSWYYLRYPDNNNEKDAFNPELINKM FT LPVDKYVGGPEHACMHLLYARFITKALRDMGYLNFDEPFLSLTHQGLILGPDGLKMSKS FT KGNTISPDDYIKEFGADVFRMYLMFGFDYTEGGAWSDDAIKSIGKFVDRVERILENARE FT EIKNSKDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQFNTSIARLMEFTNALSKYLGI FT DAIKNALFLRESIIDFITLLAPFAPHFAEEQWKLIGINSSIFNEKWPEFDPKALIKDEV FT EIAVQVNGKIRAKINISTSSSEDEIKESALNNEDIKNSIGDKEIKKVIVIKNRLVNIVA FT K" FT misc_feature complement(224363..226168) FT /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA FT synthetases class I (I, L, M and V), score 457.3, E-value FT 1.3e-134" FT /inference="protein motif:Pfam:PF00133" FT misc_binding complement(226272..226492) FT /locus_tag="CBO0187" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS complement(226575..226979) FT /transl_table=11 FT /locus_tag="CBO0187" FT /product="putative exported protein" FT /note="Similar to Nitrosomonas europaea putative FT transmembrane protein ne2212 SWALL:Q82SU2 (EMBL:BX321863) FT (140 aa) fasta scores: E(): 4.3e-05, 25.83 38d in 120 FT aa,and to Pseudomonas aeruginosa hypothetical protein FT Pa5130 pa5130 SWALL:Q9HU54 (EMBL:AE004926) (139 aa) fasta FT scores: E(): 7.6e-05, 29.16 38d in 120 aa" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:A5HY80" FT /protein_id="CAL81739.1" FT /translation="MNSKIREKFLFYSLFVVLLTSILLIPIYSAKAYKNISPEEIKHII FT STPYSTAIIIDVRTPKEFSNGHIPKSLNIPLDKFKDTMLSKNIDKNTKIIIYSNTSVRA FT KNASNLLNSLGFNNVYVLDHLNSWSYPLEY" FT misc_feature complement(226587..226871) FT /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like FT domain, score 55.9, E-value 9e-14" FT /inference="protein motif:Pfam:PF00581" FT sig_peptide complement(226880..226979) FT /locus_tag="CBO0187" FT /note="probabilty 0.999, with cleavage site probability FT 0.290 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT tRNA complement(227165..227239) FT /gene="tRNA Gln (CTG)" FT /note="Cove score 73.28" FT /inference="nucleotide motif:tRNAscanSE" FT CDS complement(227293..227817) FT /transl_table=11 FT /locus_tag="CBO0188" FT /product="putative membrane protein" FT /note="Similar to Staphylococcus epidermidis cell shape FT determinant MreD se1331 SWALL:Q8CNZ6 (EMBL:AE016748) (173 FT aa) fasta scores: E(): 0.34, 22.36 38d in 161 aa, and to FT Clostridium tetani heptaprenyl diphosphate synthase FT component I ctc01025 SWALL:Q896H9 (EMBL:AE015939) (181 aa) FT fasta scores: E(): 0.13, 25.97 38d in 154 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY81" FT /protein_id="CAL81740.1" FT /translation="MKTTPLKSSNIAKGGVFTAISFLLIYLSTILPVNKLSLLATASAI FT IPIAIISTNAKNGFLVYLSTSILCSIVVGISRISVIFYIVFFGLYGIIKYYIERLNKLY FT IEIILKFAFFNICLIVLLYIYKLFFQGITIINKYIYMYFIVAQIAFIVFDYVLTLFIFY FT INKHFIKNIKP" FT misc_feature complement(order(227326..227394,227431..227499, FT 227542..227610,227629..227697,227725..227793)) FT /note="5 probable transmembrane helices predicted for FT CBO0188 by TMHMM2.0 at aa 9-31, 41-63, 70-92, 107-129 and FT 142-164" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(227682..227817) FT /locus_tag="CBO0188" FT /note="probabilty 0.990, with cleavage site probability FT 0.761 between residues 44 and 45" FT /inference="protein motif:SignalP:2.0" FT CDS complement(227842..228441) FT /transl_table=11 FT /locus_tag="CBO0189" FT /product="DnaJ-related protein" FT /note="Similar to Clostridium acetobutylicum molecular FT chaperone, DNAJ family cac0648 SWALL:Q97LB4 (EMBL:AE007580) FT (195 aa) fasta scores: E(): 1.6e-36,55.15 38d in 194 aa" FT /db_xref="GOA:A5HY82" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR003095" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR013105" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5HY82" FT /protein_id="CAL81741.1" FT /translation="MNPYEILGINKNASKEEIQQAYRKLAKKYHPDQYGNNPLRDLAEQ FT KMREINEAYDYLMKNNNSQSYNSNNYNGSYNSHSSNDYASIRADIDRGNISSAEQKLNS FT INVRNAEWYYLMGRVNYSKGWYDVAYNYFNNAYSLDPSNFEYRDALDKMSRNNSSYRKP FT YYSERRSDPDMCKICGTLYCIDCCCECCGGDFISCC" FT misc_feature complement(228232..228438) FT /note="Pfam match to entry PF00226 DnaJ, DnaJ domain,score FT 85.4, E-value 1.2e-22" FT /inference="protein motif:Pfam:PF00226" FT CDS complement(228428..229303) FT /transl_table=11 FT /locus_tag="CBO0190" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized protein, homolog of thermotoga maritima FT cac0649 SWALL:Q97LB3 (EMBL:AE007580) (283 aa) fasta scores: FT E(): 6.7e-52, 52.51 38d in 278 aa, and to Thermotoga FT maritima hypothetical protein Tm1805 tm1805 SWALL:Q9X2C5 FT (EMBL:AE001818) (272 aa) fasta scores: E(): 1.4e-10, 35.03 FT 38d in 294 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY83" FT /protein_id="CAL81742.1" FT /translation="MFGYVTPCKMELKIKEYEKFRAYYCGLCKTIKKDYGELPRITINY FT DMTFLGILLDSLEDNKNIFIKEHCIIHPIKKKVIITDNEALKYAAFFNVALSYYKLLDN FT VEDDNSIKSNISSKFLKKYIYKNNDLYEKHIHTVDNSLKNLYICEKNYENKSIDEISHH FT FAHLTGYILSSYKNFSFKDSLYWLGYNLGKWIYIIDAFDDLEKDINENKFNVINNIYNK FT NNLNYKEFRDSIKDKIDFLLINCASACLNNFNNMPIVKNKGLLYNILQFGLMEKMERVL FT KGVNINNESL" FT CDS complement(229307..229846) FT /transl_table=11 FT /locus_tag="CBO0191" FT /product="putative adenylate cyclase" FT /note="Similar to Clostridium acetobutylicum adenilate FT cyclase, class2 cac0650 SWALL:Q97LB2 (EMBL:AE007580) (180 FT aa) fasta scores: E(): 8.5e-37, 64.77 38d in 176 aa, and to FT Clostridium perfringens hypothetical protein Cpe1352 FT cpe1352 SWALL:Q8XKP2 (EMBL:AP003190) (187 aa) fasta scores: FT E(): 6.5e-36, 62.92 38d in 178 aa" FT /db_xref="GOA:A5HY84" FT /db_xref="InterPro:IPR008172" FT /db_xref="InterPro:IPR023577" FT /db_xref="UniProtKB/TrEMBL:A5HY84" FT /protein_id="CAL81743.1" FT /translation="MKEIETRIIKIDIEEIRKKLLDLGAIKVKEESQINNIYDFSDKKL FT LKNKGYARIRYIKDAIKNEEHYYMTVKKLISQEKYKVMEENETEILDFKEGEHIFKALG FT LELIESISKFRESYKYKETLVEIDINDKSFCPFPYIELESNNEEELEELVELLGYSMND FT TTSKTIYEILNEEKVK" FT misc_feature complement(229322..229846) FT /note="Pfam match to entry PF01928 CYTH, CYTH domain,score FT 103.8, E-value 3.6e-28" FT /inference="protein motif:Pfam:PF01928" FT CDS 230135..231172 FT /transl_table=11 FT /locus_tag="CBO0192" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00340 SWALL:Q898U9 (EMBL:AE015937) (366 aa) fasta FT scores: E(): 2e-83, 66.37 38d in 345 aa, and to Clostridium FT acetobutylicum hypothetical protein Cac0651 cac0651 FT SWALL:Q97LB1 (EMBL:AE007580) (345 aa) fasta scores: E(): FT 3.2e-82, 62.31 38d in 345 aa" FT /db_xref="GOA:A5HY85" FT /db_xref="InterPro:IPR007358" FT /db_xref="UniProtKB/TrEMBL:A5HY85" FT /protein_id="CAL81744.1" FT /translation="MEYIKEVNINEAIIHILDNNSEEPILNEYKLRLDDEIYKFILKHV FT DRCLKDEELKYAIFNEERNIVKELSQEYLNGQNDLLDVSKELARQLFILMKGNDNISSC FT DLMIVSISTEYGPMLAILKMDYVKNYIHVVDMVEDKIDIDIVPEFTGLPASAQKIQKCA FT FIKPIREDQEFNLMVIDKQKKSKDSEEYGSNYFISKYLGCKIVENERDATKNFVKATEK FT WAKSNLNENADTSEKIIRTVNKLLKEEDTINVKEVSNNIFGENPDIKLNYEGFISEQGV FT RDKVSIDKEWVDKKFKRIRVKIDKDIDLYIDEESYHDESRFEVKRVGDGSVNIMIKNVY FT NYMQK" FT CDS complement(231446..232372) FT /transl_table=11 FT /locus_tag="CBO0193" FT /product="putative fructose-1,6-bisphosphate aldolase" FT /EC_number="4.1.2.13" FT /note="Similar to Entamoeba histolytica putative FT fructose-1,6-bisphosphate aldolase Ald SWALL:Q8MTW2 FT (EMBL:AY057996) (326 aa) fasta scores: E(): 5.8e-51, 49.2 FT id in 315 aa, and to Clostridium tetani FT fructose-bisphosphate aldolase ctc00341 SWALL:Q898U8 FT (EMBL:AE015937) (320 aa) fasta scores: E(): 3.3e-80,76.75 FT 38d in 314 aa" FT /db_xref="GOA:A5HY86" FT /db_xref="InterPro:IPR000771" FT /db_xref="InterPro:IPR011289" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5HY86" FT /protein_id="CAL81745.1" FT /translation="MALVTTKEMFKKAYEGKYAIGAFNINNMEILQGVVNSAKAANSAV FT ILQVSAGALKYAGPKYLKAMVDAAIADTGIDVALHLDHGASLDVVKLAVESGFTSVMFD FT GSHYDYEENVAKTKEVVEYAHSHGVVVEAELGVLAGVEDDVQSDVHIYTDPEQAVDFVN FT RTGVDSLAIAIGTSHGAYKFAGEAQLRFDILEEIQSKLPGYPIVLHGASSVDPESVDTC FT NKYGGEIKGAKGVPADMLRKASSMAVCKINMDTDLRLAMTAGIRKVLSEDPKQFDPRKY FT LGEGRARIEKIVEDKIKNVLGSADSLK" FT misc_feature complement(231452..232369) FT /note="Pfam match to entry PF01116 FT F_bP_aldolase,Fructose-bisphosphate aldolase class-II, FT score 406.8,E-value 2.1e-119" FT /inference="protein motif:Pfam:PF01116" FT CDS complement(232598..232882) FT /transl_table=11 FT /locus_tag="CBO0194" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1349 SWALL:Q8XKP5 (EMBL:AP003190) (144 aa) fasta FT scores: E(): 8e-10, 37.77 38d in 90 aa, and to Clostridium FT acetobutylicum hypothetical protein Cac0670 SWALL:Q97L92 FT (EMBL:AE007582) (126 aa) fasta scores: E(): 2.1e-07, 31.57 FT 38d in 95 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY87" FT /protein_id="CAL81746.1" FT /translation="MNQCNELEELVSSQSWEKAYGKSLELFNDWQDNNFVISMVTNHSE FT IDNINIELWKLTQYVKCESEDESLASIHAVKFLLEHIMQMEKINIKNIV" FT CDS complement(232999..233667) FT /transl_table=11 FT /locus_tag="CBO0195" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00342 SWALL:Q898U7 (EMBL:AE015937) (225 aa) fasta FT scores: E(): 3.4e-51, 63.06 38d in 222 aa, and to FT Clostridium acetobutylicum ortholog yrbg, yete, ykja,ydfs, FT ydfr b.subtilis cac0671 SWALL:Q97L91 (EMBL:AE007582) (224 FT aa) fasta scores: E(): 1e-47, 58.82 38d in 221 aa" FT /db_xref="InterPro:IPR007353" FT /db_xref="InterPro:IPR023090" FT /db_xref="UniProtKB/TrEMBL:A5HY88" FT /protein_id="CAL81747.1" FT /translation="MFIVLIRTIILYLLVILSMRLMGKKQIGELEPFELAITIMISELA FT SLPMQDSRIPLLHGIVPILTLLIVQTMLSIVQLKSEKLRSIITGEPSLLIENGKINFRE FT LKNQRFSINDMMEELRLQGYYDLQSVEYAILETSGQLSIIPKTEESPVTKKDLSLQTTQ FT ERLPVTLILDGKINRKNLKLIKKDEQWLKNKLEKYNISSYDKLLIAVLNSKGNLYYQKK FT " FT misc_feature complement(233044..233421) FT /note="Pfam match to entry PF04239 DUF421, Protein of FT unknown function (DUF421), score 183.3, E-value 4.1e-52" FT /inference="protein motif:Pfam:PF04239" FT misc_feature complement(order(233440..233508,233602..233661)) FT /note="2 probable transmembrane helices predicted for FT CBO0195 by TMHMM2.0 at aa 3-22 and 54-76" FT /inference="protein motif:TMHMM:2.0" FT CDS 233792..235450 FT /transl_table=11 FT /locus_tag="CBO0196" FT /product="putative kinase" FT /note="Similar to Clostridium tetani uridine kinase FT ctc00344 SWALL:Q898U6 (EMBL:AE015937) (552 aa) fasta FT scores: E(): 6.7e-122, 61.05 38d in 552 aa, and to FT Clostridium acetobutylicum fision threonyl-trna synthetase FT cac0672 SWALL:Q97L90 (EMBL:AE007582) (553 aa) fasta scores: FT E(): 4.3e-123, 61.84 38d in 553 aa" FT /db_xref="GOA:A5HY89" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR006083" FT /db_xref="InterPro:IPR018163" FT /db_xref="UniProtKB/TrEMBL:A5HY89" FT /protein_id="CAL81748.1" FT /translation="MEGLKLYMPNGSNILVSGDKTLYDVVKENKLQDNIPIVLGKIDEE FT YYELTSTVKKEGVFIPVDITDSMGLKTYVRTLQFIFIKAVLDLYPESTVVIEHSLGKGL FT YGEIHKTLSLNENDILKIKNRMNEIINKDIKIKKITVKKERAIEIFNEYKMKDKVRLLN FT HIPHEEVKLYELDGRYDYFYGPMAYSTGAIKNFDIMYYDPGFILRYPREKDPFNIPEFV FT EYKKLTKIFRETEKWAKILDVGDVGALNDKVVYGEIKDIIRVSEALHEKKIANIADMIY FT DKENIKMVLISGPSSSGKTTFANRLGIQLRVNALIPVPISLDNYFVNREDTPKDKNGDY FT DFESIDALDIDLFNEDLKHILNGEEVQIPTFNFKKGKREYDGKKIKLPKNGILIVEGIH FT GLNPILTREIPDKNKFKIYISALTQLNIDNHNRVSTTDVRIIRRLVRDYLSRGYKGEET FT LKMWPSIKRGEDRNIFVFQENADVMFNSTIVYELCILKKYALAELNKIDKNSTVHYEAT FT RLKSFLNFFKEVDMNLVPSNSILREFIGGSCFYEY" FT misc_feature 234653..235270 FT /note="Pfam match to entry PF00485 PRK,Phosphoribulokinase FT / Uridine kinase family, score 12.8,E-value 2e-08" FT /inference="protein motif:Pfam:PF00485" FT misc_feature 234668..234691 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 235588..235719 FT /transl_table=11 FT /locus_tag="CBO0197" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HY90" FT /protein_id="CAL81749.1" FT /translation="MELLYPDEYFLELLEENLYNFNKEGYDDLTVNIELDPSVDELD" FT CDS complement(235820..236341) FT /transl_table=11 FT /locus_tag="CBO0198" FT /product="CDP-diacylglycerol--serine FT O-phosphatidyltransferase" FT /EC_number="2.7.8.8" FT /note="Similar to Bacillus subtilis FT CDP-diacylglycerol--serine O-phosphatidyltransferase PssA FT or Pss or bsu02270 SWALL:PSS_BACSU (SWALL:P39823) (177 aa) FT fasta scores: E(): 5.7e-17, 39.15 38d in 166 aa, and to FT Clostridium tetani CDP-diacylglycerol--serine FT O-phosphatidyltransferase ctc00346 SWALL:Q898U4 FT (EMBL:AE015937) (175 aa) fasta scores: E(): 3.4e-45,70.17 FT 38d in 171 aa" FT /db_xref="GOA:A5HY91" FT /db_xref="InterPro:IPR000462" FT /db_xref="InterPro:IPR004533" FT /db_xref="UniProtKB/TrEMBL:A5HY91" FT /protein_id="CAL81750.1" FT /translation="MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGL FT MDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAPSILTFHIYNFSYLGILGYLLVLMF FT PIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLSYL FT MVSNVKLKKF" FT misc_feature complement(235829..236233) FT /note="Pfam match to entry PF01066 FT CDP-OH_P_transf,CDP-alcohol phosphatidyltransferase, score FT 61.0, E-value 2.6e-15" FT /inference="protein motif:Pfam:PF01066" FT misc_feature complement(order(235844..235903,235916..235984, FT 236021..236089,236255..236323)) FT /note="4 probable transmembrane helices predicted for FT CBO0198 by TMHMM2.0 at aa 7-29, 85-107, 120-142 and FT 147-166" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(236126..236194) FT /note="PS00379 CDP-alcohol phosphatidyltransferases FT signature." FT /inference="protein motif:ProSite:PS00379" FT CDS 236528..236944 FT /transl_table=11 FT /locus_tag="CBO0199" FT /product="conserved hypothetical membrane" FT /note="Similar to Clostridium acetobutylicum CBS domains FT cac0678 SWALL:Q97L84 (EMBL:AE007583) (142 aa) fasta scores: FT E(): 4e-24, 54.81 38d in 135 aa, and to Clostridium tetani FT inosine-5-monophosphate dehydrogenase related protein FT ctc00347 SWALL:Q898U3 (EMBL:AE015937) (143 aa) fasta FT scores: E(): 4.3e-25, 57.97 38d in 138 aa" FT /db_xref="GOA:A5HY92" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5HY92" FT /protein_id="CAL81751.1" FT /translation="MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDNNKVVG FT VITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVEDN FT QNIVGIVSLGDIAIEPKHENEAQKALSGISEQNN" FT misc_feature 236540..236698 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 68.9, E-value 1.1e-17" FT /inference="protein motif:Pfam:PF00571" FT misc_feature 236732..236890 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 62.9, E-value 7.3e-16" FT /inference="protein motif:Pfam:PF00571" FT CDS 237050..237934 FT /transl_table=11 FT /locus_tag="CBO0200" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani BmrU protein or FT ctc00349 SWALL:Q898U2 (EMBL:AE015937) (315 aa) fasta FT scores: E(): 5.3e-81, 71.23 38d in 292 aa, and to FT Clostridium acetobutylicum unsharacterized protein, bmru FT family cac0679 SWALL:Q97L83 (EMBL:AE007583) (295 aa) fasta FT scores: E(): 1.2e-78, 68.83 38d in 292 aa" FT /db_xref="GOA:A5HY93" FT /db_xref="InterPro:IPR001206" FT /db_xref="InterPro:IPR005218" FT /db_xref="UniProtKB/TrEMBL:A5HY93" FT /protein_id="CAL81752.1" FT /translation="MSKVKFIYNPYSGEKAIISQIDKVIRIHQKYGYEVVPYRISLEYD FT LDDAFKSIDESYKYILVAGGDGTVDNVVNHLKKFSIDLPIAILPTGTANDFAKFIGMPT FT NVGEACEQILKSSVKKIDLGKINDKYFINVASTGLFTDVSQKTDVNLKNTMGKLAYYVK FT GLEQLPNFRRLKVNVRSEEVNFDGDMYLMMVFNGQTAGNLHMAYKAEVDDGMLDVIIIK FT ACAIKDMIGLFIKMIRGDHLEDVNALIYFKTNKLEIESNEEIVTDIDGERGPDFPLQIE FT CVKEGLDILGILD" FT misc_feature 237227..237364 FT /note="Pfam match to entry PF00781 DAGKc, Diacylglycerol FT kinase catalytic domain (presumed), score 36.1, E-value FT 7.1e-10" FT /inference="protein motif:Pfam:PF00781" FT CDS 238008..238652 FT /transl_table=11 FT /locus_tag="CBO0201" FT /product="putative membrane protein" FT /note="Similar to Clostridium acetobutylicum predicted FT membrane protein cac0680 SWALL:Q97L82 (EMBL:AE007583) (216 FT aa) fasta scores: E(): 2.9e-10, 27.06 38d in 218 aa" FT /db_xref="UniProtKB/TrEMBL:A5HY94" FT /protein_id="CAL81753.1" FT /translation="MINLFIYISAILLMFIICMQGGKATFKAPRKIKIISIIIYFLMIL FT KFISLTLLVFVNNIRNLYWLKWIYFLDFLAIPICILICFYICIKNNKFNLNYIIFIIVL FT ITSILIFFMTKYSLKINMFNSQYYIMELLTPINMYVFFIFVNLIFLILCLIKHNNKYIN FT KNILYLMFFSTIVNISDIILSFLNINILPPNILGNIIWIYTLYTAVNKLIR" FT sig_peptide 238008..238077 FT /locus_tag="CBO0201" FT /note="probabilty 0.730, with cleavage site probability FT 0.253 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(238017..238070,238107..238175,238203..238271, FT 238290..238358,238401..238469,238506..238565, FT 238575..238634) FT /note="7 probable transmembrane helices predicted for FT CBO0201 by TMHMM2.0 at aa 4-21, 34-56, 66-88, FT 95-117,132-154, 167-186 and 190-209" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(238744..240681) FT /transl_table=11 FT /locus_tag="CBO0202" FT /product="putative radical SAM protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1196 cpe1196 SWALL:Q8XL46 (EMBL:AP003189) (662 FT aa) fasta scores: E(): 5.7e-150, 59.93 38d in 644 aa, and FT to Thermotoga maritima hypothetical protein Tm0337 tm0337 FT SWALL:Q9WYH2 (EMBL:AE001714) (558 aa) fasta scores: E(): FT 1.4e-99, 48.82 38d in 553 aa" FT /db_xref="GOA:A5HY95" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013704" FT /db_xref="InterPro:IPR022946" FT /db_xref="InterPro:IPR023404" FT /db_xref="InterPro:IPR024560" FT /db_xref="UniProtKB/TrEMBL:A5HY95" FT /protein_id="CAL81754.1" FT /translation="MSNMDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGR FT VLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLVNSGNIDSMVNHYTASKKKRHDDFY FT SPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSILED FT SSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEV FT STNKKSYAEAYKIQYYEQDSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYAR FT TYHPMYEAEGGIPAIKEVKFSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANM FT MTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSL FT LRKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNL FT MGKPTRNVYDSFVKKYYDINKKIHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTP FT EQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQRALLQFSIHDNYDLVKE FT ALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKK FT NSLSKHKKRK" FT misc_feature complement(239173..239775) FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 17.4, E-value 0.015" FT /inference="protein motif:Pfam:PF04055" FT misc_binding 240906..241073 FT /locus_tag="CBO0203" FT /bound_moiety="unknown" FT /note="ykoK riboswitch" FT CDS 241276..242541 FT /transl_table=11 FT /locus_tag="CBO0203" FT /product="putative magnesium binding ptotein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1323 SWALL:Q8XKS1 (EMBL:AP003190) (423 aa) fasta FT scores: E(): 3.9e-69, 50.47 38d in 418 aa" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR006668" FT /db_xref="InterPro:IPR007903" FT /db_xref="UniProtKB/TrEMBL:A5HY96" FT /protein_id="CAL81755.1" FT /translation="MKKLQSFFLSKIINKKVYDEYGDYIGKLIDIYVTSEDDYPRAIAY FT KIKKGREVVNYEFKNISFYDDEGKAIIKVIGTRDIILRKYSYLLSQHLLNKQIIDINGK FT KMVKVHDLRIGEIAGEYKVIAVDTGALALSRRVGMENLLRSIYKIFNKKIEDTLIMWDS FT VESLEMVNNNLKLSVSYQKLSTLHPADLADIIEDMNDSYRKLVFESLDDDLAADTFEEI FT DLEVKTEMLEEMTSSKKAEIIYNMSKDEAADILAQMKEEEVEQILSIMEERDAKDIRKL FT MGYKEETAGSIMNKDFISFNVNITAEETIDLLREIKPKDEEAYYIYIVDEKEQLKGAIS FT LTDLIICTPGAKLKDIMDKDIVKVKDTDHINEAVELAIKYDLLSIPVIEGENKLCGTIS FT IDDIIEDVFAPMWRKKVKIVAV" FT misc_feature 241285..241515 FT /note="Pfam match to entry PF05239 PRC, PRC-barrel FT domain,score 25.7, E-value 0.00011" FT /inference="protein motif:Pfam:PF05239" FT misc_feature 241756..242142 FT /note="Pfam match to entry PF03448 MgtE_N, MgtE FT intracellular domain, score 124.2, E-value 2.5e-34" FT /inference="protein motif:Pfam:PF03448" FT misc_feature 242146..242322 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 25.5, E-value 0.00013" FT /inference="protein motif:Pfam:PF00571" FT misc_feature 242338..242499 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 43.6, E-value 4.6e-10" FT /inference="protein motif:Pfam:PF00571" FT CDS 242771..243466 FT /transl_table=11 FT /gene="sleB" FT /locus_tag="CBO0204" FT /product="spore cortex-lytic enzyme precursor" FT /note="Similar to Bacillus cereus spore cortex-lytic enzyme FT precursor SleB or bc2753 SWALL:SLEB_BACCR (SWALL:P70874) FT (259 aa) fasta scores: E(): 1.6e-25, 42.85 id in 259 aa, FT and to Clostridium tetani spore-cortex-lytic enzyme FT precursor ctc00350 SWALL:Q898U1 (EMBL:AE015937) (255 aa) FT fasta scores: E(): 5e-62, 65.93 38d in 229 aa" FT /db_xref="GOA:A5HY97" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR011105" FT /db_xref="InterPro:IPR014224" FT /db_xref="UniProtKB/TrEMBL:A5HY97" FT /protein_id="CAL81756.1" FT /translation="MRKNIYLKRAIIYVLAIMLAYGSTTLYILPYTNATKAVAYYYGHR FT GDIISQVQRKLKAWGYYNGGVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLVALGIN FT TGSSGSSSSSNNQDVMLLARLINGEARGEPYEGQVAVGAVVLNRTRDSKFPNTIAGVIY FT EPLAFTAIADGQINAQMQQTSINAARDALNGWDPSDGATYYFNPATATSSWIWSRPLIK FT VIGKHRFCR" FT sig_peptide 242771..242876 FT /gene="sleB" FT /locus_tag="CBO0204" FT /note="probabilty 0.945, with cleavage site probability FT 0.363 between residues 36 and 37" FT /inference="protein motif:SignalP:2.0" FT misc_feature 242804..242872 FT /note="1 probable transmembrane helix predicted for CBO0204 FT by TMHMM2.0 at aa 12-34" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 242903..243085 FT /note="Pfam match to entry PF01471 PG_binding_1, Putative FT peptidoglycan binding domain, score 76.4, E-value 6.1e-20" FT /inference="protein motif:Pfam:PF01471" FT misc_binding 243545..243800 FT /gene="cysK1" FT /locus_tag="CBO0205" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 243830..244744 FT /transl_table=11 FT /gene="cysK1" FT /locus_tag="CBO0205" FT /product="cysteine synthase 1" FT /EC_number="2.5.1.47" FT /note="Also similar to CBO0205 (53.5 38d)." FT /db_xref="GOA:A5HY98" FT /db_xref="InterPro:IPR000634" FT /db_xref="InterPro:IPR001216" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR005856" FT /db_xref="InterPro:IPR005859" FT /db_xref="UniProtKB/TrEMBL:A5HY98" FT /protein_id="CAL81757.1" FT /translation="MLYGNSIDLIGNTPMFKLNNMQEENMADVYIKLEKFNPGGSIKDR FT AALGMIEEAEKMGKIKPGDIIVEPTSGNTGIGLAMVGRLKGYKVIIVMPDSMSIERRNM FT IKAYGAELVLTEGNKGMTGAIEKAEELARDKKGYFIPQQFSNRANSKKHYETTAVEILK FT DVEDLDAFVASVGTGGTIAGIGRRLKEFNKNIKVVAVEPHNSPVISGGKAAPHKIQGIG FT AGFIPDVYEKDVVDDVMTITDEESYEYARRFGAEEGILVGISSGANIAAAIKIAKKLGK FT GKKVVTVAPDGGEKYISTGLYDK" FT misc_feature 243845..244705 FT /note="Pfam match to entry PF00291 PALP,Pyridoxal-phosphate FT dependent enzyme, score 426.6, E-value 2.3e-125" FT /inference="protein motif:Pfam:PF00291" FT misc_feature 243923..243979 FT /note="PS00901 Cysteine synthase/cystathionine FT beta-synthase P-phosphate attachment site." FT /inference="protein motif:ProSite:PS00901" FT misc_feature 243929..243970 FT /note="PS00165 Serine/threonine dehydratases FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00165" FT CDS 244759..245355 FT /transl_table=11 FT /gene="cysE" FT /gene_synonym="cysA" FT /locus_tag="CBO0206" FT /product="serine acetyltransferase" FT /EC_number="2.3.1.30" FT /note="Similar to Bacillus subtilis serine FT acetyltransferase CysE or CusA or bsu00930 SWALL:CYSE_BACSU FT (SWALL:Q06750) (217 aa) fasta scores: E(): 4.3e-35, 61.07 FT 38d in 167 aa, and to Clostridium tetani serine FT acetyltransferase ctc00351 SWALL:Q898U0 (EMBL:AE015937) FT (186 aa) fasta scores: E(): 2.6e-47,74.45 38d in 184 aa" FT /db_xref="GOA:A5HY99" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR005881" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/TrEMBL:A5HY99" FT /protein_id="CAL81758.1" FT /translation="MKNPFKVLIYDLKNAKEKDPAARNILEVFILYPFIHALIGYRIAH FT LFYKAHLFFLARLISQISRFFTGIEIHPGATIGKGLFIDHGMGVVIGETAEVGDNVTLY FT HGVTLGGTGKDKGKRHPTVGNNVIIGSGAKVLGPINIGDNVKIGANAVVLRHVPANATA FT VGIPAKVVRYEKKSSVIEIRDYNGVKKVIYNDMII" FT misc_feature 244819..244887 FT /note="1 probable transmembrane helix predicted for CBO0206 FT by TMHMM2.0 at aa 21-43" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 244960..245013 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 8.7,E-value FT 8.6" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 245020..245073 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 16.5,E-value FT 0.066" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 245116..245169 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 10.7,E-value FT 3.8" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 245143..245229 FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT /inference="protein motif:ProSite:PS00101" FT misc_feature 245170..245223 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 13.7,E-value FT 0.48" FT /inference="protein motif:Pfam:PF00132" FT CDS 245377..246342 FT /transl_table=11 FT /locus_tag="CBO0207" FT /product="putative iron-sulfur cluster-binding protein" FT /note="Similar to Clostridium tetani iron-sulfur FT cluster-binding protein ctc00352 SWALL:Q898T9 FT (EMBL:AE015937) (327 aa) fasta scores: E(): 2.3e-75,61.12 FT 38d in 319 aa" FT /db_xref="GOA:A5HYA0" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR013542" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5HYA0" FT /protein_id="CAL81759.1" FT /translation="MNCKESVKEYCRNLGLNLIGFTKCRIFHELIPELTERKNENRQNE FT FEGKDINKRVDPFQYMKEGKTIISIAFPYLFNLGHKHDVYFSKYTQGRDYHTVVNEYLQ FT KISNFIQSKGYRAEYFVDSNDLPERYIAYLCGIGFIGKNNMLITEKYGSYVFLGEIITD FT MEIDEDEPMECKCEECNICLRACPTNSLEHKDPNICLSYITQKKNIEDDWFNKLKGRMF FT GCDTCQRVCPYNRNINTSNIEGFKTFDFMENLDLEELIYVNNKEFKEKYKLTSCGWRGK FT SILQRNALINCITMNKDVDIQGKNIKSPYVLDYYHRLLKK" FT misc_feature 245881..245952 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 9.8, E-value 0.0074" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 245902..245937 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 246490..247191 FT /transl_table=11 FT /gene="plsD" FT /locus_tag="CBO0208" FT /product="probable acyltransferase" FT /note="Similar to Clostridium butyricum FT sn-glycerol-3-phosphate acyltransferase plsD SWALL:O32330 FT (EMBL:AF009362) (234 aa) fasta scores: E(): 9e-45, 56.65 id FT in 233 aa" FT /db_xref="GOA:A5HYA1" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/TrEMBL:A5HYA1" FT /protein_id="CAL81760.1" FT /translation="MISPTMIKIIGHMPKGFLKFLSRKVLNRYINKYANLKINGKENLK FT NIDKPIIFISNHLSNSDALVINKALEDQDITFIAGVKLKDNSLTKLGLEITKTIPIKPN FT TADKEAIYNIVKTLKSGNNILIFPEGTRSRTAKLMEPKKGVVLIQKLSKATIVPLGISG FT TEKLLPINDKDMALECFQSADVTINIGRALELPKKNKEESKHEYEDRLMDYFMSEIAKL FT IPKEYRGIYNN" FT misc_feature 246592..246975 FT /note="Pfam match to entry PF01553 FT Acyltransferase,Acyltransferase, score 96.7, E-value FT 4.7e-26" FT /inference="protein motif:Pfam:PF01553" FT CDS 247284..247925 FT /transl_table=11 FT /gene="nth" FT /locus_tag="CBO0209" FT /product="endonuclease III" FT /note="Similar to Paenibacillus polymyxa End3 ntH FT SWALL:Q9LCR1 (EMBL:AB003153) (224 aa) fasta scores: E(): FT 2e-35, 46.26 38d in 214 aa, and to Clostridium perfringens FT endonuclease III cpe1318 SWALL:Q8XKS6 (EMBL:AP003190) (209 FT aa) fasta scores: E(): 2.2e-47, 63.5 38d in 200 aa" FT /db_xref="GOA:A5HYA2" FT /db_xref="InterPro:IPR000445" FT /db_xref="InterPro:IPR003265" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR003651" FT /db_xref="InterPro:IPR004035" FT /db_xref="InterPro:IPR004036" FT /db_xref="InterPro:IPR005759" FT /db_xref="InterPro:IPR011257" FT /db_xref="InterPro:IPR023170" FT /db_xref="UniProtKB/TrEMBL:A5HYA2" FT /protein_id="CAL81761.1" FT /translation="MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDK FT KVNEITKELFKEYSTPKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQV FT PNDFNDLTSLPGVGRKTANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQL FT QQAIPKELWILMHHVLIFHGRRCCVARKPKCEECTIKKYCKYYNEEIKPS" FT misc_feature 247383..247796 FT /note="Pfam match to entry PF00730 HhH-GPD, HhH-GPD FT superfamily base excision DNA repair protein, score FT 67.1,E-value 4e-17" FT /inference="protein motif:Pfam:PF00730" FT misc_feature 247578..247667 FT /note="Pfam match to entry PF00633 HHH,Helix-hairpin-helix FT motif, score 27.1, E-value 4.3e-05" FT /inference="protein motif:Pfam:PF00633" FT misc_feature 247587..247676 FT /note="PS01155 Endonuclease III family signature." FT /inference="protein motif:ProSite:PS01155" FT misc_feature 247830..247895 FT /note="Predicted helix-turn-helix motif with score FT 1213.000, SD 3.32 at aa 183-204, sequence FT GRRCCVARKPKCEECTIKKYCK" FT misc_feature 247842..247892 FT /note="PS00764 Endonuclease III iron-sulfur binding region FT signature." FT /inference="protein motif:ProSite:PS00764" FT CDS 248077..249249 FT /transl_table=11 FT /locus_tag="CBO0210" FT /product="NAD-dependent malic enzyme" FT /EC_number="1.1.1.38" FT /note="Similar to Bacillus stearothermophilus NAD-dependent FT malic enzyme SWALL:MAOX_BACST (SWALL:P16468) (478 aa) fasta FT scores: E(): 7e-79, 59.38 38d in 389 aa,and to Clostridium FT tetani NAD-dependent malic enzyme ctc00356 SWALL:Q898T6 FT (EMBL:AE015937) (389 aa) fasta scores: E(): 6.1e-102, 73.52 FT 38d in 389 aa" FT /note="Also similar to CBO0246 (66.6 38d)" FT /db_xref="GOA:A5HYA3" FT /db_xref="InterPro:IPR001891" FT /db_xref="InterPro:IPR012301" FT /db_xref="InterPro:IPR012302" FT /db_xref="InterPro:IPR015884" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5HYA3" FT /protein_id="CAL81762.1" FT /translation="MDIKEKSLMVHKKFKGKLSIEGKIQVKNKEDLSIAYTPGVAEPCV FT KINEDKSLVYEYTMKGNTVAVVTNGTAVLGLGDIGPYAGLPVMEGKALLFKEFADIDSF FT PICIDSKDSEEIIKTVKLIAPGFGGINLEDIKAPECFYIEKKLKEELDIPVFHDDQHGT FT AIVVLAGIYNALRLVGKKLEEARIVINGAGSAGISICKLLLQAGVKNIIMCDKEGSLVK FT GNSNLNEAQKLIVEVTNKENEKGTLKDIIKGKDVFIGVSAPNILTEEMVNAMNKDSIVF FT AMANPTPEIMPDKAKKAGARVVATGRSDFPNQINNVLVFPGIFRGALDVRSKVINEEMK FT LAASKAIASLVQDNELNEEYIIPGAFDKRVAEVVAEEVKKVALKMGLSKL" FT misc_feature 248122..248550 FT /note="Pfam match to entry PF00390 malic, Malic FT enzyme,N-terminal domain, score 267.2, E-value 2.2e-77" FT /inference="protein motif:Pfam:PF00390" FT misc_feature 248554..249225 FT /note="Pfam match to entry PF03949 malic_N, Malic FT enzyme,NAD binding domain, score 396.2, E-value 3.3e-116" FT /inference="protein motif:Pfam:PF03949" FT misc_feature 249034..249111 FT /note="PS00217 Sugar transport proteins signature 2." FT /inference="protein motif:ProSite:PS00217" FT CDS complement(249276..250505) FT /transl_table=11 FT /locus_tag="CBO0211" FT /product="putative molybdopterin binding" FT /note="Similar to Bacillus subtilis cina-like protein CinA FT or bsu16930 SWALL:CINA_BACSU (SWALL:P46323) (416 aa) fasta FT scores: E(): 6.2e-57, 44.92 38d in 394 aa, and to FT Clostridium acetobutylicum competence-damage inducible FT protein, cina cac3586 SWALL:Q97D94 (EMBL:AE007855) (411 aa) FT fasta scores: E(): 1.3e-92, 60.29 38d in 408 aa" FT /db_xref="GOA:A5HYA4" FT /db_xref="InterPro:IPR001453" FT /db_xref="InterPro:IPR008135" FT /db_xref="InterPro:IPR008136" FT /db_xref="InterPro:IPR020817" FT /db_xref="UniProtKB/TrEMBL:A5HYA4" FT /protein_id="CAL81763.1" FT /translation="MKAEILCVGTELLLGDIVNTNAQYISKELANIGIEVYHHSVIGDN FT ENRLLKELERAFNYCDLVITTGGLGPTKDDLTKESVAKFFQEDLVLHEKSLKQIEKRLL FT CFNKSMTESNKKQAYFPKNCEILENPNGTAPGFIIEKDNKIAIILPGPPYEMQPMFENK FT VIPYLEKLTNSTIKSKVLRITGIGESDVADLISDILESQTNPTVAPYAKQGETTLRITA FT KANSEEKALNLIVPIEKEIRQILGDNIYGSGETSLEEVVANILVKRNLTIATAESCTGG FT LLAGKLINFPGISSVFLEGAITYSNESKINRLNVKKETLEKYTAVSKEVALEMAEGIAK FT SAGTNIGISTTGVAGPGGGTYDKPIGLIYIGLYINGKTFVKELNYSGNRQFIRNITVTR FT ALDFLRRNLK" FT misc_feature complement(249282..249746) FT /note="Pfam match to entry PF02464 CinA,Competence-damaged FT protein, score 217.2, E-value 2.5e-62" FT /inference="protein motif:Pfam:PF02464" FT misc_feature complement(249372..249395) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(250008..250505) FT /note="Pfam match to entry PF00994 MoCF_biosynth, Probable FT molybdopterin binding domain, score 49.1, E-value 1e-11" FT /inference="protein motif:Pfam:PF00994" FT CDS complement(250531..251514) FT /transl_table=11 FT /locus_tag="CBO0212" FT /product="putative exported protein" FT /note="Similar to Clostridium acetobutylicum predicted FT hydrolase from alpha/beta family, yqkd b.subtilis ortholog FT cac2725 SWALL:Q97FL1 (EMBL:AE007770) (330 aa) fasta scores: FT E(): 1.2e-61, 50.31 38d in 318 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYA5" FT /protein_id="CAL81764.1" FT /translation="MYHTANIKNTKTKKYKILFLIPILIILIAINAIGFYNGNLIYVMA FT CIEPTSRNSTNMYDIYKSTFDERRFNTLKKENITINSKYGYTLKGTYMENPHKTKNSVV FT IVHGIRSSRWESMKYADLYLDKGFNVLIYDSRYHGLSGGSDVTYGYYEKYDLDQCIDWL FT ERKNPGGIIGAHGESLGASTILLHSKMNLSKNRVKFYVADCPYSNLEELLKNKLNEELH FT INNKIITDSLLFYSGACALLKSKFLYSSVSPIDSIKTVQTPIMFIHGDKDIYIPKKMSE FT EMYNIKPGIKEIYIAPNAGHAQAYLYNKKEYRKNLYKFIDKYVKIN" FT misc_feature complement(251407..251466) FT /note="1 probable transmembrane helix predicted for CBO0212 FT by TMHMM2.0 at aa 17-36" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(251409..251514) FT /locus_tag="CBO0212" FT /note="probabilty 0.839, with cleavage site probability FT 0.299 between residues 34 and 35" FT /inference="protein motif:SignalP:2.0" FT CDS complement(251624..252658) FT /transl_table=11 FT /locus_tag="CBO0213" FT /product="putative glutamyl-aminopeptidase" FT /EC_number="3.4.11.7" FT /note="Similar to Lactococcus lactis FT glutamyl-aminopeptidase PepA SWALL:PEPA_LACLC FT (SWALL:Q48677) (355 aa) fasta scores: E(): 4.4e-08, 23.21 FT id in 336 aa, and to Clostridium acetobutylicum FT endoglucanase, aminopeptidase m42 family cac0690 FT SWALL:Q97L72 (EMBL:AE007584) (343 aa) fasta scores: E(): FT 2.2e-89, 65.78 38d in 342 aa" FT /db_xref="GOA:A5HYA6" FT /db_xref="InterPro:IPR008007" FT /db_xref="InterPro:IPR023367" FT /db_xref="UniProtKB/TrEMBL:A5HYA6" FT /protein_id="CAL81765.1" FT /translation="MDYHKKLILNYLKNILTIPSPTGFTNHITNYLKKELDTIGIEYKI FT TNKGSIIITLEGEDKSFERTLSAHMDTLGAMVKDINDNGTLSIVPLGGFMMNSIEGENC FT SIHTLNDEVYSGTIQTIKPSVHIHGKEAYDLKRSPENMEVILDEKIFSKKDIENLNINI FT GDFISFDTRNIFTENGFIKSRHLDDKASLAILLYAIKYIHVNNLPLSCTTNFLFSNYEE FT VGHGASYIPKNTKEFIAVDMGAPGENQNSSEYSVCICAKDSTGPYDLDFRKKLINICKT FT SNIPYKIDIYPSYGSDASAALKAGFDIKAALIGPGVYASHAYERTHMDSILATLDLIIK FT YCVS" FT misc_feature complement(251648..252514) FT /note="Pfam match to entry PF05343 Peptidase_M42, M42 FT glutamyl aminopeptidase, score 379.5, E-value 3.6e-111" FT /inference="protein motif:Pfam:PF05343" FT CDS 252810..253946 FT /transl_table=11 FT /locus_tag="CBO0214" FT /product="putative exported protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved protein, vanw of enterococcus FT faecalis related cac0691 SWALL:Q97L71 (EMBL:AE007584) (411 FT aa) fasta scores: E(): 4e-53, 44.75 38d in 362 aa, and to FT Clostridium tetani vancomycin b-type resistance protein FT vanw vanw or ctc00360 SWALL:Q898T2 (EMBL:AE015937) (467 aa) FT fasta scores: E(): 3.3e-61, 49.33 38d in 377 aa" FT /note="Also similar to the downstream CDS, CBO0215 (48 id) FT and CBO0820 (45 38d)" FT /db_xref="InterPro:IPR007391" FT /db_xref="InterPro:IPR022029" FT /db_xref="UniProtKB/TrEMBL:A5HYA7" FT /protein_id="CAL81766.1" FT /translation="MVRSRKDRRKKESKPMKIALITLSVVILLTLSAFTTYQYNNIKYY FT NNLIYPGVSVEGVDLSGKTKEEAKKIVQEKYWNKLLSKNINVKAKDKTYTLKYSDLKPT FT SNLDNVLKDAEAYGKNLIIFKRYSLIKNKTPKNYSINFKYDKKVIESLMSKIEKDVNIS FT PIDASLASNGGGFSVISHKNGEKLDKDKLKKDLIPKINNDISSDITEKAVMKTVTPRIT FT EDKLQGVGRMIGSYSSHYGSISSSQRANNIVTSTSAINGKILMPGDVFSFNGVVGERTA FT EKGYQAAPIIVGEKMENGLGGGVCQVSSTLFNAVAGSKLQSIERSHHTKPVHYVPQGMD FT ATVDYGNIDYKFRNNLQSPIYIEAYTSNGNVVFNLYSK" FT misc_feature 252810..252857 FT /note="PS00063 Aldo/keto reductase family putative active FT site signature." FT /inference="protein motif:ProSite:PS00063" FT sig_peptide 252810..252906 FT /locus_tag="CBO0214" FT /note="probabilty 1.000, with cleavage site probability FT 0.523 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 252867..252926 FT /note="1 probable transmembrane helix predicted for CBO0214 FT by TMHMM2.0 at aa 20-39" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 252978..253001 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 253464..253937 FT /note="Pfam match to entry PF04294 VanW, VanW like protein, FT score 222.9, E-value 4.8e-64" FT /inference="protein motif:Pfam:PF04294" FT CDS 254151..255503 FT /transl_table=11 FT /locus_tag="CBO0215" FT /product="putative exported protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved protein, vanw of enterococcus FT faecalis related cac0691 SWALL:Q97L71 (EMBL:AE007584) (411 FT aa) fasta scores: E(): 3.4e-55, 42.72 38d in 433 aa, and to FT Clostridium tetani vancomycin b-type resistance protein FT vanw vanw or ctc00360 SWALL:Q898T2 (EMBL:AE015937) (467 aa) FT fasta scores: E(): 7.3e-69, 45.59 38d in 454 aa" FT /note="Also similar to the upstream CDS, CBO0214 (48 38d) FT and CBO0820 (47 38d)" FT /db_xref="GOA:A5HYA8" FT /db_xref="InterPro:IPR007391" FT /db_xref="InterPro:IPR011098" FT /db_xref="InterPro:IPR022029" FT /db_xref="UniProtKB/TrEMBL:A5HYA8" FT /protein_id="CAL81767.1" FT /translation="MKNRKAKRILIFIFLLMSILFGVFYYIYKEVSGFDSVIYPGVFIE FT GIDLTAKTKNEAKNIIESKYSKVIVRKNITISWNDKKYNLSYAKLNPRYNIQETIDNAY FT SYGKNLSIFSKYKIIKSKSIQNYLLKFSYDKKAMDRFIDSIERDINKEAENAKINVNKG FT SISIVQDKKGFKLEKDKLKKILYSKMDGKNLKDINEKAPVKTQEAKIKKKQLETVNSNI FT SSYTTNYGSISSPQRANNIVISTKAINGTLLMPGESFSFNNTVGPRTEKRGYQGAPVII FT GNKIESGLGGGICQVSGTLYNAMLKANINATERVRHTFPSTYVPIGMDATIDYGNIDYK FT FKNTLTYPIYIEGITNGANVTFNIYSNSSLKNKTYNISSEIYETITPKEQYIDDASIPL FT GKTEIVQEAHTGYKVKVYKSTVENDSVVKKELLYTDFYKPVDKIIKRGTKK" FT sig_peptide 254151..254223 FT /locus_tag="CBO0215" FT /note="probabilty 0.998, with cleavage site probability FT 0.564 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 254175..254234 FT /note="1 probable transmembrane helix predicted for CBO0215 FT by TMHMM2.0 at aa 9-28" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 254757..255245 FT /note="Pfam match to entry PF04294 VanW, VanW like protein, FT score 226.0, E-value 5.7e-65" FT /inference="protein motif:Pfam:PF04294" FT misc_feature 255333..255356 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 255650..256657 FT /transl_table=11 FT /gene="splB" FT /gene_synonym="spl" FT /locus_tag="CBO0216" FT /product="spore photoproduct lyase" FT /EC_number="4.1.99.-" FT /note="Similar to Bacillus subtilis spore photoproduct FT lyase SplB or Spl or bsu13930 SWALL:SPL_BACSU FT (SWALL:P37956) (342 aa) fasta scores: E(): 1.4e-52, 45.23 FT id in 336 aa, and to Clostridium acetobutylicum spore FT photoproduct lyase, SplB cac0699 SWALL:Q97L63 FT (EMBL:AE007585) (336 aa) fasta scores: E(): 4.5e-71,54.92 FT 38d in 335 aa" FT /db_xref="GOA:A5HYA9" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR023897" FT /db_xref="UniProtKB/TrEMBL:A5HYA9" FT /protein_id="CAL81768.1" FT /translation="MFIPKTVIFEEKALEYVRGKEILKELKNKNIEIKYSKTGRVTGQR FT DKTPNEMYSEGKDTLVIGIRKSLDFQSCKPSAHYQLPLVSGCMGMCEYCYLNTQMGKRP FT YTKVYVNTEEILNKAEKYSRERLPEITVFEGAATSDPIPVEPYTHSLKDTIEFFGQKHN FT MKFRFVTKFTDVNSLVHLNHNRNTTIRFSINTDNIIRNFEHRTPLVIDRLKAAEKIAKA FT GYSLGFIIAPVFIYRGWEKEYLDLLKNINIMFKGVPVEFEVISHRFTKRAKDNILSVFS FT NTTLPMVEENRKFKYGQFGYGKYIYKDEELQNIKKFFRDSITKFFGEDNINYII" FT misc_feature 255890..256390 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 28.8, E-value 1.4e-05" FT /inference="protein motif:Pfam:PF04055" FT CDS 256785..257252 FT /transl_table=11 FT /locus_tag="CBO0217" FT /product="putative RNA methylase" FT /note="Similar to Bacillus subtilis CspR SWALL:Q45512 FT (EMBL:U58864) (157 aa) fasta scores: E(): 2.6e-31, 53.79 id FT in 158 aa, and to Clostridium acetobutylicum predicted FT tRNA-methylase cac0700 SWALL:Q97L62 (EMBL:AE007585) (160 FT aa) fasta scores: E(): 5.7e-53, 83.11 38d in 154 aa" FT /db_xref="GOA:A5HYB0" FT /db_xref="InterPro:IPR001537" FT /db_xref="InterPro:IPR016914" FT /db_xref="UniProtKB/TrEMBL:A5HYB0" FT /protein_id="CAL81769.1" FT /translation="MSLNIVLFQPEIPQNTGNIARTCVLTNSRLHLIKPLGFSLDEKHL FT RRAGLDYWQYLDLSIYESYEELREKYKDSNFYFSTTHGNNFYTDVKYSDGDFIVFGRES FT SGLPDEIRDSDPSKCIRVPMINTTTRSLNLSNTVAVVTYEALRQVGFPDMK" FT misc_feature 256788..257213 FT /note="Pfam match to entry PF00588 SpoU_methylase, SpoU FT rRNA Methylase family, score 136.3, E-value 5.8e-38" FT /inference="protein motif:Pfam:PF00588" FT CDS 257265..258104 FT /transl_table=11 FT /locus_tag="CBO0218" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani degv protein degv or FT ctc00368 SWALL:Q898S4 (EMBL:AE015937) (280 aa) fasta FT scores: E(): 1.1e-66, 65.71 38d in 280 aa, and to FT Clostridium acetobutylicum hypothetical upf0230 protein FT Cac0701 SWALL:Y701_CLOAB (SWALL:Q97L61) (279 aa) fasta FT scores: E(): 5.9e-59, 60.21 38d in 279 aa" FT /db_xref="InterPro:IPR003797" FT /db_xref="UniProtKB/TrEMBL:A5HYB1" FT /protein_id="CAL81770.1" FT /translation="MEKIKIITDSTADLPKDIIEKYDIEVIPLFVSFGDKVYKDGVDIK FT LEQLFTKIEKENVFPQTSQVNPQRFYEHYKKYIDKGYSIISIHISSKMSGTYQSACLAK FT DMLDSDNITVIDSNNVTSGLGLLVIKACKLKDEGLSMEEIVKGVKETIPHIKSVLAFET FT LDYLVKGGRLSKTAGFIGNVLGIKPILAVENGEMVVKDKVRGSKKAIRAIFEYIGKLGL FT KQGEPCILLHVQNKDILGTLRENLNQDEANFIECTVGCVVGIYAGPRACGIFFIEDY" FT misc_feature 257478..258098 FT /note="Pfam match to entry PF02645 DUF194, Uncharacterized FT protein, DegV family COG1307, score 260.5, E-value 2.3e-75" FT /inference="protein motif:Pfam:PF02645" FT CDS 258398..259501 FT /transl_table=11 FT /locus_tag="CBO0219" FT /product="putative lipoprotein" FT /note="Similar to Listeria monocytogenes cd4+ T FT cell-stimulating antigen precursor tcsa or lmo1388 FT SWALL:TCSA_LISMO (SWALL:Q48754) (357 aa) fasta scores: E(): FT 1.4e-30, 41.09 38d in 365 aa, and to Clostridium tetani FT membrane lipoprotein TmpC precursor TmpC or ctc00369 FT SWALL:Q898S3 (EMBL:AE015937) (359 aa) fasta scores: E(): FT 2e-65, 56.09 38d in 369 aa" FT /db_xref="GOA:A5HYB2" FT /db_xref="InterPro:IPR003760" FT /db_xref="UniProtKB/TrEMBL:A5HYB2" FT /protein_id="CAL81771.1" FT /translation="MKKKKIIALLATAVMAVSLFAGCGSKDSAGEKSADKKEKIKIGLS FT TDEGGLNDKSFNQSADAGVKKAQKELNVDYKPIESKQKEDYESNLEALVNDGSNLTFGI FT GYQMEQAMTNVAKKYPDKNFAIVDTDKVTQPNVQCLTFKDHEGSFLMGVIAGKMTKTNK FT VGFIGGKDSAAINKFEVGFIAGVKSVNPEAAKGLIGTKDKAGAMVKYADSFTDTNKGYE FT LGKSLYGAGCDVVYHAAGGVGIGLFKSAKELNKPDKRIWAIGVDEDQAVKVSEYADIIL FT SSMIKRVDAATFNATKEVVDGTFKGGKHIELGLKEDGVGIAPTSNKNTSKETLDLVQKY FT KEAIKEGKIKVPATREELVKFTPTEIK" FT sig_peptide 258398..258482 FT /locus_tag="CBO0219" FT /note="probabilty 1.000, with cleavage site probability FT 0.306 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 258431..259462 FT /note="Pfam match to entry PF02608 Bmp, Basic membrane FT protein, score 270.6, E-value 2.1e-78" FT /inference="protein motif:Pfam:PF02608" FT misc_feature 258434..258466 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 259685..261217 FT /transl_table=11 FT /locus_tag="CBO0220" FT /product="ABC-transporter, ATP-binding protein" FT /note="Similar to Clostridium acetobutylicum sugar FT ABC-transporter, ATP-ase component cac0703 SWALL:Q97L59 FT (EMBL:AE007585) (514 aa) fasta scores: E(): 1.5e-128,75.78 FT 38d in 508 aa" FT /db_xref="GOA:A5HYB3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HYB3" FT /protein_id="CAL81772.1" FT /translation="MEKVIEMKGITKVFPGTVANDDVSFDLNKSETHVLLGENGAGKTT FT LMNVLYGLYQPEKGQIFVNGKEVKILGPNDAIKQGIGMVHQHFMLVHNFTVAENIVLGI FT EPRKGLKIDINKAIKDVEKISKKYGFSIDPNAIIEDISVGQQQKVEILKALYRGAEILI FT LDEPTAVLTPQEIDELGVIIDNLKKQGKSIILITHKLKEVMKMSDRVTIIRRGKITGIV FT NTKETNIDQLAEFMVGRKVNLQMDKKPQNLGKEVLKVEDLQAKDRRGVNVLKGVNLSVR FT EGEIVGIAGVDGNGQSEFIEVLTGLRKADAGSINLNEEEIFNKSSRQIIDKGVGHIPED FT RHKRGLILKYSLYENSVLGKHHKAPFSKGIVMDYKAIRRHCNELIEEFDVRTPNDEVNA FT SALSGGNQQKLIAAREISKDPNLLIASQPTRGLDVGAIEYIHKRLVAERDNGKAVLLVS FT LELDEILSLSDRIAVMYDGKIIEILDRKDATEQKLGVLMAGGKLEDTRKEVK" FT misc_feature 259772..260332 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 167.4, E-value 2.5e-47" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 259793..259816 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 260105..260149 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature 260531..261115 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 75.6, E-value 1.1e-19" FT /inference="protein motif:Pfam:PF00005" FT CDS 261219..262322 FT /transl_table=11 FT /locus_tag="CBO0221" FT /product="ABC transporter, permease protein" FT /note="Similar to Clostridium acetobutylicum sugar ABC FT transporter, permease protein cac0704 SWALL:Q97L58 FT (EMBL:AE007585) (365 aa) fasta scores: E(): 1.9e-88,64.94 FT 38d in 368 aa" FT /db_xref="GOA:A5HYB4" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:A5HYB4" FT /protein_id="CAL81773.1" FT /translation="MSENNKKRTISNGLINVLKSLAFPLGAIVISIFVSVFFVMWAKGY FT SITQYFSAFSDLFTTIWQGSFGDKRKTLETMIYVTPLIFTGVANAIAFRCGLFNIGVEG FT QFIVGMISAAVLGLIPGLNPVVHGILIILGGIVAGSIWGGIPGYLKAKVGTNEVINTIM FT MNYLGLYLGNYIILRSRFSVKSSASTPIIQKSAQLLRFSSTSRASISLIIGIVFAIFVY FT WLLWKTTVGYEIRAVGFNPSGAEYGGINVAKNTILAMVLSGAIAGIGGATHVAGVMHQA FT QDMMVLPGFGFDGIAVALLAKNNPIGCIASAILFGALNSSSKMLQLNGIPKQIVYLVQS FT IIIIFVATDYIVKYFSEKKNRKVLING" FT sig_peptide 261219..261348 FT /locus_tag="CBO0221" FT /note="probabilty 0.645, with cleavage site probability FT 0.373 between residues 44 and 45" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(261276..261344,261444..261497,261516..261584, FT 261594..261653,261690..261749,261837..261896, FT 261984..262052,262218..262286) FT /note="8 probable transmembrane helices predicted for FT CBO0221 by TMHMM2.0 at aa 20-42, 76-93, 100-122, FT 126-145,158-177, 207-226, 256-278 and 334-356" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 261429..262259 FT /note="Pfam match to entry PF02653 FT BPD_transp_2,Branched-chain amino acid transport system / FT permease component, score 177.3, E-value 2.7e-50" FT /inference="protein motif:Pfam:PF02653" FT CDS 262315..263241 FT /transl_table=11 FT /locus_tag="CBO0222" FT /product="ABC transporter, permease protein" FT /note="Similar to Clostridium acetobutylicum sugar ABC FT transporter, permease protein cac0705 SWALL:Q97L57 FT (EMBL:AE007585) (310 aa) fasta scores: E(): 5.9e-82,70.64 FT 38d in 310 aa" FT /db_xref="GOA:A5HYB5" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:A5HYB5" FT /protein_id="CAL81774.1" FT /translation="MDSLIIIGLVTATLRTATPLVFAGLGGVFSERAGVVNIGLEGMMV FT MGAFFSVYGTYLTGSPLVGIVFAIVAGALIALLHAFLSISLKADQVISGTAINLFSSAL FT ASFLIFKIFKKGGQTDIVKALAYNVPASVKSIPIIGPILSGINWFVIIALILVFISHYI FT LFKTPVGLRIRAVGEHPKAADTLGINVYKVRYLCVMLSGALAGLGGAALIGITPVYREG FT MVAGRGFIALAAMIFGNWKPFGTMFACLLFAFGGSFEIFAQGFSWNLPSEFYSSIPYIL FT TMLALAGFVGKTTPPAADGQPYEKNSR" FT misc_feature order(262324..262392,262411..262470,262498..262566, FT 262585..262653,262738..262806,262900..262968, FT 262981..263034,263053..263121,263131..263184) FT /note="9 probable transmembrane helices predicted for FT CBO0222 by TMHMM2.0 at aa 4-26, 33-52, 62-84, FT 91-113,142-164, 196-218, 223-240, 247-269 and 273-290" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 262339..263172 FT /note="Pfam match to entry PF02653 FT BPD_transp_2,Branched-chain amino acid transport system / FT permease component, score 176.5, E-value 4.6e-50" FT /inference="protein motif:Pfam:PF02653" FT CDS 263353..264078 FT /transl_table=11 FT /locus_tag="CBO0223" FT /product="probable polysaccharide deacetylase" FT /EC_number="3.-.-.-" FT /note="Similar to Bacillus subtilis probable polysaccharide FT deacetylase PdaA precursor PdaA or bsu07980 FT SWALL:PDAA_BACSU (SWALL:O34928) (263 aa) fasta scores: E(): FT 1.1e-13, 34.95 38d in 206 aa, and to Clostridium FT perfringens probable endo-1,4-beta-xylanase cpe1477 FT SWALL:Q8XKC3 (EMBL:AP003190) (238 aa) fasta scores: E(): FT 8.6e-33, 44.58 38d in 240 aa" FT /db_xref="GOA:A5HYB6" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:A5HYB6" FT /protein_id="CAL81775.1" FT /translation="MKKFLGKISISLILLLCLSTSYVYAFNEESKADNNSKENKTIYLT FT FDDGPSTNTNKVLDTLNEYNVKATFFLIGNQIKDQEEVVKRTQDEGHSIGLHTYTHDFK FT KIYSNNQTFIDEMLKCQEEIYRVTGTRPNIIRFPGGSVKRLNKGFKKELEEKHFKVYDW FT NVDCQDGMKPKMSPNRIFKKATESNVKDEPIILLMHCDYMQKNTCKALPEIIKFYKDKG FT YEFKTINNETPECYFPLRK" FT sig_peptide 263353..263446 FT /locus_tag="CBO0223" FT /note="probabilty 1.000, with cleavage site probability FT 0.449 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature 263455..263835 FT /note="Pfam match to entry PF01522 FT Polysacc_deacet,Polysaccharide deacetylase, score 140.8, FT E-value 2.6e-39" FT /inference="protein motif:Pfam:PF01522" FT CDS 264407..265780 FT /transl_table=11 FT /gene="rpoN" FT /gene_synonym="ntrA" FT /gene_synonym="hno" FT /locus_tag="CBO0224" FT /product="RNA polymerase sigma-54 factor" FT /note="Similar to Alcaligenes eutrophus RNA polymerase FT sigma-54 factor RpoN or NtrA or Hno SWALL:RP54_ALCEU FT (SWALL:P28615) (493 aa) fasta scores: E(): 6.6e-36, 33.6 id FT in 494 aa, and to Clostridium tetani RNA polymerase FT sigma-54 factor RpoN or ctc00376 SWALL:Q898R6 FT (EMBL:AE015937) (461 aa) fasta scores: E(): 2.6e-87,60.47 FT 38d in 463 aa" FT /db_xref="GOA:A5HYB7" FT /db_xref="InterPro:IPR000394" FT /db_xref="InterPro:IPR007046" FT /db_xref="InterPro:IPR007634" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYB7" FT /protein_id="CAL81776.1" FT /translation="MNMNFGLSLTQEQKLIMTQQMQLSIKLLQMSTYELQQYVEKEVQE FT NPVLDSQNIHKEDKGIEDINYKKLIKHLEDNGNEYGSYSSYNKEEETSPFNFISNEKSL FT KEYLQEQIIELNENKYIKSICIYIIENIDDKGYLSVRDEEISEELKVPLHSIEEAIDIV FT QSLEPDGIGARNLKECLKIQLKKKSINNSKICEIIDNFLPLVAENRYNVISKKLSISIK FT KAQEYGDVIKTLQPKPSRGFYTGDEVKYIVPDAYIKKIDNEYYIIMNEELLPKLTVNNL FT YKDIVLNDTDENAVEFVKEKLNSAIFLIKSIENRKSTIYRVLEKILEIQRDYFDLGIKF FT LKPMTLKEIADSLGMHESTISRAIRDKYINTNRGTILIKDLFTTGITANNSTGEDISVE FT FIKREIKELIDKEDKKKPISDQIICNILNNKGIQISRRTVAKYREELGIQSSKCRKRF" FT misc_feature 264416..264565 FT /note="Pfam match to entry PF00309 sigma54_AID, Sigma-54 FT factor, Activator interacting domain (AID), score FT 65.6,E-value 1.1e-16" FT /inference="protein motif:Pfam:PF00309" FT misc_feature 264671..265255 FT /note="Pfam match to entry PF04963 sigma54_CBD, Sigma-54 FT factor, core binding domain, score 105.7, E-value 9.5e-29" FT /inference="protein motif:Pfam:PF04963" FT misc_feature 265289..265774 FT /note="Pfam match to entry PF04552 sigma54_DBD, FT Sigma-54,DNA binding domain, score 249.7, E-value 4.1e-72" FT /inference="protein motif:Pfam:PF04552" FT misc_feature 265433..265492 FT /note="PS00717 Sigma-54 factors family signature 1." FT /inference="protein motif:ProSite:PS00717" FT misc_feature 265436..265501 FT /note="Predicted helix-turn-helix motif with score FT 2571.000, SD 7.94 at aa 344-365, sequence FT MTLKEIADSLGMHESTISRAIR" FT misc_feature 265712..265735 FT /note="PS00718 Sigma-54 factors family signature 2." FT /inference="protein motif:ProSite:PS00718" FT CDS 266068..267099 FT /transl_table=11 FT /gene="cggR" FT /locus_tag="CBO0225" FT /product="central glycolytic genes regulator" FT /note="Similar to Bacillus megaterium central glycolytic FT genes regulator CggR SWALL:CGGR_BACME (SWALL:P35168) (342 FT aa) fasta scores: E(): 8.9e-45, 43.49 38d in 338 aa, and to FT Thermoanaerobacter tengcongensis transcriptional regulator, FT contains sigma factor-related N-terminal domain DeoR2 or FT tte1763 SWALL:Q8R963 (EMBL:AE013129) (340 aa) fasta scores: FT E(): 1e-59, 55.58 38d in 340 aa" FT /db_xref="GOA:A5HYB8" FT /db_xref="InterPro:IPR007324" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYB8" FT /protein_id="CAL81777.1" FT /translation="MEDILKLQQKIVPEMLKLLEKRYNILRTIYYKQPIGRRVLANDLE FT IGERIVRTEINFLKSQSLIDINSSGMTVTKEGEEIIDRLKSFIHEVKGLKEIESILKNK FT LEIFEVIIVPGNLDEDITVKNELGKAAANYLKNIVQDKDIIALTGGSTVKEVVDNMPKI FT NTLKDAVVVPARGGIGRDVELQANTLVANLASKINANYKLMHVQDNLSEAALKAVMEEK FT SIKEVLDMIHKVNILIHGIGIAEVMATRRGIPSEEIAYIEEKKAVAEAFGYYFDMKGNI FT VHSSPTIGIKRESIRNANKLIAVSGGKKKAKAILAAEVRNKNSVLITDEGAAREIINIL FT ENE" FT misc_feature 266332..267081 FT /note="Pfam match to entry PF04198 Sugar-bind, Putative FT sugar-binding domain, score 274.6, E-value 1.3e-79" FT /inference="protein motif:Pfam:PF04198" FT CDS 267177..268184 FT /transl_table=11 FT /gene="gap1" FT /locus_tag="CBO0226" FT /product="glyceraldehyde 3-phosphate dehydrogenase" FT /EC_number="1.2.1.12" FT /note="Similar to Bacillus megaterium glyceraldehyde FT 3-phosphate dehydrogenase Gap SWALL:G3P_BACME FT (SWALL:P23722) (334 aa) fasta scores: E(): 4.3e-78, 64.86 FT id in 333 aa, and to Bacillus stearothermophilus FT glyceraldehyde 3-phosphate dehydrogenase Gap FT SWALL:G3P_BACST (SWALL:P00362) (334 aa) fasta scores: E(): FT 4.1e-82, 69.06 38d in 333 aa" FT /note="Also similar to CBO1095 (66.26 38d)" FT /db_xref="GOA:A5HYB9" FT /db_xref="InterPro:IPR006424" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020828" FT /db_xref="InterPro:IPR020829" FT /db_xref="InterPro:IPR020830" FT /db_xref="InterPro:IPR020831" FT /db_xref="UniProtKB/TrEMBL:A5HYB9" FT /protein_id="CAL81778.1" FT /translation="MVKVAINGFGRIGRNVFKALVKNYKDQLQVVAINDLTSPATLAHL FT LKYDSLYGKFDGTVEAKETSIVVNGNEIKIFAERDPKNIDWNSTGAEIVIESTGLFTDG FT EKANAHLGGTVKKVLISAPAKNEDKTIVMGVNHEEYDPANHNIISNASCTTNCLAPFAK FT VLDENFGIESGLMTTIHAYTGDQRVLDAPHKDLRRARAAAESMIPTTTGAAKAVALVLP FT QLKGKLNGMAVRVPTPTVSLTDLVFTVKKDVTVEEINAALKKAAEGELKGILGYSEEPL FT VSIDYRGDERSSIVDALSTSVIDNRLVKVVSWYDNEYGYSHRLADLTKFVADRL" FT misc_feature 267180..267635 FT /note="Pfam match to entry PF00044 gpdh, Glyceraldehyde FT 3-phosphate dehydrogenase, NAD binding domain, score 317.3, FT E-value 1.9e-92" FT /inference="protein motif:Pfam:PF00044" FT misc_feature 267627..267650 FT /note="PS00071 Glyceraldehyde 3-phosphate dehydrogenase FT active site." FT /inference="protein motif:ProSite:PS00071" FT misc_feature 267636..268118 FT /note="Pfam match to entry PF02800 gpdh_C, Glyceraldehyde FT 3-phosphate dehydrogenase, C-terminal domain, score FT 395.2,E-value 6.6e-116" FT /inference="protein motif:Pfam:PF02800" FT CDS 268482..269678 FT /transl_table=11 FT /gene="pgK" FT /locus_tag="CBO0227" FT /product="phosphoglycerate kinase" FT /EC_number="2.7.2.3" FT /note="Similar to Bacillus megaterium phosphoglycerate FT kinase Pgk SWALL:PGK_BACME (SWALL:P24269) (394 aa) fasta FT scores: E(): 2.4e-80, 57.07 38d in 396 aa, and to FT Clostridium acetobutylicum phosphoglycerate kinase Pgk or FT cac0710 SWALL:PGK_CLOAB (SWALL:O52632) (397 aa) fasta FT scores: E(): 5.4e-110, 77.44 38d in 399 aa" FT /db_xref="GOA:A5HYC0" FT /db_xref="InterPro:IPR001576" FT /db_xref="InterPro:IPR015824" FT /db_xref="InterPro:IPR015901" FT /db_xref="InterPro:IPR015911" FT /db_xref="UniProtKB/Swiss-Prot:A5HYC0" FT /protein_id="CAL81779.1" FT /translation="MNYNKKSIEDIDVKGKKVLVRCDFNVPLNEGKITDENRLVGALPT FT IKYLMEKGAKIILCSHMGKPKGEPKKELSLLPVAKRLSEMLNKEVIFADDDNVVGENAK FT KAVEDMKDGDVVLLQNTRYRKEETKNEEVFSKELASLADVFVNDAFGTAHRAHCSTVGV FT TNYLKEAACGYLIQKELKFLGNAVEKPERPFVAILGGAKVSDKINVINNLLDKVDTLII FT GGGMGYTFLKAQGYTIGNSLVEEDKVEYSKEMIDKAKEKGVNLLLPIDNVVADKFDKDA FT SPVITEDQNIGEGYMGLDIGPKTAKIYSDAIKSAKTVVWNGPMGVFEFKSFANGTIEVA FT KAMADSDAVTIIGGGDSAAAVNILGFGDKMTHISTGGGASLEFLEGKELPGIAALNDK" FT misc_feature 268488..269675 FT /note="Pfam match to entry PF00162 PGK, Phosphoglycerate FT kinase, score 784.8, E-value 3.6e-233" FT /inference="protein motif:Pfam:PF00162" FT misc_feature 268530..268562 FT /note="PS00111 Phosphoglycerate kinase signature." FT /inference="protein motif:ProSite:PS00111" FT misc_feature 268545..268592 FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT /inference="protein motif:ProSite:PS00453" FT CDS 269740..270486 FT /transl_table=11 FT /gene="tpiA" FT /gene_synonym="tpi" FT /locus_tag="CBO0228" FT /product="triosephosphate isomerase" FT /EC_number="5.3.1.1" FT /note="Similar to Clostridium acetobutylicum FT triosephosphate isomerase TpiA or Tpi or cac0711 FT SWALL:TPIS_CLOAB (SWALL:O52633) (248 aa) fasta scores: E(): FT 8e-66, 73.79 38d in 248 aa, and to Bacillus megaterium FT triosephosphate isomerase TpiA or Tpi SWALL:TPIS_BACME FT (SWALL:P35144) (251 aa) fasta scores: E(): 8.1e-50, 57.61 FT 38d in 243 aa" FT /db_xref="GOA:A5HYC1" FT /db_xref="InterPro:IPR000652" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020861" FT /db_xref="InterPro:IPR022896" FT /db_xref="UniProtKB/TrEMBL:A5HYC1" FT /protein_id="CAL81780.1" FT /translation="MRTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVC FT LPAVLEEVKGSNIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNET FT DETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVI FT AYEPIWAIGTGKTATDEQANETIGYIRTVVKAMYGESVADKVRIQYGGSVKPGTIKAQM FT AKEEIDGALVGGASLKAEDFAAIVNY" FT misc_feature 269743..270480 FT /note="Pfam match to entry PF00121 TIM, Triosephosphate FT isomerase, score 445.6, E-value 4.6e-131" FT /inference="protein motif:Pfam:PF00121" FT misc_feature 270229..270261 FT /note="PS00171 Triosephosphate isomerase active site." FT /inference="protein motif:ProSite:PS00171" FT CDS 270578..272107 FT /transl_table=11 FT /gene="gpmI" FT /gene_synonym="pgm-I" FT /locus_tag="CBO0229" FT /product="2,3-bisphosphoglycerate-independent FT phosphoglycerate mutase" FT /EC_number="5.4.2.1" FT /note="Similar to Clostridium acetobutylicum FT 2,3-bisphosphoglycerate-independent phosphoglycerate mutase FT GpmI or Pgm-I or cac0712 SWALL:GPMI_CLOAB (SWALL:Q97L53) FT (510 aa) fasta scores: E(): 9.7e-149,74.75 38d in 511 aa, FT and to Bacillus megaterium FT 2,3-bisphosphoglycerate-independent phosphoglycerate mutase FT GpmI or Pgm SWALL:GPMI_BACME (SWALL:P35167) (511 aa) fasta FT scores: E(): 6.8e-108, 58.17 38d in 514 aa" FT /db_xref="GOA:A5HYC2" FT /db_xref="InterPro:IPR005995" FT /db_xref="InterPro:IPR006124" FT /db_xref="InterPro:IPR011258" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:A5HYC2" FT /protein_id="CAL81781.1" FT /translation="MSKKPVVLMILDGFGLTNKVDGNAVSAANKPNLDNILKKYPHTQL FT GASGMDVGLPEGQMGNSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIKNV FT KKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEY FT IEDIENYMNEIGVGEIATISGRYYAMDRDKRWERVQLCYNAIVLGKGEEANSAVEGLEK FT SYRDNKTDEFVLPSVVLKEGKPKAKIENKDSVVFFNFRPDRARELTRAINDKVFDGFER FT ETLDLTYVTMTEYDSTLENVEVAFPPEHLNNTLGEYVSKNGKKQLRIAETEKYAHVTFF FT FNGGVEEPNEGEDRVLIPSPKVATYDMQPEMNAYEVTDKLLERLDEDKYDMVILNFANP FT DMVGHTGVFEAAKKAIETVDECVGKIVNKVLEKDGTAFITADHGNSEEMIDYSTGKPMT FT AHTTNPVPFMYVSKNSKELREGGKLADIAPTMLQLMNLPKPSEMTGNSLIK" FT misc_feature 271685..272035 FT /note="Pfam match to entry PF01676 FT Metalloenzyme,Metalloenzyme superfamily, score 169.4, FT E-value 6.1e-48" FT /inference="protein motif:Pfam:PF01676" FT CDS 272163..273458 FT /transl_table=11 FT /gene="eno" FT /locus_tag="CBO0230" FT /product="enolase" FT /EC_number="4.2.1.11" FT /note="Similar to Bacillus subtilis enolase Eno or bsu33900 FT SWALL:ENO_BACSU (SWALL:P37869) (430 aa) fasta scores: E(): FT 1.6e-106, 70.49 38d in 427 aa, and to Clostridium tetani FT enolase ctc00382 SWALL:Q898R0 (EMBL:AE015937) (431 aa) FT fasta scores: E(): 3.8e-131,86.54 38d in 431 aa" FT /db_xref="GOA:A5HYC3" FT /db_xref="InterPro:IPR000941" FT /db_xref="InterPro:IPR020809" FT /db_xref="InterPro:IPR020810" FT /db_xref="InterPro:IPR020811" FT /db_xref="UniProtKB/TrEMBL:A5HYC3" FT /protein_id="CAL81782.1" FT /translation="MKNYIEIVDVYARQILDSRCNPTVEVEVELEDGTVGVAAVPSGAS FT TGAFEAVELRDGDKSKYLGKGVLKAVDNVNTIIADELVGMNVLDQVAIDKTMIELDGTD FT NKAKLGANAMLGVSLACAKAAANSLGISLYQYIGGVNGKVLPVPMMNIINGGKHADNNV FT DLQEFMIMPAGAPSFSEALRMCSEVYHALKSTLKAQGYDTGVGDEGGFAPNLKSNEEAI FT VVIIEAIKKAGYTPGEDIFIALDPASSEIFEDGKYNLAGEGRVLTPEEMANYYVELAEK FT YPIISIEDGMAEEDWDGWKILTEKIGNKVQLVGDDLFVTNTERLSKGIKLGVANSILIK FT LNQIGTLTETLNAIEMAERAGYTAVVSHRSGETEDTTIADLVVAVNAGQIKTGAPARSE FT RVAKYNQLLRIEEELNDMGEYRGLKAFYNINK" FT misc_feature 272178..272573 FT /note="Pfam match to entry PF03952 enolase_N, FT Enolase,N-terminal domain, score 236.6, E-value 3.7e-68" FT /inference="protein motif:Pfam:PF03952" FT misc_feature 272586..273449 FT /note="Pfam match to entry PF00113 enolase, FT Enolase,C-terminal TIM barrel domain, score 604.6, E-value FT 6.1e-179" FT /inference="protein motif:Pfam:PF00113" FT misc_feature 273171..273212 FT /note="PS00164 Enolase signature." FT /inference="protein motif:ProSite:PS00164" FT CDS 273681..273914 FT /transl_table=11 FT /gene="secG" FT /locus_tag="CBO0231" FT /product="probable protein-export membrane protein" FT /note="Similar to Bacillus subtilis probable protein-export FT membrane protein SecG or bsu33630 SWALL:SECG_BACSU FT (SWALL:O32233) (76 aa) fasta scores: E(): 9.3e-10, 49.29 FT 38d in 71 aa, and to Clostridium perfringens probable FT protein-export membrane protein SecG or cpe1297 FT SWALL:Q8XKU5 (EMBL:AP003190) (76 aa) fasta scores: E(): FT 4.7e-10, 44 38d in 75 aa" FT /db_xref="GOA:A5HYC4" FT /db_xref="InterPro:IPR004692" FT /db_xref="UniProtKB/TrEMBL:A5HYC4" FT /protein_id="CAL81783.1" FT /translation="MHTFSIVLLTIVSITLIVVVLMQPSKTNGLSGFMGGGSETFYSKN FT RTRTSESVLSRITVVCSILFAIIVLAQNLLSK" FT sig_peptide 273681..273759 FT /gene="secG" FT /locus_tag="CBO0231" FT /note="probabilty 0.996, with cleavage site probability FT 0.530 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature 273684..273911 FT /note="Pfam match to entry PF03840 SecG, Preprotein FT translocase SecG subunit, score 77.9, E-value 2.2e-20" FT /inference="protein motif:Pfam:PF03840" FT misc_feature order(273690..273743,273837..273905) FT /note="2 probable transmembrane helices predicted for FT CBO0231 by TMHMM2.0 at aa 4-21 and 53-75" FT /inference="protein motif:TMHMM:2.0" FT CDS 274123..276300 FT /transl_table=11 FT /gene="rnr" FT /gene_synonym="vacB" FT /locus_tag="CBO0232" FT /product="ribonuclease R" FT /EC_number="3.1.-.-" FT /note="Similar to Bacillus subtilis ribonuclease R Rnr or FT VacB or bsu33610 SWALL:RNR_BACSU (SWALL:O32231) (779 aa) FT fasta scores: E(): 1e-143, 54.55 38d in 702 aa, and to FT Clostridium acetobutylicum fusion ribonuclease and FT ribosomal protein S1 domain cac0715 SWALL:Q97L50 FT (EMBL:AE007586) (730 aa) fasta scores: E(): 2e-197, 72.08 FT id in 720 aa" FT /db_xref="GOA:A5HYC5" FT /db_xref="InterPro:IPR001900" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004476" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR011805" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013223" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:A5HYC5" FT /protein_id="CAL81784.1" FT /translation="MNIRETILAFMEEQAYKPMDIKELKQVFGVTKHEYKEFEKMLKDM FT EKDGQIVKTRTEHYGIPARMGLVLGKLQGHQKGFGFVIPEEEREDIFIPASSMNGAMHT FT DRVLAKITKESANGKRCEGEIIRILERGNKTVIGIYEDSKNFGFVVSDDKKIYQDIFIP FT KGDKNGAKTGQVVIAEIVTYPEKRRNPEGRVIEILGNKEDKGIDILTIIKKNKLPEEFP FT PKVQSYADNISEAIPEEEYKRREDLRDLTIVTIDGEDAKDLDDAISLEKLPNGNYYLGV FT HIADVSHYVKEKNPLDKEALKRATSVYLIDRVIPMLPKKLSNGICSLNPKIDRLTLSCF FT MEIDKNGKVVDHRVVESIIKSTERMTYTDVTKILRDEDEETINKYSNLVDYFKLMEELC FT KILYKKRLKRGAIDFDFEECKIILDEKGKPIEIKPYERAIANRIIEEFMLVCNETIAEH FT MFWSNLPFVYRIHEDPDEEKLMHFNEFVHNLGYVIRWNNDIHPKSLQSIIEKVKGEKEE FT TVVSTLLLRSLKQARYSPECIGHFGLAARYYCHFTSPIRRYPDLIIHRIIKEYINGQID FT DKRATKLTTEVEYASKQSSEMERVAQEAEREVDDLKKAEYMSERIGEEYEGIISSVTNF FT GMFVELPNTIEGLVHISTLSDDYYIYDERRLSLIGEASKNIYRLGDTVKIKVSKVDLFS FT HEIYFDIIKDNEEDKEEVEFIEETEKYNTNL" FT misc_feature 274348..274401 FT /note="Pfam match to entry PF00313 CSD, 'Cold-shock' FT DNA-binding domain, score 11.8, E-value 0.0081" FT /inference="protein motif:Pfam:PF00313" FT misc_feature 274618..275727 FT /note="Pfam match to entry PF00773 RNB, RNB-like FT protein,score 490.3, E-value 1.5e-144" FT /inference="protein motif:Pfam:PF00773" FT misc_feature 275974..276228 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 63.1, E-value 6.3e-16" FT /inference="protein motif:Pfam:PF00575" FT CDS 276709..277467 FT /transl_table=11 FT /gene="surE" FT /locus_tag="CBO0233" FT /product="acid phosphatase" FT /EC_number="3.1.3.2" FT /note="Similar to Escherichia coli, Escherichia coli O6,and FT Escherichia coli O157:H7 acid phosphatase SurE or b2744 or FT c3311 or z4052 or ecs3598 SWALL:SURE_ECOLI (SWALL:P36664) FT (253 aa) fasta scores: E(): 3.2e-23, 38.01 id in 242 aa, FT and to Clostridium tetani acid phosphatase sure sureSurEid FT in 252 aa" FT /db_xref="GOA:A5HYC6" FT /db_xref="InterPro:IPR002828" FT /db_xref="UniProtKB/Swiss-Prot:A5HYC6" FT /protein_id="CAL81785.1" FT /translation="MNILLTNDDGIEAEGINTLAELLSKYHDVIMVAPENQRSASSHSI FT TIYEPIIVKQVKKPYNIEAYSISGTPADCVRVALDKLVPDNIDMVISGINKGLNIGNDI FT LYSGTVSAAIEGAMYKVPSMAVSAQFIKNKKENYKIAAKYALRMLNRLKKEDLKNDVVL FT NLNIPFCSEEEIKGIKVCKVGNKIFNTRFSEEIDEEGNKVLKLEGDINKDIYEGTDVYY FT IRNKYVTLTPLHYDLTNFNILEETEQLFLS" FT misc_feature 276709..277284 FT /note="Pfam match to entry PF01975 SurE, Survival protein FT SurE, score 251.7, E-value 1.1e-72" FT /inference="protein motif:Pfam:PF01975" FT CDS 277724..278194 FT /transl_table=11 FT /gene="smpB" FT /gene_synonym="smqB" FT /locus_tag="CBO0234" FT /product="SsrA-binding protein" FT /note="Similar to Escherichia coli, Escherichia coli FT O6,Escherichia coli O157:H7, and Shigella flexneri FT SsrA-binding protein SmpB or SmqB or b2620 or c3142 or FT z3913 or ecs3482 or sf2679 or s2857 SWALL:SSRP_ECOLI FT (SWALL:P32052) (159 aa) fasta scores: E(): 9.8e-21, 45.8 id FT in 155 aa, and to Clostridium tetani SsrA-binding protein FT SmpB or ctc00385 SWALL:Q898Q7 (EMBL:AE015937) (156 aa) FT fasta scores: E(): 2.1e-46, 80.76 38d in 156 aa" FT /db_xref="GOA:A5HYC7" FT /db_xref="InterPro:IPR000037" FT /db_xref="InterPro:IPR020081" FT /db_xref="InterPro:IPR023620" FT /db_xref="UniProtKB/Swiss-Prot:A5HYC7" FT /protein_id="CAL81786.1" FT /translation="MSKKKGSNTLAENRKARHDYFIEETYEAGIELVGTEVKSIRQGKA FT NLKDSYAEIRNGEVFVRNMHISPYEQGNIYNKDPLRDRKLLLHKSEIYKLVGFTTQQGY FT TLIPLSLYLKHGRVKVSLAVAKGKKNYDKRDAMLEKAAKREMDRQIKERSRY" FT misc_feature 277745..277948 FT /note="Pfam match to entry PF01668 SmpB, SmpB protein,score FT 165.2, E-value 1.2e-46" FT /inference="protein motif:Pfam:PF01668" FT misc_feature 277805..277843 FT /note="PS01317 Protein smpB signature." FT /inference="protein motif:ProSite:PS01317" FT repeat_region 278285..278317 FT CDS complement(278333..279496) FT /transl_table=11 FT /locus_tag="CBO0235" FT /product="sodium:dicarboxylate symporter family protein" FT /note="Similar to Clostridium perfringens probable FT glutamate/ aspartate transporter cpe0967 SWALL:Q8XLS4 FT (EMBL:AP003188) (387 aa) fasta scores: E(): 3.2e-120,84.23 FT 38d in 387 aa" FT /db_xref="GOA:A5HYC8" FT /db_xref="InterPro:IPR001991" FT /db_xref="UniProtKB/TrEMBL:A5HYC8" FT /protein_id="CAL81787.1" FT /translation="MKKLFNNLIFKLVLGVIIGILIGSYASKPAIGVVITIKYILGQII FT FFAVPLIILGFITPSIAKLKQNASKFVGITVLIAYISSVAAAFLSMVAGYVLIPKLSIA FT SNPEGLKKLPELVFKLDIPPIMSVMSALALALLLGLATGWTNSDLIEKILDQFQNIILS FT IVNKVIIPILPFFIATNFAALAYEGSLSTQLPIFLKVIIIVLIGHFIWLTVLYLVGGAI FT SKENPWEVLKHYGPAYLTAVGTMSSAATLPVALKSAKKSKVLREDIVDFAIPLCSNIHL FT CGSVLTEVFFVMTVSQILYGKLPAFSTMLLFILLLGIFAIGAPGVPGGTVMASLGLIIS FT VLAFNEAGTALILTIFALQDSFGTACNVTGDGAIALMLTGIAKKKNL" FT misc_feature complement(278354..279475) FT /note="Pfam match to entry PF00375 SDF,Sodium:dicarboxylate FT symporter family, score -112.2,E-value 9.7e-06" FT /inference="protein motif:Pfam:PF00375" FT misc_feature complement(order(278423..278491,278534..278602, FT 278621..278689,278732..278791,278828..278896, FT 278939..279007,279065..279133,279218..279286, FT 279323..279382,279392..279460)) FT /note="10 probable transmembrane helices predicted for FT CBO0235 by TMHMM2.0 at aa 13-35, 39-58, 71-93, FT 122-144,164-186, 201-223, 236-255, 270-292, 299-321 and FT 336-358" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(279415..279496) FT /locus_tag="CBO0235" FT /note="probabilty 0.986, with cleavage site probability FT 0.487 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_RNA 280319..280651 FT /note="tmRNA" FT repeat_region 281092..281126 FT /rpt_family="CB.504" FT /rpt_type=DIRECT FT /rpt_unit_seq="tttaatatttttattttagtatttgtaaatagatg" FT /inference="ab initio prediction:REPuter" FT CDS 281431..282762 FT /transl_table=11 FT /locus_tag="CBO0237" FT /product="putative FAD-binding oxidoreductase" FT /note="Similar to Streptomyces sp. JP95 putative FT fad-binding oxidoreductase Grho1 grho1 SWALL:Q8KSY2 FT (EMBL:AF509565) (467 aa) fasta scores: E(): 2.5e-25,30.81 FT 38d in 464 aa, and to Bacillus cereus FAD-dependent oxidase FT bc0412 SWALL:Q81IH6 (EMBL:AE016999) (444 aa) fasta scores: FT E(): 5.9e-95, 52.16 38d in 439 aa" FT /db_xref="GOA:A5HYC9" FT /db_xref="InterPro:IPR006094" FT /db_xref="InterPro:IPR012951" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR016168" FT /db_xref="UniProtKB/TrEMBL:A5HYC9" FT /protein_id="CAL81788.1" FT /translation="MTKLTGRIVFPDDPSYDNARMDYNTRFSKYPCAIVFCQEIQDVIN FT AVKWARKNCVPIHTRCGGHSYEAFSILNNGIVIDVSEMNKVLLEKENMEVTIEAGATLL FT PIYKILWDKGVTIPGGTCPTVGIAGITLGGGFGMLTRKMGMLCDSLMAVEMVNARGKVV FT YADRCVNSDLFWASCGGGGGNFGIVTSFIFKVHPISNVAVYNITWDWSDAKEIIKTWQD FT WAPFVDERLTSILEIFTEKDGRISSSGEFLGHEDQLRCLLRPLTSVGNPIQIEIQTIPY FT IEAVIKFDGGPGPHKFKNTGAFVYHRLPDKAIDTLLCYMGISPNKDNSIQFQSLGGAVR FT DILPDETAYFHREASYIMQYITHWKVDNEKNPNIFWVEKLRQAMLKYVNGTYVNWPDIF FT IKDWPCAYYGTNYYELMRIKSKYDPENIFYFEQSIRPAKKRNYR" FT misc_feature 281521..281979 FT /note="Pfam match to entry PF01565 FAD_binding_4, FAD FT binding domain, score 148.5, E-value 1.2e-41" FT /inference="protein motif:Pfam:PF01565" FT CDS complement(282837..283226) FT /transl_table=11 FT /locus_tag="CBO0238" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR008490" FT /db_xref="UniProtKB/TrEMBL:A5HYD0" FT /protein_id="CAL81789.1" FT /translation="MKVTILNTKGRPKKYSDQQIVACMLYGVKNSIFSLRELECKIKQD FT PIFPAIVNLKEVPDYSTLSTIYAAIISFNEVILPVPGGPFIENTLPSSGSFEYVKPTTN FT LWLVSYWWRRNMVGEIHYTELNFGH" FT CDS 283372..283599 FT /transl_table=11 FT /locus_tag="CBO0239" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYD1" FT /protein_id="CAL81790.1" FT /translation="MSNYCCLNEESQEFKSLIFNAGTMNDGTGSIPDTVPLGNANSSIR FT ILGWLLPQGDTDEYPLTFCMANNPPKIQKL" FT CDS complement(283613..283762) FT /transl_table=11 FT /locus_tag="CBO0240" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYD2" FT /protein_id="CAL81791.1" FT /translation="MKADKTFNAIKYRKGRHMPALELELEYEDKPYEERQSKIHSKIYL FT NHAA" FT CDS complement(284038..284325) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0240B" FT /product="putative transcriptional regulator (partial)" FT /note="This CDS lacks N-terminal region present in database FT matches" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL81792.1" FT CDS 284737..286161 FT /transl_table=11 FT /locus_tag="CBO0241" FT /product="pyridoxal-dependent decarboxylase" FT /note="Similar to Catharanthus roseus aromatic-L-amino-acid FT decarboxylase tdC SWALL:DDC_CATRO (SWALL:P17770) (500 aa) FT fasta scores: E(): 9.8e-22, 22.05 id in 458 aa" FT /db_xref="GOA:A5HYD4" FT /db_xref="InterPro:IPR002129" FT /db_xref="InterPro:IPR010977" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5HYD4" FT /protein_id="CAL81793.1" FT /translation="MDINLKNDLENIDILLEKVTINAFDFLKDINEIATFPKSTNAYTL FT SQLNKDGLGGEKTLEEFMQRFYKGIVSCAGSKYFNFVTGGTTTAALMGDWLVSTFDQNA FT TGRDTSSAAKLEEETINLLKQLLVLPETYSGTFVTGATMANFVGLAIGRQWLANELGVN FT IAIDGLYSIPPIRIVSSTPHSSILKALSMLGMGRKNMHYIPTIDGREAIDVEALESYLK FT KLNGEPCIVVANAGTVNTVDFDDLKQIGELKEKYNFFLHVDGAFGGFASCSIKYKKLVE FT GIEAADSITIDAHKWLNVPYDSAMQFTKHPKLQIQVFQNNAVYLGELSDKPDFVHLTPE FT NSRRLRALPAWFTLKAYGQNGYQEIIERNCNLAQLLSKKIDESKNFSLLSTTRLNVVCF FT TINLENDNVNLEQIQQFLNLVNKDGRAFFTQTVYKGIAGIRAAISNWRTEEKDIEIAWE FT VLNKAYESYYETITVD" FT misc_feature 284863..285942 FT /note="Pfam match to entry PF00282 FT pyridoxal_deC,Pyridoxal-dependent decarboxylase conserved FT domain, score 60.7, E-value 6.4e-19" FT /inference="protein motif:Pfam:PF00282" FT CDS 286349..287200 FT /transl_table=11 FT /locus_tag="CBO0242" FT /product="flagellin" FT /note="Similar to Bacillus halodurans flagellin Hag or FT bh3616 SWALL:FLA_BACHD (SWALL:Q05203) (272 aa) fasta FT scores: E(): 1e-39, 49.82 38d in 279 aa, and to Clostridium FT acetobutylicum flagellin FlaC or cac2203 SWALL:O69136 FT (EMBL:AF064086) (275 aa) fasta scores: E(): 3e-41, 50.17 FT 38d in 279 aa" FT /db_xref="GOA:A5HYD5" FT /db_xref="InterPro:IPR001029" FT /db_xref="InterPro:IPR001492" FT /db_xref="UniProtKB/TrEMBL:A5HYD5" FT /protein_id="CAL81794.1" FT /translation="MIINHNVNAMIAYRNIMINGALAGKAMERLASGMRINRASDDPAG FT LAISEKMRAQIRGLEMASRNVQDGISMIQVAEGGVKEIQSMLQRMRELAVQAANGTNSP FT EDRKNIQDEINQLTRGIDDIANGTEFNTIKILNANAADAGEVKLQIGANEGQFFGIKLQ FT NMNSAALGINGNTDKDGVDVSTSEKASAAIKVFDDAINKTSSFMSSLGASSNMLEHRIN FT YLENTIGNLTEAESRIRDADMAKEMMNYTKYSVLQQVAQAIFSQVLKQQESTIQLLKSL FT NN" FT misc_feature 286427..286861 FT /note="Pfam match to entry PF00669 Flagellin_N, Bacterial FT flagellin N-terminus, score 241.0, E-value 1.8e-69" FT /inference="protein motif:Pfam:PF00669" FT misc_feature 286904..287119 FT /note="Pfam match to entry PF00700 Flagellin_C, Bacterial FT flagellin C-terminus, score 95.3, E-value 1.3e-25" FT /inference="protein motif:Pfam:PF00700" FT CDS 287559..289178 FT /transl_table=11 FT /locus_tag="CBO0243" FT /product="putative peroxidase" FT /note="Similar to Ascophyllum nodosum vanadium FT haloperoxidase SWALL:PRXV_ASCNO (SWALL:P81701) (557 aa) FT fasta scores: E(): 5.9e-25, 34.79 38d in 523 aa, and to FT Laminaria digitata vanadium-dependent bromoperoxidase 2 FT VbpO2 SWALL:CAD37192 (EMBL:AJ491787) (682 aa) fasta scores: FT E(): 6.3e-37, 36.1 38d in 518 aa" FT /db_xref="GOA:A5HYD6" FT /db_xref="InterPro:IPR000326" FT /db_xref="InterPro:IPR016119" FT /db_xref="UniProtKB/TrEMBL:A5HYD6" FT /protein_id="CAL81795.1" FT /translation="MEEKQDKNIEKYESEDKVCITKPSCPKYNTIINQCEIGPLTPEQR FT RSEAFEKRSQSASFQKDLILQGQRCNDDEILYVNKIGNNTKALPHNVLGEVNLEAYNIL FT ISALTTGNPEKFELIPLGGTRKFSDPQAAYAYEMVGPDSHHLTIAPAPSFSSAIEASEM FT AEDYWMALTRDVPFVDYDTSPETKTAAEDLSKFSAYDGPKCKGKVTTETLFRSNVPDTL FT EGPYVSQFLLKDIPFGAKTITQKYTVPVEKINYMTSYNEWLNIQNGQAPSSILKLDPVP FT RYISNGRDLGEYVHKDSSIQATLMACSILLGFGQEALSLSNPYLFSKTQEGFATFGSPH FT VLDFATRASRMSLEAAWFQKFLVHRRLRPEEFGGCVQNLKTGDAKYPINPELLDSKVLE FT IVFKKYGTYLLPMAYTEGCPTHPAYPAGHATHIGAGVTILKAFFNEDYIIPNPVVASAD FT GLDLQPYLEGDLKVGGELNKLATNIALGRDFAGVHWRSDCLEGMKLGEAVAIGLLQDYR FT NTYNEELRGFSFTKFDGTKVII" FT repeat_region 289202..289234 FT /rpt_family="CB.346" FT /rpt_type=DIRECT FT /rpt_unit_seq="agtattagagcaggtagtcatcggataaattta" FT /inference="ab initio prediction:REPuter" FT repeat_region 289393..289427 FT /rpt_family="CB.504" FT /rpt_type=DIRECT FT /rpt_unit_seq="tttaatatttttattttagtatttgtaaatagatg" FT /inference="ab initio prediction:REPuter" FT CDS 289562..290221 FT /transl_table=11 FT /locus_tag="CBO0244" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT yrkc or bsu26560 SWALL:YRKC_BACSU (SWALL:P54430) (186 aa) FT fasta scores: E(): 5.7e-41, 61.45 38d in 192 aa, and to FT Clostridium tetani conserved protein ctc01899 SWALL:Q893C8 FT (EMBL:AE015942) (193 aa) fasta scores: E(): 1.1e-40,59.09 FT 38d in 220 aa" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR013096" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:A5HYD7" FT /protein_id="CAL81796.1" FT /translation="MYNTYMMYPCSYCANIPMYNSYGMYSPYDTYSCPCFVDTPRSYND FT SDFSMQRSNRYIPFTDEFEYGSRFGSPQSANSNSPIELKDYGPQPFVVNINEATKRNNT FT FRTALWTGTHLQVTLMSINVGDDIGLEMHPNVDQFIRIEEGQGLVKMGSSKDRLNFRAK FT AYDDFAIMIPAGTWHNIINTGNRPLKVYSIYAPPQHPHGTVHVTKADAEAAEESHH" FT CDS 290562..291671 FT /transl_table=11 FT /locus_tag="CBO0245" FT /product="putative membrane protein" FT /note="Similar to Clostridium acetobutylicum predicted FT membrane protein cac0739 SWALL:Q97L27 (EMBL:AE007589) (368 FT aa) fasta scores: E(): 1.8e-33, 41.42 38d in 379 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYD8" FT /protein_id="CAL81797.1" FT /translation="MINIIKTAIITIIISFISGLLLDRYKNLAPRILCNIGKGIPIEIN FT NKKFNAYIITVRNVSSKIIHDITLHVQNGQSNLKITDAKITKGLKFDSSIEDNILDVCI FT PFLSKDDEFSVTVYVENQHGVHNKPAVIIRSPEKFKEVNSEERKGIFSIFTNIPKNIKE FT IVSDATKKDETINERNREITNKNNKLGKNKKIMIMAASVALVVIVGGVARFYFKGKPAD FT TNTKTPSVETKVLKQSKDSKGSTDKTTKGTDVKSSTDGKTKNTDGNSSTGGSSNNTDKK FT PSTGGTNGNTNKKPSTGDTNKSPSTSDTTGNKDGDSSKDGTTNGKTDGDSSNSGTTNDG FT DKNPSTGGGTTGNTDEKPSTDGTKGDTGN" FT misc_feature order(290571..290627,291141..291209) FT /note="2 probable transmembrane helices predicted for FT CBO0245 by TMHMM2.0 at aa 4-22 and 194-216" FT /inference="protein motif:TMHMM:2.0" FT CDS 292173..293345 FT /transl_table=11 FT /locus_tag="CBO0246" FT /product="NAD-dependent malic enzyme" FT /EC_number="1.1.1.40" FT /note="Similar to Corynebacterium melassecola malic enzyme FT MalE SWALL:Q9KIF8 (EMBL:AF234535) (392 aa) fasta scores: FT E(): 3.3e-63, 52.91 38d in 378 aa, and to Escherichia coli FT NADP-dependent malic enzyme MaeB or b2463 SWALL:MAO2_ECOLI FT (SWALL:P76558) (759 aa) fasta scores: E(): 2.7e-57, 48.88 FT id in 403 aa" FT /note="Also similar to CBO0210 (66.6 38d)" FT /db_xref="GOA:A5HYD9" FT /db_xref="InterPro:IPR001891" FT /db_xref="InterPro:IPR012301" FT /db_xref="InterPro:IPR012302" FT /db_xref="InterPro:IPR015884" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5HYD9" FT /protein_id="CAL81798.1" FT /translation="MNYFEESLKLHEDNRGKIEIKSKMEVKTRDDLSLAYTPGVAEPCR FT KIHENEENVYKYTSKGNMVAVVTDGTAVLGLGDIGPKAGLPVMEGKALLFKEFANVDAF FT PICLDTKDVDEIVKTVKLIAPGFGGINLEDIGAPRCFEIEEKLKKELDIPVFHDDQHGT FT AIVVLAGVINALKVVNKKIEDVKVVVNGAGAAGTAITKLLLSLGVKNLIVCDKVGILYE FT GIENVDDAKKELSKVTNPENIKGTLADALIGADVFIGVSAPGIVSKDMVETMNKDSIIF FT AMANPTPEIMPDLAKEAGAKVIGTGRSDFPNQVNNVLAFPGIFKGALDVRAKEINEEMK FT IAAAYAIASMIKDKDLNEDNVIPYALDRSVADNVAKAIKEAARKSGVARV" FT misc_feature 292218..292646 FT /note="Pfam match to entry PF00390 malic, Malic FT enzyme,N-terminal domain, score 296.5, E-value 3.3e-86" FT /inference="protein motif:Pfam:PF00390" FT misc_feature 292638..292688 FT /note="PS00331 Malic enzymes signature." FT /inference="protein motif:ProSite:PS00331" FT misc_feature 292650..293321 FT /note="Pfam match to entry PF03949 malic_N, Malic FT enzyme,NAD binding domain, score 382.0, E-value 6.4e-112" FT /inference="protein motif:Pfam:PF03949" FT repeat_region complement(293342..293392) FT /note="intergenic repeat 1" FT repeat_region complement(293444..293527) FT /note="intergenic repeat 1" FT CDS 293557..294531 FT /transl_table=11 FT /gene="kdgT" FT /locus_tag="CBO0247" FT /product="2-keto-3-deoxygluconate permease" FT /note="Similar to Erwinia chrysanthemi FT 2-keto-3-deoxygluconate permease KdgT SWALL:KDGT_ERWCH FT (SWALL:P15701) (339 aa) fasta scores: E(): 2.4e-33, 38.43 FT id in 307 aa, and to Erwinia carotovora FT 2-keto-3-deoxygluconate permease KdgT SWALL:KDGT_ERWCA FT (SWALL:Q9XB52) (318 aa) fasta scores: E(): 3.1e-36, 41.29 FT id in 310 aa" FT /db_xref="GOA:A5HYE0" FT /db_xref="InterPro:IPR004684" FT /db_xref="UniProtKB/TrEMBL:A5HYE0" FT /protein_id="CAL81799.1" FT /translation="MQIPIKKTLDKIPGGMMVVPLFLGVLVNTFFPQFLQIGGFTTALF FT SAKASSTILACFMFLIGSQINFKLAPKAIKKGAILIAGKFIVGAGIGIFVGKVFGPAGV FT LGLSPLAILSALTNCNGGLYASLASQYGDETDVGAYALLSLKDGPFFTLVALGASGLAQ FT VPIMALVAVMIPIVIGMILGNLDPDMRKFLGSSKMLLIPFFSFPLGAGMNLETIVKAGG FT PGILLGIIAAFTGIGAYVLLKLFKEEPIIGLATGSTAGNAVATPAAVAAADPTLAVVAT FT VATAQVAAACVISAILCPFIVSYVFGRLNKNKMKKLNNEATAG" FT sig_peptide 293557..293701 FT /gene="kdgT" FT /locus_tag="CBO0247" FT /note="probabilty 0.998, with cleavage site probability FT 0.313 between residues 49 and 50" FT /inference="protein motif:SignalP:2.0" FT misc_feature 293557..294486 FT /note="Pfam match to entry PF03812 FT KdgT,2-keto-3-deoxygluconate permease, score 211.8, E-value FT 1.1e-60" FT /inference="protein motif:Pfam:PF03812" FT misc_feature order(293590..293658,293701..293769,293788..293856, FT 294043..294111,294130..294186,294214..294282, FT 294301..294369,294406..294474) FT /note="8 probable transmembrane helices predicted for FT CBO0247 by TMHMM2.0 at aa 12-34, 49-71, 78-100, FT 163-185,192-210, 220-242, 249-271 and 284-306" FT /inference="protein motif:TMHMM:2.0" FT CDS 294745..296367 FT /transl_table=11 FT /locus_tag="CBO0248" FT /product="two-component sensor kinase" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 sensor protein DcuS or b4125 or z5727 or ecs5107 FT SWALL:DCUS_ECOLI (SWALL:P39272) (543 aa) fasta scores: E(): FT 1.4e-44, 31.09 38d in 537 aa, and to Clostridium tetani FT sensor kinase DpiB or ctc01524 SWALL:Q894L7 (EMBL:AE015941) FT (538 aa) fasta scores: E(): 4.2e-67,41.17 38d in 544 aa" FT /db_xref="GOA:A5HYE1" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR016121" FT /db_xref="UniProtKB/TrEMBL:A5HYE1" FT /protein_id="CAL81800.1" FT /translation="MRKAMKLQTKITLLIITVVFLSIAIIISFVVSWMTGNIENKAKTN FT IMNVAEMVAHSTQIVDALEEKDPNGKIGPYINMQLKNLQQIQYIIVADNDGIRYSHPNP FT KMIKKKFEGGDEYKVVKEGETYISEATGTLGKSMRAFAPIYDRENKKEIGFVSVGTLNE FT NIETAKHIAILYIILIGFGGLMAGTIGAILLSNNIKNILLGLEPEEITNLYNEKMGILD FT TIHEGLVAVDYMGRITLINNSALKILNLQHKVDKDEVIGKNIENIIENTGMINILQTGE FT SEFEREQKINNTTIMTNRIPIMKREKIVGAIASFRDKTEVTRMAEELTGAKKMAWSLRA FT QNHEFMNKLHTISGLIQLEEYDEALQFISDMAKSRNSISNILSHNIKNPSISALLLSKY FT NKAEECRVSLKIDENCKLTKLPQHMTSEEIVSIIGNLIENSLDEVKNDGTGLIYIKIVE FT NKNYLNIIVKDNGSGIPVEYREKIYHQGFSTKEAQRGYGMYIVKKIIDETKGTIRLDVD FT NGVIWNITIPMTRGDKIDSGNDS" FT sig_peptide 294745..294862 FT /locus_tag="CBO0248" FT /note="probabilty 0.999, with cleavage site probability FT 0.339 between residues 40 and 41" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(294775..294843,295255..295323) FT /note="2 probable transmembrane helices predicted for FT CBO0248 by TMHMM2.0 at aa 11-33 and 171-193" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 295132..295155 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 296014..296331 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 77.2,E-value 3.5e-20" FT /inference="protein motif:Pfam:PF02518" FT CDS 296345..297019 FT /transl_table=11 FT /locus_tag="CBO0249" FT /product="two-component response regulator" FT /note="Similar to Bacillus subtilis probable FT c4-dicarboxylate response regulator dctr dctr or bsu04460 FT SWALL:DCTR_BACSU (SWALL:P96602) (226 aa) fasta scores: E(): FT 1e-26, 40 38d in 220 aa" FT /db_xref="GOA:A5HYE2" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013196" FT /db_xref="InterPro:IPR024187" FT /db_xref="UniProtKB/TrEMBL:A5HYE2" FT /protein_id="CAL81801.1" FT /translation="MIQVMIVEDDPMVREINSKFLKRVEGFVLYKAVSNLYDAKKFIAM FT KKPDLILLDVYLPKENGIDLLKWIRKQDIDIDIILITADKSIERIQEAFRSGVVDYLIK FT PFNFERFKESLIQFKGRYYEFKKNNVIEQKDLDKIICSSNISQNEDDFAKGLNKYTYKS FT IWNEIEKSNDKDFTAEYLAEKLGIARVTVRRYLEYMEKENKVYKLVEYGKVGRPQHKYH FT KI" FT misc_feature 296348..296713 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 104.5, E-value 2.1e-28" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 296870..296935 FT /note="Predicted helix-turn-helix motif with score FT 1797.000, SD 5.31 at aa 176-197, sequence FT FTAEYLAEKLGIARVTVRRYLE" FT misc_binding 297270..297445 FT /locus_tag="CBO0250" FT /bound_moiety="lysine" FT /note="Lysine riboswitch" FT CDS 297576..299039 FT /transl_table=11 FT /locus_tag="CBO0250" FT /product="amino-acid permease" FT /note="Similar to Bacillus subtilis amino-acid permease FT RocE or bsu40330 SWALL:ROCE_BACSU (SWALL:P39137) (467 aa) FT fasta scores: E(): 1.8e-73, 41.99 38d in 462 aa, and to FT Clostridium perfringens lysine specific permease cpe1166 FT SWALL:Q8XL76 (EMBL:AP003189) (489 aa) fasta scores: E(): FT 9.5e-137, 69.37 38d in 480 aa" FT /db_xref="GOA:A5HYE3" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:A5HYE3" FT /protein_id="CAL81802.1" FT /translation="MSTTKEKDSNSHNLKRSLQARHLNMIAMGGAIGTGIFLALGATIK FT QAGPGGALTAYACIGVMVYFLMTSLGEMATFMPVSGSFETYASRFIDPAFGFALGWNYW FT YNWAITVAAEMVAGALIMKFWFPNVPAIIWSVLFLVLIVSLNLLSTKAYGESEYWFAGI FT KVFTVIVFLLIGIATILGILGGHTVGLQNFTIKDAPFVGGVKSIFMVFLIAGFSFQGTE FT LVGIAAGESENPKKTIPKAINTIFWRIIVFYLGTIFVVSAIIPYTDAGVNTSPFTLVFE FT RAGIAADASLMNAVILTSVISCGNSGMYASSRMLYAMAKEGKAPSWLGKLNSRGVPVNA FT LALTTLVASACFLTGLYAETTVYVWLVAASGLAGFIAWVGIALCHYRFRKAYVAQGRDL FT NKLVYKAKLFPLGPIIALVLCIIVILGQGISYFEATKIDWNGIIASYIGLPIFFGLWFS FT YKKKHKTKVVNLQEISFDVEDTHLKTEIV" FT sig_peptide 297576..297711 FT /locus_tag="CBO0250" FT /note="probabilty 0.962, with cleavage site probability FT 0.544 between residues 46 and 47" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(297633..297701,297729..297797,297855..297923, FT 297966..298019,298056..298124,298167..298235, FT 298308..298376,298455..298523,298581..298649, FT 298659..298727,298797..298865,298893..298952) FT /note="12 probable transmembrane helices predicted for FT CBO0250 by TMHMM2.0 at aa 20-42, 52-74, 94-116, FT 131-148,161-183, 198-220, 245-267, 294-316, 336-358, FT 362-384,408-430 and 440-459" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 297639..298991 FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 559.6, E-value 2.2e-165" FT /inference="protein motif:Pfam:PF00324" FT misc_feature 298107..298139 FT /note="PS00435 Peroxidases proximal heme-ligand signature." FT /inference="protein motif:ProSite:PS00435" FT CDS 299583..300317 FT /transl_table=11 FT /locus_tag="CBO0251" FT /product="putative metallo-beta-lactamase superfamily FT protein" FT /note="Similar to Serratia fonticola beta-lactamase SfhI FT SWALL:Q9RMI1 (EMBL:AF197943) (234 aa) fasta scores: E(): FT 0.086, 25.4 38d in 248 aa, and to Aeromonas veronii FT metallo-B-lactamase ImiS SWALL:O31272 (EMBL:Y10415) (255 FT aa) fasta scores: E(): 0.45, 22.26 38d in 247 aa" FT /db_xref="GOA:A5HYE4" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:A5HYE4" FT /protein_id="CAL81803.1" FT /translation="MTLTKVTDRIYFLENDKEADRALIGYIKGDKYSLMVDAGNSKNHV FT EKFNNSIEKLNLRLPDYVAITHWHWDHTYGMNAVTGKTIACEITNERLKIMSKWQWTDE FT AMKQRLLTGEDIEFADTNIRKEYKNLEDIKVTHADVVFKNDLEINLGGLKVILKNVVAP FT HSEDSVIVYVPEERVVFIGDAYSIDFYNNYKYDLAKLQSFINMLESLEFDICFLGHSSP FT LKKADIIEYLKSQYKKISISNN" FT misc_feature 299643..300239 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 55.8, FT E-value 9.9e-14" FT /inference="protein motif:Pfam:PF00753" FT CDS 300431..300943 FT /transl_table=11 FT /locus_tag="CBO0252" FT /product="putative acetyltransferase" FT /note="Similar to Clostridium acetobutylicum predicted FT acetyltransferase cac2751 SWALL:Q97FI6 (EMBL:AE007773) (167 FT aa) fasta scores: E(): 8.9e-07, 25.44 38d in 169 aa" FT /db_xref="GOA:A5HYE5" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HYE5" FT /protein_id="CAL81804.1" FT /translation="MDKGVDMEQYIFELAQYGDIKDILSLIKLRIKWMDEKGIEQWNKT FT DYLNCYPSEYFQNCIFKKELYVLKVKENKTIVGAVALHTYDSRWKDKDSSYYVHNLVTS FT VNACCAGIVLINNCELVAKNNNKRYLRLDCQASNIKLNRYYERLGFGYVGIIKDGLYVG FT NKREKII" FT misc_feature 300632..300883 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 19.4, FT E-value 0.004" FT /inference="protein motif:Pfam:PF00583" FT CDS 300969..301346 FT /transl_table=11 FT /locus_tag="CBO0253" FT /product="cytidine deaminase" FT /EC_number="3.5.4.5" FT /note="Similar to Bacillus caldolyticus cytidine deaminase FT Cdd SWALL:Q9R2S1 (EMBL:AJ237979) (132 aa) fasta scores: FT E(): 1.2e-05, 30.4 38d in 125 aa, and to Aspergillus FT terreus blasticidin-S deaminase Bsd SWALL:BSD_ASPTE FT (SWALL:P78986) (130 aa) fasta scores: E(): 3.9e-05, 31.49 FT id in 127 aa" FT /db_xref="GOA:A5HYE6" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="UniProtKB/TrEMBL:A5HYE6" FT /protein_id="CAL81805.1" FT /translation="MKFDELYDIAKNALNPRKISKNSYAGSVAAAILSESGKVYTGVCI FT DTPCSMGFCAEHAAIAAMITAGENRITKVVAVYEDGTIIPPCGRCREFICQIHDENYKC FT QVMIKKDMIITINDLLPYRWE" FT misc_feature 300978..301295 FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT -0.4, E-value 0.0034" FT /inference="protein motif:Pfam:PF00383" FT misc_feature 301128..301250 FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT /inference="protein motif:ProSite:PS00903" FT CDS 301505..302407 FT /transl_table=11 FT /locus_tag="CBO0254" FT /product="putative acetyltransferase" FT /note="Similar to Listeria innocua hypothetical protein FT Lin2361 SWALL:Q929B6 (EMBL:AL596172) (291 aa) fasta scores: FT E(): 3.5e-39, 37.75 38d in 294 aa, and to Bacillus FT halodurans hypothetical protein Bh3929 bh3929 SWALL:Q9K606 FT (EMBL:AP001520) (286 aa) fasta scores: E(): 1.7e-23,30.47 FT 38d in 292 aa" FT /db_xref="GOA:A5HYE7" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HYE7" FT /protein_id="CAL81806.1" FT /translation="MSEFLLINDKKYSYACNYRDDSILRNSFNTLTEKTYGFNFKQWYE FT DGYWGDKYIPYSLLDGDNVVSNVSVNIIDFLILGEEKRYVQIGTVMTDEEYRGQGLCRA FT LMERVIKEWEDKCDLIYLFANDSVLDFYPKFGFDKCDEYQYAINKIKKKKPGKIRKMSM FT DNERDREFVYNMACNTISLSKLSMKNNASLIMFYCTSFMKDNIYYLEDYDTVAICDFDE FT DILYVQDVFAKKEVNLDNIINVMMKYETKKVILGFTPNNSSSNEKILINEDDTTLFIKM FT GKDSPFKTRDLMFPVLSHA" FT misc_feature 301670..301918 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 37.8, FT E-value 2.7e-08" FT /inference="protein motif:Pfam:PF00583" FT CDS 302433..302957 FT /transl_table=11 FT /locus_tag="CBO0255" FT /product="putative reductase" FT /note="Similar to Thermotoga maritima dihydrofolate FT reductase FolA or DyrA or tm1641 SWALL:DYR_THEMA FT (SWALL:Q60034) (169 aa) fasta scores: E(): 0.00064, 24.56 FT id in 171 aa, and to Bacillus cereus pyrimidine reductase FT bc0650 SWALL:Q813Y8 (EMBL:AE017000) (173 aa) fasta scores: FT E(): 1.8e-16, 37.19 38d in 164 aa" FT /db_xref="GOA:A5HYE8" FT /db_xref="InterPro:IPR002734" FT /db_xref="InterPro:IPR024072" FT /db_xref="UniProtKB/TrEMBL:A5HYE8" FT /protein_id="CAL81807.1" FT /translation="MKRKIILNLAMSIDGYIASKDGGFDWIVGDGDEKLDTKDKWDYDK FT FLNDVDTVVMGKNCYDQSFHNDFADKKVYVATSQKLQNYGNIHFINGDICKVIEEEKEK FT KGKDIFLFGGGGLADNFIKSNIIDEYIIGIIPTILGKGRPLFLENNPKIDLHLDQYIMD FT KGVVILRYSKR" FT misc_feature 302439..302939 FT /note="Pfam match to entry PF01872 RibD_C, RibD C-terminal FT domain, score 46.6, E-value 5.8e-11" FT /inference="protein motif:Pfam:PF01872" FT CDS 303020..303949 FT /transl_table=11 FT /locus_tag="CBO0256" FT /product="putative exonuclease" FT /note="Similar to Clostridium acetobutylicum DNA polymerase FT III epsilon subunit cac0738 SWALL:Q97L28 (EMBL:AE007589) FT (306 aa) fasta scores: E(): 7.7e-76,68.75 38d in 304 aa" FT /db_xref="GOA:A5HYE9" FT /db_xref="InterPro:IPR001357" FT /db_xref="InterPro:IPR006055" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/TrEMBL:A5HYE9" FT /protein_id="CAL81808.1" FT /translation="MNFVAIDFETANEKRNSPCSIGIVVVKDGEIVEKVHYLIKPKEMR FT FMPINIGIHGIRPHMVQDELEFDKIWGKIKGYFNNNLVIAHNASFDMSVLRSTLKLYNI FT KMPSFEYICTMKLSKNFYSNIDNARLNTVNNFLGYKFKHHDALADAMACSNILINISKE FT LNSKDINEISKLIGVTLGYVNEDGCKPSSIKGRILKRSNRQAPRENKKIIESFNFTAFK FT EEVVVFTGGLASMTRNEAMILVGKLNGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKL FT KKAIDLKKKGQNIKFLNEEAFLQKCKEK" FT misc_feature 303026..303514 FT /note="Pfam match to entry PF00929 Exonuclease,Exonuclease, FT score 67.3, E-value 3.5e-17" FT /inference="protein motif:Pfam:PF00929" FT misc_feature 303671..303931 FT /note="Pfam match to entry PF00533 BRCT, BRCA1 C Terminus FT (BRCT) domain, score 20.4, E-value 1.1e-05" FT /inference="protein motif:Pfam:PF00533" FT CDS complement(304450..305124) FT /transl_table=11 FT /locus_tag="CBO0257" FT /product="putative isochorismatase" FT /note="Similar to Thermus thermophilus orf protein FT SWALL:Q9RA48 (EMBL:AB029373) (196 aa) fasta scores: E(): FT 0.00015, 34.54 38d in 165 aa, and to Clostridium FT acetobutylicum amidase related to nicotinamidase cac0779 FT SWALL:Q97KY7 (EMBL:AE007593) (211 aa) fasta scores: E(): FT 1.6e-42, 59.36 38d in 219 aa" FT /db_xref="GOA:A5HYF0" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:A5HYF0" FT /protein_id="CAL81809.1" FT /translation="MIYFCPIYGNWVEYSSDDNLDYSGYWPPRNIRAEVTNQTIIDKWN FT TVSPPPAPELKSVAVDPKTSALLILDMEASICKSSRCIASIPNIHNLLTKARKNNMLVV FT YSLTHVGNPRDIFKQLALLPGDPIVKSNVDKFYKTNLEKILQEKGIKTVVVTGYAANGA FT VLHTGTSAAFRGYNVIIPVDCMSANNLYGEQYTAWHMLNSPGTRNRAVLTKADLISFYH FT DN" FT misc_feature complement(304471..304947) FT /note="Pfam match to entry PF00857 FT Isochorismatase,Isochorismatase family, score 33.1, E-value FT 3e-10" FT /inference="protein motif:Pfam:PF00857" FT repeat_region complement(305206..305354) FT /note="intergenic repeat 2" FT CDS 305551..307881 FT /transl_table=11 FT /gene="xdhA1" FT /locus_tag="CBO0258" FT /product="xanthine dehydrogenase, molybdenum binding FT subunit" FT /EC_number="1.17.1.4" FT /note="Similar to Escherichia coli xanthine FT dehydrogenase,molybdenum binding subunit XdhA or b2866 FT SWALL:XDHA_ECOLI (SWALL:Q46799) (752 aa) fasta scores: E(): FT 6e-37, 29.35 id in 780 aa, and to Bacillus halodurans FT hypothetical protein Bh1977 SWALL:Q9KBF1 (EMBL:AP001513) FT (1054 aa) fasta scores: E(): 1.7e-176, 59.58 38d in 767 aa" FT /db_xref="GOA:A5HYF1" FT /db_xref="InterPro:IPR000674" FT /db_xref="InterPro:IPR008274" FT /db_xref="UniProtKB/TrEMBL:A5HYF1" FT /protein_id="CAL81810.1" FT /translation="MYDLNIIGKNVPRKESIDKVTGAAKYTNDYEATGLLYARMVTSPY FT AHAKIKAIEYENSLKTSGVRAVITGEYFPQLVGSTIVDRPPIAIDKVRYNGEPVAVVVA FT DSEIEAKKAAQMIKIEYEPLPVVNSPSEAIKKDSPLVHEKLGDYEIIDEVFPEPNTNIA FT NRTKIRKGDIKKGWHESEVTVEASFSFPPSDHAAMETRSVTARILPDGRVIIYSCSQAP FT FAIKKLISHFFNIDPGKVIVHVPLVGGAYGGKTAVQLEFIAYLCSKAVGGRQVKLTNTR FT EEDFITSPVHIGLDAKIKLGSTKAGRLTATEITYLFDGGSYSDKAVIISRAAGIDCTGP FT YNIENVWCDSLCMYTNHPYAAAFRGFGHPELTFVIERSMDILADKLGMDPLELRLRNAI FT LPGDTSATQILLNKSNLGNLPQCIQKLIELINWGEVDEAETEDGKVRAKGVSCFWKNSN FT TSLNAGGGAVLTFNLDGSINLICAAVEIGQGIKTALAQILAEKMKMDVDQIHVTMEVNT FT KTNPEHWKTAASRTTLLVGRAVLRAAEDAINQLCDIAAVVLGRSPVELEVGRGRVFLKD FT NPQIGIEISKIAFGYILPNGNSIGAQVIGRGSYAFNNLTTLDPKTGKGNPGPEWTVGAA FT AVEIELDKKEYTYKIIKAACVIDAGKVINAGGARGQISGGMNLGLSFASREAFLFTNKG FT IVQNKQLRTYNIMRLGENPEYLVDFVETPNLDGPYGARGIGEYGVIGMPAALGNSLSCA FT AEVPLNQLPLIPEFIWKVKEGGH" FT misc_feature 305611..305928 FT /note="Pfam match to entry PF01315 Ald_Xan_dh_C, Aldehyde FT oxidase and xanthine dehydrogenase, a/b hammerhead FT domain,score 128.1, E-value 1.7e-35" FT /inference="protein motif:Pfam:PF01315" FT misc_feature 305932..307689 FT /note="Pfam match to entry PF02738 Ald_Xan_dh_C2, Aldehyde FT oxidase and xanthine dehydrogenase, molybdopterin binding FT domain, score 281.7, E-value 9.7e-82" FT /inference="protein motif:Pfam:PF02738" FT misc_feature 306292..306315 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 307881..308720 FT /transl_table=11 FT /gene="xdhB2" FT /locus_tag="CBO0259" FT /product="xanthine dehydrogenase, FAD binding subunit" FT /EC_number="1.17.1.4" FT /note="Similar to Escherichia coli xanthine FT dehydrogenase,FAD binding subunit XdhB or b2867 FT SWALL:XDHB_ECOLI (SWALL:Q46800) (292 aa) fasta scores: E(): FT 0.00013, 22.06 id in 281 aa, and to Bacillus cereus FT xanthine dehydrogenase fad-binding subunit bc3167 FT SWALL:Q81BJ0 (EMBL:AE017008) (279 aa) fasta scores: E(): FT 6.2e-54,52.89 38d in 276 aa" FT /db_xref="GOA:A5HYF2" FT /db_xref="InterPro:IPR002346" FT /db_xref="InterPro:IPR005107" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR016169" FT /db_xref="UniProtKB/TrEMBL:A5HYF2" FT /protein_id="CAL81811.1" FT /translation="MIAFNFEYYKPDSLDEAVKMYKELSKSGKEPLYYSGGTEIITMAR FT RNDLVTKAVIDTKGIPECNVFEIKGNQLIIGAAVTLNHIAENKLIPFLSETADFPADHT FT SRNKITVGGNICGKIIYKEAVLGHLIGDSSVSIYGKKGKRILPIIQAFNQKLQLKKGEF FT LFQLSTEISYSNLPYISVKKTKQGKMEYPLISMAALKKNNNIQMAFSGVCSFPFRSMEM FT EKYINNKTLTKEQRIEQAISHLPAPILGNIQGSSEYKRFVLRNLLEYTLEILDGERR" FT CDS 308717..309190 FT /transl_table=11 FT /gene="xdhC1" FT /locus_tag="CBO0260" FT /product="xanthine dehydrogenase iron-sulfur binding FT subunit" FT /note="Similar to Escherichia coli xanthine dehydrogenase FT iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI FT (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 FT id in 154 aa, and to Clostridium tetani carbon monoxide FT dehydrogenase, small subunit ctc02474 SWALL:Q891A6 FT (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 FT id in 152 aa" FT /db_xref="GOA:A5HYF3" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR002888" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR012675" FT /db_xref="UniProtKB/TrEMBL:A5HYF3" FT /protein_id="CAL81812.1" FT /translation="MISYIEETKIELDINGEKRSVIVRPADTLLRVLREKLGLTGGKPG FT CENGDCGACTVLLDGIPIKSCIILAVEAVGHKLITIEGLKEEPIQKAFIEKMGFQCGYC FT TPGFIMNCYGLIKNNPYADDETIEKWLQSNICRCTGYEEIRDAVKSVLFSNKK" FT misc_feature 308777..308932 FT /note="Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur FT cluster binding domain, score 9.6, E-value 0.033" FT /inference="protein motif:Pfam:PF00111" FT misc_feature 308852..308878 FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00197" FT misc_feature 308954..309166 FT /note="Pfam match to entry PF01799 fer2_2, [2Fe-2S] binding FT domain, score 120.1, E-value 4.3e-33" FT /inference="protein motif:Pfam:PF01799" FT CDS 309547..310017 FT /transl_table=11 FT /locus_tag="CBO0261" FT /product="putative exported protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1837 SWALL:Q8XJC3 (EMBL:AP003192) (146 aa) fasta FT scores: E(): 1.4, 29.66 38d in 118 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYF4" FT /protein_id="CAL81813.1" FT /translation="MRVKILIILGASILILTAVGFYIFNNESKALSDNKAENIKKFDEV FT YSSEINKSYDGTYLDKIVTMVDAKEEFNIKINDINKGSKIILINSSNGEKQDMTYTENN FT EFVLTTKLDEGVNYGILMDNKLIGGIRVVDELDKADKEKIYEEVMESLQCGI" FT sig_peptide 309547..309640 FT /locus_tag="CBO0261" FT /note="probabilty 0.996, with cleavage site probability FT 0.524 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT CDS 310028..310711 FT /transl_table=11 FT /gene="ccdA1" FT /locus_tag="CBO0262" FT /product="cytochrome C biogenesis protein" FT /note="Similar to Paracoccus pantotrophus cytochrome C FT biogenesis protein CcdA SWALL:Q9EYZ1 (EMBL:AF308446) (247 FT aa) fasta scores: E(): 3.3e-25, 37.44 38d in 211 aa, and to FT Bacillus subtilis cytochrome C-type biogenesis protein CcdA FT or bsu17930 SWALL:CCDA_BACSU (SWALL:P45706) (235 aa) fasta FT scores: E(): 1.8e-21, 32.03 38d in 231 aa" FT /db_xref="GOA:A5HYF5" FT /db_xref="InterPro:IPR003834" FT /db_xref="UniProtKB/TrEMBL:A5HYF5" FT /protein_id="CAL81814.1" FT /translation="MNYILLFLEGIITFISPCILPMIPIYVSYFAGEDIDNKNYKNRAL FT ISSIAFVAGFTFVFTLLGVAAGTVGVIFNKYMREINIVSGSIMVVFGLNYLGIINVGLL FT HRSFKINKSAGHKKSSIMSTALFGMIFGFGWTPCVGPFLGSALMIASNSTNVFMGASML FT MIYSLGLGIPFILSALLIDSLKTTFDFIKRNYKTINRISGGLLIAIGIMMMTGYLNLLL FT SILTF" FT misc_feature 310043..310672 FT /note="Pfam match to entry PF02683 DsbD, Cytochrome C FT biogenesis protein transmembrane region, score FT 200.0,E-value 3.7e-57" FT /inference="protein motif:Pfam:PF02683" FT misc_feature order(310055..310123,310160..310228,310271..310339, FT 310400..310468,310511..310570,310631..310699) FT /note="6 probable transmembrane helices predicted for FT CBO0262 by TMHMM2.0 at aa 10-32, 45-67, 82-104, FT 125-147,162-181 and 202-224" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 310418..310447 FT /note="PS00086 Cytochrome P450 cysteine heme-iron ligand FT signature." FT /inference="protein motif:ProSite:PS00086" FT CDS 310733..311299 FT /transl_table=11 FT /gene="resA" FT /locus_tag="CBO0263" FT /product="thiol-disulfide oxidoreductase" FT /note="Similar to Bacillus subtilis thiol-disulfide FT oxidoreductase ResA or bsu23150 SWALL:RESA_BACSU FT (SWALL:P35160) (179 aa) fasta scores: E(): 2.6e-11, 29.03 FT id in 186 aa" FT /db_xref="GOA:A5HYF6" FT /db_xref="InterPro:IPR000866" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:A5HYF6" FT /protein_id="CAL81815.1" FT /translation="MKNNKRYIYISVIMLALLVGVKFGYDYLSNNYKSNEAINNVSDEN FT SSFQPAVDFTVYDKDNNEVKLSDYKGKKAIVVNFWASWCSPCKYEMPYFQEATNKYNNE FT DLEILMVNLTDGMRETKGSAEGFMKEEGYDMNVMFDINLDAANKYQLNAIPRTVFIDKE FT GNLVYDHVGIINKEILDENINKIIN" FT misc_feature 310751..310819 FT /note="1 probable transmembrane helix predicted for CBO0263 FT by TMHMM2.0 at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 310889..311068 FT /note="Pfam match to entry PF00085 thiored, FT Thioredoxin,score 17.6, E-value 0.00025" FT /inference="protein motif:Pfam:PF00085" FT CDS 311324..312001 FT /transl_table=11 FT /locus_tag="CBO0264" FT /product="two-component response regulator" FT /note="Similar to Enterococcus faecium regulatory protein FT VanR SWALL:VANR_ENTFC (SWALL:Q06239) (231 aa) fasta scores: FT E(): 7.1e-27, 41.66 38d in 228 aa, and to FT Thermoanaerobacter tengcongensis response regulators FT consisting of a chey-like receiver domain and a hth FT DNA-binding domain ompr6 or tte2474 SWALL:Q8R7E1 FT (EMBL:AE013188) (231 aa) fasta scores: E(): 3.6e-39,51.32 FT 38d in 226 aa" FT /db_xref="GOA:A5HYF7" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYF7" FT /protein_id="CAL81816.1" FT /translation="MKETILVIDDEVKIIEVIKLYLENEGYTVIQATSGIEALEKQSEF FT NPDLLILDLMLPDISGENVCERIRRESEVPIIMLTAKSSEDSILNGYSIGSDDYITKPF FT SPKQLVAKVNAVLKRVKGNQRENLIFNNELIIDIVNKKVEYNNKEIILTASEYKILSIL FT AKNPNKIFSREELMDYISRDNTCIYDRIIDTHIKNIRAKLDQDSKNPTYIKTIRGMGYR FT FNV" FT misc_feature 311330..311686 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 131.9, E-value 1.2e-36" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 311762..311992 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 77.3, E-value 3.4e-20" FT /inference="protein motif:Pfam:PF00486" FT CDS 311994..313391 FT /transl_table=11 FT /locus_tag="CBO0265" FT /product="two-component sensor kinase" FT /note="Similar to Clostridium perfringens two-component FT sensor histidine kinase cpe2331 SWALL:Q8XHZ3 FT (EMBL:AP003193) (467 aa) fasta scores: E(): 1.2e-57,38.36 FT 38d in 464 aa" FT /db_xref="GOA:A5HYF8" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HYF8" FT /protein_id="CAL81817.1" FT /translation="MFNKLRYRVSLIFILFSLSIIFLANIVNHYCIEKKFNIYTSEKIQ FT QSKMEIKNKISNAYSNNSWDKKAIENIGTDAITGGLLITVKDKNDNIIWNAREYDNIVC FT EKILNKIIENTNKVSPDVDIKNTFDKFNLKQGEALIGKLEIEYIGPIYYEDSDVIFLRM FT LDRILFILGLLFFIISIIVGWLLSYAISKPILKVIDATNLISEGNYSKGIKEDYSIYEI FT NKLIKSINMMAGDLDKQEKIRQELTKDISHELRTPITTMQAQLEAIMDGLWEPSQERLK FT SIYDELQRLNRLTVSIEDLSRCEGSKLRLNKSEVDLETVITTILTNFEKQLLDKDINLQ FT VDLKHINIMIDRDKISQVILNIISNAIKYTPDKGEIFVRCFIKSDNVYISIKDSGIGIS FT DEDKDYIFERFYRTDKSRARETGGVGIGLTISREIVKAHGGSINVYSKLDEGSNFVIKL FT PIKFCGT" FT misc_feature order(312015..312083,312495..312563) FT /note="2 probable transmembrane helices predicted for FT CBO0265 by TMHMM2.0 at aa 15-37 and 175-197" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 312495..312707 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 42.2, E-value 1.2e-09" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 312717..312911 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 51.9, E-value 1.5e-12" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 313041..313376 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 147.1, FT E-value 3.3e-41" FT /inference="protein motif:Pfam:PF02518" FT CDS complement(313753..314847) FT /transl_table=11 FT /locus_tag="CBO0266" FT /product="putative FAD-dependent oxidoreductase" FT /note="Similar to Clostridium perfringens probable FT reticuline oxidase cpe0406 SWALL:Q8XND2 (EMBL:AP003186) FT (448 aa) fasta scores: E(): 4.9e-57, 42.33 38d in 352 aa" FT /db_xref="GOA:A5HYF9" FT /db_xref="InterPro:IPR006094" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR016168" FT /db_xref="UniProtKB/TrEMBL:A5HYF9" FT /protein_id="CAL81818.1" FT /translation="MIKLIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDVKKA FT ILFARKNNFKIRVRCGGHNYEGFSIADDALIIDISNLNKIQINYECNTVTVGSGAFLGQ FT VYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLT FT ANKNINSDLYWACRGGGGGNFRIVVSMTFKLPPKVDKVAVFNIYYTNPSKNTQLRFLDT FT WQNWITTTSNKINMKGSIVNSATDGVNIICTGLLYGTPKELYKLLVPFSKIEGYKLSYR FT YTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKNLINIINEERPNGSTTTELNV FT YGLGGQVSKINKKDTAFIIEIVII" FT misc_feature complement(314302..314760) FT /note="Pfam match to entry PF01565 FAD_binding_4, FAD FT binding domain, score 152.8, E-value 6e-43" FT /inference="protein motif:Pfam:PF01565" FT CDS 315150..316475 FT /transl_table=11 FT /locus_tag="CBO0267" FT /product="probable glycosyl hydrolase" FT /note="Similar to Klebsiella pneumoniae FT 6-phospho-alpha-glucosidase aglB SWALL:AGLB_KLEPN FT (SWALL:Q9AGA6) (440 aa) fasta scores: E(): 2.3e-79, 47.17 FT id in 443 aa" FT /db_xref="GOA:A5HYG0" FT /db_xref="InterPro:IPR001088" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR019802" FT /db_xref="InterPro:IPR022616" FT /db_xref="UniProtKB/TrEMBL:A5HYG0" FT /protein_id="CAL81819.1" FT /translation="MKKYNVVIVGGGSTFTPGFLKSFCRCKKDFPLNKLVLFDIDAERQ FT TPIGEFGQILMKENYEGLDFKYTTDIEEAYKDMDFVFMQMRVGGLHMRAKDEHIPLSMG FT LIGQETCGAGGMAYGLRSTKEMIKAIYDIRKYSPNAWILNYSNPAAIVAEALRREFPND FT NKILNICDQPENVVRSCSRLLGCDWETLDPVYFGLNHYGWFTHIYDKNTGEDLLPKLKE FT LIKEKGFLPQDAEQRDQSWLDTYGMVQTLMNDFPDYLPNTYDQYYLYPDYKASHLDPNF FT TRADEVMAHRENRVFTECRKVIDAGTTEGIIKIESDAHAEMMIEVAASIAYNKNKRYII FT IVENNGAINNMQDDAMVEVVAELGINGPRPMRVGNIPQFYLGLLVNQVSCEKLLIDAYY FT EKSYNKALQAFTINRLINDGKKARKVLDALIEANKGYWPELK" FT misc_feature 315162..316397 FT /note="Pfam match to entry PF02056 Glyco_hydro_4, Family 4 FT glycosyl hydrolase, score 358.7, E-value 6.6e-105" FT /inference="protein motif:Pfam:PF02056" FT CDS 316638..318161 FT /transl_table=11 FT /locus_tag="CBO0268" FT /product="PTS system, IIabc component" FT /note="Similar to Escherichia coli PTS system, maltose and FT glucose-specific IIabc component MalX or b1621 FT SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E(): FT 6.6e-55, 40.03 38d in 522 aa" FT /db_xref="GOA:A5HYG1" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011535" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:A5HYG1" FT /protein_id="CAL81820.1" FT /translation="MSKKNKIMDFFSALGRSLMLPIATLAAAGLILGLSSALLKPQIQA FT ALPFLQNSVGVYVLTLIKTITATVFGMIPVLFAICIAFGLAKEEKEIAAFAGFIGYYTF FT LLSASIIINSGAFNFASLKMSNILGIEKTIEMGAFAGILTGILTSMLHNKFYKIDFPIA FT IAFYGGKRFVAIVVIGAMTLLGQVMPFVWVPISSGINSLGSLIASSGHTGVFLFGFLER FT ILIPTGLHHVLNGVFRTTSVGGVYQGVEGCLNIFLQFFDKVDISQLKQFTAFLGQGKMP FT FMMFGLPAAAYAIYKTSPDNKKPKVKALMVAGVAASIVSGITEPLEFSFMFIAPQLFLF FT HAIMGGISFGILSLLGVAIGNTGGGIIDFLIYGVLVPGSRWYIVILVGIVFAVIYYMVF FT KWYFTNKNISIDVNEDVEEEDFSKDSSGKTNLAVKIINGLGGIDNIVAVNNCISRLRVD FT IKDMSLVNEDLLKKTGSMGIVKPSSTHIHVIYGPKVEKVAKQVKEAMKY" FT sig_peptide 316638..316770 FT /locus_tag="CBO0268" FT /note="probabilty 1.000, with cleavage site probability FT 0.923 between residues 45 and 46" FT /inference="protein motif:SignalP:2.0" FT misc_feature 316680..317675 FT /note="Pfam match to entry PF02378 FT PTS_EIIC,Phosphotransferase system, EIIC, score 195.9, FT E-value 6.5e-56" FT /inference="protein motif:Pfam:PF02378" FT misc_feature order(316686..316754,316797..316892,316911..316979, FT 317037..317090,317151..317219,317229..317297, FT 317448..317516,317559..317627,317646..317714, FT 317778..317846) FT /note="10 probable transmembrane helices predicted for FT CBO0268 by TMHMM2.0 at aa 17-39, 54-85, 92-114, FT 134-151,172-194, 198-220, 271-293, 308-330, 337-359 and FT 381-403" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 317931..318035 FT /note="Pfam match to entry PF00367 FT PTS_EIIB,phosphotransferase system, EIIB, score 56.9, FT E-value 4.5e-14" FT /inference="protein motif:Pfam:PF00367" FT CDS complement(318212..318979) FT /transl_table=11 FT /locus_tag="CBO0269" FT /product="transcriptional regulator of phosphosugar FT synthesis" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT HTH-type transcriptional regulator RpiR or alsr or b4089 or FT c5095 SWALL:RPIR_ECOLI (SWALL:P39266) (296 aa) fasta FT scores: E(): 1.4e-06, 21.23 38d in 226 aa, and to FT Enterococcus faecalis ef0065 or ef0539 SWALL:Q8KU94 FT (EMBL:AF454824) (272 aa) fasta scores: E(): 3.6e-14,29.09 FT 38d in 244 aa" FT /db_xref="GOA:A5HYG2" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYG2" FT /protein_id="CAL81821.1" FT /translation="MIDDLDEKILKKLTPNEKDLLNYINSNKFEIYKMSIHEFAQITYV FT STATVLRLCKKLGFNGFNELKFNLKKSITLKNKGYDSSIGLNGLLSRRLLELKETMLSL FT NLEQLDSIVDYLCSDKNIHIFGRGLTQMSLEYLYNILISLNRQCMFYLDPPLVYQTASQ FT MDENDVFIIGSFGGSTDPIVKAVEISKNNTGTVIAITSNPNSELAKKADIVLIGKTQNR FT FFSGIDINSRLSIQFIVEIIIELYMSRMNIVSH" FT misc_feature complement(318236..318643) FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 6.2, E-value 0.012" FT /inference="protein motif:Pfam:PF01380" FT misc_feature complement(318668..318973) FT /note="Pfam match to entry PF01418 HTH_6, Helix-turn-helix FT domain, rpiR family, score 37.0, E-value 4.4e-08" FT /inference="protein motif:Pfam:PF01418" FT misc_feature complement(318815..318880) FT /note="Predicted helix-turn-helix motif with score FT 1429.000, SD 4.05 at aa 34-55, sequence FT MSIHEFAQITYVSTATVLRLCK" FT CDS complement(318995..319774) FT /transl_table=11 FT /locus_tag="CBO0270" FT /product="RpiR-family transcriptional regulator" FT /note="Similar to Bacillus subtilis hth-type FT transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU FT (SWALL:P54717) (254 aa) fasta scores: E(): 1.6e-08, 23.55 FT 38d in 259 aa" FT /db_xref="GOA:A5HYG3" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYG3" FT /protein_id="CAL81822.1" FT /translation="MLDCIDNSILNTLTQSELSVLQYIDVHSNEVLTMSIQELSEKVFF FT STATILRLCKKLNLSGFSELKFTLKNNVSFNNSLKSTAVSTKKIVTDLYSEIENTGRLL FT DTKTLDTIVGYLLSNKKIHLFSYGLTNMAFEYMQRYLLATGRQTILYKTDTLAYKAVNN FT LTENDVLFLSSSTGSNPSTLKLAKIAKNSNTIIVAITPFTNNPLSKIADINLYTFIKER FT DFFDSDIKNRTCIFYIVDMIIECYIKYLDKSKFNNLY" FT misc_feature complement(319439..319774) FT /note="Pfam match to entry PF01418 HTH_6, Helix-turn-helix FT domain, rpiR family, score 28.5, E-value 2.2e-06" FT /inference="protein motif:Pfam:PF01418" FT misc_feature complement(319610..319675) FT /note="Predicted helix-turn-helix motif with score FT 1349.000, SD 3.78 at aa 34-55, sequence FT MSIQELSEKVFFSTATILRLCK" FT CDS 320050..320532 FT /transl_table=11 FT /locus_tag="CBO0271" FT /product="PTS system, glucose-specific IIa component" FT /EC_number="2.7.1.69" FT /note="Similar to Salmonella typhimurium, and Salmonella FT typhi PTS system, glucose-specific IIa component Crr or FT stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908) FT (168 aa) fasta scores: E(): 1.4e-13, 40.58 id in 138 aa" FT /db_xref="GOA:A5HYG4" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR011055" FT /db_xref="UniProtKB/TrEMBL:A5HYG4" FT /protein_id="CAL81823.1" FT /translation="MFSLFKKKEKNLKLKAYLSGKMISINKVPDEVFSSKIMGDGLAII FT PTTSIVKSPADGEITVVMEESKHAVGIKFENGVEALIHVGIDTVSMNGEGFEVFVKTGD FT SVKEGQDLIMFDEELIKNRGLSTYTMLVITNSSEYPNMVIEAEKEVKEKESVIITF" FT misc_feature 320137..320454 FT /note="Pfam match to entry PF00358 FT PTS_EIIA_1,phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 1, score 169.1, E-value FT 7.9e-48" FT /inference="protein motif:Pfam:PF00358" FT misc_feature 320278..320316 FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1." FT /inference="protein motif:ProSite:PS00371" FT misc_feature 320666..320725 FT /note="1 probable transmembrane helix predicted for CBO0272 FT by TMHMM2.0 at aa 13-32" FT /inference="protein motif:TMHMM:2.0" FT CDS 320699..321406 FT /transl_table=11 FT /locus_tag="CBO0272" FT /product="two-component response regulator" FT /note="Similar to Clostridium tetani two-component response FT regulator ctc00392 SWALL:Q898Q1 (EMBL:AE015937) (231 aa) FT fasta scores: E(): 1.4e-78, 90.47 38d in 231 aa" FT /db_xref="GOA:A5HYG5" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:A5HYG5" FT /protein_id="CAL81824.1" FT /translation="MIILYSIMIIEDDKKMAKLIENHLERYGYKTFSIKDFSNIKDEVL FT ECKPDLILMDINLPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITK FT PFSYYVLLAKIKGVLRRVYGSYAKNDTDFLKIDDLILYTNKSMLEFKGRKTELSKNEFS FT LLLYLLKNINKIVSRDTLLEILWSDTDFIDDNTLSVNVTRLRKRLEEVGITNAIETKRG FT QGYMLINKWESKE" FT misc_feature 320711..321067 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 77.2, E-value 3.6e-20" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 321152..321379 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 84.0, E-value 3.2e-22" FT /inference="protein motif:Pfam:PF00486" FT CDS 321407..322465 FT /transl_table=11 FT /locus_tag="CBO0273" FT /product="two-component sensor kinase" FT /note="Similar to Clostridium tetani two-component sensor FT histidine kinase ctc00393 SWALL:Q898Q0 (EMBL:AE015937) (352 FT aa) fasta scores: E(): 9.2e-107, 85.22 38d in 352 aa" FT /db_xref="GOA:A5HYG6" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="UniProtKB/TrEMBL:A5HYG6" FT /protein_id="CAL81825.1" FT /translation="MKKMKFIDFLKDRIAYIIVYFISISLVILIMHLTLFIKVIDFPIT FT NILYAYFVSIVILIIFLLYEYSKLRVFYKQIYRALNSEDIIEDIVNIGEARTREQKLFT FT ELLKKIHKSYEGKIYKYEDIQKHYSNFINQWVHQMKTPVSVINLILEEENPCECKEVFD FT SIGEENEKISQGLNIMLYNARINEFNHDFNVEDVDILFILRKVINDNKKLLIRHKIFPK FT IAGETTIVQTDKKWIYFVINQIVINAIKYTVATEKDKKTINLKIEEDTGKIIVSIEDNG FT IGIPKEDLGRVFNAFFTGKNGRKTSESTGMGMYLSKRICSELGNELYVESEEGEGTTFY FT IVFYKGKNIFKL" FT misc_feature order(321449..321517,321530..321598) FT /note="2 probable transmembrane helices predicted for FT CBO0273 by TMHMM2.0 at aa 15-37 and 42-64" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 321785..321970 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 13.6, E-value 0.0043" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 322100..322444 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 119.5, FT E-value 6.7e-33" FT /inference="protein motif:Pfam:PF02518" FT CDS 322585..323355 FT /transl_table=11 FT /locus_tag="CBO0274" FT /product="ABC transporter ATP-binding protein" FT /note="Similar to Clostridium tetani ABC transporter FT ATP-binding protein ctc00394 SWALL:Q898P9 (EMBL:AE015937) FT (256 aa) fasta scores: E(): 1.2e-81, 95.31 38d in 256 aa" FT /db_xref="GOA:A5HYG7" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5HYG7" FT /protein_id="CAL81826.1" FT /translation="MSILKVENITKIYGGKKGGMKFKALDKFSLEIEKGEFVGVMGPSG FT SGKTTLLNIMATIDTPTSGELFINGTNPIKLNEKNIALFRRKELGFIFQDFNLLDSLSI FT KENIILPLVLEKIKVREIEKKVEDIANLLNIKDILNKKPYEISGGQQQRAACARALIHN FT PSIILADEPTGNLDSKASQDVMETLTNLNDKKEATIMMVTHDPFSASFCKRIIMIKDGK FT YFLEIVNGGNRQAFFKEIMDSLSLLGSRSNNYTL" FT misc_feature 322687..323247 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 196.2, E-value 5.4e-56" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 322708..322731 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 323369..325339 FT /transl_table=11 FT /locus_tag="CBO0275" FT /product="ABC transporter permease protein" FT /note="Similar to Clostridium tetani ABC transporter FT permease protein ctc00396 SWALL:Q898P8 (EMBL:AE015937) (655 FT aa) fasta scores: E(): 5.2e-203, 90.24 38d in 656 aa" FT /db_xref="GOA:A5HYG8" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5HYG8" FT /protein_id="CAL81827.1" FT /translation="MTINNIVIKNIKGNLNKYAMYYLSNVIVVTIFFIFANFIYNPGVS FT SGNISDKTISEVASKLMYLCEFVIIIFTFIFSNYSITTFLKSREKEFGLLSMFGLTKNQ FT IRRYVMFENITISIVSIITGIFFGILFSKLFFMALSVILDLNAEIPFLISSKAVKITIL FT SFLVVLNLISFITSFKIKNNNIAELLKGERIPKTTPKFSKIKAILGIVLIISGYIVGIF FT SGTAIISTMIPILIVVIIGTKLLFSQFSVFFTNKLQNNKRIYYKGINLITLSQIIYKLK FT DNAKVLFITSILSGITLASAISVYSLQKVSLSSMEENCPQDIGIIEQGINSHKVIANGK FT VEDILKKCKFDIQYKNKIELIKAKNSDMVKENKKNPYNIKINKNDFNIMSENSFNELAK FT QYNKKPLDLKNGEVVIYTYDFTNNLANLKTELPFNHQKTLNLNIEGKASSFNILDNLKG FT GIINADSQNTNTLIVNNSDFKKLWSRVSNSNKYVYYGYNIKHNLKAVAAVTEIKNAVTK FT GQEAFFTERVISAASVMQLLSVLLFIGTFIAMIFFIATGSILYFKMFNEVQKDKQDFIG FT LKKIGVTQEEIKKIVSIQSFTMFFLPLTVAILHAAFAVKSVGLLYTKYFIFIAGIYLVL FT QIIYYLFAKWMYMKQINSWNI" FT misc_feature order(323429..323488,323546..323614,323693..323761, FT 323819..323887,323984..324052,324062..324130, FT 324224..324283,324983..325051,325142..325210, FT 325238..325297) FT /note="10 probable transmembrane helices predicted for FT CBO0275 by TMHMM2.0 at aa 21-40, 60-82, 109-131, FT 151-173,206-228, 232-254, 286-305, 539-561, 592-614 and FT 624-643" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 323531..323923 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 32.3, E-value 1.2e-06" FT /inference="protein motif:Pfam:PF02687" FT CDS 325579..326793 FT /transl_table=11 FT /locus_tag="CBO0276" FT /product="alanine racemase" FT /EC_number="5.1.1.1" FT /note="Similar to Treponema pallidum alanine racemase Alr FT or tp0681 SWALL:ALR_TREPA (SWALL:Q56346) (377 aa) fasta FT scores: E(): 9.7e-37, 35.93 38d in 384 aa, and to FT Clostridium acetobutylicum alanine racemase 1 Alr1 or FT cac0492 SWALL:ALR1_CLOAB (SWALL:Q97LR2) (386 aa) fasta FT scores: E(): 8e-87, 58.98 38d in 395 aa" FT /db_xref="GOA:A5HYG9" FT /db_xref="InterPro:IPR000821" FT /db_xref="InterPro:IPR001608" FT /db_xref="InterPro:IPR009006" FT /db_xref="InterPro:IPR011079" FT /db_xref="InterPro:IPR020622" FT /db_xref="UniProtKB/TrEMBL:A5HYG9" FT /protein_id="CAL81828.1" FT /translation="MFEHSRPAWIEINLDNLIHNMKEIRRVARSKEIISVVKADAYGHG FT ALEIASLLLENGANRLAVAVLSEALELRNSGITAPIIILGYTPLRYDERTICNNAETII FT KNDLEVSVSSYKYAEQLSKKAQQLGKDVKIHVNIDTGMGRLGFLPTEENLEKIYQISKL FT PNIIFEGLFSHFSTADEKNKEYTNEQFKKFLDFYYKLRDKNVKVNIKHIANSAALIDLP FT YTHLDAVRPGIAQYGYYPSSEVNHKDINLRPIMTLKTNIVLVKDIKSGQSISYGRKFRT FT IRNSKIAVLPIGYADGYERELSNENNVYKAQVIVNGRRAPIVGRITMDMCMIDVTDIGD FT VKVGDEVILIGECNDERISVEDIANLLNTIPYEVTSRISKRIPRYYIKDGKIVKISQIN FT KEVNK" FT misc_feature 325597..326301 FT /note="Pfam match to entry PF01168 Ala_racemase_N, Alanine FT racemase, N-terminal domain, score 291.9, E-value 8.3e-85" FT /inference="protein motif:Pfam:PF01168" FT misc_feature 325681..325713 FT /note="PS00395 Alanine racemase pyridoxal-phosphate FT attachment site." FT /inference="protein motif:ProSite:PS00395" FT misc_feature 325729..325755 FT /note="PS00572 Glycosyl hydrolases family 1 active site." FT /inference="protein motif:ProSite:PS00572" FT misc_feature 326338..326739 FT /note="Pfam match to entry PF00842 Ala_racemase_C, Alanine FT racemase, C-terminal domain, score 227.4, E-value 2.3e-65" FT /inference="protein motif:Pfam:PF00842" FT CDS 327313..328884 FT /transl_table=11 FT /locus_tag="CBO0277" FT /product="PTS system, IIbc component" FT /note="Similar to Bacillus subtilis PTS system,arbutin-like FT IIbc component GlvC or GlvCB or Glv-2 or bsu08200 FT SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta scores: E(): FT 8.6e-61, 36.41 38d in 530 aa, and to Klebsiella pneumoniae FT PTS system, alpha-glucoside-specific IIbc component AglA FT SWALL:PTAB_KLEPN (SWALL:Q9AGA7) (540 aa) fasta scores: E(): FT 3.3e-59, 35.53 38d in 529 aa" FT /note="Also highly similar to CBO0288 (53.2 38d)" FT /db_xref="GOA:A5HYH0" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011535" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:A5HYH0" FT /protein_id="CAL81829.1" FT /translation="MKDLIVDKMQMFAKAIIVPVLFLPIVGVILALSSILSNPSIVGES FT GLLMNIGKFISSGLWPIMTNLSIIFCVGIAMGLAKEKKAEAALVAVFSYLVYLGANNQW FT LTLTGKLVKYKVPADLYGTGQTLQLGFQVIDMGVFLGMILGVVVAIIHNKYCNKEFPGA FT FGLYGNTKLVFIVLTPITLILAVVFSYIWPVVAAGISALTGFINAAGAIGVFLYGFLNR FT FLIPTGLHHLIWTPFSYSNIGGELIINGQKYYGAYNIFLAQLTDPAIKVFDPSAKYLQY FT GMVKMFGLAGAALAFYKTSKPENKVKLKSILIPAVATSILVGITEPLEFTFLFVAPFLW FT VVHSVLDGIFEAVVSLLGVRTFAANGFIDFIAYNLPAGIAKTKWPIFIAVGLVQLAVYF FT FVFKFLIKKFNLKTPGREDKEVKLVTKKDFKENLAKASGEVAASKDSDLAGIVVEALGG FT KENIESVDNCFTRLRLKLKNIDVVDETALKGTGAAGVIKKGNNVQVIYGPKVNGIRNIV FT DKYLGN" FT sig_peptide 327313..327421 FT /locus_tag="CBO0277" FT /note="probabilty 0.749, with cleavage site probability FT 0.262 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature 327349..328356 FT /note="Pfam match to entry PF02378 FT PTS_EIIC,Phosphotransferase system, EIIC, score 205.0, FT E-value 1.2e-58" FT /inference="protein motif:Pfam:PF02378" FT misc_feature order(327370..327438,327481..327549,327568..327627, FT 327697..327765,327826..327894,327904..327972, FT 328144..328212,328270..328338,328357..328425, FT 328462..328530) FT /note="10 probable transmembrane helices predicted for FT CBO0277 by TMHMM2.0 at aa 20-42, 57-79, 86-105, FT 129-151,172-194, 198-220, 278-300, 320-342, 349-371 and FT 384-406" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 328657..328761 FT /note="Pfam match to entry PF00367 FT PTS_EIIB,phosphotransferase system, EIIB, score 52.9, FT E-value 7.6e-13" FT /inference="protein motif:Pfam:PF00367" FT CDS 329200..330525 FT /transl_table=11 FT /gene="glvA1" FT /gene_synonym="glvG1" FT /locus_tag="CBO0278" FT /product="maltose-6'-phosphate glucosidase" FT /EC_number="3.2.1.122" FT /note="Similar to Bacillus subtilis maltose-6'-phosphate FT glucosidase GlvA or GlvG or Glv-1 or bsu08180 FT SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): FT 3.5e-140, 77.44 38d in 439 aa" FT /note="Also similar to CBO0289 (73.69 38d) and CBO0267 FT (48.19 38d)" FT /note="Also highly similar to CBO0289 (73.69 38d)" FT /db_xref="GOA:A5HYH1" FT /db_xref="InterPro:IPR001088" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR019802" FT /db_xref="InterPro:IPR022616" FT /db_xref="UniProtKB/TrEMBL:A5HYH1" FT /protein_id="CAL81830.1" FT /translation="MKKFSVTIAGGGSTFTPGIILMLLDNLDKFPIKKLKLYDNDKERQ FT EIVAGACKVILKEKAPEIEFLATVDPEEAFTDIDFVMAHIRVGKYAMRELDEKIPLKYD FT VLGQETCGPGGMAYGMRSIGGVIEILDYMEKYSPNAWMLNYSNPAAIVAEATRRLRPNS FT KILNICDMPIGIEVRMAEILGLESRKDMSVRYYGLNHFGWWTDIRDKEGNDLMPKIKEH FT VSKHGYVVDKGDSQHTEASWNDTFAKAKDVYAVDPNTLPNTYLKYYLFQDYVVKHANKE FT YTRANEVMDGREKFVFGECKKVIEKQSTEGCELHIDEHACYIVDLARAIAYNTKERMLL FT IVENNGIIENFDSTAMVEVPCILGSNGPEPLAIGKIPQFQKGLMEQQVSVEKLVVEAWI FT EKSYQKLWQAITLSKTVPSASVAKNILDDLIEANKDYWPELK" FT misc_feature 329212..330447 FT /note="Pfam match to entry PF02056 Glyco_hydro_4, Family 4 FT glycosyl hydrolase, score 751.2, E-value 4.6e-223" FT /inference="protein motif:Pfam:PF02056" FT misc_feature 329611..329706 FT /note="PS01324 Glycosyl hydrolases family 4 signature." FT /inference="protein motif:ProSite:PS01324" FT CDS 330839..331348 FT /transl_table=11 FT /gene="ptsG" FT /gene_synonym="ptsX" FT /gene_synonym="crr" FT /locus_tag="CBO0279" FT /product="PTS system, IIa component" FT /EC_number="2.7.1.69" FT /note="Similar to Bacillus subtilis PTS FT system,glucose-specific IIabc component PtsG or PtsX or Crr FT or bsu13890 SWALL:PTGA_BACSU (SWALL:P20166) (699 aa) fasta FT scores: E(): 3.7e-24, 52.56 38d in 156 aa, and to FT Escherichia coli, Escherichia coli O6, and Shigella FT flexneri PTS system, glucose-specific IIa component Crr or FT Gsr or Iex or Tgs or TreD or b2417 or c2952 or sf2472 or FT s2618 SWALL:PTGA_ECOLI (SWALL:P08837) (168 aa) fasta FT scores: E(): 2.1e-22, 42.35 38d in 170 aa" FT /db_xref="GOA:A5HYH2" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR011055" FT /db_xref="UniProtKB/TrEMBL:A5HYH2" FT /protein_id="CAL81831.1" FT /translation="MFKKIKSLLSNDKSDVQQENLNEVFVSPISGEIISLDDVPDEVFS FT QRMMGDGFAIQPENGDVFSPVDGTITAVFPTKHAISIKSESGVEILIHFGLDTVNLNGE FT GFQVYVEEGNQVKAGDMLLKVNIEEIKDKVPSLIVPIIFMDLNGKNFSYNTGKVTAKEP FT NIITLK" FT misc_feature 330959..331273 FT /note="Pfam match to entry PF00358 FT PTS_EIIA_1,phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 1, score 206.5, E-value FT 4.2e-59" FT /inference="protein motif:Pfam:PF00358" FT misc_feature 331097..331135 FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1." FT /inference="protein motif:ProSite:PS00371" FT CDS 331631..332392 FT /transl_table=11 FT /locus_tag="CBO0280" FT /product="transcriptional regulator of phosphosugar FT synthesis" FT /note="Similar to Bacillus subtilis hth-type FT transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU FT (SWALL:P54717) (254 aa) fasta scores: E(): 3.9e-06, 26.17 FT 38d in 256 aa" FT /db_xref="GOA:A5HYH3" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYH3" FT /protein_id="CAL81832.1" FT /translation="MKLDISKIVDKYHLSKVEESILIYIINNIDHVKEIGVRGVAKEHY FT TSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNYFNSEKNNKYYGVELEELLALIEDK FT DISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKA FT KLLIAISKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDR FT NKLSNSFYPNALMLFEFLIGKYLERIKDDSV" FT misc_feature 331961..332365 FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 17.2, E-value 0.0022" FT /inference="protein motif:Pfam:PF01380" FT CDS complement(332429..332611) FT /transl_table=11 FT /locus_tag="CBO0281" FT /product="conserved hypothetical protein" FT /note="Similar to the C-terminal region of Clostridium FT acetobutylicum hypothetical protein Cac0806 SWALL:Q97KW0 FT (EMBL:AE007596) (209 aa) fasta scores: E(): 2.3e-07,51.56 FT 38d in 64 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYH4" FT /protein_id="CAL81833.1" FT /translation="MTLKSTYNYVIKAYGTGKVDHMKQVGCVNDLDKYRQEFHIEFHKN FT TKLIYSIRLENIPIK" FT CDS 332880..333077 FT /transl_table=11 FT /gene="cspA" FT /locus_tag="CBO0282" FT /product="cold shock protein" FT /note="Similar to Lactobacillus plantarum cold shock FT protein 2 CspL or Lp_0031 SWALL:CSP2_LACPL (SWALL:P96349) FT (66 aa) fasta scores: E(): 3.8e-15, 68.85 38d in 61 aa" FT /note="Also similar to CBO1387 (63.9 38d.) and CBO1772 (49. FT 38d.)." FT /db_xref="GOA:A5HYH5" FT /db_xref="InterPro:IPR002059" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR012156" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:A5HYH5" FT /protein_id="CAL81834.1" FT /translation="MNGTVKWFNGEKGFGFITGEDGNDVFAHFSQINSEGYKSLEEGQK FT VSYDVVKGPKGPQAENITII" FT misc_feature 332880..333074 FT /note="Pfam match to entry PF00313 CSD, 'Cold-shock' FT DNA-binding domain, score 137.6, E-value 2.4e-38" FT /inference="protein motif:Pfam:PF00313" FT misc_feature 332919..332975 FT /note="PS00352 'Cold-shock' DNA-binding domain signature." FT /inference="protein motif:ProSite:PS00352" FT CDS 333419..333973 FT /transl_table=11 FT /locus_tag="CBO0283" FT /product="putative membrane protein" FT /note="Similar to Enterococcus faecalis hypothetical FT protein ef0747 SWALL:Q837T3 (EMBL:AE016949) (236 aa) fasta FT scores: E(): 4.1e-24, 45.81 38d in 179 aa, and to FT Agrobacterium tumefaciens hypothetical protein atu1659 FT atu1659 or agr_c_3054 SWALL:Q8UEU5 (EMBL:AE009122) (217 aa) FT fasta scores: E(): 1.1e-21, 55.03 38d in 129 aa" FT /db_xref="InterPro:IPR010406" FT /db_xref="UniProtKB/TrEMBL:A5HYH6" FT /protein_id="CAL81835.1" FT /translation="MDDKNVMSYSKEELIRKILEKDKDLKGSDIDEELFHELISGKISK FT NINNTHDNNLTLGQRTADKIATFGGSWTFIITFCVVLSIWIIGNAVILINKAFDPYPFV FT FLNLILSCLAAIQAPIIMMSQNRQSERDRLTAANDYLVNLKSEIIIEDLYNKIDMLIDE FT QEEYKKNQEILLKKIEELKSN" FT misc_feature 333554..333943 FT /note="Pfam match to entry PF06210 DUF1003, Protein of FT unknown function (DUF1003), score 204.1, E-value 2.2e-58" FT /inference="protein motif:Pfam:PF06210" FT misc_feature order(333611..333679,333722..333790) FT /note="2 probable transmembrane helices predicted for FT CBO0283 by TMHMM2.0 at aa 65-87 and 102-124" FT /inference="protein motif:TMHMM:2.0" FT CDS 334408..334839 FT /transl_table=11 FT /locus_tag="CBO0284" FT /product="Rrf2-family transcriptional regulator" FT /note="Similar to Bacillus anthracis rrf2 family protein FT ba4743 SWALL:Q81L85 (EMBL:AE017038) (143 aa) fasta scores: FT E(): 2e-33, 65.03 38d in 143 aa" FT /db_xref="InterPro:IPR000944" FT /db_xref="UniProtKB/TrEMBL:A5HYH7" FT /protein_id="CAL81836.1" FT /translation="MKISSRFSVAVHILSILSMEDKNLCTSEWIAGSVNTNPVVIRRVM FT GMLKRAGLVNVIAGTGGAYLLKDLDQITLLDVYRAVDVVKEGELFQFHDSPNINCPIGA FT NIQSVMEGVLLNAQEAMEQVLENVTMEYIVTGIRKKIKK" FT misc_feature 334408..334782 FT /note="Pfam match to entry PF02082 Rrf2, Transcriptional FT regulator, score 16.0, E-value 9.2e-07" FT /inference="protein motif:Pfam:PF02082" FT CDS 334991..335596 FT /transl_table=11 FT /locus_tag="CBO0285" FT /product="putative isomerase" FT /note="Similar to Pseudomonas putida FT 2-hydroxychromene-2-carboxylate isomerase NahD FT SWALL:NAHD_PSEPU (SWALL:Q51948) (203 aa) fasta scores: E(): FT 0.00039, 24 38d in 200 aa, and to Burkholderia sp. DBT1 FT DbtD SWALL:Q93NA9 (EMBL:AF380367) (207 aa) fasta scores: FT E(): 1.9e-07, 25.37 38d in 201 aa" FT /db_xref="GOA:A5HYH8" FT /db_xref="InterPro:IPR001853" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR023169" FT /db_xref="UniProtKB/TrEMBL:A5HYH8" FT /protein_id="CAL81837.1" FT /translation="MSLNIKVYFDFVCPFCFLGEESLSEAIKGKDVNIQWMPFELRPEP FT SPRIDPWNDPSKLNAWNNFIDPIANKLGIDMKLPKLSPHPYTNLAFEGYHYASDHGKGD FT EYIKRVFKGFFQEELDIGKIEILANLSEEIGLNKEEFIKVLKNRKYKDKQEKALKHAYE FT EANITAVPTMIIGDEVVQGNTSKESLEKIINKQLIKNN" FT misc_feature 335000..335572 FT /note="Pfam match to entry PF01323 DSBA, DSBA-like FT thioredoxin domain, score 95.2, E-value 1.3e-25" FT /inference="protein motif:Pfam:PF01323" FT CDS 335623..336261 FT /transl_table=11 FT /locus_tag="CBO0286" FT /product="conserved hypothetical protein" FT /note="Similar to Chromobacterium violaceum hypothetical FT protein cv0714 SWALL:AAQ58390 (EMBL:AE016912) (212 aa) FT fasta scores: E(): 5.1e-27, 45.07 38d in 213 aa" FT /db_xref="GOA:A5HYH9" FT /db_xref="InterPro:IPR008030" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5HYH9" FT /protein_id="CAL81838.1" FT /translation="MKIALIGSTGNAGKVILKEALSRGHEVIAIARDVSKIKDTNENLT FT VMQGDILKLDTLGDKLGEVDVLVSAFGPKVGEEDTLIEATNNLITLAKKLGVKRLVVMG FT GAGSLKVQGDVELVNTEDFPEDWKPIALAHSKSLDIYRNEKEVNWAYLSPAALISSGVR FT TGEYSVGDEYLVVDEKGESKISFEDFAVAMIDEIENQKHIRSRFTVAYK" FT CDS 336699..337460 FT /transl_table=11 FT /locus_tag="CBO0287" FT /product="putative transcriptional regulator of FT phosphosugar synthesis" FT /note="Similar to Bacillus subtilis HTH-type FT transcriptional regulator GlvR or bsu08190 SWALL:GLVR_BACSU FT (SWALL:P54717) (254 aa) fasta scores: E(): 4.8e-07, 25.71 FT 38d in 245 aa" FT /db_xref="GOA:A5HYI0" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYI0" FT /protein_id="CAL81839.1" FT /translation="MDISKFIQNKGLTEIEIEVLNYMIDNINDINKMGVRGVAKNNFTS FT TSTIMRLAKKLGYSGFLEMQYNLLSLTKNELKDNLNDSSFIESLNMDSLLEENSTEAIN FT NFIDILFNDDHKFIFIYANGFSGIVAEYINKKLLVMGKRCILSNGTDSIGVFENNLDFI FT SAIIVISKSGETPMVLNKVKTAKEHNIKVISFTNERENSISKLSDIRFKIKDTNKLDDR FT NLMPNTFFPKVLVLIELLVYEYYKKKNSNVE" FT misc_feature 337020..337427 FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 3.9, E-value 0.016" FT /inference="protein motif:Pfam:PF01380" FT CDS 337567..339162 FT /transl_table=11 FT /locus_tag="CBO0288" FT /product="PTS system, IIbc component" FT /note="Similar to Escherichia coli PTS system, maltose and FT glucose-specific IIabc component MalX or b1621 FT SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E(): FT 1.5e-62, 38.43 38d in 523 aa, and to Bacillus subtilis PTS FT system, arbutin-like IIbc component GlvC or GlvCB or glv-2 FT or bsu08200 SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta FT scores: E(): 5.1e-61, 37.73 38d in 530 aa" FT /note="Also highly similar to CBO0277 (53.2 38d)" FT /db_xref="GOA:A5HYI1" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011535" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:A5HYI1" FT /protein_id="CAL81840.1" FT /translation="MGVTMMKEKILNQLQNFSKGMFVPVLILPIAGIIIAIGNILTNAK FT LAEYLPFLKNGMVFGLGKMLSGSLVSILTNLGIIFCVGLAVGLSKKKKAEAGFTSLLVF FT LVFINAMNIFLELNNRLAPQDALRGSGQTMVLGVQVLDMGVFLGIILGIVVAYIHNRFC FT EKEFDGAFQIYGGSRLVFIILIPITVFLAIILSYVWPSVQYLISSLGNFITGAGNFGIF FT TYGTLERLLIPTGLHHLVYTPFLYSPLGGVAEIGGKVFEGARNIYFAEMADPNIAKLSA FT SVIWDARGLSKMFGLIGACLAMYHTALPENKSKIKAILIPAAVTSILAGVTEPIEFSFM FT FVAPILFVIHAVLSGLGMVVLNILGVTAIGPNGLIDFLLYNIPLGVAKTGWPMFILIGL FT GQFVVYYVIFRFLIVKFKLKTPGREEDGNTKLYSKKDYKEKSKANTKSGDSSIAPIVVE FT GLGGKDNILKVDNCYTRLRLVVKDSSLVNEQLLKNETAANGVIIKGENVQVVYGLKVTS FT VRKSVDEYLGIESN" FT misc_feature 337618..338631 FT /note="Pfam match to entry PF02378 FT PTS_EIIC,Phosphotransferase system, EIIC, score 255.8, FT E-value 6.3e-74" FT /inference="protein motif:Pfam:PF02378" FT misc_feature order(337624..337692,337765..337833,337852..337911, FT 337969..338037,338098..338166,338179..338247, FT 338431..338490,338518..338586,338605..338673, FT 338737..338805) FT /note="10 probable transmembrane helices predicted for FT CBO0288 by TMHMM2.0 at aa 20-42, 67-89, 96-115, FT 135-157,178-200, 205-227, 289-308, 318-340, 347-369 and FT 391-413" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 338224..338286 FT /note="PS00079 Multicopper oxidases signature 1." FT /inference="protein motif:ProSite:PS00079" FT misc_feature 338923..339027 FT /note="Pfam match to entry PF00367 FT PTS_EIIB,phosphotransferase system, EIIB, score 60.4, FT E-value 4e-15" FT /inference="protein motif:Pfam:PF00367" FT misc_feature 338959..339012 FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT /inference="protein motif:ProSite:PS01035" FT CDS 339424..340758 FT /transl_table=11 FT /gene="glvA2" FT /gene_synonym="glvG2" FT /locus_tag="CBO0289" FT /product="maltose-6'-phosphate glucosidase" FT /EC_number="3.2.1.122" FT /note="Similar to Bacillus subtilis maltose-6'-phosphate FT glucosidase GlvA or GlvG or glv-1 or bsu08180 FT SWALL:GLVA_BACSU (SWALL:P54716) (449 aa) fasta scores: E(): FT 7.5e-125, 68.55 38d in 442 aa, and to Escherichia coli FT probable 6-phospho-alpha-glucosidase GlvG or b3681 FT SWALL:GLVG_ECOLI (SWALL:P31450) (212 aa) fasta scores: E(): FT 7e-59, 72.68 38d in 205 aa" FT /note="Also similar to CBO0278 (73.69 38d) and CBO0267 FT (49.21 38d)" FT /note="Also highly similar to CBO0278 (73.69 38d)" FT /db_xref="GOA:A5HYI2" FT /db_xref="InterPro:IPR001088" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR019802" FT /db_xref="InterPro:IPR022616" FT /db_xref="UniProtKB/TrEMBL:A5HYI2" FT /protein_id="CAL81841.1" FT /translation="MEQNKKFSIVIAGGGSTFTPGIVMMLLDNIHRFPLRKLKLYDNDG FT KRQETIGKALKILLKENAPEIEFTYTTDPKEAFTDVDFCMAHIRVGKYEMREKDEKIPL FT KYGVIGQETCGPGGIAYGMRSIGGMMELIDIMEKYSPNCWMLNYSNPAAIVAEACRILK FT PNSKVLNICDMPVGTLRRMSQIVGLTPKDLEVNYFGLNHFGWWTSVRDKQGNDLMPKLK FT AYVAENGYLNKVEVDTQHTEPSWQETHKKAKDLLAVEPNFLPNTYLKYYLYPDYVVEHS FT NAEYTRANEVMNGREKSVFSAAKEIIKAGTAKGGEFHIDSHASFIVDLARAIAYNTHER FT MLCIVENNGAIENFDPTAMVEVPCIVGSNGPEALVQGKIPQFEKGLMEQQVSVEKLVVE FT SWIEGSYQKLWQALTLSKTVPSASVAKAILDDLIEANKNYWPELK" FT misc_feature 339442..339501 FT /note="1 probable transmembrane helix predicted for CBO0289 FT by TMHMM2.0 at aa 7-26" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 339445..340680 FT /note="Pfam match to entry PF02056 Glyco_hydro_4, Family 4 FT glycosyl hydrolase, score 633.6, E-value 1.2e-187" FT /inference="protein motif:Pfam:PF02056" FT CDS 340771..341244 FT /transl_table=11 FT /locus_tag="CBO0290" FT /product="PTS system, IIa component" FT /note="Similar to Salmonella typhimurium, and Salmonella FT typhi PTS system, glucose-specific IIa component crr or FT stm2433 or sty2670 or t0424 SWALL:PTGA_SALTY (SWALL:P02908) FT (168 aa) fasta scores: E(): 3.7e-15, 40 38d in 150 aa" FT /db_xref="GOA:A5HYI3" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR011055" FT /db_xref="UniProtKB/TrEMBL:A5HYI3" FT /protein_id="CAL81842.1" FT /translation="MFQIFKKKKLYSPLSGKSVALSNVQDEVFSSLMMGDGIAIDPMDQ FT VIVAPCDCLVKLIMKGSKHALGLLMNNGVEILIHVGIDTVSLEGEGFEVLVEEGQKVKL FT GTPLLKFDKDYIISKGYSPMTMMIITEPNGSNINKKYEDITVEGGKTPVIEFS" FT misc_feature 340846..341163 FT /note="Pfam match to entry PF00358 FT PTS_EIIA_1,phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 1, score 153.8, E-value FT 3.1e-43" FT /inference="protein motif:Pfam:PF00358" FT misc_feature 340987..341025 FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1." FT /inference="protein motif:ProSite:PS00371" FT CDS 341382..343097 FT /transl_table=11 FT /locus_tag="CBO0291" FT /product="probable dehydratase" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 phosphogluconate dehydratase edd or b1851 or z2903 FT or ecs2561 SWALL:EDD_ECOLI (SWALL:P25530) (603 aa) fasta FT scores: E(): 5.8e-37, 31.08 38d in 505 aa, and to FT Clostridium acetobutylicum dihydroxyacid dehydratase FT cac3604 SWALL:Q97D76 (EMBL:AE007856) (572 aa) fasta scores: FT E(): 1.4e-145, 63.79 38d in 569 aa" FT /db_xref="GOA:A5HYI4" FT /db_xref="InterPro:IPR000581" FT /db_xref="InterPro:IPR015928" FT /db_xref="InterPro:IPR020558" FT /db_xref="UniProtKB/TrEMBL:A5HYI4" FT /protein_id="CAL81843.1" FT /translation="MISQDIRKIAPEMDPLRRGMGWSVEDLSKPQIIVESTFGDSHPGS FT AHLIKFANNAVQGVAERGGKAARYFATDICDGMAQGHDGINYSLASRDTITSLIEIHAN FT ATPFDGGVFISSCDKAVPSHLMAIGRLNIPSIVVTGGVMEAGPNLLTLEQIGAYSAMYQ FT RKEITEEELTYYKHNACPSCGACSFMGTASTMQVMAEALGLMLPGSALMPATCKDLEDV FT AVEAGKQVVELAKMNLKPKDIVTEKSFENAIIIHAAISGSTNSLLHIPAIAHEFGIKID FT EESFDRIHRYAPYLLNIRPAGKWPAEYFYYAGGVPAIMEEVKHLLHLDVMTVTGKTLGE FT NLEDLKKNGYYKNCDKYLKKVGLTRRDVIKPISEPIGENGAIAILKGNIAPEGAVVKHS FT AVPEEMHKGILKARPFDSEEEAISAIISKKINPGDAVFIRYEGPKGSGMPEMFYTTEAI FT SSDKELSASIALITDGRFSGASKGPAIGHVSPEAAMGGPIALVEENDLIEIDIEKRILQ FT LVGVNGQKLSEEAIDKVLVERKAKWEKRENKYKSGILKIFSERAVSPMKGGYME" FT misc_feature 341466..343094 FT /note="Pfam match to entry PF00920 ILVD_EDD, Dehydratase FT family, score 768.7, E-value 2.4e-228" FT /inference="protein motif:Pfam:PF00920" FT misc_feature 342786..342821 FT /note="PS00887 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 2." FT /inference="protein motif:ProSite:PS00887" FT CDS 343149..343796 FT /transl_table=11 FT /gene="kdgA" FT /locus_tag="CBO0292" FT /product="probable KDPG/KHG aldolase aldolase" FT /note="Similar to Bacillus subtilis khg/kdpg aldolase FT [includes: 4-hydroxy-2-oxoglutarate aldolase KdgA or FT bsu22100 SWALL:ALKH_BACSU (SWALL:P50846) (196 aa) fasta FT scores: E(): 4.1e-17, 35.6 38d in 191 aa, and to FT Streptococcus agalactiae 2-dehydro-3-deoxyphosphogluconate FT aldolase/4-hydroxy-2-oxoglutarate aldolase eda-2 or sag1907 FT SWALL:Q8DXE4 (EMBL:AE014277) (212 aa) fasta scores: E(): FT 1.6e-39, 54.76 38d in 210 aa" FT /db_xref="GOA:A5HYI5" FT /db_xref="InterPro:IPR000887" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5HYI5" FT /protein_id="CAL81844.1" FT /translation="MIKMKVLNALKKCKIVAVVRGETKEVGIKISESCIKGNVKAIEVA FT YTNKFANDIIEELSEKYSKDDEVVIGAGTVLDSETARMAILRGAKYIVSPSFSEETAKI FT CNRYNIPYIPGVMTITEIVTAYESGVDIVKVFPGSAFGQGYIKSIKGPLPYANIMVTGG FT VNLDNIDSWANTDVDLVGIGGELNKLGELGKFDEIELICNQYVDKFNKARGI" FT misc_feature 343164..343751 FT /note="Pfam match to entry PF01081 Aldolase, KDPG and KHG FT aldolase, score 90.0, E-value 4.9e-24" FT /inference="protein motif:Pfam:PF01081" FT CDS 343798..344802 FT /transl_table=11 FT /gene="kdgK" FT /locus_tag="CBO0293" FT /product="2-dehydro-3-deoxygluconokinase" FT /EC_number="2.7.1.45" FT /note="Similar to Escherichia coli FT 2-dehydro-3-deoxygluconokinase KdgK or b3526 FT SWALL:KDGK_ECOLI (SWALL:P37647) (309 aa) fasta scores: E(): FT 2e-08, 26.46 38d in 291 aa" FT /db_xref="GOA:A5HYI6" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:A5HYI6" FT /protein_id="CAL81845.1" FT /translation="MKVVGFGEILLRLSTKKGMLFLNSKEFDSNYGGGEANVLISLSRF FT DIETRMITKISKDQIGEGIINYLKEKSVETSFIKRENKRTPIYFVEVGSGNRSSKIIYD FT RDNSAFGSITEEDINIKEALKDVDVFHFSGITLAISEEVRKVTLNILKYCKNNNILVSY FT DSNYRAKMWSLEEARKATKEILPYINIFSAGILDAENILDMSCDLEDKYEKLNYYYKEI FT TKAYPNIKHIFSSTREIKSVSANSLQCNYYTNNKLYSSKKHTFDDIIDRIGAGDALTAG FT VIYSIINKKSPQYTCEFATACSVLKHSIHGDANLVNVEEVENLISNGIGRISR" FT misc_feature 343801..344760 FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 95.5, E-value 1.1e-25" FT /inference="protein motif:Pfam:PF00294" FT CDS 345062..346861 FT /transl_table=11 FT /gene="adeC" FT /gene_synonym="ade" FT /locus_tag="CBO0294" FT /product="adenine deaminase" FT /EC_number="3.5.4.2" FT /note="Similar to Bacillus subtilis adenine deaminase AdeC FT or Ade or bsu14520 SWALL:ADEC_BACSU (SWALL:P39761) (577 aa) FT fasta scores: E(): 5e-63, 36.17 38d in 575 aa" FT /db_xref="GOA:A5HYI7" FT /db_xref="InterPro:IPR006679" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:A5HYI7" FT /protein_id="CAL81846.1" FT /translation="MFNKFDTKPLWEVSKTLSSVAQGLEPADMVIINSRLINVCTREVI FT ENTDVAISCGRIALVGDAKHCIGENTEVIDAKGQYIAPGFLDGHIHVESSMLSVSEYAR FT SVVPHGTVGIYMDPHEICNVLGLNGVRYMIEDGKGTPLKNMVTTPSCVPAVPGFEDTGA FT AVGPEDVRETMKWDEIVGLGEMMNFPGILYSTDHAHGVVGETLKASKTVTGHYSLPETG FT KGLNGYIASGVRCCHESTRAEDALAKMRLGMYAMFREGSAWHDLKEVSKAITENKVDSR FT FAVLISDDTHPHTLLKDGHLDHIIKRAIEEGIEPLTAIQMVTINCAQCFQMDHELGSIT FT PGKCADIVFIEDLKDVKITKVIIDGNLVAKGGLLTTSIAKYDYPEDAMNSMHIKNKITP FT DSFNIMAPNKEKITARVIEIIPERVGTYERHVELNVKDDKVQCDPSKDVLKAVVFERHH FT ETGTAGYGFVKGFGIKRGAMAATVAHDAHNLLVIGTNDEDMALAANTLIECGGGMVAVQ FT DGKVLGLVPLPIAGLMSNKPLEEMAEMVEKLDSAWKEIGCDIVSPFMTIALIPLACLPE FT LRLTNRGLVDCNKFEFVSLFVEE" FT misc_feature 345299..346114 FT /note="Pfam match to entry PF01979 FT Amidohydro_1,Amidohydrolase family, score 97.0, E-value FT 3.9e-26" FT /inference="protein motif:Pfam:PF01979" FT CDS 347264..347941 FT /transl_table=11 FT /gene="cssR" FT /locus_tag="CBO0295" FT /product="two-component response regulator" FT /note="Similar to Bacillus subtilis transcriptional FT regulatory protein CssR or bsu33010 SWALL:CSSR_BACSU FT (SWALL:O32192) (225 aa) fasta scores: E(): 1.1e-40, 50.89 FT id in 224 aa" FT /db_xref="GOA:A5HYI8" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:A5HYI8" FT /protein_id="CAL81847.1" FT /translation="MGRKVYLVEDEKSLNILLEKYLQREGYEVTTFFNGSSAIERIKDV FT PDIWILDIMLPDIDGYQIIKAVKENNKNTPVIFMSARNEELDRVVGLELGSDDYLSKPF FT LPRELIIRTNKLMERIYGKSNNSTVDIITNIGQYKISKKQRTVFFEEKEIQLTNKEFEL FT LNFFIENKNNVISREQILISIWGEDYFGSDRVIDDTIRRLRKKMDKLDLETVYGYGYKL FT VVK" FT misc_feature 347270..347626 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 104.9, E-value 1.6e-28" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 347714..347929 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 78.5, E-value 1.4e-20" FT /inference="protein motif:Pfam:PF00486" FT CDS 347941..349326 FT /transl_table=11 FT /gene="cssS" FT /locus_tag="CBO0296" FT /product="two-component sensor kinase" FT /EC_number="2.7.3.-" FT /note="Similar to Bacillus subtilis sensor protein CssS or FT bsu33020 SWALL:CSSS_BACSU (SWALL:O32193) (451 aa) fasta FT scores: E(): 9e-33, 30.17 38d in 464 aa" FT /db_xref="GOA:A5HYI9" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HYI9" FT /protein_id="CAL81848.1" FT /translation="MKRLRFKSLTMRIWTTFTAIILIIICSISFLYLVAFKRISENSRL FT EDLEVAHDVLLNSNNLNEQNRFDELKNLKGSDHFIVKIDENDKYKIIDIGKRKEEPPPI FT EKKNPPPGPASDGIKMWMASYIIGNNIQQKQFKEYHNNMKFIFIISSIKNTGGEKLYLI FT SYIPEIQDNVLLYTVIIIGIIFIGIGFFTAKLVANYISRPLRELEDYTVKIAHKDWREP FT IKIKNDDEIGRLVDSMNRMQKELKKIDEEEKMFLQSISHDLKTPVMVIMSHAQAIIDGM FT YIESVEETAEIIKDEAAILEKKIKQLLYLNTLAYTLENDSENIGFELHNLLFNIISRFE FT IVNSKIQWNLDIDKVVIKGNAEKIQVAIENILDNGLRYAERKIAITLKKENSVAVLEIY FT NDGPNIDKNNIEHIFENLYKDRTGNFGLGLAISKKIIDFYNGEIKAVNRDNGVSFIIKY FT PID" FT sig_peptide 347941..348049 FT /gene="cssS" FT /locus_tag="CBO0296" FT /note="probabilty 0.999, with cleavage site probability FT 0.489 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(347977..348045,348457..348525) FT /note="2 probable transmembrane helices predicted for FT CBO0296 by TMHMM2.0 at aa 13-35 and 173-195" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 348472..348681 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 60.3, E-value 4.2e-15" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 348691..348888 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 36.3, E-value 7.6e-08" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 349015..349323 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 84.0,E-value 3.3e-22" FT /inference="protein motif:Pfam:PF02518" FT CDS 349611..350579 FT /transl_table=11 FT /locus_tag="CBO0297" FT /product="probable glycosyl transferase" FT /note="Similar to Escherichia coli bactoprenol glucosyl FT transferase homolog from prophage cps-53 yfdh or b2351 FT SWALL:GTRB_ECOLI (SWALL:P77293) (306 aa) fasta scores: E(): FT 2.1e-39, 40.26 38d in 298 aa" FT /db_xref="GOA:A5HYJ0" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:A5HYJ0" FT /protein_id="CAL81849.1" FT /translation="MINKIVYSIIVPLYNEELVIDESYRRLKAVMDSTKENYEIIFIND FT GSRDSTKEKADNICKKDEKIKLVNFSRNFGHQAAITAGMDVSIGRAIVVIDADLQDPPE FT VILKMIEKWKDGYEVIYGKRAKREGEGFFKKFTAGMFYRLLKNITNIDIPVDTGDFRLI FT DRKVCDTLTSLPEKNRYVRGLVSWVGYKQTAVEFVRQERFAGETKYPLKKMLKLAFDGI FT TSFSYKPLTIASYAGGIIFSIGTIVFITEIIKAVINCTDILSLGMILSINLIMFGLIFF FT TIGIMGQYIGRIFDESKNRPMYIIDNTINYEKADKKYEINN" FT misc_feature 349632..350126 FT /note="Pfam match to entry PF00535 Glycos_transf_2,Glycosyl FT transferase, score 131.5, E-value 1.6e-36" FT /inference="protein motif:Pfam:PF00535" FT misc_feature order(350301..350369,350412..350480) FT /note="2 probable transmembrane helices predicted for FT CBO0297 by TMHMM2.0 at aa 231-253 and 268-290" FT /inference="protein motif:TMHMM:2.0" FT CDS 350563..350982 FT /transl_table=11 FT /locus_tag="CBO0298" FT /product="teichoic acid glycosylation protein" FT /note="Similar to Actinobacillus actinomycetemcomitans FT dTDP-glucose-4-keto-6-deoxy-D-glucose reductase Fcd FT SWALL:Q9AQB3 (EMBL:AF213680) (130 aa) fasta scores: E(): FT 1.3e-05, 30.46 38d in 128 aa, and to Listeria innocua FT teichoic acid glycosylation protein GtcA SWALL:Q9KJU8 FT (EMBL:AF160251) (145 aa) fasta scores: E(): 0.0023, 25.58 FT id in 129 aa" FT /db_xref="GOA:A5HYJ1" FT /db_xref="InterPro:IPR007267" FT /db_xref="UniProtKB/TrEMBL:A5HYJ1" FT /protein_id="CAL81850.1" FT /translation="MKLITKVNKCIFHGKFKHISRFSMVGVANTTIDFLMFTVFNELVG FT VGYITSQIIGYSFGIMNSFIFNKKWTFKERKVSKKVLYELMQFIIINLISLIITVFVMN FT LLAKNFNIDVYLAKVIVTIIAQVTNFVAYKFIVFK" FT misc_feature 350623..350976 FT /note="Pfam match to entry PF04138 GtrA, GtrA-like protein, FT score 93.7, E-value 4e-25" FT /inference="protein motif:Pfam:PF04138" FT misc_feature order(350689..350757,350815..350883,350902..350970) FT /note="3 probable transmembrane helices predicted for FT CBO0298 by TMHMM2.0 at aa 50-72, 92-114 and 121-143" FT /inference="protein motif:TMHMM:2.0" FT CDS 351101..353374 FT /transl_table=11 FT /locus_tag="CBO0299" FT /product="putative dolichyl-phosphate-mannose-protein FT mannosyltransferase" FT /note="Similar to Streptomyces carzinostaticus subsp. FT neocarzinostaticus membrane protein SWALL:Q84HC4 FT (EMBL:AY117439) (720 aa) fasta scores: E(): 2.4e-25,27.37 FT 38d in 767 aa" FT /db_xref="GOA:A5HYJ2" FT /db_xref="UniProtKB/TrEMBL:A5HYJ2" FT /protein_id="CAL81851.1" FT /translation="MKKIKFTKENIALSLILILSLILNLANLNIEGYANQYYAAGVKSM FT TLSLKNFFFISFDPASFVSIDKPPLGFWIQAIFAKIFGFSGWSIILPQAIAGVVSVGLI FT YVIVKRSFGTAAGLISAICLAVTPVFVAVSRNNTCDNLLVLTLLLACLVLSKAAEKGKL FT KYLLISLAIIGIGFNIKMLQAYMIIPAIYITYLLSNAVSFKKRIVHLMAGTIILILVSL FT SWAFIVDLIPEGNRPYVGSSTNNSVMELIIGHNGLERLGIGSKSTQGGGAPGGMDGKNQ FT QKTDGTSSATKNKNSEQTSKENGQTGGETPSIDNDQMQGQPPSMDNGEMQGTPPNTQDG FT GKGNANPPNGDGKGPGGMPPGDNGMQKPNGGGMGETFGGQEVASITRLFSNNSLSDQII FT WLFPLAVFGFIAAAIKEKLNKTSDNKRKLSLVLWSMWLLPEFIYFSFIKGLFHPYYLTM FT LAPPISALVGIGVVSMWKLYNENGWKSWILPVALIADGLTQILILSYYYNISNTAKILT FT TIVAVLCIVSSIILAIVNLRKNKKDILKFKNIKFKKSLVTIALMGLLITPLVCSATTIF FT YPVSGTFPSAGLSLMTNKEKDGFNMGDPNSGNTKLIEFLKSHKTNEKYLLVTSSTNGYA FT SDIIINTGESVMALGGFFGTDKVITLDEFKKLVNNGEIRYVMVGGMGGNSSSDIMNWVK FT ENGKVVSESEWKDSNEINSEGVNKDNNNKENSNSNTKQFGQEGKGNSEQLYDLKNYTDT FT TTKK" FT sig_peptide 351101..351197 FT /locus_tag="CBO0299" FT /note="probabilty 0.996, with cleavage site probability FT 0.447 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 351134..351793 FT /note="Pfam match to entry PF02366 FT PMT,Dolichyl-phosphate-mannose-protein FT mannosyltransferase,score 72.9, E-value 6.9e-19" FT /inference="protein motif:Pfam:PF02366" FT misc_feature order(351137..351196,351254..351322,351356..351424, FT 351434..351502,351521..351574,351611..351679, FT 351716..351784,352292..352345,352382..352441, FT 352451..352519,352553..352621,352634..352702, FT 352763..352831) FT /note="13 probable transmembrane helices predicted for FT CBO0299 by TMHMM2.0 at aa 13-32, 52-74, 86-108, FT 112-134,141-158, 171-193, 206-228, 398-415, 428-447, FT 451-473,485-507, 512-534 and 555-577" FT /inference="protein motif:TMHMM:2.0" FT CDS 353730..354767 FT /transl_table=11 FT /locus_tag="CBO0300" FT /product="AraC-family transcriptional regulator" FT /note="Similar to Clostridium tetani transcriptional FT regulatory protein ctc01411 SWALL:Q894X3 (EMBL:AE015941) FT (329 aa) fasta scores: E(): 4.8e-11, 27.5 38d in 349 aa" FT /db_xref="GOA:A5HYJ3" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5HYJ3" FT /protein_id="CAL81852.1" FT /translation="MKHKFHINTKQGCSSMIMQYSSIRTQFATIRDSMNFNDEKEVIYD FT IKPQYGKGCIKFYKLMGNVMLIIYDTIFNHDMITEFDLSEEYFEIEYCVDGCLNIHEDK FT VGNMCLSKNELSISMSRETCGKVINCAGQKYQGISITTEKSAIASYFGSCGIELWEDTI FT EELENELRNQYYQGINVSLEIANIFLQIFNCSLPEKSKILFFESKVMEILSKIVSYEIL FT GTNKINQLQMDEFEINQIKKIPEVLMKNLYELPTVNILSKQLAINKNKLAKGFKVIYGD FT TIFRYHRKMCLERAAILLIDTDKSINEIALDVGYSNPSNFCYAFKKEFGVTPLQYKDDS FT LKLVN" FT misc_feature 354609..354743 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 50.5, E-value 3.9e-12" FT /inference="protein motif:Pfam:PF00165" FT CDS 355032..356063 FT /transl_table=11 FT /locus_tag="CBO0301" FT /product="putative iron(III)-binding periplasmic protein" FT /note="Similar to Clostridium tetani putative iron(III) FT dicitrate-binding periplasmic protein ctc00960 SWALL:Q896P0 FT (EMBL:AE015939) (354 aa) fasta scores: E(): 4.9e-30, 32 38d FT in 350 aa" FT /db_xref="GOA:A5HYJ4" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:A5HYJ4" FT /protein_id="CAL81853.1" FT /translation="MLKKCVALFIGVIFILGLVGCSQSTQGQNGKGKTIGEQEQKQNKS FT KSNYPVNIKVYTDEGKEIVQTIQKEPKRVVIMGQSMAELMIKFGLQDKVVGVGYLDKSF FT SKYDDEISKMPIIAKSWPSKEAIIALKPDIIYSMSSAFKEDRVGDIYSWNDRGIPVLPA FT VNFTIGRSIDEYFKDIKNFGLAFNIENETNKYLKEQKDRMDKVKEVAKKAKTTPNVLLV FT ASAGRENYDYYPPSGCIIDEVIEGAGGKYIELSKDSYMEMSIESIIAANPEKIIITEFQ FT GSDREKIKNKILSNKRLQNVIAIKTGNVMVVDYTNAIRGSLELSDLYEDVAKFIHPELF FT GGN" FT sig_peptide 355032..355110 FT /locus_tag="CBO0301" FT /note="probabilty 0.999, with cleavage site probability FT 0.602 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature 355044..355112 FT /note="1 probable transmembrane helix predicted for CBO0301 FT by TMHMM2.0 at aa 5-27" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 355062..355094 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 355110..355133 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 355242..355976 FT /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic FT binding protein, score 51.7, E-value 1.7e-12" FT /inference="protein motif:Pfam:PF01497" FT CDS 356066..357184 FT /transl_table=11 FT /locus_tag="CBO0302" FT /product="putative iron(III) transport system, permease FT protein" FT /note="Similar to Bordetella avium BhuU bhuU SWALL:Q8L1U4 FT (EMBL:AY095952) (334 aa) fasta scores: E(): 1.2e-35,38.69 FT 38d in 336 aa, and to Clostridium tetani iron(iii) FT dicitrate transport system permease protein fecd or FT ctc00961 SWALL:Q896N9 (EMBL:AE015939) (377 aa) fasta FT scores: E(): 9.5e-69, 53.93 38d in 343 aa" FT /db_xref="GOA:A5HYJ5" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5HYJ5" FT /protein_id="CAL81854.1" FT /translation="MLQTGKVGVAESNAENYGCTFKKHSLFTTIIIGLVTILILSIIIS FT VSIGQVSIPFSQSYRILIYKLTGLQTGNLDQFMNGMFEEIIWQIRFPRVLLAMIAGIGL FT TLCGVVMQASVQNPLADPYILGISSGASLGATFSIMIGFGAAGTLSELGVAFWAFIGAF FT GAGALVMGLASIGGKMSSVKLVLAGTVINALCNAISSFIVYFAKDAEGIRSVTFWTMGS FT LTSAQWGKLPIITTIVMLAVVLFLSQARIMNTMMMGEETAVTLGINLNFYRRLYMVISV FT AVTGVIVATCGIIGFVGLIVPHIVRSIVGSDNKRLLPTSILFSAIFLIWADIFARTIIP FT NGELPIGIITSLLGAPVFMYMLVKRSYGFGGK" FT misc_feature order(356141..356209,356330..356398,356432..356500, FT 356528..356596,356615..356683,356741..356809, FT 356897..356965,357008..357067,357086..357154) FT /note="9 probable transmembrane helices predicted for FT CBO0302 by TMHMM2.0 at aa 26-48, 89-111, 123-145, FT 155-177,184-206, 226-248, 278-300, 315-334 and 341-363" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 356210..357157 FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 348.0, E-value 1.1e-101" FT /inference="protein motif:Pfam:PF01032" FT CDS 357186..357956 FT /transl_table=11 FT /locus_tag="CBO0303" FT /product="putative iron(III) transport system, ATP-binding FT protein" FT /note="Similar to Streptococcus agalactiae FhuC fhuC FT SWALL:Q8VQV6 (EMBL:AF452237) (264 aa) fasta scores: E(): FT 5.2e-26, 31.9 38d in 257 aa, and to Clostridium tetani FT putative hemin transport system ATP-binding protein fece FT fece or ctc00962 SWALL:Q896N8 (EMBL:AE015939) (252 aa) FT fasta scores: E(): 4.8e-47, 55.15 38d in 252 aa" FT /db_xref="GOA:A5HYJ6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HYJ6" FT /protein_id="CAL81855.1" FT /translation="MNLKVDNIFVTLSGRKIVKDISLQVDDGKFVGIIGPNGCGKSTLL FT KSIYKVINPEKGSVFLGEKDVLKSKAKSVSKEMGVVGQFNDLSFDFSVYDMVMMGRTPH FT KNLMEPDNKEDYEIVHNALKKVNLTTYSDRSYLTLSGGEKQRVILARAIAQEPKFLILD FT EPTNHLDIKYQLQIFSIVKSLKIGVLAALHDLSMAATYCDILYVVKNGEIVTYGKPNEI FT LTKELIKSVYEIDCEIYTNPITGEMAIAYKMPKY" FT misc_feature 357267..357818 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 199.1, E-value 7.1e-57" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 357288..357311 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 357600..357644 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 357992..359320 FT /transl_table=11 FT /locus_tag="CBO0304" FT /product="putative drug/sodium antiporter" FT /note="Similar to Clostridium acetobutylicum probable FT cation efflux pump cac3354 SWALL:Q97DW6 (EMBL:AE007832) FT (452 aa) fasta scores: E(): 9.7e-57, 38.73 38d in 426 aa" FT /db_xref="GOA:A5HYJ7" FT /db_xref="InterPro:IPR002528" FT /db_xref="InterPro:IPR015522" FT /db_xref="UniProtKB/TrEMBL:A5HYJ7" FT /protein_id="CAL81856.1" FT /translation="METDMTKGKPMGIIVKFFIPMFIGNLFQQIYNVVDSIVIGRFVGN FT EAFAAVGSCFLIMSFMTSILIGLAMGASAFFSQLYGAKQYDEMKKAISTSFFFILSISI FT LLSLITNVFLYEIIELFQMPKDTVTYSAEYLRYILTGLIFTGLYNICAYLLRSIGDSKS FT PLYFLIVSCILNTILDLIFVLVFNMGVSGVGLATFIAQGLSALWCAFYTVKHMKFLDFK FT RKDIVFSRKLFRTILSYSVLTAVQQSLSSFGMLMIQGLINTFGTTVMAAFAACSKIDEF FT ANRPLQDLSNAFSTYVAQNKGAGNIERIRQGFYAILKVIALISFIISIVVFIFAPNLIS FT IFVKKESIDIIQVGVGYLRIVCIFYILLGCIVMFYGFFRGMGEVNISIILTVVSQGIRV FT ALAYGLARTSMGFTGICWSIVIGWLLSNALGRFMYKKVMANPI" FT misc_feature order(358025..358093,358136..358204,358265..358333, FT 358391..358459,358478..358546,358556..358624, FT 358685..358738,358751..358819,358928..358996, FT 359054..359122,359141..359209,359222..359281) FT /note="12 probable transmembrane helices predicted for FT CBO0304 by TMHMM2.0 at aa 12-34, 49-71, 92-114, FT 134-156,163-185, 189-211, 232-249, 254-276, 313-335, FT 355-377,384-406 and 411-430" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 358049..358534 FT /note="Pfam match to entry PF01554 MatE, MatE, score 133.2, FT E-value 5e-37" FT /inference="protein motif:Pfam:PF01554" FT misc_feature 358718..359203 FT /note="Pfam match to entry PF01554 MatE, MatE, score FT 95.8,E-value 8.9e-26" FT /inference="protein motif:Pfam:PF01554" FT CDS complement(359465..360436) FT /transl_table=11 FT /locus_tag="CBO0305" FT /product="AraC-family transcriptional regulator" FT /note="Similar to Clostridium tetani transcriptional FT regulatory protein ctc00913 SWALL:Q896T5 (EMBL:AE015939) FT (334 aa) fasta scores: E(): 1.4e-09, 26.42 38d in 333 aa" FT /db_xref="GOA:A5HYJ8" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5HYJ8" FT /protein_id="CAL81857.1" FT /translation="MKIDETMKVIKKFALQLNCKEYDYGNGHIHRLPKENGDSWFVEVN FT PADGLLLSDAYFSLLKPVTYIYNIPNNHILICSLYSGNITVVENGKKSKRLYQGIHFFV FT NRGKKIKIIINTDEPIWYTFALVFEVFILKYIKDFLSQASYILSKDILLKPNYFNTPEL FT LMIFEQLKYTIRSCDLPHMYYIGKIYEIFAIIIRNLENEKYLNIPRHNHLSYQNKQFMW FT TLKEEIDKNILNPPTIEEMKNIAEMSESKLRRCFKATYGKTIYEYIRYKKMEQAIRFLS FT HDEMSIHNISTTLGYESPSKFSAAFKKVYGITPSAFRKSFNL" FT misc_feature complement(359480..359614) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 45.8, E-value 1e-10" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(359495..359623) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature complement(359630..359770) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 13.7, E-value 0.074" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(359666..359731) FT /note="Predicted helix-turn-helix motif with score FT 1093.000, SD 2.91 at aa 236-257, sequence FT PTIEEMKNIAEMSESKLRRCFK" FT repeat_region 360511..360544 FT /rpt_family="CB.431" FT /rpt_type=DIRECT FT /rpt_unit_seq="ttaattttaaaactgtaaatataaataatacatt" FT /inference="ab initio prediction:REPuter" FT repeat_region 360546..360593 FT /rpt_family="CB.940" FT /rpt_type=DIRECT FT /rpt_unit_seq="ataaagtaattcattttgctaagaagttctaaatttaactccat FT taaa" FT /inference="ab initio prediction:REPuter" FT CDS 360883..361821 FT /transl_table=11 FT /locus_tag="CBO0306" FT /product="putative ferrichrome-binding protein" FT /note="Similar to Bacillus subtilis ferrichrome-binding FT protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU FT (SWALL:P37580) (315 aa) fasta scores: E(): 5.4e-25, 31.73 FT id in 312 aa. Also similar to CBO0310 35.144 38dentity in FT 313 aa overlap" FT /db_xref="GOA:A5HYJ9" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:A5HYJ9" FT /protein_id="CAL81858.1" FT /translation="MKSTKGKLIFTLCLILMFSVLVIGCSKSTSTNSGGESDKDHKTRT FT ISTAMGKVEVPANPKRIVINYFQGDLLALGVKPLATSRMEGDSALKNELKGVKIVEKWE FT PEEIMAFKPDLIIVISEEEYKKFNKIAPIVLIPFTKISSEERLTLIAEAVGKQEEAKKV FT INNFKNKVETSKKKLEAAGVMDKTFTLIEQDTKQITVFGNKWGRGGEILYDYLGVKAPN FT VIKKEIINGEQYKNVSLEAFPEYSGDYIIQAVWNYGGDNLKDNNLWINLPAAKENRVIK FT TDWNLFFYKDLYSMDKQLDYIVNAILKTTKK" FT sig_peptide 360883..360964 FT /locus_tag="CBO0306" FT /note="probabilty 1.000, with cleavage site probability FT 0.273 between residues 28 and 29" FT /inference="protein motif:SignalP:2.0" FT misc_feature 360901..360954 FT /note="1 probable transmembrane helix predicted for CBO0306 FT by TMHMM2.0 at aa 7-24" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 360925..360957 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 361057..361740 FT /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic FT binding protein, score 110.0, E-value 4.9e-30" FT /inference="protein motif:Pfam:PF01497" FT CDS 361882..361998 FT /transl_table=11 FT /locus_tag="CBO0307" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYK0" FT /protein_id="CAL81859.1" FT /translation="MDIYIAWKAIFNKNTFCINKKAVDKIYLSTAYGVVVLA" FT CDS complement(362160..363128) FT /transl_table=11 FT /locus_tag="CBO0308" FT /product="AraC-family transcriptional regulator" FT /note="Similar to Clostridium tetani transcriptional FT regulatory protein ctc01411 SWALL:Q894X3 (EMBL:AE015941) FT (329 aa) fasta scores: E(): 7.3e-10, 22.29 38d in 323 aa" FT /db_xref="GOA:A5HYK1" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5HYK1" FT /protein_id="CAL81860.1" FT /translation="MVKYSDSSWSALADKYNLVKRPYGKGQIYDFPPHWSNGWIAEVNP FT AKGLFVSSAWFTPSEQIVYTINSSNPFMMLFCIDCGEIVYSQQGKKKQALFPITHLIIN FT PQKQFTFTFFKDVHYCFTSILIFDDFIKPFLKERTNAPRISVEDAKLWKTQHYNTPDIM FT LIFEQIRWAVRNTDMPLLSFEGMTLHLLSSITRNFPDIPKRRSNRRHYVTWENEQKIYK FT VKNKIDEDILNLPDTIELCRIAGMSESKLRQSFKNHYGIPLYRYIRIETMKRAMQLLSA FT DHLSIRNISELCGYKNPAKFAAAFKNIHGITPSDFRKSFNL" FT misc_feature complement(362175..362309) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 36.9, E-value 4.9e-08" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(362325..362465) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 8.4, E-value 0.31" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(362361..362426) FT /note="Predicted helix-turn-helix motif with score FT 1115.000, SD 2.98 at aa 235-256, sequence FT PDTIELCRIAGMSESKLRQSFK" FT CDS 363302..363415 FT /transl_table=11 FT /locus_tag="CBO0309" FT /product="NADH dehydrogenase subunit 1 (partial)" FT /note="Similar to N-terminal regions of several NADH FT dehydrogenase subunit 1 SWALL:Q953M0 (EMBL:AF348079) (318 FT aa) fasta scores: E(): 2.1, 47.05 38d in 34 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYK2" FT /protein_id="CAL81861.1" FT /translation="MTSEKEPLKPLTAEFINATILKVRLVLHLYIAQTLSD" FT CDS 363446..364375 FT /transl_table=11 FT /gene="fhuD1" FT /locus_tag="CBO0310" FT /product="putative ferrichrome-binding protein" FT /note="Similar to Bacillus subtilis ferrichrome-binding FT protein precursor FhuD or bsu33320 SWALL:FHUD_BACSU FT (SWALL:P37580) (315 aa) fasta scores: E(): 6.9e-19, 32.39 FT id in 321 aa. Also similar to CBO0306 35.144 38dentity in FT 313 aa overlap" FT /db_xref="GOA:A5HYK3" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:A5HYK3" FT /protein_id="CAL81862.1" FT /translation="MKKLLSLFCAIFMTTVIFAGCSSSKNEKKEEATVRTITTVKGDIE FT VPANPKRVVANWYVGEVITLGLNLVGYNAWEQETMPFYDKLKATKKIKKWEPEEVMNLK FT PDLIITYDEADFDKFSKVAPVLVIPESKNSIDRIKFIGEATGRTTEAKEAVSKFEKKLD FT AVKKTFKSDKFVGKTFSIMEDWGPTGEFSGIYYETGSRGGTLVYDYLGLKYPDKLKELI FT EKSKKGRGSISYEVAHEYFGDYILWFQQEGKESKYSKTDIWKSIPAVAAGRVVEIPGKY FT SGLFYYSDITSLTEQLDYMSDAINSLVK" FT sig_peptide 363446..363530 FT /gene="fhuD1" FT /locus_tag="CBO0310" FT /note="probabilty 0.999, with cleavage site probability FT 0.382 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 363476..363508 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 363593..364288 FT /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic FT binding protein, score 74.8, E-value 1.9e-19" FT /inference="protein motif:Pfam:PF01497" FT CDS 364402..365430 FT /transl_table=11 FT /gene="fhuB1" FT /locus_tag="CBO0311" FT /product="ferrichrome transport system permease protein" FT /note="Similar to Bacillus subtilis ferrichrome transport FT system permease protein FhuB or bsu33310 SWALL:FHUB_BACSU FT (SWALL:P49936) (384 aa) fasta scores: E(): 2.1e-53, 46.52 FT id in 331 aa" FT /db_xref="GOA:A5HYK4" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5HYK4" FT /protein_id="CAL81863.1" FT /translation="MQKTYNKKRQLGALNFTIYMIVGVVLLVIMSAASISFGAADMNLT FT TAWGAIFNFDSSLTEHQIIQTLRLPRIAANIIVGSSLAICGAIMQGTTRNPLADSGLMG FT ISSGATFAMAFCMAFLPGGSYGQMMLFACIGAAITTGMTYFIASIGRGGMKPQRLVLAG FT ISISMLFGAFSQYLSIKYKLGHALAYWTAGGTAGAKWSELAIVFPFFIVGIIVAFVISP FT SITVLNLGDDAAIGLGLNTKKVKGVSTVVVLILTGISVIVVGPVGFVGLIVPHIVRYLI FT GVDYRYIIPASGLYGALITVTADLVGRLINKPYETPIGIIFALIGVPYFLYLTRIQRRE FT FE" FT sig_peptide 364402..364516 FT /gene="fhuB1" FT /locus_tag="CBO0311" FT /note="probabilty 1.000, with cleavage site probability FT 0.499 between residues 39 and 40" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(364438..364506,364600..364668,364702..364770, FT 364783..364851,364870..364938,365023..365091, FT 365152..365220,365263..365331,365350..365409) FT /note="9 probable transmembrane helices predicted for FT CBO0311 by TMHMM2.0 at aa 13-35, 67-89, 101-123, FT 128-150,157-179, 208-230, 251-273, 288-310 and 317-336" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 364513..365409 FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 372.8, E-value 3.7e-109" FT /inference="protein motif:Pfam:PF01032" FT CDS 365427..366440 FT /transl_table=11 FT /gene="fhuG1" FT /locus_tag="CBO0312" FT /product="ferrichrome transport system permease protein" FT /note="Similar to Bacillus subtilis ferrichrome transport FT system permease protein FhuG or bsu33300 SWALL:FHUG_BACSU FT (SWALL:P49937) (336 aa) fasta scores: E(): 3.4e-51, 41.39 FT id in 343 aa" FT /db_xref="GOA:A5HYK5" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5HYK5" FT /protein_id="CAL81864.1" FT /translation="MKKKGYSVSRGLTIILLLTIILLVVAVISVNSGKMNLSPSEVFNV FT LIGRGTDKQNLIVYNFRLPRIVLTMLVGIGMGTAGCVMQSLLRNDMASPGTLGISSGSG FT LFVLLFIVIFKVDSVSSAIALPLLAFVGGMTAAILIFLLSYRRGKSISPTGLILTGVAV FT GSGYSAVTMMLTLKLDEKQMDFVQRWSAGSLWGDNWTYISILAPWVLILFLYVFYKSRI FT LNTLNLGNQTAKGLGVAVKREFIGLTVAAVALSSGSVALGGNFFFVGMISPHMARKFVG FT SNHKLLIPTASLVGSIIILLSDTITRTISFGSDIPTGIVITVLSTPYFLYLLVKSN" FT sig_peptide 365427..365514 FT /gene="fhuG1" FT /locus_tag="CBO0312" FT /note="probabilty 1.000, with cleavage site probability FT 0.419 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(365445..365513,365619..365687,365706..365765, FT 365793..365861,365886..365954,366021..366080, FT 366171..366239,366282..366332,366351..366419) FT /note="9 probable transmembrane helices predicted for FT CBO0312 by TMHMM2.0 at aa 7-29, 65-87, 94-113, FT 123-145,154-176, 199-218, 249-271, 286-302 and 309-331" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 365523..366431 FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 320.4, E-value 2.3e-93" FT /inference="protein motif:Pfam:PF01032" FT CDS 366451..367281 FT /transl_table=11 FT /gene="fhuC1" FT /locus_tag="CBO0313" FT /product="ferrichrome ABC transporter, ATP-binding protein" FT /note="Similar to Bacillus subtilis ferrichrome transport FT ATP-binding protein FhuC or bsu33290 SWALL:FHUC_BACSU FT (SWALL:P49938) (269 aa) fasta scores: E(): 3.1e-60, 63.29 FT id in 267 aa" FT /db_xref="GOA:A5HYK6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HYK6" FT /protein_id="CAL81865.1" FT /translation="MKSIETKNLDIAYEDTLIVKELNMQIPKGKITSIIGANGCGKSTI FT LKSVGRILKPKKGVVHLSGQDISKLSTKEIAKKMAILPQNPTAPSGLTVSELVAYGRFP FT HQKGFGNLTEEDKRIVKWALAATKLSEFERREVDTLSGGQRQRVWIAMALAQQTDLILL FT DEPTTYLDLAHQLEILKLLYELNRNQKCTIVMVLHDLNLAARFSDYIIAIQKGDIIKYG FT PPEEVMTPEVLRKTFNINADIVIEPKSNRPVCITYDIIDENECVQLKEREAVGI" FT misc_feature 366535..367098 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 192.9, E-value 5.4e-55" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 366556..366579 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 366868..366912 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 367278..369002 FT /transl_table=11 FT /locus_tag="CBO0314" FT /product="putative ferrichrome ABC transporter,ATP-binding FT protein" FT /note="Similar to Clostridium perfringens probable ABC FT transporter cpe2296 SWALL:Q8XI28 (EMBL:AP003193) (566 aa) FT fasta scores: E(): 2.6e-72, 41.62 38d in 567 aa" FT /db_xref="GOA:A5HYK7" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:A5HYK7" FT /protein_id="CAL81866.1" FT /translation="MRTTLRIFIGARRYWIHLILALIAVIISTIAGFYNPWALRELTSI FT ATEGSANFGGQSLRIGLMLLVATILQSAGSAISGYLNHHAALHYVADMRTELYSKLQHM FT GLRYFNKSRTGDLTSRVINDVMEVEILLAHIIPDFVVNILTFIGVGILLFSINVKLAFI FT SLVTIPFIIMITLWQSKHLSPIWKQNSMIRGELSGTVQDNFSGIKEIQIFNQQEREEKR FT IKNLSIKHSKAYLKASFFFETTFPLLAFFTALGSVIVIIFGGFMVSRGEINIGDIVGFS FT MYLSMFYGPIKSFSRLMEMAGNAVAGCKRVFEVMDEVSDVQEKVNAKKLPRVKGEVEFK FT GISFSYNDEIKVLKNINLKVNPGETVAFVGATGVGKTTIASLLNRFYDPQSGSILMDGI FT DIKDVTLKSLRDNISMVLQDTFLFNGTIYENIVYGWKEATRNQVVAASKAANAHNFIEN FT LEDGYDTIIGERGVRLSGGQKQRISIARAILRNSPILILDEATSALDTRTEKEIQAALD FT EISKDRTTIVIAHRLSTIYNADKIVVLEGAGIKETGTHDELIRSGGTYAMLYKSQVS" FT sig_peptide 367278..367413 FT /locus_tag="CBO0314" FT /note="probabilty 0.734, with cleavage site probability FT 0.398 between residues 46 and 47" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(367320..367388,367449..367517,367668..367736, FT 367755..367808,368004..368072,368091..368150) FT /note="6 probable transmembrane helices predicted for FT CBO0314 by TMHMM2.0 at aa 15-37, 58-80, 131-153, FT 160-177,243-265 and 272-291" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 367329..368150 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 161.5, E-value FT 1.5e-45" FT /inference="protein motif:Pfam:PF00664" FT misc_feature 368364..368918 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 212.6, E-value 6e-61" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 368385..368408 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 368697..368741 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS complement(369057..369437) FT /transl_table=11 FT /locus_tag="CBO0315" FT /product="putative iron dependent repressor" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT transcriptional regulator MntR or b0817 or c0903 FT SWALL:MNTR_ECOLI (SWALL:P75787) (155 aa) fasta scores: E(): FT 3.6e-07, 30 38d in 120 aa" FT /db_xref="GOA:A5HYK8" FT /db_xref="InterPro:IPR001367" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR022687" FT /db_xref="InterPro:IPR022689" FT /db_xref="UniProtKB/TrEMBL:A5HYK8" FT /protein_id="CAL81867.1" FT /translation="MEKLTFVMENYLEAIYELSEESNGVKMTRIAEKLGVTKASTNSAM FT VTLAEKGLITNEKYKKIFLTPLGLKIARFTYKKHHIIKDFLIKTLNIDSSIADEDACAI FT EHVISSDSVYAMQKFLSEHENK" FT misc_feature complement(369075..369245) FT /note="Pfam match to entry PF02742 Fe_dep_repr_C, Iron FT dependent repressor, metal binding and dimerisation domain, FT score 32.6, E-value 3.5e-08" FT /inference="protein motif:Pfam:PF02742" FT misc_feature complement(369249..369431) FT /note="Pfam match to entry PF01325 Fe_dep_repress, Iron FT dependent repressor, N-terminal DNA binding domain, score FT 45.9, E-value 9.2e-11" FT /inference="protein motif:Pfam:PF01325" FT misc_binding 369858..369960 FT /gene="pbuX" FT /locus_tag="CBO0316" FT /bound_moiety="purine" FT /note="Purine riboswitch" FT CDS 370136..371437 FT /transl_table=11 FT /gene="pbuX" FT /locus_tag="CBO0316" FT /product="xanthine permease" FT /note="Similar to Bacillus subtilis xanthine permease PbuX FT or bsu22060 SWALL:PBUX_BACSU (SWALL:P42086) (438 aa) fasta FT scores: E(): 1e-52, 37.77 38d in 405 aa" FT /db_xref="GOA:A5HYK9" FT /db_xref="InterPro:IPR006042" FT /db_xref="InterPro:IPR006043" FT /db_xref="InterPro:IPR017588" FT /db_xref="UniProtKB/TrEMBL:A5HYK9" FT /protein_id="CAL81868.1" FT /translation="MKKNEMDIQLMYGVNDKPQILMQILLGLQHIFAAFGGIIVVPIVI FT SAALGFDAQTSTALISSAILAAGVATFIQSRGIGPIGARVACIMGTDFTFVAPAIAVGG FT KFGLSGIFGATILGAGIVIILSFFVKPLMKLFPPIVTGTVVSLIGLTLLPVSIDWAAGG FT AGSANYGSLKNISIALFIMIVTLLLNHYGKGLVSSASILIGMIVGYIICIPLEMVDFSS FT VSQASWVSLPKIFGYGITFNLQVLLPFIPAYFVTIIGTVGCLKAITEVSGIKADEKPIT FT AGVLSDGVGSMLAGVFGALPNTSFSQNIGLIPLTKVASRYVTMMAGILLVILGLFPKFA FT ALINIMPQPVLGGVGIVMFGTVAAAGIQTLSSVKLNNRNMLIIATSIGLGLGVTFRPEF FT IAQLPESLKMIFSSGISTGTIVALLLNVILKEKE" FT misc_feature 370196..371332 FT /note="Pfam match to entry PF00860 xan_ur_permease,Permease FT family, score 380.3, E-value 2.1e-111" FT /inference="protein motif:Pfam:PF00860" FT misc_feature order(370205..370273,370301..370354,370373..370441, FT 370451..370519,370538..370606,370634..370702, FT 370721..370789,370868..370936,370970..371038, FT 371096..371164,371183..371251,371363..371422) FT /note="12 probable transmembrane helices predicted for FT CBO0316 by TMHMM2.0 at aa 24-46, 56-73, 80-102, FT 106-128,135-157, 167-189, 196-218, 245-267, 279-301, FT 321-343,350-372 and 410-429" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 371171..371233 FT /note="PS01116 Xanthine/uracil permeases family signature." FT /inference="protein motif:ProSite:PS01116" FT CDS 371460..372032 FT /transl_table=11 FT /gene="xpt" FT /locus_tag="CBO0317" FT /product="xanthine phosphoribosyltransferase" FT /EC_number="2.4.2.-" FT /note="Similar to Bacillus subtilis xanthine FT phosphoribosyltransferase Xpt or bsu22070 SWALL:XPT_BACSU FT (SWALL:P42085) (194 aa) fasta scores: E(): 4.1e-32, 52.63 FT id in 190 aa" FT /db_xref="GOA:A5HYL0" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR010079" FT /db_xref="UniProtKB/Swiss-Prot:A5HYL0" FT /protein_id="CAL81869.1" FT /translation="MEKLQNRILQEGHALSETVLKVDSFLNHQVDPDLMYEIGTYFKNY FT FKEHKITKVFTIESSGIAPAVMTAMQMNLPMVILKKQASKILNGDVYQTTVHSFTKGLD FT YELTLSKKYIAKEDNILIIDDFLANGEAALGAARLVKEAGAKVAGMGIVIEKSFQPGRK FT MLEDKGYDVYSLARIAKLQKGLIEFVK" FT misc_feature 371523..371996 FT /note="Pfam match to entry PF00156 FT Pribosyltran,Phosphoribosyl transferase domain, score 75.6, FT E-value 1.1e-19" FT /inference="protein motif:Pfam:PF00156" FT CDS 372483..373175 FT /transl_table=11 FT /locus_tag="CBO0318" FT /product="two-component response regulator" FT /note="Similar to Bacillus cereus two-component response FT regulator bc4835 SWALL:Q816J5 (EMBL:AE017013) (231 aa) FT fasta scores: E(): 7.7e-51, 60.08 38d in 228 aa" FT /db_xref="GOA:A5HYL1" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:A5HYL1" FT /protein_id="CAL81870.1" FT /translation="MNYKIYIIEDDLSISLLLKDYITKYGFDVKIAENFENIIEDFNEF FT NPDVVLLDVNLPKYDGFYWCRRIRQKSKIPIIFISARDSGMDQVMALENGADDYIIKPF FT YCDVIMAKIKSHIRRAFGEYAPKVDEKIVELQGLKFYKERSEIEFKDERVIITKKEGIL FT LEYLMKKYPKVVNRDFLLEKIWDDIEFVEENTLNVNVSRIRKRLHKLGIEDGIETVRGV FT GYRLNKTW" FT misc_feature 372489..372845 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 81.7, E-value 1.6e-21" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 372933..373160 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 81.7, E-value 1.6e-21" FT /inference="protein motif:Pfam:PF00486" FT CDS 373188..374168 FT /transl_table=11 FT /locus_tag="CBO0319" FT /product="two-component sensor kinase" FT /note="Similar to Bacillus cereus two component system FT histidine kinase bc4836 SWALL:Q816J4 (EMBL:AE017013) (340 FT aa) fasta scores: E(): 4.2e-48, 41.53 38d in 325 aa" FT /db_xref="GOA:A5HYL2" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="UniProtKB/TrEMBL:A5HYL2" FT /protein_id="CAL81871.1" FT /translation="MKLFIKDNKGYIVVYFISIFITLGYLALSGFVQIGEYLYIVLFNT FT FILGCFLFFRYYKNKEVYRFLDEGLNNLDESFLDLGNSVLGESISNILKKEHNLYEAEI FT IKHNKVYNDHLTFINQWVHQMKTPLSVIQLQMQEYEGEEPFDSMKVEISKLNRGLNMAM FT YFARLDSFQKDFIVEKFSLYNLVMSKVNEEKQIFIKNRILPKVEIDDSIEVYSDVKWMK FT FVLEQLIVNGVKYSKDKGKELIIRAYDEENAVKLSVIDKGVGIPKKDIKRVFDPFFTGE FT NGRNFGESTGMGLYIVKRICDSLEHNVFIESKVSEGTTVSIIFEK" FT misc_feature order(373221..373289,373299..373358) FT /note="2 probable transmembrane helices predicted for FT CBO0319 by TMHMM2.0 at aa 12-34 and 38-57" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 373524..373700 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 23.0, E-value 0.00039" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 373833..374165 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 96.2,E-value 6.6e-26" FT /inference="protein motif:Pfam:PF02518" FT CDS 374344..375201 FT /transl_table=11 FT /gene="upk1" FT /locus_tag="CBO0320" FT /product="putative undecaprenol kinase" FT /EC_number="2.7.1.66" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 putative undecaprenol kinase Upk or BacA or b3057 FT or z4410 or ecs3940 SWALL:UPK_ECOLI (SWALL:P31054) (273 aa) FT fasta scores: E(): 4.5e-36, 42.18 38d in 275 aa" FT /note="also similar to CBO0414 (51.056 38d)" FT /db_xref="GOA:A5HYL3" FT /db_xref="InterPro:IPR003824" FT /db_xref="UniProtKB/TrEMBL:A5HYL3" FT /protein_id="CAL81872.1" FT /translation="MGIDIMFILKAIIIAVVEGLTEFIPVSSTGHMILVGSAINFNGDF FT AKMFEVVIQLGAILAVVVRYWEKIKESIVEFFKFIFTKGKEGKTGFKFGVNVIVGSIPI FT GITGLLFYHKIKSLFRPEAVIIGFIVGGILLLIIENMFRKKEHAVQDIDSITFAQALKV FT GVLQILSVWPGMSRSASTIMGGWIAGISTPIAAEFSFFLAIPAMIGTSLKDLFEFDYSI FT MTPTLWSALILGFVVAFIVSIIVMNKFVSYLKKKPMKVFAIYRVLAGLLLAALVFTKII FT VLTV" FT misc_feature 374371..375159 FT /note="Pfam match to entry PF02673 BacA, Bacitracin FT resistance protein BacA, score 332.8, E-value 4.1e-97" FT /inference="protein motif:Pfam:PF02673" FT misc_feature order(374377..374445,374488..374541,374614..374682, FT 374710..374769,374896..374964,375022..375090, FT 375124..375192) FT /note="7 probable transmembrane helices predicted for FT CBO0320 by TMHMM2.0 at aa 12-34, 49-66, 91-113, FT 123-142,185-207, 227-249 and 261-283" FT /inference="protein motif:TMHMM:2.0" FT CDS 375216..375962 FT /transl_table=11 FT /locus_tag="CBO0321" FT /product="ABC transporter, ATP-binding protein" FT /note="Similar to Bacillus cereus ABC transporter FT ATP-binding protein bc4839 SWALL:Q816J1 (EMBL:AE017013) FT (250 aa) fasta scores: E(): 7.3e-58, 68.16 38d in 245 aa" FT /db_xref="GOA:A5HYL4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5HYL4" FT /protein_id="CAL81873.1" FT /translation="MEILKVSNLKKVYGKKIIFTALNNISFNIDEGEFVGIMGPSGSGK FT TTLLNMISTVDKPTSGQITIKDKNPLTLKGEDLALFRRRELGFVFQDFNLLDTLTIGEN FT IVLPLTLDGISIKEQDEKLNIVSKILGIENLLEKRTFEVSGGQSQRTAIARALIHDPSL FT LLADEPTGNLDSKASKTVMELFEKINKEEKVTTMMVTHDPLAASYCNRILFIKDGVIYN FT EIYKGESRQQFYQEIIDLLALLGGAN" FT misc_feature 375309..375869 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 199.7, E-value 4.9e-57" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 375330..375353 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 375962..377824 FT /transl_table=11 FT /locus_tag="CBO0322" FT /product="ABC transporter, permease protein" FT /note="Similar to Bacillus cereus ABC transporter permease FT protein bc1995 SWALL:Q81EI1 (EMBL:AE017004) (626 aa) fasta FT scores: E(): 2e-63, 34.07 38d in 628 aa" FT /db_xref="GOA:A5HYL5" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5HYL5" FT /protein_id="CAL81874.1" FT /translation="MNFREFSTKNVVRNIRAYFAYLLSSTISAALLFSFTMLVLHPNLD FT VTTFPIYLQKAFNITTIIAYLFLCLFIFYSVSVFIKSRFKEFGILYILGSSDKQIKKMI FT AIENVLISSLSGIFGVILGLVFSKIFLILSGRLLGYNALRFYLPVKAIIITFLAFVLMG FT ILISIFTTYMIKEDEVLNLLKGTQKPKSEPKTSNIIAILCVVLLLGGYYFSITSTMNNI FT AYRIIPVTVVVIIGTYLLFSQLSVFVIKILKKNREFYMNKTKVLWISTLLYRIKDNTRM FT FFLITITSAMAFTSIGAVSAFWINKEAEVDKNFPQAFFYASYKKDYNELDFIEGSLKKE FT GYNYTKIQGHIKSLVSKKNTIPINIINESTYNSIAESLGQEKIHIKSNEAIAGTPLMGN FT KRDNILVDNMDIKVITTLEERIIPALYDYVYIVKDDVYDKISGSTSSFYAFNVESYKDT FT LNICKNYEAKFGESNNKKDHIILMKANILESHKIGYGVIMFLTIFIGIIFFVTTGSFLY FT NKYYMDVQQDRMKYEQLNKIGITFKEIKKVSTIEIGVLFLFPYIVSVIHSLFALSALKN FT AFEMDVNLVAFFVMGSFFIIQIIYFFIIRWNYLLDIKKSLANRI" FT sig_peptide 375962..376133 FT /locus_tag="CBO0322" FT /note="probabilty 0.836, with cleavage site probability FT 0.425 between residues 58 and 59" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(376016..376084,376127..376195,376289..376357, FT 376415..376483,376544..376612,376640..376708, FT 376805..376873,377447..377515,377615..377683, FT 377711..377779) FT /note="10 probable transmembrane helices predicted for FT CBO0322 by TMHMM2.0 at aa 19-41, 56-78, 110-132, FT 152-174,195-217, 227-249, 282-304, 496-518, 552-574 and FT 584-606" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 376118..376498 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 44.6, E-value 2.3e-10" FT /inference="protein motif:Pfam:PF02687" FT CDS 377848..377994 FT /transl_table=11 FT /locus_tag="CBO0323" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYL6" FT /protein_id="CAL81875.1" FT /translation="MGNKEILYSLDENLRIQYNMRAFKDYIKLNEERQIVMDSIKKDGK FT VYS" FT CDS 378321..378677 FT /transl_table=11 FT /locus_tag="CBO0324" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved FT protein,putative murein hydrolase exporter ctc01825 FT SWALL:Q893J3 (EMBL:AE015942) (117 aa) fasta scores: E(): FT 1.9e-30,67.52 38d in 117 aa" FT /db_xref="GOA:A5HYL7" FT /db_xref="InterPro:IPR005538" FT /db_xref="UniProtKB/TrEMBL:A5HYL7" FT /protein_id="CAL81876.1" FT /translation="MRLLRQLGIILLICLLGEAIHDFFKLPIPGNVIGMILLFLCLSLG FT IIKLTKINYISKFLLDHLAFFFVPAGVGILSCMPMLKGKWLAFLGVCLITSIIIIVVTG FT WTIQLYIKLTSKEV" FT misc_feature 378327..378656 FT /note="Pfam match to entry PF03788 LrgA, LrgA family,score FT 92.4, E-value 9.4e-25" FT /inference="protein motif:Pfam:PF03788" FT misc_feature order(378339..378392,378402..378461,378495..378563, FT 378573..378641) FT /note="4 probable transmembrane helices predicted for FT CBO0324 by TMHMM2.0 at aa 7-24, 28-47, 59-81 and 85-107" FT /inference="protein motif:TMHMM:2.0" FT CDS 378680..379375 FT /transl_table=11 FT /locus_tag="CBO0325" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani murein hydrolase FT export regulator ctc01826 SWALL:Q893J2 (EMBL:AE015942) (229 FT aa) fasta scores: E(): 1.6e-59, 72.92 38d in 229 aa" FT /db_xref="InterPro:IPR007300" FT /db_xref="UniProtKB/TrEMBL:A5HYL8" FT /protein_id="CAL81877.1" FT /translation="MIQDILNSPVFGILLSIIGFEIGLYIYRKTKIALFNPLLICIALI FT VCILISFNIKLDNFNKGGNLISFFLGPATVALAVPLYKKINVIKKYAIPILLGVTVGCI FT TAMISIFYISKAFGLTSELSYSLMPKSITTPIGIEVSKVLGGIPAITVSAIIITGIMGA FT VIAPIVCKIFKIKNNIAIGISIGTSSHAIGTTKAIEMGETEGAMSSLAIGIAGLITSFL FT APIIIKFLH" FT misc_feature order(378692..378760,378773..378841,378869..378925, FT 378950..379018,379118..379186,379292..379360) FT /note="6 probable transmembrane helices predicted for FT CBO0325 by TMHMM2.0 at aa 5-27, 32-54, 64-82, FT 91-113,147-169 and 205-227" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 378695..379372 FT /note="Pfam match to entry PF04172 LrgB, LrgB-like FT family,score 317.4, E-value 1.8e-92" FT /inference="protein motif:Pfam:PF04172" FT CDS 379671..380321 FT /transl_table=11 FT /locus_tag="CBO0326" FT /product="putative lipoprotein" FT /note="Similar to Clostridium acetobutylicum predicted FT membrane protein, cf-20 family cac0208 SWALL:Q97MI8 FT (EMBL:AE007534) (213 aa) fasta scores: E(): 2.4e-19,35.04 FT 38d in 214 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYL9" FT /protein_id="CAL81878.1" FT /translation="MKKAKKSLILSLVLLFIPIMVMGCSSKPKVSADETAKILFDFYIK FT GDQESLSKIKISKDQIEEISKMQKDKTISTIKTNLATAGLKVNDEQIKQIYAARVSALK FT KLSAKAEVVSQDDKSAQVKLKATHIDEVALDEKAATDAVEEVKKMNLTDRQEALNKATD FT IYIKNLIKSYENVKPSSDMKEQTFKFIIKEKTWIAEDMKNFGEGIVKLTSGIK" FT sig_peptide 379671..379764 FT /locus_tag="CBO0326" FT /note="probabilty 1.000, with cleavage site probability FT 0.999 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature 379710..379742 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 380726..381133 FT /transl_table=11 FT /locus_tag="CBO0327" FT /product="radical SAM superfamily protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved protein cac3492 SWALL:Q97DI5 FT (EMBL:AE007846) (290 aa) fasta scores: E(): 2.2e-20,54.63 FT 38d in 108 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYM0" FT /protein_id="CAL81879.1" FT /translation="MEYITAKTLISNYSENNWWFGINYNMNIYKGCCHGCIYCDSRSEC FT YGIENFDKVRAKKNAIQIIKNELRKKRKKGVIGTGAMSDPYNHLERELMLTRMALEEIN FT TLNFGAAIATKSNLIVRDIDILKKLRLIHLH" FT misc_feature 380801..381130 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 22.8, E-value 4.5e-06" FT /inference="protein motif:Pfam:PF04055" FT CDS 381166..381618 FT /transl_table=11 FT /locus_tag="CBO0328" FT /product="conserved hypothetical protein" FT /note="Similar to the C-terminal region of Clostridium FT acetobutylicum uncharacterized conserved protein cac3492 FT SWALL:Q97DI5 (EMBL:AE007846) (290 aa) fasta scores: E(): FT 3.4e-15, 41.04 38d in 134 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYM1" FT /protein_id="CAL81880.1" FT /translation="MCKKVEPNVCVTSKRFQAIKELSYNGIFTGILLMPILPFINDNGE FT NIVKIVKKAHECGAKFIFAYGMGLTLRGNQREYFYRKLIREFPKENMVVKYKNAFGNKY FT ECASLNHKKLWSIFKNECEKLGILYKMEDIILAYKDNYGNNQLSWF" FT CDS 381753..383261 FT /transl_table=11 FT /locus_tag="CBO0329" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani ATP-dependent Zn FT protease ctc00401 SWALL:Q898P3 (EMBL:AE015937) (509 aa) FT fasta scores: E(): 1.3e-177, 88.84 38d in 502 aa" FT /db_xref="InterPro:IPR014999" FT /db_xref="UniProtKB/TrEMBL:A5HYM2" FT /protein_id="CAL81881.1" FT /translation="MRIGFDHEKYLEEQSKYILERVNNYDKLYLEFGGKLLFDLHAKRV FT LPGFDENAKIKLLHKLKEKVEIIICLYAGDIERNKIRGDFGITYDVDVLRLIDDLRGYD FT LEVNSVVITRYSGQPATNIFINKLERRGIKVYKHEATKGYPTDVDTIVSDEGYGKNPYI FT ETTKPIVVVTAPGPGSGKLATCLSQLYHEYKRGNVAGYSKFETFPVWNVPLKHPLNIAY FT ESATVDLKDVNMIDSFHFDAYNKVAVNYNRDIESFPVLKRIIEKITGEESVYKSPTDMG FT VNRVGFGIVDDEIVKEASKQEIIRRAFKTACEYKKGYVDKETFHRAKLIMEEMNLKEED FT RKVVIPAREYAAKLKERANKSETCTVVALELEDGTILTGRSSELMDGTAAVILNAVKHY FT ANISDEIHLISPVILEPIINLKAKTLGSKRTALSCEEVLIALSICAATNPTAQVAMGKL FT PMLKGCQAHSTTILSTNEEQTFRKLGIDVTCDPEYISESLYYNN" FT CDS 383585..384136 FT /transl_table=11 FT /locus_tag="CBO0330" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1563 SWALL:Q8XK40 (EMBL:AP003191) (188 aa) fasta FT scores: E(): 3.1e-37, 53.4 38d in 176 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYM3" FT /protein_id="CAL81882.1" FT /translation="MLETIILALIMAKLKGYEIKPLFKSWHIYPVVTIELIYIIIQINI FT FLENYSLIRYAKILEAIYICSYLFIIIKYEQYTSAIIGAIFILIGSMSNKIAIGVNNGR FT MPVFPTLSYFTGYAKPYSFVKVNDIHILGGSSTKFKFLTDIIDVGYSIMSIGDIFIRLF FT VFIVIFNTIKHINNIKYIKI" FT misc_feature order(383657..383725,383738..383797,383816..383884, FT 384032..384100) FT /note="4 probable transmembrane helices predicted for FT CBO0330 by TMHMM2.0 at aa 25-47, 52-71, 78-100 and 150-172" FT /inference="protein motif:TMHMM:2.0" FT CDS 384315..384782 FT /transl_table=11 FT /locus_tag="CBO0331" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta FT scores: E(): 1.6e-23, 40.52 38d in 153 aa" FT /note="Also similar to CBO0335 (34.4 38d) and CBO0337 (42.6 FT 38d)." FT /db_xref="UniProtKB/TrEMBL:A5HYM4" FT /protein_id="CAL81883.1" FT /translation="MLKLSIVEFVARATPEAFLLIFAVYTFSNTKMNKKNYLLSSFLML FT IMIFIIRSLPISYGIHTILSIMVLILLSYIINRIDVIRAVKSTIVTIILQLICEGTNIF FT IIQYILKKNMNHIFRDPNLKTIYGIPSLIIFACIIVLRYIRLLKRKELQYD" FT misc_feature order(384342..384401,384420..384473,384483..384542, FT 384576..384644,384687..384746) FT /note="5 probable transmembrane helices predicted for FT CBO0331 by TMHMM2.0 at aa 10-29, 36-53, 57-76, 88-110 and FT 125-144" FT /inference="protein motif:TMHMM:2.0" FT CDS 384775..385464 FT /transl_table=11 FT /locus_tag="CBO0332" FT /product="putative accessory gene regulator protein B" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1561 SWALL:Q8XK42 (EMBL:AP003191) (214 aa) fasta FT scores: E(): 1.3e-33, 44.39 38d in 214 aa" FT /db_xref="GOA:A5HYM5" FT /db_xref="InterPro:IPR006741" FT /db_xref="UniProtKB/TrEMBL:A5HYM5" FT /protein_id="CAL81884.1" FT /translation="MINTETISNNIAKKIASELNLDNDKKEVIAYGTFALFQTIFSIFL FT IIIFGYLFNVQIEALMISFTISILRKSSGGVHATSPNNCAIIGTIICVGFAIIVVFLTS FT SLINLNILLFLGVIIFVWSYYIIYKLAPVDSKAKPIQKSKRVKKLKKSSIITLSVYLVI FT ILINFILYYKMMNKKYIIYSLCVYSGIVWQTFTLTRYGHLVVKKLDDFLNYMVDIKKGD FT KSHEKIK" FT misc_feature order(384865..384933,385027..385095,385099..385158, FT 385231..385290,385309..385377) FT /note="5 probable transmembrane helices predicted for FT CBO0332 by TMHMM2.0 at aa 31-53, 85-107, 109-128, 153-172 FT and 179-201" FT /inference="protein motif:TMHMM:2.0" FT CDS 385448..385582 FT /transl_table=11 FT /locus_tag="CBO0332A" FT /product="putative autoinducer prepeptide" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYM6" FT /protein_id="CAL81885.1" FT /translation="MKKLNKKVLMLVATFTTLLASIVASSACYWCVYQPKEPKCLREE" FT CDS 385654..387357 FT /transl_table=11 FT /locus_tag="CBO0333" FT /product="putative signaling protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1560 SWALL:Q8XK43 (EMBL:AP003191) (563 aa) fasta FT scores: E(): 3.2e-129, 61.02 38d in 567 aa" FT /db_xref="GOA:A5HYM7" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5HYM7" FT /protein_id="CAL81886.1" FT /translation="MNDVGNNKRNQINNIVSVVKLCSLLFSAIAIFKCFFSGNNKALDY FT KNNMSAIHIISTTILIFSLIYCIWVFLTTNKFRGRYNKRIYFIENIVLILLFFVVVLGT FT GTYASQYKFLFLFMIIITTIQSGMKYGIIIACLASFIILIMDIVCAPNLVVNEYFEQDL FT ILAGVFILTAWPLGFYVKVENEHIEKLESLVNKDGLTDVYNHRFFHDALSKEVIECEEK FT NEALSMIFIDIDYFKHYNDLYGHQKGDQVLKTIGEILKNNTRKEDIVARYGGEEFAVLL FT PNTSEQDAINIAEKIRKKIEYTYFEGEENQPNGNLTVSMGISVYPYKAKSDMELIKSAD FT DALYRAKFFNKNRVEAYTSILDELKNDIDEEHIDLVTSIKTLISVINAKDRYTYGHVER FT VVLYSRLLADKLKLSEEDKKNFIYGAYMHDIGKINISREILNKKMPLAKEEWEILKQHP FT VNGVEIIKPVSSLQNISDLILHHHERYDGKGYPDKLKGDNIPFLARALTVVDSFDAMTS FT NRPYNRRKTYEEAIEELKRCSGTQFDSYIAEKFIEVIIENKDSFDDLSLL" FT misc_feature order(385687..385746,385804..385872,385909..385977, FT 386035..386103,386140..386193) FT /note="5 probable transmembrane helices predicted for FT CBO0333 by TMHMM2.0 at aa 12-31, 51-73, 86-108, 128-150 and FT 163-180" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 386221..386712 FT /note="Pfam match to entry PF00990 GGDEF, GGDEF FT domain,score 198.8, E-value 9e-57" FT /inference="protein motif:Pfam:PF00990" FT misc_feature 386830..387198 FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 102.2, E-value 1.1e-27" FT /inference="protein motif:Pfam:PF01966" FT CDS 387588..388097 FT /transl_table=11 FT /locus_tag="CBO0334" FT /product="GnaT-family acetyltransferase" FT /note="Similar to Bacillus anthracis acetyltransferase,GnaT FT family ba3530 SWALL:Q81YL2 (EMBL:AE017035) (179 aa) fasta FT scores: E(): 3e-05, 25.94 38d in 158 aa" FT /db_xref="GOA:A5HYM8" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HYM8" FT /protein_id="CAL81887.1" FT /translation="MEDNNVELRQEVFKSDAAIIANWLEDTEITQYLNEKQNVSKSIKD FT IMYRVNMPILTHLFNKNGSFFMVTTSEKEPVGFLRLVPKNNVTEMVIVIGDKDKWGKGL FT GTNAILEGLKHAFFQWRADEVVAKINFKNQRSRRVFRKIGFTEDKELAKEMQYSMSIKE FT FLELVA" FT misc_feature 387786..388025 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 45.1, FT E-value 1.6e-10" FT /inference="protein motif:Pfam:PF00583" FT CDS 388494..388946 FT /transl_table=11 FT /locus_tag="CBO0335" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta FT scores: E(): 6.5e-10, 28.77 38d in 139 aa" FT /note="Also similar to CBO0331 (34.4 38d) and CBO0337 (33.1 FT 38d)." FT /db_xref="UniProtKB/TrEMBL:A5HYM9" FT /protein_id="CAL81888.1" FT /translation="MFKLSILEFFLIAIPESFIFTIGIYFLSKRFFDKKRLIIMSLLSA FT VEIYWVRMLPIHFGVHIGINIIFLILLSVNIGKISIKDAISYNMVMMIILSTSEFIGIF FT VLYNVFKINMSLIKPRSLIKIIYFIPSFTLFVFSVFTMNKFINREE" FT misc_feature order(388506..388574,388635..388703,388746..388814, FT 388851..388919) FT /note="4 probable transmembrane helices predicted for FT CBO0335 by TMHMM2.0 at aa 5-27, 48-70, 85-107 and 120-142" FT /inference="protein motif:TMHMM:2.0" FT CDS 388973..390820 FT /transl_table=11 FT /locus_tag="CBO0336" FT /product="two-component sensor histidine kinase" FT /note="Similar to Clostridium acetobutylicum sensory FT transduction histidine kinase cac0903 SWALL:Q97KL4 FT (EMBL:AE007605) (683 aa) fasta scores: E(): 3e-47, 32.62 id FT in 610 aa" FT /db_xref="GOA:A5HYN0" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HYN0" FT /protein_id="CAL81889.1" FT /translation="MNLDKIEIRNWSHDKKIYNSMLIVKFIILLFCGGAIYLDYAEKNN FT KNISQNFYCNALNLVIIIICLVSVYFIWMFISIKAFKFERIKTIQVIENTISIVIFTFI FT IMMSGSYKSSYKFLFLVAIITATIQLGMKHGIITSLVSSIIILAIDLILAPKAPVNIYF FT ETDLILVGVFIMTAWPLGYYVNIQKEDLRQKEEEVNILANKLDQKEMQKRCMEQLLIKN FT ENCYNLLIRNSKDAILVHRYGKIIFANERLKQMLGYKKEYNFEDIDIKSLIPKDEYNTV FT KNKLENLYYGSENVVNFQHNVINNKEKTIQNTSTYVIYDGMPTIFSILHDVTSKIQVEK FT LEQDVKKNIELLNESREYNKLITEFLSNISHELKTPLNVIFTAVQLLDFYEKDVDYEKQ FT DKYLKLIKQNCYRLMKLINNLLDTTKLDSGYLRLNLVNYNIVSLIEEITLSVTSYAESK FT GINIIFDTEMEERVIAVDTDKIERIILNLLSNAIKFTNPGGNIFVNIKDSEENVYVHIK FT DTGVGIPSDKLESIFERFFQIDKTLKKNKEGTGIGLHLVKSFVEMHNGKVTINSELGKG FT TEFIIKLPAIVCEEQIKSKNVVYEANIERINMEFSDITQ" FT misc_feature order(389033..389095,389138..389206,389243..389302, FT 389375..389434,389471..389530) FT /note="5 probable transmembrane helices predicted for FT CBO0336 by TMHMM2.0 at aa 21-41, 56-78, 91-110, 135-154 and FT 167-186" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 390053..390259 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 65.9, E-value 9.2e-17" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 390395..390730 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 142.0, FT E-value 1.1e-39" FT /inference="protein motif:Pfam:PF02518" FT CDS 391046..391513 FT /transl_table=11 FT /locus_tag="CBO0337" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1562 SWALL:Q8XK41 (EMBL:AP003191) (169 aa) fasta FT scores: E(): 4.2e-18, 39.07 38d in 151 aa" FT /note="Also similar to CBO0331 (42. 38d) and CBO0335 (33.1 FT 38d)." FT /db_xref="UniProtKB/TrEMBL:A5HYN1" FT /protein_id="CAL81890.1" FT /translation="MLKSSVVELLMRLTPEAFLFIFIIQAFSNSKINKNKYVLSSILFS FT VIIYSIRLLPIHYGVHTILNIIAIILICTFINQVAPIKAITYSLILVSFLALSEALNLY FT FIYKIFGKNIENILKSPFKKCIYLMPSIIVLVIIVLLIFKIKDRRVKDVFD" FT misc_feature order(391082..391135,391154..391213,391223..391291, FT 391310..391378,391421..391474) FT /note="5 probable transmembrane helices predicted for FT CBO0337 by TMHMM2.0 at aa 13-30, 37-56, 60-82, 89-111 and FT 126-143" FT /inference="protein motif:TMHMM:2.0" FT CDS 391500..392129 FT /transl_table=11 FT /locus_tag="CBO0338" FT /product="putative accessory gene regulator protein B" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1561 SWALL:Q8XK42 (EMBL:AP003191) (214 aa) fasta FT scores: E(): 8.7e-24, 35.92 38d in 206 aa" FT /db_xref="GOA:A5HYN2" FT /db_xref="InterPro:IPR006741" FT /db_xref="UniProtKB/TrEMBL:A5HYN2" FT /protein_id="CAL81891.1" FT /translation="MFLIERLSNKIGNKIANNLELDKDTEEIIAYGAFSVLQTIWALLC FT VVILGAMCNVLVESVIIALTAAAYRKYSGGIHANTPNKCAFLGAIIFVGFAFIVKNINI FT SVNLFFVLIGILTFIYSYYAIYKFVPVDTKAKPIENEDEILKLRRYSFFIISILFFIEA FT LLLLFYFKYKNEMLIYYGKCIIAGVLWQSFTLTPLAKRVFANIAME" FT misc_feature order(391617..391685,391728..391796,391809..391877, FT 391950..392009,392028..392096) FT /note="5 probable transmembrane helices predicted for FT CBO0338 by TMHMM2.0 at aa 40-62, 77-99, 104-126, 151-170 FT and 177-199" FT /inference="protein motif:TMHMM:2.0" FT CDS 392204..392338 FT /transl_table=11 FT /locus_tag="CBO0339" FT /product="putative autoinducer prepeptide" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYN3" FT /protein_id="CAL81892.1" FT /translation="MKKQLKEKCTKVTAKLLKSVAYSTADSACHLGIYQPKEPKSLRK" FT CDS 392421..394274 FT /transl_table=11 FT /locus_tag="CBO0340" FT /product="two-component sensor kinase" FT /note="Similar to Clostridium acetobutylicum sensory FT transduction histidine kinase cac0903 SWALL:Q97KL4 FT (EMBL:AE007605) (683 aa) fasta scores: E(): 1.1e-45,34.81 FT 38d in 586 aa" FT /db_xref="GOA:A5HYN4" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HYN4" FT /protein_id="CAL81893.1" FT /translation="MSEINKSREKNIYSITCTVKLASLLFSSIILYNYVSQNNCASKNS FT YYNVLLPMILSLITSLIYLIWSFFTVKTRMFKNILFIQRIENIFFILIFTILIIMSGKY FT NSHYKYLFLFIIITTTIQRGLKSGMIISIISSVIILTIDLSMANYNCINTYFENDLILS FT GVFILTAVSLGYYVKLGNESIKEKNIQLEDLNKKLNEKDSQRKYIEELLFKNDTCYNLL FT IENARDAIIIHRKDKIVFANESAAELLICSNNNELQNLNINSFILKEEQKKIRNKLELV FT YRNKRDIVCVEQVIQNNKRKKINVESISTYIIYNNKPAILSILRDITSQKQVEKLQKDV FT EKNIELLNESREYNKLITDFLANISHELKTPLNVIFTAVQILDLYKKDAESYDKKEQYI FT KVIKQNCYRLMRLINNLLDTTKLDSGYLKLNLVNCNIVNLVEEITLSVVYYAESKNINI FT IFDTDVEEKIMAVDPDKIERIVLNLLSNAIKFTGSGGNIYVTVKDFEDNIIISVKDTGI FT GIPRDKIENIFDRFVQVDKTLRRNKEGSGIGLYLVKSFVNMHEGTIDIQSEIGKGSEFI FT INIPVKLVKEDLEKENNVFYSPSKEYVDMEFADIYSEVSSK" FT misc_feature order(392454..392522,392565..392633,392658..392726, FT 392802..392861,392898..392951) FT /note="5 probable transmembrane helices predicted for FT CBO0340 by TMHMM2.0 at aa 19-41, 56-78, 87-109, 135-154 and FT 167-184" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 393486..393695 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 66.8, E-value 4.7e-17" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 393831..394166 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 150.8, FT E-value 2.4e-42" FT /inference="protein motif:Pfam:PF02518" FT CDS 394506..395372 FT /transl_table=11 FT /locus_tag="CBO0341" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1494 SWALL:Q8XKA6 (EMBL:AP003190) (277 aa) fasta FT scores: E(): 1.7e-64, 73.63 38d in 220 aa" FT /db_xref="GOA:A5HYN5" FT /db_xref="InterPro:IPR011063" FT /db_xref="InterPro:IPR012089" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:A5HYN5" FT /protein_id="CAL81894.1" FT /translation="MSGIAGKGCEVLVPFNERIPLKDIERSIVKKYRKHIWSKFVKAIK FT EYNLVEDGDKIAVAVSGGKDSILMAKLFQELKKHGQINFEIEFISMDPGYHEDIRKLLI FT DNCDYLNIPINLFDSDIFKVIDDIAKDYPCYMCARMRRGALYSKAQELGCNKLALGHHF FT NDVIETILLNVLYAGNFKTMLPKFRSTNFEGLELIRPLYYIEEEYIQKFIQNSGIWPLN FT CACMVAAGKIGNKRHEIKDLIKELKKNFKDVDKSIFMSSKNVNMEAILGWEKNKEKYSY FT LDFYDED" FT misc_feature 394668..395309 FT /note="Pfam match to entry PF01171 ATP_bind3, PP-loop FT family, score 37.3, E-value 2.8e-11" FT /inference="protein motif:Pfam:PF01171" FT CDS complement(395496..396041) FT /transl_table=11 FT /locus_tag="CBO0342" FT /product="transcriptional regulator" FT /note="Similar to Fusobacterium nucleatum transcriptional FT regulator, MerR family fn1928 SWALL:Q8RHS0 (EMBL:AE010495) FT (184 aa) fasta scores: E(): 2.5e-14, 36.06 38d in 183 aa" FT /db_xref="GOA:A5HYN6" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR013096" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:A5HYN6" FT /protein_id="CAL81895.1" FT /translation="MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLA FT ITSLKKIADALNVPITYFFKSPELHKFLVKKQEREVFELEGSSSKFIRLSGNFTERAME FT SILVVIPAEKQHGHKFSHPGEEFIYVLEGAIIANIDGEDYFVNEGDSIHFPSTIPHILS FT NPLKTDSKILTVVCPAIF" FT misc_feature complement(395853..396017) FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 63.7, E-value 4.1e-16" FT /inference="protein motif:Pfam:PF01381" FT misc_feature complement(395925..395990) FT /note="Predicted helix-turn-helix motif with score FT 1816.000, SD 5.37 at aa 47-68, sequence FT LTLKDLSEKTGLSISFLSQVEN" FT CDS 396396..397802 FT /transl_table=11 FT /locus_tag="CBO0343" FT /product="putative amino acid permease" FT /note="Similar to Clostridium perfringens membrane-spanning FT transporter protein cpe0166 SWALL:Q8XP02 (EMBL:AP003185) FT (495 aa) fasta scores: E(): 1.3e-43,30.62 38d in 480 aa" FT /db_xref="GOA:A5HYN7" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:A5HYN7" FT /protein_id="CAL81896.1" FT /translation="MKKKIGLWDLVFMNVSALFGIRWIAKSTASSFGLGLGAIPAWVLF FT AFIFFLPSALICAELAATYPRDGGLYEWVKEAYGEKWGFMVSWLNWTAKLFWYSSFLTF FT LIVNVSYTLGKPELAGNKMFVLICSLVIFWILSLISTKGMAFAKIFTNVGALGSTVPAI FT LLIVMAFVSVLVFGHKPASTYTVATLTPKLNMDTLAAISSVMFGLAGAETAANFVTEID FT DAKKTFPKAILISAAIVGGLYVLGSIAITMILPVDKITASEGILAALGTVAANLGIGPW FT FIRIIALGISLSVFGAIILYIASPIKMLFGSVKKGIFTEKFTKVNEHNIPVQAVILQAV FT IVSIILLTTTLLPSVDAIYNVLVTMTALTSLFPYVLLFRSYIKLRQDRPNEVRPYEMSK FT NNRKAIFIANMVLIISVIGIVLSAAPVMPTLAENIVYELEMIGGAILVIGIGLWKWNNF FT AKKTGFREEK" FT sig_peptide 396396..396576 FT /locus_tag="CBO0343" FT /note="probabilty 0.789, with cleavage site probability FT 0.637 between residues 61 and 62" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(396408..396467,396495..396563,396678..396734, FT 396762..396815,396852..396920,396984..397052, FT 397089..397157,397236..397304,397383..397451, FT 397461..397529,397608..397667,397695..397763) FT /note="12 probable transmembrane helices predicted for FT CBO0343 by TMHMM2.0 at aa 5-24, 34-56, 95-113, FT 123-140,153-175, 197-219, 232-254, 281-303, 330-352, FT 356-378,405-424 and 434-456" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 396420..397799 FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 32.1, E-value 6.9e-09" FT /inference="protein motif:Pfam:PF00324" FT CDS 397921..399003 FT /transl_table=11 FT /locus_tag="CBO0344" FT /product="probable metallopeptidase" FT /note="Similar to Clostridium perfringens probable proline FT dipeptidase cpe2497 SWALL:Q8XHI6 (EMBL:AP003194) (358 aa) FT fasta scores: E(): 1.7e-79, 56.11 38d in 360 aa" FT /db_xref="GOA:A5HYN8" FT /db_xref="InterPro:IPR000587" FT /db_xref="InterPro:IPR000994" FT /db_xref="UniProtKB/TrEMBL:A5HYN8" FT /protein_id="CAL81897.1" FT /translation="MNQERLNKVLEGMKEREIPQMLISDAPAIFYLTGKWIHTGERLIA FT LYLNENGNHKLFINELFPVTEDLGVEKVWFNDNQDGVEIISKYVEKDKVMGVDKNWPAR FT FLLRLMELQGGSKFVNGSIIIDRARMFKDEKEKELMRASSKANDAAMEKLYNLFKENQD FT LSEKEVGERLAKIYSDLGAERFSFDPIVGYGANAADPHHENDGSKLKEGDCIVLDIGCV FT KDSYCSDMTRVFFYKSVPEHSKKVYDTVVAANMAGIAAVKPGVRFCDIDKASRDVIEKA FT GYGKYFTHRTGHSIGIEDHDLGDVSAVNTEEIKPGMIFSIEPGIYLPGEVGVRIEDLVL FT VTEDGCEVLNKYSKELTIIE" FT misc_feature 398311..398991 FT /note="Pfam match to entry PF00557 FT Peptidase_M24,metallopeptidase family M24, score 160.6, FT E-value 2.8e-45" FT /inference="protein motif:Pfam:PF00557" FT CDS 399431..402019 FT /transl_table=11 FT /gene="adhE" FT /gene_synonym="aad" FT /locus_tag="CBO0345" FT /product="aldehyde-alcohol dehydrogenase [includes: alcohol FT dehydrogenase; acetaldehyde dehydrogenase [acetylating] (EC FT 1.2.1.10) (acdh); pyruvate-formate-lyase deactivase (pfl FT deactivase)]" FT /EC_number="1.2.1.10" FT /EC_number="1.1.1.1" FT /note="Similar to Clostridium acetobutylicum FT aldehyde-alcohol dehydrogenase [includes: alcohol FT dehydrogenase; acetaldehyde dehydrogenase [acetylating] (EC FT 1.2.1.10) (acdh); pyruvate-formate-lyase deactivase (pfl FT deactivase)] AdhE or Aad or cap0162 SWALL:ADHE_CLOAB FT (SWALL:P33744) (862 aa) fasta scores: E(): 2.6e-212,65.04 FT 38d in 861 aa, and to Escherichia coli, and Escherichia FT coli O157:H7 aldehyde-alcohol dehydrogenase [includes: FT alcohol dehydrogenase; acetaldehyde dehydrogenase FT [acetylating] (EC 1.2.1.10) (acdh); pyruvate-formate-lyase FT deactivase (pfl deactivase)] AdhE or Ana or b1241 or z2016 FT or ecs1741 SWALL:ADHE_ECOLI (SWALL:P17547) (890 aa) fasta FT scores: E(): 1.3e-201,62.44 38d in 860 aa" FT /db_xref="GOA:A5HYN9" FT /db_xref="InterPro:IPR001670" FT /db_xref="InterPro:IPR012079" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR016163" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:A5HYN9" FT /protein_id="CAL81898.1" FT /translation="MKITTTEELIRKIEKIKEAQKIYSTYSQDKVDKIFKAAAIAANKE FT RIKLAKMAVEETGMGIVEDKVIKNHFASEYIYNKYKDEKTCGVIEKDEAFGLTKIAEPI FT GVIAAIVPTTNPTSTAIFKALIALKTRNGIIFSPHPRAKKSTIMAAKIVLDAAVQAGAP FT KEIIGWIDEPTLELSNAVMSNSNLVLATGGPGMVKAAYSSGKPAIGVGPGNVPAIIHET FT ADIKMAVSSVVLSKTFDNGMICASEQSVIVMNSIYEEVKKEFVIRGAYVLNKEEIEKVK FT KIILVNGNVNAKIVGQTPQKIGEMAGIQVPDWAKLLVGEVQSVELEEPFSHEKLSPVLA FT MYKVKTYEEALTKAERLVELGGFGHTSSLYINTVKCKEEVEKFSNNMKTGRTIINMPSA FT QGGIGDIYNFKLAPSLTLGCGSWGGNSVSENVGPKHLLNIKNVAERRENMLWFRVPEKV FT YFKYGCLPIALKELKRMNKKKAFIVTDKVLYELGVAKKATDVLDEIGINYKVFFDVAPD FT PTLETAKKGAKEMVDFNPDTIIAIGGGSAMDAAKIMWVMYEHPEVEFEDLAMRFMDIRK FT RVYEFPHMGDKAMMISVATSAGTGSEVTPFAVITDEKTGVKYPLADYELTPDMAIVDAD FT LMLNMPKGLTAASGIDALTHAVEAYVSVMASEYTDGLCLEAIKTIFEYLPKAYKEGAQD FT IEAREKMAHASTIAGMAFANAFLGVCHSMAHKLGSMHHVPHGIANALLINETIKFNSED FT MPRKQTAFPQYKYPNAKAKYANIADYLSLGGKTPEEKVELLIKAIDKLKAEVNIPTSIE FT EAGVSKDKFFKTLDEMSEQAFDDQCTGANPRYPLISEIKEMYTNVFSTKK" FT misc_feature 400793..401980 FT /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing FT alcohol dehydrogenase, score 697.2, E-value 8.1e-207" FT /inference="protein motif:Pfam:PF00465" FT misc_feature 401318..401404 FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1." FT /inference="protein motif:ProSite:PS00913" FT misc_feature 401582..401644 FT /note="PS00060 Iron-containing alcohol dehydrogenases FT signature 2." FT /inference="protein motif:ProSite:PS00060" FT CDS 402338..402625 FT /transl_table=11 FT /locus_tag="CBO0346" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum predicted FT diverged chey-domain cac1602 SWALL:Q97IN8 (EMBL:AE007670) FT (103 aa) fasta scores: E(): 6.3e-16, 47.87 38d in 94 aa" FT /db_xref="InterPro:IPR016772" FT /db_xref="UniProtKB/TrEMBL:A5HYP0" FT /protein_id="CAL81899.1" FT /translation="MSVFVVGGDRIQTIKENLKEMGFNKISHVTGRRTRHRKIQVPTNT FT DLVLILTDYVGHTVVESIKEQSKSQNTRIVYSRRAWTSIEKTLKNTIGEN" FT CDS 402688..403278 FT /transl_table=11 FT /locus_tag="CBO0347" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00782 SWALL:Q897F6 (EMBL:AE015938) (202 aa) fasta FT scores: E(): 1.9e-28, 41.45 38d in 193 aa" FT /db_xref="InterPro:IPR024523" FT /db_xref="UniProtKB/TrEMBL:A5HYP1" FT /protein_id="CAL81900.1" FT /translation="MSRNLVTKYMNVINAMENKKYLYSLLLYLIAPTLDGVKPSTIVTL FT STSGKNLDLLWSKYKKEFLDIYKINYIELKKTDKCTTILYYHKEALNKVLYNKYNLEFL FT KEIGYRDFSNEESFLFKLKSRFKDTCPHEIGIFLGIPIEEVKSFIEDPKRECIYCGYWK FT VYNNIQKAKKQFTTYDISRTNMILEVLEKELNV" FT misc_feature 402748..402816 FT /note="1 probable transmembrane helix predicted for CBO0347 FT by TMHMM2.0 at aa 21-43" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(403564..404031) FT /transl_table=11 FT /locus_tag="CBO0348" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein Cac0449 SWALL:Q97LV5 (EMBL:AE007559) (156 aa) fasta FT scores: E(): 1.5e-29, 56.66 38d in 150 aa" FT /db_xref="InterPro:IPR021525" FT /db_xref="UniProtKB/TrEMBL:A5HYP2" FT /protein_id="CAL81901.1" FT /translation="MVIYHDVGGAHSSCVAANIHVKNLPSNTVPSKEDLLKLPTFDKLT FT KKDVGHLKFIGIDEFGHKVYTISVRYKPNIVIPALRDMYTELNGSGNDLILVSSQPFVN FT TWMKIGGFTSRGLGIVPIGRPIVTYGTLKSYMGLVDLVEKVKKKIQLDVPM" FT CDS complement(404386..405396) FT /transl_table=11 FT /locus_tag="CBO0349" FT /product="putative carbohydrate-binding protein" FT /note="Similar to Aspergillus oryzae fucose-specific lectin FT FleA SWALL:Q8TGE0 (EMBL:AB072379) (310 aa) fasta scores: FT E(): 0.00038, 23.27 38d in 275 aa, and to Clostridium FT tetani putative sialidase ctc00453 SWALL:Q898J4 FT (EMBL:AE015937) (292 aa) fasta scores: E(): 1.4e-89, 71.95 FT 38d in 271 aa" FT /db_xref="InterPro:IPR007132" FT /db_xref="UniProtKB/TrEMBL:A5HYP3" FT /protein_id="CAL81902.1" FT /translation="MYPFFDNPNYTNTYATNEDFVCPYFLDYYNNSQNNYKNFRGENYD FT FEDTEENIENRNIEKTEYEGLFRAWNPWTNLGGDITSGLGASSWAANRIDLFARGRGGE FT LIHNWFDNGKWNYWENLGGILTSSPKAVSWGFNRIDVVCRGTDNAMYHKWWDGSTWSGF FT ENLGGQLTSAPTICSWASNRLDCFARGTDNQLHHKWWDGSSWSQWEALGGSLTSGPGAV FT SWGPNRIDVFARGRNNTLIHKWWNGTSWSQWEDLGGFLTSAPCASSRGQNRIDVFARGR FT NNRLMYKYWDGSRWSDWTFLQGYLTSEPVSVSRNSSSINVFAKGPRENVIERIYS" FT CDS 405500..406027 FT /transl_table=11 FT /locus_tag="CBO0350" FT /product="putative phosphatase" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1026 SWALL:Q8XLL5 (EMBL:AP003189) (185 aa) fasta FT scores: E(): 3.9e-34, 54.7 38d in 170 aa" FT /db_xref="GOA:A5HYP4" FT /db_xref="InterPro:IPR000326" FT /db_xref="InterPro:IPR016118" FT /db_xref="UniProtKB/TrEMBL:A5HYP4" FT /protein_id="CAL81903.1" FT /translation="MNFIQNMDIYLLDFIHKSIANDFLDKIMIFITSIGNLGLIWIAIS FT VLLLISKKYRRVGMLCIATLILSSLIGEVVLKNLVQRGRPFTAIEGINLLVKAPKSFSF FT PSGHTASSFAVATVIGRKIKSFKLPIYILAFAIAFSRLYLYVHYPSDVLVGALIGIISA FT NIILYIYNKQNF" FT misc_feature order(405581..405649,405668..405727,405881..405934, FT 405953..406009) FT /note="4 probable transmembrane helices predicted for FT CBO0350 by TMHMM2.0 at aa 28-50, 57-76, 128-145 and FT 152-170" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 405623..406024 FT /note="Pfam match to entry PF01569 PAP2, PAP2 FT superfamily,score 102.2, E-value 1.1e-27" FT /inference="protein motif:Pfam:PF01569" FT repeat_region 406051..406080 FT /rpt_family="CB.17" FT /rpt_type=INVERTED FT /rpt_unit_seq="gaggatgtctcaaaatagccttaattttaa" FT /inference="ab initio prediction:REPuter" FT repeat_region 406092..406122 FT /rpt_family="CB.140" FT /rpt_type=DIRECT FT /rpt_unit_seq="ttaaaattaaggctatttttattttgagaca" FT /inference="ab initio prediction:REPuter" FT CDS 406438..407250 FT /transl_table=11 FT /locus_tag="CBO0351" FT /product="probable polysaccharide deacetylase" FT /note="Similar to Clostridium acetobutylicum predicted FT xylanase/chitin deacetylase cac2396 SWALL:Q97GH1 FT (EMBL:AE007739) (280 aa) fasta scores: E(): 3.1e-34, 45.6 FT id in 250 aa" FT /db_xref="GOA:A5HYP5" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:A5HYP5" FT /protein_id="CAL81904.1" FT /translation="MEKKNKILLTTICILLFVVGFFVTKNIIDKNNEKQVMKKEMINDN FT SKMVIRQMDDKIVFSEYIKDKYDAKQVFEKDGKKIAFLTFDDGPSHLTNDILDILKEYR FT IKATFFVVGNLAKENKNIIERQIREGHSIGNHTYTHDYKNIYSSVDVFVNEVDKTQNVI FT KSIVGSNYDIKLVRFPGGSFGDRLNPYKEAIKKKGYYNMDWNALNGDAEGNNIPKEKLI FT QNIKNTIEGKNHVVVLMHDCGAKKTTVEALPDIIEHLISQGYEFKALK" FT sig_peptide 406438..406525 FT /locus_tag="CBO0351" FT /note="probabilty 0.968, with cleavage site probability FT 0.480 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature 406657..407043 FT /note="Pfam match to entry PF01522 FT Polysacc_deacet,Polysaccharide deacetylase, score 137.1, FT E-value 3.3e-38" FT /inference="protein motif:Pfam:PF01522" FT CDS 407358..408044 FT /transl_table=11 FT /locus_tag="CBO0352" FT /product="two-component response regulator" FT /note="Similar to Bacillus subtilis alkaline phosphatase FT synthesis transcriptional regulatory protein PhoP or FT bsu29110 SWALL:PHOP_BACSU (SWALL:P13792) (240 aa) fasta FT scores: E(): 1.6e-34, 46.72 38d in 229 aa" FT /db_xref="GOA:A5HYP6" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYP6" FT /protein_id="CAL81905.1" FT /translation="MDKILIVEDESSIRGFVKVNLKMNNFDVIEAETGEEGIEKARKHK FT PDVVVLDIMLPGVDGLEVCKTLRQEFPNMGIIMLTAKSQDTDKVSGLEYGADDYIIKPF FT NPLELTLRIKAILRRVNAVKESDDNIITGGPFKIDLYSKKIYKNEEEIDITPTEYLLMK FT IFIENPGKAFNRDELLDLVWGYDFMGDSKIVDVNIRRLRSKIEETPSEPKFIKTVWGTG FT YRWQNT" FT misc_feature 407361..407720 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 151.7, E-value 1.3e-42" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 407802..408032 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 90.6, E-value 3.3e-24" FT /inference="protein motif:Pfam:PF00486" FT CDS 408054..409448 FT /transl_table=11 FT /locus_tag="CBO0353" FT /product="two-component sensor kinase" FT /note="Similar to Clostridium tetani alkaline phosphatase FT synthesis sensor protein phor or ctc01951 SWALL:Q892Y2 FT (EMBL:AE015942) (471 aa) fasta scores: E(): 9.7e-94,56.86 FT 38d in 459 aa" FT /db_xref="GOA:A5HYP7" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HYP7" FT /protein_id="CAL81906.1" FT /translation="MSKISVKRRLMVNFILIIIISVFILEFLLILFTRHYYYNNLEDAI FT SNQIKTSAEFYNKYFSNSPLEDNVLDNVDVFWRQTSAQVQIIDTKGKVLMDSIGVSNKS FT QIKTSDIQKALKGEKGVWIGKIDYDTSGVMAVTYPLKSDNQIVGVLRFITSLRYVNSDI FT ARISLGFLLIGLVVILISGLVSLFLANSITEPIKELTYVANKMASGNFKIKSEKMFDDE FT FGELSDTLNYMADEIVKKDQLKNEFISSVSHELRTPLTSIKGWAITLNSNEVDKEILKD FT GLKIIEDESERLSGMVEELLDFSKFVSGKMKLNKEEISICEIIDTVRKQLEPYAYRNRI FT NFKATCINKLPNIYGDRNRIKQVLINLLDNAFKFTPEGGLVELNTKYEEEYITIVVKDT FT GVGISKEDLPRVKEKFYKGNSGKSKNGIGLSICDEIIKLHNGVLHIESEENKGTTISIK FT LPMIKL" FT misc_feature order(408081..408149,408552..408620) FT /note="2 probable transmembrane helices predicted for FT CBO0353 by TMHMM2.0 at aa 10-32 and 167-189" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 408561..408770 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 64.2, E-value 2.8e-16" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 408780..408980 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 69.2, E-value 9.4e-18" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 409116..409439 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 137.7, FT E-value 2.1e-38" FT /inference="protein motif:Pfam:PF02518" FT CDS 409511..411001 FT /transl_table=11 FT /locus_tag="CBO0354" FT /product="putative lipoprotein" FT /note="Similar to Clostridium tetani conserved protein FT ctc01950 SWALL:Q892Y3 (EMBL:AE015942) (509 aa) fasta FT scores: E(): 4.1e-53, 35.15 38d in 512 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYP8" FT /protein_id="CAL81907.1" FT /translation="MRKSKILLIFMIFIYSLTITACVNLDNKNNIVAPNNNSCPIEGTW FT QFDFSNLDKDSKLRLRLKNKDVIINSKYIILGNEVCKSPDFKVKTVKTEEYFLYKLRLN FT PNKLNLDKKEIEVISTSLDNNPFYDFIKIDEKKLLVYVDNQLLVLTKKSNSSSIEPKHN FT IIEKNSQQDIVMPKRYTLLRTGVLIGLKSSEEDYVDGYKNEKKYRTIFISSRNRNLKNV FT IETENLFVPRKDGFCEIGVNRINNLSNIQDNIFVNPLYNNYPIKNNFRLEQDIKNKSIY FT RDILFVSNDYISIEYNDINKDKPIDLYKVKMLPIDNINAMAGVNIGDIIDKDSEKILAS FT SLESCIRSKDKDILNKLERSCRKDSFFLSRRNGHWILKGRLNGIDDKEEYIDFNINTEI FT PEKILNYDDLNLSWNSIKSKVPNALDAYTSPNKDLAIITTEKELYVYTIEDGKLSNKAI FT YEMELNKETVVMAEWATADYAKKWTDSILKNKNAHIIK" FT sig_peptide 409511..409583 FT /locus_tag="CBO0354" FT /note="probabilty 0.969, with cleavage site probability FT 0.491 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 409544..409576 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 410315..410380 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT /inference="protein motif:ProSite:PS00179" FT CDS 411045..411611 FT /transl_table=11 FT /locus_tag="CBO0355" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani putative rRNA FT methylase ctc00455 SWALL:Q898J2 (EMBL:AE015937) (192 aa) FT fasta scores: E(): 1.4e-32, 54.64 38d in 183 aa" FT /db_xref="InterPro:IPR010719" FT /db_xref="UniProtKB/TrEMBL:A5HYP9" FT /protein_id="CAL81908.1" FT /translation="MSKEKFNNAVNIAKYICENTLKFGDIAVDCTLGKGHDTILLANLV FT GNKGKVISFDIQKEAINKTREKLREFDYKNITLINDGHENLDKHIQEKVKLFIFNLGYL FT PGKDHNITTKAETTLKALKKALKLLDDNGIVLLVIYYGHENGKEEKAALEKFTSELDQK FT VYNVMKNSFINQANNPPLLICIEKR" FT CDS 411637..412311 FT /transl_table=11 FT /locus_tag="CBO0356" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani membrane spanning FT protein ctc01769 SWALL:Q893P4 (EMBL:AE015942) (220 aa) FT fasta scores: E(): 4.7e-43, 51.61 38d in 217 aa" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:A5HYQ0" FT /protein_id="CAL81909.1" FT /translation="MKNKKDLFKIIGLSLIIIIVAMFLLRHGHAIRRMNIKHTVRYIRS FT CGKFSSICFLLIYALKPLVIIIPASMLSLVGGVLFGPVKGFILNMLGFFLSGSLAFWLS FT RLLGKSFVDKILRGKAVELDNNIEKEGFKIIFLLRFPPIFPYDPISYASGLTKMKYKHF FT VLGSLLGVIPETMCYSYMGKNVMNPLTSKFIVPVIVVILTTIIGIYVYKKSKINVVKDE FT KL" FT sig_peptide 411637..411718 FT /locus_tag="CBO0356" FT /note="probabilty 0.922, with cleavage site probability FT 0.405 between residues 28 and 29" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(411664..411720,411781..411849,411892..411960, FT 412123..412182,412210..412269) FT /note="5 probable transmembrane helices predicted for FT CBO0356 by TMHMM2.0 at aa 10-28, 49-71, 86-108, 163-182 and FT 192-211" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 411781..412224 FT /note="Pfam match to entry PF00597 DedA, DedA family,score FT 14.5, E-value 0.00051" FT /inference="protein motif:Pfam:PF00597" FT CDS complement(412452..415139) FT /transl_table=11 FT /locus_tag="CBO0357" FT /product="putative signaling protein" FT /note="Similar to Chromobacterium violaceum hypothetical FT protein cv0542 SWALL:AAQ58219 (EMBL:AE016911) (633 aa) FT fasta scores: E(): 2.3e-57, 35.07 38d in 536 aa" FT /db_xref="GOA:A5HYQ1" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR001633" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR007892" FT /db_xref="UniProtKB/TrEMBL:A5HYQ1" FT /protein_id="CAL81910.1" FT /translation="MIIVKLYKKSLAIILLIFLVSIIITSILSKTYIMKKFNNIEIKYN FT VYKTEHLLKLINKDIQNIYNLNKDYAMWDDTYKFINDKNDNYIQTILKGSSIFKKFNID FT LILFVNKNNDVVFEQYYNKNEKLNKKDINYLSSIATSNKKNTHPIKGLTKFDDSLFLIT FT SSPITDSLNSKTPNGAMIFIKFLPKENINKIYGNNTNFQIIDFKNLYPVIYKKNNIFMI FT EHNDHLLESYGLIRDIFNNNTFMLKLNINRDIYFTAKENIKFFIFVIFILGIFMSILLI FT KILNELVLKKVHSIEKTLNYVAETADLSVRLDTTGNDEITSLNKNFNNMFDMLETSKEK FT IIENHKKYNYLFSSVITNFSYNKIIKNKDSDIVDFKVVEINNYFSELLNTDKENIIGEN FT ISSFIPSILNENPILIKSIKKISSIGGKETLEEIYIEELRKWFSAVVYSMEVDYFALLL FT TDITENKKDKEKILGLAYYDSLTGLSNRKKIIETINKTINNYENEKFAVLFIDLDHFKS FT INDTLGHDVGDYVLEKVSARFKMLLSPKHKIGRLGGDEFIIVQNITSISDAEKLACKIC FT TTLNHSIKYKEDDLFIGASIGISIYPEDGKDTSTLMKNADAAMYAAKKNGGYKYEVYSR FT SMNERALDDLILENRLRRALEKNELLVYFQPIYHLKTSKIIAMESLVRWKFDNKIISPN FT QFIPLAKNIGEIANIDNWVLNKACSQCNLWQKQNNKPLYVSVNISFKQMKDKNFVDNVL FT NILRTTKLKPSYLCLEITEDEAMEDVDLSIKTLEALKRHGIKISLDDFGTGYSSLSYVT FT KLPIDNIKIDKSIIKNIHKDNKSLQIVKSIILMSKSLDINIIAEGVETIEQLEILQELG FT CDFIQGFYISEPLPIKTFQSKFIR" FT misc_feature complement(412476..413213) FT /note="Pfam match to entry PF00563 EAL, EAL domain, score FT 376.1, E-value 3.8e-110" FT /inference="protein motif:Pfam:PF00563" FT misc_feature complement(413253..413729) FT /note="Pfam match to entry PF00990 GGDEF, GGDEF FT domain,score 175.3, E-value 1e-49" FT /inference="protein motif:Pfam:PF00990" FT misc_feature complement(414132..414344) FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 44.2, E-value 3e-10" FT /inference="protein motif:Pfam:PF00672" FT misc_feature complement(order(414297..414350,415053..415112)) FT /note="2 probable transmembrane helices predicted for FT CBO0357 by TMHMM2.0 at aa 10-29 and 264-281" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(414513..414983) FT /note="Pfam match to entry PF05228 CHASE4, CHASE4 FT domain,score 66.4, E-value 6.5e-17" FT /inference="protein motif:Pfam:PF05228" FT sig_peptide complement(415049..415139) FT /locus_tag="CBO0357" FT /note="probabilty 0.996, with cleavage site probability FT 0.887 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT CDS complement(415330..416517) FT /transl_table=11 FT /locus_tag="CBO0358" FT /product="putative exported protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc01330 SWALL:Q895E6 (EMBL:AE015940) (403 aa) fasta FT scores: E(): 1.5e-80, 50 38d in 398 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYQ2" FT /protein_id="CAL81911.1" FT /translation="MNKRKKLILIITLCISITYLFLYNNNKTYVYTSLQEENSLDKDSV FT KNSLEEIYKKRCEAFTSLDLKSLNDYFNTSHKYGEWALAHEIKRIKYLNDWSYNRGIKF FT TNVASSLKYRKISPTKRGVRVSLDEIYKFDYEYKSDETPTKNSFGVSIQHTVDLIKKDD FT KWIIFTDWYTDCFEDALKSYSADTDSLAKQTSPPKYNINSCSRNHEPNYEGKYNRIRAV FT EYADKYCGIPWASGNDLRHNKKYKNFTGAGGDCTNYVSQVLGDKEAGSLPFDGAWYCRY FT HKYGGGEGSKAWVNADAFRNYLIYSGKGNLIKKGSFEDLIKPNDNHACGVIEKLELGDM FT ICYALGSNIDHFAVVTGWDSHGYPLVNSHTTNRYRVPWDLGWGDKNIFFHLIHIK" FT sig_peptide complement(416424..416517) FT /locus_tag="CBO0358" FT /note="probabilty 0.857, with cleavage site probability FT 0.258 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS 416770..418110 FT /transl_table=11 FT /locus_tag="CBO0359" FT /product="putative drug/sodium antiporter" FT /note="Similar to Thermoanaerobacter tengcongensis FT na+-driven multidrug efflux pump NorM2 or tte1811 FT SWALL:Q8R919 (EMBL:AE013133) (449 aa) fasta scores: E(): FT 1.7e-69, 42.41 38d in 448 aa" FT /db_xref="GOA:A5HYQ3" FT /db_xref="InterPro:IPR002528" FT /db_xref="UniProtKB/TrEMBL:A5HYQ3" FT /protein_id="CAL81912.1" FT /translation="MTKRYPMKEILDTSIPIIAEMTLYNLMIVFDMMMIGNYGGNKCLT FT AVGLSNGVIFTLCDVFISVGLAVSVTSLIARSIGSRHYKNAQQYSICGLFLGVIISFLI FT SYFMFYKSEKILYIAGARGDILKIANVFNKTMAISIFFKMNTEIINSILRGYKNTKIPF FT FTAVIISSCKIILDFIFIFGIGKNGLGVFGAALASILSQIVGFTFSFIYMLDKLKSHGN FT INLFKLFKIDKIKDILNMYIPASLEEATYSVSRLLCAFMIIKIGSISFSANEIANTIET FT VSIIPSAALGVSATTLVGMKIGEKDYRGAKEYANKSVWFAVSISLIFSLLFIFMPNLLV FT GCFVGNKEKNVVKLATVCLLVGAIEQPFIAASTVVEDILKGMGDAKTPFIVTLISSWCI FT RVPLFYYYIYKLKYSVVCVWWITAFQWFIDFLLMKIILKKKFNKFKL" FT misc_feature order(416806..416874,416926..416994,417031..417099, FT 417142..417195,417256..417324,417337..417405, FT 417610..417678,417721..417789,417823..417891, FT 417934..417993,418012..418080) FT /note="11 probable transmembrane helices predicted for FT CBO0359 by TMHMM2.0 at aa 13-35, 53-75, 88-110, FT 125-142,163-185, 190-212, 281-303, 318-340, 352-374, FT 389-408 and 415-437" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 416815..417306 FT /note="Pfam match to entry PF01554 MatE, MatE, score FT 93.4,E-value 4.9e-25" FT /inference="protein motif:Pfam:PF01554" FT misc_feature 417496..417987 FT /note="Pfam match to entry PF01554 MatE, MatE, score 127.2, FT E-value 3.3e-35" FT /inference="protein motif:Pfam:PF01554" FT CDS 418302..418868 FT /transl_table=11 FT /locus_tag="CBO0360" FT /product="putative metal dependent phosphohydrolase" FT /note="Similar to Thermotoga maritima hypothetical protein FT Tm1558 tm1558 SWALL:Q9X1P4 (EMBL:AE001801) (182 aa) fasta FT scores: E(): 4.9e-25, 47.09 38d in 189 aa" FT /db_xref="GOA:A5HYQ4" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5HYQ4" FT /protein_id="CAL81913.1" FT /translation="MFSREKAEELLLNNLKSEHLIKHSYAVEAVMRGLAKKLDPENIDK FT WGITGLLHDLDADIVDYVQNPHLHGPKTVEILKAEGFGDEDMYNAICAHNQGSGTEIKS FT KMDQAIYAADPITGFITAITLVYPDKKISSVKVKSITKRMKEKRFAAGANREAMKSIEK FT LGIEFPQFAELSLNSMEEISQVLGL" FT misc_feature 418359..418658 FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 26.1, E-value 8.6e-05" FT /inference="protein motif:Pfam:PF01966" FT CDS 419173..420447 FT /transl_table=11 FT /locus_tag="CBO0361" FT /product="putative Na(+)/H(+) antiporter" FT /note="Similar to Methanosarcina mazei putative Na(+)/H(+) FT antiporter mm0294 SWALL:Q8Q044 (EMBL:AE013254) (596 aa) FT fasta scores: E(): 2.4e-25, 30.64 38d in 385 aa" FT /db_xref="GOA:A5HYQ5" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR018421" FT /db_xref="InterPro:IPR018422" FT /db_xref="UniProtKB/TrEMBL:A5HYQ5" FT /protein_id="CAL81914.1" FT /translation="MKMETNVILSANNILKLIALVILAGVVFGKISRKVNLPDVVLFIL FT AGVILGPEVLNLINIDSYPVGNQLILTFGAAYILYDGGREIDLKVFNEVKISVLLLSTL FT GVLISTGITGFFVYKIFHIDFIYALLLGAIISSTDPSVLVPLFKNMNVSNKLKQTIISE FT SAFNDAAAAIVTFAILGVIAGGEFSLGKSIFELLKSSLGGILIGGIFGYISTKLIAGEK FT YAFLKEFPSEVSIVAVIGTYLIADKLGVSGFMAVFIIGMVCGNKKRINCCIPDEYNQTH FT LRFKEVLTIILRMMIFVLLGSHIDFGVLSKYFTKDLMVVALLIFVSRPVSAFLSVIFDR FT KAKWNIKEIIYLMWVRETGVIPAALVGMLLTMHIKNSDIIASVTFITIIITLTFQASTS FT KSLAKLLKLDLDEGKKEIAVDSIKI" FT misc_feature order(419191..419259,419287..419346,419359..419415, FT 419458..419526,419545..419613,419671..419739, FT 419758..419826,419884..419952,420031..420099, FT 420127..420186,420220..420288,420301..420354) FT /note="12 probable transmembrane helices predicted for FT CBO0361 by TMHMM2.0 at aa 7-29, 39-58, 63-81, FT 96-118,125-147, 167-189, 196-218, 238-260, 287-309, FT 319-338,350-372 and 377-394" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 419212..420402 FT /note="Pfam match to entry PF00999 FT Na_H_Exchanger,Sodium/hydrogen exchanger family, score FT 214.1, E-value 2.2e-61" FT /inference="protein motif:Pfam:PF00999" FT misc_feature 419725..419748 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 419944..420021 FT /note="PS00217 Sugar transport proteins signature 2." FT /inference="protein motif:ProSite:PS00217" FT CDS complement(420582..421904) FT /transl_table=11 FT /locus_tag="CBO0362" FT /product="putative aminotransferase" FT /note="Similar to Clostridium tetani putative FT aminotransferase ctc01359 SWALL:Q895C0 (EMBL:AE015940) (440 FT aa) fasta scores: E(): 6.2e-91, 55.55 38d in 432 aa" FT /db_xref="GOA:A5HYQ6" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR020578" FT /db_xref="UniProtKB/TrEMBL:A5HYQ6" FT /protein_id="CAL81915.1" FT /translation="MYSNKRSPYRYLVVGSDTKVPLYNGQLTPCINFDNAATTPPLASV FT MNAIVNFSPWYSSIHRGTGYKSQLSSKIYEDSRKTVGKFIGADLDKDVIIYVKNTTEAI FT NKLSYRLCSCDDDSIILTTSMEHHSNDLPWRDKYNVDYIEVDDCGRLVMEDLRSKLIRY FT GDKVKLVTIAGASNVTGYINPIYDIAKLVHEFGCKILVDGAQLVPHCKLSMKPHDSLEH FT IDYLAFSAHKMYAPFGIGVLIGPKETFERGDPDYKGGGTVNVVTKDYVLWTDPPEKDEA FT GTPNVMGVIALAKAIDTMTGIGMKNIEIYEQDIFEYAFRKIAQIPDIKIYSCKNLDYPR FT VAIIPFNISGMHHSITAEILSKEFGIAVRNGCFCAQPYVQKILNIPKEEIGSYANEPMN FT KRPGMVRLSFGMYNDIYEIDFLVMALNKIVQNKNKYLEKYG" FT misc_feature complement(420642..421790) FT /note="Pfam match to entry PF00266 FT aminotran_5,Aminotransferase class-V, score -35.7, E-value FT 7e-08" FT /inference="protein motif:Pfam:PF00266" FT misc_feature complement(421179..421238) FT /note="PS00595 Aminotransferases class-V FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00595" FT CDS 422291..423301 FT /transl_table=11 FT /locus_tag="CBO0363" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani membrane spanning FT protein, similar to vegetatible incompatibility protein FT het-e-1 ctc01844 SWALL:Q893H9 (EMBL:AE015942) (345 aa) FT fasta scores: E(): 2.1e-54, 46.66 38d in 345 aa" FT /db_xref="GOA:A5HYQ7" FT /db_xref="InterPro:IPR018383" FT /db_xref="UniProtKB/TrEMBL:A5HYQ7" FT /protein_id="CAL81916.1" FT /translation="MERLKTILPGILLSFFIAILATWLGNLLPVIGGAVFGIIIGIIIN FT NIIGKPKNTIEGVAFTSKKVLQWAIIVLGAGLSLSQVRKTGLESLEVTIFTIATAFITA FT YVVGKFFKIPDKLKTLIGVGTAICGGSAIAAISPIIEADEVEIAYSISTIFLFNIIAVL FT IFPPLGHLLGFSDKAFGLWAGTAINDTSSVVAAGYAFSNKAGEYATIVKLTRATLIIPI FT SLIFAFITAYKKKKEAEMGTGEVNYSFKKIFPWFILWFLVASLLNTMGLFKGNTIHYIN FT ELGKFLIVMALSAIGLSSNFKEMTKAGFKPILLGVIVWFNVAVVSIIIQFITGQI" FT sig_peptide 422291..422399 FT /locus_tag="CBO0363" FT /note="probabilty 0.973, with cleavage site probability FT 0.550 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(422309..422365,422378..422437,422483..422536, FT 422564..422623,422648..422716,422729..422797, FT 422822..422890,422918..422986,423047..423106, FT 423119..423187,423224..423292) FT /note="11 probable transmembrane helices predicted for FT CBO0363 by TMHMM2.0 at aa 7-25, 30-49, 65-82, FT 92-111,120-142, 147-169, 178-200, 210-232, 253-272, 277-299 FT and 312-334" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 422315..423235 FT /note="Pfam match to entry PF03601 Cons_hypoth698,Conserved FT hypothetical protein 698, score 344.6, E-value 1.1e-100" FT /inference="protein motif:Pfam:PF03601" FT CDS 423432..424106 FT /transl_table=11 FT /locus_tag="CBO0364" FT /product="putative phosphatase" FT /note="Similar to Clostridium tetani ser/thr and tyr FT protein phosphatase ctc02044 SWALL:Q892P9 (EMBL:AE015943) FT (208 aa) fasta scores: E(): 6e-36, 43.35 38d in 203 aa" FT /db_xref="GOA:A5HYQ8" FT /db_xref="InterPro:IPR000326" FT /db_xref="UniProtKB/TrEMBL:A5HYQ8" FT /protein_id="CAL81917.1" FT /translation="MIHKIKENIVPLSLMLIIPVVNVFYAILNNSNRGVYTLVTDLDKS FT MPFIPAFSVPYMVWYPFIIISLIYMCFKNRKLYYKSLSSIIISLITSYIIFFFFQTTVP FT RPKVIGNDIFSDIVKFIYSTDIAYNCFPSIHVITTYIIMRYMLNHEMKNSKIINITVII FT LGILIILSTQFIKQHVLLDAIFAIILGEGIYNMINYYGLEMIKKCQQKKSLLLMMKKKS FT EI" FT misc_feature order(423453..423515,423573..423641,423660..423728, FT 423792..423860,423897..423956,423969..424037) FT /note="6 probable transmembrane helices predicted for FT CBO0364 by TMHMM2.0 at aa 13-33, 53-75, 82-104, FT 126-148,161-180 and 185-207" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 423618..424049 FT /note="Pfam match to entry PF01569 PAP2, PAP2 FT superfamily,score 0.9, E-value 0.0029" FT /inference="protein motif:Pfam:PF01569" FT CDS 424052..424750 FT /transl_table=11 FT /locus_tag="CBO0365" FT /product="two-component response regulator" FT /note="Similar to Enterococcus faecium regulatory protein FT VanR vanR SWALL:VANR_ENTFC (SWALL:Q06239) (231 aa) fasta FT scores: E(): 2.2e-41, 51.94 38d in 231 aa" FT /db_xref="GOA:A5HYQ9" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HYQ9" FT /protein_id="CAL81918.1" FT /translation="MSAEKILIVDDEKEIRDLIDIYLTNEGYITLKASNGIEALELLKT FT NNVHLIILDIMMPKMDGIEACMKIREEKSMPIIMLSAKSEDMDKIIGLTTGADDYITKP FT FNPLELLARVKSQLRRYIKLNNSNGNENEDIVTIEDITINVATHEVKIGDQPVRLTPRE FT FDILELLARNRGVVFSIEKIYELVWKEEFLDSNNTVMVHIRKLREKIEQNPRNPRYIKT FT VWGVGYKVEK" FT misc_feature 424061..424417 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 146.2, E-value 6e-41" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 424511..424741 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 102.7, E-value 7.5e-28" FT /inference="protein motif:Pfam:PF00486" FT CDS 424776..426254 FT /transl_table=11 FT /locus_tag="CBO0366" FT /product="two-component sensor kinase" FT /note="Similar to Enterococcus faecalis VansE SWALL:Q93A42 FT (EMBL:AF430807) (357 aa) fasta scores: E(): 1.1e-25,32.16 FT 38d in 370 aa" FT /db_xref="GOA:A5HYR0" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HYR0" FT /protein_id="CAL81919.1" FT /translation="MKPFKYIYKLISYKVKKSLRLELIFTFGLCFLMAIMTFIITNSYL FT TKASKYSEINYEKGINEIYNYSLSISNEINSEKLKIEDKDTIQELIDRHWSMDKNNKIF FT IANTDGKILFKVENVEVEKVDIFEIIKNNIQLQNIKSYEYDYDVGRKEFVSINPLIFEN FT GKAYVIVQGIPRAETIYYTKDKSVSAFLLAVIVFIFGFLFITKRKMNYIEEISKGLLQI FT SKGNLDYRVKRVGNDELALLADNINYMAKELTDKIEKERKIEKAKNDLITNVSHDLRTP FT LTSIMGYLGLIKEKKFKSEKELMEYASVAYTKSEKLKNLIQDLFSYTKYSNDRVELHKQ FT KIILAELLDQLIEELVPICEENKVSINKYAWDSEIVSEIDADKMVRVFENLIMNAIRYS FT IKPGEIKINLYKERVFSMVSISNKSEEISKDNLRKLFDRFYRLDKSRTASTGGSGLGLA FT IAKSIVELHKGSIWAEYQKGYITFYIKLIMAEDE" FT sig_peptide 424776..424908 FT /locus_tag="CBO0366" FT /note="probabilty 0.996, with cleavage site probability FT 0.290 between residues 45 and 46" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(424842..424910,425331..425390) FT /note="2 probable transmembrane helices predicted for FT CBO0366 by TMHMM2.0 at aa 23-45 and 186-205" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 425331..425540 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 50.6, E-value 3.7e-12" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 425571..425774 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 61.2, E-value 2.3e-15" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 425910..426242 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 101.3, FT E-value 2e-27" FT /inference="protein motif:Pfam:PF02518" FT CDS 426362..427777 FT /transl_table=11 FT /locus_tag="CBO0367" FT /product="sodium/solute symporter" FT /note="Similar to Escherichia coli sodium/pantothenate FT symporter PanF or b3258 SWALL:PANF_ECOLI (SWALL:P16256) FT (483 aa) fasta scores: E(): 1.3e-21, 24.83 38d in 451 aa" FT /db_xref="GOA:A5HYR1" FT /db_xref="InterPro:IPR001734" FT /db_xref="UniProtKB/TrEMBL:A5HYR1" FT /protein_id="CAL81920.1" FT /translation="MKGYLIFIIIYAIILILAGFFVKKYVKGAADFFVAGRKLNSKLLC FT TTLIAANIGAGSTVGITGIAYKYGVSSYWWIFMSAIGTAVLAFLVGPKIWEKSMKYNLY FT TLGDYLDIRYSKYFKGAISIMMTIGTLALFAGQLMGIAWILDVTSGIDKNIGILIGAVV FT VVLYFSSGGLLSSAIVNVLELVIIILGFIIAVPFCIKSVNGFSGLHTAILNNLPANEGV FT NYFSLKGIGISTIVGWFLMLTPSFFISPGLIGKVYGAKDMKTIKKGAGICAVVQGLFAF FT LPTILGMCAFAVFPNLNQQELALPMVMKNLMPFSVSALALAAIFAAEVSTADAVLYMLT FT TTFTEDIYKTFINPKIEDKKLLKAGRIVTIVGGILGVAMAFILPNIITALSIFYTLMSV FT SLTVPLLFGLFSEKPNTKIAFTSSIIGIIVTLYLQFQNNDKGIWILNAQSTGILCSLIV FT MMIFLALKKKITT" FT sig_peptide 426362..426443 FT /locus_tag="CBO0367" FT /note="probabilty 0.766, with cleavage site probability FT 0.751 between residues 28 and 29" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(426371..426427,426488..426556,426569..426637, FT 426728..426796,426824..426892,426911..426979, FT 427049..427117,427175..427243,427313..427381, FT 427442..427510,427520..427588,427607..427660, FT 427688..427756) FT /note="13 probable transmembrane helices predicted for FT CBO0367 by TMHMM2.0 at aa 4-22, 43-65, 70-92, FT 123-145,155-177, 184-206, 230-252, 272-294, 318-340, FT 361-383,387-409, 416-433 and 443-465" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 426455..427639 FT /note="Pfam match to entry PF00474 SSF, Sodium:solute FT symporter family, score 47.2, E-value 3.9e-11" FT /inference="protein motif:Pfam:PF00474" FT CDS 429001..430320 FT /transl_table=11 FT /gene="rnfC" FT /locus_tag="CBO0368" FT /product="electron transport complex protein" FT /note="Similar to Rhodobacter capsulatus electron transport FT complex protein RnfC SWALL:RNFC_RHOCA (SWALL:Q52716) (519 FT aa) fasta scores: E(): 1.1e-57, 39.18 id in 444 aa" FT /db_xref="GOA:A5HYR2" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR010208" FT /db_xref="InterPro:IPR011538" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/TrEMBL:A5HYR2" FT /protein_id="CAL81921.1" FT /translation="MELLTFKKGVHPPHGKYLTEKKPIEEYLPKGDLVFPMSQHIGAPC FT NPVVKKGDRVLVGQVIGEATGFVSAPIHSSVSGTVKNLAPVLTAAGTKVMAVIVENDGQ FT YEEIEMPKPKDYNEMTKEEIIKLIQQAGIVGMGGACFPTHVKLSPPPDKKIDSIIVNAA FT ECEPYLTCDHRLMLEESDKIVEGLKIILKIFPEAKGYIGIENNKPDAIEAMKKASEGIA FT NIEVKALKTKYPQGAEKQLIYAIKGREVQSGKLPADAGCVVQNTATVREIYNAVVLGRP FT LIERIITVTGEAVKEPKNIRMKLGTNLRELVEFCGGYKEDPVKVISGGPMMGMTIPTLD FT IPTVKGSSGLLSLTTAQAVLPQASSCIRCGRCVEACPMNLIPSTLDSLSNRGELASFEE FT LHGIDCIECGCCTFVCPAKRHLIQSIRTAKRTVIASKRKK" FT misc_feature 429322..429990 FT /note="Pfam match to entry PF01512 FT Complex1_51K,Respiratory-chain NADH dehydrogenase 51 Kd FT subunit, score 149.7, E-value 5.4e-42" FT /inference="protein motif:Pfam:PF01512" FT misc_feature 430075..430146 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 23.7, E-value 4.6e-05" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 430096..430131 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 430213..430248 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 430343..431275 FT /transl_table=11 FT /gene="rnfD" FT /locus_tag="CBO0369" FT /product="electron transport complex protein" FT /note="Similar to Pseudomonas stutzeri electron transport FT complex protein RnfD SWALL:RNFD_PSEST (SWALL:Q9EVN4) (354 FT aa) fasta scores: E(): 1.1e-19, 38.29 38d in 329 aa" FT /db_xref="GOA:A5HYR3" FT /db_xref="InterPro:IPR004338" FT /db_xref="InterPro:IPR011303" FT /db_xref="UniProtKB/TrEMBL:A5HYR3" FT /protein_id="CAL81922.1" FT /translation="MSESMYTLSSSPHIRSKDSVQSIMRDVVIALLPAAIAGIYFFKLK FT ALLVILTAVISCVAAEYIWEKATGRDISIGDLSAVVTGMLLAFNVPPTLPLWMIVIGSF FT FSIIVVKQFFGGIGQNIVNPALAGRAFLLASWPVAMTTWTVDGVTTATPLAILKGAPGE FT LPNLASAFVGHIGGCIGETSALALLIGFAYLLYRRIITWHIPVAYVGTVFVLTTIIGRH FT GAMSGNAIYEIFVGGLMLGAIFMATDYTTSPMTKKGQVIFAIGCGVITTVIRIFGGYPE FT GVSYSIILMNLVVPLIDKFVAPRVFGGVK" FT misc_feature 430355..431269 FT /note="Pfam match to entry PF03116 NQR2_RnfD_RnfE, FT NQR2,RnfD, RnfE family, score 326.2, E-value 3.9e-95" FT /inference="protein motif:Pfam:PF03116" FT misc_feature order(430400..430468,430481..430534,430628..430696, FT 430730..430798,430856..430924,430937..431005, FT 431015..431083,431120..431173,431201..431269) FT /note="9 probable transmembrane helices predicted for FT CBO0369 by TMHMM2.0 at aa 20-42, 47-64, 96-118, FT 130-152,172-194, 199-221, 225-247, 260-277 and 287-309" FT /inference="protein motif:TMHMM:2.0" FT CDS 431275..431946 FT /transl_table=11 FT /gene="rnfG" FT /locus_tag="CBO0370" FT /product="electron transport complex protein" FT /note="Similar to Pseudomonas stutzeri electron transport FT complex protein RnfG SWALL:RNFG_PSEST (SWALL:Q9EVN3) (228 FT aa) fasta scores: E(): 5.1e-07, 30.15 38d in 189 aa" FT /db_xref="GOA:A5HYR4" FT /db_xref="InterPro:IPR007329" FT /db_xref="InterPro:IPR010209" FT /db_xref="UniProtKB/TrEMBL:A5HYR4" FT /protein_id="CAL81923.1" FT /translation="MEKNETLKLGLKLFIITAIAGLILGGAFVITKKPIADQVEKTNTE FT AMKEILPKADKFEKMEGKAKDAVTEVNEGKKGNDVAGYAIKVLTKGYGGQIEMMVGVSK FT EGKVEGIKILSHSETPGLGANAPQPKFSGQFKGKSTEKDLEVVKTAPGKDNEIEAMTGA FT TITSKAVTKGVNDAVKFYKDELLKTPSESKEVDGKSGATTSFNTEDTKLNKYVVNYEKM FT N" FT sig_peptide 431275..431380 FT /gene="rnfG" FT /locus_tag="CBO0370" FT /note="probabilty 0.854, with cleavage site probability FT 0.431 between residues 36 and 37" FT /inference="protein motif:SignalP:2.0" FT misc_feature 431299..431367 FT /note="1 probable transmembrane helix predicted for CBO0370 FT by TMHMM2.0 at aa 9-31" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 431527..431817 FT /note="Pfam match to entry PF04205 FMN_bind, FMN-binding FT domain, score 78.3, E-value 1.7e-20" FT /inference="protein motif:Pfam:PF04205" FT CDS 431960..432559 FT /transl_table=11 FT /gene="rnfE" FT /locus_tag="CBO0371" FT /product="electron transport complex protein" FT /note="Similar to Rhodobacter capsulatus electron transport FT complex protein RnfE SWALL:RNFE_RHOCA (SWALL:P97055) (243 FT aa) fasta scores: E(): 1.1e-27, 48.76 id in 203 aa" FT /db_xref="GOA:A5HYR5" FT /db_xref="InterPro:IPR003667" FT /db_xref="InterPro:IPR010968" FT /db_xref="UniProtKB/TrEMBL:A5HYR5" FT /protein_id="CAL81924.1" FT /translation="MSVLGERLKNGIIDENVTFVQVLAMCPTLAVTSSAENGIGMGIAS FT TVVLMGSNLVISLLRKVIPDKIRIPAFIVVIAGFVTLLQFLMQGFVPDLYTKLGIFIPL FT IVVNCVILGRAEAYASKYGPVSSIFDGLGQGLGFTLSLGVIGMIRELLGAGQLFGHQIM FT PSSFQPALIMILAPGAFFTLGILMAIINNMKLKKAK" FT misc_feature 431960..432523 FT /note="Pfam match to entry PF02508 Rnf-Nqr, Rnf-Nqr FT subunit, membrane protein, score 239.7, E-value 4.4e-69" FT /inference="protein motif:Pfam:PF02508" FT misc_feature order(432071..432139,432158..432226,432254..432313, FT 432350..432418,432461..432529) FT /note="5 probable transmembrane helices predicted for FT CBO0371 by TMHMM2.0 at aa 38-60, 67-89, 99-118, 131-153 and FT 168-190" FT /inference="protein motif:TMHMM:2.0" FT CDS 432610..433188 FT /transl_table=11 FT /gene="rnfA" FT /locus_tag="CBO0372" FT /product="electron transport complex protein" FT /note="Similar to Escherichia coli, Escherichia coli O6,and FT Escherichia coli O157:H7 electron transport complex protein FT RnfA or b1627 or c2019 or z2633 or ecs2336 SWALL:RNFA_ECOLI FT (SWALL:P76181) (193 aa) fasta scores: E(): 2.5e-36, 55.91 FT 38d in 186 aa" FT /db_xref="GOA:A5HYR6" FT /db_xref="InterPro:IPR003667" FT /db_xref="InterPro:IPR011293" FT /db_xref="UniProtKB/TrEMBL:A5HYR6" FT /protein_id="CAL81925.1" FT /translation="MKIFALIISALFVNNFVLARFLGICSFLGVSKKVETATGMGLAVT FT FVMALASLISYIVYNAILVPLNITYLYTIAFILVIAALVQFVEMVIKKKSPGLYKALGI FT FLPLITTNCAILGAVIINMNDKLNLIESLIFGTFSGVGYMLAIVLLAGLRERMEACDKM FT PKAMQGLPISLITAGLMAIAFLGFQGLLH" FT misc_feature 432610..433185 FT /note="Pfam match to entry PF02508 Rnf-Nqr, Rnf-Nqr FT subunit, membrane protein, score 286.1, E-value 4.7e-83" FT /inference="protein motif:Pfam:PF02508" FT misc_feature order(432622..432681,432718..432786,432814..432882, FT 432901..432969,432997..433065,433114..433182) FT /note="6 probable transmembrane helices predicted for FT CBO0372 by TMHMM2.0 at aa 5-24, 37-59, 69-91, FT 98-120,130-152 and 169-191" FT /inference="protein motif:TMHMM:2.0" FT CDS 433202..434035 FT /transl_table=11 FT /gene="rnfB" FT /locus_tag="CBO0373" FT /product="electron transport complex protein" FT /note="Similar to Rhodobacter capsulatus electron transport FT complex protein RnfB SWALL:RNFB_RHOCA (SWALL:Q07394) (187 FT aa) fasta scores: E(): 1.8e-12, 41.61 id in 161 aa" FT /db_xref="GOA:A5HYR7" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR007202" FT /db_xref="InterPro:IPR010207" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5HYR7" FT /protein_id="CAL81926.1" FT /translation="MNELLFPILSLGALGLVFGVLLGYASKKFAVEVDPKVPLIRDSLP FT GANCGGCGYAGCDAYAQAVAEGAAPANACTVGGASVAEKVAEIMGVSIDESEPLKAYVK FT CNGTCDKAKQRGEYYGTMDCQQASVVPGGASKSCQAGCLGLGSCVKACAFDAIHVTEGG FT TAEVDPEKCVGCGACVKACPRAVIDLKPLSAVIRVACNSKDTLKAVKDVCQVGCMTCRL FT CEKTCPVKAITMENNLPVVDKEKCVKCMACVKKCPTNALIAYGKDIVVKEEKPAN" FT sig_peptide 433202..433274 FT /gene="rnfB" FT /locus_tag="CBO0373" FT /note="probabilty 0.950, with cleavage site probability FT 0.620 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 433211..433279 FT /note="1 probable transmembrane helix predicted for CBO0373 FT by TMHMM2.0 at aa 4-26" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 433328..433432 FT /note="Pfam match to entry PF04060 FeS, Putative Fe-S FT cluster, score 51.2, E-value 2.5e-12" FT /inference="protein motif:Pfam:PF04060" FT misc_feature 433694..433765 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 38.3, E-value 1.8e-08" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 433715..433750 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 433850..433885 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 433916..433987 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 37.7, E-value 2.8e-08" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 433937..433972 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT repeat_region 434082..434117 FT /rpt_family="CB.553" FT /rpt_type=DIRECT FT /rpt_unit_seq="aaaagagttaagtaaataaatttacttaactctttt" FT /inference="ab initio prediction:REPuter" FT CDS 434381..435469 FT /transl_table=11 FT /locus_tag="CBO0374" FT /product="putative cell Surface Protein" FT /note="Similar to the N-terminal region of Clostridium FT difficile Cwp66 SWALL:Q9FA27 (EMBL:AF093106) (610 aa) fasta FT scores: E(): 1.7e-14, 30.85 38d in 350 aa, and to Bacillus FT subtilis N-acetylmuramoyl-L-alanine amidase CwlB precursor FT LycT or cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) FT (496 aa) fasta scores: E(): 4.4e-08, 29.64 id in 361 aa" FT /db_xref="InterPro:IPR007253" FT /db_xref="UniProtKB/TrEMBL:A5HYR8" FT /protein_id="CAL81927.1" FT /translation="MLKKNKKILSVITATLVMAIGISFTNVQAASIKRMNGSNRIDTAN FT KTAKEIFQKSEAVILVNGTGYADAVSSAPLSKLLNAPILLTENKGALESDVLKTINDLQ FT NVKKIYIVGGTGVVSTTMENSLKSKGFQVIRYDGQKYGDKTRYGTNARVAEEILKLSPK FT SKTGILVNGQDGYADALSVASVAATNGYPVLFGNTQNVPNVIKNNIISKNKLQILAVGG FT SGVLPSSVVSSVSGKKITSDAQSKNRFQTNLAVLEYFKGKGGLDFSNVYIAAGGQAGKA FT GQSQFADALVASAAAAKTGSPLVLSGLGAGTTEIANAEKFIETNIEDEGNLVIVGGKAS FT VSEAVEQKLDEKVGDFRILDIL" FT sig_peptide 434381..434465 FT /locus_tag="CBO0374" FT /note="probabilty 1.000, with cleavage site probability FT 0.982 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 434477..434755 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 48.1, E-value 2e-11" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 434795..435079 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 35.9, E-value 9.6e-08" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 435236..435424 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 13.2, E-value 0.0018" FT /inference="protein motif:Pfam:PF04122" FT repeat_region 435473..435528 FT /rpt_unit_seq="(agagtat)8" FT repeat_region 435533..435568 FT /rpt_family="CB.553" FT /rpt_type=DIRECT FT /rpt_unit_seq="aaaagagttaagtaaataaatttacttaactctttt" FT /inference="ab initio prediction:REPuter" FT CDS complement(435663..436199) FT /transl_table=11 FT /locus_tag="CBO0375" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani heptaprenyl FT diphosphate synthase component I ctc01025 SWALL:Q896H9 FT (EMBL:AE015939) (181 aa) fasta scores: E(): 2.6e-38,63.37 FT 38d in 172 aa" FT /db_xref="InterPro:IPR010898" FT /db_xref="InterPro:IPR014535" FT /db_xref="UniProtKB/TrEMBL:A5HYR9" FT /protein_id="CAL81928.1" FT /translation="MKNKNYNTRKMIFLSLMVGIALIIYIIEAQIPVLFPGIKLGLANV FT ISLVTLIMLGGYEALLVMFLRTLLGSMFAGNMSSFMFSLAGGFLSNIIMIILYYKFKEN FT LSLSSISICGAIFHNIGQLFIAAFVVKDFRIYVYLPVLMISGIITGYFIGLCTKYLNKN FT LGNVKLFNELKNNEK" FT misc_feature complement(order(435729..435797,435810..435878, FT 435906..435965,436002..436070,436098..436166)) FT /note="5 probable transmembrane helices predicted for FT CBO0375 by TMHMM2.0 at aa 12-34, 44-66, 79-98, 108-130 and FT 135-157" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(436109..436199) FT /locus_tag="CBO0375" FT /note="probabilty 0.997, with cleavage site probability FT 0.706 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT CDS complement(436217..436609) FT /transl_table=11 FT /locus_tag="CBO0376" FT /product="putative exported protein" FT /note="Similar to Clostridium tetani membrane associated FT protein ctc01026 SWALL:Q896H8 (EMBL:AE015939) (132 aa) FT fasta scores: E(): 1.8e-16, 43.28 38d in 134 aa" FT /db_xref="InterPro:IPR010739" FT /db_xref="InterPro:IPR024045" FT /db_xref="UniProtKB/TrEMBL:A5HYS0" FT /protein_id="CAL81929.1" FT /translation="MKKGDKIVIYIVSILLALSVISIIFFKFFVKSENAVAVIKQNGKI FT IEKVDLSKVKEKRQLKINYNDKDHKGYNVIEIDKGSIRFIDADCPDKVCIKSGVLKKPG FT ETAACLPHKIIITIEKNDKEVDEVSY" FT sig_peptide complement(436501..436609) FT /locus_tag="CBO0376" FT /note="probabilty 0.946, with cleavage site probability FT 0.574 between residues 35 and 36" FT /inference="protein motif:SignalP:2.0" FT misc_feature complement(436532..436591) FT /note="1 probable transmembrane helix predicted for CBO0376 FT by TMHMM2.0 at aa 7-26" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(436724..437758) FT /transl_table=11 FT /locus_tag="CBO0377" FT /product="putative lipoprotein" FT /note="Similar to Clostridium tetani thiamine biosynthesis FT lipoprotein apbe precursor ApbE or ctc01027 SWALL:Q896H7 FT (EMBL:AE015939) (342 aa) fasta scores: E(): 1.2e-63,53.48 FT 38d in 344 aa" FT /db_xref="InterPro:IPR003374" FT /db_xref="InterPro:IPR024932" FT /db_xref="UniProtKB/TrEMBL:A5HYS1" FT /protein_id="CAL81930.1" FT /translation="MKIKYVTILLLCICLPLVFVGCDSKSEEPVSRETYLMGTIINIKA FT YGKDADKAVQASVDKISDIENKMSLNISTSEVNKINKNAGIVPVKVSKNTFDVVKASLI FT YSEKSKGSFDITVEPLVSLWGIGTDKARIPSKDEINNALKLINYKDVIINEKESTVMLK FT RKGQAIDLGAIAKGYTADELKKVLLNYNVSSAFLSLGGNVYVLGNKPDKTLWKIGVQNP FT LEPRGDYLGIVSVSDKSVVTSGNYERFFERNGKRYHHIFDTKTGYPAEKGLISVSIISD FT KSIDGDALSTSVYTLGLDEGKKLIESLKGVEAIFVTNDKKVYVTSGLKDIFKLTNTDFK FT LQNK" FT misc_feature complement(436772..437731) FT /note="Pfam match to entry PF02424 ApbE, ApbE family,score FT 252.8, E-value 4.8e-73" FT /inference="protein motif:Pfam:PF02424" FT sig_peptide complement(437677..437758) FT /locus_tag="CBO0377" FT /note="probabilty 0.996, with cleavage site probability FT 0.716 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature complement(437693..437725) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 438368..442561 FT /transl_table=11 FT /locus_tag="CBO0378" FT /product="putative cell Surface Protein" FT /note="Similar to Bacillus sphaericus surface-layer 125 kDa FT protein precursor SWALL:SLAP_BACSH (SWALL:P38537) (1176 aa) FT fasta scores: E(): 2.3e-17, 25.3 38d in 1308 aa,and to FT Clostridium difficile Cwp66 cwp66 SWALL:Q9F9G7 FT (EMBL:AF194870) (610 aa) fasta scores: E(): 5.3e-16,25.59 FT 38d in 547 aa" FT /db_xref="InterPro:IPR007253" FT /db_xref="UniProtKB/TrEMBL:A5HYS2" FT /protein_id="CAL81931.1" FT /translation="MNKKGTRALASATVVGLVLATVATGNVKAAPGDVNKVQGNDRYET FT AANVAKANWKDGAKDVIIASGEGYADSLSASVLAKKLNAPIILTTAGELNSNAKSALQT FT LKPENVYVIGGNASVSEAVRSGLKKDYKVTELGGKTRFETNLAVANHLVDKLGVKADNV FT MVVNGQDGFSDALSAAPVAAAKEQVLLIVGRDASTADAAANFVKKHNSKVTVIGTEGVV FT PAAVYNKLGASERVNGGADRFETNLNIMKHFKLNADTMYVANATGQGYADALVASALAG FT KSGAPLVLVDTKDSESTKNAIKYIADNKTDKTEVSTVGGSGVMPDEIVNEIETAVNPEL FT SAAEKAVKAYEDAKIGTSDEIAAAKALKADAVKAVDNVKDAAKKSAFEARIEAKDKAIK FT DAEAKMEVSVESVEAINLNQVKVVFTSPVDSDSAEDVTNYEIGGKKLTKDKDEDTDAIG FT VLQDDDRTVILTLADEQEQHDEVTVKVKKGVLSEDKTKNIKEYEKDVVFKDLDEPKVSK FT VSVKGNNKIVVEFSEAVLVNKVEGNDVDEKKEDAAKKLADKFELNGQSIQSLGYDKDNS FT EVKDTLIYGDKAYVNKVEFYFSSALDSGKNELKVLEGKKGDILYDAGNFIVKEAKFDIN FT VDKVTSSPKIKSVKGGTDGKIYIDFDRAMDTKTAEKIGNYVLNNGTGTLAGKAELKEND FT TQVKITLDNSSLIKTGSNTIEITDKVKDAYGNKVDKDTRLSFVAEKDEEKPEVVLVEAI FT DAETIRVRFNEDVKYKHAINESNYELRDSNGIRIDGDIKEIVAANGTEDDTDVYDIKMG FT KGKNLTGDKYTLKIKNIADTSDNVMDDYETEFKGEDDEAPTVKGVAQNGKKVIVRFSEK FT MDRTSLRKTENYRYIDSDDNDKVKELPSKTTITVASDDKTVTIEFPDSYEDKVGGLIVK FT SDVKDVAGNKMDADHKADGFKPLDAVQVKENSMKVSRADDDVEVELVFDAAVDKVYKEN FT FKFGKANKETIIADSVRINGDKVTFKFNDGANAKAIKACGSSLVVKTDTTGSDKPAAED FT KSGKEIKIEDPVQVYDNLIAPELDADEKDGYVGNTAWKVGVEGDKATITIAFDTQIANL FT KDAYLDDFKFMADNTGDELEVNKVEVEDGNTLKYTFDEDINKLKDVKVITVKADKDNID FT VRTEKDLAKNDQKYKPTNDDINGWKLKTGTAINDALKAKAETDLTKAIEEANAKKAGVE FT KSADGKDIEKTGKWVTEAEMTTFETAIKSATDAKESKDATAKSLNDAKTALDKAVEEFN FT KAIKDGTKEAAVNDTDSTLKTFAIAGEDVLALSNIDTTGAEKNFADFTGDKVKGIAVKA FT NSDKAKSVVVKVNNVVVDEADLATKVLAENDVITVVVTAEDSTKTTTYTVTVVK" FT sig_peptide 438368..438452 FT /locus_tag="CBO0378" FT /note="probabilty 1.000, with cleavage site probability FT 0.998 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 438482..438745 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 48.5, E-value 1.6e-11" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 438767..439054 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 36.6, E-value 5.8e-08" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 439067..439360 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 46.1, E-value 8.2e-11" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 439193..439216 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region complement(442831..442969) FT /note="intergenic repeat 1" FT CDS 443167..445236 FT /transl_table=11 FT /locus_tag="CBO0379" FT /product="putative cell Surface Protein" FT /note="Similar to Bacillus subtilis FT N-acetylmuramoyl-L-alanine amidase cwlb precursor lytc or FT cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) FT fasta scores: E(): 2.4e-29, 33.09 38d in 417 aa, and to FT Clostridium difficile Cwp66 cwp66 SWALL:Q9FA27 FT (EMBL:AF093106) (610 aa) fasta scores: E(): 1.1e-26,31.93 FT 38d in 501 aa" FT /db_xref="GOA:A5HYS3" FT /db_xref="InterPro:IPR007253" FT /db_xref="InterPro:IPR007280" FT /db_xref="UniProtKB/TrEMBL:A5HYS3" FT /protein_id="CAL81932.1" FT /translation="MVKSKEKNKIFFTLLAITLIFIVNSNKVKANDEINFKRLDGKGRY FT ETSSSICSGGWDTSEYAVLASGEGFADALSAAPLAKKYDAPIILTGKNKLNDNAKDQLK FT KLDTKEVIIVGGPGSISEDIVTELKDLGIKVNRIYGEDRYKTSLKIAKEIGVKNGVVVT FT NGLGFADALAMAPIAASKQMPILLTPSDKLTSDTMEFLKKNSYNKSYILGGTATVSDYI FT KNSLKNPTRLSGADRYQTNIAILNHFKEDLNLDEVYISSGDGYADALSGSVLASKNKSP FT IILINDNLNKSTKDFVSNNKSNFKNVIIFGGEGVVKEPTISSLFGAFRSGETRSDTKEV FT SAEKWDRSYLKDYHIELPESGKLDIEYDISNFTRFDLIVLDIKNNEIIKKSYNYLKNNK FT SIHDNYNDIRLPKGKYIVRVHAFNMDGTYTIKAKYTQEGEGFEKESNNDIKTANVLEPN FT KSIIGSIHSYNDVDYYKFTLNEKGSLKINLKHNQYGRYGFKVNLLDENNKSISQFISGG FT EDINSYSNKLRLPKGTYFVRIECEKWNDEPLQYELNLDYDIEGENYESEPNDYIQDANY FT IKCNKEYIGNIQSRDDRDYYKINLNSDSKITINFKHDEGYGKWTIYLYDKDNKPIQRFK FT SYGYEINKDFDPIELEAGEYYVSVEGRDSLDYTINVKREAPDKSNNENKKVKRR" FT sig_peptide 443167..443254 FT /locus_tag="CBO0379" FT /note="probabilty 1.000, with cleavage site probability FT 0.998 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature 443275..443547 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 53.5, E-value 4.9e-13" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 443572..443841 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 73.5, E-value 4.5e-19" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 443854..444135 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 60.8, E-value 3.2e-15" FT /inference="protein motif:Pfam:PF04122" FT CDS 445871..450772 FT /transl_table=11 FT /locus_tag="CBO0380" FT /product="putative cell surface protein" FT /note="Similar to Clostridium difficile Cwp66 SWALL:Q9F9G7 FT (EMBL:AF194870) (610 aa) fasta scores: E(): 1.4e-17,26.37 FT 38d in 565 aa, and to Bacillus subtilis FT N-acetylmuramoyl-L-alanine amidase CwlB precursor lytc or FT cwlb or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) FT fasta scores: E(): 5.8e-12, 27.72 38d in 339 aa" FT /db_xref="InterPro:IPR007253" FT /db_xref="UniProtKB/TrEMBL:A5HYS4" FT /protein_id="CAL81933.1" FT /translation="MNKKGTRVLASATAIGIVLTMLPSGNVKAAPGDVNKMPGKDRYET FT AANVATANWKEGAENVIIASGEGYADSLSASVLAKKLNAPIILTKSKELHKGAKEALKT FT LKAKNLHVIGGNASVSQSIRDDLKREGYALTELGGKTRFETNLAIANYLVEKHNVKADE FT ILVVNGKDGFSDALSAASVAAAKGQILLIVGKDPSTADLAAKFIEEHNSKVTVIGTEKV FT IPKTVYDKLGAKERVIGGANRFETNLNIMKHFKLNTDKLYVANATGDGYADALVASALA FT GRTTSQLILTHTKDSQETKNAIDYIKSIKNDKTEVGLVGGNSVIPEEVVDKIKEVVKEE FT STKNPGKPSRPSKPSKPTEPEKNKFEIIWSFADVDEDLDVNTTNGKDDAKHDYVYIKFN FT KPISVSGDSKGVLNTSNYKLNKMPLPKGTEIKPNIKGLDDADKVTDSITIVLPNEYLNG FT KNEPHIITISSYLESSTTGDVLTNGGDKILTWSSDGREIFNASFSAEKQIYLAEVTAKK FT DLTLRDNLINAEKALETAKAAIKSLNNKTSGKSALEERVNDVEKTVKNARIKFDEKTDF FT EFSNGRITKYIGNETDIVIPEAIRGEKVTAIEDSAFKNKNLTSVKIPKTVESIGMQAFA FT KNNLTSIELPESLKYMGNIAFMDNKLASVKIPKDLINIPTGAFSKNEISSVVISEGVIE FT IALSAFAENKLESVVIPSTVEFIRNKAFSGNQLKVVNIPSNVKDIGKDAFANNKNIKLV FT YYKLIEAIKRAESIKTEGKEADKVKVLKKAIEEGNKLNDKPNATLEEVNKVVESINNAI FT EALNKESSKTTIKQIKPLGIKNIDVDLGTTEANVKAKLPQKVTIVDSKDKEHNVDINWS FT ILKYDRNIAADYTATGTFKLPEGVLQSNPEIDLKVTLKVTVTPKGVENREWELKDFTFK FT GTAITGFSESGKEKFKKSKDLILPNTNESGEKINEIADKAFCSEFEIKGDSNESFKDKD FT KAKQDPKIGINSIIIPYTVKIIGKEAFRNNCLTDINIPKSVTTIKDLAFNNNKLKTLSI FT PDSVTELGNGAFTLNDIADLKLSKELKTIQAAFGYNNLVSVTIPEGVTRIEDMAFSDNK FT LAQVTLPTTLEYLSGFNNNNLKSINIPTSVTELGKKAFARNKISSVKIPSNVKKIGVSA FT FQNTWHDTFLTSIIIEDGVENIDEYAFSLNHLKDVNIPKSVKELAPNAFHKNLGYDGVV FT HLFTDNYNNPNNLKESKYQVIDPAKLTIKYISEDKTLKEEEIWKIEKEGEEKYLHIGDK FT AVEIAPEYEDNEYELENTDVRKVDLSYKENEFIVKCKKKDLVDKLTIKSIGDVAPVVVD FT FGTEQNVVMDKLSKNTYIVDSNGENHEVELNWTIKNYNGNVPGEYTAVAIFKLPQGISQ FT SEPETILEVQGRIIVKEDFENIQDSKWGVEDFNFEGTILAGFSDKGEERLKANKDLILP FT KANDKGEAITKVKNYAFAKNGLTSLAIPKGLSGLVIGTNAFEENQINTLYIPEGVKEID FT AYAFSKNKLKYVDFPGTLKKIGNHALADNQLVSVIFSEETNMIAIDRFSFANNKITSII FT LLNDVTKVNGEAFTGNQSCNSDGKVHIFTKSFDPNNCNQWFPDSQYHKIIPLNK" FT sig_peptide 445871..445955 FT /locus_tag="CBO0380" FT /note="probabilty 1.000, with cleavage site probability FT 0.999 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 445973..446248 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 47.9, E-value 2.4e-11" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 446273..446560 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 35.9, E-value 9.5e-08" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 446573..446866 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 46.3, E-value 7.1e-11" FT /inference="protein motif:Pfam:PF04122" FT CDS complement(450843..451277) FT /transl_table=11 FT /locus_tag="CBO0381" FT /product="putative exported protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYS5" FT /protein_id="CAL81934.1" FT /translation="MNKGKNKFIILGIIVVVLLGVFSYNQYQKKAKFIGTPLEPIYKIV FT KIQNFKEGTYEEYKELFANPNKAITKEQFEAYRNSNKSNDMFKYDGDSIKGIMKHMKSE FT EKGTDLYKVYYLKNVKDDNEKKDANYWMVVKENNKWVIKN" FT sig_peptide complement(451199..451277) FT /locus_tag="CBO0381" FT /note="probabilty 0.849, with cleavage site probability FT 0.317 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT CDS complement(451403..452434) FT /transl_table=11 FT /locus_tag="CBO0382" FT /product="putative membrane-associated acyltransferase" FT /note="Similar to Staphylococcus caprae IcaC SWALL:Q9AIQ5 FT (EMBL:AF246927) (357 aa) fasta scores: E(): 6.4e-13,25.71 FT 38d in 350 aa, and to Clostridium tetani conserved membrane FT protein ctc00459 SWALL:Q898I8 (EMBL:AE015937) (348 aa) FT fasta scores: E(): 2.2e-44, 36.91 38d in 344 aa" FT /db_xref="GOA:A5HYS6" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:A5HYS6" FT /protein_id="CAL81935.1" FT /translation="MGEVIKIKNKRIVSMDLLRALSTIAVILIHVTGTILYNSNNKSLT FT YNSSLVLNQLARFSVPAFIFLSGFGLALSYKKESKYLAYLGHRLKKVVPDYFVWYIVYI FT FLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFFLN FT MGIYILLRYPNIPKSISENLTRESVVSWIFYFVLGVYFCSNYDKIHIFIKKHRNKLLFL FT LLLSTYILLKDTFLCLRANNDLDYGTTFIRPSVMLFSIFFILYIMSFNFNNLSFKKIFY FT MISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFIIVFFTCFIGGLLISILINKFK FT KLL" FT misc_feature complement(451406..452401) FT /note="Pfam match to entry PF01757 FT Acyl_transf_3,Acyltransferase family, score -22.0, E-value FT 0.00024" FT /inference="protein motif:Pfam:PF01757" FT misc_feature complement(order(451436..451504,451532..451600, FT 451619..451687,451715..451783,451820..451873, FT 451916..451975,451994..452062,452090..452149, FT 452210..452269,452327..452386)) FT /note="10 probable transmembrane helices predicted for FT CBO0382 by TMHMM2.0 at aa 17-36, 56-75, 96-115, FT 125-147,154-173, 188-205, 218-240, 250-272, 279-301 and FT 311-333" FT /inference="protein motif:TMHMM:2.0" FT CDS 452865..454376 FT /transl_table=11 FT /locus_tag="CBO0383" FT /product="putative exported protein" FT /note="Similar to Thermoanaerobacter tengcongensis FT hypothetical protein Tte1561 SWALL:Q8R9P4 (EMBL:AE013112) FT (355 aa) fasta scores: E(): 3.2e-20, 37.09 38d in 248 aa" FT /db_xref="InterPro:IPR015943" FT /db_xref="UniProtKB/TrEMBL:A5HYS7" FT /protein_id="CAL81936.1" FT /translation="MKKARQILYLIILIFSLNVSNVLAADNIKKYPAPDVEKRSYSTTV FT TYNKYLYDNILNGLINLKDKVDTSAYSKNADEVFKVLEKVLDDHPEIFYFDYENCSFWS FT NGILELGYRGNKETINTMRQQLDTKVQSIINNVITKDMSELEKEMAIHDYIVLNTKYDE FT EALNGNISSELIFTSYGCLVNNFAVCDGYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWN FT IVRINGKNYQVDATWNDPVPDSGYVRYKYFNMSDADIAKDHHWVKSDFPACNDNSFKYL FT HKADYVVKDLDYIYYSNNEDDYNLYKMKIDGSNNQMLTEDRAVNLVYYNDYIYFSNYSD FT GGTLYKVKNDGTELEQILDNHVENLHYSNGYLTYHNEDLSKDERMKLEQIVYEVENKEK FT FNEIFSSYKDWGQAKEVPRNKIWKISFNRAVNSENLKDQVYVMDSSFNKVTDIDVNINE FT GKNIIITKKASYKRGGLYYLVISKPIKDTKGQEIKEPVVMRFKIY" FT sig_peptide 452865..452934 FT /locus_tag="CBO0383" FT /note="probabilty 0.998, with cleavage site probability FT 0.978 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT CDS 454773..455684 FT /transl_table=11 FT /locus_tag="CBO0384" FT /product="ABC transporter, solute-binding protein" FT /note="Similar to Methanosarcina mazei phosphate-binding FT protein mm2005 SWALL:Q8PVG0 (EMBL:AE013439) (302 aa) fasta FT scores: E(): 2.8e-18, 30.16 38d in 305 aa" FT /db_xref="GOA:A5HYS8" FT /db_xref="InterPro:IPR011862" FT /db_xref="InterPro:IPR024370" FT /db_xref="UniProtKB/TrEMBL:A5HYS8" FT /protein_id="CAL81937.1" FT /translation="MKKKLSVMLSVLLTSALLFTACGSKQTSNSNEESSKKESGKIMCI FT GSSTLAPVVSKAGDTLKSKHGTWKKMNDKLPDENIELAVSSGGSGAGVKAALEKTANFG FT LISREVSKDEKAKMKEYNEIKIGYDALTLSVNPQNPILKNKKGLTSEEIQKIFSGEAKT FT WKDVDPSLPANKIVLVVRDAGGGAAEVFQKAVMGDKKVSKDAVQAPSMGALTQKVIENK FT DAIGYASVGLVDQNKGKLTPMEVDGVAPTKENITSGKYKIARPLLLIKDGKLTGVEQTF FT VDFLKSEEGLKIIDESGFVSIK" FT sig_peptide 454773..454860 FT /locus_tag="CBO0384" FT /note="probabilty 1.000, with cleavage site probability FT 0.577 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature 454788..455648 FT /note="Pfam match to entry PF01547 SBP_bac_1, Bacterial FT extracellular solute-binding protein, score 16.8, E-value FT 0.02" FT /inference="protein motif:Pfam:PF01547" FT misc_feature 454806..454838 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 455879..456751 FT /transl_table=11 FT /locus_tag="CBO0385" FT /product="phosphate ABC transporter, permease protein" FT /note="Similar to Methanosarcina acetivorans phosphate ABC FT transporter, permease protein pstc or ma0888 SWALL:Q8TSB0 FT (EMBL:AE010753) (296 aa) fasta scores: E(): 4.7e-33,36.26 FT 38d in 284 aa" FT /db_xref="GOA:A5HYS9" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR011864" FT /db_xref="UniProtKB/TrEMBL:A5HYS9" FT /protein_id="CAL81938.1" FT /translation="MKILYKFWDKVFYYIIKFFTFLSIVILSLILIFILKESLGIFKNI FT SFIDFITKSTWEPLGESPKLSILSFIMSTIYVTFLAVIIALPIAIGTSIFLANIASERL FT RNILKPIIDMLSGIPSVIYGFIGLSVVVKFFERKLGVSSGECILSAAIVLAIMILPFII FT SNCTDTMIKVYDKYFIYSKSLGISKWYMMNNLIIPASKKAILASVILAVGRGMGETMAV FT MMVIGNSPLMPKLLGKGETIPSLIALEMGSAQVGSMHYNGLFASGLILMIMLFIINFIF FT YMLKKNMQQ" FT misc_feature order(455915..455983,456101..456169,456206..456274, FT 456317..456376,456488..456556,456662..456730) FT /note="6 probable transmembrane helices predicted for FT CBO0385 by TMHMM2.0 at aa 13-35, 75-97, 110-132, FT 147-166,204-226 and 262-284" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 456089..456748 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 59.9, E-value 5.7e-15" FT /inference="protein motif:Pfam:PF00528" FT CDS 456787..457617 FT /transl_table=11 FT /locus_tag="CBO0386" FT /product="ABC transporter, permease protein" FT /note="Similar to Vibrio parahaemolyticus phosphate ABC FT transporter, permease protein vpa1459 SWALL:Q87G58 FT (EMBL:AP005089) (287 aa) fasta scores: E(): 3.4e-30,38.54 FT 38d in 275 aa" FT /db_xref="GOA:A5HYT0" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR005672" FT /db_xref="UniProtKB/TrEMBL:A5HYT0" FT /protein_id="CAL81939.1" FT /translation="MKRSLKDILLLLWYFLSTFLVVFIVFFIIAYVFKNGIHTINKDFL FT LDNPKGMPLGKGGGIFPAIVGSLLLMFISSITASILGIATAVYLTLYNKNKKIDSIIHI FT IIHSISGIPSIVLGLFGYSFLVFSLDLGVSLLAGAITLSIMIFPYIEVVTEKAIEEVDK FT KLIVSSYSLGIDKTYTFFKIILPQCIEEIVSGIMLSGGFAMGATAPIMLTSAVISAPTP FT DSIMSPVMALSYHLYILISQGISMENAYGTAFVLMSILIILNFLSMLIVRRRRV" FT sig_peptide 456787..456886 FT /locus_tag="CBO0386" FT /note="probabilty 0.962, with cleavage site probability FT 0.605 between residues 34 and 35" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(456811..456879,456991..457059,457096..457164, FT 457177..457245,457369..457437,457531..457599) FT /note="6 probable transmembrane helices predicted for FT CBO0386 by TMHMM2.0 at aa 9-31, 69-91, 104-126, FT 131-153,195-217 and 249-271" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 456976..457614 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 67.2, E-value 3.6e-17" FT /inference="protein motif:Pfam:PF00528" FT CDS 457619..458365 FT /transl_table=11 FT /locus_tag="CBO0387" FT /product="ABC transporter, ATP-binding protein" FT /note="Similar to Clostridium tetani phosphate import FT ATP-binding protein PstB or ctc01135 SWALL:Q895Y0 FT (EMBL:AE015939) (249 aa) fasta scores: E(): 1.8e-43,53.01 FT 38d in 249 aa" FT /db_xref="GOA:A5HYT1" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005670" FT /db_xref="InterPro:IPR015850" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HYT1" FT /protein_id="CAL81940.1" FT /translation="MNILETNNLNVYLDKNHILKNLNLNIEKNKVTAIIGPSGCGKSTL FT LRTLNGIIKEEINFNIEGDIYFNGENTESIPLEFLRRKIGCVFQSPAPFPFSIYKNFNY FT VLKYYGIKDKSKVNKIIEEKLKLVGLYDEVQDNLNISALKLSGGQQQRLCIGRALLPEP FT EILLMDEPCSALDIKNTAIIEKLLLELKKKYTILIVTHNLAQAKRISDSTIFMLNGEVI FT ESGKTEKVFNSPQNEETKNYISGIYG" FT misc_feature 457703..458275 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 192.6, E-value 6.4e-55" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 457724..457747 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 458051..458095 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 458491..458961 FT /transl_table=11 FT /locus_tag="CBO0388" FT /product="conserved hypothetical protein" FT /note="Similar to Methanopyrus kandleri had family FT hydrolase, a mk0529 SWALL:Q8TXY0 (EMBL:AE010347) (158 aa) FT fasta scores: E(): 4.9e-13, 35.03 38d in 157 aa" FT /db_xref="InterPro:IPR013200" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:A5HYT2" FT /protein_id="CAL81941.1" FT /translation="MIFVEIPGRDNLNIKNIVFDYNGTVAEDGIMSLDTKENLKKISEK FT LKVYIITADTYGNVKKQCEGLPVSIETFPKGNATFYKKSFVEKLGPGETMVIGNGMNDI FT EMFKVATLSIAVIGEEGCAGKLIVQSDIVVSSIEKVFFMIENTNRIVATLRD" FT CDS 459448..460899 FT /transl_table=11 FT /locus_tag="CBO0389" FT /product="putative amino acid permease" FT /note="Similar to Oceanobacillus iheyensis cationic amino FT acid transporter ob0489 SWALL:Q8ESX7 (EMBL:AP004594) (469 FT aa) fasta scores: E(): 1.8e-96, 51.68 38d in 476 aa" FT /db_xref="GOA:A5HYT3" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:A5HYT3" FT /protein_id="CAL81942.1" FT /translation="MSKENDVSSSDQNFERVLSKKDIMALAFGAMIGWGWVVLTGPWIQ FT KAGSMGAILAFIIGGIVVLFVGLTYAELTSAMPKCGGDLVFSYRALGKKAAFICTWGII FT LGYISVVAFEAVAFPSVLENLFSFSYLKGYMYTIAGYDIYASWALIGSISAIIITIVNY FT FGAKPAAFMQTVVTVMIACVGIALFTGSLFNGSVQNMSPMFVTGTSGKGILAVAIMTPF FT MYVGFDVIPQAAEEINVPFKKIGKILILSVIMAVVWYAMIIYSTSVALNSNEINSSSLV FT AADAMKKMFGNSVAASKILILAGIGGILTSWNSFFMGGSRAIYSMAEAGMLPKFLAKIH FT PKYKTPTNAIVLIGLVSSIAPFFGEKMLVWLSNAGGFGILISYLLVSISFLVLRKKEPN FT MERPYKVKHPKFVGTMAIVLCIGMLLMFMPGLPSGLSWPYEWGIILAWFLLGGIFYLAA FT ANKDFNESKRTKYKDDYYTNKKVSV" FT misc_feature 459511..460851 FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 60.6, E-value 3.5e-15" FT /inference="protein motif:Pfam:PF00324" FT misc_feature order(459514..459582,459592..459660,459733..459801, FT 459874..459942,459955..460023,460081..460149, FT 460186..460254,460327..460395,460486..460539, FT 460552..460620,460678..460746,460756..460824) FT /note="12 probable transmembrane helices predicted for FT CBO0389 by TMHMM2.0 at aa 23-45, 49-71, 96-118, FT 143-165,170-192, 212-234, 247-269, 294-316, 347-364, FT 369-391,411-433 and 437-459" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(460965..461546) FT /transl_table=11 FT /locus_tag="CBO0390" FT /product="putative forespore-specific lipoprotein" FT /note="Similar to Bacillus subtilis lipoprotein yhcn FT precursor yhcn or bsu09150 SWALL:YHCN_BACSU (SWALL:P54598) FT (189 aa) fasta scores: E(): 2e-08, 27.89 38d in 190 aa" FT /db_xref="InterPro:IPR014247" FT /db_xref="InterPro:IPR019076" FT /db_xref="UniProtKB/TrEMBL:A5HYT4" FT /protein_id="CAL81943.1" FT /translation="MIKNNKKLLFTTGLLSLSLLLGTGCTNKSAKNPPANNATKNVTEK FT ANENTANKNAANGNATNENAKDGTSTGENINGNTTVTDGDLSRRSQKIADELVKIKGIE FT KARVVISERRALVGVTIPNSVEGKMTSDLKKKVDETVKKTDKEIDTVAVSADADVYDRI FT TKIADGIKGGRGIQEFGTEFKELFNRIIPQ" FT sig_peptide complement(461450..461546) FT /locus_tag="CBO0390" FT /note="probabilty 1.000, with cleavage site probability FT 0.521 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature complement(461472..461504) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 461735..462559 FT /transl_table=11 FT /locus_tag="CBO0391" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00525 SWALL:Q898D7 (EMBL:AE015937) (279 aa) fasta FT scores: E(): 5.4e-39, 47.6 38d in 250 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYT5" FT /protein_id="CAL81944.1" FT /translation="MKHQKEFNREEALDIKLSLLEKDQDVMSKVQKEILEEELDELVPI FT KEGEINVAGIYAYDLGDKYEVKAYLRNGIEKQINFEEIPFKIINSKGELLASQTFDLKS FT MGNIPSYCARPCVLYFDKKNVFVDKIPVDDWKLVFDNSLKAVRNLMVDIENLPEGIDAK FT SKKVYTDFLEGLSDLKEGEVSFSKFSIGINENGHLLVTIVVRNGCNKGINIEKLPMTIR FT DEKGNFVVSEVFELKDLKVSPMKAKVCNFAFPLQIKEKAVIPLDSWKIEYNI" FT repeat_region 462573..462602 FT /rpt_family="CB.6" FT /rpt_type=INVERTED FT /rpt_unit_seq="gtgtctcaaaattaaatctatttttagaca" FT /inference="ab initio prediction:REPuter" FT CDS 462637..463332 FT /transl_table=11 FT /locus_tag="CBO0392" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus anthracis hypothetical protein FT ba0337 SWALL:Q81ZD2 (EMBL:AE017025) (235 aa) fasta scores: FT E(): 3e-22, 31.35 38d in 236 aa" FT /db_xref="InterPro:IPR002725" FT /db_xref="UniProtKB/TrEMBL:A5HYT6" FT /protein_id="CAL81945.1" FT /translation="MKDIILMGERFQYILKTKKRKTISIKIGKEFIIEVTAPLGTNEYT FT IEQVLKKEEKWIIKKIKKLKEVENFNGYYYLGELYYLKIKEVKSLYFKLEVDSNKFMVY FT INSGVLKEKREVIIKDNLEKFYKEQAVKVLKERTDYYSSILKVAPKNIVVKNQKTLWGS FT CSSKGNINYNYKIVMAPLKILDYIVVHELCHLVHMNHSKDFWHLVESIIPDFKERRNWL FT KENGYKLKI" FT misc_feature 462670..463326 FT /note="Pfam match to entry PF01863 DUF45, Protein of FT unknown function DUF45, score 110.1, E-value 4.6e-30" FT /inference="protein motif:Pfam:PF01863" FT misc_feature 463195..463224 FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS 463419..463757 FT /transl_table=11 FT /locus_tag="CBO0393" FT /product="single-strand binding protein" FT /note="Similar to Clostridium acetobutylicum single-strand FT binding protein 1 Ssb1 or cac0945 SWALL:Q97KH4 FT (EMBL:AE007610) (110 aa) fasta scores: E(): 2.3e-17,47.66 FT 38d in 107 aa" FT /db_xref="GOA:A5HYT7" FT /db_xref="InterPro:IPR000424" FT /db_xref="InterPro:IPR011344" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:A5HYT7" FT /protein_id="CAL81946.1" FT /translation="MNRVMLIGRLTKDAELKQIEDRDVSLLRFVIAVNRYYNKENSKTD FT YIPIVVWGRHAEAIHKYMKKGKLISVVGRIQARNYEDKNGNKKYGIEIVSNEIKFLDPK FT KIDKVVSN" FT misc_feature 463419..463457 FT /note="PS00735 Single-strand binding protein family FT signature 1." FT /inference="protein motif:ProSite:PS00735" FT misc_feature 463419..463724 FT /note="Pfam match to entry PF00436 SSB, Single-strand FT binding protein family, score 125.9, E-value 7.7e-35" FT /inference="protein motif:Pfam:PF00436" FT CDS 464010..464561 FT /transl_table=11 FT /locus_tag="CBO0394" FT /product="putative membrane protein" FT /note="Similar to Clostridium acetobutylicum predicted FT membrane protein cac0950 SWALL:Q97KG9 (EMBL:AE007610) (183 FT aa) fasta scores: E(): 2.9e-32, 49.72 38d in 183 aa" FT /db_xref="GOA:A5HYT8" FT /db_xref="InterPro:IPR003810" FT /db_xref="InterPro:IPR022929" FT /db_xref="UniProtKB/Swiss-Prot:A5HYT8" FT /protein_id="CAL81947.1" FT /translation="MEVQELFLLALAISLDAFGVILCIGINKGITLKSSMIFVFSFGFF FT QFFLSFLGGYIGTIFNKYIVPIPTIVGGLIIIIVGILMITEGFKEKEESIFLNKIMYLI FT LGVSVSIDALVIGFTTLSYINNLFYLFMSSLFMGLIATIICSLGIILSKYIKKISIISS FT YADYIGGIILILFGLKMLFF" FT misc_feature order(464028..464087,464115..464183,464196..464264, FT 464307..464372,464391..464459,464487..464555) FT /note="6 probable transmembrane helices predicted for FT CBO0394 by TMHMM2.0 at aa 7-26, 36-58, 63-85, FT 100-121,128-150 and 160-182" FT /inference="protein motif:TMHMM:2.0" FT CDS 464643..465059 FT /transl_table=11 FT /locus_tag="CBO0395" FT /product="putative ferric uptake regulation protein" FT /note="Similar to Campylobacter jejuni ferric uptake FT regulation protein Fur or cj0400 SWALL:FUR_CAMJE FT (SWALL:P48796) (157 aa) fasta scores: E(): 3.3e-08, 27.69 FT id in 130 aa, and to Bacillus subtilis peroxide operon FT regulator PerR or bsu08730 SWALL:PERR_BACSU (SWALL:P71086) FT (145 aa) fasta scores: E(): 4.8e-08, 30.76 38d in 130 aa" FT /db_xref="GOA:A5HYT9" FT /db_xref="InterPro:IPR002481" FT /db_xref="UniProtKB/TrEMBL:A5HYT9" FT /protein_id="CAL81948.1" FT /translation="MKKNNLKLTKGRINILSILIEATYSLDVESIFKKLKEKNVNLDLS FT TIYRTLEVFENKDLIEKFDLGNSKYNFRFKRKKHTHTIQCKVCHKEVQIECPLFHLDEI FT VNKETGFSNIDHHLKIEGVCENCVKYNCIKEKKH" FT misc_feature 464649..465005 FT /note="Pfam match to entry PF01475 FUR, Ferric uptake FT regulator family, score 43.0, E-value 7.1e-10" FT /inference="protein motif:Pfam:PF01475" FT misc_feature 464895..464912 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT /inference="protein motif:ProSite:PS00190" FT CDS complement(465056..465403) FT /transl_table=11 FT /locus_tag="CBO0396" FT /product="putative exported protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein Cac0952 SWALL:Q97KG7 (EMBL:AE007610) (114 aa) fasta FT scores: E(): 1.3e-08, 32.99 38d in 97 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYU0" FT /protein_id="CAL81949.1" FT /translation="MKKKLILIICILFLLFLPLSYKYKIYKNKDLNYVVEQHMTHGLFN FT KYKMHSINSLNLTFSDGNIAVVKVYGTSNSSPHKSISYNLFLTKSKNGAWKVKKTSENY FT NYSKEKTPDAP" FT sig_peptide complement(465337..465403) FT /locus_tag="CBO0396" FT /note="probabilty 0.871, with cleavage site probability FT 0.629 between residues 21 and 22" FT /inference="protein motif:SignalP:2.0" FT CDS 465674..466732 FT /transl_table=11 FT /locus_tag="CBO0397" FT /product="putative metal dependent phosphohydrolase" FT /note="Similar to Clostridium tetani conserved protein FT ctc00529 SWALL:Q898D3 (EMBL:AE015937) (357 aa) fasta FT scores: E(): 7.6e-85, 63.17 38d in 353 aa" FT /db_xref="GOA:A5HYU1" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR006675" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5HYU1" FT /protein_id="CAL81950.1" FT /translation="MIMRLEFINRVKENDVLGRNIFSEDGQVLLKSGIKLTGNYIKKLK FT NLGVFYIYIRDERLEDVVIDDPKLMELKQTTMKSMTDLMKNIHDFNGKSLKRSFNQVEE FT MIDYIIDMGDVNRSLYDIKTYDNYTYIHSLDTCIMTTFIGLSSGLNEKELKDVGIGAIL FT HDIGKTRISNKIINKKGPLTDDEFIEIKKHPIYGSEILKKDFTMSDTIIKIVEQHHERI FT DGKGYPYGLKRNDISKYAKLVSICDVYDAISNDRCYRKKFTPNDAYELILSGSGTMFDE FT NLVKSFKNTFAIYPLGCRIRLSNGEEGYVINQNKGFPDRPIIRIFRDSNMKRFGEINLL FT KSPNLVIRSLVM" FT misc_feature 466058..466429 FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 92.5, E-value 8.6e-25" FT /inference="protein motif:Pfam:PF01966" FT CDS 466869..467882 FT /transl_table=11 FT /locus_tag="CBO0398" FT /product="putative membrane associated peptidase" FT /note="Similar to Clostridium tetani conserved membrane FT protein ctc00530 SWALL:Q898D2 (EMBL:AE015937) (345 aa) FT fasta scores: E(): 3.5e-47, 48.22 38d in 338 aa" FT /db_xref="GOA:A5HYU2" FT /db_xref="InterPro:IPR002610" FT /db_xref="InterPro:IPR022764" FT /db_xref="UniProtKB/TrEMBL:A5HYU2" FT /protein_id="CAL81951.1" FT /translation="MIGIDNFIKDIIEKLMSTNNYNVMEINTNTGLESNWIAVKDKEDF FT YNVLIFSSNFAIKNLDKEYIEEYIKSLFVDKPINLNIAILMDEEIDDSFINSLDSNLIK FT DISFIVDYNNRNIVYAGEGTRSIVEDIVSVPEQRENIYYNENDANSNKKATITKIIIGI FT NIFMYLITAFLSGSIFTSDIKVLIFLGAKVNSFINNGEYYRLITAMFLHGGLIHLALNM FT YALNAIGPLVEIYFGKVKYLIIYFISGVLSSYFSYLFSSSVSIGASGAIFGILGATLII FT AYTNRKKGGKEFLNNIISVIVVNLILGFSIPNVDNFGHIGGLIGGVIITLVLFFIR" FT misc_feature order(467343..467411,467484..467552,467589..467642, FT 467652..467720,467745..467804,467817..467876) FT /note="6 probable transmembrane helices predicted for FT CBO0398 by TMHMM2.0 at aa 159-181, 206-228, FT 241-258,262-284, 293-312 and 317-336" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 467460..467879 FT /note="Pfam match to entry PF01694 Rhomboid, Rhomboid FT family, score 169.1, E-value 7.5e-48" FT /inference="protein motif:Pfam:PF01694" FT repeat_region 467867..467910 FT /rpt_family="CB.846" FT /rpt_type=DIRECT FT /rpt_unit_seq="tttttttatccgatgactacccgctctaatactcccatcttctt FT " FT /inference="ab initio prediction:REPuter" FT repeat_region 467879..467900 FT CDS complement(468193..470247) FT /transl_table=11 FT /locus_tag="CBO0399" FT /product="methyl-accepting chemotaxis protein" FT /note="Similar to Bacillus subtilis methyl-accepting FT chemotaxis protein TlpB or bsu31230 SWALL:TLPB_BACSU FT (SWALL:P39217) (662 aa) fasta scores: E(): 2.6e-40, 31.81 FT id in 682 aa" FT /db_xref="GOA:A5HYU3" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR004010" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:A5HYU3" FT /protein_id="CAL81952.1" FT /translation="MKLNFKSIKNLILCTILPLTILSMVFLSILSYSNSKNIISNEIED FT KMKFQTKAISENIEKSLLSHKKIAETLSKTVESSKDIMPKDTYKNIVGNFIKTNDETFG FT TGIWFEPYKFNAKEKFFGPYCFKDGNKIVYTDKYSTESYNYMNYDWYKSAKSSTASCVW FT SKPYLDELSNITMVSTSAAFKDKSGNFLGVATADINLDRLQKMIANVKFGKTGKAILLD FT KDGNYITNPNKSKIVKMNITKETENSLSTLGKEMLSNKKGTGTYKDGEVKKLVYYDSIP FT ETGWIIALSIDQSEVTAPLKQLLIKSIAFILIALALIIIFILWFSNYLTKNINRVNIFS FT ETISNGDLTKSLSIDSKDELGAMGKNLNSMKNTLNNIINNFNISLKDIVSISEELSASA FT EQTESASDQIAQSISDIATGSETQSKTSQDSVKNLEEIYKGMEQISDNVQSVTNYSMAT FT YKKAEEGNITVSTAINKMKDIEESVIDSANIVNTLEEKSNNIDNIVSLITSISEQTNLL FT ALNAAIEAARAGEAGKGFAVVAEEVRKLAEESSASAGSIGYIIKEVQSDITKVVNSMKI FT ETNNVNEGIVIVQNTKSSFENILSSIDKVSREMQDVSAVVEEITASTETVVNSLEKIDS FT IIKESSSNTQNVAASAEEQTAIMKEVAEVATKLSQMSLKLEKDINIFKI" FT misc_feature complement(468196..469059) FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 248.0, E-value 1.4e-71" FT /inference="protein motif:Pfam:PF00015" FT misc_feature complement(469120..469329) FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 50.6, E-value 3.6e-12" FT /inference="protein motif:Pfam:PF00672" FT misc_feature complement(order(469273..469341,470152..470220)) FT /note="2 probable transmembrane helices predicted for FT CBO0399 by TMHMM2.0 at aa 10-32 and 303-325" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(469519..469761) FT /note="Pfam match to entry PF02743 Cache, Cache FT domain,score 54.7, E-value 2.1e-13" FT /inference="protein motif:Pfam:PF02743" FT misc_feature complement(469603..469626) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT sig_peptide complement(470145..470247) FT /locus_tag="CBO0399" FT /note="probabilty 1.000, with cleavage site probability FT 0.488 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT repeat_region complement(470682..470722) FT CDS complement(470844..472574) FT /transl_table=11 FT /gene="ftsH" FT /locus_tag="CBO0400" FT /product="cell division protein" FT /EC_number="3.4.24.-" FT /note="Similar to Escherichia coli, and Shigella flexneri FT cell division protein FtsH hflb or ftsh or MrsC or TolZ or FT b3178 or sf3218 or s3436 SWALL:FTSH_ECOLI (SWALL:P28691) FT (644 aa) fasta scores: E(): 8.6e-61, 38.8 38d in 585 aa" FT /db_xref="GOA:A5HYU4" FT /db_xref="InterPro:IPR000642" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR003960" FT /db_xref="InterPro:IPR005936" FT /db_xref="UniProtKB/TrEMBL:A5HYU4" FT /protein_id="CAL81953.1" FT /translation="MNKIKNKIIILPLLTAFLSIAVMISLNFYSSKKTNKDYNEFLKDL FT NAKKISTVYMTDTSTIKIKLNSNEIYETDNPRSINFKEDLLKKGVKISENSPMTPKEVI FT PLSFLVLSVISIAFIGLKDSTIFKNKKLSSVDSLDADEVENIKLNFNSVAGNEEAKESV FT KDIVDFLKNPEKYSSYGARMPKGIILYGDPGTGKTLMAKAVAGEAGVPFYAMSGSDFVQ FT VYVGVGASRIRQLFKKARSKGKAVIFIDEIDAIGKKRSSEKAGGSEERDQTLNALLTEM FT SGFNEKEGIIIMAATNRLDILDEALLRPGRFDRHIEVNLPDVVAREKILNLHLKNKPIG FT NINIKDWAKKTAYFSGAKIENLLNEAAILACKENSVKIEDYHVDKAFSVVLAGYEKQNR FT DYIKNKDKKITAYHEIGHALISSIVLPKEKISKVTIIPSTKGAGGYTLSIPEDSLYQSK FT EYLRNRIMVLLGGRAAEEIIFGENHITTGAHNDLQRSTSIAYKMVTEYGMGETLGLLNM FT GSLKHELSINENDIIKECKSLIDNIYKDVKNTLLKEKDQLDSLSEKLLEKETLYEEDFK FT " FT misc_feature complement(470847..471443) FT /note="Pfam match to entry PF01434 Peptidase_M41,Peptidase FT family M41, score 183.2, E-value 4.3e-52" FT /inference="protein motif:Pfam:PF01434" FT misc_feature complement(471318..471347) FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT misc_feature complement(471459..472019) FT /note="Pfam match to entry PF00004 AAA, ATPase family FT associated with various cellular activities (AAA), score FT 280.1, E-value 2.9e-81" FT /inference="protein motif:Pfam:PF00004" FT misc_feature complement(471651..471707) FT /note="PS00674 AAA-protein family signature." FT /inference="protein motif:ProSite:PS00674" FT misc_feature complement(471981..472004) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(order(472212..472268,472488..472556)) FT /note="2 probable transmembrane helices predicted for FT CBO0400 by TMHMM2.0 at aa 7-29 and 103-121" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(472481..472574) FT /gene="ftsH" FT /locus_tag="CBO0400" FT /note="probabilty 0.999, with cleavage site probability FT 0.680 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS 472794..473849 FT /transl_table=11 FT /locus_tag="CBO0401" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1451 SWALL:Q8XKE9 (EMBL:AP003190) (323 aa) fasta FT scores: E(): 1.4e-30, 32.08 38d in 321 aa" FT /db_xref="InterPro:IPR010652" FT /db_xref="UniProtKB/TrEMBL:A5HYU5" FT /protein_id="CAL81954.1" FT /translation="MKVSSVKVTLTEIDIMTLIKDYLKVPGLHIESIYLGDIIEVKGSY FT TKGISIPFFAKLALGSVNNNTINIRIFKIKVMKLHIIDAIKKLALKLSLSNFKDYGIYV FT KKENIKIDLDILSKKIPYTYFKIEKLNLYNGYVDVFVDNIVYAKENEKEEKEVKQEKFS FT SNKKYKPIYKRKDNYSLTRKNLKIKLPNKYNKFFEYSMLIPDITVLLYRLLKDKRVDVK FT TKTLVVSVLSYIVSPVDIIPSFIPFIGQIDDFAVVFFGLNKIIEEVPEEIILENWEGQG FT NIIFLVKQVIGYISNIIGTENVKTLMKFANNIVGFIKEKYDGKSNLKAHKQENKAYEEV FT ASVDEKSNNIH" FT CDS 473824..474273 FT /transl_table=11 FT /gene="rnhA" FT /gene_synonym="rnh" FT /locus_tag="CBO0402" FT /product="ribonuclease Hi" FT /EC_number="3.1.26.4" FT /note="Similar to Salmonella typhimurium, and Salmonella FT typhi ribonuclease Hi RnhA or Rnh or stm0263 or sty0284 or FT t2602 SWALL:RNH_SALTY (SWALL:P23329) (155 aa) fasta scores: FT E(): 7e-22, 48.25 38d in 143 aa" FT /db_xref="GOA:A5HYU6" FT /db_xref="InterPro:IPR002156" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR022892" FT /db_xref="UniProtKB/Swiss-Prot:A5HYU6" FT /protein_id="CAL81955.1" FT /translation="MKKVIIYTDGACRGNGQENTIGAYGIVLMYGEHKKEIKKAFRDTT FT NNIMELSAVVEALSLLKEPCSIELYSDSAYVINAINQKWLDNWKKNNWKTASKSPVKNK FT ELWEKLDELLKKHSVKFIKVKGHSDNEYNNRCDKLANEAMDEFNV" FT misc_feature 473824..474258 FT /note="Pfam match to entry PF00075 rnaseH, RNase H, score FT 180.8, E-value 2.3e-51" FT /inference="protein motif:Pfam:PF00075" FT CDS 474336..474512 FT /transl_table=11 FT /locus_tag="CBO0403" FT /product="putative exported protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1449 SWALL:Q8XKF1 (EMBL:AP003190) (53 aa) fasta FT scores: E(): 0.0001, 45.28 38d in 53 aa" FT /db_xref="InterPro:IPR024623" FT /db_xref="UniProtKB/TrEMBL:A5HYU7" FT /protein_id="CAL81956.1" FT /translation="MNNRFLSGIAAGAILGATAGMLIVPQLDRGTRRRIKRTSRTMMGM FT AGNMMGNMRGIMR" FT sig_peptide 474336..474420 FT /locus_tag="CBO0403" FT /note="probabilty 0.931, with cleavage site probability FT 0.403 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 474348..474416 FT /note="1 probable transmembrane helix predicted for CBO0403 FT by TMHMM2.0 at aa 5-27" FT /inference="protein motif:TMHMM:2.0" FT CDS 474693..475997 FT /transl_table=11 FT /locus_tag="CBO0404" FT /product="putative transcriptional regulator" FT /note="Similar to Bacillus stearothermophilus FT transcriptional activator NprA SWALL:NPRA_BACST FT (SWALL:P43130) (406 aa) fasta scores: E(): 5.8e-06, 19.61 FT id in 413 aa, and to Bacillus subtilis response regulator FT aspartate phosphatase A RapA or GsiaA or spo0l or bsu12430 FT SWALL:RAPA_BACSU (SWALL:Q00828) (378 aa) fasta scores: E(): FT 0.0019, 21.46 38d in 368 aa" FT /db_xref="GOA:A5HYU8" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5HYU8" FT /protein_id="CAL81957.1" FT /translation="MEILSLGEKIKRRRKELNMTLKDLAGDRITPGQISLVESGKSNPS FT MDLLEYLAETLNTSIEYFMESEDTQAEKICKYYENIAESHIINDNLNIAEQYIEKSLYY FT AEKYNLEYRKARNLYLRGLIYMHKGDLPVAQQYLLSSNVIFIKNNNYEEIVNTFVNLGK FT ITIFLKAYHSSCSYFQQAEKVYSDHDIGNDDLLAEIYYHIAYTYFKLDNINKAIDYSYL FT AKEKYRQLNNKKEYANSLLLLSQQYSEKGEMDRAIKYSEKALNIFKEVDDVLYTSKIEN FT NLGKLFYEFDNLEESFIHFNRAKEIRESNKDPLLLETLINICENYIKQKDIHNCKLILD FT EIMNNLENGNEIALVDYYLLRHRVELLQGDLEEAESTLLMALNFVKNMQDKERIGEISI FT IIGKFYIDNGNDKEAAKYLNEGVEMFKEVGLLKDM" FT misc_feature 474720..474881 FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 42.7, E-value 8.9e-10" FT /inference="protein motif:Pfam:PF01381" FT misc_feature 474915..475016 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 2.9, E-value 1.7" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 475281..475382 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 11.6, E-value 0.16" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 475401..475502 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 6.4, E-value 0.66" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 475521..475622 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 13.6, E-value 0.091" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 475875..475976 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 1.6, E-value 2.4" FT /inference="protein motif:Pfam:PF00515" FT CDS 476029..477282 FT /transl_table=11 FT /locus_tag="CBO0405" FT /product="putative transcriptional regulator" FT /note="Similar to Bacillus thuringiensis transcriptional FT activator NprR nprR SWALL:Q9AQ53 (EMBL:AF220563) (425 aa) FT fasta scores: E(): 0.00056, 21.33 38d in 436 aa, and to FT Bacillus subtilis response regulator aspartate phosphatase FT B RapB or SpoOP or bsu36690 SWALL:RAPB_BACSU (SWALL:P70962) FT (377 aa) fasta scores: E(): 0.014, 20.15 id in 377 aa" FT /db_xref="GOA:A5HYU9" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5HYU9" FT /protein_id="CAL81958.1" FT /translation="MEILSVGQKIKRARVYKGYTLKELCGDIISVSKMSCIENDKIKPD FT DEILKIISEELEIDIKYLKAGVKEQLLDNIDKLKDNKNSSDYEKILEYNLKYAEEYKYY FT HIAFYIIHMLFNYYLENSEIEKLQLIISKYYDYWLKSGIDDNKIIYYMDIAKFFFETKE FT YIEAASYYRSIRKIAHEKNNYILLSEATYDEAACYIKIKEFDKAYEIAVSLIDLIDFLD FT NNIKKAEVYKILAILSLRLDRKKFENYEEKSYVLYGNDLIHKADATFKYATAMFDIGEK FT DKGISYINKALDLYPKNNTRAFVSFMLDTMKVLLKNDVLYRAQEISDEILNYAIKINNI FT RFIEKAYYYKAIILEKQGSLDTAEMYMNLSLDSILKFGTKQEIYERYMKMGNMYHKMNQ FT VGESIKYFNLAIKLSKKL" FT misc_feature 476470..476571 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 2.6, E-value 1.8" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 476821..476922 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 8.5, E-value 0.36" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 477058..477159 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 1.2, E-value 2.7" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 477178..477279 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 20.8, E-value 0.0035" FT /inference="protein motif:Pfam:PF00515" FT repeat_region complement(477365..477517) FT CDS 477596..477733 FT /transl_table=11 FT /locus_tag="CBO0406" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYV0" FT /protein_id="CAL81959.1" FT /translation="MVLLFLIITVIFKEIQGLKYFINRNKEMDKKLDIIISKLENKQNN FT " FT CDS 477764..478369 FT /transl_table=11 FT /locus_tag="CBO0407" FT /product="putative hydratase" FT /note="Similar to Pseudomonas putida isonitrile hydratase FT InhA SWALL:Q8G9F9 (EMBL:AB088117) (228 aa) fasta scores: FT E(): 1.4e-14, 30.27 38d in 185 aa, and to Pseudomonas FT aurantiaca DarS SWALL:Q84H27 (EMBL:AY135187) (228 aa) fasta FT scores: E(): 1.5e-13, 29.03 38d in 186 aa" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:A5HYV1" FT /protein_id="CAL81960.1" FT /translation="MRYRVDILLFDKFETLDVFGPVEILGSVPDTFKLNFISLKGGIVE FT SSQNVRIDTNLYTNEKNIEKILLVPGGIGTREKVDDNNFINFIENISNQSKYIISICTG FT SALLAKTGILNGKKATTNKLAFKWVTEQGKDVLWVKESRWVKDGSIYTSSGVSAGMDMA FT LGFIADIIGKTKALEISQRIEYFWNEDSKYDPFSKMYE" FT misc_feature 477860..478276 FT /note="Pfam match to entry PF01965 DJ-1_PfpI, DJ-1/PfpI FT family, score 38.6, E-value 1.5e-08" FT /inference="protein motif:Pfam:PF01965" FT CDS 478574..479500 FT /transl_table=11 FT /locus_tag="CBO0408" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc02189 SWALL:Q892B6 (EMBL:AE015943) (314 aa) fasta FT scores: E(): 1.3e-78, 69.8 38d in 308 aa" FT /db_xref="InterPro:IPR021328" FT /db_xref="UniProtKB/TrEMBL:A5HYV2" FT /protein_id="CAL81961.1" FT /translation="MLSRREFIRQSLELHLFFGRIMKEHSFFLQIGFTPKDSRLMQQAN FT AFRMEFDRLLADAIYLSNGVVSNSVLKSGEVVTPFTLKAEMASAYFTGVNIPIRLTEVE FT TGLMGDSSTKVNPMLEEKVSMLNQRAMGLTRALAQFKTKILSDVICCRIFTVNYPLLID FT HILREAKFYFQLVRRLQNREEINLEKEAYEQETFWNRIMAEHSKFIRGLLDPTEDELIK FT TANNFANEFDELTEEAKEAMDNAMAISKVTDDSLKATIEIKKFKAQGTQGLVECKIKSI FT IIPLLGDHTLREANHYLRLLKIFEKSE" FT CDS 479864..482464 FT /transl_table=11 FT /gene="clpB" FT /gene_synonym="htpM" FT /locus_tag="CBO0409" FT /product="heat shock protein" FT /note="Similar to Escherichia coli, Escherichia coli O6,and FT Escherichia coli O157:H7 ClpB protein ClpB or HtpM or b2592 FT or c3114 or z3886 or ecs3455 SWALL:CLPB_ECOLI FT (SWALL:P03815) (857 aa) fasta scores: E(): 5.3e-137,51.74 FT 38d in 862 aa, and to Synechococcus sp. ClpB protein clpB FT SWALL:CLPB_SYNP7 (SWALL:P53533) (883 aa) fasta scores: E(): FT 6.9e-152, 58.66 38d in 866 aa" FT /db_xref="GOA:A5HYV3" FT /db_xref="InterPro:IPR001270" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004176" FT /db_xref="InterPro:IPR013093" FT /db_xref="InterPro:IPR017730" FT /db_xref="InterPro:IPR018368" FT /db_xref="InterPro:IPR019489" FT /db_xref="InterPro:IPR023150" FT /db_xref="UniProtKB/TrEMBL:A5HYV3" FT /protein_id="CAL81962.1" FT /translation="MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGL FT IPNILGKMGVNIRDINAETNRVLDNMPKVLGEGAQSSSVYPTRRFEEVFVRAEQIAKDF FT KDSYISVEHVLLAIMDVDRNTVLPILEKFGVKKSEFLKALSAVRGSQRVDNQDPEGTYE FT ALVKYGRNLVEEAKKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEG FT LAERIVRGDVQESLKNKIIFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFI FT DEIHTIVGAGKTEGSMDAGNLIKPMLARGELHCIGATTFDEYRQYIEKDKALERRFQPV FT ITDEPTIEDTVSILRGLKERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLID FT EACAMIRTDIDSMPTEMDSMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEK FT DKEMTAKYENEKSHITKIRDLKEKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREI FT EEKEKLIKENSNGNAMLKEEVTEQEISEIISKWTGIPVTRLVETERQKLLQLGDQLETR FT VIGQGEAVKAVTNAVIRARAGLKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEEN FT IIRIDMSEYMEKYSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVF FT NIFLQILDDGRLTDNKGKVIDFKNTIIIMTSNLGSNYLLDNESKEGIDESIRTRVKEAL FT KARFKPEFLNRVDDIIMFKPLTVEDIKRIIDIFLDDIRKRLKDKNIQLKITDSAKDIMA FT KEGYDPIYGARPLKRYIEDTIETEIAKQIIVGNIYEGTTVGVDLKGESIVIERI" FT misc_feature 479912..480070 FT /note="Pfam match to entry PF02861 Clp_N, Clp amino FT terminal domain, score 59.4, E-value 8.3e-15" FT /inference="protein motif:Pfam:PF02861" FT misc_feature 480152..480310 FT /note="Pfam match to entry PF02861 Clp_N, Clp amino FT terminal domain, score 58.9, E-value 1.2e-14" FT /inference="protein motif:Pfam:PF02861" FT misc_feature 480476..481060 FT /note="Pfam match to entry PF00004 AAA, ATPase family FT associated with various cellular activities (AAA), score FT 58.7, E-value 1.4e-14" FT /inference="protein motif:Pfam:PF00004" FT misc_feature 480491..480514 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 480755..480793 FT /note="PS00870 Chaperonins clpA/B signature 1." FT /inference="protein motif:ProSite:PS00870" FT misc_feature 481682..482341 FT /note="Pfam match to entry PF00004 AAA, ATPase family FT associated with various cellular activities (AAA), score FT 5.0, E-value 0.00014" FT /inference="protein motif:Pfam:PF00004" FT misc_feature 481697..481720 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 481775..481831 FT /note="PS00871 Chaperonins clpA/B signature 2." FT /inference="protein motif:ProSite:PS00871" FT repeat_region 482500..482729 FT repeat_region complement(482535..482564) FT repeat_region complement(482640..482712) FT repeat_region 482657..482729 FT CDS complement(482810..483538) FT /transl_table=11 FT /locus_tag="CBO0410" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum cobyric acid FT synthase CobQ cac0961 SWALL:Q97KF8 (EMBL:AE007611) (243 aa) FT fasta scores: E(): 8.8e-72, 77.08 38d in 240 aa" FT /db_xref="GOA:A5HYV4" FT /db_xref="InterPro:IPR011698" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/TrEMBL:A5HYV4" FT /protein_id="CAL81963.1" FT /translation="MELNICHLYPDLLNVYGDIGNILVLKYRAEQRGIKINVSNVSIKD FT NFPIDKYDIALFGGGQDYEQSIVSKDMLETKKDDLTKYIEKGKVLLAICGGYQLLGKYY FT TTPEGEKLDGLDILDIYTEGGDIRFIGNTVIKNEEFNETYVGFENHSGRTYIGNLKPLG FT KVIAGYGNNGEDQEEGCIYKSTFCTYFHGSLLSKNPELADRLLSTALKNKYGEDINLEP FT LDDNLEIKAKEFIIHRESKA" FT CDS complement(483596..484957) FT /transl_table=11 FT /locus_tag="CBO0411" FT /product="Mur ligase family protein" FT /note="Similar to Clostridium acetobutylicum FT udp-N-acetylmuramyl tripeptide synthetase cac0962 FT SWALL:Q97KF7 (EMBL:AE007611) (435 aa) fasta scores: E(): FT 2.2e-112, 64.76 38d in 437 aa" FT /db_xref="GOA:A5HYV5" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR013564" FT /db_xref="InterPro:IPR018109" FT /db_xref="UniProtKB/TrEMBL:A5HYV5" FT /protein_id="CAL81964.1" FT /translation="MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKIL FT KTVAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKFVISNSTGANMFPGIVACFVENFSF FT NNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGIEKS FT PNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYE FT FLTYNHLGSYYCENCGYKRPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNA FT LCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGKDVKIILVKNPAGYDQAINTI FT VLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIA FT GLPNEKFKISQNHDDLLEDIKSCREETVYILATYTAMTSFRKFLNSKGYIKKLW" FT misc_feature complement(484517..484825) FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, catalytic domain, score 35.3, E-value 3e-10" FT /inference="protein motif:Pfam:PF01225" FT CDS 485222..486202 FT /transl_table=11 FT /locus_tag="CBO0412" FT /product="mannose-6-phosphate isomerase" FT /EC_number="5.3.1.8" FT /note="Similar to Streptococcus mutans mannose-6-phosphate FT isomerase Pmi or ManA or smu.1839 SWALL:MANA_STRMU FT (SWALL:Q59935) (316 aa) fasta scores: E(): 1.1e-29, 35.25 FT id in 312 aa" FT /db_xref="GOA:A5HYV6" FT /db_xref="InterPro:IPR001250" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014628" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:A5HYV6" FT /protein_id="CAL81965.1" FT /translation="MYPLKFENIYLNKVWGGRGLKKFRDNLPKGDIGESWDIAFHQDLI FT SVIKNGKLKGKTLKDAIELYKNKLMGDCIFDKYKDFPLLLKIISAEKKLSIQVHPGEKD FT FLDLKESPKKEAWYVMEAKVGSYIILGSKIKDKTVLKQVIDDGTVEDYLYKVPVKKGDI FT FYIDSGMIHAIGKGVTLIEIQQNSDTTYRLYDYNRGRKLDLEKGMNCVNLDIKPNKKSG FT LKVQLKNCNKTYCFLSEAFAMEKYEVYYFLKEKSDKERFFIFTCVDGQGQINYGEGRQN FT LSRGDSILIPAYMGDYTLRGNMNLLKFYIPDIEKSINSIVNIIKC" FT misc_feature 485231..486055 FT /note="Pfam match to entry PF01238 PMI_typeI,Phosphomannose FT isomerase type I, score -42.3, E-value 8.5e-08" FT /inference="protein motif:Pfam:PF01238" FT CDS 486551..487666 FT /transl_table=11 FT /locus_tag="CBO0413" FT /product="putative lipoprotein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00544 SWALL:Q898B9 (EMBL:AE015937) (381 aa) fasta FT scores: E(): 8.2e-56, 44.75 38d in 362 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYV7" FT /protein_id="CAL81966.1" FT /translation="MYRKKLNLKTVCAFILILFINILLISCKGGSSNKGIIVEKWDNFY FT EGNNIHFYYSDGKSPNSQQLKSKYSLDKLTSKGKDDLDKALEITSWLNNKLKFSKNSIK FT TEEDTLTILEKYKEGETVSDKEFNEIFTEAISSVGIYSRIGEFRVKDAQHSKKNDFFMV FT SEIWSDKYKKWIMIDVVNSCYMSKAGVPLSAIEILNNGISGLEINEVKDKNKYIKKMER FT YFYSYTIGIDNNIHDGVKSNSYITYIQSGQLPELKTIKGYIKPTIFVNNDSLFTISPKI FT EYKDLQNDKKPTLIISKKNIEGKEEETPSFYVASFKDSVMVTEFYISVNGADFGKVNTI FT FELKLKEGQNSIKLSENGKDAVREVIVNYKK" FT sig_peptide 486551..486641 FT /locus_tag="CBO0413" FT /note="probabilty 0.985, with cleavage site probability FT 0.381 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature 486569..486628 FT /note="1 probable transmembrane helix predicted for CBO0413 FT by TMHMM2.0 at aa 7-26" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 486599..486631 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 487774..488628 FT /transl_table=11 FT /gene="upk2" FT /locus_tag="CBO0414" FT /product="putative undecaprenol kinase" FT /EC_number="2.7.1.66" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 putative undecaprenol kinase Upk or BacA or b3057 FT or z4410 or ecs3940 SWALL:UPK_ECOLI (SWALL:P31054) (273 aa) FT fasta scores: E(): 3.1e-39, 44.08 38d in 279 aa" FT /note="also similar to CBO0320 (51.056 38d)" FT /db_xref="GOA:A5HYV8" FT /db_xref="InterPro:IPR003824" FT /db_xref="UniProtKB/TrEMBL:A5HYV8" FT /protein_id="CAL81967.1" FT /translation="MLLILKAIIIGIVEGITEFLPVSSTGHMIIAGSLIGFDGTVYRKA FT YTDMFSVVIQLGAILAVVVLYWDKIISTLKNFFPSDRVPVKKCGLKFWINIVIASIPAA FT VIGIPFNDKIEEKLFYPLPVTIALIVGAIWMIYAENRYRNNSKVISIDDVNAKQAIIIG FT VFQCLALWPGMSRSASTIIGAWIVGLSTVAAAEFSFFLAIPAMIGASGMSLIKHNVFST FT CSSIELIALAAGFIVSFVVALVVIDKFIAFLKKKPMKVFAIYRIVLGIVLIILIYTNII FT TWH" FT misc_feature 487789..488589 FT /note="Pfam match to entry PF02673 BacA, Bacitracin FT resistance protein BacA, score 352.0, E-value 6.9e-103" FT /inference="protein motif:Pfam:PF02673" FT misc_feature order(487816..487884,487921..487989,488047..488106, FT 488125..488184,488314..488382,488443..488511, FT 488554..488622) FT /note="7 probable transmembrane helices predicted for FT CBO0414 by TMHMM2.0 at aa 15-37, 50-72, 92-111, FT 118-137,181-203, 224-246 and 261-283" FT /inference="protein motif:TMHMM:2.0" FT rRNA 489065..490506 FT /gene="16S rRNA" FT /product="16S ribosomal RNA" FT tRNA 490683..490758 FT /gene="tRNA Ala (TGC)" FT /note="Cove score 93.93" FT /inference="nucleotide motif:tRNAscanSE" FT tRNA 490764..490840 FT /gene="tRNA Ile (GAT)" FT /note="Cove score 99.73" FT /inference="nucleotide motif:tRNAscanSE" FT rRNA 490914..493815 FT /gene="23S rRNA" FT /product="23S ribosomal RNA" FT rRNA 493948..494064 FT /gene="5S rRNA" FT /product="5S ribosomal RNA" FT tRNA 494073..494147 FT /gene="tRNA Asn (GTT)" FT /note="Cove score 80.23" FT /inference="nucleotide motif:tRNAscanSE" FT CDS complement(494523..495386) FT /transl_table=11 FT /locus_tag="CBO0415" FT /product="metallo beta-lactamase superfamily lipoprotein" FT /note="Similar to Clostridium tetani come-like FT protein,metallo beta-lactamase superfamily hydrolase FT ctc00821 SWALL:Q897B9 (EMBL:AE015938) (304 aa) fasta FT scores: E(): 6.5e-49, 48.95 38d in 288 aa" FT /db_xref="GOA:A5HYV9" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:A5HYV9" FT /protein_id="CAL81968.1" FT /translation="MKLKKKNLIITCLLIFLSIVFTACSQQSSNAVNTSNKSNELKVHY FT IDVGQGDSILVQTKDKNILIDAGTRKSSDNLISYLKKQHIKKLDYVIATHPHEDHIGGM FT PKVIEEFEISNFYAPKKTANTKIFKDMILQLKKKNLKINVAKKGISLDLSNNSSLDFLA FT PVKDNYENTNDSSAVVKLTHGNTKFLFTGDAEKTSEKDILNSNEDLSSNVLKVGHHGSH FT SSSSKEFLDKINPKIAIISCGKNNDYGHPHKETMKELNKRNIEVYRTDIDGNIVLTSDG FT ENIKKN" FT misc_feature complement(494655..495239) FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 74.2, FT E-value 2.8e-19" FT /inference="protein motif:Pfam:PF00753" FT sig_peptide complement(495290..495386) FT /locus_tag="CBO0415" FT /note="probabilty 1.000, with cleavage site probability FT 0.745 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature complement(495315..495347) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 495523..496245 FT /transl_table=11 FT /locus_tag="CBO0416" FT /product="probable acyltransferase" FT /note="Similar to Escherichia coli FT 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC or ParF FT or b3018 SWALL:PLSC_ECOLI (SWALL:P26647) (245 aa) fasta FT scores: E(): 1.9e-09, 28.8 38d in 184 aa, and to FT Clostridium tetani putative 1-acyl-sn-glycerol-3-phosphate FT acyltransferase ctc00551 SWALL:Q898B3 (EMBL:AE015937) (242 FT aa) fasta scores: E(): 3.9e-41, 45.57 38d in 237 aa" FT /db_xref="GOA:A5HYW0" FT /db_xref="InterPro:IPR002123" FT /db_xref="InterPro:IPR004552" FT /db_xref="UniProtKB/TrEMBL:A5HYW0" FT /protein_id="CAL81969.1" FT /translation="MKSLIFYLGFALYMLLSLLRIIKLKHLKRKGNKEEIDRYINKSVV FT GWAKFIVNGIGIKINKKGLENVPDGPCLFVGNHQGLLDVPVIVSSLDRYVGFVAKKEML FT KLKILTYWMKEMKCVFMDRQNVRAAVKTINEGVENLKNGYSMLIFPEGTRSRGENLGEF FT KKGSMKLGIKAGVPIVPIAIDGTYNVLEANGKKIKAADVDLIICPPIYPNELSKEEQNN FT LSVTIKDVIQKELEKTRN" FT misc_feature 495532..495588 FT /note="1 probable transmembrane helix predicted for CBO0416 FT by TMHMM2.0 at aa 4-22" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 495694..496074 FT /note="Pfam match to entry PF01553 FT Acyltransferase,Acyltransferase, score 132.4, E-value FT 8.8e-37" FT /inference="protein motif:Pfam:PF01553" FT repeat_region 496253..496282 FT /rpt_family="CB.102" FT /rpt_type=INVERTED FT /rpt_unit_seq="gtgtctcaaaataaatttaattttgagaca" FT /inference="ab initio prediction:REPuter" FT CDS 496993..498351 FT /transl_table=11 FT /locus_tag="CBO0417" FT /product="putative 2-isopropylmalate synthase" FT /note="Similar to Streptomyces hygroscopicus FT 2-phosphinomethylmalic acid synthase PmmS SWALL:Q9LCB4 FT (EMBL:AB029822) (440 aa) fasta scores: E(): 3.5e-55,38.53 FT 38d in 436 aa, and to Salmonella typhimurium FT 2-isopropylmalate synthase LeuA or stm0113 SWALL:LEU1_SALTY FT (SWALL:P15875) (522 aa) fasta scores: E(): 7.1e-10, 25.91 FT 38d in 355 aa" FT /db_xref="GOA:A5HYW1" FT /db_xref="InterPro:IPR000891" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5HYW1" FT /protein_id="CAL81970.1" FT /translation="MVKIVKSSYNHVLQNISSPNLYKDLFPYDEIPKVTFNDIQVPMDL FT PKDIWITDTTFRDGQQSMPPYTTEQIVKIYDYLHKLDNESGVIRQTEFFLYSEKDRKAA FT EICLDRGYKFPEVTSWIRASKEDFKLVKEMGIKETGMLMSCSDYHIFKKLNTTREKAMS FT MYLEIAEEALANGIVPRCHLEDITRADFYGFVVPFVNKLMELSNKANIPIKIRACDTLG FT LGVPYSGASLPRSVQGIIHGLRYCCNVPSERIEWHGHNDFYGVVANASTSWLYGCSSVN FT TSLLGIGERTGNCPLEAMIIEYGQLKGNTANMNLHVINEIAEYFEREMNYNIPSRTPFV FT GSEFNVTRAGIHADGILKNEEIYNIFNTEKILDRPVVVAVNQYSGLAGIAAWINTYFKL FT KGENKIDKKDERIVAIKEWVDNQYENGRTTIIGNNELEVIVKQLIPDLFRRAS" FT misc_feature 497155..498015 FT /note="Pfam match to entry PF00682 HMGL-like, FT HMGL-like,score 22.0, E-value 5.4e-10" FT /inference="protein motif:Pfam:PF00682" FT CDS 498495..500420 FT /transl_table=11 FT /locus_tag="CBO0418" FT /product="putative aconitase" FT /note="Similar to Clostridium acetobutylicum aconitase a FT cac0971 SWALL:Q97KE8 (EMBL:AE007613) (642 aa) fasta scores: FT E(): 4e-183, 76.01 38d in 642 aa" FT /db_xref="GOA:A5HYW2" FT /db_xref="InterPro:IPR000573" FT /db_xref="InterPro:IPR001030" FT /db_xref="InterPro:IPR006250" FT /db_xref="InterPro:IPR015928" FT /db_xref="InterPro:IPR015931" FT /db_xref="InterPro:IPR015932" FT /db_xref="InterPro:IPR015937" FT /db_xref="InterPro:IPR018136" FT /db_xref="UniProtKB/TrEMBL:A5HYW2" FT /protein_id="CAL81971.1" FT /translation="MSLTLTEKIIKSHLVKGNMTKGEEIAIKIDNTLTQDSTGTMAYLQ FT FEALGIDKVKTKRSVAYIDHNMLQSGPENADDHLYIQTVAKKHGIYFSKPGNGICHQVN FT LERFGVPGETLLGSDSHTPTGGGIGMLAIGAGGLDVAVAMAGGEYYINMPKVVKVNLIG FT KLKPFVSAKDIILEVLRRLSVKGGVGKIFEYTGEGVKALTVPERATITNMGAELGATTS FT IFPSDEITKDFLKAQEREEDYKYLVADEDAFYDEELEINLSDLKPLAACPHSPDNIVPV FT SELKNIKVNQVAIGSCTNSSYRDMLRTASILKGKTVSENVSLVIAPGSKQVLNMMANNG FT ALTDLVMAGARILECACGPCIGMGQSPCTDAVSLRTFNRNFEGRSGTKSADVYLVSPEV FT AAVSALTGYITDPTELTDFEDIEMPNKFLINDNLIIEPATEGEVVEVKRGPNIKPFPKA FT EALKELVTGKALTKVGDNITTDHIMPSNAKLLPYRSNVPYLSNFCLTPCDEKFPEKAKE FT NGGGIIVAGTNYGQGSSREHAALAPVYLGIKAVLAKSFARIHKANLINNGILPLVFERE FT EDYDSIDEMDELVIENVLNQVEIGKIDIINKTKSIKYKTLLEATDRQKKMILKGGLLNL FT IKSSQQ" FT misc_feature 498504..499715 FT /note="Pfam match to entry PF00330 aconitase, Aconitase FT family (aconitate hydratase), score 388.1, E-value FT 9.1e-114" FT /inference="protein motif:Pfam:PF00330" FT misc_feature 499359..499409 FT /note="PS00450 Aconitase family signature 1." FT /inference="protein motif:ProSite:PS00450" FT misc_feature 499419..499442 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 499539..499580 FT /note="PS01244 Aconitase family signature 2." FT /inference="protein motif:ProSite:PS01244" FT misc_feature 499866..500321 FT /note="Pfam match to entry PF00694 Aconitase_C, Aconitase FT C-terminal domain, score 75.0, E-value 1.6e-19" FT /inference="protein motif:Pfam:PF00694" FT CDS 500453..501454 FT /transl_table=11 FT /locus_tag="CBO0419" FT /product="isocitrate dehydrogenase" FT /note="Similar to Coccidioides immitis isocitrate FT dehydrogenase IcdH SWALL:Q8X1D0 (EMBL:AF439265) (347 aa) FT fasta scores: E(): 2e-58, 51.35 38d in 333 aa" FT /db_xref="GOA:A5HYW3" FT /db_xref="InterPro:IPR001804" FT /db_xref="InterPro:IPR019818" FT /db_xref="InterPro:IPR024084" FT /db_xref="UniProtKB/TrEMBL:A5HYW3" FT /protein_id="CAL81972.1" FT /translation="MMKHNITLIPGDGIGPEVTEAARKVIDAVGADINWHVVEAGEKVL FT DKYKTPLPNYVLDSIKETKVALKGPVTTPVGKGFRSVNVTLRKSLNLYANIRPVKSYKG FT IKSRYENVDLIIVRENTEDLYAGIEHMIGDDIAESIKVITKKASDRIVDYAFDMARKEN FT RNKVTAVHKANIMKLSDGLFLNCAKEVASKNKDIDFEDVIVDAMAMKLVLNPEKYDVLV FT MPNLYGDILSDMAAGLVGGLGLLPGANIGYEGAVFEAAHGAAPDIAGKNKANPTACILS FT GAMMLNYIGENEKAKKIENAIEKVFVEGKCLTEDLGGSSTTEEFTKAIIENL" FT misc_feature 500465..501439 FT /note="Pfam match to entry PF00180 FT isodh,Isocitrate/isopropylmalate dehydrogenase, score FT 532.9,E-value 2.3e-157" FT /inference="protein motif:Pfam:PF00180" FT misc_feature 501125..501184 FT /note="PS00470 Isocitrate and isopropylmalate FT dehydrogenases signature." FT /inference="protein motif:ProSite:PS00470" FT CDS 501763..502488 FT /transl_table=11 FT /locus_tag="CBO0420" FT /product="probable amino acid ABC transporter, ATP binding FT protein" FT /note="Similar to Bacillus subtilis glutamine ABC FT transporter GlnQ SWALL:O34677 (EMBL:Z99117) (242 aa) fasta FT scores: E(): 4.9e-46, 56.84 38d in 241 aa, and to FT Corynebacterium glutamicum glutamate transport ATP-binding FT protein GluA or cgl1950 SWALL:GLUA_CORGL (SWALL:P48243) FT (242 aa) fasta scores: E(): 2.1e-43, 56.01 38d in 241 aa" FT /db_xref="GOA:A5HYW4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HYW4" FT /protein_id="CAL81973.1" FT /translation="MIETKNIKKTFGNLMVFEDLNLKIKKGEVVVIIGSSGSGKSTFLR FT CLNALEEINDGIIEIEGKILNSKDKKSMKELCSKMGMVFQNFNLFPHMTALDNVMIGPL FT VSKKENKEKVLKIAKNLLKKVGLEDKMDYYPSKLSGGQKQRIAIARALAMNPDIMLFDE FT PTSALDPELVGEVLSVMKKLAEEGITMVVVTHEMGFAKEVADRVIFMDGGKFVEEASPD FT VFFTCPKEERTKEFLKKVL" FT misc_feature 501841..502401 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 228.1, E-value 1.4e-65" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 501862..501885 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 502174..502218 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_binding 502671..502845 FT /locus_tag="CBO0421" FT /bound_moiety="lysine" FT /note="Lysine riboswitch" FT CDS 503006..504772 FT /transl_table=11 FT /locus_tag="CBO0421" FT /product="putative Na+/H+ antiporter" FT /note="Similar to Clostridium tetani na+/h+ antiporter FT ctc00567 SWALL:Q898A2 (EMBL:AE015937) (586 aa) fasta FT scores: E(): 2.1e-158, 70.1 38d in 572 aa" FT /db_xref="GOA:A5HYW5" FT /db_xref="InterPro:IPR018461" FT /db_xref="UniProtKB/TrEMBL:A5HYW5" FT /protein_id="CAL81974.1" FT /translation="MKKNRGVLLTFSFVLMILLFNNMSVLAADLDPKVVAENASRLGIW FT TILPPVIAIVLAFITKNVVISLALGVFSGSFLLQLNGNNIFGASFKAFLDFINRILNSL FT ADPWNAGIILQCMVIGGLIAVISKMGGAKAVAESLAKKARTPKSAQIITWFLGLLVFFD FT DYANALIVGPIMRPVADKMKISREKLAFIIDGTAAPIAGIAVISTWIGYEISLIKDAYA FT SIGQSVNAYGLFLSTIPYRFYNILILAFIVLIALMGRDFGPMLKAERRARTTGKLLSDT FT AKPMVSEESTELEPREGIKLNIWNAIIPIAILIIGAFAGFYYNGYQAIMGGEDKALIQM FT LQTSPASFDALRETFSASDASVVLFQSALLASIVAIIMGASQKIFKVGEAIDVWITGMK FT SLIITAVILLLAWSLSAVIKELGTATFLVSILSNSIPKFLLPSIIFILGSVISFATGSA FT YGTMGILMPLTIPLAYAISPDPTYVVISVSAVLTGAIFGDHCSPISDTTIMSSMGSACD FT HLDHTSTQMVYALTVAACTILFGYIPAGLGLPIYIVLPLSIGLVALLIRFVGKPNDIPE FT EESLEEVLEMDA" FT sig_peptide 503006..503084 FT /locus_tag="CBO0421" FT /note="probabilty 1.000, with cleavage site probability FT 0.639 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(503018..503086,503129..503182,503195..503263, FT 503333..503401,503462..503530,503573..503641, FT 503702..503770,503912..503980,504086..504145, FT 504188..504256,504317..504385,504428..504496, FT 504581..504634,504644..504712) FT /note="14 probable transmembrane helices predicted for FT CBO0421 by TMHMM2.0 at aa 5-27, 42-59, 64-86, FT 110-132,153-175, 190-212, 233-255, 303-325, 361-380, FT 395-417,438-460, 475-497, 526-543 and 547-569" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 503603..504643 FT /note="Pfam match to entry PF03553 Na_H_antiporter, Na+/H+ FT antiporter family, score 270.0, E-value 3.2e-78" FT /inference="protein motif:Pfam:PF03553" FT CDS complement(504799..505014) FT /transl_table=11 FT /locus_tag="CBO0422" FT /product="putative membrane protein" FT /note="Similar to Clostridium acetobutylicum FT uncharacterized conserved protein, ortholog yuza b.subtilis FT cac0976 SWALL:Q97KE3 (EMBL:AE007613) (69 aa) fasta scores: FT E(): 7.5e-19, 79.68 38d in 64 aa" FT /db_xref="InterPro:IPR007211" FT /db_xref="UniProtKB/TrEMBL:A5HYW6" FT /protein_id="CAL81975.1" FT /translation="MKTLDIISLTLVIIGAINWGLIGFFRFDLVAALFGDMSAFTRVIY FT ALVGIAGLYAISFYGRDRDEEPREEQ" FT misc_feature complement(504805..505014) FT /note="Pfam match to entry PF04070 DUF378, Domain of FT unknown function (DUF378), score 135.1, E-value 1.4e-37" FT /inference="protein motif:Pfam:PF04070" FT misc_feature complement(order(504841..504900,504928..504996)) FT /note="2 probable transmembrane helices predicted for FT CBO0422 by TMHMM2.0 at aa 7-29 and 39-58" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(505102..505485) FT /transl_table=11 FT /gene="panD" FT /locus_tag="CBO0423" FT /product="aspartate 1-decarboxylase" FT /EC_number="4.1.1.11" FT /note="Similar to Escherichia coli, Escherichia coli FT O6,Escherichia coli O157:H7, and Shigella flexneri FT aspartate 1-decarboxylase precursor PanD or b0131 or c0160 FT or z0142 or ecs0135 or sf0128 or s0130 SWALL:PAND_ECOLI FT (SWALL:P31664) (126 aa) fasta scores: E(): 4.6e-13, 42.24 FT id in 116 aa" FT /db_xref="GOA:A5HYW7" FT /db_xref="InterPro:IPR003190" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/TrEMBL:A5HYW7" FT /protein_id="CAL81976.1" FT /translation="MTITMLKSKIHRATVTEANLNYVGSITIDKYLMDKANILEYEKVQ FT IVDIDNGNRFETYVIAGEKHSGVICLNGAAARMVQKGDKIIIMSYCNLTIDEANKFNPT FT VLFVDNKNNIEKLTNYEKHGEII" FT misc_feature complement(505138..505485) FT /note="Pfam match to entry PF02261 Asp_decarbox, Aspartate FT decarboxylase, score 251.9, E-value 9.3e-73" FT /inference="protein motif:Pfam:PF02261" FT CDS complement(505634..506479) FT /transl_table=11 FT /gene="panC" FT /locus_tag="CBO0424" FT /product="pantoate--beta-alanine ligase" FT /EC_number="6.3.2.1" FT /note="Similar to Escherichia coli pantoate--beta-alanine FT ligase PanC or b0133 SWALL:PANC_ECOLI (SWALL:P31663) (283 FT aa) fasta scores: E(): 1.5e-39, 43.88 38d in 278 aa" FT /db_xref="GOA:A5HYW8" FT /db_xref="InterPro:IPR003721" FT /db_xref="InterPro:IPR004821" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:A5HYW8" FT /protein_id="CAL81977.1" FT /translation="MNIVNTIKDVRLIIKKWKDENLSIGYVPTMGYLHEGHASLIKKAR FT EENDKIIVSIFVNPIQFGPKEDYSTYPRDLVKDSSLCEKFGVDLIFNPETSEMYPNKIY FT SHINVDILTEKLCGEKRPGHFQGVCTVLTKFFNILNPTKAYFGEKDAQQLAVVRKMVED FT LNFPIEIIGCPIIREEDGLAKSSRNAYLNKQERKSALILNKSLKEALKALESGEKNLNN FT IKDIIVSKLNKEPLAKIDYVSIVDSITLQSVEKIQSSILVAIAVYIGKTRLIDNFTFKL FT " FT misc_feature complement(505643..506479) FT /note="Pfam match to entry PF02569 FT Pantoate_ligase,Pantoate-beta-alanine ligase, score 475.1, FT E-value 5.9e-140" FT /inference="protein motif:Pfam:PF02569" FT CDS complement(506533..507360) FT /transl_table=11 FT /gene="panB" FT /locus_tag="CBO0425" FT /product="3-methyl-2-oxobutanoate hydroxymethyltransferase" FT /EC_number="2.1.2.11" FT /note="Similar to Escherichia coli 3-methyl-2-oxobutanoate FT hydroxymethyltransferase PanB or b0134 SWALL:PANB_ECOLI FT (SWALL:P31057) (264 aa) fasta scores: E(): 4.7e-38, 46.36 FT id in 261 aa" FT /db_xref="GOA:A5HYW9" FT /db_xref="InterPro:IPR003700" FT /db_xref="InterPro:IPR015813" FT /db_xref="UniProtKB/TrEMBL:A5HYW9" FT /protein_id="CAL81978.1" FT /translation="MRNTVSTFQELKNKGEKITMLTAYDYSMAKLIDSSGINGILVGDS FT LGMVCLGYENTLSVTMEDMLHHTKAVVRGTSNALVVGDMPFMSYQTSIYDAVYNAGRFI FT KEAGAHAVKLEGGATVAEEIKAIVKAQIPVMGHIGLTPQSVNMFGGFKVQGKNEKVAKK FT LIEDAKILEEAGAFSIVLECIPEKLSKIISESISIPTIGIGAGKYCDGQILVYQDMLSM FT FSDFKPKFVKSFGNIGESIKDGVSQYIKEVKEAKFPEEKHAFKIDDDVINKLY" FT misc_feature complement(506578..507360) FT /note="Pfam match to entry PF02548 FT Pantoate_transf,Ketopantoate hydroxymethyltransferase, FT score 521.3,E-value 7.3e-154" FT /inference="protein motif:Pfam:PF02548" FT CDS 508161..511613 FT /transl_table=11 FT /gene="addB" FT /locus_tag="CBO0426" FT /product="ATP-dependent nuclease subunit B" FT /note="Similar to Bacillus subtilis ATP-dependent nuclease FT subunit B AddB or bsu10620 SWALL:ADDB_BACSU (SWALL:P23477) FT (1166 aa) fasta scores: E(): 5.1e-92, 34.47 38d in 1166 aa" FT /db_xref="GOA:A5HYX0" FT /db_xref="InterPro:IPR011335" FT /db_xref="InterPro:IPR014140" FT /db_xref="UniProtKB/Swiss-Prot:A5HYX0" FT /protein_id="CAL81979.1" FT /translation="MSLRFIYGRAGSGKSQYCLNSIKNRIEEDIDRPLILLVPEQFSFQ FT AEKNLIEVLDEKTGFKTQVLSFKRMAYRVFNEVGGITAKHMNESGKSMLLYNIIEDNKN FT NLKVFKKAAKRQGFITTISDIITEFKRYNITPEIILNNLENIEGDNLKYKMEDLALIFS FT QFETRLHKNYIDNEDDLTILAEKLNKSKQFDNAEIWIDEFSSFSPQEYSVLEKLLLKSY FT RINITLCTDYLNQGRFVDTTDVFSPIKNTENKLLQIIEDNNIKLDKPIALNCDPCARFK FT NSAELQHLEKNMFSFPYKEYKNETKDICMLKTLNQFTEIENTAKDIIKLCIDKGCRFKD FT IAVITGDLEGYENIISSVFLQYNIPFFIDKKREINNNPIIVLILSALEVLSKNWTYESV FT FRYLKTGLLDINNEEMDILENYVLANGIKGYQWTNDKPWEHKFFSNYELEDQVEKELLA FT KINDIRYKAMEPIVTLNKNFKSIDKAKEFCEVLYEFLCNINLPDKIQNMIEDFKVEGEI FT EKASEYNQIWNIVMEVLDQIVEVIGEEKISLKEFFKILQTGLSEYEIGLIPPTLDQVMV FT GSITRLRSHNINTLYIVGVNDGIFPSPLKEEGILSDDDRKFLGDKGLEIAKDTKSIAFE FT EQFLVYSTLTTPSKYLRLSYPIADGEGKTLRPSIIISRIKKIFTNICEENDIVKLNGEE FT EELKNISSAKPTFNYLISNLRKDVEGAKIDNIWGDTYKWYLENEFWIEKLNRLIKGFDY FT TNQSKYIETKKIRNLYGKPLKISVSRVEKFSQCPFAYFVQYGLKAKDRKIFNLSYPDLG FT IFMHSILEKFSHELEKQGLEWDTMDLNWAEEEIDKLINEELDNKSLDILNSSKRYEYVT FT KSVKKILKRSIWLIGEHIKRGNFKPSYYELSFDIDGDYPPIAMELHSGEVVNLIGRVDR FT VDLLQKDGATYLKIIDYKSGAKEFKLSDVYYGLQLQLLIYLDAILTELAERSGINGEPG FT ALLYLKLDDPIVKNTVDMSDEEIEKSIIKNLKMKGLILNDPNVIRDMDNIISGISDIIP FT VMVKKDGGVSEGRSSVATKEEFETLRKYVRYTIIEICEEMLEGNIEIKPYKKKDGSSCD FT YCIYSSVCKFDTNIRGNKYNILIDKKDEEVWDAIKKKLEYKNI" FT misc_feature 508182..508205 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region complement(511666..511741) FT CDS complement(511827..512213) FT /transl_table=11 FT /locus_tag="CBO0427" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYX1" FT /protein_id="CAL81980.1" FT /translation="MFNYCNACFVCVPMPMYTTGTKPMLPMEYGHENKTKENEANLKRL FT YPKIYFKIFPLVKEHCEIMKKEKGKDYCPSEKEVDTVCKEIYKRIKPELDDDEDDYTRQ FT RRYRRRHAINDLIRIIFISQLLGI" FT CDS 512520..513170 FT /transl_table=11 FT /locus_tag="CBO0428" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani hypothetical protein FT ctc01031 SWALL:Q896H3 (EMBL:AE015939) (222 aa) fasta FT scores: E(): 1.8e-19, 37.44 38d in 211 aa" FT /db_xref="GOA:A5HYX2" FT /db_xref="InterPro:IPR001440" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5HYX2" FT /protein_id="CAL81981.1" FT /translation="MKKNLSRKYEKLLLDNYRRNIDNSNYKDLILEGISSHKAIHRYLK FT DYIKNNKEVLDLNWGKQMLLFIISFNEKDLELAEICYKSLKKYPDNYFTESVMADINLR FT FYGNLFKARDKYLNALNLYDRDALVYYNLGLIYYLLGMFKKSMDFYNKSLNYINKMDNK FT EFIKSKCLYNIAVCEINYNNNYKEGEKLLKRSLKLNPHYKEANDLLEKLRGEK" FT misc_feature 512898..512999 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 25.1, E-value 0.00017" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 513021..513125 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 10.5, E-value 0.21" FT /inference="protein motif:Pfam:PF00515" FT CDS 513173..513859 FT /transl_table=11 FT /locus_tag="CBO0429" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc01032 SWALL:Q896H2 (EMBL:AE015939) (235 aa) fasta FT scores: E(): 1.1e-41, 50.67 38d in 223 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYX3" FT /protein_id="CAL81982.1" FT /translation="MMPKQKELWIPNDEVAEKIILIQIECSLNENYEKLENNTMFIESM FT KRKDNSPVLEVAPKLKNTNILGLYERMLPLTKVDLMYASVYSKTGGVLNLFNEKISENM FT DIQFKELSSKSRNTNEAIKKWKGEPSELWSGLTPSQIWAGGGKVEKALLMDFLNKLTEL FT MNGKQFTTKGAAFMNCIDVLRTWQLNKNDICEGKTPMEAIIEERNLILKDKIDFIKENN FT IECDFV" FT CDS complement(514108..514716) FT /transl_table=11 FT /locus_tag="CBO0430" FT /product="TetR-family transcriptional regulator" FT /note="Similar to Bacteroides thetaiotaomicron FT transcriptional regulator bt0507 SWALL:Q8AAF8 FT (EMBL:AE016928) (202 aa) fasta scores: E(): 9.5e-06,26.31 FT 38d in 190 aa" FT /db_xref="GOA:A5HYX4" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023772" FT /db_xref="InterPro:IPR023773" FT /db_xref="UniProtKB/TrEMBL:A5HYX4" FT /protein_id="CAL81983.1" FT /translation="MNVNEYNQKKQHILEAAIIKFTENGFDKTSLREIASAAGLTTGAI FT YHHFKNKDELFYHAVKEAMCFAQKLSEKDENSNLKSAEDMLDEISNKVKERMSKINEQR FT LLVLLIGYVLSKGGALNESLKQDYNEIISKVADMYFFAFGIENEYYKKSLASILIAALD FT GVAMQYSLGVLKQEDQKFKDIFVNFFIESIPAFMQKYKP" FT misc_feature complement(514540..514680) FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 66.8, E-value FT 4.7e-17" FT /inference="protein motif:Pfam:PF00440" FT misc_feature complement(514552..514644) FT /note="PS01081 Bacterial regulatory proteins, tetR family FT signature." FT /inference="protein motif:ProSite:PS01081" FT misc_feature complement(514567..514632) FT /note="Predicted helix-turn-helix motif with score FT 1898.000, SD 5.65 at aa 29-50, sequence FT TSLREIASAAGLTTGAIYHHFK" FT CDS 514961..515632 FT /transl_table=11 FT /gene="hypB" FT /locus_tag="CBO0431" FT /product="hydrogenase nickel incorporation protein" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT hydrogenase isoenzymes nickel incorporation protein HypB or FT b2727 or c3287 SWALL:HYPB_ECOLI (SWALL:P24190) (290 aa) FT fasta scores: E(): 3e-28, 40.74 38d in 216 aa" FT /db_xref="GOA:A5HYX5" FT /db_xref="InterPro:IPR003495" FT /db_xref="InterPro:IPR004392" FT /db_xref="InterPro:IPR012202" FT /db_xref="UniProtKB/TrEMBL:A5HYX5" FT /protein_id="CAL81984.1" FT /translation="MKTYKVLEIKQSVFENNDRQAELLREELKKKGIFLLNLMSSPGSG FT KTTTLLRTVKALKNEMNIGVLEADIDSEVDANKVSQSGVKVIQLHTGGMCHLDADMTKQ FT SLNGLGTENIDLAVLENIGNLVCPAEFDTGASRNAMILSIPEGDDKPLKYPLMFSIVDV FT LLINKIDAKDYFEFDLEAVKERVRKLNPNIKVIPISAKTGEGIEEWIDWIRKEVKIWKE FT S" FT misc_feature 515027..515410 FT /note="Pfam match to entry PF01495 HypB_UreG, HypB/UreG FT nucleotide-binding domain, score 148.4, E-value 1.4e-41" FT /inference="protein motif:Pfam:PF01495" FT CDS 515868..518546 FT /transl_table=11 FT /locus_tag="CBO0432" FT /product="putative pyridine nucleotide-disulphide FT oxidoreductase" FT /note="Similar to Moorella thermoacetica formate FT dehydrogenase beta subunit fdhB SWALL:P77907 (EMBL:U73807) FT (707 aa) fasta scores: E(): 5.5e-36, 34.26 38d in 502 aa" FT /db_xref="GOA:A5HYX6" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:A5HYX6" FT /protein_id="CAL81985.1" FT /translation="MIKEKVLDLANHISNKKRGSKNEIKATDPEYMILEPVVTNEMAEV FT ALCMEIRKKVTAKEIAPLCGKTLEETTKLLLELAEAGVCFVNEVDGIDIFWYDTWVPGI FT MEMMVNNKKNVKKYPQIARAFEAYGRVRGPKTAGSFPVGVGLMRVIPIEHAISGETRRA FT SYEEVSKYLNENEIFSVADCSCRTAREVMGEGCGHLKEDMCIQMGHAAEYYIRTGRGRQ FT ITREEAFEIIKRAEENGLMHQIPNLDGSGKTHAICNCCGCSCLSLRTAGMFINADMVRS FT NYVSKVDKEKCVACGECVQNCPVNALQLGQKLCSRTPVTTEIKRTETPRDTEWGPDKWN FT PDYRINRKNVVDTGTSPCKTQCPAHIAVQGYIKLAAQEKYKEALELIKHENPFPAVCGR FT ICPRKCESACTRGDIDKPVAIDEIKKFIAEQDLNVKYRYVPKRRHEYGKKIAVIGAGPS FT GLSCAYFLAIDGYKVTVFEKQEVLGGMLTLGIPSFRLEKEVVNAEIDILKELGVEFKTG FT VEVGKDVAFKELRDQDFKAFYIAIGASMGRKLGIEGEDAENVITGIDFMRDANLGKDLK FT LEGDVIVIGGGNVAIDVARTATRIGDTQVKMYCLESHEEMPALPEEIEEALSEDIQINN FT SWGPKRIIVENGRATGIEFKKCISVFNEQGKFNPIYDENNTITVKADTILLSIGQGMDW FT GELLKDSKVELNRNNTIKADPVTLQTAEEDIFAGGDALTGPKFAIDSIALGKEGAISIH FT RYVQPGQSLIIGRDRKEYHALDKENLEIEGYDRTPRQDIGHVDGSKSKKTFKDLRGTFT FT KEQVKKETERCLSCGATVVDEFLCVGCGQCTTKCKFDAISLVRKYDGEGVAYEDLKPVV FT IKQVLKRKVKITTKKVKTLLK" FT misc_feature 516720..516791 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 37.8, E-value 2.7e-08" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 516741..516776 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 517212..518087 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 66.3, E-value FT 6.9e-17" FT /inference="protein motif:Pfam:PF00070" FT misc_feature 518352..518423 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 30.8, E-value 3.2e-06" FT /inference="protein motif:Pfam:PF00037" FT CDS 518599..518943 FT /transl_table=11 FT /gene="hypA" FT /locus_tag="CBO0433" FT /product="hydrogenase nickel incorporation protein" FT /note="Similar to Bradyrhizobium japonicum hydrogenase FT nickel incorporation protein HypA or bll6932 FT SWALL:HYPA_BRAJA (SWALL:Q45256) (113 aa) fasta scores: E(): FT 6.6e-08, 30 38d in 110 aa" FT /db_xref="GOA:A5HYX7" FT /db_xref="InterPro:IPR000688" FT /db_xref="UniProtKB/TrEMBL:A5HYX7" FT /protein_id="CAL81986.1" FT /translation="MLHELGVIIEVVKTVEDIAIKNHLTKIDTIVLQIGELSSMIPKYI FT EECYPAAVDGTIMESTKLKIEILPGNALCKKCNKVYNIMANRRGCPYCESREWELLCGK FT EFLIKEILAY" FT misc_feature 518605..518940 FT /note="Pfam match to entry PF01155 HypA, Hydrogenase FT expression/synthesis hypA family, score 60.1, E-value FT 5.1e-15" FT /inference="protein motif:Pfam:PF01155" FT CDS 518982..519968 FT /transl_table=11 FT /locus_tag="CBO0434" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYX8" FT /protein_id="CAL81987.1" FT /translation="MFEFNYAEGATIFTALGIWFIVFASLFLFNEFGRRKKWVGFFSFV FT VLPIILTITWFTVLKDVTYTDWFHLAKVYSATAGCIGFWFIRHIEKKDRLTGEVVWRLA FT DNKIALCFPPLILAINILEAVGRDIEVGSLYWMMNSGAIKGEIVGVMGGPWNYMNAAAG FT ILNIITITGWFGIKIRKETNKDKSRDMIWPDMLWFWIIAYDVWNFVYTYNCIPTHSWYA FT GLALLFAPTLCAFTVGKGAWLQHRAQTLAIWCMFAQTFPKFQDTGMFVVKSTYNPTIYT FT ILSAIALGVNIAVFIYMIYKVKKTKKNPYKQELYSDLDKFKEVKIMA" FT misc_feature order(519009..519068,519093..519152,519180..519239, FT 519438..519506,519549..519617,519636..519695, FT 519813..519881) FT /note="7 probable transmembrane helices predicted for FT CBO0434 by TMHMM2.0 at aa 10-29, 38-57, 67-86, FT 153-175,190-212, 219-238 and 278-300" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(520142..520630) FT /transl_table=11 FT /locus_tag="CBO0435" FT /product="putative exported protein" FT /note="Similar to Carsonella ruddii alkyl hydroperoxide FT reductase small subunit AhpC SWALL:Q9AIY8 (EMBL:AF211135) FT (177 aa) fasta scores: E(): 7.1, 27.32 38d in 161 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYX9" FT /protein_id="CAL81988.1" FT /translation="MKKLSFKTIWNIIILIPLIGFFCGLVPIKYNGSTKEYNGYYYSYQ FT AKKIQAKDPIKVKLVFKSYTKFYLFKLTKSDEFKGELFINNTKYDIKRLNFINDKSVHN FT KYIGQIKNNKSNYNFSTIFISEDLNMASISDYNKNYDIWCTTKNLNDIKNVDMKFFKE" FT sig_peptide complement(520537..520630) FT /locus_tag="CBO0435" FT /note="probabilty 0.834, with cleavage site probability FT 0.705 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS 521001..524840 FT /transl_table=11 FT /gene="addA" FT /locus_tag="CBO0436" FT /product="ATP-dependent nuclease subunit A" FT /note="Similar to Bacillus subtilis ATP-dependent nuclease FT subunit A AddA or bsu10630 SWALL:ADDA_BACSU (SWALL:P23478) FT (1232 aa) fasta scores: E(): 1.2e-58, 38.82 38d in 1288 aa" FT /db_xref="GOA:A5HYY0" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR011335" FT /db_xref="InterPro:IPR011604" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="InterPro:IPR014152" FT /db_xref="UniProtKB/Swiss-Prot:A5HYY0" FT /protein_id="CAL81989.1" FT /translation="MSGTKWTDEQRQAIFTKDCNLLVAAGAGAGKTAVLVQRIIEKILD FT KGEPIDIDKLLVVTFTNAAAAEMRERIGDAISKGLDEDPESKVLRKQLTLLNKSNIMTI FT HSFCLQVIKNNFHTMEIDPNFRICDETEGILMKQEAIDELFDELYEIENEDFINLVESY FT ASRKDTRLQEVVLELHRFAKSAPFSYDWLLNMAEEFNVGEEFNFEETPWADMIMEDMKV FT LLHGFKNMLQQSIDVILNSEGIDYYYEPFKMDLSFINSLLEKSSFKEFRGEIIAYDFPK FT LPLKRNKDADKEAKERVKKLRDKVKKKIVELKNILDSYENEFIKKEFIFLYPSMKALSN FT LVILFDKKYEAKKRERDLIDFNDIEHLCLSILTDKNSEGHIIPSDIALDYRKKFAEVLI FT DEYQDSNLVQEVIMSMVSRVKGYWSFYNGQLMFNEEEINLEEPQICLDIPNRFMVGDVK FT QSIYRFRQAKPEIFLDKYNEYSEEEGTKNRKVKLFKNFRSRKEVINGVNYLFKQIMSKT FT IGELDYTEEEALKVGASYGEEVKGEPIELCLMDKKYEISEEVLKEYNVDEEEALDNIQL FT EGRLVAKKIQKLVGNNLEGGLKVFDKKLGEYRNLQYRDIVILMRATSNWAPIFVEELAK FT EGIPVFADTNSGYFDTAEIKTMISLLQIIDNPLQDIPLLSVLRSPIASFTDDELIDIRM FT VNKNITFYECMEIIYRLYKNEKLDSYYSFYIEDENKINKIIKDMNEKLKNKICSFIEKL FT KLWREKSIHIDIDEFIWFLYVETGYYGYAGALQAGEQRQANLRILFQRAKQYAKTSYKG FT LFNFINFINKLKFSSGDMGSAKILGENENVVRIMSIHKSKGLEFPVVILSGTGKNFNMT FT DLNKNILFHRDLGYGPDYVDTERRIAYPSLVKNIIKNKIRLETLSEEMRILYVALTRAR FT EKLIITGLINNMDKTVEDWLNLSEDKNKVPEYAVMSGKTYLDWIGPALIKHKDAVSFRE FT ELKMTSELSNIVDDKSKWKIELWNKRELLKEKVEEDEVEISEKIKETLMNLEESNYKEE FT IYKRLSFKYKYDNASSIPTKLSVSDVKKQFILDEKENTEELFKKLELRKPMFMEEKKKI FT SPSERGTIIHLFMQHLDLKKAENEEDIKEQINRLIEREFITYEQSKVINPYKILKFCRG FT ELGKRILNSNNVNKEMPFSIEIPALEIYKELDKEIYKDEKLIIQGVIDCYFEEEDGLVL FT LDYKTDYVNDIEEIKNRYEIQIKYYEEALNRITGKNVKDKYLYLFSVDNYIKID" FT misc_feature 521016..523334 FT /note="Pfam match to entry PF00580 UvrD-helicase, UvrD/REP FT helicase, score 284.3, E-value 1.6e-82" FT /inference="protein motif:Pfam:PF00580" FT misc_feature 521073..521096 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 524980..526671 FT /transl_table=11 FT /locus_tag="CBO0437" FT /product="methyl-accepting chemotaxis protein" FT /note="Similar to Bacillus subtilis methyl-accepting FT chemotaxis protein TlpC or bsu03440 SWALL:TLPC_BACSU FT (SWALL:P39209) (573 aa) fasta scores: E(): 1.6e-22, 32.24 FT id in 397 aa" FT /db_xref="GOA:A5HYY1" FT /db_xref="InterPro:IPR000727" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR004090" FT /db_xref="UniProtKB/TrEMBL:A5HYY1" FT /protein_id="CAL81990.1" FT /translation="MSGLKNKLIRQIALLFNVLILILCATFFIGTKSILKGLENNDPNL FT LASFSSSYLKFIAIMFIIMLAVSYIVVRVFVTKAYNSIEEVAEIIDRVSKGEFATRVPE FT EGILEPIGVSVNAIVRNTKKILSDLLQISQKNRIISNTLHENALDSNQATENIASSVIS FT VAETATTQADSTTSTRNNTSEMAENSTVIAEKAQNTKNIAEEMVKTIKENQKTFETMIY FT KIKSTGDVSKKLAKNVRILESEAEEISKITDVVTEISERTNLLALNAAIEAARAGEHGK FT GFSVVADEVRKLAEQSSESAGEIRKLIEKITYQITNITEEAENQSKEVEEDIVYADESR FT ESFNEIISSTDETYNSVEQIYDLSDKNTTISKEVDQLMETIASGAQQSASMTEEISAAV FT EEQSASINEITQLIKEMNVCTDEIDSELKAFVTNITIKGEQKQLVNEGFNILEKISREI FT NSNNLSVDACSNICKQYVEANNQFEYIGVIDKEGIMKSANVPITKGNDDFSHRPYFKKA FT ILGEKYASKPYISSVSYNYCIAIAISLKDKNGNIQAVVMGDVCIEQ" FT sig_peptide 524980..525082 FT /locus_tag="CBO0437" FT /note="probabilty 0.948, with cleavage site probability FT 0.353 between residues 35 and 36" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(525016..525084,525127..525195) FT /note="2 probable transmembrane helices predicted for FT CBO0437 by TMHMM2.0 at aa 13-35 and 50-72" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 525412..526236 FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 159.4, E-value 6.6e-45" FT /inference="protein motif:Pfam:PF00015" FT CDS 526748..527974 FT /transl_table=11 FT /gene="pepT" FT /locus_tag="CBO0438" FT /product="peptidase T" FT /EC_number="3.4.11.14" FT /note="Similar to Bacillus subtilis peptidase T PepT or FT bsu38920 SWALL:PEPT_BACSU (SWALL:P55179) (410 aa) fasta FT scores: E(): 7.9e-87, 57.17 38d in 404 aa" FT /db_xref="GOA:A5HYY2" FT /db_xref="InterPro:IPR001261" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010161" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/Swiss-Prot:A5HYY2" FT /protein_id="CAL81991.1" FT /translation="MKDVLERFLGYIKVDTQSSEESDTVPTTKTQLEFAKKLGEELKAI FT GLKDVSVDENGYVMATLESNIDKKVPTIGFIAHMDTSPDLSGTNINPRIVEKYDGQDIV FT LNKEKNIVLKINEFPEILEYKGQDIVVTDGNTLLGADDKAGIAEIITAMEYLINHPEIK FT HGTIKVGFTPDEEVGKGADHFDVKKFGADLAYTLDGGGIGELECETFNAAKAKVIIEGR FT NVHPGSAKNKMTNAVLVANKFINMLPENEVPERTEGYEGFFHLLSVKSEVETAELNYII FT RDFDRKKFEERKEQIKEVGKKINEEYNKEIVCVKVEDQYYNMKEKIDEVKYVVDIAYDA FT MKAIDIEPILVPIRGGTDGSRLSFMGLPTPNLFAGGHNFHGRFEFVPVLSMEKAAELVV FT KIAELYANR" FT misc_feature 526769..527968 FT /note="Pfam match to entry PF01546 Peptidase_M20,Peptidase FT family M20/M25/M40, score 188.6, E-value 1e-53" FT /inference="protein motif:Pfam:PF01546" FT misc_feature 526964..526993 FT /note="PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family FT signature 1." FT /inference="protein motif:ProSite:PS00758" FT misc_feature 527162..527281 FT /note="PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family FT signature 2." FT /inference="protein motif:ProSite:PS00759" FT CDS complement(528249..529181) FT /transl_table=11 FT /locus_tag="CBO0439" FT /product="putative patatin-like phospholipase" FT /note="Similar to Bacillus cereus hypothetical membrane FT spanning protein bc1989 SWALL:Q813P5 (EMBL:AE017004) (321 FT aa) fasta scores: E(): 6e-42, 41.23 38d in 308 aa" FT /db_xref="GOA:A5HYY3" FT /db_xref="InterPro:IPR002641" FT /db_xref="InterPro:IPR016035" FT /db_xref="UniProtKB/TrEMBL:A5HYY3" FT /protein_id="CAL81992.1" FT /translation="MKCNAVLDSGGIRGIGIIGALNHMENKGFTWNNIAGTSVGALIGA FT LLASGYTAKDLKHITANTDFMELLNKEGIQKSTFVGKAINFFKFNGVYSGDFMEKWIDD FT MLKVKGINTFSDLMDNDTCKLKIIASDITEKRMITFPDDLYIYGFSLSNFRVSKAIRMS FT VSIPFFFKPVEFIHGDGLSYIVDGGVCCAYPISIFDNYNDKEDIPTIGFKFDNIELSNT FT KQGKKEPLSFLFDIADTMNKKDSKEWMTDKNIDRTILIPTLGISSTDFDLSKEKTLKLY FT KSGYKSAEKFLKTWDFAKYKNKYKKEGTA" FT misc_feature complement(528585..529169) FT /note="Pfam match to entry PF01734 Patatin, Patatin-like FT phospholipase, score 107.3, E-value 3.2e-29" FT /inference="protein motif:Pfam:PF01734" FT CDS complement(529221..529379) FT /transl_table=11 FT /locus_tag="CBO0440" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYY4" FT /protein_id="CAL81993.1" FT /translation="MISNTPQMPPSCLYVSRLPANNPIAIIAIKRTTINKNFLILYFYC FT IIYIRIC" FT CDS 529483..529611 FT /transl_table=11 FT /locus_tag="CBO0441" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HYY5" FT /protein_id="CAL81994.1" FT /translation="MIVSKIIINIYDTSSVKIYIILKLIFIMCTIKLLFIIHLQKH" FT repeat_region 529534..529577 FT misc_feature 529540..529599 FT /note="1 probable transmembrane helix predicted for CBO0441 FT by TMHMM2.0 at aa 20-39" FT /inference="protein motif:TMHMM:2.0" FT CDS 529753..530469 FT /transl_table=11 FT /locus_tag="CBO0442" FT /product="metallo-beta-lactamase family protein" FT /note="Similar to Bacillus anthracis metallo-beta-lactamase FT family protein ba2399 SWALL:Q81QM5 (EMBL:AE017031) (288 aa) FT fasta scores: E(): 3.5e-34,40.43 38d in 230 aa" FT /db_xref="GOA:A5HYY6" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:A5HYY6" FT /protein_id="CAL81995.1" FT /translation="MFKKLTERVYYLEHNEDTDRPVLGYIKGDKFSIMIDGGNSANHVA FT IYMEELDKRQLSHPKFVTITHWHWDHTFGISATNAVIIANSLTNKQLCKMRGWKWDEES FT MDKRVAAGEEIEFCNSMIKKEYPEKDKIKVISADMIFNDYFMLDLGGITCEMIKIGGCH FT SDDSTIFYVPEEKILFIGDAACEDLYHGESYDKGKLKKVISILSEIEFDIVIEGHNEHT FT DKAELLEYLEGKLTEI" FT misc_feature 529813..530406 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 40.1, FT E-value 5.4e-09" FT /inference="protein motif:Pfam:PF00753" FT CDS 530675..531148 FT /transl_table=11 FT /locus_tag="CBO0443" FT /product="conserved hypothetical protein" FT /note="Similar to Methanosarcina mazei conserved protein FT mm1395 SWALL:Q8PX27 (EMBL:AE013374) (154 aa) fasta scores: FT E(): 8e-25, 48.36 38d in 153 aa" FT /db_xref="UniProtKB/TrEMBL:A5HYY7" FT /protein_id="CAL81996.1" FT /translation="MEFKLALLAVKNVSVSRQFYEELFDQKVILDLGKNVTFSGGFAIQ FT EDFAWLTNVASDSVIERSNNMELYFEVDDFDAFMQKIQEYENIKYVHQPKKYKWKQRVV FT RIYDPDHHIIEIGESMAVIAKRYLDEGYSIGETSKIIQHPIEFVKMYNQKINR" FT misc_feature 530678..531022 FT /note="Pfam match to entry PF00903 FT Glyoxalase,Glyoxalase/Bleomycin resistance FT protein/Dioxygenase superfamily, score 24.3, E-value FT 0.00029" FT /inference="protein motif:Pfam:PF00903" FT CDS 531549..532970 FT /transl_table=11 FT /locus_tag="CBO0444" FT /product="putative cell wall binding protein" FT /note="Similar to Bacillus subtilis FT N-acetylmuramoyl-L-alanine amidase cwlb precursor LytC or FT CwlB or bsu35620 SWALL:CWLB_BACSU (SWALL:Q02114) (496 aa) FT fasta scores: E(): 1.9e-30, 32.7 38d in 318 aa" FT /db_xref="InterPro:IPR007253" FT /db_xref="UniProtKB/TrEMBL:A5HYY8" FT /protein_id="CAL81997.1" FT /translation="MKKRLLNITSAVVASCVMFFSSNVVSAATLQERLCGNNRYETNSK FT IVDSGWTSSEYAVVASGDDFADALCAAPLAKQNKAPILLANKDTLSIESKKQLSRLKVK FT KVFIIGGIGVITDNVKLEIESMGIETSRIYGENRFETSIEVAKNLKNISGVVVANGYGF FT ADALSIAPVAAQKGMPILLTNRGDLSKVAKEFLDTKTLTESYVVGGTGVVSSKISSQLN FT NNTRLGGENRYETNSAVLNHFADKFSYDKVYVASGENYPDALSGSVLAAASKSPLVLVG FT DSVNSSVMSSVKAQHDKYNNVIVLGGTGVVSDVSANSIVHGIKYLNDREALTLINNANK FT LGYPVIESNAMPSIYIGDKIYQKFQDEFNSPEKIYAYLNKYYTRSSINEIMNMLQVREI FT DGAYCKIVGQLGDYNPDILNAKIKSKSIFNNKMDLVISTRHLHLPDDYTNNYKVELLYE FT DGKWRVNYWEGLIQR" FT sig_peptide 531549..531627 FT /locus_tag="CBO0444" FT /note="probabilty 1.000, with cleavage site probability FT 0.992 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature 531561..531629 FT /note="1 probable transmembrane helix predicted for CBO0444 FT by TMHMM2.0 at aa 5-27" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 531564..531596 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 531642..531914 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 49.3, E-value 9e-12" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 531939..532208 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 86.7, E-value 5.1e-23" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 532221..532502 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 64.9, E-value 1.8e-16" FT /inference="protein motif:Pfam:PF04122" FT repeat_region 533047..533087 FT /rpt_family="CB.746" FT /rpt_type=INVERTED FT /rpt_unit_seq="attatttttctagatatctattttctctaaaagtatttttt" FT /inference="ab initio prediction:REPuter" FT CDS complement(533178..533813) FT /transl_table=11 FT /locus_tag="CBO0445" FT /product="binding-protein-dependent transport FT system,membrane component" FT /note="Similar to Listeria innocua hypothetical protein FT Lin1851 lin1851 SWALL:Q92AR8 (EMBL:AL596170) (213 aa) fasta FT scores: E(): 2.2e-40, 51.65 38d in 211 aa" FT /db_xref="GOA:A5HYY9" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:A5HYY9" FT /protein_id="CAL81998.1" FT /translation="MSNLSDITIFILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIK FT PLKIILSAYTWIFRGTPLMLQLFFAYFGLPVIGIRLEPLTAAYLTFIINYGAYLAETFR FT AGIESIDEGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIG FT IGDMLRAAKEVVTRDFTITPFFIAAAIYLLITAFLVLIFRTLEKKYAY" FT misc_feature complement(533181..533783) FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 123.2, E-value 5.1e-34" FT /inference="protein motif:Pfam:PF00528" FT misc_feature complement(order(533208..533276,533577..533645, FT 533703..533771)) FT /note="3 probable transmembrane helices predicted for FT CBO0445 by TMHMM2.0 at aa 15-37, 57-79 and 180-202" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(533409..533495) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS complement(533826..534629) FT /transl_table=11 FT /locus_tag="CBO0446" FT /product="binding-protein-dependent transport FT system,permease component" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT cystine-binding periplasmic protein precursor FliY or b1920 FT or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta FT scores: E(): 5.9e-25, 33.84 38d in 260 aa" FT /db_xref="GOA:A5HYZ0" FT /db_xref="InterPro:IPR001638" FT /db_xref="InterPro:IPR018313" FT /db_xref="UniProtKB/TrEMBL:A5HYZ0" FT /protein_id="CAL81999.1" FT /translation="MKKKNILFSILIMGLIFMLTGCDNKSKEDTSLKDIKAKGEFVVGL FT DDSFPPMGFKNDKGEIVGFDIDLAKEVAKKMGIKVVFKPVQWDGVVLSLNNKDIDVIWN FT GLTITEKRKEQINFSKPYVENKQIIVVNNDSNIKSKKDLNKKTVAIQLGSSSEVALDSD FT KDFVKSLKELKKYSNNTEALMDLQAKRVDAVVVDEVVGRYYISKKPNVFKVLDEDFGGE FT SYGVGFRKTDNSFREAVDKALDEVIKDGTADKISEKWFGKGIFKK" FT misc_feature complement(533844..534509) FT /note="Pfam match to entry PF00497 SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3, score FT 276.0, E-value 5.1e-80" FT /inference="protein motif:Pfam:PF00497" FT misc_feature complement(534402..534443) FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature." FT /inference="protein motif:ProSite:PS01039" FT sig_peptide complement(534542..534629) FT /locus_tag="CBO0446" FT /note="probabilty 0.999, with cleavage site probability FT 0.890 between residues 28 and 29" FT /inference="protein motif:SignalP:2.0" FT misc_feature complement(534564..534596) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature complement(534564..534617) FT /note="1 probable transmembrane helix predicted for CBO0446 FT by TMHMM2.0 at aa 5-22" FT /inference="protein motif:TMHMM:2.0" FT CDS 534850..535578 FT /transl_table=11 FT /locus_tag="CBO0447" FT /product="putative membrane protein" FT /note="Similar to Thermoanaerobacter tengcongensis FT sam-dependent methyltransferases smta5 or tte2398 FT SWALL:Q8R7K7 (EMBL:AE013182) (222 aa) fasta scores: E(): FT 0.0023, 25.22 38d in 218 aa" FT /db_xref="GOA:A5HYZ1" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:A5HYZ1" FT /protein_id="CAL82000.1" FT /translation="MKKYTKPYYGPNNYFSVIKFFSAGILGLITFMFLLQHKEIKSYIA FT YFILFISILFIANGLRIVNFIFAGRFKHIGRIISKVNWTGNENVLDVGVGKGILAIAVA FT KKLKNGSGKVIGIDIWDSEDIMDNTKYYVNQNIELEGVADKVKIKTQNASALSFKNETF FT DVIVSKQCIHNIEDKQERKMAIEEMLRVLKTGGKLIISDSMYIDEYEKILLDKGLKVNI FT SSKYFLDTYPASSILEVTKK" FT misc_feature order(534886..534954,534982..535050) FT /note="2 probable transmembrane helices predicted for FT CBO0447 by TMHMM2.0 at aa 17-39 and 49-71" FT /inference="protein motif:TMHMM:2.0" FT repeat_region complement(535640..535826) FT /note="intergenic repeat 1" FT CDS complement(535927..537138) FT /transl_table=11 FT /locus_tag="CBO0448" FT /product="putative signaling protein" FT /note="Similar to Bacillus subtilis hypothetical protein FT yuxh or bsu31740 SWALL:YUXH_BACSU (SWALL:P14203) (409 aa) FT fasta scores: E(): 1.1e-47, 40.04 38d in 412 aa" FT /db_xref="InterPro:IPR001633" FT /db_xref="InterPro:IPR013976" FT /db_xref="InterPro:IPR014408" FT /db_xref="UniProtKB/TrEMBL:A5HYZ2" FT /protein_id="CAL82001.1" FT /translation="MDTFVARQPIFDINENVVAYELLFRTNNENNEFINIDGDIATSKV FT IINSFLLIGIKNLTNGKKAFINFTENLILDDIASLLPKEYVTIEILENVTPSKAIICSC FT KNLKQEGYTIALDDFVLMDNLKELIELADIIKIDFTITKGDERKEIIDKILKINNKIKF FT LAEKIETREEFTEAASMGYSLFQGYFFSKPTIFNERDLPIHSTTKYKILKEINKEDIDL FT NYLEELIKTDLSLYYKLLKFINSSFSLKKNITSVKKAITLIGEKQTIRFISFILVYDIT FT SNNKEYVKTTLVRAKFLDLLSEKTNYINKSDELFFMGLFYGIEDFLNKPLKDILHDLPI FT SQDTKSALLGKKNKLNYILNLVLNYEKGEWKKVNAICKHLNIYPNELTTIYINALDWTN FT KFNL" FT misc_feature complement(536542..537138) FT /note="Pfam match to entry PF00563 EAL, EAL domain, score FT -61.1, E-value 1.2e-05" FT /inference="protein motif:Pfam:PF00563" FT CDS complement(537404..538021) FT /transl_table=11 FT /gene="thiE" FT /gene_synonym="thiC" FT /locus_tag="CBO0449" FT /product="thiamine-phosphate pyrophosphorylase" FT /EC_number="2.5.1.3" FT /note="Similar to Bacillus subtilis thiamine-phosphate FT pyrophosphorylase ThiE or ThiC or ipa-26d or bsu38290 FT SWALL:THIE_BACSU (SWALL:P39594) (222 aa) fasta scores: E(): FT 1.2e-15, 39.1 38d in 179 aa" FT /db_xref="GOA:A5HYZ3" FT /db_xref="InterPro:IPR003733" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR022998" FT /db_xref="UniProtKB/Swiss-Prot:A5HYZ3" FT /protein_id="CAL82002.1" FT /translation="MEINYELYLITDRRFLKGRQLKKVVEDAILGGVTIVQVREKDVST FT REFYNVAKEVKEVTDYYKVPIIINDRLDIAQAIDASGVHLGQKDMHLNIAREILGKDKI FT IGISVGNVKEALQAQNNGADYLGIGTIFPTGSKKDVDAIIGIDGLSKIKDSISIPSVAI FT GGINKTNFKDVLKTGIEGISVISAILDEDDIKLAANNLLINK" FT misc_feature complement(537407..538012) FT /note="Pfam match to entry PF02581 TMP-TENI, Thiamine FT monophosphate synthase/TENI, score 267.1, E-value 2.4e-77" FT /inference="protein motif:Pfam:PF02581" FT CDS complement(538012..538803) FT /transl_table=11 FT /gene="thiM" FT /gene_synonym="thiK" FT /locus_tag="CBO0450" FT /product="hydroxyethylthiazole kinase" FT /EC_number="2.7.1.50" FT /note="Similar to Bacillus subtilis hydroxyethylthiazole FT kinase ThiM or ThiK or ipa-25d or bsu38300 SWALL:THIM_BACSU FT (SWALL:P39593) (272 aa) fasta scores: E(): 7.5e-30, 38.82 FT 38d in 255 aa" FT /db_xref="GOA:A5HYZ4" FT /db_xref="InterPro:IPR000417" FT /db_xref="UniProtKB/Swiss-Prot:A5HYZ4" FT /protein_id="CAL82003.1" FT /translation="MKNKNVIQKMREKTPLIHCITNYVTINDCANILLSFGASPAMCEA FT YDEVYDFVSISSALYINLGTLTKEQETAAVLASISAKNHNVPVVIDPVGCPAIKRKVEV FT INRIAEVGRIDIIKGNIGEIKFLAGMDSETRGVDSLDNGENALDACTQLAKKYNCIVAA FT TGEKDFVSDGKRGSVIKNGTEMLTKVTGAGCMLGALCAATCANFEDKLVSTTAAILSMN FT IAGEKAYEEAQLPGSFRIALIDNIYMISDEEIWERGNVEWK" FT misc_feature complement(538048..538785) FT /note="Pfam match to entry PF02110 HK,Hydroxyethylthiazole FT kinase family, score 366.2, E-value 3.6e-107" FT /inference="protein motif:Pfam:PF02110" FT CDS complement(539035..539835) FT /transl_table=11 FT /gene="thiD1" FT /locus_tag="CBO0451" FT /product="phosphomethylpyrimidine kinase" FT /EC_number="2.7.4.7" FT /note="This CDS is also similar to CBO0771 (52.308 identity FT in 260 aa overlap)" FT /db_xref="GOA:A5HYZ5" FT /db_xref="InterPro:IPR004399" FT /db_xref="InterPro:IPR013749" FT /db_xref="UniProtKB/TrEMBL:A5HYZ5" FT /protein_id="CAL82004.1" FT /translation="MKKVLTIAGSDSSGGAGIQADIKTMSSLGVYAMSIITAVTAQNSI FT GVQDVHEVPKNMVEAQIKSVFDDIDVDAVKIGMLSNSETIKSIKEYLEKYKAKNIVLDP FT VMVSKSGYFLLKPEAIEELKKLISITNIVTPNIPEAEVLSKIEINSEDDMKKAAIIIQA FT IGVKNVLVKGGHRCSDANDILLYEDKFITIPGNRIETKNTHGTGCTLSSAIASYLTKGF FT NIEKSVSLSKEYITKAIENSFPIGEGVGPVGHFIELYKKAHLDF" FT misc_feature complement(539320..539550) FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 18.7, E-value 3.5e-05" FT /inference="protein motif:Pfam:PF00294" FT misc_binding complement(540140..540243) FT /gene="thiD1" FT /locus_tag="CBO0451" FT /bound_moiety="thiamin pyrophosphate" FT /note="TPP riboswitch (THI element)" FT CDS 540847..541749 FT /transl_table=11 FT /gene="ddlB" FT /gene_synonym="ddl" FT /locus_tag="CBO0452" FT /product="D-alanine--d-alanine ligase B" FT /EC_number="6.3.2.4" FT /note="Similar to Escherichia coli D-alanine--d-alanine FT ligase B DdlB or Ddl or b0092 SWALL:DDLB_ECOLI FT (SWALL:P07862) (305 aa) fasta scores: E(): 1.6e-32, 38.74 FT id in 302 aa" FT /db_xref="GOA:A5HYZ6" FT /db_xref="InterPro:IPR000291" FT /db_xref="InterPro:IPR005905" FT /db_xref="InterPro:IPR011095" FT /db_xref="InterPro:IPR011127" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/Swiss-Prot:A5HYZ6" FT /protein_id="CAL82005.1" FT /translation="MKIGVIMGGISTEREVSLNSGREVIKYLELLEHEIIPIIIDKKED FT VMEKAKGIDFAFLALHGKFGEDGTVQSVLQTLDIPYSGCGPLTSAICMDKDMTKKILKY FT ANINTADWVNVSSVENIDYEAIEKIGYPVFVKPNSGGSSVATNLVKDKEGIKEAVELAL FT KYDKEVMIENYTKGEEITCCMLNGKMLPVLAIRPHAEFFDYTAKYADGGSDEVVIELEE FT NLHKKVEEMALACWKELKCEVYVRVDMIVKDGIPYVLELNTLPGMTKNSLFPKSANAVG FT ISFAELLNSIVKYSLEVER" FT misc_feature 540847..541725 FT /note="Pfam match to entry PF01820 Dala_Dala_ligas, D-ala FT D-ala ligase, score 308.7, E-value 7.5e-90" FT /inference="protein motif:Pfam:PF01820" FT misc_feature 541027..541062 FT /note="PS00843 D-alanine--D-alanine ligase signature 1." FT /inference="protein motif:ProSite:PS00843" FT CDS 541905..543047 FT /transl_table=11 FT /locus_tag="CBO0453" FT /product="branched-chain amino acid transport FT system,substrate-binding protein" FT /note="Similar to Pseudomonas aeruginosa FT leucine-,isoleucine-, valine-, threonine-, and FT alanine-binding protein precursor BraC or pa1074 FT SWALL:BRAC_PSEAE (SWALL:P21175) (373 aa) fasta scores: E(): FT 3.9e-25, 29.36 id in 378 aa" FT /db_xref="GOA:A5HYZ7" FT /db_xref="InterPro:IPR000709" FT /db_xref="InterPro:IPR001828" FT /db_xref="UniProtKB/TrEMBL:A5HYZ7" FT /protein_id="CAL82006.1" FT /translation="MKFAKFKKKSLIALSSLLVLGSLVGCQSNPSEKEETIKVGLVAPL FT SGAMAQDGKSILNAAQLAVDEVNKEGGINKKKIELVYEDDKGEPKEAASIANKYSSDKD FT IMAVMGSFSAPCTLAGIPIYNKAKIPMMGPCGSAPALSGSSEYYRKVTPSDLTTGKELS FT KWMLKDMNYKKVAIIYVNNDYGKGVAESVDNFYKENGGQVVAKESYMPKTQDFGSIITK FT VKSKNPDIIIMGSFYGDAGAFLKQAHNVGYNPKVAGPTPLLSKSLVDLAGKDAEGIFTI FT GSFSTNLENEKVKEFAEKYKKKYNQDPSSFAAYSYDATKILIEGIKKGGNDREKINEAL FT KNMGTYTGVTGNTKFEKSGDAEKNLIRFIVKDGKFVEWKK" FT sig_peptide 541905..542001 FT /locus_tag="CBO0453" FT /note="probabilty 1.000, with cleavage site probability FT 0.778 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 541950..541982 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 542046..542069 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 542067..543041 FT /note="Pfam match to entry PF01094 ANF_receptor, Receptor FT family ligand binding region, score 169.3, E-value 6.7e-48" FT /inference="protein motif:Pfam:PF01094" FT CDS 543051..543923 FT /transl_table=11 FT /locus_tag="CBO0454" FT /product="branched-chain amino acid transport FT system,permease protein" FT /note="Similar to Pseudomonas aeruginosa high-affinity FT branched-chain amino acid transport system permease protein FT brad brad or pa1073 SWALL:BRAD_PSEAE (SWALL:P21627) (307 FT aa) fasta scores: E(): 5.6e-23, 37 38d in 300 aa" FT /db_xref="GOA:A5HYZ8" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:A5HYZ8" FT /protein_id="CAL82007.1" FT /translation="MIIEVLVNGITLGSIYCLAALGFNMIFGVLKMLNFAHGEILMFGT FT FVFFTMISIFKIPLILAIILTIVITGLIGVLLYLIAYKPVLKGDAMAPLLSSLGVSIML FT EALGQLIWGTEIIPFPINIPKGIYSIASIKLSNIQIFIFLFSITLMIILYKFITKSNIG FT LQIRALSYNRKYAELMGIETDKITMIVFSLATILAMVSGILSSMYYDALYVTMGSGVMI FT KAFAAAILGGIGSIPGALVGGYILGVSESLVGAYISTSYVDGIAFIILVLVLIIKPNGI FT FGEEIKEKV" FT misc_feature 543063..543872 FT /note="Pfam match to entry PF02653 FT BPD_transp_2,Branched-chain amino acid transport system / FT permease component, score 145.8, E-value 8e-41" FT /inference="protein motif:Pfam:PF02653" FT misc_feature order(543069..543137,543147..543215,543228..543296, FT 543453..543521,543609..543677,543720..543788, FT 543807..543875) FT /note="7 probable transmembrane helices predicted for FT CBO0454 by TMHMM2.0 at aa 7-29, 33-55, 60-82, FT 135-157,187-209, 224-246 and 253-275" FT /inference="protein motif:TMHMM:2.0" FT CDS 543924..544868 FT /transl_table=11 FT /locus_tag="CBO0455" FT /product="branched-chain amino acid transport FT system,permease protein" FT /note="Similar to Bifidobacterium longum permease of ABC FT transporter for branched-chain amino acids bl1716 FT SWALL:Q8G3P1 (EMBL:AE014805) (358 aa) fasta scores: E(): FT 1.7e-36, 41.1 38d in 309 aa" FT /db_xref="GOA:A5HYZ9" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:A5HYZ9" FT /protein_id="CAL82008.1" FT /translation="MKLFKNNKIMFLIILAILLVAPFMITNQYILHIIITILLYSILSM FT SLNFVSGNAGQISVGHAAFYGIGAYTTSILMISAHLPFITAMLLGGLLAGICGIFLGIP FT SLRVKGNYLCIITLGFGEIVKLILLNWDKVTGGPMGISSIPSPEFLSIFKDKNLGFYYL FT ILLLFVVSFVILYKLTYSNYGLLMLAVRENEIAATSLGINITSIKLFSFIISSFIAGIA FT GGFYATYVSFISPESFMFKESITILAMVIIGGKGNIVGSIIGAIVLAIIPELLREFNDY FT RMLFYGLGLVLMIVFRPDGIYGLKYRKKFTYKS" FT sig_peptide 543924..544107 FT /locus_tag="CBO0455" FT /note="probabilty 0.973, with cleavage site probability FT 0.303 between residues 62 and 63" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(543948..544001,544011..544079,544092..544160, FT 544170..544238,544257..544316,544395..544463, FT 544557..544625,544668..544736,544773..544826) FT /note="9 probable transmembrane helices predicted for FT CBO0455 by TMHMM2.0 at aa 9-26, 30-52, 57-79, FT 83-105,112-131, 158-180, 212-234, 249-271 and 284-301" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 544008..544805 FT /note="Pfam match to entry PF02653 FT BPD_transp_2,Branched-chain amino acid transport system / FT permease component, score 166.2, E-value 5.6e-47" FT /inference="protein motif:Pfam:PF02653" FT CDS 544880..545617 FT /transl_table=11 FT /locus_tag="CBO0456" FT /product="branched-chain amino acid transport FT system,ATP-binding protein" FT /note="Similar to Bordetella bronchiseptica ABC transport FT system ATP-binding protein bb0369 SWALL:CAE30867 FT (EMBL:BX640438) (244 aa) fasta scores: E(): 2e-32, 42.43 id FT in 238 aa" FT /db_xref="GOA:A5HZ00" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5HZ00" FT /protein_id="CAL82009.1" FT /translation="MNILEVKDLNINFGGITAIDNLNFSVKKGEILGVIGPNGAGKTTL FT YNTITGIYKPSKGDIFLNNKKITGTKPYKISRLGIARTFQNIRLFNSLTVLENILVGRV FT SELKKLVKLNPYMKEIFDILEVVGLEKVINNMASDLPYGQQRKVEIARALALSPKVLLL FT DEPAAGMNNYEKQDLKNLINILREDFNITVLIIEHDMGVIMDLCDRILVLDYGKKIAEG FT SPEEISNDANVIKAYMGKGIKEI" FT misc_feature 544964..545527 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 193.7, E-value 3.1e-55" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 544985..545008 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 545619..546320 FT /transl_table=11 FT /locus_tag="CBO0457" FT /product="branched-chain amino acid transport FT system,ATP-binding protein" FT /note="Similar to Salmonella typhimurium, and Salmonella FT typhi high-affinity branched-chain amino acid transport FT ATP-binding protein LivF or LivG or stm3560 or sty4252 or FT t3962 SWALL:LIVF_SALTY (SWALL:P30294) (237 aa) fasta FT scores: E(): 5.5e-34, 44.87 38d in 234 aa" FT /db_xref="GOA:A5HZ01" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZ01" FT /protein_id="CAL82010.1" FT /translation="MLIVKDINVNYEVIPALKQISINVNEGEIVTIIGNNGSGKSTLLK FT ALTAQLKYTGHISFYGESLKGMSTHKIAQRGICLVPEGRGIFPLITVEENLLLAFCNKI FT NKGTKDQKLQEVYRRFPRLKERRTQLAGSLSGGEQQMLAIGRAILSSAKLILLDEPSMG FT LAPIMVEEVFQTIKSINKEGTSILLIEQNASMALEVCNRGYALENGKIVLEGSTEELIK FT SNFIKKIYLGR" FT misc_feature 545697..546245 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 165.2, E-value 1.1e-46" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 545718..545741 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 546018..546062 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 546349..547125 FT /transl_table=11 FT /locus_tag="CBO0458" FT /product="conserved hypothetical protein" FT /note="Similar to Methanobacterium thermoautotrophicum FT conserved protein mth526 SWALL:O26626 (EMBL:AE000835) (228 FT aa) fasta scores: E(): 1.6e-15, 32.33 38d in 201 aa" FT /db_xref="InterPro:IPR003748" FT /db_xref="UniProtKB/TrEMBL:A5HZ02" FT /protein_id="CAL82011.1" FT /translation="MDIKNICQNLYATLNLERKMVGIKFIFTKEHFEKLDIPKLNSKVN FT YCYMVKMASNGREFKANEENFNCLASARALGIISSNNYVDSGQHYGKHGLYDSLATAKK FT VQKDITFINHLIYGIEIRPLENFIKEPDVVVIITNPYNVMRIVQAYTYKYGVHKNITLG FT GNQGICSECTAVPYENNDLNISTLCSGTRFFCKWDECDMGVGFPFNKFKDIENGILKTL FT NPTEQNYKKKEIESKCKNIESNIDIKYNENYFVNYK" FT misc_feature 546352..547014 FT /note="Pfam match to entry PF02596 DUF169, Uncharacterized FT ArCR, COG2043, score 97.3, E-value 3.2e-26" FT /inference="protein motif:Pfam:PF02596" FT CDS 547527..548285 FT /transl_table=11 FT /locus_tag="CBO0459" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1930 SWALL:Q8XJ31 (EMBL:AP003192) (256 aa) fasta FT scores: E(): 6.5e-24, 34.79 38d in 250 aa" FT /db_xref="InterPro:IPR010619" FT /db_xref="UniProtKB/TrEMBL:A5HZ03" FT /protein_id="CAL82012.1" FT /translation="MEAKQVLEISLSVGKMLLSNGAESYRVEETIERICRAYNLQCECM FT VTAKGVFLSIIDDNNEKVTSLKKVKTRGVDLARIDRLNSFSRSLQDNPISYDEAKETLK FT EIDSLPFFSLPARIVAAGMTSFVYSLFFNGTIYDAIVSTFISMGIYYMLDKVSKIGFFQ FT FFQFFFAGFIIGILSLVAENVSPLVSRANVITGGIMILVPGVPLTNGIKDIIYDDFMSG FT IVKFGEAMLVVTAMGAGIATALTLGVGVKW" FT misc_feature order(547905..547973,548001..548069,548082..548150, FT 548208..548276) FT /note="4 probable transmembrane helices predicted for FT CBO0459 by TMHMM2.0 at aa 127-149, 159-181, 186-208 and FT 228-250" FT /inference="protein motif:TMHMM:2.0" FT CDS 548279..548722 FT /transl_table=11 FT /locus_tag="CBO0460" FT /product="putative membrane protein" FT /note="Similar to Staphylococcus aureus hypothetical FT protein sav0744 or sa0699 or mw0706 SWALL:Q99VN0 FT (EMBL:AP003360) (164 aa) fasta scores: E(): 2.8e-14,36.29 FT 38d in 135 aa" FT /db_xref="InterPro:IPR024528" FT /db_xref="UniProtKB/TrEMBL:A5HZ04" FT /protein_id="CAL82013.1" FT /translation="MVIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVY FT NYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFSIPGIFPLVPGITAYYAINSIVEQ FT NYALAYSKGFQTIAVGGAIAFGIMLSSTTVRFITKITQTKRVK" FT misc_feature order(548291..548344,548357..548425,548435..548488, FT 548522..548581,548624..548692) FT /note="5 probable transmembrane helices predicted for FT CBO0460 by TMHMM2.0 at aa 5-22, 27-49, 53-70, 82-101 and FT 116-138" FT /inference="protein motif:TMHMM:2.0" FT CDS 548864..550315 FT /transl_table=11 FT /locus_tag="CBO0461" FT /product="GntR-family transcriptional regulator" FT /note="Similar to Clostridium tetani transcriptional FT regulatory protein ctc00684 SWALL:Q897P7 (EMBL:AE015938) FT (481 aa) fasta scores: E(): 5.3e-110, 62 38d in 479 aa" FT /db_xref="GOA:A5HZ05" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5HZ05" FT /protein_id="CAL82014.1" FT /translation="MLFDIKLDKNSPVYIQISDYIKSMILKGMIRKDEKLPSTRELASM FT LKVSRNTIISAYEFLEDDGFIYIRKGKGAFVSNVNIHVEEKWTVNWEKNINDYAKKAEN FT LDIIKHEIPWEKGMISFKSISPDENLFDLEEFKKAFLNRFSLEGEKILNYGYAIGYRDL FT INYIMKYMKNKGVDTSNKKILITNGFTEGFDIVLSSLIKKGDKILCENPTHNTAIKIMK FT MHDIEIVGIDMDKDGINIDKLKETIGKNNIKLAYLVPSYHNPTGIVMSPEKRIKIYNIL FT KDNNIPIIEDGFNEELRYSGDHVSPMIAFSGKGNSIIYIGSFSKVLFPGIRIGWVLGDE FT KLIDYLESVKRSRNIHTSFLDQAILYEYLKSGNFEKYIKKARKIYKEKYEFALECAKKY FT IPAEYITGEGGLHIFIKLKNIKSRELLKECCKRGVIFTPGDIFYVDNKGEDTFRLGISR FT VSLEEIEKGFKIIGNSAKKLINNYI" FT misc_feature 548900..549091 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 46.4, E-value FT 6.6e-11" FT /inference="protein motif:Pfam:PF00392" FT misc_feature 548969..549043 FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT /inference="protein motif:ProSite:PS00043" FT misc_feature 548972..549037 FT /note="Predicted helix-turn-helix motif with score FT 1104.000, SD 2.95 at aa 37-58, sequence FT PSTRELASMLKVSRNTIISAYE" FT CDS 550376..550945 FT /transl_table=11 FT /locus_tag="CBO0462" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani lema-like protein LemA FT or ctc00358 SWALL:Q898T4 (EMBL:AE015937) (191 aa) fasta FT scores: E(): 3.8e-39, 59.57 38d in 188 aa" FT /db_xref="InterPro:IPR007156" FT /db_xref="InterPro:IPR023353" FT /db_xref="UniProtKB/TrEMBL:A5HZ06" FT /protein_id="CAL82015.1" FT /translation="MKKGLRNTLIVVGIILLILFPLIGTYNKLVSMEQNVSRAASNIDT FT NLQRRSDLISNLVETVKGYAAQEKDIFKGVADARSKLAGAQKIDQKAQANEELSGALSR FT LLVVVERYPDLKSSQNFKDLSVAIEGTENRIAIARQDYNESVNNYNTGIRKFPNSIIAG FT MFRFSEKPYFKAEAGAGKAPKVDFSK" FT sig_peptide 550376..550490 FT /locus_tag="CBO0462" FT /note="probabilty 0.992, with cleavage site probability FT 0.409 between residues 39 and 40" FT /inference="protein motif:SignalP:2.0" FT misc_feature 550376..550936 FT /note="Pfam match to entry PF04011 LemA, LemA family,score FT 296.1, E-value 4.5e-86" FT /inference="protein motif:Pfam:PF04011" FT misc_feature 550394..550453 FT /note="1 probable transmembrane helix predicted for CBO0462 FT by TMHMM2.0 at aa 7-26" FT /inference="protein motif:TMHMM:2.0" FT CDS 550955..551791 FT /transl_table=11 FT /locus_tag="CBO0463" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00359 SWALL:Q898T3 (EMBL:AE015937) (273 aa) fasta FT scores: E(): 1.1e-32, 47.1 38d in 276 aa" FT /db_xref="InterPro:IPR007621" FT /db_xref="UniProtKB/TrEMBL:A5HZ07" FT /protein_id="CAL82016.1" FT /translation="MENFFEKYLSRRRLTFVLIMTLIMTFPMLIKAQTNFPQPTSLKYV FT NDYVGVMDDATRGEIVAIGDELEKKTGAQAIVVVINSLGGSDIESYANNLFRQWGIGQR FT NKNNGLMILLSVNDRKWRVEVGKGLEGAITDSYSSRVMDDVAKPLLKEGKYGEAIKAAY FT STFVGDIGNERNVTLEQNDAIQASQQDSEGISWFGLIMCFIIFIIVIVVIIAAAGSGSN FT NRGYYGRDRYRRDHWDDDHFHHGGGFGGFGDGGSSGGDSGGFGGGSSGGGGSSGGW" FT sig_peptide 550955..551048 FT /locus_tag="CBO0463" FT /note="probabilty 0.998, with cleavage site probability FT 0.954 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(550991..551044,551543..551611) FT /note="2 probable transmembrane helices predicted for FT CBO0463 by TMHMM2.0 at aa 13-30 and 197-219" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 551189..551437 FT /note="Pfam match to entry PF04536 DUF477, Protein of FT unknown function (DUF477), score 100.0, E-value 4.7e-27" FT /inference="protein motif:Pfam:PF04536" FT CDS 552310..553170 FT /transl_table=11 FT /locus_tag="CBO0464" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00359 SWALL:Q898T3 (EMBL:AE015937) (273 aa) fasta FT scores: E(): 3.6e-39, 52.55 38d in 274 aa" FT /db_xref="InterPro:IPR007621" FT /db_xref="UniProtKB/TrEMBL:A5HZ08" FT /protein_id="CAL82017.1" FT /translation="MRKFINRNFNKLGLTVILIITLIISSPILTKAEKNFPKPTSLKYV FT NDYSRVIDDATKEYIVSVGNELEQKTGAQMTVVVIDSLEGSDIESYANSLFRQWGLGQK FT GKDNGVLILLSIKDKKWRVEVGRGLEGRITDIYSSRVMDDIAKPLLKEEKYGEAMKKAY FT SVFADDVAKEYNVTLEKNEKVKVPEKKKSGGGVIPAIIFIIILLSIFGGRGGRRGRRRT FT SIWDLIFLNSLFSNRRNRWDDDDDDGFGGGGFGGFGGFGGGSSGGGFGGFGGGSSGGGG FT SSGGW" FT sig_peptide 552310..552403 FT /locus_tag="CBO0464" FT /note="probabilty 1.000, with cleavage site probability FT 0.680 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(552343..552396,552886..552945) FT /note="2 probable transmembrane helices predicted for FT CBO0464 by TMHMM2.0 at aa 12-29 and 193-212" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 552544..552792 FT /note="Pfam match to entry PF04536 DUF477, Protein of FT unknown function (DUF477), score 91.5, E-value 1.7e-24" FT /inference="protein motif:Pfam:PF04536" FT repeat_region 553221..553250 FT /rpt_family="CB.6" FT /rpt_type=INVERTED FT /rpt_unit_seq="gtgtctcaaaattaaatctatttttagaca" FT /inference="ab initio prediction:REPuter" FT CDS 553444..554337 FT /transl_table=11 FT /locus_tag="CBO0465" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus anthracis mutt/nudix family FT protein ba3685 SWALL:Q81Y72 (EMBL:AE017035) (147 aa) fasta FT scores: E(): 1.4e-06, 35.29 38d in 136 aa" FT /db_xref="GOA:A5HZ09" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="InterPro:IPR020084" FT /db_xref="InterPro:IPR020476" FT /db_xref="UniProtKB/TrEMBL:A5HZ09" FT /protein_id="CAL82018.1" FT /translation="MLKRDTRVQIIIVENGKYILLKHWVKLENRYFWALPGGGRENGES FT LEEAAIREAKEETGLDIELFPLIYESLPPIKNSMYKNMVTFIGYPVKGEAKVGYDPEEE FT LKDLYGLVDIKWQDLRDKEGLTDVTIRDVGGILDRLQAENIEEEKIFLIYGQKDNVREY FT LVLNNINNIKDQCSSPYINKNVSDNEIKFLCLNKDNEYSFCGNNCSLNSKRCSWEVYLQ FT EILGIKLKNVTEQKKLGIFLYKKNNNFFKRNITLIPLKKEEKIYKKHTFIKEEDVLKEN FT ISEDLVRIFTFIKDNI" FT misc_feature 553450..553803 FT /note="Pfam match to entry PF00293 NUDIX, NUDIX FT domain,score 45.7, E-value 1.1e-10" FT /inference="protein motif:Pfam:PF00293" FT misc_feature 553744..553773 FT /note="PS00215 Mitochondrial energy transfer proteins FT signature." FT /inference="protein motif:ProSite:PS00215" FT CDS 554471..554953 FT /transl_table=11 FT /locus_tag="CBO0466" FT /product="putative membrane protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe0713 SWALL:Q8XMH6 (EMBL:AP003187) (154 aa) fasta FT scores: E(): 3, 21.93 38d in 155 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ10" FT /protein_id="CAL82019.1" FT /translation="MDVLKGILLILVGVTFVFWIVLTFINLWYKSKEGGKVLLNIKRGI FT ERNIMILMSLIIILFSLLNDNSNTYIEIVIGIVILYNGVERFEIMENGIFIEGNFKKWE FT DIESCEWHERLDHTLIIRGKEDVDYLRRFNTIKLKLKQEEQEQVFQIINKKIAQVS" FT misc_feature order(554489..554557,554600..554659) FT /note="2 probable transmembrane helices predicted for FT CBO0466 by TMHMM2.0 at aa 7-29 and 44-63" FT /inference="protein motif:TMHMM:2.0" FT CDS 555129..555653 FT /transl_table=11 FT /locus_tag="CBO0467" FT /product="putative membrane protein" FT /note="Similar to Thermotoga maritima hypothetical protein FT Tm0858 SWALL:Q9WZW2 (EMBL:AE001752) (168 aa) fasta scores: FT E(): 9.9e-15, 35.4 38d in 161 aa" FT /db_xref="InterPro:IPR024529" FT /db_xref="UniProtKB/TrEMBL:A5HZ11" FT /protein_id="CAL82020.1" FT /translation="MVQSKNKQLVRGALLIAVGLLLPYLFHGIKNAGSIFLPMHIPILI FT AGFILSPYFALAVGALTPLLSHLFTGMPPFPFVYVMVVELLTYGVVISILYNKKKMGIY FT PSLIIGMLSGRLANILCNYLVLHLIMAKPFKFPAVLAGLFVKGLPGIIIQLILIPILVK FT SLGKVELGKAV" FT sig_peptide 555129..555306 FT /locus_tag="CBO0467" FT /note="probabilty 0.761, with cleavage site probability FT 0.295 between residues 60 and 61" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(555156..555215,555234..555302,555345..555413, FT 555450..555518,555546..555614) FT /note="5 probable transmembrane helices predicted for FT CBO0467 by TMHMM2.0 at aa 10-29, 36-58, 73-95, 108-130 and FT 140-162" FT /inference="protein motif:TMHMM:2.0" FT CDS 555655..556245 FT /transl_table=11 FT /locus_tag="CBO0468" FT /product="putative AraC-family transcriptional regulator" FT /note="Similar to Thermoplasma volcanium hypothetical FT protein tv0916 tv0916 or tvg0944468 SWALL:Q97A94 FT (EMBL:AP000994) (245 aa) fasta scores: E(): 1.5e-05,27.95 FT 38d in 186 aa, and to Escherichia coli, Escherichia coli FT O157:H7, and Shigella flexneri ubiquinone/menaquinone FT biosynthesis methyltransferase ubie ubie or b3833 or z5355 FT or ecs4763 or sf3911 or s3843 SWALL:UBIE_ECOLI FT (SWALL:P27851) (251 aa) fasta scores: E(): 1.6e-05, 30 38d FT in 170 aa" FT /db_xref="GOA:A5HZ12" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:A5HZ12" FT /protein_id="CAL82021.1" FT /translation="MNDKEFFNNLADKWDDMCFHSKEKIEYILSKANLKEGDRVLDIGS FT GTGVLIPYLENIISNNGDIAAIDIAENMLKVSKEKNKYSNLKFIVGDFLEYKSKKTFNC FT ITAYSCYPHFKDKDKLAHRAYELLEEGGRLVIAHSESKEKINSRHKDVDHKIKSHILPK FT VKYTAELMEKHNFRTIYTEDNEECYIYIGARNK" FT misc_feature 555724..555852 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT CDS complement(556331..556570) FT /transl_table=11 FT /locus_tag="CBO0469" FT /product="putative DNA-binding protein" FT /note="Similar to Bacillus cereus transcriptional FT regulator, cro/ci family bc2181 SWALL:Q81E15 FT (EMBL:AE017005) (75 aa) fasta scores: E(): 1.6e-16, 73.52 FT id in 68 aa" FT /db_xref="GOA:A5HZ13" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5HZ13" FT /protein_id="CAL82022.1" FT /translation="MGIIVNLDVIMAKRKMSLKELAEKINLTNANLSILKNNKAKAIRF FT STLEAICRELNCQPGDILEYKEDPSEADKEDELN" FT misc_feature complement(556385..556552) FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 29.9, E-value 6.3e-06" FT /inference="protein motif:Pfam:PF01381" FT misc_feature complement(556460..556525) FT /note="Predicted helix-turn-helix motif with score FT 1599.000, SD 4.63 at aa 16-37, sequence FT MSLKELAEKINLTNANLSILKN" FT CDS complement(556591..557073) FT /transl_table=11 FT /locus_tag="CBO0470" FT /product="putative membrane protein" FT /note="Similar to Bacillus cereus hypothetical membrane FT spanning protein bc2987 SWALL:Q813G4 (EMBL:AE017007) (160 FT aa) fasta scores: E(): 0.00041, 30 38d in 170 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ14" FT /protein_id="CAL82023.1" FT /translation="MKEGFSIKFIKVLLMILIFGCTCMLGKYGFMTLFAPEKIPDGFPN FT IILFLFTTGVYIVVAWNLLKIVFSIDSTPFSLKNVKNFKIIGYLMLFLSLIDAIESIVN FT FKKSDDLVALGIILDKGIVGIRPSCILYLVLGIMALVLAEIFKKAVKIKNENDLTI" FT misc_feature complement(order(556636..556704,556762..556821, FT 556882..556941,556969..557037)) FT /note="4 probable transmembrane helices predicted for FT CBO0470 by TMHMM2.0 at aa 13-35, 45-64, 85-104 and 124-146" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 557214..557349 FT /note="intergenic repeat 1" FT CDS 557308..557442 FT /transl_table=11 FT /locus_tag="CBO0471" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZ15" FT /protein_id="CAL82024.1" FT /translation="MGVKTPSEAKNSVYYKYNNAIFVRALFFIDRKGITFISVTIVIF" FT misc_feature 557368..557436 FT /note="1 probable transmembrane helix predicted for CBO0471 FT by TMHMM2.0 at aa 21-43" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 557578..557712 FT /note="intergenic repeat 1" FT CDS 557819..559048 FT /transl_table=11 FT /gene="sbcD" FT /locus_tag="CBO0472" FT /product="nuclease subunit D" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 nuclease sbccd subunit d sbcd or b0398 or z0496 or FT ecs0448 SWALL:SBCD_ECOLI (SWALL:P13457) (400 aa) fasta FT scores: E(): 4.8e-08, 27.7 38d in 397 aa, and to Bacillus FT subtilis exonuclease sbcd homolog sbcd or bsu10640 FT SWALL:SBCD_BACSU (SWALL:P23479) (391 aa) fasta scores: E(): FT 2.5e-17, 39.9 38d in 406 aa" FT /db_xref="GOA:A5HZ16" FT /db_xref="InterPro:IPR004593" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:A5HZ16" FT /protein_id="CAL82025.1" FT /translation="MRILHTSDWHLGKNLEGFSRMDEQERFIEDFINIVDKNNIDMVII FT AGDIYDNGNPPARAEKMFYDCIKKISNKGERLVLIIAGNHDNPERLVAASSLAYDEGII FT LMGTPKTIVPKGKYGNFKVINSDLACLEIGVKEEKAVIISLPYPSEKRLNEILSKEMDN FT DEDRRKTYSERIGDIFSNLQEKYYKDNTVNLAISHIFVNGSEETDSERPIQLGGSLSVD FT VDKLPKKAQYIGLGHLHKPQKVRGIDNAYYSGSPLPYSKSERGYSKGCKIIDVHPGEKA FT VIEEVYFNNYKPIEVWHCNGIKEAINKCEENKEKDMWLYLHIKTKEYISTEDIKALKEI FT KKDIVEIVPEIEEKREETFNGNIKEKSMAELFKSFYLNQRGIEASEELMDLFLSIAQEE FT DEYETEETCD" FT misc_feature 557819..558541 FT /note="Pfam match to entry PF00149 FT Metallophos,Calcineurin-like phosphoesterase, score 48.5, FT E-value 1.6e-11" FT /inference="protein motif:Pfam:PF00149" FT CDS 559023..562553 FT /transl_table=11 FT /gene="sbcC" FT /locus_tag="CBO0473" FT /product="exonuclease" FT /note="Similar to Escherichia coli exonuclease sbcc sbcc or FT rmua or b0397 SWALL:SBCC_ECOLI (SWALL:P13458) (1048 aa) FT fasta scores: E(): 8.6e-10, 21.48 38d in 1210 aa" FT /db_xref="GOA:A5HZ17" FT /db_xref="UniProtKB/TrEMBL:A5HZ17" FT /protein_id="CAL82026.1" FT /translation="MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSIL FT DAITMALYGDIARDSTQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKT FT TAARLVKNTYEEEEIIADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKS FT RRDMLERIFGLEKYGKKLLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYE FT NLLKEKSKIAKEKEESNKLYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKRIKVEK FT GKNALSVKPYIDELSKIESDRNINEEELQTAMEQLRNIDLNLKNIEEEYKKASEDKEEK FT IPLLMQKENNLLQAIEIKKKVEVIKRERADLVQKYKEKESLIRNKNIDKKHIEENINKI FT SKEVKLKEEEINSLKIDGDRREKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLKEYE FT LKYKDTLETQRDINKKLEYVSGKREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKIN FT DRKQELEKNLKEKQVVKLNLEKQHKEILEILKLKEETIVSLEEKIKDIEKMDMASILAT FT NLKDQEPCPVCGSMHHIKLAKKVDIKELEILKEDHRNAFKKLENIKIEEKEKNILLISV FT EKEEELILEELENLKEQLKGRNLEDLRGELQKEKNDFEKLNENIKDWEKEKLILEENIN FT KLQKEKNDIDKEEAKNHEAISKEKELIASIKKDMEEREILFKEKEKEYLNLKEEIKVSN FT VEEEISRVRASDKKIEEYNKVIKNEREILESENNKREETIKQINIMEIELGKIIEAGKE FT KKNFIDKEEEEIKKLNVGEISIEHLDQVKKSIGNIKEKEEILKSKLELEGKNREILWKN FT KISKEQIKINLEKLHNEKYIQLNKVLEENKFHTLEDAKLMLICKEEIKELEKEIEEFEK FT EYNSLNINIERVNKKLKGERIEEGSWKDIRLKKENKEKELEDIIKNIVIEEKLISDMEN FT NIKSLKNLLDEKEKVAHKKALLEDIDKLVQGNKFVEFVAMNQLEYIVFEASKRLKDITR FT GRYALELDCNGNFTMRDDFNGGGIRPTNTLSGGETFLTSLALALALSSQIQLKGSSPLE FT FFFLDEGFGTLDSELLDTVMTSLENLRSDRLSVGIISHVEELKNRVPIKLIVDPAVPGE FT GGSKIKIEYS" FT misc_feature 559023..559166 FT /note="Pfam match to entry PF02463 SMC_N, RecF/RecN/SMC N FT terminal domain, score 19.7, E-value 1.8e-05" FT /inference="protein motif:Pfam:PF02463" FT misc_feature 559125..559148 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 562581..563129 FT /transl_table=11 FT /locus_tag="CBO0474" FT /product="putative ADP-ribose pyrophosphatase" FT /EC_number="3.6.1.13" FT /note="Similar to Bacillus subtilis ADP-ribose FT pyrophosphatase nudf or bsu23610 SWALL:ADPP_BACSU FT (SWALL:P54570) (185 aa) fasta scores: E(): 0.00014, 27.54 FT id in 167 aa, and to Homo sapiens ADP-sugar pyrophosphatase FT ysa1h nudt5 SWALL:NUD5_HUMAN (SWALL:Q9UKK9) (219 aa) fasta FT scores: E(): 2.2e-13, 35.91 id in 181 aa" FT /db_xref="GOA:A5HZ18" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="UniProtKB/TrEMBL:A5HZ18" FT /protein_id="CAL82027.1" FT /translation="MKKLEEKILYEGKWISFKKISYLNNEEKLLKWEAVERTNTTKAVV FT IVAKLVPTERYVFIKQYRPAIDNYVIGFPAGLLEQEDVEAEAKRELKEETGYVGRVIDI FT SPEIRPNPALLTDYTILVQMEIDENDELNKNPKQELEPSEDIEVMLMSKEESRDFLIEQ FT KNNGVDVGVGPWYIFGFKL" FT misc_feature 562698..563066 FT /note="Pfam match to entry PF00293 NUDIX, NUDIX FT domain,score 19.7, E-value 0.0054" FT /inference="protein motif:Pfam:PF00293" FT CDS 563940..564791 FT /transl_table=11 FT /locus_tag="CBO0475" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani transporter ctc01333 FT SWALL:Q895E3 (EMBL:AE015940) (289 aa) fasta scores: E(): FT 6.5e-43, 38.21 38d in 280 aa" FT /db_xref="InterPro:IPR003740" FT /db_xref="InterPro:IPR019264" FT /db_xref="UniProtKB/TrEMBL:A5HZ19" FT /protein_id="CAL82028.1" FT /translation="MHFKKENVKRLLLVMMGSLIYAIGVNMFLIPHKLLSGGVAGIAIM FT LQYLTDIQSGYYILLINIPIFLIAFKEVDLDFGIFSFVGMISMSSFLILSRNYMDFYAM FT NDILISCICGGVLSGAGMGLIFRNRASQGGTDVISVLVKRKFGIKISTIDFMINCVVVT FT IGALIGSFEVAVYTMISMFVKSQVMGKVIEGFDGKKILFVVTDHDAEIKKQLVERLGVG FT ATIMYGEGAYSGAKRKIIYCIMTTQQIVKAKKIIEDFDEHALISVSNTTECQGGGFKAA FT AF" FT sig_peptide 563940..564003 FT /locus_tag="CBO0475" FT /note="probabilty 0.780, with cleavage site probability FT 0.320 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature 563967..564215 FT /note="Pfam match to entry PF02588 DUF161, Uncharacterized FT BCR, YitT family COG1284, score 88.9, E-value 1.1e-23" FT /inference="protein motif:Pfam:PF02588" FT misc_feature order(563973..564032,564090..564149,564168..564221, FT 564249..564317,564408..564476) FT /note="5 probable transmembrane helices predicted for FT CBO0475 by TMHMM2.0 at aa 12-31, 51-70, 77-94, 104-126 and FT 157-179" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 564258..564503 FT /note="Pfam match to entry PF02588 DUF161, Uncharacterized FT BCR, YitT family COG1284, score 66.4, E-value 6.4e-17" FT /inference="protein motif:Pfam:PF02588" FT CDS complement(564883..565044) FT /transl_table=11 FT /locus_tag="CBO0476" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein Cac3540 SWALL:Q97DD8 (EMBL:AE007850) (53 aa) fasta FT scores: E(): 1.8e-13, 60 38d in 50 aa" FT /db_xref="InterPro:IPR011437" FT /db_xref="UniProtKB/TrEMBL:A5HZ20" FT /protein_id="CAL82029.1" FT /translation="MDHNNSIGCSVHECKYHAQNIDYCTLNKIQVTKHTHEAESVESTD FT CGSFEFKH" FT CDS 565256..565621 FT /transl_table=11 FT /locus_tag="CBO0477" FT /product="ArsR-family transcriptional regulator" FT /note="Similar to Synechocystis sp. transcriptional FT repressor smtb homolog smtb or ziar or sll0792 FT SWALL:SMTB_SYNY3 (SWALL:Q55940) (132 aa) fasta scores: E(): FT 7.6e-17, 37.06 38d in 116 aa" FT /db_xref="GOA:A5HZ21" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR018334" FT /db_xref="UniProtKB/TrEMBL:A5HZ21" FT /protein_id="CAL82030.1" FT /translation="MDKEKQIDTCTCNIIHHDVVDKVKDNMIEEDKAQDLGDFFKVLSE FT PTRIKILYALSSSEMCVCDISNLLNMTQSAVSHQLKVLRTARLIKFRKEGKVVYYSLDD FT SHVENVFKQGLEHIMHR" FT misc_feature 565373..565606 FT /note="Pfam match to entry PF01022 HTH_5, Bacterial FT regulatory protein, arsR family, score 113.0, E-value FT 6.1e-31" FT /inference="protein motif:Pfam:PF01022" FT misc_feature 565433..565498 FT /note="Predicted helix-turn-helix motif with score FT 1639.000, SD 4.77 at aa 60-81, sequence FT MCVCDISNLLNMTQSAVSHQLK" FT misc_feature 565436..565492 FT /note="PS00846 Bacterial regulatory proteins, arsR family FT signature." FT /inference="protein motif:ProSite:PS00846" FT CDS 565697..567925 FT /transl_table=11 FT /locus_tag="CBO0478" FT /product="putative zinc-transporting ATPase" FT /EC_number="3.6.3.5" FT /note="Similar to Synechocystis sp. zinc-transporting FT ATPase ZiaA or slr0798 SWALL:ATZN_SYNY3 (SWALL:Q59998) (721 FT aa) fasta scores: E(): 7.1e-108, 44.69 38d in 745 aa,and to FT Helicobacter pylori cadmium, zinc and cobalt transporting FT ATPase CadA or hp0791 SWALL:HMCT_HELPY (SWALL:Q59465) (686 FT aa) fasta scores: E(): 8.6e-88, 39.43 id in 738 aa" FT /db_xref="GOA:A5HZ22" FT /db_xref="InterPro:IPR001366" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006121" FT /db_xref="InterPro:IPR006404" FT /db_xref="InterPro:IPR006416" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR023300" FT /db_xref="UniProtKB/TrEMBL:A5HZ22" FT /protein_id="CAL82031.1" FT /translation="MIIKKKLLLKGLHCANCATKIERAVQKLNIIEEANYNFNNSTLII FT NLEETHKDSIIKTIQEIVDRIEPGVKVVDKENLKRTVVHAPVKNSSNLKMQNNKEENLK FT LDKKENSYEHNHDHSHGHSHDGEDSDELEKKTLIRIISGVVLLILATVLKSKETLSIGL FT YLTSYVLIGGKVILSSIRNISKGQVFDENFLMAVATVAAIGVKQYPEAVAVMLFYEVGE FT FLQDKAVNKSRKSITALMNIRPDYANLVRGEDIEVVSPEDINIDDIIMVKPGEKIPLDG FT IVVEGQSFVDTSAITGESLISEVSKDSNVLSGYINKNGVIKIKVTKTFGESTVSKILEL FT TENASATKANTEKFITKFARYYTPVVVFAALALAVIPTLILKDPDISKWIYRAAVFLVV FT SCPCALVISIPLSFFAGIGGASKKGVLIKAGTALEALNDADTIVFDKTGTLTKGVFKVS FT KIDSEEGVNTEELIEYAAYVESYSNHPIAKSILKYYEKTIDNKRIEGYEEIVARGVTAY FT IDGKKVYAGNNKLMEELNINYKKAQEDGVILYIALEDKYIGYIVINDEIKKDSKETIKS FT LKDIGIKKAAMLTGDRKSTANNIGTFLGMDEIYSELLPQEKVEKMQSLKSKTSKDGKIV FT FVGDGVNDAPVLAMSDIGVSMGGLGSDAAIEASDLVLMSDEPSKLVDAIKIARKTHKIV FT WQNIIIVLIIKFAVLALAVMGKSTMWMAVFADVGVALIAVINALRILK" FT misc_feature 565712..565912 FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 32.2, E-value FT 1.3e-06" FT /inference="protein motif:Pfam:PF00403" FT misc_feature order(566102..566155,566168..566236,566768..566836, FT 566879..566947,567773..567841,567851..567919) FT /note="6 probable transmembrane helices predicted for FT CBO0478 by TMHMM2.0 at aa 136-153, 158-180, FT 358-380,395-417, 693-715 and 719-741" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 566333..567001 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 256.3, E-value 4.4e-74" FT /inference="protein motif:Pfam:PF00122" FT misc_feature 567011..567676 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 91.5, E-value 1.8e-24" FT /inference="protein motif:Pfam:PF00702" FT misc_feature 567029..567049 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT /inference="protein motif:ProSite:PS00154" FT misc_feature 567824..567847 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT tRNA 568345..568419 FT /gene="tRNA Glu (CTC)" FT /note="Cove score 70.26" FT /inference="nucleotide motif:tRNAscanSE" FT CDS 568546..568782 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0479" FT /product="putative prophage protein (partial)" FT /note="Similar to Lactobacillus plantarum prophage lp1 FT protein 18 lp_0641 SWALL:Q88YV1 (EMBL:AL935253) (295 aa) FT fasta scores: E(): 1.4, 23.61 38d in 72 aa" FT /note="Also similar to N-terminal region of CBO2550 (82.8 FT id)." FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82032.1" FT repeat_region complement(568619..568650) FT CDS join(568746..568841,568859..568954) FT /transl_table=11 FT /locus_tag="CBO0479A" FT /product="putative prophage protein (partial)" FT /db_xref="UniProtKB/TrEMBL:A5HZ24" FT /protein_id="CAL82033.1" FT /translation="MLCNTSLFKSFLEEYNGCEARMMAVLNVSMKIMKGELEFIRCGKY FT DYCKITKELKEIIHYKKL" FT repeat_region complement(568761..568792) FT repeat_region complement(568912..568945) FT CDS 569663..570010 FT /transl_table=11 FT /locus_tag="CBO0480" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein Cac1923 SWALL:Q97HT4 (EMBL:AE007698) (110 aa) fasta FT scores: E(): 0.00019, 36.27 38d in 102 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ25" FT /protein_id="CAL82034.1" FT /translation="MTPIEIMEKIGACQRGLTKGNIELKALGVKKARAEHDYRIALRKE FT ILRLRQLENQPATIINDLAKGKEDIAKLRLERDIAETNYSVYIESMRNLRLEIEAYRSF FT LTWERVELKNT" FT CDS complement(570029..570178) FT /transl_table=11 FT /locus_tag="CBO0481" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe0253 cpe0253 SWALL:Q8XNS9 (EMBL:AP003186) (67 FT aa) fasta scores: E(): 0.0044, 76.92 38d in 26 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ26" FT /protein_id="CAL82035.1" FT /translation="MSNLNSLELQNLPHLIGAHETIADKLNKIRVKQSIIIYIRKEEVF FT FTSL" FT CDS 570696..571505 FT /transl_table=11 FT /locus_tag="CBO0482" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus halodurans hypothetical protein FT Bh1562 SWALL:Q9KCK9 (EMBL:AP001512) (268 aa) fasta scores: FT E(): 4.7e-46, 45.14 38d in 268 aa" FT /db_xref="InterPro:IPR021328" FT /db_xref="UniProtKB/TrEMBL:A5HZ27" FT /protein_id="CAL82036.1" FT /translation="MKISNIKEITLFEHHFWLQILGDHSRFILNSLSPKEKSFIEEANR FT FKNLFDNLLKKSKQSLSEEELFALNNHAYNAAMKIREFKLDIIDRQITDKIVISLPPTF FT INHMVNEVDEYIFILTKLMKGNVSNIGPIHLHLLWLPDGAGHASNIASSLDITEKELIK FT KSNQYSKKFNNLYLRTIEYNGYTRTGICDFPALDSLNNNADETMSCFKEFLNELKKGVI FT EKKILGTIVPLVPDHMFREECYYLTKLSMVSNIKKPECDPTKSRVES" FT CDS 572462..573838 FT /transl_table=11 FT /locus_tag="CBO0483" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens probable FT phosphate starvation inducible protein cpe1665 SWALL:Q8XJT8 FT (EMBL:AP003191) (459 aa) fasta scores: E(): 2.2e-118, 69.71 FT 38d in 459 aa" FT /db_xref="GOA:A5HZ28" FT /db_xref="InterPro:IPR003714" FT /db_xref="InterPro:IPR006596" FT /db_xref="UniProtKB/TrEMBL:A5HZ28" FT /protein_id="CAL82037.1" FT /translation="MKLTYVLDTNVILYSPGAIFSFADNDVVIPEVVLEELDSFKKNNY FT DLGANARHAARIIDKLRKDGSLIDGIVLPGGGTLRVEMNHYDVKLPPSWDKNKPDNRII FT QVCKGLKEKGEEVVLITKDTFERIKADTINIDVEDFYEKVVPEYESQYKGRCDAFASHS FT TLESFYKNKYMDVESLFFYSEEKNDYYKADININEFILIKSMENPKQTALGRYNGEKVV FT PLFYKDVKPLGISPRNIGQKFMLEAFLTDSKNAPLVIVKGPAGTAKTLFSLATGLHKVM FT EEGEDGYRKILICRPNVTMDEDIGFLPGTEEEKIMPFMRPIFDNLEILVDSDEKERYKN FT EKELYDKIKELFDRRIITTEAVAYLRGRSIVKNWVIIDEAQNLTPKQVKAVITRVGQGT FT KLILVGDPDQIDQPFLDSRSNGLCYASEKMKGSKLCYQVTLKDHECERSPLAYEGAKRL FT " FT misc_feature 572819..573820 FT /note="Pfam match to entry PF02562 PhoH, PhoH-like protein, FT score -21.7, E-value 1.6e-11" FT /inference="protein motif:Pfam:PF02562" FT CDS 574106..575110 FT /transl_table=11 FT /locus_tag="CBO0484" FT /product="putative exported protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00791 SWALL:Q897E9 (EMBL:AE015938) (335 aa) fasta FT scores: E(): 1.1e-77, 64.47 38d in 335 aa" FT /db_xref="InterPro:IPR018711" FT /db_xref="UniProtKB/TrEMBL:A5HZ29" FT /protein_id="CAL82038.1" FT /translation="MENKEKKSKNKKFSFKIFLYFIIFELFFTAATAPFIIFHGPFKNV FT KKTMVGAAMTTLKHQYIAKTFLSDAKIKEILGEDSIQTIKQDKNSVLKFENKHDSTIER FT YDISYGKKFKGYMLVVHDPSRVKVGYSSKLPVQGELTSQIARNKRAVAAINAGGFTDKS FT ANSKWTGTGGNVEGVIISKGEVKYNSNKQGEFTGDVAAITKKGALVVGKHSIQELKDLN FT VQEAITFGPALVVKGQGTITSGDGGWGMAPRTAIGQREDGAILMLVIDGRQASSLGATL FT KDVQDIMLQYDAYTATNLDGGSSTTMYHEGEVINNPANSLGERSVPSILYVEP" FT sig_peptide 574106..574259 FT /locus_tag="CBO0484" FT /note="probabilty 0.758, with cleavage site probability FT 0.343 between residues 52 and 53" FT /inference="protein motif:SignalP:2.0" FT misc_feature 574154..574222 FT /note="1 probable transmembrane helix predicted for CBO0484 FT by TMHMM2.0 at aa 17-39" FT /inference="protein motif:TMHMM:2.0" FT CDS 575120..576136 FT /transl_table=11 FT /locus_tag="CBO0485" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00792 SWALL:Q897E8 (EMBL:AE015938) (343 aa) fasta FT scores: E(): 1e-48, 40.81 38d in 343 aa" FT /db_xref="InterPro:IPR015943" FT /db_xref="UniProtKB/TrEMBL:A5HZ30" FT /protein_id="CAL82039.1" FT /translation="MKVVKKIILWVMISLTLQFAGLFYIDKYFLASGGTRIKAKKVTNT FT GTENKDYDVNIPENVEELDVSFNGKYISYFKDNKLNIISTKNGEKKNIEFDSKKDKLEY FT IWLSDRNRIIYAENKEGQVLLNSYDVDKDQKDKICEFNFESSSAKIEDIKAAPLMNLIY FT VKVNVGGNNNRLYSVNIMKEKDRIDIMTEAVGDMNIIPHEDILIYEDKINKKIFATHNE FT SSINIGGVTSPKLLSIDDNDNVYIGELKEDEVVKIYYGNVKNNTSTWKALDIPNGAKVK FT DIYVSPLGSVYVNDDLKGVIKEISTGKETKYSGVMMKMYIDGVASISDGKLVKTKFK" FT misc_feature 575138..575194 FT /note="1 probable transmembrane helix predicted for CBO0485 FT by TMHMM2.0 at aa 7-25" FT /inference="protein motif:TMHMM:2.0" FT CDS 576447..576629 FT /transl_table=11 FT /gene="SagA" FT /locus_tag="CBO0486" FT /product="putative cytolysin" FT /note="Similar to Streptococcus iniae bacteriocin-like FT prepropeptide SagA SWALL:Q8GP18 (EMBL:AF465842) (54 aa) FT fasta scores: E(): 6.2e-06, 50 38d in 52 aa, and to FT Streptococcus pyogenes, Streptococcus pyogenes streptolysin FT S associated protein SagA or spy0738 or spym18_0799 or FT spym3_0480 or sps1374 SWALL:O69194 (EMBL:AF067723) (53 aa) FT fasta scores: E(): 0.00037, 42 38d in 50 aa" FT /db_xref="InterPro:IPR019891" FT /db_xref="UniProtKB/TrEMBL:A5HZ31" FT /protein_id="CAL82040.1" FT /translation="MKDMLKFNEHVLTTTNNSNNKVTVAPGSCCCCSCCCCVSVSVGGG FT SASTGGGAAAGQGGN" FT sig_peptide 576447..576585 FT /gene="SagA" FT /locus_tag="CBO0486" FT /note="probabilty 0.999, with cleavage site probability FT 0.381 between residues 47 and 48" FT /inference="protein motif:SignalP:2.0" FT CDS 576794..577750 FT /transl_table=11 FT /gene="SagB" FT /locus_tag="CBO0487" FT /product="putative cytolysin-associated protein" FT /note="Similar to Streptococcus equisimilis SagB FT SWALL:Q93SL4 (EMBL:AY033399) (316 aa) fasta scores: E(): FT 5.8e-45, 44.17 38d in 292 aa" FT /db_xref="GOA:A5HZ32" FT /db_xref="InterPro:IPR000415" FT /db_xref="InterPro:IPR020051" FT /db_xref="UniProtKB/TrEMBL:A5HZ32" FT /protein_id="CAL82041.1" FT /translation="MLLKNLKKQKVKKQRNTDIGNKMLVHFNTQYSSISPYVDSTVIKT FT PDTIIKGSLYSKDNRFLSEEYLLNYRTNNDNLGFRMGVSSFFQKDAALTFVNLDMEEDG FT QNVIELPPSKNIRVGLSTAIKSRRSVRGYSSKSMSLNDVANIFYYTQGICDEVEPYNLE FT GNKKKIKLRANPSAGGLYPIQLYVYMKNIKDLKDGIYTYYPYSHGLKPIEVNKELLKVD FT NFAEFGVLNAENANLIVFYVYNFLKNSRKYGDAGFSYALIETGEMAQNLQLVSTALGYG FT ACDIGGYEKQYIEEVLDIDGVLKHVVHMTVVGWEQGD" FT misc_feature 577163..577732 FT /note="Pfam match to entry PF00881 FT Nitroreductase,Nitroreductase family, score 34.0, E-value FT 3.7e-07" FT /inference="protein motif:Pfam:PF00881" FT CDS 577754..578836 FT /transl_table=11 FT /gene="sagC" FT /locus_tag="CBO0488" FT /product="putative cytolysin-associated protein" FT /note="Similar to Streptococcus iniae SagC SWALL:Q8GP16 FT (EMBL:AF465842) (354 aa) fasta scores: E(): 2.6e-38,36.33 FT 38d in 355 aa" FT /db_xref="GOA:A5HZ33" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR019892" FT /db_xref="UniProtKB/TrEMBL:A5HZ33" FT /protein_id="CAL82042.1" FT /translation="MKNNTIYRLSNNLRIYDNGENEIRFRSGLWNYNEAVLDLSAETEN FT FTKSFRKVIDNLKNNKGISVKDLDGYELNNEEKNNLISIIDSLNEAGMLCSEDEKDNDF FT AMSKVLLGDFSYNLNKKEENNQKLLFISDNDYAKQTAKNLSDGMNTNLDLYSKENIDNI FT ISKDLTSNLDALEKKSNIEDIKNQLKDYSAILICMSHINMNLFRNINRVSIELKKPIIM FT SFIDGPFITILSTLPPKTGCLECFEQRILSRLEDHVLYHKFIESDFKPSDKSHKSIIPL FT LNIMTNMVISEGFLINNFNTCKIEGRVLSIFVPTLEIQSQDLLRVPFCPACGNISKAKL FT KEINISTRNIVDGILEDINS" FT CDS 578852..580210 FT /transl_table=11 FT /gene="sagD" FT /locus_tag="CBO0489" FT /product="putative cytolysin-associated protein" FT /note="Similar to Streptococcus iniae SagD sagD FT SWALL:Q8GP15 (EMBL:AF465842) (453 aa) fasta scores: E(): FT 9.8e-91, 51.54 38d in 454 aa" FT /db_xref="InterPro:IPR003776" FT /db_xref="UniProtKB/TrEMBL:A5HZ34" FT /protein_id="CAL82043.1" FT /translation="MIKFSPSFNNILENFKSLAGNQSGILEAACMPVVNFNSDVSLKSI FT TGNMPDYHKQVFNKDVSMQYHIMGYGSHYEEALIKYTGESIERYSSIMGPTLLKDKIVY FT ESYKELSKNNKVMPLKYIDVFTENQIKKAKELNVSICDKKVEEDDIIGWIKCPSLLKKG FT KEIYVPAKMMFVGYEEDKNKGEMTFIPSFSTGTAAHKSLKKALLNALVEYIQIDSFMIN FT WHTKGKCSLVKIDDENVLKVLEDVNLGEKSPYEIIPLYMSLEECPIHNFGVFLRRKDNK FT LPYLLFGIQGGLDASHALTRGIMEAASISYGAYFNAIYNKDMLNNVIKDDHKFLDLDSN FT VLYYSLPNKIEEKNKLIEDFIGDEITLSSLNKLNIKGVDEQIKTLLNYLKDISEYAVYL FT DLTPPETRDKGWYVMRAMIPELIEMCIPEFPFENHPRMKKYGGVINEYPHPMP" FT CDS 580185..580823 FT /transl_table=11 FT /gene="sagE" FT /locus_tag="CBO0490" FT /product="putative cytolysin-associated protein" FT /note="Similar to Streptococcus iniae SagE SWALL:Q8GP14 FT (EMBL:AF465842) (220 aa) fasta scores: E(): 1.9e-18,32.05 FT 38d in 209 aa" FT /db_xref="GOA:A5HZ35" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5HZ35" FT /protein_id="CAL82044.1" FT /translation="MNIRTQCLNLLILLVTFNPIVLAQLFLNNEKSYNESLKRSFKALA FT IIYTIILTSIFIISKERFYINIDNNYYGYIIAVMFVPITIISEIAVGYIMLGISNKTIP FT KFKISLVFTKTNINVIILSVFIGICEEFAYRQLWFNILFKDFKMNIAIVLIITSFVYAL FT NHIFLGKQVFSQKMVAGLIYGALFYFSGFNIIVPIITHSLENIAILLKG" FT misc_feature order(580203..580262,580305..580358,580395..580463, FT 580506..580571,580632..580685,580713..580781) FT /note="6 probable transmembrane helices predicted for FT CBO0490 by TMHMM2.0 at aa 7-26, 41-58, 71-93, FT 108-129,150-167 and 177-199" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 580533..580820 FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 33.6, E-value 4.6e-07" FT /inference="protein motif:Pfam:PF02517" FT CDS 580831..581559 FT /transl_table=11 FT /gene="sagF" FT /locus_tag="CBO0491" FT /product="putative cytolysin-associated protein" FT /note="Similar to Streptococcus iniae SagF SWALL:Q8GP13 FT (EMBL:AF465842) (229 aa) fasta scores: E(): 0.15, 26 38d in FT 150 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ36" FT /protein_id="CAL82045.1" FT /translation="MNLYLKILVFLLMTIYIVILYLPMNINYKKFKFTKKLCLNLSGAI FT GTSPTNCWCLMKYVHLLIIGVIPIACFFYRGIVKNYSLYTETNIIKSFILIILSFIGIL FT EISFFMIIVVVSYLMKKDSRKEMSNVSWVKFNKKYPFYTGILKPIMYTVFEILLYYYVM FT FYVINDYLKVSVMYSILGIAILYSVSKLAFTKNKEQALIYGIWAFALNIIGSCIMIYSN FT SIILTFILYLLYSFVIAFKE" FT misc_feature order(580840..580908,581005..581064,581107..581175, FT 581251..581319,581347..581409,581428..581487, FT 581497..581550) FT /note="7 probable transmembrane helices predicted for FT CBO0491 by TMHMM2.0 at aa 4-26, 59-78, 93-115, FT 141-163,173-193, 200-219 and 223-240" FT /inference="protein motif:TMHMM:2.0" FT CDS 581868..582800 FT /transl_table=11 FT /gene="sagG" FT /locus_tag="CBO0492" FT /product="putative cytolysin ABC transporter, ATP-binding FT protein" FT /note="Similar to Streptococcus iniae SagG SWALL:Q8GP12 FT (EMBL:AF465842) (307 aa) fasta scores: E(): 2.7e-49,50.47 FT 38d in 313 aa" FT /db_xref="GOA:A5HZ37" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZ37" FT /protein_id="CAL82046.1" FT /translation="MNIVEIKNLEKKFKNNTAVNNINLTVKEGQVFGFLGPNGAGKSTT FT INMICGLLTPTKGEIFILGKKMDNKAKDLKNNIGIVPQDIAIYEDLTAYENVAFFGGLY FT GVRGQELKERAKETLEFVGLLDRAKDFPYKFSGGMKRRLNIACALVHQPKLIIMDEPTV FT GIDPQSRNHILESIKKLNERGCTIIYTSHYIEEVEQLCTDIAIIDKGTIIAKGKKDELV FT EKYSDLNMVVINIKDSTKVNIKALKSIEGVVEVNIKENTIEITNKSSDNLDDIIMYFLN FT NKIKIKNIENKHSDLETIFLKLTGKKLRD" FT misc_feature 581952..582497 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 231.0, E-value 1.8e-66" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 581973..581996 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 582138..582185 FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT /inference="protein motif:ProSite:PS00225" FT misc_feature 582270..582314 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 582803..583936 FT /transl_table=11 FT /gene="sagH" FT /locus_tag="CBO0493" FT /product="putative cytolysin ABC transporter" FT /note="Similar to Streptococcus iniae SagH sagH FT SWALL:Q8GP11 (EMBL:AF465842) (375 aa) fasta scores: E(): FT 1e-37, 30.58 38d in 376 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ38" FT /protein_id="CAL82047.1" FT /translation="MNSMKILNILKKEILENFRDKKAMFLMTLFPMLLITILGTVFSGN FT FASTINIPEINVMYSINKDVKIDKNFKDFTKEIQKNMKVNFKETKEEKDALEKISNGKA FT DVYIKIPNDKKIYIYENNVRAFNSQLVSTLLDTFVDKVNMTKEVSSKNPMALSKIKVDN FT SPNFVNTKTIDGKNSPRGIDYYAVTMLTMTILYGTAVGAMSIASEIKRRTYKRLICSNT FT SPLKILFSKILASFLVIAFQSFLIYLFSKYILGTNWGNNKLALISVVASLIFMAVSAGV FT CIANTIKNEGVMSIIIYMFVPVLTFLGGGYIPLDTIGSKMLNSASNISPLKWSNDAIFK FT IIFGNDLSIFGTTMLINLGAGVLFLLIAILFPRKDVV" FT sig_peptide 582803..582941 FT /gene="sagH" FT /locus_tag="CBO0493" FT /note="probabilty 0.995, with cleavage site probability FT 0.352 between residues 47 and 48" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(582875..582943,583352..583420,583481..583549, FT 583592..583660,583673..583741,583847..583915) FT /note="6 probable transmembrane helices predicted for FT CBO0493 by TMHMM2.0 at aa 25-47, 184-206, 227-249,264-286, FT 291-313 and 349-371" FT /inference="protein motif:TMHMM:2.0" FT CDS 583938..585080 FT /transl_table=11 FT /gene="sagI" FT /locus_tag="CBO0494" FT /product="putative cytolysin ABC transporter" FT /note="Similar to Streptococcus iniae SagI sagI FT SWALL:Q8GP10 (EMBL:AF465842) (372 aa) fasta scores: E(): FT 2.3e-37, 32.04 38d in 362 aa" FT /db_xref="GOA:A5HZ39" FT /db_xref="InterPro:IPR000412" FT /db_xref="UniProtKB/TrEMBL:A5HZ39" FT /protein_id="CAL82048.1" FT /translation="MKQIFLLTKSILKRTFRKKSNIITFILLPLLAVFIALFLNASGNS FT YSKIGVVDLNESYLSKDMIKSIDAKKNFVVVKISKNNMNKLLLDKRVDCVVVIPKDFNK FT DIIDGNFKKLDIISVRGEDITSWIKNYLNYYIDTLNNISVASNKNEKDFKAIYDGYKKQ FT DLKLNYKAIGDKTKTKSVTKQSIGLLLVFMLIASSTASSFILKDKYNKTYYRIFCSNTS FT KSKYIIANVIANFVIFLIQIFVILFMSIYVLKLNFYIDTSIMFIILCSFGFVSIGFGII FT IAAFSKSLNQSSYLSNILITPTCMLSGCFWPLDMMPSFMQKLANIFPQTWVLKTIDSLQ FT QGKSFNEVISYLGIVILFALAFFVVGILKLTKDENLKSIF" FT sig_peptide 583938..584058 FT /gene="sagI" FT /locus_tag="CBO0494" FT /note="probabilty 1.000, with cleavage site probability FT 0.305 between residues 45 and 46" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(583998..584066,584493..584552,584613..584681, FT 584724..584792,584811..584879,584979..585047) FT /note="6 probable transmembrane helices predicted for FT CBO0494 by TMHMM2.0 at aa 25-47, 190-209, 230-252,267-289, FT 296-318 and 352-374" FT /inference="protein motif:TMHMM:2.0" FT CDS 585208..585858 FT /transl_table=11 FT /locus_tag="CBO0495" FT /product="putative membrane-associated protease" FT /note="Similar to Clostridium tetani protein with metal FT dependent protease domain ctc00793 SWALL:Q897E7 FT (EMBL:AE015938) (213 aa) fasta scores: E(): 8.2e-48,59.33 FT 38d in 209 aa" FT /db_xref="GOA:A5HZ40" FT /db_xref="InterPro:IPR008915" FT /db_xref="UniProtKB/TrEMBL:A5HZ40" FT /protein_id="CAL82049.1" FT /translation="MDLNYRILSKILIIPAILVGLTVHEFAHAYVADKLGDKTPKFQGR FT LTLNPFSHIDIIGFIMILLIGFGWAKPVQINPSALKRGYKDEIKVSVAGVTANVITAFL FT FALLTAFLLKLNLVNFGDITSLGGIIGLILNYIVRINCMLAIFNLMPIPGLDGFDILRD FT LWPKTFYKISDVIYRYQMIILLIFVVTPISSFLVGIPTNFLHYSFMKIAMTIF" FT sig_peptide 585208..585292 FT /locus_tag="CBO0495" FT /note="probabilty 0.861, with cleavage site probability FT 0.719 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(585226..585294,585358..585417,585478..585546, FT 585574..585627,585751..585819) FT /note="5 probable transmembrane helices predicted for FT CBO0495 by TMHMM2.0 at aa 7-29, 51-70, 91-113, 123-140 and FT 182-204" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 585241..585792 FT /note="Pfam match to entry PF02163 Peptidase_M50,Peptidase FT family M50, score 148.0, E-value 1.8e-41" FT /inference="protein motif:Pfam:PF02163" FT misc_feature 585268..585297 FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT repeat_region complement(586017..586152) FT /note="intergenic repeat 1" FT CDS complement(586326..586796) FT /transl_table=11 FT /locus_tag="CBO0496" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZ41" FT /protein_id="CAL82050.1" FT /translation="MDNYMKVKNSMLTFLLEQMGAKIHRITGIVCYVEFTIDSVKIKYM FT YHLDKKNKYFLERISPYNVTIGQFEKEEDVINTIKIDISKFENAKNSNKFNKFINTGKD FT FVDIVKSFENLYLHYNVSKYDLADIQQNIDSLKEKLEEVSTKADVVYDKTTK" FT CDS complement(586914..588203) FT /transl_table=11 FT /locus_tag="CBO0497" FT /product="arsenical pump membrane protein" FT /note="Similar to Staphylococcus aureus arsenical pump FT membrane protein ArsB SWALL:ARSB_STAAU (SWALL:P30329) (429 FT aa) fasta scores: E(): 8.8e-19, 23.55 38d in 433 aa, and to FT Bacillus anthracis arsenical pump family protein ba5143 FT SWALL:Q81K62 (EMBL:AE017039) (444 aa) fasta scores: E(): FT 2.4e-82, 52.9 38d in 431 aa" FT /db_xref="GOA:A5HZ42" FT /db_xref="InterPro:IPR000802" FT /db_xref="InterPro:IPR004680" FT /db_xref="UniProtKB/TrEMBL:A5HZ42" FT /protein_id="CAL82051.1" FT /translation="MIKIFNNFNMMLPAIIFIIVYALIISEKVNRVVASLGGAAIMLIL FT KLITQEKAFLKIDFNTIGLLVGMMIIVNITKRTGVFEYIAIKAAKFSKGNPIKILILFS FT VITAVLSGVLDNVTTVLLIVPVTLVITKTLEIDPIPFLMCEIFASNIGGTATLIGDPPN FT LMIGSAAGLSFLDFVKNLAPVIIIILTVTLLGIRQLYKNSMKTSEEDKKKIMALDESKA FT IRDMSLMKKCLTVLFLTLIGFLTHSYLGFESATIAIAGSAILLAISKVEPDEILQETEW FT GTIFFFIGLFIMTGVLEDVGIMEVLAQKTMSLTKGNLVMTGIFVLWISAIASAFIDNIP FT FVATMIPLIKAMGTMGGMDIVPLWWALSLGACLGGNGTMIGASANLVVIGIAEKSGYKI FT SFKDYFKLGFPVMLVSIIICTAYLLMFFLK" FT misc_feature complement(586920..588170) FT /note="Pfam match to entry PF02040 ArsB, Arsenical pump FT membrane protein, score -85.2, E-value 9.3e-08" FT /inference="protein motif:Pfam:PF02040" FT misc_feature complement(586923..588194) FT /note="Pfam match to entry PF00939 FT Na_sulph_symp,Sodium:sulfate symporter transmembrane FT region, score -204.6, E-value 3.7e-06" FT /inference="protein motif:Pfam:PF00939" FT misc_feature complement(order(586926..586994,587055..587123, FT 587166..587234,587295..587363,587406..587507, FT 587616..587684,587832..587900,587961..588029, FT 588057..588110,588129..588194)) FT /note="10 probable transmembrane helices predicted for FT CBO0497 by TMHMM2.0 at aa 4-25, 32-49, 59-81, FT 102-124,174-196, 233-266, 281-303, 324-346, 361-383 and FT 404-426" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(588107..588203) FT /locus_tag="CBO0497" FT /note="probabilty 0.742, with cleavage site probability FT 0.489 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT CDS complement(588303..589619) FT /transl_table=11 FT /locus_tag="CBO0498" FT /product="putative membrane protein" FT /note="Similar to Clostridium tetani conserved protein FT ctc00796 SWALL:Q897E4 (EMBL:AE015938) (324 aa) fasta FT scores: E(): 5.2e-28, 45.38 38d in 260 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ43" FT /protein_id="CAL82052.1" FT /translation="MSNFLEELKATKIISKNDIEKIKKFINIKYKNEDSKRKAYMVSST FT IHNIIESKIDFFPKSIHKDLKNAILKNTFLNNKDSIYLWDIFYSYIDYVDFKKENIKIL FT LNWININIKNKTDEESLVNYFYTNSLLKNHEKNGEIKTSSSSSSSSSSSSSSSSSSSSS FT SSSSSKDSSTKIADEQPYIKIKKVDSIYLQNAHTESNNNFINIKQNTANITNNKYNTKS FT ITKKFNIDFLYKNNIFKLYNNSITFALTILFISSISIYLFNMDTSIKTNSKNIIVYENK FT NVKTKKNNILDKNKHLPQYVKYKTLNNEKLKKYLYTKNSLLADEPYFSSIISSAEEFDI FT NPLILFAITGQEQGFVPKSNKSAKKIGNNPFNVFHSWEEYNSDIKDSSRIAGRTVFNLL FT KTMPKGQDPFKWVNNTYAEDINWWKGVKSLFNELEKAVK" FT misc_feature complement(588834..588902) FT /note="1 probable transmembrane helix predicted for CBO0498 FT by TMHMM2.0 at aa 240-262" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 589115..589192 FT /rpt_unit_seq="(tagaac)13" FT CDS 589895..590548 FT /transl_table=11 FT /locus_tag="CBO0499" FT /product="tRNA guanine-N(7)-)-methyltransferase" FT /EC_number="2.1.1.33" FT /note="Similar to Clostridium tetani tRNA FT guanine-n(7)-)-methyltransferase ctc00794 SWALL:TRMB_CLOTE FT (SWALL:Q897E6) (211 aa) fasta scores: E(): 1.2e-56, 69.9 id FT in 216 aa" FT /db_xref="GOA:A5HZ44" FT /db_xref="InterPro:IPR003358" FT /db_xref="UniProtKB/Swiss-Prot:A5HZ44" FT /protein_id="CAL82053.1" FT /translation="MRLRKKWWARPEIEASDKFAEEPKELRGKWNKEFNNNNDIHLELG FT CGRGGFISQLVEKNKDINYVGIDLKDEVIVYAIRKVKEKEEEVKREFKNIKFVTMNIMG FT IAEVFDKNEISKIYINFCNPWPKERHNKRRLTHTKLLTEYKKFLKPNTEIWFKTDDKEL FT FEDSQEYFKESGFNIEYITYDLHNSDFKENIKTEYETKFETMGMKIMFLKARLL" FT misc_feature 589952..590545 FT /note="Pfam match to entry PF02390 Methyltransf_4,Putative FT methyltransferase, score 135.4, E-value 1.1e-37" FT /inference="protein motif:Pfam:PF02390" FT CDS 590761..591024 FT /transl_table=11 FT /locus_tag="CBO0500" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein Cpe1164 cSWALL:Q8XL78 (EMBL:AP003189) (72 aa) fasta FT scores: E(): 0.006, 34.32 38d in 67 aa, and to Clostridium FT acetobutylicum uncharacterized protein,homolog of ywsa FT b.subtilis cac2598 SWALL:Q97FX7 (EMBL:AE007757) (76 aa) FT fasta scores: E(): 0.2, 28.98 38d in 69 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ45" FT /protein_id="CAL82054.1" FT /translation="MIGGNNNFGKDIVALVKDGKGAVTGYKLNNGELLTKEQAIERAAE FT GEINNVVIGTAQNGEQYLHGIPEKTGGIDLQTLPTVKQNSFE" FT CDS complement(591119..591613) FT /transl_table=11 FT /gene="tpx" FT /locus_tag="CBO0501" FT /product="thiol peroxidase" FT /EC_number="1.11.1.-" FT /db_xref="GOA:A5HZ46" FT /db_xref="InterPro:IPR000866" FT /db_xref="InterPro:IPR002065" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR018219" FT /db_xref="UniProtKB/TrEMBL:A5HZ46" FT /protein_id="CAL82055.1" FT /translation="MEIKFMGNPMTLEGNELKVGDMAPDFTAIDNNMKPVSLKDTKGVR FT ILSVVPSLDTEVCDLETRTFNSKAAEIPNVTIYTISMDLPFAQARWCGAHGVDKVITLS FT DFKDRLVGKNYGTYIKELGLLTRAVFVIDSNNKITFVEYVPEVTNQPNFDKVLEAAKAA FT K" FT misc_feature complement(591140..591559) FT /note="Pfam match to entry PF00578 AhpC-TSA, AhpC/TSA FT family, score 81.7, E-value 1.6e-21" FT /inference="protein motif:Pfam:PF00578" FT misc_feature complement(591338..591373) FT /note="PS01265 Tpx family signature." FT /inference="protein motif:ProSite:PS01265" FT CDS 591984..592727 FT /transl_table=11 FT /locus_tag="CBO0502" FT /product="3-oxoacyl-[acyl-carrier protein] reductase" FT /EC_number="1.1.1.100" FT /db_xref="GOA:A5HZ47" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020904" FT /db_xref="UniProtKB/TrEMBL:A5HZ47" FT /protein_id="CAL82056.1" FT /translation="MVNLIGKVAIVTGGSRGIGRSIALELTKAGANVIINYNKNKEDAL FT ETLSLIKDLGGYGYVCKADVSDYGSSKKLIEFAINKFGKIDILVNNAGIAKIGLFIDMD FT ENDWDNIINTNLKGVFNCSHNVIKYMLDKGEGTIINVSSMWGNIGASCEVIYSASKGGI FT NAFTKALAKELGPNNIRVNAVAPGVINTDMNSSLCEEDMDNLKNEIPLMRLGEGEEVGR FT VVAFLSSKDSSYINGQIITIDGAMC" FT misc_feature 591996..592721 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 301.8, E-value 8.5e-88" FT /inference="protein motif:Pfam:PF00106" FT misc_feature 592410..592496 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT /inference="protein motif:ProSite:PS00061" FT CDS 592790..593743 FT /transl_table=11 FT /locus_tag="CBO0503" FT /product="two-component response regulator" FT /db_xref="GOA:A5HZ48" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:A5HZ48" FT /protein_id="CAL82057.1" FT /translation="MQNIIILDDMSYMRYRVKDLLEEKDIKVYETSTSFEFFNKLYEKK FT DNIDLIILELGLTREDGFEVVEKIREKNVDIPIVILTKVNTRDAFAKVIREGISDYILK FT PFDNKVLLDRIVKTIKESKASKEEVSIGKKSKVQKIYISEDNENIDKDKEEFAKGKEIA FT DFNGIEEELPEEFKIYFVDELNKAKTDNTKVSSVVFTLIKNTDEEEKIDVKESYITLTE FT VFYKGIKDIFKAPNFITKHGLLTFVALLPNCDEEKVEDMKNRIQEKYKMLSLIYPQLSQ FT YHVGYGNVTYPLDGDTVEALIDKLMDKMRENIKLKE" FT misc_feature 592793..593158 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 73.3, E-value 5.2e-19" FT /inference="protein motif:Pfam:PF00072" FT CDS complement(593867..596023) FT /transl_table=11 FT /locus_tag="CBO0504" FT /product="putative peptidoglycan hydrolase" FT /db_xref="GOA:A5HZ49" FT /db_xref="InterPro:IPR000064" FT /db_xref="InterPro:IPR003646" FT /db_xref="InterPro:IPR007921" FT /db_xref="InterPro:IPR013247" FT /db_xref="UniProtKB/TrEMBL:A5HZ49" FT /protein_id="CAL82058.1" FT /translation="MNKSRKAFATCAVSATLLGQNFLFSQNVLAVSDSMYPNVNSNAYN FT SNNIFTQCGFKGQCTWFTYGRVLEKLNMKLPSQFYGNAIDWWYSNIKSNTFSYGSEPQA FT NSIVVWSGGSKGYGHVGFVEKVVGDTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLF FT LKGYIYLNGSSNSSNSNNDYTIIKTSKVSCSSLNVRSNPSLSSAVIGGVSKNQTLSVIS FT ESNGWSKIKYGSGVGYVSSKYLYDENNTINSGNGGSSSNESVQPGFVKLSNSSSVLNVR FT SSANLSSNIIGSLKHGSSVSILGKTGSWYKIKYGSKTAYVSSSYISSSNDSNSSSNTSS FT NTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSWYKVKYGSKIG FT YVSSQFITTSNSSNNSGSSVTDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKV FT EILSSSGEWYKINFKNTTGYVYSKYIKDTTQKVVAFNQIATQDKKYGVKENNVTVDNKS FT AEVVKSNTENEKKLVAIKSEKEQEREKSSEPVQTKVTEETQRKEAEESQRKAAEEAQRK FT EAEEAQRKEAEAEASESQQKEQSNVSEKAPATHGDVISYARQYLGTPYVYGGTSPSGFD FT CSGFVQYVYKNAAGISLPRTTYDQIGVGSRVSQDQLQPGDLVFPDTGHVGIYIGGGQMI FT HASKPGDVVKISSVWAFYAGVRIK" FT misc_feature complement(593873..594163) FT /note="Pfam match to entry PF00877 NLPC_P60, NlpC/P60 FT family, score 159.3, E-value 7e-45" FT /inference="protein motif:Pfam:PF00877" FT misc_feature complement(595517..595906) FT /note="Pfam match to entry PF05257 CHAP, CHAP domain,score FT 52.9, E-value 7.4e-13" FT /inference="protein motif:Pfam:PF05257" FT sig_peptide complement(595930..596023) FT /locus_tag="CBO0504" FT /note="probabilty 1.000, with cleavage site probability FT 0.893 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS 596331..597275 FT /transl_table=11 FT /locus_tag="CBO0505" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZ50" FT /db_xref="InterPro:IPR022742" FT /db_xref="UniProtKB/TrEMBL:A5HZ50" FT /protein_id="CAL82059.1" FT /translation="MKSSYFSFKGREDTKINVYKWEPDKEQDIKAIIQISHGMAETANR FT YEELASYLSEAGYIVYANDHRGHGKSALSLDQLGYLGEEDGFMSMVEDVHTLNTIIKEE FT NKGLPVFLLGHSMGSFISQRYIQLYGQELNGVILVGTNGNQGPLINMGILVAKLEMKFK FT GRRHKSNLLNNLSFGGYNKKFEPNRTEFDWLTRDEKEVDKYIKNEYCGAIFPTSFYHDF FT LKGLKSIWKEENKNKIPINLPIFIIAGDKDPVGNFGKGILNLYNFYKSIGVVDVNYKLY FT KEGRHEILNEINKREVFQDVLNWIDSKYNKTIK" FT misc_feature 596658..596687 FT /note="PS00120 Lipases, serine active site." FT /inference="protein motif:ProSite:PS00120" FT CDS 597538..598785 FT /transl_table=11 FT /locus_tag="CBO0506" FT /product="putative two-component response regulator" FT /db_xref="GOA:A5HZ51" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR008207" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR013656" FT /db_xref="UniProtKB/TrEMBL:A5HZ51" FT /protein_id="CAL82060.1" FT /translation="MVKYGDINALNLFVGELNNVSIFILDKDFHYIKLNNSHKKFMEKL FT LGIHVEVGMNILEIIEEYCPLNISDNLILRIKEKMKSALKGNKIITNEEVLIDGSKVEF FT YEIEIIPLKDEDNNILGVGACCLNITENVNIMIEVLKTKLDLTYKKHLKNSELLNGENS FT KEKIFKILIAEDNNVNQIVMSKLIELKGWVAKTVSNGKESIIALEKDNYDLIFMDISMP FT IMNGLDAASIIKKNPKWSKIPIVALTAYDSLEQKKKFKSLGMDDYLSKPIDSNKLQYII FT DKHLNNNIQIKNNKVKVNNKEIYSSFERLEKNLDGNKELVIELAHKIIKLFSKEQMNEI FT MRLSRDGDIENLRNLIHKLKGASSNFDLYKVRKLLNEIKERAIVGDIEHIYKLVEKITI FT NMNKLEKDLIDYSKNK" FT misc_feature 598039..598404 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 110.9, E-value 2.5e-30" FT /inference="protein motif:Pfam:PF00072" FT CDS 599082..599666 FT /transl_table=11 FT /locus_tag="CBO0507" FT /product="putative metal dependent phosphohydrolase" FT /db_xref="GOA:A5HZ52" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR006675" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5HZ52" FT /protein_id="CAL82061.1" FT /translation="MYKLSSLSTNTLKISKDEKLDLEIFLHSKRVAIYVKKIAELMKLS FT SKQSNDLVLLALNHDIGKARIPSNILNKKDKLSHSEFEIVKRHTQFGADILMEYGYCLE FT ICNVVKFHHENFDGSGYYGLKEKSIPMAARILRIADVYEALTTDRCYRRAYTREAALEI FT MVKEENLYDPEILELFIKKIYINSFNLQLCI" FT misc_feature 599151..599516 FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 87.3, E-value 3.3e-23" FT /inference="protein motif:Pfam:PF01966" FT CDS 599702..601726 FT /transl_table=11 FT /locus_tag="CBO0508" FT /product="methyl-accepting chemotaxis protein" FT /db_xref="GOA:A5HZ53" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR004089" FT /db_xref="UniProtKB/TrEMBL:A5HZ53" FT /protein_id="CAL82062.1" FT /translation="MKFKNTKDKNFISVKSVINIQILGLIILICGILGIVSYKSASKAL FT TKNIKMELENKAKNGSTILGNRMNEVKERLQIIANWPEIKSMDLKNQKYQLEDEAKSWG FT FKDFKIVNLQGNQYTMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKVVVP FT IKSNDEKVVGALIGSLDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRG FT NDLKNYSNDPKFVELLNFQKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEK FT NYLFKDIYTLRIVILISTILFIILGIIISNIISKNIKDPLVKMKEHAEQLEKCNLTYKN FT SINRKDEFGETARALNEASNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITA FT FTEEISANMEESSAGIEEMASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDAC FT SSMSEVEKIYENSKEKLEKAIREAQVVENISEMAESILGIAEKTNLLALNAAIEAARAG FT EQGRGFAVVAEEVRKLAEQSSNAVENIQVNVKTVLKAVSELSSSSEFVLELIEENVLKD FT YKKLIDVSVQYKNDGNIVKELIENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGE FT IAEKISNVNQQNESILQENEKNLEISQQLVNTMNEFQSI" FT sig_peptide 599702..599831 FT /locus_tag="CBO0508" FT /note="probabilty 0.994, with cleavage site probability FT 0.503 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(599759..599827,600572..600640) FT /note="2 probable transmembrane helices predicted for FT CBO0508 by TMHMM2.0 at aa 20-42 and 291-313" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 600584..600793 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 43.3, E-value 5.6e-10" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 600854..601723 FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 59.9, E-value 5.6e-15" FT /inference="protein motif:Pfam:PF00015" FT CDS 601931..602725 FT /transl_table=11 FT /locus_tag="CBO0509" FT /product="putative two-component response regulator" FT /db_xref="GOA:A5HZ54" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR018745" FT /db_xref="UniProtKB/TrEMBL:A5HZ54" FT /protein_id="CAL82063.1" FT /translation="MDAIERVMNNVKILYVEDEAITQIIVKKILKKISGKLYIAENGQE FT GFELFKVYRPDIVITDLRMPIMNGIDMIKKIRDYDQECGIIINTEVDDIEYIIKSVDIG FT IDKYLVKPIEKEEIIEAIKNVLKKVIKRKNDKGSLCELVNFSKEHKLKITEEIKTKISF FT LVKKYTRKGPKDVQVFWGGSTIEINTYDILTPMEKAVIKNNNNVALIEYYREVFYEQVS FT QEFNNLISEVIGFTVEISQININVIENMERIIMKLNLNNMFK" FT misc_feature 601961..602320 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 90.8, E-value 3e-24" FT /inference="protein motif:Pfam:PF00072" FT misc_binding 602931..603157 FT /gene="serS" FT /locus_tag="CBO0510" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 603207..604484 FT /transl_table=11 FT /gene="serS" FT /locus_tag="CBO0510" FT /product="seryl-tRNA synthetase" FT /EC_number="6.1.1.11" FT /db_xref="GOA:A5HZ55" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002317" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR010978" FT /db_xref="InterPro:IPR015866" FT /db_xref="UniProtKB/TrEMBL:A5HZ55" FT /protein_id="CAL82064.1" FT /translation="MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRDIKP FT EADNLRAKRNKISKQIGGLMAQEKKGEAEELKKQVTAASDHLAELEKGESELEEKIKKI FT MITIPNIIDPSVPIGKDDSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVA FT GNGFYYLMGDIARLHSAVISYARDFMINRGFTYCIPPFMIRSEVVTGVMSFAEMDAMMY FT KIEGEDLYLIGTSEHSMIGKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRI FT HQFEKQEMIVVCKPEDSVMWYDKLWQNTVDFFRSLDIPVRTLECCSGDLADLKVKSVDV FT EAWSPRQKKYFEVGSCSNLGDAQARRLKIRVAGENGKYFAHTLNNTVVAPPRMLIAFLE FT NNLNEDGSVNIPVPLQPYMGGMTVIK" FT misc_feature 603207..603356 FT /note="Pfam match to entry PF02403 Seryl_tRNA_N,Seryl-tRNA FT synthetase N-terminal domain, score 52.2,E-value 1.2e-12" FT /inference="protein motif:Pfam:PF02403" FT misc_feature 603702..604166 FT /note="Pfam match to entry PF00587 tRNA-synt_2b, tRNA FT synthetase class II core domain (G, H, P, S and T), score FT 119.1, E-value 8.8e-33" FT /inference="protein motif:Pfam:PF00587" FT misc_feature 603996..604070 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT /inference="protein motif:ProSite:PS00179" FT repeat_region 604611..604642 FT /rpt_family="CB.310" FT /rpt_type=DIRECT FT /rpt_unit_seq="tcaattcgctaagagattctaatttgtttttt" FT /inference="ab initio prediction:REPuter" FT repeat_region 604757..604786 FT /rpt_family="CB.19" FT /rpt_type=DIRECT FT /rpt_unit_seq="ccacatatccctctttttaataggctgaag" FT /inference="ab initio prediction:REPuter" FT repeat_region 604783..604812 FT /rpt_family="CB.59" FT /rpt_type=DIRECT FT /rpt_unit_seq="gaagctagcataactctttaaagataattt" FT /inference="ab initio prediction:REPuter" FT CDS 605062..607416 FT /transl_table=11 FT /locus_tag="CBO0511" FT /product="putative ATP-dependent helicase" FT /db_xref="GOA:A5HZ56" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR006555" FT /db_xref="InterPro:IPR010614" FT /db_xref="InterPro:IPR014013" FT /db_xref="UniProtKB/TrEMBL:A5HZ56" FT /protein_id="CAL82065.1" FT /translation="MECKDEVNISVRNLVEFILRNGDIDIGYLGGSRAQEGIKAHKKLQ FT KIRMESATPLLMIEYEKEVLLKYAIEYKDFLFKVEGRADGIIIENDSITIEEIKTTTKN FT LDEIKDNLLHWAQAKCYAFIYSKEKNLEKINVKLTYYNIKNENIKSIDKTFKIQELEEF FT FYDIIHKYYVWIEFNYKFKQERNRDIKLLKFPFKEYREGQRKLAVSVYKTISENKNIFI FT EAPTGIGKTISTIFPSVKAIGEGKIDKIFYLTAKNTTRDFVLSNFKNMINRGMAFKVIT FT LISKEKICLKEEFKCSSEKCEFAKGHFDRINEAILDILNNENIIDETVIKKYALKHKVC FT PFEFSLDISLWCDGIICDYNYVFDPRVYLRRFFSDGKDDFVLLIDEAHNLLDRSREMFS FT SSISKNNVLSLRKSIKDKSKALYRILGKINKELLDIKKIYEVDNYYMEKEKPEKLQILL FT NNFTSEIEVLMMKGNLQIDDELLNFYFEALYFLKICELYGDNYITYGEEYNSDFTIKLF FT AIDTSGLLNEILKKSKANVFFSGTFSPIKYFREVLGGDDEDYVLKLNSPFPIENHRILI FT GYNVSTKYKNRCKSYENICDYINMACKIKKGNYMVFFPSYKYMKEVFLLYKEKYSEENV FT IVQNSSMSDEEREEFIDKFEKEKENVIGFCVLGGIFSEGIDLTGDKIIGAIIIGVGLPQ FT ICVERNLIKNYYDDKKQSGFQYSYIYPGMTKVMQAAGRVIRTELDKGIILLIDERFNSY FT SYKELFPKHWYPNINVKNEKELEGALKEFWN" FT misc_feature 605731..605754 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region complement(607581..607619) FT CDS complement(607707..607898) FT /transl_table=11 FT /locus_tag="CBO0512" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZ57" FT /protein_id="CAL82066.1" FT /translation="MDLTTKDIIKKKILDAQENVRDYQMYSHKIDDKVVADLFGEFAEN FT EAMQAKKLRNVLDKYDSY" FT CDS complement(608228..608848) FT /transl_table=11 FT /locus_tag="CBO0513" FT /product="GntR-family transcriptional regulator" FT /db_xref="GOA:A5HZ58" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZ58" FT /protein_id="CAL82067.1" FT /translation="MKNSTGPLYKNIALDIANRIVRGKLKSDEKISGRSTLASMYNVSP FT ETIRRAVALLEDMSVVKSTKGSGIEILSISAAEKFIERNKSNVYLATVKENIEDILLRK FT KRLDEELQENFNKILDLMDRFENISPFTLIEVAVEENCKFIGKKVNEVKFWQQTGTTMV FT AYRRGKEIIISPGPNYIFTEGDIIVVIGTHNVYKKVYNFLYEK" FT misc_feature complement(608231..608491) FT /note="Pfam match to entry PF02080 TrkA-C, TrkA-C FT domain,score 51.0, E-value 2.7e-12" FT /inference="protein motif:Pfam:PF02080" FT misc_feature complement(608636..608827) FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 34.3, E-value FT 3e-07" FT /inference="protein motif:Pfam:PF00392" FT misc_feature complement(608690..608755) FT /note="Predicted helix-turn-helix motif with score FT 1583.000, SD 4.58 at aa 90-111, sequence FT SGRSTLASMYNVSPETIRRAVA" FT CDS 609103..610056 FT /transl_table=11 FT /gene="ceo" FT /locus_tag="CBO0515" FT /product="N(5)-(carboxyethyl)ornithine synthase" FT /EC_number="1.5.1.24" FT /db_xref="GOA:A5HZ59" FT /db_xref="InterPro:IPR007698" FT /db_xref="InterPro:IPR007886" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:A5HZ59" FT /protein_id="CAL82068.1" FT /translation="MKLGFLIPNHPNEKRVALLPEHVKGFNNELVIETGFGETLGISDA FT EYVKVGCTIASREEIFKTCEGIFSLKVLKPQDYKHIREGQIIVGWTHPEGSGKIFMEEQ FT GIPKNLIIVDLDNIHPSIYYKDYVIPMEWIPSNFVRKNSYIAGYASTMHAVMNYGSIPT FT SETKVAILGSGNVSQGAFSAISKFNPDIRMFYRKTMNQLKDELEEFDIIINGIEMDNPN FT KHILTLEDQMRLKKNCLIIDAAANLGKAIEGARHTTASDPIYNKDGKYYYAVNNSPSIF FT YRQSSKAISEAFSKHVYSKELEFYLDVIAEVEEMIV" FT misc_feature 609127..609507 FT /note="Pfam match to entry PF05222 AlaDh_PNT_N, Alanine FT dehydrogenase/PNT, N-terminal domain, score 65.2, E-value FT 1.4e-16" FT /inference="protein motif:Pfam:PF05222" FT misc_feature 609559..610029 FT /note="Pfam match to entry PF01262 AlaDh_PNT_C, Alanine FT dehydrogenase/PNT, C-terminal domain, score 32.5, E-value FT 3.6e-10" FT /inference="protein motif:Pfam:PF01262" FT CDS complement(610260..612266) FT /transl_table=11 FT /gene="fbp" FT /locus_tag="CBO0516" FT /product="fructose-1,6-bisphosphatase" FT /EC_number="3.1.3.11" FT /db_xref="GOA:A5HZ60" FT /db_xref="InterPro:IPR009164" FT /db_xref="UniProtKB/Swiss-Prot:A5HZ60" FT /protein_id="CAL82069.1" FT /translation="MTLYDENNLHIIKDNLRYLKLLSKQYPSISSASSEIINLQAILNL FT PKGTEHFISDVHGEYESFTHMLKNASGVIKRKIDDVFGTSLRECDKKNLATLIYYPEQK FT LDLIKKSEKNLEDWYKITLYRLIRLCQIVSSKYTRSKVRKSLPSDFAYIIEELLNEQGD FT RVDKQEYYNSIIETIIDIDRASEFIIAISNVIQRLVVDKLHIIGDIYDRGPGAEIIIEA FT LSKHHSIDIQWGNHDIVWMGAAAGCEACIANVIRISLRYANLSTLEDGYGINLLPLATF FT AMDFYKEDNCENFKPRTIDKNLNETDIKLLSKMHKAISIIQFKLEGKIIKRRPEFKMGE FT RLLLDKINIKEGTLNLNEKIYKLIDTNFPTLDKENPYELNERERDLVEKLTNSFINSEK FT LQRHIKFLYSNGNLYLKYNSNLLYHGCIPLNEDGSLKEVTLCKETLKGKSLLDKLDRLA FT REAYFFKKDPESKLYGMDMMWYLWCGSNSPLFGKKKMTTFERYFLDDKNTHKEQKNPYY FT KYRNDEKMCTMIFEEFELDADNSHIINGHIPVKTKEGENPIKANGKLLVIDGGFCKAYQ FT PQTGIAGYTLIYNSYGLLLTSHEPFSSIHKAIVEGNDILSSTTILEHVSSRKRVLDTDS FT GEEIKKQIHDLEMLLVAYRKGLIKEENEANIRF" FT CDS 612550..612912 FT /transl_table=11 FT /locus_tag="CBO0517" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZ61" FT /protein_id="CAL82070.1" FT /translation="MNRLSNFIRSTGNLLGNSIEDICENTGEVLYKNFKKNNHNSMAKG FT AKGSGKLLGKVGSLTTKSIFNIAGITLEGGVKFSKFTGKVIKQKAVKREVRIYGESKEF FT YKGKFVDADYKVINKK" FT CDS 613087..613500 FT /transl_table=11 FT /locus_tag="CBO0518" FT /product="putative oxygen binding protein" FT /db_xref="GOA:A5HZ62" FT /db_xref="InterPro:IPR012312" FT /db_xref="InterPro:IPR012827" FT /db_xref="InterPro:IPR016131" FT /db_xref="UniProtKB/TrEMBL:A5HZ62" FT /protein_id="CAL82071.1" FT /translation="MFEWKKCYSCNISKIDNQHKRLFELADEIYTIVSVNDGYDHFDEI FT MEAIKALKEYTVYHFSYEEEVMRKYEYSDLDNHKVEHDAFVNKIKSINEEEIDEKQKNF FT LMDLLEFIVNWIENHILKSDLKYKEYLNGLGVY" FT misc_feature 613090..613476 FT /note="Pfam match to entry PF01814 Hemerythrin,Hemerythrin, FT score 85.4, E-value 1.2e-22" FT /inference="protein motif:Pfam:PF01814" FT CDS complement(613714..614409) FT /transl_table=11 FT /locus_tag="CBO0519" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZ63" FT /protein_id="CAL82072.1" FT /translation="MDKYKKIILKDAIKNIKSAKESLSYTKDIKKDNLEGSIINFRNGK FT DFNTILDIETNLGKIKFPGWITLKESKNLDPSYSEHSIAIWIKEKNFLDNYRYIVFDNP FT ICSFSLTYFSFFPVKITALDSKENVLKVIEGKKNWCDEKGYSNISELNIDVENNIIKYI FT KVESFAEYIGIGSLKTYKKIHTDIPNKNNNYKAHNDFDTFFIALCIYLLFFHRENNNHY FT YKKNKYRKK" FT CDS 615148..615570 FT /transl_table=11 FT /locus_tag="CBO0520" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZ64" FT /protein_id="CAL82073.1" FT /translation="MNIFYLLPISISYFEINDIEEQQLKEEYKKFISSIERMNYTDLKE FT EDFVAKIILDLFSIGFKADKEISVFLKYKDYILEKEKMDPYDPLKKTCIDTGNEKLNLI FT LELVSLNPYKIKISGDLYQKCDKKWKVKKFNQIIVL" FT repeat_region 615661..615741 FT /note="intergenic repeat 1" FT CDS complement(615846..616496) FT /transl_table=11 FT /locus_tag="CBO0521" FT /product="superoxide dismutase [fe]" FT /EC_number="1.15.1.1" FT /db_xref="GOA:A5HZ65" FT /db_xref="InterPro:IPR001189" FT /db_xref="InterPro:IPR019831" FT /db_xref="InterPro:IPR019832" FT /db_xref="UniProtKB/TrEMBL:A5HZ65" FT /protein_id="CAL82074.1" FT /translation="MIVAKKYPFDNVKGISLKQLTEHYKLYDGYVNMINKIWSIPNNSK FT DFKDSNATFSKLRCIKLGESYALDGVKLHELYFQNMTSGHIPINGPILDKILEDFNSVE FT NFTELFKETGKSMRGWVVLGIDPLDKKLHIFGSDSHDNGAIWLAYPLLVMDVYEHAYFM FT DFGTDKGKYMDAFLQNVNWNLINNRLGMYYTLINALKHNILLNNKMKHRNMFY" FT misc_feature complement(615930..616247) FT /note="Pfam match to entry PF02777 sodfe_C, Iron/manganese FT superoxide dismutases, C-terminal domain, score FT 55.5,E-value 1.2e-13" FT /inference="protein motif:Pfam:PF02777" FT CDS 616689..617528 FT /transl_table=11 FT /locus_tag="CBO0522" FT /product="putative metallo-beta-lactamase family protein" FT /db_xref="GOA:A5HZ66" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:A5HZ66" FT /protein_id="CAL82075.1" FT /translation="MSIKITTLIEDSKNEESELIEEHGLSMFINTPRCNIIFDTGASGN FT FIKNADKLNIDLHETNYMILSHAHYDHCGGVRSFIENIKCYPELYVSKNFFENSNKFKI FT GKDRENKYLGIDFDEKYLIDNGIPINYVEEDILEIEPNIFIATNFKEDNSFEEFTSNMV FT IKKGEGYILDNFKEEVALAIDTYKGLVVLVGCSHVGIANILNNISKRLNKRIYAVLGGT FT HLIKCDENRINKTIEVFNELDINIIGVSHCTGEFATMKLEELKDRFFLNNTGNILEI" FT misc_feature 616755..617357 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 28.3, FT E-value 1.8e-05" FT /inference="protein motif:Pfam:PF00753" FT misc_feature 616794..616829 FT /note="PS00141 Eukaryotic and viral aspartyl proteases FT active site." FT /inference="protein motif:ProSite:PS00141" FT CDS complement(617626..617925) FT /transl_table=11 FT /locus_tag="CBO0523" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:A5HZ67" FT /protein_id="CAL82076.1" FT /translation="MPFTSNNSWKISGVLLFILILFLANFLIFSVLPVVIVAGLVLFGV FT YKLVNYIKSWKINKKGFNNRKNKEKNFEKFDNLGPNDIPDISEENIIDVDYKEV" FT misc_feature complement(617788..617883) FT /note="1 probable transmembrane helix predicted for CBO0523 FT by TMHMM2.0 at aa 15-46" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(617811..617925) FT /locus_tag="CBO0523" FT /note="probabilty 0.944, with cleavage site probability FT 0.766 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT CDS complement(618073..619926) FT /transl_table=11 FT /locus_tag="CBO0524" FT /product="putative membrane protein" FT /db_xref="GOA:A5HZ68" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR003855" FT /db_xref="UniProtKB/TrEMBL:A5HZ68" FT /protein_id="CAL82077.1" FT /translation="MIKKFLDILIGQPLPNEKSSHERYNVPFGLAIMASDAVSSVSYAA FT EEILGVLIAVIGLASYKWLGWVSLMIIILLLILTVSYIQIIHAYPHGGGAYVVAKENIN FT LKSGLIAASALLVDYILTVAVSSSAGVAAIISAFPSLGSHKILLAVSIIIILTILNLRG FT VSESAKIFSLPAYLFILSMIFMIIYGLIKYSMYGAPEPMVHSQIKATGELSVFLILKAF FT SSGCSALTGLEAVSNSVPNFKEPSQKNAKTVMILLSCLILFIFGGTSILARFYRTIPVG FT YPTVIAQLAYGIFGQSFMFYVIQFTTAMILIMACNTAFTGFPMLMYTVGKDGFVPRQFT FT VRGKRLGFSNGIVALSFVACLLVITFNAETHSLLPLYAVGVFLSFTLAQAGMVKHWSKN FT KEKGWRSRSIINAFGAFLAAATTLIIAYEKFLHGAWMVIIVIPILVASMLSIKKHYNSV FT AIQLRVETADLKDYNLNKPFTQIIVVPIASLNKAALATLQYARSLSSYVIALNVSTDNK FT EIDKLKNRWAKLDTDILLVSKYSTYRTVVTPLLGYINQIANATSETEKITVMIPQFITH FT EGLGEVLHNHTGFIIRESLLRNKNIIVSTYPYHLGDTDVEI" FT misc_feature complement(order(618574..618633,618646..618705, FT 618742..618810,618823..618891,618940..619008, FT 619018..619086,619105..619173,619231..619290, FT 619351..619419,619432..619491,619504..619572, FT 619669..619737,619750..619818)) FT /note="13 probable transmembrane helices predicted for FT CBO0524 by TMHMM2.0 at aa 37-59, 64-86, 119-141, FT 146-165,170-192, 213-232, 252-274, 281-303, 307-329, FT 346-368,373-395, 408-427 and 432-451" FT /inference="protein motif:TMHMM:2.0" FT CDS 620165..620320 FT /transl_table=11 FT /locus_tag="CBO0525" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZ69" FT /protein_id="CAL82078.1" FT /translation="MECNKYFIGVVLLVIGLALKLCLLGHKDNSLEYKTLEKIGCNIRK FT LRLKNL" FT misc_feature 620183..620242 FT /note="1 probable transmembrane helix predicted for CBO0525 FT by TMHMM2.0 at aa 7-26" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 620325..620358 FT repeat_region 620413..620457 FT repeat_region 620484..620518 FT repeat_region 620561..620592 FT repeat_region complement(620805..621116) FT CDS complement(621121..621585) FT /transl_table=11 FT /locus_tag="CBO0526" FT /product="AsnC-family transcriptional regulator" FT /db_xref="GOA:A5HZ70" FT /db_xref="InterPro:IPR000485" FT /db_xref="InterPro:IPR011008" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR019887" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:A5HZ70" FT /protein_id="CAL82079.1" FT /translation="MDLNIDGLDELDLQILEILIKDSRTPFLEIARKCHVSGGTIHVRM FT KKMHDIGIIKGTKLIIDNSKLGYDVCCFIGIYLDKASYFNSVLKELNEIKEITELHYTT FT GQYSIFVKVICKSITHLQDLLMNKIQRVEGIQRTDTFISLSQLIDRNINI" FT misc_feature complement(621187..621492) FT /note="Pfam match to entry PF01037 ASNC_trans_reg, AsnC FT family, score 92.9, E-value 6.9e-25" FT /inference="protein motif:Pfam:PF01037" FT misc_feature complement(621448..621513) FT /note="Predicted helix-turn-helix motif with score FT 1238.000, SD 3.40 at aa 25-46, sequence FT TPFLEIARKCHVSGGTIHVRMK" FT CDS 622110..622484 FT /transl_table=11 FT /locus_tag="CBO0527" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZ71" FT /protein_id="CAL82080.1" FT /translation="MPVWLKFALQILFFSIIVIIGYTALKVYVLDKININKWVVFALSI FT FILIFPALIKLNINGTIWQYVQSAIVIILTLWFLDLMGIGAGSRPKKKKNDIVIRPKAK FT PNRAKNFKKENNKKENNKKK" FT misc_feature order(622128..622196,622221..622289,622302..622370) FT /note="3 probable transmembrane helices predicted for FT CBO0527 by TMHMM2.0 at aa 7-29, 38-60 and 65-87" FT /inference="protein motif:TMHMM:2.0" FT CDS 623108..624481 FT /transl_table=11 FT /locus_tag="CBO0528" FT /product="probable amino acid permease" FT /note="This CDS is also similar to CBO0529, 62.162 identity FT (62.30238ngapped) in 444 aa overlap." FT /db_xref="GOA:A5HZ72" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:A5HZ72" FT /protein_id="CAL82081.1" FT /translation="MENEGHSHKKIGLFGATCVVAGNMIGSGVFMLPASLAAVSSPGTT FT LIAWLVTGIGAIFMALSCARLGSRIPKTGGPYEFGKLAFGDFIGFLNAWLYWSATWISN FT AAIIIAIGSYASYLIPALNNGFNALLFNSAILWIFTFLNIKGAKEAASFETVITVFKFL FT VFIFFIIFAAIHFNVANITPIMPKEKGMNTLPLAAATTLWAFTGFESSTVGAGTIKDPE FT KNISRSTILGLVITILFYVAISFFAMGAIPKDVLANSPSPMTDILAQFFGSGVVKVFNL FT AIVITILGTIAGWIMIAGQMSYAVAKDGLFPAVFAKLHHKYKTPYKGLIINAILTNILL FT ILNSSKGMVSAYNFMILLATLSYLPVYATTSASDIVLLFKCRGQLTVSKFIKIAIIPLI FT GFTYACWAIYGSGAETVLYGFMLMLAGVPFYIYMKLKNKKDISKATIDIDNIVECFNE" FT sig_peptide 623108..623216 FT /locus_tag="CBO0528" FT /note="probabilty 0.954, with cleavage site probability FT 0.369 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(623144..623212,623240..623308,623369..623437, FT 623480..623539,623576..623644,623687..623755, FT 623792..623860,623903..623998,624089..624142, FT 624170..624238,624275..624343,624353..624406) FT /note="12 probable transmembrane helices predicted for FT CBO0528 by TMHMM2.0 at aa 13-35, 45-67, 88-110, FT 125-144,157-179, 194-216, 229-251, 266-297, 328-345, FT 355-377,390-412 and 416-433" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 623150..624433 FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 60.8, E-value 3.2e-15" FT /inference="protein motif:Pfam:PF00324" FT CDS 624919..626268 FT /transl_table=11 FT /locus_tag="CBO0529" FT /product="probable amino acid permease" FT /note="This CDS is also similar to CBO0528, 62.162 identity FT (62.30238ngapped) in 444 aa overlap." FT /db_xref="GOA:A5HZ73" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:A5HZ73" FT /protein_id="CAL82082.1" FT /translation="MEENNKLKKEIGLFTATFIVAGNIIGSGIFMLPATLAEVSGPGAT FT MAAWIITGIGSIFLALSFARLGSKIPKTGGPYQYAKIAFGDFVGFTNAWLYWSATCISN FT AAIITAIASYSSSLVPVLKTNGLYAFLYTSAILWAFNILNIIGVKQASAFETVITIFKL FT GVFLVFVIIGFANFNPQYITPAFPKGKGFSTVPLAAATTLWAFSGFESASIAAGEIKSA FT EKNVKLSTIYGLLIAVLVYLVISFVAMGGLPQDMLAKSNSPMSDILALHLSSNAVNLFL FT LAIVITIFGTIAGWIMLTARISYAAAVDGMFPQAFAKIHPKYRTPHVGIIINGILTNIV FT LLMNYTGSMTSAYNFMILLATLAYLPVYAITNAADILLLSKREEKFNVGNFIINSVVPL FT IGFIYAIWAVYGTGAESALYGLLLGLMGIPFYIYMKMKDKKQMEKIRKQQ" FT misc_feature order(624952..625011,625054..625122,625183..625251, FT 625294..625362,625375..625443,625501..625569, FT 625606..625674,625744..625812,625900..625959, FT 625987..626055,626074..626142,626152..626220) FT /note="12 probable transmembrane helices predicted for FT CBO0529 by TMHMM2.0 at aa 12-31, 46-68, 89-111, FT 126-148,153-175, 195-217, 230-252, 276-298, 328-347, FT 357-379,386-408 and 412-434" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 624961..626253 FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 105.1, E-value 1.4e-28" FT /inference="protein motif:Pfam:PF00324" FT CDS 626620..627129 FT /transl_table=11 FT /locus_tag="CBO0530" FT /product="putative transferase" FT /db_xref="GOA:A5HZ74" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:A5HZ74" FT /protein_id="CAL82083.1" FT /translation="MICEYNGKKPIIKKNVFLAKSADLIGDVVLEENCTVLFGAVLRGD FT INSIHIGNGSNVQDNCILHVDEGDLNIYIGDNVTVGHGAILHGCKINDNSLIGMGAIIL FT NGAEIGSNTIIGAGSLITSNKKIPSGVLCMGSPAKVIRELNEEEIASIKESAEDYLTLN FT KNFNRE" FT misc_feature 626761..626814 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 4.6,E-value FT 27" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 626830..626883 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 15.7,E-value FT 0.12" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 626899..626952 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 16.2,E-value FT 0.08" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 626953..627006 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 10.0,E-value FT 6.1" FT /inference="protein motif:Pfam:PF00132" FT CDS 627174..628046 FT /transl_table=11 FT /locus_tag="CBO0531" FT /product="putative metallo beta-lactamase superfamily FT hydrolase" FT /db_xref="GOA:A5HZ75" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:A5HZ75" FT /protein_id="CAL82084.1" FT /translation="MKIKTPRTFLVFIVVVSFFCIKAFAKDRNPEVHFIDTGQSDCILI FT KTGKENYLIDTGWEYYSGKVLSYLNSNNVDKIDGVILTHYHDDHYGGLEMLLKTSKVRK FT IFLPKHDSDDKKKVISTIKKHKVNYAWIEDGWEVKGRKLNLKAIVPINVDSKNENNNSI FT VLFGKIDGVKYLFLGDCEKREEMDMISNKKIKECDVLKVSHHGFKTSNSDELLDIAKPK FT IAIVTCDGIYSPDRIIIDRLKNKGIEVFTTSNKGNLIIREQEIIWNRYSYYINKGKNFM FT GNTYLKFIS" FT sig_peptide 627174..627246 FT /locus_tag="CBO0531" FT /note="probabilty 0.999, with cleavage site probability FT 0.714 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 627288..627866 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 57.0, FT E-value 4.3e-14" FT /inference="protein motif:Pfam:PF00753" FT repeat_region 628125..628310 FT /note="intergenic repeat 1" FT repeat_region complement(628157..628215) FT CDS complement(628367..630985) FT /transl_table=11 FT /locus_tag="CBO0532" FT /product="putative cations-transporting ATPase" FT /EC_number="3.6.3.8" FT /db_xref="GOA:A5HZ76" FT /db_xref="InterPro:IPR000695" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR004014" FT /db_xref="InterPro:IPR005782" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006068" FT /db_xref="InterPro:IPR006408" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023298" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR023300" FT /db_xref="InterPro:IPR023306" FT /db_xref="UniProtKB/TrEMBL:A5HZ76" FT /protein_id="CAL82085.1" FT /translation="MWFNKTSQEILEELAVDPSKGLSSEEIEKRREKYGLNKLNSKKQK FT SLLKMFFEQLNDILIYILLAAAIISGILGEVSDALIIGIVVIINTVIGVVQESKAEKAL FT DALKQLSTPKALVKRNGENIEIPSEDVVPGDVIVLDAGRYVPCDLRLIETANLKIEESA FT LTGESVPVEKHAKEKLEDPKTPLGDQKNMAFMSTLATYGRGIGIAVGTGMNTEIGKIAK FT MLEGEDKELTPLQKKLAELGKILGFAALGICALMFIIALFQKRDILEMFLTAISLAVAA FT IPEGLPTIVTIVLAMGVQKMIKENAIIRKLPAVETLGAVNIICSDKTGTLTQNKMTVIK FT FYANKEMQDIDKLNIEDSIHKMLLENLVLCNDATFSKDSSTGDPTEIALLEAGAKYNII FT KNNIENEHKRIDEIPFDSDRKLMTTVNNFDDKNYVMTKGAIDNLLKISTNAYINGEVVP FT LTDEIKQNIMNASNEMSKNALRVLGAAYKTLEDNNYNKESLESNLTFIGLVGMIDPPRE FT SVKDSIFECKNSGIKTIMITGDHKITAFAIAKELGIAEDESQAIFGYELDDMSDTELSS FT KIENLRVFARVSPEHKVKIVKALKSKGNIVSMTGDGVNDAPSLKAADIGVAMGITGTDV FT AKGASDMVLTDDNFSTIVSAIKEGRNIYNNIKKSIIFLLSCNLGEILALFIGILLGWPS FT PLRPIHLLWVNLITDSLPALSLGIDPGDPDIMDEKPRNPKESLFAGGAGISLILNGLLI FT GTLTLVAFEVGRIRYSDSLMHAQTMAFVVLSVSQLFHSLNMRHPKKSIFQLGLFTNKYL FT LASVIFGIFLQEMVITIPFLASIFKVFDLTMQDWIFVFALSIIPLVINEIVKFFKRLKN FT K" FT misc_feature complement(628376..628804) FT /note="Pfam match to entry PF00689 Cation_ATPase_C, Cation FT transporting ATPase, C-terminus, score 127.7, E-value FT 2.3e-35" FT /inference="protein motif:Pfam:PF00689" FT misc_feature complement(order(628397..628450,628487..628555, FT 628703..628771,628910..628978,630104..630172, FT 630200..630256,630701..630754,630767..630835)) FT /note="8 probable transmembrane helices predicted for FT CBO0532 by TMHMM2.0 at aa 54-76, 81-98, 247-265, FT 275-297,673-695, 742-764, 814-836 and 849-866" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(629090..630028) FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 81.0, E-value 2.5e-21" FT /inference="protein motif:Pfam:PF00702" FT misc_feature complement(629990..630010) FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT /inference="protein motif:ProSite:PS00154" FT misc_feature complement(630038..630745) FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 354.3, E-value 1.3e-103" FT /inference="protein motif:Pfam:PF00122" FT misc_feature complement(630761..630985) FT /note="Pfam match to entry PF00690 Cation_ATPase_N, Cation FT transporter/ATPase, N-terminus, score 96.5, E-value FT 5.6e-26" FT /inference="protein motif:Pfam:PF00690" FT CDS complement(631279..631815) FT /transl_table=11 FT /locus_tag="CBO0533" FT /product="probable chromate transport protein" FT /note="Similar to the C-terminal region of Pseudomonas FT aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE FT (SWALL:P14285) (416 aa) fasta scores: E(): 2e-08, 28.24 38d FT in 177 aa" FT /db_xref="GOA:A5HZ77" FT /db_xref="InterPro:IPR003370" FT /db_xref="UniProtKB/TrEMBL:A5HZ77" FT /protein_id="CAL82086.1" FT /translation="MKALLELFFSFLKIGMFSFGGGYAMLPLIEREIVHNKHWINYKSF FT IDIIGISQMTPGPIAINSATFVGYKVAGFKGSLVATLGVITFSFILVTIATHFIIKFKE FT SNILKSALMGMRPALIGLIIYAFLNLASQSYVDLKSIIIGIITFILLLSKKIHPILIIV FT ISGLLGIIFYGLIPF" FT misc_feature complement(order(631288..631341,631360..631413, FT 631423..631482,631516..631584,631729..631797)) FT /note="5 probable transmembrane helices predicted for FT CBO0533 by TMHMM2.0 at aa 7-29, 78-100, 112-131, 135-152 FT and 159-176" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(631291..631812) FT /note="Pfam match to entry PF02417 Chromate_transp,Chromate FT transporter, score 130.0, E-value 4.5e-36" FT /inference="protein motif:Pfam:PF02417" FT misc_feature complement(631573..631620) FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT /inference="protein motif:ProSite:PS00225" FT CDS complement(631815..632351) FT /transl_table=11 FT /locus_tag="CBO0534" FT /product="probable chromate transport protein" FT /note="Similar to N-terminal region of Pseudomonas FT aeruginosa chromate transport protein ChrA SWALL:CHRA_PSEAE FT (SWALL:P14285) (416 aa) fasta scores: E(): 2e-07, 28.35 38d FT in 134 aa" FT /db_xref="GOA:A5HZ78" FT /db_xref="InterPro:IPR003370" FT /db_xref="UniProtKB/TrEMBL:A5HZ78" FT /protein_id="CAL82087.1" FT /translation="MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDF FT LDILVISQSFPGALAVNCSTFIGYKINNLPGAILALLGTILPSFFIILCIASFFMQFRN FT NYYVDLIFKGINGAVPVLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVIIIL FT LSGIYGYIFLRKRVK" FT misc_feature complement(631827..632348) FT /note="Pfam match to entry PF02417 Chromate_transp,Chromate FT transporter, score 126.5, E-value 5.1e-35" FT /inference="protein motif:Pfam:PF02417" FT misc_feature complement(order(631836..631925,631968..632036, FT 632055..632123,632265..632333)) FT /note="4 probable transmembrane helices predicted for FT CBO0534 by TMHMM2.0 at aa 7-29, 77-99, 106-128 and 143-172" FT /inference="protein motif:TMHMM:2.0" FT CDS 632525..633115 FT /transl_table=11 FT /locus_tag="CBO0535" FT /product="PemK-family protein" FT /db_xref="GOA:A5HZ79" FT /db_xref="InterPro:IPR003477" FT /db_xref="InterPro:IPR011067" FT /db_xref="UniProtKB/TrEMBL:A5HZ79" FT /protein_id="CAL82088.1" FT /translation="MKNLNDMNSEELGKYIKDTENQIHNLLDEYINRVNNKIDKNKNAK FT TLKEKAYALSKLYKYVEWVNDGIEMNNNVKNRIRIVPKRGEVWTCELGQNIGSEENKIR FT PVIIIQNDTGNQNGPTTIVVPISNRPKKIAVHISIRNGDFELAKGEKMEITGTVLAEQI FT RIVSKARLGRHVATLSDKFMQLLDSKIKISLDL" FT misc_feature 632771..633109 FT /note="Pfam match to entry PF02452 PemK, PemK-like protein, FT score 81.1, E-value 2.4e-21" FT /inference="protein motif:Pfam:PF02452" FT CDS 633562..633987 FT /transl_table=11 FT /locus_tag="CBO0536" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005585" FT /db_xref="InterPro:IPR024042" FT /db_xref="UniProtKB/TrEMBL:A5HZ80" FT /protein_id="CAL82089.1" FT /translation="MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKM FT LDDINKKGNRLAITKCYADVKAYKRMIKEYLKSVLEYMYSVKKDISFWQTQYFITVETV FT DEKLQELTEMLLSAEKENLDIAKTIDDITGLVVDIYK" FT misc_feature 633562..633984 FT /note="Pfam match to entry PF03885 DUF327, Protein of FT unknown function (DUF327), score 58.0, E-value 2.1e-14" FT /inference="protein motif:Pfam:PF03885" FT repeat_region 634119..634148 FT /rpt_family="CB.102" FT /rpt_type=INVERTED FT /rpt_unit_seq="gtgtctcaaaataaatttaattttgagaca" FT /inference="ab initio prediction:REPuter" FT CDS complement(634193..636109) FT /transl_table=11 FT /gene="nadE" FT /locus_tag="CBO0537" FT /product="glutamine-dependent NAD(+) synthetase" FT /EC_number="6.3.5.1" FT /db_xref="GOA:A5HZ81" FT /db_xref="InterPro:IPR003010" FT /db_xref="InterPro:IPR003694" FT /db_xref="InterPro:IPR014445" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR022310" FT /db_xref="UniProtKB/TrEMBL:A5HZ81" FT /protein_id="CAL82090.1" FT /translation="MNNSQYYIRVSTACPVTNVADIDFNIDNIKKCIDICIEKKSKLIV FT FPELCITSYTCGELFSQSLLISKALDGIHNICKYSIDKDVLIAIGSPLLYKNSLYNCAV FT VIFGGKILGIVPKSYLPNYSEFYEKRWFTEGYKIKSERINLPFQENIPFGVNLIFSDKI FT FKFAFEVCEDLWVTIPPSSYLALMGANIIGNLSASNEIVSKSDYRRNLVASQSGRCLAS FT YVYSSSGVYESSTDLVFSGHLLIGENGSILKENKRFQRENEVITSIIDIDKINSERLKN FT VSFTDNSMNMNLELEEITFQFAINDVGDFDRPIDRYPFVPSNEEKRAVRCKEIFNIQTS FT ALAKRLDHTNMKKAVIGISGGLDSTLALLVIAKTFDKLNIPRENIITITMPGFGTTDRT FT YNNAVSLCKHLNTTLKEINIVDAALQHFKDIGHDKDIHDVTYENVQARERTQILMDIAN FT KEGGLVIGTGDLSELALGWCTYNGDHMSMYSVNCSIPKTLVRYLVRYVAENEVAKEISE FT ILIDILDTPVSPELLPKDKEGNIVQKTEDIVGPYELHDFFLYYFIRQGATPDKIKQLAK FT IAFKDSYDKETIDKWFSYFIRRFFTQQFKRSAVPDGPKVGTISLSPRGDWRMPSDASFN FT LWK" FT misc_feature complement(634268..634942) FT /note="Pfam match to entry PF02540 NAD_synthase, NAD FT synthase, score 211.3, E-value 1.5e-60" FT /inference="protein motif:Pfam:PF02540" FT misc_feature complement(635225..636085) FT /note="Pfam match to entry PF00795 FT CN_hydrolase,Carbon-nitrogen hydrolase, score 2.2, E-value FT 5.5e-08" FT /inference="protein motif:Pfam:PF00795" FT CDS 636331..636771 FT /transl_table=11 FT /locus_tag="CBO0538" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR002810" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/TrEMBL:A5HZ82" FT /protein_id="CAL82091.1" FT /translation="MWSNFDIIVWIIIGTAALLLDLATSSFLFVWFTLGAIAALIVQIL FT GYSMYIQIIVFTLISILCMILGYPMVKKIIKKQENSILSIERNYVGEIFIADKDIRDEG FT VLKFQGVYWRVTNSGNHIKKGDKVKINSVKGNKIFVKKVEEE" FT misc_feature order(636349..636417,636475..636543) FT /note="2 probable transmembrane helices predicted for FT CBO0538 by TMHMM2.0 at aa 7-29 and 49-71" FT /inference="protein motif:TMHMM:2.0" FT CDS 636774..637769 FT /transl_table=11 FT /locus_tag="CBO0539" FT /product="putative membrane protein" FT /db_xref="GOA:A5HZ83" FT /db_xref="InterPro:IPR001107" FT /db_xref="InterPro:IPR001972" FT /db_xref="UniProtKB/TrEMBL:A5HZ83" FT /protein_id="CAL82092.1" FT /translation="MAILAIVLLVIILVTFLMSIKVVNTGYVSIVERFGKYHRTLEPGW FT HIIMPFADFVRKKISTKQQIIDIDPQSVITQDNVKISIDNVIFYKIMNSKDAVYNIEDY FT KAGITYSTITNMRNIVGNMTLDEVLSGRDKINSKLLEQIDEITDAYGIKILSVEIKNID FT PPREIQEAMEKQMRAERDKRAAILQAEGEKQSEIARAEGEKQAKILQSEAEKEANIRRA FT EGLRESQLLEAEGKARAIEQIANAESEAIRKVNASIIESGTNEVVIALKQVDALKEMAK FT NPANKLILPNETLSSLGSIAAIGDLLNKDSKKDNNIINKMTNKIVNKDNK" FT sig_peptide 636774..636846 FT /locus_tag="CBO0539" FT /note="probabilty 0.891, with cleavage site probability FT 0.296 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 636792..636860 FT /note="1 probable transmembrane helix predicted for CBO0539 FT by TMHMM2.0 at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 636831..637352 FT /note="Pfam match to entry PF01145 Band_7, SPFH domain / FT Band 7 family, score 240.6, E-value 2.4e-69" FT /inference="protein motif:Pfam:PF01145" FT CDS 637803..637943 FT /transl_table=11 FT /locus_tag="CBO0540" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZ84" FT /protein_id="CAL82093.1" FT /translation="MDVFLSNNYEIKLEEILWDIPYIIVIELIIVDYKNKGMLPNINFM FT I" FT CDS 638132..638941 FT /transl_table=11 FT /locus_tag="CBO0541" FT /product="putative membrane-associated protease" FT /db_xref="GOA:A5HZ85" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5HZ85" FT /protein_id="CAL82094.1" FT /translation="MDKSEVTESNFELSVLGALAIAMFVVVGFYFFPTPFNMMLETTYV FT NSNKVLELVLSVLIDLISKGLIIMFILKIIRADIEPSFKIKYIEKFNFKILLCTAFFIL FT GFFMWFQNSIGTMIIKVLLPKEAIEVAAKDTQNLYQIFILEVIIAPIFEEIVFRGIILE FT GLLNKYKPITGIIVSSVVFALCHIYIPQIINAIIFGMLVGIIYYKTRSVVLCMVSHMLT FT NGFNFLYINSNIRTFFVGAAIFIISGILLEKYIRELKCDGTNISSAG" FT misc_feature order(638168..638236,638279..638347,638408..638461, FT 638549..638617,638654..638752,638810..638878) FT /note="6 probable transmembrane helices predicted for FT CBO0541 by TMHMM2.0 at aa 13-35, 50-72, 93-110, FT 140-162,175-207 and 227-249" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 638549..638821 FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 86.6, E-value 5.2e-23" FT /inference="protein motif:Pfam:PF02517" FT misc_feature 638609..638683 FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT /inference="protein motif:ProSite:PS00043" FT CDS 639161..640396 FT /transl_table=11 FT /gene="pepP" FT /locus_tag="CBO0542" FT /product="xaa-pro aminopeptidase" FT /EC_number="3.4.11.9" FT /db_xref="GOA:A5HZ86" FT /db_xref="InterPro:IPR000994" FT /db_xref="InterPro:IPR007865" FT /db_xref="UniProtKB/TrEMBL:A5HZ86" FT /protein_id="CAL82095.1" FT /translation="MNKEFFMRNRKNLGESIEEGIIVIFAGKAPYKSADETYPFTPNRN FT FYYLTGIEEEQIILVITKKNKKIKEHLYIQRPDPVMARWVGATISEEEAEEVSGIENIG FT YVDKFFDDFPIFINRSGSNKVYLDLERREWEENFTPAQIFAKELREKYPYVKIENIYKG FT ISDLRTIKSKEEVELIKKAIDITKEGIYNMMKNIKPNMMEYEVEAYFDFSLKKNGVTDY FT AFETIAAAGKNATVLHYSENNCKIENNSLILCDLGAQHKYYNGDITRTFPANGKFTERQ FT KEVYKVVLEANKAIIQNAKPGVTFKEIEDITKKILTEGCKKLGILQDKKELRKYYFHSF FT GHYLGLDTHDVGSYEVKLKPGMVITNEPGLYIEEESIGIRIEDDLLITEDGCEVLSKDI FT IKSIEEIENFMK" FT misc_feature 639161..639568 FT /note="Pfam match to entry PF05195 AMP_N, Aminopeptidase P, FT N-terminal domain, score 58.8, E-value 1.3e-14" FT /inference="protein motif:Pfam:PF05195" FT misc_feature 639668..640375 FT /note="Pfam match to entry PF00557 FT Peptidase_M24,metallopeptidase family M24, score 200.8, FT E-value 2.1e-57" FT /inference="protein motif:Pfam:PF00557" FT repeat_region 640398..640714 FT /rpt_family="CB.37" FT /rpt_type=DIRECT FT /rpt_unit_seq="tggtttaaaaaagggatatgtggcgagatc" FT /inference="ab initio prediction:REPuter" FT repeat_region complement(640689..640722) FT repeat_region complement(640893..640989) FT CDS complement(641049..641510) FT /transl_table=11 FT /locus_tag="CBO0543" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZ87" FT /protein_id="CAL82096.1" FT /translation="MGDLMIFNVIVGFIIPWISGIVFYFTDRKILFTIAPFQSVIAFTV FT NSFGFFYKFWIIYPHEYSKFASIPYDLGIYPILSVYLIHYINKTKLNPYLLIMIVTIFT FT TFLEWLGILSGKVLYSNGWNLGFTFISYLIPYLLNYWFYIQLKKMKIFD" FT misc_feature complement(order(641079..641147,641175..641234, FT 641253..641312,641355..641423,641442..641501)) FT /note="5 probable transmembrane helices predicted for FT CBO0543 by TMHMM2.0 at aa 4-23, 30-52, 67-86, 93-112 and FT 122-144" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(641916..642071) FT /transl_table=11 FT /locus_tag="CBO0543A" FT /product="putative DNA-binding protein" FT /db_xref="GOA:A5HZ88" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5HZ88" FT /protein_id="CAL82097.1" FT /translation="MKQIDLAEKIGVRRETIVHLESGRYNPSLKMAMDIAKVFNATVEE FT LFKFED" FT CDS complement(642085..642546) FT /transl_table=11 FT /locus_tag="CBO0544" FT /product="putative acetyltransferase" FT /EC_number="2.3.1.-" FT /db_xref="GOA:A5HZ89" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HZ89" FT /protein_id="CAL82098.1" FT /translation="MRNKIIADFAKEVDIDIWMNLVEIVKEDFPGLIIEDYRKILKEGI FT QQRTALIVKDKTKAIGVLIFSYENKEIAFLAVHPQYRKEGIATALFNKMYNQFPKGTEI FT AVTTYRENDTKGKAARALYKRLGFIQDELIMEFGYPCQRFIFNDKYKRI" FT misc_feature complement(642160..642396) FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 44.5, FT E-value 2.5e-10" FT /inference="protein motif:Pfam:PF00583" FT CDS 642930..643142 FT /transl_table=11 FT /locus_tag="CBO0545" FT /product="putative [2Fe-2S] binding protein" FT /db_xref="InterPro:IPR007419" FT /db_xref="UniProtKB/TrEMBL:A5HZ90" FT /protein_id="CAL82099.1" FT /translation="MDNNANEQIMDKLKKVCICKNINRLTIKNAIKSGARTVEEVRKAT FT GAGTGACKGNRCTYTIEKLLEEYSK" FT misc_feature 642969..643136 FT /note="Pfam match to entry PF04324 fer2_BFD, BFD-like FT [2Fe-2S] binding domain, score 62.1, E-value 1.2e-15" FT /inference="protein motif:Pfam:PF04324" FT CDS 643614..643751 FT /transl_table=11 FT /locus_tag="CBO0546" FT /product="hypothetical protein" FT /note="Similar to the N-terminal region of Borrelia FT burgdorferi hypothetical protein Bb0224 bb0224 SWALL:O51242 FT (EMBL:AE001132) (94 aa) fasta scores: E(): 6.9, 46.42 38d FT in 28 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ91" FT /protein_id="CAL82100.1" FT /translation="MKVLRGEREITFRFIILIFSMIIVNSVKGIFIKEKDEREIIGFLF FT " FT misc_feature 643641..643709 FT /note="1 probable transmembrane helix predicted for CBO0546 FT by TMHMM2.0 at aa 10-32" FT /inference="protein motif:TMHMM:2.0" FT CDS 643933..644040 FT /transl_table=11 FT /locus_tag="CBO0547" FT /product="hypothetical protein" FT /note="Similar to the C-terminal region of Bacillus FT anthracis hypothetical protein ba3885 SWALL:Q81WT3 FT (EMBL:AE017036) (118 aa) fasta scores: E(): 4.6, 31.25 38d FT in 32 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ92" FT /protein_id="CAL82101.1" FT /translation="MKGNILEIMAYIFTFTAIILSSYMQKFMMENKKKI" FT misc_feature 643945..644004 FT /note="1 probable transmembrane helix predicted for CBO0547 FT by TMHMM2.0 at aa 5-24" FT /inference="protein motif:TMHMM:2.0" FT CDS 644106..645014 FT /transl_table=11 FT /locus_tag="CBO0548" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:A5HZ93" FT /protein_id="CAL82102.1" FT /translation="MKVILFILLILLLAIVFVISWRLTNVVIYPIVRKAEFTYQKEIEQ FT GGFVEEEFNKLKREEITIKSPFGYDLKGMYFPGKNPKKTVIICHGIKCNLYNSVKYMKI FT FMDKGFNGVIYDHRNHGSSGGENTTFGYYEKQDLKAVADWVFERNGEDSIVGIHGESMG FT AGTILQNAAIDDRIAFYVADCPYSSMKGILQLRLKRDYKLPSFPFIPVASFISKLRVGL FT FFSQVSPIKDIKRVETPILFIHGMEDEYIPKEMSIDMYKNKKIGIKDIYLAPNADHAES FT YIKNKKEYKEHIYEFLKKINL" FT sig_peptide 644106..644169 FT /locus_tag="CBO0548" FT /note="probabilty 0.947, with cleavage site probability FT 0.428 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature 644118..644177 FT /note="1 probable transmembrane helix predicted for CBO0548 FT by TMHMM2.0 at aa 5-24" FT /inference="protein motif:TMHMM:2.0" FT CDS 645282..645791 FT /transl_table=11 FT /locus_tag="CBO0549" FT /product="putative phage-related protein" FT /note="Similar to the C-terminal region of Xestia c-nigrum FT granulosis virus orf42 SWALL:Q9PZ01 (EMBL:AF162221) (379 FT aa) fasta scores: E(): 0.85, 22.81 38d in 149 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZ94" FT /protein_id="CAL82103.1" FT /translation="MDAKLYINKLENSYRSHFKIKKDIYFLENHLDMIAHCKLVNVRTM FT ITEKDIIDSFETNEFCFVKHLDNISKKTLDKHIDMLIEAEKLCVTPHKDHKSSYLTGIL FT ISENSIDDNIKQYVKKFKFAKAYKFYWFGWCDIRLILIDLKNNEVTTNKAGKFVKKVYQ FT KHFNKN" FT CDS 645801..647444 FT /transl_table=11 FT /gene="cstA" FT /locus_tag="CBO0550" FT /product="carbon starvation protein A" FT /db_xref="GOA:A5HZ95" FT /db_xref="InterPro:IPR003706" FT /db_xref="UniProtKB/TrEMBL:A5HZ95" FT /protein_id="CAL82104.1" FT /translation="MNSVVLLLSGIILFLIAYLTYGRWLAKHWGIDISKQTPAHTKFDN FT VDYCPADAKILLGHHFSSIAGAGPIAGPIQAAIFGWVPVMLWIVIGSIFIGGVHDFGSL FT FASIRHGGNSIGEIIRVNIGEKGKKLFNVFAWVTLVLVVAAFTDICASTFAYSPQTPEL FT LTGARSGTASILFIFLAMGFGFFVYRRNAPVGLSTVVGVALLFFCIYIGYRFPVLKLSK FT FQWQIILLIYITAASTMPVWLLLQPRDYLCSFLLYAMLIGAFIGILVLHPTMQLAPTTS FT FTVKGQTLFPFLFVTVACGAVSGFHSLVSSGTSSKQLNSEKDTQLIGYGSMLIEGVVAI FT IALIAVGYVAKAKGTPAEIFANSCATFMNSFGIPLAIGKVFVTLSFSAFALTSLDTATR FT IGRYIFQEFFQGSSEKQGEKKSIFTNMYVSTLITVFCALGLILYGYEKIWPIFGSANQL FT LAALALLSLTAWLARRGKKTIMIIIPMIFMFAVTLSALFLIIKSYLFGANPNYILGIMA FT VILLVLAIVLAVEAYNTLNKNKKANTNLGA" FT misc_feature 645801..647003 FT /note="Pfam match to entry PF02554 CstA, Carbon starvation FT protein CstA, score 314.3, E-value 1.5e-91" FT /inference="protein motif:Pfam:PF02554" FT misc_feature order(645813..645866,646029..646097,646197..646265, FT 646293..646361,646380..646439,646467..646535, FT 646548..646616,646659..646727,646776..646844, FT 646914..646982,647067..647135,647145..647213, FT 647232..647300,647328..647396) FT /note="14 probable transmembrane helices predicted for FT CBO0550 by TMHMM2.0 at aa 5-22, 77-99, 133-155, FT 165-187,194-213, 223-245, 250-272, 287-309, 326-348, FT 372-394,423-445, 449-471, 478-500 and 510-532" FT /inference="protein motif:TMHMM:2.0" FT CDS 647905..648594 FT /transl_table=11 FT /locus_tag="CBO0551" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR024425" FT /db_xref="UniProtKB/TrEMBL:A5HZ96" FT /protein_id="CAL82105.1" FT /translation="MKGKSSLGIIFLVIGLGIFLEALNLWDFGNVISSYWPMILIVIGI FT KKLLEKSVSYLNGIVLILLGAMFQLRNLNILYNVSKFFWAGIFLLIGFYLLSYKESFKP FT KDRAFFGGQNAEDFVKTGAIFSGARTKNYSKSFKGGSITTMFAGVDLDLLDAELSLDGA FT YIDVFVAFGGVDIMVPENWNVVITGIPIFGGWSNKTRNRNINNAGPTLKINCIAAFGGL FT DVKHYFN" FT sig_peptide 647905..647968 FT /locus_tag="CBO0551" FT /note="probabilty 0.676, with cleavage site probability FT 0.405 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(647932..648000,648061..648114,648127..648195) FT /note="3 probable transmembrane helices predicted for FT CBO0551 by TMHMM2.0 at aa 10-32, 53-70 and 75-97" FT /inference="protein motif:TMHMM:2.0" FT CDS 649514..651505 FT /transl_table=11 FT /locus_tag="CBO0552" FT /product="methyl-accepting chemotaxis protein" FT /db_xref="GOA:A5HZ97" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR004010" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR004090" FT /db_xref="UniProtKB/TrEMBL:A5HZ97" FT /protein_id="CAL82106.1" FT /translation="MKNKSIKRIISTLLIFVALIPILIVGVYTNYSQTKSLKSNFESST FT KNSVLSFKSMIAQKNKNNMESINTLANDGNAKNLLKNKDNANWLFYALEAFRSSHSEIT FT NVYLGTVKGNTIFSPKTDVVNSIDPRTRPWYKKAVEMKGDPIITEPYKDTSGTNSLMVT FT ISKAVVDEKDSLVGVIGMDIKLDDLSAIAKNTKIGKEGFVVLVDKNGSIIGHKDKEKLN FT KNIKDLNWPKEILNKGIIDKVKIDGKEYKVITEKDGATSWSIVGFLPYSEIQSELNKYY FT RMIVIISLLSLAGALAIGGLFSKKIINPIRKIEDALACMKDGDFTKSIDKGETSIYEME FT LIMDGINTVREETVKILDSLKSVSSDVKESSDILKNITEQSEMAGNEIVQVVQNIADAT FT SDQAQSMEGSLNSISDLSDKVENSMENSKEMVKESDIVRNIIKDSGQAVKGLKNKFELN FT SKSNQELANKIDTLAESSNQISIITETIQSITEQTSLLALNASIESARAGEAGKGFAVV FT AEEVRKLAEQSSTSASEIERVIFNINKEVKDILDKMYETIELEKDTKDKIDITDNAFNT FT IRKSIDKLEESIRNVNESQKIIYNNKNDILNKINEASSVSEEIAATTEEITASAEEQAA FT GLKEVVGSAEKLNSYSDTLNSLVKQFKI" FT sig_peptide 649514..649613 FT /locus_tag="CBO0552" FT /note="probabilty 1.000, with cleavage site probability FT 0.337 between residues 34 and 35" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(649541..649609,650351..650419) FT /note="2 probable transmembrane helices predicted for FT CBO0552 by TMHMM2.0 at aa 10-32 and 280-302" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 649952..650197 FT /note="Pfam match to entry PF02743 Cache, Cache FT domain,score 89.6, E-value 6.5e-24" FT /inference="protein motif:Pfam:PF02743" FT misc_feature 650363..650578 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 28.3, E-value 1.9e-05" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 650639..651502 FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 112.4, E-value 9e-31" FT /inference="protein motif:Pfam:PF00015" FT CDS complement(join(651631..652557,652557..653288)) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0553" FT /product="putative antibiotic resistance ABC transporter FT (pseudogene)" FT /note="Pseudogene. This CDS appears to have a frameshift FT mutation following codon 244. The frameshift occurs within FT a polymeric tract of (A)6." FT /db_xref="PSEUDO:CAL82107.1" FT /inference="protein motif:ProSite:Pseudog" FT misc_feature complement(651868..652350) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 118.6, E-value 1.2e-32" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(652042..652086) FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(652306..652329) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(652779..653204) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 98.5, E-value 1.4e-26" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(653160..653183) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 653982..654383 FT /transl_table=11 FT /gene="mscL" FT /locus_tag="CBO0555" FT /product="large-conductance mechanosensitive channel" FT /db_xref="GOA:A5HZ99" FT /db_xref="InterPro:IPR001185" FT /db_xref="UniProtKB/TrEMBL:A5HZ99" FT /protein_id="CAL82108.1" FT /translation="MKKIIEEFKDFAVKGNAIELAVGVVIGSAFGKIVTSLVEDIIMPL FT VGLLIGGIDFTGLKFSMNLSGKTVVSINYGNFIQAAVNFLIISFSIFLFIKLINKFKQN FT EEEEKDEPKISNEEILLREIRDLLKENKS" FT misc_feature 653991..654374 FT /note="Pfam match to entry PF01741 MscL, Large-conductance FT mechanosensitive channel, MscL, score 202.0, E-value FT 9.9e-58" FT /inference="protein motif:Pfam:PF01741" FT misc_feature order(654024..654083,654102..654155,654198..654266) FT /note="3 probable transmembrane helices predicted for FT CBO0555 by TMHMM2.0 at aa 15-34, 41-58 and 73-95" FT /inference="protein motif:TMHMM:2.0" FT misc_binding 654588..654693 FT /locus_tag="CBO0556" FT /bound_moiety="thiamin pyrophosphate" FT /note="TPP riboswitch (THI element)" FT CDS 654749..655432 FT /transl_table=11 FT /locus_tag="CBO0556" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR012651" FT /db_xref="UniProtKB/TrEMBL:A5HZA0" FT /protein_id="CAL82109.1" FT /translation="MQSLEWGKRFSETFSGFSDKMAEILKSPLSILAIIAFLVIFIAVF FT KLKKIKLNPRTITQIGIALALSTILNIFRIYRFPQGGSVTLGCMVPILLLTFAYGKEIG FT FLTGFLYGLISLITDPFILHPIQMLFDYPLPYLAIGLAGYFRNNKTLSISFAFFVKFLC FT HFISGVVFFGSFAPKGMGPIIYSLSVNVPIIGAEAIICIVIFKLIPAHRLLKSINPKYS FT LVAQG" FT misc_feature order(654830..654883,654911..654979,655016..655084, FT 655112..655180,655199..655267,655295..655363) FT /note="6 probable transmembrane helices predicted for FT CBO0556 by TMHMM2.0 at aa 28-45, 55-77, 90-112, FT 122-144,151-173 and 183-205" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(655565..655765) FT /transl_table=11 FT /locus_tag="CBO0557" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZA1" FT /protein_id="CAL82110.1" FT /translation="MITWDTNIINTNVAITKNTNAVDLAADAIISLMVVAVTTVVVDAT FT ALATYLEDVAVTALVVAAVIL" FT misc_feature complement(655640..655708) FT /note="1 probable transmembrane helix predicted for CBO0557 FT by TMHMM2.0 at aa 20-42" FT /inference="protein motif:TMHMM:2.0" FT CDS 655956..657092 FT /transl_table=11 FT /locus_tag="CBO0558" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004027" FT /db_xref="UniProtKB/TrEMBL:A5HZA2" FT /protein_id="CAL82111.1" FT /translation="MSCNNILEMNEKNNLKTLLNNLTKNDLTDIRKSLDIKGASKLNKK FT ELVQVLESELQNNLNTIISNIGFYEYIFLDRYFDEIEYINKNINKFDNAINNLKEKGII FT FEINGGKNKVVIPKELEDNIKENFLDKEEFNLGFYISKDILKVIQALLHYYGALSLEEL FT YKIIHRMSSNLKYGKDKNIEIEFDRSYLTNLLSDNNRSYYGIKKQDNTYYMEDVINLSY FT VLQGHKAVQYLDYKELSINYIRKFNKEEFYIKPLEKLKKYMKENLNLKEEKSNEVMYST FT SCLMKNAFSVDYIFKDIKGRIYLKNEEVERDIKDIITEINNNIEKWCLRGHSIKEIKSK FT EDKIYEKVEKVNNKGKIGRNDPCPCGSGKKYKKCCLNK" FT misc_feature 657030..657089 FT /note="Pfam match to entry PF02810 SEC-C, SEC-C motif,score FT 32.5, E-value 1e-06" FT /inference="protein motif:Pfam:PF02810" FT CDS 657580..657960 FT /transl_table=11 FT /locus_tag="CBO0558A" FT /product="GntR-family transcriptional regulator" FT /db_xref="GOA:A5HZA3" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZA3" FT /protein_id="CAL82112.1" FT /translation="MKIKFDDKIAIYIQIMNYVKQNIVNGSFQLGDKLPSVREFSKELT FT VNPNTLQRAYQELEREGIIFTQRGMGSFISKDKKIIERVKEEMSREIVQNFLEGMKKIG FT FKKEEILNLVRKELEREDINNG" FT CDS 657953..658648 FT /transl_table=11 FT /locus_tag="CBO0559" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZA4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5HZA4" FT /protein_id="CAL82113.1" FT /translation="MDKILTCSNLKKGYFNKNALNGLAMEVKKGKIVGLLGPNGSGKTT FT FLKIAAGILRYSSGEILIDGEAPGVNTKAKVAYLPDKNFLYKWMKIKDAIEFYKDFYKD FT FDEKKCNELLEFMNLDKESKVTSLSKGMLEKLLLTLTLSRKAKLYLLDEPLGGVDPVSR FT DKILDAIVNNYSEDSTIIVTTHLVNDIERIFDEVFFISEGEIALSGIAEELRMEKGMSI FT DELYKEVFQ" FT misc_feature 658040..658561 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 129.0, E-value 9.4e-36" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 658061..658084 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 658648..659409 FT /transl_table=11 FT /locus_tag="CBO0560" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZA5" FT /protein_id="CAL82114.1" FT /translation="MGKLIKYNLKCYYKEILILLSLIVLSNLGLFYKINKWPREIIFGL FT SIMILSFACLVVLIWNINMFSKDLYSDTSYLIFTLPVKGRSILGAKLITSIIQVILVNI FT VAGIFIYINFKNSSLAHQDIVAYLTFKNISIASIIAMFHYISFLLTIYVSVALSRVAIR FT KKKLGKLGSFGIFVGICIIVGKLSMWITKIFPQTIKLAINPNTIISGTVDGAKFSLNFV FT NVNIASTIFDIVFAVILFIVVSYLLQEKVEI" FT misc_feature order(658681..658740,658768..658836,658921..658989, FT 659047..659115,659152..659220,659320..659388) FT /note="6 probable transmembrane helices predicted for FT CBO0560 by TMHMM2.0 at aa 12-31, 41-63, 92-114, FT 134-156,169-191 and 225-247" FT /inference="protein motif:TMHMM:2.0" FT CDS 660226..661308 FT /transl_table=11 FT /gene="potA" FT /locus_tag="CBO0561" FT /product="spermidine/putrescine transport ATP-binding FT protein" FT /db_xref="GOA:A5HZA6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005893" FT /db_xref="InterPro:IPR008995" FT /db_xref="InterPro:IPR013611" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017879" FT /db_xref="UniProtKB/TrEMBL:A5HZA6" FT /protein_id="CAL82115.1" FT /translation="MIEVMVQLKNVSKKFLENKSLAVDKVSLDINKGEFLTILGPSGCG FT KTTTLRMIAGFEDQSDGQIFINGEEVSKVPAYKRCVNTVFQSYALFPHMNIFENVAFGL FT KVKNVPESKIKEKVTEMLKMVQLEGYGNRMPSELSGGQKQRVAIARAVINNPKVLLLDE FT PLGALDLKLRKQMQLELKQLQRKLGITFIYVTHDQEEALTMSDRIVVMNEGVIEHVGTP FT ADIYERPKTKFVANFIGETNLFEGKILEKDDNKYLLDEDDGEEILITGSPTSMTQEVCL FT AIRPERIKLSNNVDNGMVGIKVSVKERIYNGSVIKTVVVTQNGREFVVSEPISDVYSLD FT THNKNYVFATWNPKHAVVMH" FT misc_feature 660322..660867 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 219.6, E-value 5e-63" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 660343..660366 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 660637..660681 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 661308..662267 FT /transl_table=11 FT /gene="potB" FT /locus_tag="CBO0562" FT /product="spermidine/putrescine transport system permease FT protein" FT /db_xref="GOA:A5HZA7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5HZA7" FT /protein_id="CAL82116.1" FT /translation="MWGKFSSAFSNIFKKQLHNKNTDISLESKEGIRGKLKKSTPIFKT FT VGPVALWLITFFIVPLLLVLVVSFLSRGEYGDVTLPFTLKNYKRLIDPMYGQILIKTLM FT ISISTTLGCLIIGYPFAYFIGRSDKKYRGLLLLLVILPFWTNSLVRTYAWIILLKTEGV FT INTYLMRFGLIHSPMQMLYTDSAVFIGMLYIMLPFMVLPIYTSIEKLDMSYIEAANDLG FT ASPYKTFKEITLPLTLPGIIAGCMLVFIPTLGYFFISDLMGGSKTMLISNLIKNQFLTS FT RDWPFGSAIAVILIILMLIAISFYFKGNKPKKGIKEVN" FT misc_feature order(661449..661517,661611..661679,661713..661781, FT 661860..661928,662013..662081,662157..662225) FT /note="6 probable transmembrane helices predicted for FT CBO0562 by TMHMM2.0 at aa 48-70, 102-124, 136-158,185-207, FT 236-258 and 284-306" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 661602..662252 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 50.2, E-value 4.7e-12" FT /inference="protein motif:Pfam:PF00528" FT misc_feature 661926..662012 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 662270..664111 FT /transl_table=11 FT /gene="potCD" FT /locus_tag="CBO0563" FT /product="spermidine/putrescine transport system permease FT protein" FT /note="The N-terminal and C-terminal halves of this CDS are FT similar to Escherichia coli PotC and PotD,respectively. FT This indicate that this CDS resulted from a fusion between FT two adjacent CDSs." FT /db_xref="GOA:A5HZA8" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR001188" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:A5HZA8" FT /protein_id="CAL82117.1" FT /translation="MKSNKGLLSKIYATLVYVFLYLPIFVLVVFSFNKSKLNATFTGFT FT LDWYKNLINNVQILEALKNSLIIAFISTFFAVIIGTLAAIGMYRYKFKGKRAMEGLLYI FT PVVIPEIVMGISMLAFFSSLNLPAGLITLILAHITFCISYVIIVVRARLDGFDAALEEA FT AQDLGATPWQTLTKVTLPVISPGIISGALLAFTLSLDDVIISFFAAGPDSNTLPLKIFS FT MVKFGVTPEINALSTVMMVFTLSMVVIAEGIRRNMLKNKKVKKTLSFIVILLMVTGVGF FT TIFGNTAKTEKQVLNIFNWSEFLPQSVIEQFEKEYNVKVNYSTFSSNEEMLAKLMGGNV FT PYDLVVTSDYAIEIMTKQKLIQPIDKNNVPNLANIDKNVLDLAFDPKNTYSLPYMWGGN FT NIVIDKTKITKKITSFDDLWDSEFKNSMVILDDPRVMIGLALQKNGYSINSKNPKELQK FT AKEDLIKLMPNVKAFDSESPKTLLINGEASIGYVWGTEAYLAKLENPNLEVVLTKEGVI FT PQYDNFVIPKKAKNKKLAEEFINFIYKPEISAQVSEEFPYANPNKAAYPLMDKDKLNDI FT AVYPPREAVEGNELIKDVGETTKLYDDIWTEIKNSKR" FT sig_peptide 662270..662360 FT /gene="potCD" FT /locus_tag="CBO0563" FT /note="probabilty 0.614, with cleavage site probability FT 0.316 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(662288..662356,662465..662533,662567..662635, FT 662645..662713,662813..662881,662960..663028, FT 663065..663133) FT /note="7 probable transmembrane helices predicted for FT CBO0563 by TMHMM2.0 at aa 7-29, 66-88, 100-122, FT 126-148,182-204, 231-253 and 266-288" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 662453..663058 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 78.4, E-value 1.5e-20" FT /inference="protein motif:Pfam:PF00528" FT misc_feature 662726..662812 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT misc_feature 663068..663916 FT /note="Pfam match to entry PF01547 SBP_bac_1, Bacterial FT extracellular solute-binding protein, score 54.4, E-value FT 2.7e-13" FT /inference="protein motif:Pfam:PF01547" FT CDS complement(664468..665337) FT /transl_table=11 FT /locus_tag="CBO0564" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5HZA9" FT /db_xref="InterPro:IPR003313" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5HZA9" FT /protein_id="CAL82118.1" FT /translation="MNIKSSSSNIKRGYLKEDFRFFHLKDKKDMEFELHYHDFNKIIVF FT MSGNVSYLIEGKAYKLKPWDILFVSSNDLHKVIINNDEPYERIIIWVNSKFLEMHNRNN FT NNLLTCFQLSSKHKINLFRMEEHNISLIKHTLFSLESATKDREFGNIVLKNSLFIQLMV FT YLNRLFMNSNNHIGKKDIEYDKQIEEIINYIKENLQEDLSIDTLSSKFFINKYYLMHKF FT KSQTGYTLHKYIQQKRLAFSKSLIIKGYKITEIYLKCGFGDYSSFIRAFKKAYGISPKD FT YYKNFKNY" FT misc_feature complement(664486..664617) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 32.9, E-value 7.9e-07" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(664633..664773) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 36.7, E-value 5.6e-08" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(664648..664782) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT CDS 665650..666900 FT /transl_table=11 FT /locus_tag="CBO0565" FT /product="putative Sodium:dicarboxylate symporter" FT /db_xref="GOA:A5HZB0" FT /db_xref="InterPro:IPR001991" FT /db_xref="UniProtKB/TrEMBL:A5HZB0" FT /protein_id="CAL82119.1" FT /translation="MKVWENYKWSIILLISVIIGGIVGLIMGPRAEVVEPLGNLFLNLM FT FTAIVPLVFFSVASAIANMANMKRLGKILLSVFIVFTFTALIAAVIGVIGTLIINPTKG FT VDPSTMQKIMANTVNEIQNKEKVSMLQQIVNTVTVSDFALLFSRKNMLQIIIFSIIFGV FT STAMVGEKGKLVAKFLEAGSTVMIKMIDIIMYTAPIGLGCYFASVIGQLGPQIIEGYVR FT VFILYLILTLVYYFIMFSIYAYMSAGKTGVQLFWKNALAPSITSLATCSSAACIPVNLE FT STKNMGVPKDIRETVIPLGANTHKDGSVIGGVLKITFLLGLFGHDMTSFKAIITIIIVS FT YLIGAVMGAIPGGGLIGAMLIISIYGFAPEVLGIVAVISTIIDAPATLLNSTGNTVCAM FT MITRLVEGKDWVKKIIA" FT sig_peptide 665650..665746 FT /locus_tag="CBO0565" FT /note="probabilty 0.707, with cleavage site probability FT 0.352 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(665668..665736,665779..665847,665866..665934, FT 666100..666159,666220..666288,666316..666384, FT 666421..666489,666646..666714,666727..666795) FT /note="9 probable transmembrane helices predicted for FT CBO0565 by TMHMM2.0 at aa 7-29, 44-66, 73-95, FT 151-170,191-213, 223-245, 258-280, 333-355 and 360-382" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 665689..666861 FT /note="Pfam match to entry PF00375 SDF,Sodium:dicarboxylate FT symporter family, score 85.7, E-value 9.6e-23" FT /inference="protein motif:Pfam:PF00375" FT misc_feature 666376..666399 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region 666920..667149 FT CDS 667493..667642 FT /transl_table=11 FT /locus_tag="CBO0566" FT /product="putative membrane protein" FT /note="This CDS is similar to N-terminal region of FT Bradypodion setaroi NADH dehydrogenase subunit 2 and to FT C-terminal region of Clostridium tetani putative ABC FT transporter-associated permease. This small CDS could be a FT gene remnant." FT /db_xref="UniProtKB/TrEMBL:A5HZB1" FT /protein_id="CAL82120.1" FT /translation="MFFMIKKRLIALLVLIILIYIIKSKHTPNIIKNNVKSFLVQTIIS FT ALAI" FT sig_peptide 667493..667562 FT /locus_tag="CBO0566" FT /note="probabilty 0.982, with cleavage site probability FT 0.949 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT misc_feature 667517..667585 FT /note="1 probable transmembrane helix predicted for CBO0566 FT by TMHMM2.0 at aa 9-31" FT /inference="protein motif:TMHMM:2.0" FT CDS 668046..668690 FT /transl_table=11 FT /locus_tag="CBO0567" FT /product="putative metal-dependent phosphohydrolase" FT /db_xref="GOA:A5HZB2" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5HZB2" FT /protein_id="CAL82121.1" FT /translation="MNEDLLEKTLLYIKERFENDYSGHDYYHSIRVYKLATSICKEENG FT DLEIVQLASLLHDVDDYKLFGGNVGAYSNAETFLKDNKISDTKIKVICDIISSISFKGT FT GTQVPQSKEGKIVQDADRLDAIGAIGIARTFAYGGSKDRVLHIPNEIPRDNMNFEEYST FT SNGTTINHFYEKLLRLKYLMNTDTAKKIAESRHEYMEDFLTEFLNEWDGII" FT misc_feature 668118..668423 FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 43.3, E-value 5.7e-10" FT /inference="protein motif:Pfam:PF01966" FT CDS 668955..669071 FT /transl_table=11 FT /locus_tag="CBO0568" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZB3" FT /protein_id="CAL82122.1" FT /translation="MVTSTLLFPLKEEFSLKNNLYSYVKSPKLGDKSSMEYF" FT CDS 669092..669385 FT /transl_table=11 FT /locus_tag="CBO0569" FT /product="hypothetical protein" FT /note="Similar to C-terminal region of Thermoplasma FT acidophilum protease synthase and sporulation negative FT regulatory protein ta0375 SWALL:Q9HL56 (EMBL:AL445064) (154 FT aa) fasta scores: E(): 8.9, 30 38d in 70 aa" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HZB4" FT /protein_id="CAL82123.1" FT /translation="MKIMFVMDIIKLLLSREWQKILNKMLEMIYGTRGLGTKIFREFES FT RLKGKGINEITLVTTKDYRTEGFYKKEDYNQIMKWLLWRKNFNYIFIYFMRG" FT CDS 669389..670393 FT /transl_table=11 FT /locus_tag="CBO0570" FT /product="putative protease" FT /db_xref="GOA:A5HZB5" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5HZB5" FT /protein_id="CAL82124.1" FT /translation="MSEHSVSKKELILFLVVTFGFTAIMGIAMAFTYPKYKVDTFPLAQ FT MCYPATGVMMALLLNKKRRKELPIKFYGAYLFFTITLVLYILVQIFIFHKNPGWYVQYW FT TIIGSFALIIMYFSDEKDKIYAFGLKVGKNSRESIRYTLLFVILYLCAIFLGQLIFGNV FT KDFIAPFKDPKKLVGMFLLPLSFPLTFIVFFGEEYGWRYFLQTAFQERLGKRKGIIFLG FT IIWGIWHLPLNLFYYSPKTSFYSVINQLIVCIGYSVFFGFVYMKTKNIWAVSMIHFINN FT NLGAILYGGTGADVVLSGKAVLGNLFCIFVIYLPFLFSKEYSKKEAEVSNYSA" FT sig_peptide 669389..669476 FT /locus_tag="CBO0570" FT /note="probabilty 0.816, with cleavage site probability FT 0.579 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(669422..669481,669509..669565,669599..669667, FT 669683..669742,669803..669871,669914..669982, FT 670040..670099,670109..670177,670196..670264, FT 670274..670342) FT /note="10 probable transmembrane helices predicted for FT CBO0570 by TMHMM2.0 at aa 12-31, 41-59, 71-93, FT 99-118,139-161, 176-198, 218-237, 241-263, 270-292 and FT 296-318" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 669935..670252 FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 58.3, E-value 1.7e-14" FT /inference="protein motif:Pfam:PF02517" FT CDS complement(670707..671555) FT /transl_table=11 FT /locus_tag="CBO0571" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR001646" FT /db_xref="UniProtKB/TrEMBL:A5HZB6" FT /protein_id="CAL82125.1" FT /translation="MIHKDREIQESLKIDCKNCFGFCCTALYFSKSDGFPNDKEAGKPC FT INLDEEFKCKVHKELRKKGLKGCTAYDCFGAGQKVAKVTYKDENWKENPEISQQMFDVF FT LVMRQIHEMLWYLSEASRMQDDLNIKYKINNMITEIVKISNLDAVLLIKLDLVVYRSKV FT NALLLETSKFIRNKYKKGKSSNINHKKLIAGRLNLIGADLKKKRLVGENLSGALLIAAD FT LKGINLSGVDFLGADLRDTDLRGADLSRSIYLTQLQLNSAKGDISTQLPISLSRPEHWC FT D" FT misc_feature complement(670806..670925) FT /note="Pfam match to entry PF00805 FT Pentapeptide,Pentapeptide repeats (8 copies), score 49.4, FT E-value 8.2e-12" FT /inference="protein motif:Pfam:PF00805" FT misc_feature complement(671322..671516) FT /note="Pfam match to entry PF03692 UPF0153,Uncharacterised FT protein family (UPF0153), score 3.9,E-value 0.0029" FT /inference="protein motif:Pfam:PF03692" FT CDS 671994..672344 FT /transl_table=11 FT /locus_tag="CBO0573" FT /product="probable tRNA-binding protein" FT /note="Similar to the C-terminal regions of various FT methionyl-tRNA synthetase such as Escherichia coli FT methionyl-tRNA synthetase MetG, and similar over the entire FT length of certain proteins such as Pyrococcus abyssi FT fragment of methionyl-tRNA synthetase pyrab04130 or pab0278 FT SWALL:Q9V1L4 (EMBL:AJ248284) (109 aa) fasta scores: E(): FT 6e-11, 43 38d in 100 aa" FT /db_xref="GOA:A5HZB7" FT /db_xref="InterPro:IPR002547" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:A5HZB7" FT /protein_id="CAL82126.1" FT /translation="MVAPVKANINMDVLDKIDIRVGTIKLVEDVEKSDKLVKLSVDFGG FT FTRTILVGMKGERDNPKEIEGKQALFVVNLAPKKMAGEVSEGMLFDIGYADGIIPVLAQ FT PEKSIPNGTRVG" FT misc_feature 672048..672335 FT /note="Pfam match to entry PF01588 tRNA_bind, Putative tRNA FT binding domain, score 75.0, E-value 1.6e-19" FT /inference="protein motif:Pfam:PF01588" FT CDS 672518..673126 FT /transl_table=11 FT /locus_tag="CBO0574" FT /product="signal peptidase" FT /EC_number="3.4.21.89" FT /db_xref="GOA:A5HZB8" FT /db_xref="InterPro:IPR000223" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019757" FT /db_xref="InterPro:IPR019758" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:A5HZB8" FT /protein_id="CAL82127.1" FT /translation="MDKKKIIKEIKGWIFSILGAILIAGLVNSKVFAKVRVQQSSMENT FT LLTNEQLVVDKLSYNFVEPKKGDIIIFHENKEKGTIAEDTLEMVDNIISIFNNNNNSIE FT KDDRLIKRVIGIPGDEIHIKDGHLYLNGKRLEEPYVKGETIEREFKLPIQIPENKLFVL FT GDNRMISKDSRMFGLIDYKQVEGKAIYRVYPFDHIGNIK" FT sig_peptide 672518..672614 FT /locus_tag="CBO0574" FT /note="probabilty 0.998, with cleavage site probability FT 0.988 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 672518..673075 FT /note="Pfam match to entry PF00461 Peptidase_S26, Signal FT peptidase I, score 61.0, E-value 2.8e-15" FT /inference="protein motif:Pfam:PF00461" FT misc_feature 672545..672613 FT /note="1 probable transmembrane helix predicted for CBO0574 FT by TMHMM2.0 at aa 10-32" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 672848..672886 FT /note="PS00760 Signal peptidases I lysine active site." FT /inference="protein motif:ProSite:PS00760" FT misc_feature 672995..673036 FT /note="PS00761 Signal peptidases I signature 3." FT /inference="protein motif:ProSite:PS00761" FT CDS 673955..674656 FT /transl_table=11 FT /locus_tag="CBO0575" FT /product="two-component response regulator" FT /db_xref="GOA:A5HZB9" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR007492" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:A5HZB9" FT /protein_id="CAL82128.1" FT /translation="MHIGICGNDVEQRNYLKNHLIKIIKEAKLKCELFEFNCGEELLQN FT YEKMNIIFLDINMGKINGIEIAKKIREFDSVVEIIFVTKLVNYIHQAYEVRAYRYLLRP FT INYEIIKYVTLNCIKGIEAQKNLVIKYKGEIIILNIDEITYIEVMQKMLTIHTKDKDYT FT FKMTLSKFEKELSQHDFFRCHKSFLVNLNKVKEFKDNIINVNDTYIPISKYRSKEFRHK FT LTKILKNSIWL" FT misc_feature 673955..674320 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 36.4, E-value 7e-08" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 674330..674626 FT /note="Pfam match to entry PF04397 LytTR, LytTr DNA-binding FT domain, score 93.7, E-value 3.9e-25" FT /inference="protein motif:Pfam:PF04397" FT CDS 675270..675389 FT /transl_table=11 FT /locus_tag="CBO0576" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZC0" FT /protein_id="CAL82129.1" FT /translation="MRFIKNPSKKFQLGFCVACSTNCDNRCADQCVVVQPNSN" FT CDS 675429..675554 FT /transl_table=11 FT /locus_tag="CBO0577" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZC1" FT /protein_id="CAL82130.1" FT /translation="MKFIKKPSSKYVLGFCNACSENCHNDCSKQSGCGYCASYGV" FT CDS 676248..676394 FT /transl_table=11 FT /locus_tag="CBO0578" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZC2" FT /protein_id="CAL82131.1" FT /translation="MRYIIKRVNFKDGYCVVGCGENGCSSVCVNNCLRVCVVDCALNGG FT EAS" FT CDS complement(676419..676604) FT /transl_table=11 FT /locus_tag="CBO0579" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZC3" FT /protein_id="CAL82132.1" FT /translation="MGIYSYELSIMKVNMILVVIGLTLGSTIFMTIIAITTMTISRNIF FT PFFLSINYIFHDKTPI" FT misc_feature complement(676500..676568) FT /note="1 probable transmembrane helix predicted for CBO0579 FT by TMHMM2.0 at aa 13-35" FT /inference="protein motif:TMHMM:2.0" FT CDS 676913..678265 FT /transl_table=11 FT /locus_tag="CBO0580" FT /product="putative arylsulfatase regulatory protein" FT /db_xref="GOA:A5HZC4" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR023885" FT /db_xref="UniProtKB/TrEMBL:A5HZC4" FT /protein_id="CAL82133.1" FT /translation="MKKSKYNKIIKLEDGKTIAFNSVTCALAEVDQDFLAVLANIENID FT IENLDEKKRELVENMSKGNYIVHDDMDELKLLKYRNYNGKFSSGALGLVIAPTLACNFA FT CPYCYETPKAGLMDKKVQDSLIEMIEENAKNKNNISITWYGGEPLLAKEMIFDFSQRAI FT EICERENVKYSAYIVTNGYLIDEETIENMKKAKITGAQITVDGPPSIHNKRRILKNSDE FT ETFTTIMANVKKLIEGGIKNIAIRINVDKTNVDHVEELLDILEENGLKDVVVNLGHVTA FT YTDSCNGIANNCLNTKEYAKSDTKYQKVLFERGYKVAGAYPFYPSVKANYCCADNVGAY FT VIDSEGYMYKCWNDVGNVDRAVGNVTTIKDKVDEKMYARNMEYILWSPFEYEECKECSI FT LPICMGGCPYKGTMNEKPECEKWIYNLEETIIATYNQKNEAECSQQGCCCE" FT misc_feature 677195..677704 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 81.3, E-value 2.1e-21" FT /inference="protein motif:Pfam:PF04055" FT CDS 678258..678848 FT /transl_table=11 FT /locus_tag="CBO0581" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZC5" FT /protein_id="CAL82134.1" FT /translation="MNNLNFHIKDLRVLRDIESYLDFYNRAMNIKNVFNFNDKVIVDVI FT DSLEELSEILEVKVPKWVIGTSFEDVILILDHDKWKKSNNESVENLILHEFVHVVLNLK FT TQSPLPIWLNEGLAVYLSDQYGNYKGKKPNINEDFDFYNVNYNNEKLYDISIYIIMKLI FT DKYSINKVINETLKTKNFKQSKMFSNESLLELL" FT misc_feature 678528..678557 FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS 678885..679382 FT /transl_table=11 FT /locus_tag="CBO0582" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HZC6" FT /protein_id="CAL82135.1" FT /translation="MREDIEIYKAGISDMDKITDLIVSINEKKTKITKYDDFNFYHSKN FT SLKEVLNGKNKNEMIFIARSKENFIGMINLSFRDSDYLFFIDKFLYIKYLYVDKDKFID FT TQEYKDIAKKLFEAAISEAKKYGFKYICGDVLSEEEELRKLFEINDMKNYKNRLYKKIN FT TM" FT CDS 679417..681129 FT /transl_table=11 FT /locus_tag="CBO0583" FT /product="ABC transporter ATP-binding/permease protein" FT /db_xref="GOA:A5HZC7" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:A5HZC7" FT /protein_id="CAL82136.1" FT /translation="MKKILNNVWGVAKKYKGKELIGLIFTILYTVAIFISPMVSRYLID FT SVIPSNSIYKLKIGILIFFGGCICQPIFGYLKNRVFMGISENITIMFREKMFNKVIDAP FT MEFFDGCSNGAIVSRISNDGRSVSEFITNFFVVVVKNIVLIIMIIIGMLMLSKEITLMV FT IFLYAIYFFINWKISRKFNPMSKSIQESYDQICIKINRSVGSINTIKAFNQEEKVKREF FT KEIIEKNYTNNLKFRKLSMLMNSISNGIMIASLSIVYGMGSLLVMDGKITIGTVVAMGL FT YFQLLVQPIYELLNSNIDIHTIVPIFNRINEYINLKTERVNKENNELSFLKEIEFKDVS FT FKYNNGSQAINNINFKLPSKGIFAIVGDSGAGKSSLIKLLSAFYDSYGGEIKINEKELK FT EYGAKDIRKVISLVSQDIELVNESIKNNIKMGRNIKDSKIKEVVKSLSLEKTIEKLELG FT YDTIVNERANLSGGEKQRLSIARALVKESLIYIFDEPTAALDTINEKRVKDILEELSKE FT KLVIIITHNLSLLNKAQCIYTIKQGEIVEEGDYEYLTKQDSYFSKLMKELSKK" FT misc_feature 679471..680286 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 129.1, E-value FT 8.6e-36" FT /inference="protein motif:Pfam:PF00664" FT misc_feature order(679477..679545,679588..679644,679813..679881, FT 679891..679950,680149..680217) FT /note="5 probable transmembrane helices predicted for FT CBO0583 by TMHMM2.0 at aa 21-43, 58-76, 133-155, 159-178 FT and 245-267" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 680494..681042 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 175.4, E-value 9.9e-50" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 680515..680538 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 680821..680865 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 681239..681988 FT /transl_table=11 FT /locus_tag="CBO0584" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:A5HZC8" FT /protein_id="CAL82137.1" FT /translation="MNKIIIGFTLIIIATLTLTSCSKKNKIKFDDEIAPYTKKETNEFN FT YKINSDTVKIKSNCGNLKIKRGDVDEVKVTIEKLVGGKSQDKLQEALNSISCTLEDETI FT NISLSSKDNSSISSVNIETTIVIPKKISSLNIENNVGNIELEGNYKDLKVQMENGNISY FT KGELEKSNISSKVGNINLNLQQLESNYQYEINGETVNVNIKVPNKSKINLIGSMANKIK FT VEDSGNISEDGAVFDINVKTGNVKIEN" FT sig_peptide 681239..681302 FT /locus_tag="CBO0584" FT /note="probabilty 0.915, with cleavage site probability FT 0.607 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature 681248..681301 FT /note="1 probable transmembrane helix predicted for CBO0584 FT by TMHMM2.0 at aa 4-21" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 681269..681301 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 682011..682490 FT /transl_table=11 FT /locus_tag="CBO0585" FT /product="putative GnaT-family acetyltransferase" FT /db_xref="GOA:A5HZC9" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HZC9" FT /protein_id="CAL82138.1" FT /translation="MDFIVREAKLSDLDNILKLWRELSVDQLGKDNYYKGSLEFNCGDR FT QIKESIINDNCGIFVVEYNEEIHGFVEVWINRKDFAFEHNDYAYILHYYINENGRNVRN FT IFSIIYHLYKIAEEWAISKGKPYIISDAFEHNERIVKFLRRVGVSKYKTRMVRKI" FT misc_feature 682185..682457 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 22.0, FT E-value 0.0014" FT /inference="protein motif:Pfam:PF00583" FT CDS 682493..684955 FT /transl_table=11 FT /locus_tag="CBO0586" FT /product="putative permease" FT /db_xref="GOA:A5HZD0" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5HZD0" FT /protein_id="CAL82139.1" FT /translation="MFFKVAFNSIRKNKIRYMLLTCTLILSTIIMLSTSIIKDSAIKIR FT EDQLRKTTLNSQLVITTADEENPFFNPKGIINSIKDIDGISHIVPRIGGMAKDVKTLKD FT VNIIGVDLNKQKAAFPIELIDKYKVKDKENEIIINERYAKENSLKVGAKIKLLIGTKNK FT EFIISGISKNTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDHINNMIEKIK FT PKVSSKFIIQQRYDMDYFKSYVGTIDMALKIIGVLSIFITLFLTYSTFSLIIYERLHQI FT GILRSLGISKKDIKVSVIVENLLIVLSSIVIGSILTIPFVRLILNYIVQDGYFTLDLRK FT FLFIDLIIVIFSVLVILVSLRKILNMSVINLLKGIGKKYYTNKIGKIFKSSFGVLLLIV FT SIAILISEYKRENGTFALILGALFFIISFVFLAKLLLIMFNWIYQKIFSIFKGSVRILF FT KELVMQFSNIVDIVIITSIIICSIYVSVTLKDMINNGVMNVYSNADLMLSIDGTVEEDF FT TDKIKNIKYIKNSLLQSRTTEVIKDTKVDIAGIDGSQYKKDFSTEIIKKGEKNIFDKLD FT DGKNIIITTTFSKNTGINLNDSLKINEVNYKVIGVVSSFENMGKVLFLSKDNFNKDIKV FT KDKDLCLIKVNNKQIKSTTNEIEKLFKDKYENKYSIQELTVLNEENNNNNKKTFTIVNV FT LICISTIICIISMSNNVTINLLSRKKVYATKGALGISKGYLSKCILFEAIVLGSYSGIF FT GLGLGVTLSNYINKILSYYIGDMVFIKDYKIMVILVLISIGITVISYIYPMRKIYRINI FT IDEIKSDE" FT sig_peptide 682493..682604 FT /locus_tag="CBO0586" FT /note="probabilty 0.999, with cleavage site probability FT 0.504 between residues 38 and 39" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(682541..682600,683249..683317,683387..683455, FT 683513..683572,683651..683707,683735..683803, FT 683885..683953,684563..684631,684707..684775, FT 684842..684901) FT /note="10 probable transmembrane helices predicted for FT CBO0586 by TMHMM2.0 at aa 17-36, 253-275, 299-321,341-360, FT 387-405, 415-437, 465-487, 691-713, 739-761 and 784-803" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 683222..683596 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 69.8, E-value 6.2e-18" FT /inference="protein motif:Pfam:PF02687" FT misc_feature 684545..684928 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 70.7, E-value 3.3e-18" FT /inference="protein motif:Pfam:PF02687" FT CDS 684970..685650 FT /transl_table=11 FT /locus_tag="CBO0587" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZD1" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZD1" FT /protein_id="CAL82140.1" FT /translation="MSILKGINIKKKINIGDNSYDILKGINLGINEGEFLSIMGQSGAG FT KSTLLYILSGLDKPSEGSVLFENDYIFNMKDKRLSKLRRENFGFIFQFYNLIEGLNVED FT NISIIFEYEGVPKKKYKEKLEFLLNKVGLYEKRKCYPYQLSGGQQQRVAIARALITDPK FT IIFADEPTGSLDSNSGNNVLEILKSLNVNDKKTIVMVTHDKHAASFSNRIIEIKDGKID FT INNK" FT misc_feature 685066..685626 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 189.4, E-value 5.9e-54" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 685087..685110 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 685399..685443 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT repeat_region 685648..685680 FT repeat_region 685700..685772 FT CDS 686198..686482 FT /transl_table=11 FT /locus_tag="CBO0588" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZD2" FT /protein_id="CAL82141.1" FT /translation="MKLGVEKMNICEVKDNYNLFVKINYKSGDDKVLSKIKTHLNNKVL FT GERYLIGGGILNRKGSTLILKINSIEDIKEISSEKDVNYKLLAVPKILN" FT CDS 686613..686753 FT /transl_table=11 FT /locus_tag="CBO0589" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZD3" FT /protein_id="CAL82142.1" FT /translation="MILIIFAIIKLVEFLHRLYFYNKLKRLRYNKYIKFIISYFFESIV FT I" FT CDS 686811..687677 FT /transl_table=11 FT /locus_tag="CBO0590" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003797" FT /db_xref="UniProtKB/TrEMBL:A5HZD4" FT /protein_id="CAL82143.1" FT /translation="MEKIALITDTTSDLPEDILEKYNIKQLAFRIIYKDRELKDRFDIT FT SKEVYENLEVEVPTSSLPSMEDMDNLFTELEEEGYTHVIAVVLSSGLSGIYNGMKIVSE FT NHPKLTTYICDSKSISLGEGVLLMESARMLEEGKSFNQIVEAIPKIRENVKTFFVVGTL FT EYLKKGGRIGKVAGTIAELLNIKPIISIDNEDGKYYTYTKVRGRKQSLANLIDIAKEFL FT EKGKCKIYVMHGNAEEEAKAVFEKLKNLPNVTFAMLGGCISPVSGAHSGPGLVGVACLR FT DMDYCGN" FT misc_feature 687021..687656 FT /note="Pfam match to entry PF02645 DUF194, Uncharacterized FT protein, DegV family COG1307, score 232.8, E-value 5.1e-67" FT /inference="protein motif:Pfam:PF02645" FT CDS 688075..688587 FT /transl_table=11 FT /locus_tag="CBO0591" FT /product="putative membrane protein" FT /db_xref="GOA:A5HZD5" FT /db_xref="InterPro:IPR019264" FT /db_xref="InterPro:IPR022930" FT /db_xref="UniProtKB/Swiss-Prot:A5HZD5" FT /protein_id="CAL82144.1" FT /translation="MLSYYAFIFFAKIMEVALMTIRTVLITRGEKLYGSIIGFIEVTIW FT LYVTSSVLSGIKDDPIRMVVYALGFTCGNYMGCVIEEKLAIGLLTINVITSESDGKRLA FT EILRDENVGVTMVDAEGKIEQKKMLIIHAKRKRREEIIRTIEGSDINAMISVNDIKTVY FT GGYGIRK" FT misc_feature order(688084..688152,688171..688239) FT /note="2 probable transmembrane helices predicted for FT CBO0591 by TMHMM2.0 at aa 4-26 and 33-55" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(688634..688780) FT /transl_table=11 FT /locus_tag="CBO0592" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZD6" FT /protein_id="CAL82145.1" FT /translation="MIIIYVYIWIMQIINKALCINIRFFMKKLPKNTFNSNIANKKIHV FT INA" FT misc_feature complement(688703..688771) FT /note="1 probable transmembrane helix predicted for CBO0592 FT by TMHMM2.0 at aa 4-26" FT /inference="protein motif:TMHMM:2.0" FT CDS 689101..690993 FT /transl_table=11 FT /locus_tag="CBO0593" FT /product="putative sulfatase" FT /db_xref="GOA:A5HZD7" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR012160" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:A5HZD7" FT /protein_id="CAL82146.1" FT /translation="MKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILL FT PVVASVGVLLGIGYFLQKHKRTKFLYVLNIIISSIIIADLLYYRYYKDIISIGAIRNAF FT LLGGVASSITSLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILAGAI FT LLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAK FT EKELVDNFEGKSQIQGEKLKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWIN FT KSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVSGAAYYMYSGNQFKSLPSTLQDKGYYT FT AAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQ FT PFYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEG FT YLDNSIVVIYGDHNAVSKNYIQELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVD FT HTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKVTFRNGSFTDGKAFYISWTGEYY FT DIKTGEKITETEELKAKKQESAKDLESSDELLNHNLIKKLESESKGEGESEQSK" FT misc_feature order(689137..689190,689218..689286,689305..689373, FT 689383..689451,689545..689613) FT /note="5 probable transmembrane helices predicted for FT CBO0593 by TMHMM2.0 at aa 13-30, 40-62, 69-91, 95-117 and FT 149-171" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 689836..690759 FT /note="Pfam match to entry PF00884 Sulfatase, FT Sulfatase,score 68.0, E-value 2.1e-17" FT /inference="protein motif:Pfam:PF00884" FT CDS complement(691129..692541) FT /transl_table=11 FT /locus_tag="CBO0594" FT /product="Sigma-54 interacting protein" FT /db_xref="GOA:A5HZD8" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR002197" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:A5HZD8" FT /protein_id="CAL82147.1" FT /translation="MENYDNPICLEDLFSDENGEKFLSISVLQTAFNVAYEGLILIDEN FT YNILKINTMGLNILNSTEDKLKKYSIKDIIRNYKFIDDCLQNGVHKFSIDSSFLINNNS FT IRCITNIMPVKLQDSIIGAIISIRDTRHIHKLVNNVVGYKASYTFDDIITKNQKMKSII FT ELAKKASESDCSILIDGNSGTGKELFAQAIHNHSNRCHGPFVAVNCAAIPRELVESELF FT GYEKGAFTGASKGGYPGKFELADGGTIFLDEIGELPLDIQSKLLRVLDNLKIMRVGGTH FT EKKIDIRVLAATNRNLSEEVSNKNFRGDLYYRLNVINVHLIPLKDRVEDVEALTNCFVD FT KLNIKNPGNFKKIAPEFMDKLKAYHWPGNVRELRNIVERSYYICEDNIITDKFLNNKLM FT KNEHHNCCIGKEEPIVPLDILEHKAIEKALIHCKGNIVQASELLGISRATIYRKINKYN FT IDLNEILEDKQN" FT misc_feature complement(691171..691293) FT /note="Pfam match to entry PF02954 HTH_8, Bacterial FT regulatory protein, Fis family, score 58.0, E-value FT 2.1e-14" FT /inference="protein motif:Pfam:PF02954" FT misc_feature complement(691177..691242) FT /note="Predicted helix-turn-helix motif with score FT 1962.000, SD 5.87 at aa 434-455, sequence FT GNIVQASELLGISRATIYRKIN" FT misc_feature complement(691417..691446) FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature." FT /inference="protein motif:ProSite:PS00688" FT misc_feature complement(691420..692088) FT /note="Pfam match to entry PF00158 Sigma54_activat,Sigma-54 FT interaction domain, score 385.9, E-value 4.3e-113" FT /inference="protein motif:Pfam:PF00158" FT misc_feature complement(691780..691827) FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT /inference="protein motif:ProSite:PS00676" FT CDS complement(692876..694099) FT /transl_table=11 FT /locus_tag="CBO0595" FT /product="probable Na+ dependent nucleoside transporter" FT /db_xref="GOA:A5HZD9" FT /db_xref="InterPro:IPR002668" FT /db_xref="InterPro:IPR008276" FT /db_xref="InterPro:IPR011642" FT /db_xref="InterPro:IPR011657" FT /db_xref="InterPro:IPR018270" FT /db_xref="UniProtKB/TrEMBL:A5HZD9" FT /protein_id="CAL82148.1" FT /translation="MEKFISFIGIFVFLGICYLISENKKKVRFKLVFAGIIIQFIFAFL FT ILKTSIGKITFEKLSDFITAILGFTKNGSEFLFGGLVNNVDSFGYIFAFQVLPTIIFFS FT SLMAVLYYLGVMQFLIRHIANFMAKTLGTSGAESLSAAANIFVGQTEAPLIVKPYIEKM FT TRSELHSVMVGGMATVAGSVMAGYIGMGISSAHLLSASIMSAPAAFVAAKIIVPETEEP FT ITKGNVNCEVEKLDKNVIDAAARGASEGLQMALNVGAMLIAFVAIIAMLNAGLEGIGHL FT VGINGLNFENVLGYICAPFAYIMGIPSQDMLTAGSLIGQKTVINEFVAYSNLSTFIKQG FT TLNPRTVTILTYALCGFANFSSIAVQLGGIGELAPKRRSEIAQLGIKALIGGTVASFLT FT ACIAGILI" FT misc_feature complement(692879..694099) FT /note="Pfam match to entry PF01773 Nucleoside_tra2, Na+ FT dependent nucleoside transporter, score 665.2, E-value FT 3.5e-197" FT /inference="protein motif:Pfam:PF01773" FT misc_feature complement(order(692882..692950,692987..693055, FT 693188..693256,693275..693343,693521..693589, FT 693761..693829,693959..694018,694037..694090)) FT /note="8 probable transmembrane helices predicted for FT CBO0595 by TMHMM2.0 at aa 4-21, 28-47, 91-113, FT 171-193,253-275, 282-304, 349-371 and 384-406" FT /inference="protein motif:TMHMM:2.0" FT CDS 694305..694454 FT /transl_table=11 FT /locus_tag="CBO0596" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZE0" FT /protein_id="CAL82149.1" FT /translation="MANIVISVIIHRNISVTKEFAYLKILIINLFVGKRLIYSVFYIFK FT IVKL" FT misc_feature 694362..694430 FT /note="1 probable transmembrane helix predicted for CBO0596 FT by TMHMM2.0 at aa 20-42" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 694475..694505 FT /note="intergenic repeat 1" FT repeat_region 694561..694661 FT /note="intergenic repeat 1" FT misc_binding 694982..695245 FT /gene="asnS" FT /gene_synonym="tss" FT /locus_tag="CBO0597" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 695272..696663 FT /transl_table=11 FT /gene="asnS" FT /gene_synonym="tss" FT /locus_tag="CBO0597" FT /product="asparaginyl-tRNA synthetase" FT /EC_number="6.1.1.22" FT /db_xref="GOA:A5HZE1" FT /db_xref="InterPro:IPR002312" FT /db_xref="InterPro:IPR004364" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004522" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018150" FT /db_xref="UniProtKB/Swiss-Prot:A5HZE1" FT /protein_id="CAL82150.1" FT /translation="MDITLVKSLYRETEKHMDKEVKINGWVRTVRDSKNFAFVEVNDGS FT FFKNVQVILESSLENFKELCKMPISTSVEVEGIVQPTPNAKQPFEIKATRISIEGKSST FT DYPLQKKRHTFEYLRTIAHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIIT FT GSDCEGAGEMFQLTTMDLNNIPKTEEGKIDFSKDFFGSPANLTVSGQLSAETFALAFRN FT VYTFGPTFRAENSNTARHASEFWMIEPEMAFAELTDYLDNAEDMVKFVINYVMENAPEE FT MAFFNSFVDKGLFDRLDNVVNSDFKRITYTEAVELLQKSGVKFDYEVEWGIDLQTEHER FT YLTEQIFKKPVFVTDYPKDIKAFYMRLNDDGKTVAAADLLVPGVGEIIGGSQREERLDV FT LEKRMEELNLNKEDYWWYLELRKYGETKHSGYGLGFERILMYITGMTNIRDVIPFPRTP FT GSAEF" FT misc_feature 695332..695568 FT /note="Pfam match to entry PF01336 tRNA_anti, OB-fold FT nucleic acid binding domain, score 38.5, E-value 1.5e-08" FT /inference="protein motif:Pfam:PF01336" FT misc_feature 695611..696648 FT /note="Pfam match to entry PF00152 tRNA-synt_2, tRNA FT synthetases class II (D, K and N), score 447.7, E-value FT 1e-131" FT /inference="protein motif:Pfam:PF00152" FT misc_feature 695959..696015 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT /inference="protein motif:ProSite:PS00179" FT misc_feature 696565..696594 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT CDS 696957..697277 FT /transl_table=11 FT /locus_tag="CBO0598" FT /product="PadR-family transcriptional regulator" FT /db_xref="InterPro:IPR005149" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZE2" FT /protein_id="CAL82151.1" FT /translation="MARKDSIEIGELTDSAFYILASVIEEKHGYLIMKVIEKFTNGEVT FT IGPASLYTTLKKLLISGLVELNPNIHENKKVYRITDKGKEMLVQEINRKKQMITFAENF FT LK" FT misc_feature 696987..697226 FT /note="Pfam match to entry PF03551 PadR, Transcriptional FT regulator PadR-like family, score 44.1, E-value 3.2e-10" FT /inference="protein motif:Pfam:PF03551" FT CDS 697284..697829 FT /transl_table=11 FT /locus_tag="CBO0599" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR021359" FT /db_xref="UniProtKB/TrEMBL:A5HZE3" FT /protein_id="CAL82152.1" FT /translation="MISMKNKYVMIGGFAFSEESDMEKLRNYAKKGWILERVVGGFFYK FT LRKDEPQDIIYSLDYQKDVNEEYFHMFKEAGWNIVISLGNEMHIFSAQYGTKPIYSDFK FT SNLGKYISMQNTVGKSAVYSLIVGIILIVLSFFINNIFLTGLLLIDFIVFIFSFMPYVA FT YSYRIKKMKKYNKNKRNL" FT misc_feature order(697641..697709,697719..697787) FT /note="2 probable transmembrane helices predicted for FT CBO0599 by TMHMM2.0 at aa 120-142 and 146-168" FT /inference="protein motif:TMHMM:2.0" FT CDS 698032..698487 FT /transl_table=11 FT /locus_tag="CBO0600" FT /product="putative transcriptional regulator" FT /db_xref="InterPro:IPR007492" FT /db_xref="UniProtKB/TrEMBL:A5HZE4" FT /protein_id="CAL82153.1" FT /translation="MKISIEVDNKIKENEVIIRCSEISKDVKNIQIMLNDMLSHKKQIT FT FYRGDTEYYLSLEEILFFETEENGICAHTIDNIYNVKYKLYELEEFLPGYFMRVSKSTI FT LNTNHIYSITRRISSSSKIEFQNTHKQVYVSRYYYKPLKIKLLEKRK" FT misc_feature 698158..698472 FT /note="Pfam match to entry PF04397 LytTR, LytTr DNA-binding FT domain, score 75.5, E-value 1.2e-19" FT /inference="protein motif:Pfam:PF04397" FT CDS 698489..699187 FT /transl_table=11 FT /locus_tag="CBO0601" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR024425" FT /db_xref="UniProtKB/TrEMBL:A5HZE5" FT /protein_id="CAL82154.1" FT /translation="MKKERVFWGILLILGGVFLIISKLGYFPDVNAFSLLLTVFLVVVI FT VKSFFRINFAGILFPIAFICIIYDKQLGITNITPWTVLIAALLGSIGLSMIFHKRPKWV FT NKKYNCEDYKFEKIDIEDESHVRFKSSFGASIKYINTDNFEKADFNCSFGAMKVYFDNA FT IMTDSNAIVRINASFSGIELYVPKTWNIDDKTNVFLGAISEKNKNDKTTTNTLTLVGDI FT NFAGVEIIYI" FT sig_peptide 698489..698564 FT /locus_tag="CBO0601" FT /note="probabilty 0.713, with cleavage site probability FT 0.476 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(698507..698566,698576..698629,698633..698692, FT 698720..698779) FT /note="4 probable transmembrane helices predicted for FT CBO0601 by TMHMM2.0 at aa 7-26, 30-47, 49-68 and 78-97" FT /inference="protein motif:TMHMM:2.0" FT repeat_region complement(699230..699329) FT /note="intergenic repeat 1" FT repeat_region complement(699351..699380) FT CDS 699789..700676 FT /transl_table=11 FT /locus_tag="CBO0602" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5HZE6" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR010499" FT /db_xref="InterPro:IPR011256" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5HZE6" FT /protein_id="CAL82155.1" FT /translation="MNYSNAISECIEFIEENIKSDLTPEVIANKCGYSVFHFSRIFNIN FT KGITLMEYVKKRRLSLAAIDLFKGGRIIDIALDYGFETHNGFSKAFKKEFGFSPKQYVK FT CMGNYFNEELNIDFGGYIMNPVIIKKSAFKVAGYGIKTNITNSNYTKDIASFWSNYNGE FT NLESKMYKILNPPKHGEVGLCVPANGESGDAVYLLGVIVDNFDNVTNEMITVEVPEATY FT AVFTIPPVDTSNDLDNDDFPEAIKKTWKYIFEEWFKDSEYVFDESKFDFEFYDERCHGR FT KDTVMEIYVPIEKK" FT misc_feature 699819..699953 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 30.0, E-value 5.8e-06" FT /inference="protein motif:Pfam:PF00165" FT misc_feature 699852..699917 FT /note="Predicted helix-turn-helix motif with score FT 1213.000, SD 3.32 at aa 22-43, sequence FT LTPEVIANKCGYSVFHFSRIFN" FT misc_feature 699960..700085 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature 699963..700100 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 26.9, E-value 4.9e-05" FT /inference="protein motif:Pfam:PF00165" FT CDS 701120..702016 FT /transl_table=11 FT /locus_tag="CBO0603" FT /product="putative protease" FT /db_xref="GOA:A5HZE7" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5HZE7" FT /protein_id="CAL82156.1" FT /translation="MMINPFKDDIGDISKKVYVIKKLLGFIVVLISSKIIAQAIVILGL FT ATAGYDFLHGEMPSNDVMMLIKHYGVSINLVITILYCKFIEKRNLESMGIVKKKIAKSY FT FLGTGIAVILLCIIFVLSILSGAVVYYGKNDDINIILILAYLGGFIIQGAMEEIMCRGF FT LMNSLLYKIPTSIAILISSIMFAFPHFFALFQSNIIVAIVGIVNLLLFSTVVSLLMIKY FT NNIWVSCAVHSIWNFILSIIIGINLSGSNSASSVFKFNANENMELLSGGTYGIEAGLIC FT TIVLILFAIVLGRKVKR" FT misc_feature order(701192..701260,701303..701371,701432..701500, FT 701528..701581,701615..701683,701711..701779, FT 701816..701884,701927..701995) FT /note="8 probable transmembrane helices predicted for FT CBO0603 by TMHMM2.0 at aa 30-52, 67-89, 110-132, FT 142-159,171-193, 203-225, 238-260 and 275-297" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 701546..701848 FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 57.3, E-value 3.5e-14" FT /inference="protein motif:Pfam:PF02517" FT CDS 702029..702421 FT /transl_table=11 FT /locus_tag="CBO0604" FT /product="putative transcriptional regulator" FT /db_xref="GOA:A5HZE8" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5HZE8" FT /protein_id="CAL82157.1" FT /translation="MAFSNKLYSLRKQKGLSQDELGSKLNVSRQTISKWELGETTPELE FT KLIALGDFFEISLDELVMDVKAKESTKTEPLVMNRFETIIDSIDRENVKMYTKKISKIV FT LIIMVVILAIDLISMIVYFILKGFPI" FT misc_feature 702047..702211 FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 67.6, E-value 2.7e-17" FT /inference="protein motif:Pfam:PF01381" FT misc_feature 702074..702139 FT /note="Predicted helix-turn-helix motif with score FT 1972.000, SD 5.90 at aa 16-37, sequence FT LSQDELGSKLNVSRQTISKWEL" FT misc_feature 702335..702403 FT /note="1 probable transmembrane helix predicted for CBO0604 FT by TMHMM2.0 at aa 103-125" FT /inference="protein motif:TMHMM:2.0" FT CDS 702884..704023 FT /transl_table=11 FT /locus_tag="CBO0605" FT /product="putative lipoprotein" FT /note="No significant database matches. Also similar to FT CBO0606 (69.816 38dentity in 381 aa overlap.)" FT /db_xref="GOA:A5HZE9" FT /db_xref="InterPro:IPR011081" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5HZE9" FT /protein_id="CAL82158.1" FT /translation="MRKKAIISLLLILITMLGISGCSKKEKTSVLTNNVKQQEAMKENE FT VKKFIKNGTNFLNAGKYDDAKSSFEKAILMEKSNKGSYIEIKNKCMEKNRLDDAYYFIK FT LAVNNNVDTENMKKLLSDIKSKFEVTKLYENVYQNHEYQLPDKIKAKINNEDKEVGVVW FT NNNNVDTSEVGTIKYQGKIEQYDKIVELNLKVMEFQKENKNQEVKNVKKIKNSQEENKN FT KEVKNSQEENKNQKVKEVKDGKQIGFINEIYEQNGKRYLKFDDVEFFHNKDADDRTAEK FT EAIKDGKKDLLLDGRMTDDYYFRNKDKSLEDYEISPNVEIDICRYHIDSNDVTSKLQQI FT RISYEKFKALDNVYGQNKALFYIYVENNVIVKIQEQYRP" FT sig_peptide 702884..702956 FT /locus_tag="CBO0605" FT /note="probabilty 0.999, with cleavage site probability FT 0.568 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 702917..702949 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 704220..705326 FT /transl_table=11 FT /locus_tag="CBO0606" FT /product="putative lipoprotein" FT /note="No significant database matches. Also similar to FT CBO0605 (69.816 38dentity in 381 aa overlap.)" FT /db_xref="GOA:A5HZF0" FT /db_xref="InterPro:IPR011081" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5HZF0" FT /protein_id="CAL82159.1" FT /translation="MRKKAIVSLLLILIVMLSASGCGKKQKTSVLTNDVKQQEAMKENE FT IKKFIKDGTNFLNSGKYDDAKSSFEKAISMDKSNKVSYIEIKNKYMEKKRIDDAYYFIK FT LAVSNNVDTENMKKLLDNIKSKFEVTKLDAGVYQSHEYQLPDKIKAKINNEDKEVGVVW FT NNNNVDTSKVGTIKYEGKIEQYDRDAELNLQIIEIEKEKEAKEENNTEKAKNTQEENKN FT EKAKTGKSGKQIGFINEIYEQNGKRYLKCDEVEFFLNDGTNESALKAEAIKDGKEKEWN FT ARRISHQFYIRNKDKSLETYEISPKVDVYVCKYRIDSNATNSADLTKIGYEKFKTLDNI FT YGSADNLYLHYIYVENNVIVRIEEQFIP" FT sig_peptide 704220..704274 FT /locus_tag="CBO0606" FT /note="probabilty 0.999, with cleavage site probability FT 0.351 between residues 19 and 20" FT /inference="protein motif:SignalP:2.0" FT misc_feature 704232..704285 FT /note="1 probable transmembrane helix predicted for CBO0606 FT by TMHMM2.0 at aa 5-22" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 704253..704285 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 705501..706184 FT /transl_table=11 FT /locus_tag="CBO0607" FT /product="two-component response regulator" FT /db_xref="GOA:A5HZF1" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZF1" FT /protein_id="CAL82160.1" FT /translation="MDFKVLVVEDEISINDILVSALRADGYKVKGVFLAKDAKDALDFF FT HPDLVLLDINLPDESGFELCRHINDKCCIPIIMLTARNDIVDKVLGLELGADDYITKPF FT NIKEVLTRVKVAIRRVNKYKEKSDKEFIYINKFVKVNLEGRIVFKDDKEVKLKPQEYEL FT LEFFVKNRNIVFSREILLNKVWGFDYEGEVRTVDVHVRRLRSKLDKENATSIIDTVFGI FT GYVMR" FT misc_feature 705507..705863 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 124.5, E-value 2e-34" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 705951..706178 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 70.6, E-value 3.4e-18" FT /inference="protein motif:Pfam:PF00486" FT CDS 706189..707610 FT /transl_table=11 FT /locus_tag="CBO0608" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5HZF2" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HZF2" FT /protein_id="CAL82161.1" FT /translation="MKIRDKFITGLIFILIVSMIVMNVAITHVLKSNMENSINNFLKQV FT MNSTHEYVKYNLVTNSFKDKKESLVEEGNYIIKHISLNYECKCDIRDINYILIEGNVPE FT EFRSITKKSKKVAMDGKAVVDLKYRYNGVDAILTYPIYIDNEYVGIISIVKNYDSKYRD FT YKNTINIINIIELGTFIVIFIFLFLRTNKITKPITELTDAIKKLGYGDYNISIAEHGKD FT EVAILAREFINMRDKIKEQIETIESEKNKVYKLEKGRKEFFNSVTHELKTPLTAISGYA FT ELLLTGMVKDKDFDKRAIERIYSESDRLHKLVLDLIEVSKGMCVIKEELNYVDMKELII FT QSCSDMNIKANKYSLKIIQNISEGTVKVQQDKIRQVLINIIDNAIKYSYGGNEIYVNSY FT VSDNKYIIEVINNSNPIPDEIFNSIFEPFIKSNNDNKDSRGLGLYLCNEIVKEHDGEIT FT IENGSLIKVKIHLII" FT sig_peptide 706189..706267 FT /locus_tag="CBO0608" FT /note="probabilty 0.977, with cleavage site probability FT 0.380 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(706207..706275,706591..706650,706684..706752) FT /note="3 probable transmembrane helices predicted for FT CBO0608 by TMHMM2.0 at aa 7-29, 135-154 and 166-188" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 706699..706908 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 49.4, E-value 8.4e-12" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 706960..707163 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 58.8, E-value 1.2e-14" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 707290..707604 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 88.5,E-value 1.4e-23" FT /inference="protein motif:Pfam:PF02518" FT CDS 707816..708532 FT /transl_table=11 FT /locus_tag="CBO0609" FT /product="D-alanyl-D-alanine carboxypeptidase" FT /EC_number="3.4.16.4" FT /db_xref="GOA:A5HZF3" FT /db_xref="InterPro:IPR003709" FT /db_xref="InterPro:IPR009045" FT /db_xref="UniProtKB/TrEMBL:A5HZF3" FT /protein_id="CAL82162.1" FT /translation="MKKGFKKSLLFIIIIIICGFCYMLKNTILKLENSSVIGINASLAD FT EDKLVKENGVNVRAERLLVNRENGLNKDYIPEGLSIPNIPFSDRSDDEEKHVAGIIVKP FT LEELINTAKEEGIILLGNSGYRSYRSQKNIYKNRARSQGKELADAYVAKPGFSEHQTGL FT CIDITNKDRYFVQGTKEADWLAKNCYRFGFIIRYPKEKKSITNIEYEPWHIRYVGKEAA FT KYIYDNKITLEEYLGK" FT sig_peptide 707816..707903 FT /locus_tag="CBO0609" FT /note="probabilty 0.894, with cleavage site probability FT 0.375 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature 708095..708520 FT /note="Pfam match to entry PF02557 VanY,D-alanyl-D-alanine FT carboxypeptidase, score 158.7, E-value 1.1e-44" FT /inference="protein motif:Pfam:PF02557" FT CDS 708553..709245 FT /transl_table=11 FT /locus_tag="CBO0610" FT /product="two-component response regulator" FT /db_xref="GOA:A5HZF4" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZF4" FT /protein_id="CAL82163.1" FT /translation="MNNNILVVDDEKEIRDLLEINLINEGYNVFKASCGEEALEILERE FT EVNLMVLDIMMPDMDGLEVCKRAREKYSIPILMLSAKVEDMDRIEGIMTGADDYVCKPF FT NHLELTVRIRALLRRAYFLNTKMQISDNIIRIESMVIDKKQHKVTINDNEIDLTAREFE FT ILYLLANNRGMVFSAEEIFEKVWKERYFQSNNTVMVHMSRLRDKIEQHMEGSKVIHTVW FT GVGYKIEK" FT misc_feature 708559..708915 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 122.9, E-value 6.1e-34" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 709006..709236 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 83.2, E-value 5.5e-22" FT /inference="protein motif:Pfam:PF00486" FT CDS 709235..710356 FT /transl_table=11 FT /locus_tag="CBO0611" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5HZF5" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HZF5" FT /protein_id="CAL82164.1" FT /translation="MKNKRLYKYCLSSLRDILIALILTYTTAYISKKILNYLYVKFDNE FT FAFYFWTLWRNVKFATVGQSLNIIVGVVLFSMFYLIITYRKAKNFVAIIEETEIMANGD FT LDRVIQVNAEGDIKNLAENINNISKQLKDITVAERNAQKTKNDLITNVSHDLRTPLTSI FT MGYLELIDNDQYKDEVALRYYVNIAYEKSKGLNVLIKDLFELTKMRNNTINLEKVDINL FT VELLGQVVAYFEYQFKSANMKSRIKFSNDKLIVNADAGKLVRAFENLLSNAIKYGKDGY FT YVDVVTKLEENMAVIQIINYGQLIPTVDLPYIFDRFYRVEKSRNNKIGGSGLGLAITKN FT IIELHEGTIKAYSNDNKTVFEIKLPIKININSN" FT misc_feature order(709283..709351,709409..709477) FT /note="2 probable transmembrane helices predicted for FT CBO0611 by TMHMM2.0 at aa 17-39 and 59-81" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 709664..709867 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 65.7, E-value 1e-16" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 710003..710335 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 112.6, FT E-value 7.9e-31" FT /inference="protein motif:Pfam:PF02518" FT CDS complement(710516..711655) FT /transl_table=11 FT /locus_tag="CBO0612" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZF6" FT /protein_id="CAL82165.1" FT /translation="MEIVKGMGLLLFTLGLFSLFSFKAPKGSKAMSGLANAAVATFLVE FT AIHKYISGDFLNFTFLGKVGEVSGSMGGVAAAILVPISMGANPLYAVVAGVAIGGYGIL FT PGFIAGYIIGLIAPIFDKKLPEGLNTIVGALLIAPLARFIAMGIDPVVNATLVNIGQMI FT SLAAQQSPLVMGFLLGGIMKVVCTSPLSSMAVTAMLGLQGLAMGIAGIACVGGSFTNGI FT IFKRLKLGNKSNIIAVMLEPLTQAPIVTKNPIPIYGSNILGGGLAGLSAAYFNIINNAP FT GTASPIPGLLAPFGFNDPKKVLIAVTFAVIGGSIGGLVGSVVFKGFAKKDYNSDEILVN FT EINKSNNDINNIAGETATEIATDTADTNVDILNAKGNTF" FT misc_feature complement(order(710684..710752,710825..710893, FT 710984..711052,711080..711148,711185..711253, FT 711296..711364,711377..711445,711584..711637)) FT /note="8 probable transmembrane helices predicted for FT CBO0612 by TMHMM2.0 at aa 7-24, 71-93, 98-120, FT 135-157,170-192, 202-224, 255-277 and 302-324" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(711562..711655) FT /locus_tag="CBO0612" FT /note="probabilty 0.988, with cleavage site probability FT 0.301 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS complement(711798..712610) FT /transl_table=11 FT /locus_tag="CBO0613" FT /product="two-component response regulator" FT /db_xref="GOA:A5HZF7" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR013972" FT /db_xref="UniProtKB/TrEMBL:A5HZF7" FT /protein_id="CAL82166.1" FT /translation="MRVLIIDDDINVHKILNKIINHECLGEVIKNTPLNGEDGGFLIEK FT EKPDIVIVDLLMPGKDGLTLVREYKSKYPHIQYIMLSQVSSKDMIAKAYENGIEFYISK FT PINAVEVKSILKKVINSGIMKKKLGNIDFILKKEDEDNYTSKIKSIMNKLGILGESGCE FT DIIKSIEFIIENNSKDTYTLKELFKEISDKPKSIEQRIRRTAFVALNNIANLGLEDYMN FT DIFVEFSNSIFSFEEVKKEMDYIRGKSSEKGSVNVKKFLQGITYCINK" FT misc_feature complement(712242..712610) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 71.6, E-value 1.7e-18" FT /inference="protein motif:Pfam:PF00072" FT CDS complement(712607..713905) FT /transl_table=11 FT /locus_tag="CBO0614" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5HZF8" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="UniProtKB/TrEMBL:A5HZF8" FT /protein_id="CAL82167.1" FT /translation="MKIKSDLNQLIFIGFLVMFSSQIYIKLFVNHFNISFGIIILIILL FT YMIEMDNKIMVAITSSCLVYIIRILVYFLENNEMNSALKLGIQNHFPEFIFYLVYITIY FT FIIINIKNKNLNSLLFKLIICDFFANFTEMSIRHTIYLENFSLNIIIGLLFVAFLRSTL FT IWVMINLMIRYNTTLLKKEHTERYIKLLASNSTLKSEVYLMEKSMDNIEKVMGKSYKLY FT MDVSQKDLDETLKTKTMEITKDIHEIKKEFNLIVRGVNELTNTKELKDSMNYYEILDIL FT KHMINIEIKNTKIIFKIRKGENFNTIYHYYLISIFRNIIMNSIDALENINNGLVCLNHA FT YTRIDNISGHCFEIIDNGQGIDKDDKKYVFNPGFSTKIDFDTGDVNRGLGLSIVKDIVE FT TKLNGIVKLTSIKGKGTKFMIFIPKDVLEGERI" FT misc_feature complement(712631..712987) FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 60.9,E-value 2.8e-15" FT /inference="protein motif:Pfam:PF02518" FT misc_feature complement(order(713408..713476,713573..713626, FT 713684..713743,713762..713821,713831..713887)) FT /note="5 probable transmembrane helices predicted for FT CBO0614 by TMHMM2.0 at aa 7-25, 29-48, 55-74, 94-111 and FT 144-166" FT /inference="protein motif:TMHMM:2.0" FT CDS 714300..715460 FT /transl_table=11 FT /locus_tag="CBO0615" FT /product="probable cell cycle protein" FT /db_xref="GOA:A5HZF9" FT /db_xref="InterPro:IPR001182" FT /db_xref="InterPro:IPR011923" FT /db_xref="InterPro:IPR018365" FT /db_xref="UniProtKB/TrEMBL:A5HZF9" FT /protein_id="CAL82168.1" FT /translation="MIRRKNVNLNKSFNLKRHIKYFDVFLFIVIILISILGIVMISSAT FT SNFENSRKYIITQILSLVIGLVFMFITIYIDYRNIGRAYKIIYIFNFLLLAGVILLGTG FT KDQWGAQRWIRIGGIGIQPSEIAKIGFIITFAKFLELIKDDLNKIKYLLAAFCYIGVPI FT ILVMIQPDLGTALSFVFISIAMIYICGIDYKYILGGFLACIVIIPIAWQYVLKAYQKNR FT ILIFINPDSDPMGGGYHVLQSKIAVGSGEFFGTGLFKGSHAQNFLPEKHTDFIFALIGE FT ELGFIGSIIVVLLLLIIVLRCISIAKSAKDNLGCYICVGVASMIIFQTFINIGMCIGIM FT PVTGIPLPFISYGGSSLITNFVAMGLVLNVGLRHKPINFFKGSINN" FT sig_peptide 714300..714426 FT /locus_tag="CBO0615" FT /note="probabilty 1.000, with cleavage site probability FT 0.639 between residues 43 and 44" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(714360..714428,714456..714524,714558..714611, FT 714639..714707,714744..714803,714813..714872, FT 714885..714944,715146..715214,715233..715301, FT 715344..715412) FT /note="10 probable transmembrane helices predicted for FT CBO0615 by TMHMM2.0 at aa 21-43, 53-75, 87-104, FT 114-136,149-168, 172-191, 196-215, 283-305, 312-334 and FT 349-371" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 714366..715427 FT /note="Pfam match to entry PF01098 FTSW_RODA_SPOVE, Cell FT cycle protein, score 371.3, E-value 1.1e-108" FT /inference="protein motif:Pfam:PF01098" FT misc_feature 715293..715367 FT /note="PS00428 Cell cycle proteins ftsW / rodA / spoVE FT signature." FT /inference="protein motif:ProSite:PS00428" FT repeat_region 715498..715527 FT repeat_region 715551..715733 FT /note="intergenic repeat 2" FT CDS complement(715769..716953) FT /transl_table=11 FT /locus_tag="CBO0616" FT /product="cyclopropane-fatty-acyl-phospholipid synthase" FT /EC_number="2.1.1.79" FT /db_xref="GOA:A5HZG0" FT /db_xref="InterPro:IPR003333" FT /db_xref="UniProtKB/TrEMBL:A5HZG0" FT /protein_id="CAL82169.1" FT /translation="MAMEKLFLKKFLKSIFSDTFEVKFWDGTTEKFGEGDIKFRILIND FT HLSKSDILKDPFLTFGEAYMNKVIDFEGNVQEVIESVYRNKDSFLHKACLFEKLYKIVP FT HSIKNSKKDIHHHYDLGNDFYKLWLDKTMNYSCSYFKSKDDSLYQAQLNKVDYILKKLN FT LHPGQKLLDIGCGWGDLIITAAKKYGVKSLGITLSNEQFNRVNERIKENHLENQVEVRV FT LDYRELLKTGEKFHRVVSVGMIEHVGRKNIPVYMNAVSDLLEENGVCLLHCITAQQECE FT GNQWIKKYIFPGGYIPSIRELAYNMAENDLHLIDLESLRLHYCKTLECWAENFENSLDE FT VKKLGFDDKFIRMWRLYLNSCAASFHYGVIDLHQFLLTKGLNNEIPMTRDFLYK" FT misc_feature complement(715817..716302) FT /note="Pfam match to entry PF02353 FT CMAS,Cyclopropane-fatty-acyl-phospholipid synthase, score FT 229.9, E-value 3.8e-66" FT /inference="protein motif:Pfam:PF02353" FT CDS 717275..718306 FT /transl_table=11 FT /locus_tag="CBO0617" FT /product="putative arsenical resistance operon repressor" FT /note="The C-terminal region of this CDS is similar to FT arsenical resistance genes such as Staphylococcus aureus FT arsenical resistance operon repressor ArsR SWALL:ARSR_STAAU FT (SWALL:P30338) (104 aa) fasta scores: E(): 0.0047, 38.27 FT 38d in 81 aa, and its N-terminal region is similar to FT several including Plasmodium yoelii yoelii putative bir1 FT protein py02660 SWALL:EAA22137 (EMBL:AABL01000733) (346 aa) FT fasta scores: E(): 1.2,23.21 38d in 224 aa, and Bacillus FT subtilis RNA polymerase sigma-G factor SigG or SpoIIIG or FT bsu15330 SWALL:RPSG_BACSU (SWALL:P19940) (260 aa) fasta FT scores: E(): 9.2, 25 38d in 168 aa" FT /db_xref="GOA:A5HZG1" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZG1" FT /protein_id="CAL82170.1" FT /translation="MKIEILDKLDPICEIFGLIYISHDYEIFIDALKKELNNNGVNGEL FT FLKKNFKIIDKYIKTFDKYKVINENELMFFDEDDESIFMLIAFVLINNKELIYSLDNIT FT DDQFKSIILDVYNEISEEERTIDSISTLNNTIEFLKELDLKENTKWKLMIILNEPKKYY FT KSLIKIIENNKIAYNQACKAIEKPLSKLISNYIKYVNSDKCEVLNNIIKNNDSNIIIIP FT TLTFGTSLFEFKNTYFMGLLYEIICKEYIYSMGNKGELVLKLKALSDKSKLEIISLLKA FT GPKYSLEIAEALKLTPATVSYHMGSLLECSMVVVEKKQGKVYYHLNKIGLKNFIDELNN FT TLL" FT misc_feature 718064..718297 FT /note="Pfam match to entry PF01022 HTH_5, Bacterial FT regulatory protein, arsR family, score 63.3, E-value FT 5.3e-16" FT /inference="protein motif:Pfam:PF01022" FT misc_feature 718124..718189 FT /note="Predicted helix-turn-helix motif with score FT 1165.000, SD 3.15 at aa 284-305, sequence FT KYSLEIAEALKLTPATVSYHMG" FT CDS 718476..720155 FT /transl_table=11 FT /locus_tag="CBO0618" FT /product="ABC transporter, ATP-binding/permease protein" FT /db_xref="GOA:A5HZG2" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:A5HZG2" FT /protein_id="CAL82171.1" FT /translation="MGECIKRNKLLLILTIIFSIISSAAMVGLSLFIQTTIDYVTIGNM FT DGFKRILIYSVGYGILIGLLYFIYDILSKMFIRNLLKMLRNKVFFGILRRNYKDFNSKN FT TADYISVLTNDMKLIEENYVVPLLLILQYSVMFGVTVILLLYLSPLVTLGIFISMLLIF FT IVPSIFGKTLENKQLELSNRLSFFTSKLKDIFLGYDVIRSYNLRDNTTKEFQEENNNLA FT NAKFTADKIFVINESLSQILGLGTQFVAIFLSAYLVIKGELTMGMLIAIVQLSATFVQP FT VIMIMSNVPKLNSVKAIIKRIDDFSNYEDTDFVGKDKPYFNSNLEISNLYFNYGNEKPA FT IDNISLRIDRNKKYAIVGGSGCGKSTLVKLMLGYYSDFNGDIKFDGNSIKNLDIEQLNK FT MISIIHQNVYMFDKTIKDNICLYKEFSKEQINNVLNLSGVNKFIEETTNGLNYLVGENG FT SNLSGGQRQRIAIARALIQQTPILVLDEGTSAIDMQTAYDIESKLLSIENLTLITITHK FT MSEELLSLYDEIIYMENGQILERGNLRELLDKKDKFFRFYTV" FT sig_peptide 718476..718590 FT /locus_tag="CBO0618" FT /note="probabilty 0.968, with cleavage site probability FT 0.241 between residues 39 and 40" FT /inference="protein motif:SignalP:2.0" FT misc_feature 718509..719321 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 87.5, E-value FT 2.9e-23" FT /inference="protein motif:Pfam:PF00664" FT misc_feature order(718512..718580,718623..718691,718842..718910, FT 718923..718982,719184..719252) FT /note="5 probable transmembrane helices predicted for FT CBO0618 by TMHMM2.0 at aa 13-35, 50-72, 123-145, 150-169 FT and 237-259" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 719526..720080 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 169.9, E-value 4.4e-48" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 719547..719570 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 719856..719900 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS complement(720578..721204) FT /transl_table=11 FT /gene="cat" FT /locus_tag="CBO0619" FT /product="chloramphenicol acetyltransferase" FT /EC_number="2.3.1.28" FT /db_xref="GOA:A5HZG3" FT /db_xref="InterPro:IPR001707" FT /db_xref="InterPro:IPR023213" FT /db_xref="UniProtKB/TrEMBL:A5HZG3" FT /protein_id="CAL82172.1" FT /translation="MKYIDFNDFERKEHYKFFESVDNPQFNICMNIDVTNFLRFVKSNK FT ISFYYSMIYASTHVMNEIKDFRYKIRDGKIILHDSLQPSFTDMESNKNLFKIVTLPLKK FT DIIEFSNSAKEVSKNQKEYFPTIAEDQDKLIYFSCIPWISFTSISNEIVMNKEDSIPRI FT SFGKYFKQDNKVLLPYSVQVNHMLLDGIHVGKYIEKLQNFIDKFQ" FT misc_feature complement(720602..721204) FT /note="Pfam match to entry PF00302 CAT, Chloramphenicol FT acetyltransferase, score 53.3, E-value 2.7e-17" FT /inference="protein motif:Pfam:PF00302" FT CDS 721369..721986 FT /transl_table=11 FT /locus_tag="CBO0620" FT /product="TetR-family transcriptional regulator" FT /db_xref="GOA:A5HZG4" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023773" FT /db_xref="UniProtKB/TrEMBL:A5HZG4" FT /protein_id="CAL82173.1" FT /translation="MSPKVSENYKYEKRKELLNSARNVFVKNGYLRTSMQDIMDEAKIS FT RGALYSYFKNIDDVFLEVLKLDDCEDIKSLDFRGNESIWNQLIVWIEDILDDICEIDKT FT LTFAKTEFFIAVNYKADKDKFTYIKDRHNRLEKKIKNIIEDGIERKEFYPQMCINSIAI FT YFISFFDGLMLNRFNLDMDRDKLEKQVNIFKYSLEKILGLKK" FT misc_feature 721417..721557 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 61.5, E-value FT 1.9e-15" FT /inference="protein motif:Pfam:PF00440" FT misc_feature 721465..721530 FT /note="Predicted helix-turn-helix motif with score FT 1575.000, SD 4.55 at aa 33-54, sequence FT TSMQDIMDEAKISRGALYSYFK" FT CDS 722089..722559 FT /transl_table=11 FT /locus_tag="CBO0621" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5HZG5" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HZG5" FT /protein_id="CAL82174.1" FT /translation="MNFRKANANDINELALLFKNLQDMHSKNVTNIFNQNIDECVVNDY FT INNVILNENYNFYIVEDKKKIIGAIEVITIIEKDNPVLKNREYALIDKLVVDNNYRGYG FT IGNRLIEYAEKDLKSRGIKEIEIYVWEFNRGALNLYEKKGYKTICRRMTKSI" FT misc_feature 722260..722526 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 73.2, FT E-value 5.9e-19" FT /inference="protein motif:Pfam:PF00583" FT CDS complement(722626..722955) FT /transl_table=11 FT /gene="csaA" FT /locus_tag="CBO0622" FT /product="putative chaperonin involved in protein FT secretion" FT /db_xref="GOA:A5HZG6" FT /db_xref="InterPro:IPR002547" FT /db_xref="InterPro:IPR008231" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:A5HZG6" FT /protein_id="CAL82175.1" FT /translation="MVNFEDFMKLDIRVGEIIKVESFEKAKKPAYKLLVDFGTEIGIKK FT SSAQITECYKKEELIGKQVLGVVNFPPRQIADFMSEVLVLGIYTTQGVVLIQPQQPVKK FT GDKLG" FT misc_feature complement(722635..722922) FT /note="Pfam match to entry PF01588 tRNA_bind, Putative tRNA FT binding domain, score 83.6, E-value 4.2e-22" FT /inference="protein motif:Pfam:PF01588" FT CDS complement(723163..723888) FT /transl_table=11 FT /locus_tag="CBO0623" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5HZG7" FT /db_xref="InterPro:IPR003313" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:A5HZG7" FT /protein_id="CAL82176.1" FT /translation="MNSIRCERRIYDYKLNTHSHSYAQLILPIHGVLYIETNYKKLPLE FT DEHLFFLPPDCKHTFGADKSNEFLVLDIPTNILNKYDMEKMVGGKEFLFDNKWKAIRYL FT LLNEADNKKSSNSINDLFLYCYHFIADESIPDSIKYINEHFTEDIDLKKLAAIEHYNIS FT YYSEWFKNKMKISPVEYIQNLRVKKAKEFLLNTDLTILQISQMVGYEHNSSLTRVFRHL FT EKTSPTEFRKKSKNKLKTS" FT misc_feature complement(723193..723327) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 39.3, E-value 8.9e-09" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(723208..723336) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature complement(723343..723483) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 19.3, E-value 0.0093" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(723379..723444) FT /note="Predicted helix-turn-helix motif with score FT 1085.000, SD 2.88 at aa 149-170, sequence FT IDLKKLAAIEHYNISYYSEWFK" FT CDS complement(724185..724736) FT /transl_table=11 FT /locus_tag="CBO0624" FT /product="putative DNA-binding protein" FT /db_xref="GOA:A5HZG8" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR013096" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:A5HZG8" FT /protein_id="CAL82177.1" FT /translation="MNINSIIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKGDTN FT PTINTLWKIANGLKVPYTLLLEQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRN FT FELFQIELDEGCSYRSVGHSKKSEEYIMVLEGELTLKVNNETYKLSPNDSISFSPSNQH FT IYSNNGNGTLKATITNFYPV" FT misc_feature complement(724542..724706) FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 63.4, E-value 4.9e-16" FT /inference="protein motif:Pfam:PF01381" FT misc_feature complement(724614..724679) FT /note="Predicted helix-turn-helix motif with score FT 1614.000, SD 4.68 at aa 20-41, sequence FT LSLGQLAELSNISKVMLSQIEK" FT CDS 724993..725583 FT /transl_table=11 FT /locus_tag="CBO0625" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZG9" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006675" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5HZG9" FT /protein_id="CAL82178.1" FT /translation="MITREEAWNLLTKYNKEAFHIQHALTVEGTMKYFAKKLGYGEEAE FT FWAMVGLLHDLDFEMYPEQHCIKTQEIMREYGLDERLIRAAASHGYGLCEGELPKPEHE FT MEKVLFAVDELTGLIGAAARMRPSKSVMDMEVSSLKKKFKDKKFAAGCSRDVIKQGAET FT LGWELNKLFEETILAMRSCEEHINNEMEAYTKN" FT CDS 725711..726727 FT /transl_table=11 FT /locus_tag="CBO0626" FT /product="putative ABC transporter with DNA-binding domain" FT /db_xref="GOA:A5HZH0" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR007492" FT /db_xref="InterPro:IPR012046" FT /db_xref="UniProtKB/TrEMBL:A5HZH0" FT /protein_id="CAL82179.1" FT /translation="MLKIKGLYKEQKNNVIKDIDIDINKGSSISIECSNEISDLLIDLI FT LGRDMPAKGEICLENIKSLDYIKTNISDIGVVLREESFYDRMTIEEYMKFFSSLLSSKV FT DYKEIMLKLALLDIGNKKIRDLNYSQKRRLSFARERLKQPQFLIFQEPILNMDRDGAKV FT IIENIEDLKSNGTAILITSVVFKDTLMLSEKAYRLNDEGLVELDNSLEESKNEREEALD FT KKPVYKIEKIPAKLDERILLFDPIEIDYIESQQGVNNLNIRGDKFPCTISLTDLEERLK FT YFVFFRCHRSYLVNLQRVKEVITWTRNSYTLSLDDKVKSSIPLSKRRLEELKDILNL" FT misc_feature 726401..726721 FT /note="Pfam match to entry PF04397 LytTR, LytTr DNA-binding FT domain, score 78.0, E-value 2e-20" FT /inference="protein motif:Pfam:PF04397" FT CDS 727110..727826 FT /transl_table=11 FT /locus_tag="CBO0627" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZH1" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5HZH1" FT /protein_id="CAL82180.1" FT /translation="MEKIISMKNVTKDFKENRALKSLTFSIEEGEIFGFLGPSGAGKTT FT TIKLLTSQLIPTSGEVKVFGKDVYLNKKEIVKNIGILSDTSGMYDRLSVLDNLMLFADI FT NAISKKNVLEILDKIGMKDTIKKEVKKLSKGMKERLMIARAVLHKPKLLFLDEPTSSLD FT PGTTLEIHKLLRTLNGEGTTIFLTTHNMFEADKLCDRVAFLNDGEIVDMGSPQVLKLKY FT INDDIKVMQNFYLVII" FT misc_feature 727197..727730 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 193.8, E-value 2.9e-55" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 727218..727241 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 727823..727966 FT /transl_table=11 FT /locus_tag="CBO0628" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZH2" FT /protein_id="CAL82181.1" FT /translation="MNIMIARLFKGETFGIESTRSIAIILAWIIIALIAFAFTYNRRGL FT DK" FT sig_peptide 727823..727931 FT /locus_tag="CBO0628" FT /note="probabilty 0.701, with cleavage site probability FT 0.701 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature 727883..727942 FT /note="1 probable transmembrane helix predicted for CBO0628 FT by TMHMM2.0 at aa 21-40" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(728044..729267) FT /transl_table=11 FT /locus_tag="CBO0629" FT /product="N-carbamoyl-L-amino acid hydrolase" FT /EC_number="3.5.1.87" FT /db_xref="GOA:A5HZH3" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010158" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:A5HZH3" FT /protein_id="CAL82182.1" FT /translation="MLSCNKKRLEDKIITFSKFGATENGGITRLSLSKPAIQARVEFSK FT RMNELGATIATDDMGNMYATFKGSEENLPHIAMGSHCDSVVQGGNYDGILGVLTAMEVA FT ETIVTEKISHRHPITVMIWTNEEGARFDPAMMSSGVITGKFDKSEMLDSKDKKGISFGE FT ALDASGYKGEEKNRINPKDYMALLELHIEQGPVLESSKIDIGVVEGVVGMVNYEFEFIG FT QAGHAGTVPQKMRKDALLAASEAIQYLHKELDKLHDNLVYTTGRIICFPNIHTIIPDNV FT KFTLDARHQDAKVIRQVVKIIENIPKELANCKVTYRKLWSRKTVSFNNQLINFVEKNAN FT LYGYYNMRMYSGPGHDAQFAADMLPTTMIFVPSIGGHSHCEIEKTPLDNCLKGANVLLQ FT TILDIDEK" FT misc_feature complement(728056..729231) FT /note="Pfam match to entry PF01546 Peptidase_M20,Peptidase FT family M20/M25/M40, score 61.4, E-value 2e-15" FT /inference="protein motif:Pfam:PF01546" FT CDS 730100..731995 FT /transl_table=11 FT /locus_tag="CBO0630" FT /product="DNA mismatch repair protein" FT /db_xref="GOA:A5HZH4" FT /db_xref="InterPro:IPR000432" FT /db_xref="InterPro:IPR005747" FT /db_xref="InterPro:IPR007696" FT /db_xref="UniProtKB/TrEMBL:A5HZH4" FT /protein_id="CAL82183.1" FT /translation="MNKETLEKLHYYELKEMIKEYCVSGLGKRLIDKLEPSSNIKIVNQ FT RLDETSEGRRLLDVSYNIPLEGIFNVLPLIEKVEKGASLEPTDLTMMSNFLRGCRKVKL FT FIKDKEGYAPTLSAYGENICDLSYIEEEINRSIRGSVVDSNASKELKKIRRNIDICESR FT IKEKLDKFLRNSANKEYIQEFFVSQRDGKHTIAIKVAHKNKVQGTIVETSSKGTTVFME FT PNVISKHTSELAVLKAEESVEEYKILATLTEMLFERIKDLKMNVDVISEYDMIWAKAKY FT SKVINGIKPKLNDYGYIKIIKGKYPLIKDSIPLDFEIGKDYRGLIITGPNAGGKTVVLK FT TIGLLTLAIQSGFHIEAEEGTEFSVFKKLFVDIGDNQSVENALSTFSSHVKNLAEIIRE FT STKSTLLLFDEIGSGTEPNEGSALAIAILEELYHKGSITISTTHYGEIKNFSKEHPDFE FT NAAMEFEKETLEPLYKLSIGKVGDSNALYISKKMGLYDSIIDRARKYMDTKSYNYNLIE FT DSKIIKNKELQAEEDFYEYSVGDKVTLLENNESAIVYKERDRLNNVTILYNKEFIDVNY FT KRIKLELKASELYPEGYDLNQLFISYKERKLEKDIKRGSKKALKRIKKETLKRSK" FT misc_feature 730958..731656 FT /note="Pfam match to entry PF00488 MutS_V, MutS domain FT V,score 4.2, E-value 2.4e-14" FT /inference="protein motif:Pfam:PF00488" FT misc_feature 731084..731107 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 732223..732534 FT /transl_table=11 FT /locus_tag="CBO0631" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZH5" FT /protein_id="CAL82184.1" FT /translation="MTKHMIEKANKEASNNEFGNALSFIDQGLKNDPNNKELISLKNKC FT EKQNDAMQAAQDKANAEAEAEKAKAEAEKYKPKRITKSDWIVSSPPIRMFTKIIIIIV" FT CDS 732592..732942 FT /transl_table=11 FT /locus_tag="CBO0632" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZH6" FT /protein_id="CAL82185.1" FT /translation="MVKFKFEYTEIDGLLYPNIEIDGKALLNNLGKYGLLRLNYLHEQK FT PGMYRELLLTDKLAEHCTTIDWIAFEMAERIRADYLKLHPMPKEDTMERIHISIQAQMV FT SDEFVVAKLICI" FT CDS complement(733029..733502) FT /transl_table=11 FT /locus_tag="CBO0633" FT /product="putative 5-Nitroimidazole resistance protein" FT /db_xref="GOA:A5HZH7" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="InterPro:IPR024747" FT /db_xref="UniProtKB/TrEMBL:A5HZH7" FT /protein_id="CAL82186.1" FT /translation="MQYRMKTHPLSEEQLNDLLSRVQTGSLATLNADGTPYNTPVHFVH FT INECIYVHGLPKGQKIDNIIRDSKVGFTMYDMQELLLDANGKPCDTNTKYESAIATGSA FT ALVEDIGEKKMVLQKIVEKYTPHLTDASLPENMVRGTAVIRISIAELTGKYYE" FT CDS complement(733525..733860) FT /transl_table=11 FT /locus_tag="CBO0634" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR007401" FT /db_xref="UniProtKB/TrEMBL:A5HZH8" FT /protein_id="CAL82187.1" FT /translation="MGLVFLGIGLLGVVLPILPTTPFLLITTYCFAKGSSRFHHWFCNT FT HIYQKYIENYIKERAMTLKAKLSILIFASTFVMIAFATIRILLARCFLIAVMLFHWWYF FT FFRIKTK" FT misc_feature complement(733534..733758) FT /note="Pfam match to entry PF04304 DUF454, Protein of FT unknown function (DUF454), score 62.5, E-value 9.2e-16" FT /inference="protein motif:Pfam:PF04304" FT misc_feature complement(order(733546..733605,733615..733683, FT 733783..733851)) FT /note="3 probable transmembrane helices predicted for FT CBO0634 by TMHMM2.0 at aa 4-26, 60-82 and 86-105" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(733908..734192) FT /transl_table=11 FT /locus_tag="CBO0636" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZH9" FT /protein_id="CAL82188.1" FT /translation="MNWYGIAIGIGSFFIIGVLHPVVIKVEYYFGKKVWPAFLLLGIDC FT NVVSLAVGHIVISVLLAVLVFPLFWSIGELRQQKERVKKGWFPKNPKKK" FT misc_feature complement(order(733977..734045,734121..734189)) FT /note="2 probable transmembrane helices predicted for FT CBO0636 by TMHMM2.0 at aa 2-24 and 50-72" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(734189..734353) FT /transl_table=11 FT /locus_tag="CBO0637" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZI0" FT /protein_id="CAL82189.1" FT /translation="MPIPSLIKGTVLLYNCLLSIKKFLNTITKCFLIKSVEKMYDFIIR FT DRVEAELNR" FT CDS 734563..735042 FT /transl_table=11 FT /locus_tag="CBO0638" FT /product="putative 5-Nitroimidazole resistance protein" FT /db_xref="GOA:A5HZI1" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="InterPro:IPR024747" FT /db_xref="UniProtKB/TrEMBL:A5HZI1" FT /protein_id="CAL82190.1" FT /translation="MRRKEREIKDINEIFQVIENCSAVHVGMVDEGKPYVVALNFGYDR FT EGDDLILYLHSAMEGRKMDILRKNPAVYFQMDCVNELIKTTWENPCAYSWRFDSVMGSG FT NVEFIEDETGKSHALTRILQHLDKTDEQYNFPSQALSRTCVFRVCSNDFTGKRRG" FT CDS complement(735266..735577) FT /transl_table=11 FT /locus_tag="CBO0639" FT /product="putative DNA repair protein" FT /db_xref="GOA:A5HZI2" FT /db_xref="InterPro:IPR003265" FT /db_xref="InterPro:IPR011257" FT /db_xref="UniProtKB/TrEMBL:A5HZI2" FT /protein_id="CAL82191.1" FT /translation="MYFEYGREETEFLKSRDELLGAAIDRIEHIYRAVDNDLFSSVVHH FT NIGQQISTRAQATIWKRLEDRLKIVDADAICSLELEELQKLGMTFRKAENDLRECFLP" FT misc_feature complement(735269..735280) FT /note="PS00294 Prenyl group binding site (CAAX box)." FT /inference="protein motif:ProSite:PS00294" FT misc_feature complement(735293..735451) FT /note="Pfam match to entry PF00730 HhH-GPD, HhH-GPD FT superfamily base excision DNA repair protein, score FT 29.8,E-value 7.1e-08" FT /inference="protein motif:Pfam:PF00730" FT CDS complement(735716..737125) FT /transl_table=11 FT /locus_tag="CBO0640" FT /product="GntR-family transcriptional regulator" FT /db_xref="GOA:A5HZI3" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5HZI3" FT /protein_id="CAL82192.1" FT /translation="MLYIDRGSNIPIYQQIYEQMKRDIISGNLPVESRVISTRVLASEL FT QVGRNSVENAYDQLRLEGYITSIPGSGYIVNKLEFDLIQKSPKEQRQSKLLTEHLAVLP FT DKIKYSFQYGELDETNFPKKLWRTYVANVLDEPLAHSMHSYGDGKGDPQLRQQIKQYLY FT HSRGVQCETEQIILCSGTQSALETIIRIFSGKKAVAMEEPCYDGARAVFQSNGFKILPV FT PVREDGIDLQKLSSQSIPMVYLSPSHQFPTGAVMPIHNRMEVLNLAHQRDMMIIEDDYD FT SEFRYKGRPIPSLQSIDQAGRVIYVGTFSKALSPGLRISYLVLPTWLLAAYQEKYRGYQ FT CTIPLIEQKVLLHFMQDGHWEKHIRRVCLSQKRKHDTLIVAIQQIIGDRVRIYGHHAGL FT HILLEFVDEQQEDTLVQKAMRYGVQVRPVSPFWLEKGRYSGNAVVLGYGKIKEKDIVPA FT VELLNKAWFEE" FT misc_feature complement(736901..737092) FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 41.9, E-value FT 1.5e-09" FT /inference="protein motif:Pfam:PF00392" FT misc_feature complement(736949..737023) FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT /inference="protein motif:ProSite:PS00043" FT CDS 737318..737626 FT /transl_table=11 FT /locus_tag="CBO0641" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007138" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:A5HZI4" FT /protein_id="CAL82193.1" FT /translation="MFTEKFLEVLKHELVKIDGFIHSEGFSSLVNERKILSLSVWEDDD FT AVSKWRNIVEHRMAQQQGRDSIFESYTITVVSSLRSYTDKERAEAPNYSNIFSQQAR" FT CDS 737681..737941 FT /transl_table=11 FT /locus_tag="CBO0642" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="GOA:A5HZI5" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="InterPro:IPR024747" FT /db_xref="UniProtKB/TrEMBL:A5HZI5" FT /protein_id="CAL82194.1" FT /translation="MGLLSFRLFGVMFLRMRRASKMRRRDRAITEFHDIVKVMKACKVC FT HVAFHDDEYPYVAPMTFGLEVKDNEEVSIYFFLSVIYIYTT" FT misc_feature 737804..737821 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT /inference="protein motif:ProSite:PS00190" FT CDS 738200..739477 FT /transl_table=11 FT /gene="rhlE" FT /locus_tag="CBO0643" FT /product="putative ATP-dependent RNA helicase rhle" FT /db_xref="GOA:A5HZI6" FT /db_xref="InterPro:IPR000629" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014014" FT /db_xref="UniProtKB/TrEMBL:A5HZI6" FT /protein_id="CAL82195.1" FT /translation="MLFENLEIIKPIQKALKEEGYKKTTPIQEKSIPYILDGRDLVGCA FT QTGTGKTAAFAVPVLQNLSKDKKVNKNPRTIRALVLAPTRELAIQIGESFECYGKYINL FT KSAVIFGGVSQNPQTKALREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLD FT MGMIHDVKKIISKLPKARQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQ FT EVYHVRKKQKRALLKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQ FT NARQRALNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDIPETYVHRIGRTGRAG FT AKGVAISFCDIEETKSLKAIEKLINKEIPVVEDHPYKIRHINEGEIKKENTKDNFNEKS FT STKRQGGNWRYSNNRRKNNSTKQIKK" FT misc_feature 738239..738868 FT /note="Pfam match to entry PF00270 DEAD, DEAD/DEAH box FT helicase, score 285.9, E-value 5.4e-83" FT /inference="protein motif:Pfam:PF00270" FT misc_feature 738332..738355 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 738659..738685 FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT /inference="protein motif:ProSite:PS00039" FT misc_feature 738989..739219 FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 125.4, E-value 1.1e-34" FT /inference="protein motif:Pfam:PF00271" FT CDS 740053..740541 FT /transl_table=11 FT /locus_tag="CBO0644" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZI7" FT /db_xref="InterPro:IPR003251" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:A5HZI7" FT /protein_id="CAL82196.1" FT /translation="MNKEELKTIKQAIINENEGYEFYKMVSKDTNSEEAKKAFLELAEE FT ELKHVKWLKDLFTKLKDNKVDSIDLKEIQVASPKIFAWENLDREGASKAVSVFGIGIQM FT ERDSVDFYKKAAKDTEVQEAKVIYEELAKWEQSHLEQFYKEYETLMEEWWSEQGFEPF" FT CDS 740713..741150 FT /transl_table=11 FT /locus_tag="CBO0645" FT /product="MarR-family transcriptional regulator" FT /db_xref="GOA:A5HZI8" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZI8" FT /protein_id="CAL82197.1" FT /translation="MKKRNLLNKYIAMIDRASQGYLDEALKKYELSSGTYPFILVLYDN FT EGINQNALSEYVKVDKALSARAIKKLIELGYVEKIINSKDVRAYKLYLTEKAKAVVPEI FT RKASDGWLHIITNGLTEEEKETVECLLKNMYMNIKESKAKN" FT misc_feature 740803..741114 FT /note="Pfam match to entry PF01047 MarR, MarR family,score FT 53.3, E-value 5.7e-13" FT /inference="protein motif:Pfam:PF01047" FT CDS 741178..742611 FT /transl_table=11 FT /locus_tag="CBO0646" FT /product="putative multidrug export protein" FT /db_xref="GOA:A5HZI9" FT /db_xref="InterPro:IPR001411" FT /db_xref="InterPro:IPR004638" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:A5HZI9" FT /protein_id="CAL82198.1" FT /translation="MVNRTKEETNTYKNNWIILAIVVMSPFMACLDSSIVNVALPVMAK FT ELYTSMAGIQQVVTSYLIVISAAILIFGRLGDIKGKTSVFKYGFIIFVLGSFLCGISTT FT LNFLIFSRIVQAIGAAMTMSTSQGIITHTFPPNERGRALGISGTSVALGTLLGPPLGGL FT IISVVSWEYIFLINVPIGLVAFIAAMKYLPKDKVKSDQSLDIKGAILFIICIVALFWAM FT LKGQQIGYNHISIIISFIVSAICFIVFIILELKIENPMLDLAIFKNRVFSVNIFSAFVM FT FIGISCINIIQPFYLQDVLKLSPGKTGLIMMAYPIVLSIVAPISGYLSDKMGSKKLTLA FT GIVVASIGLFCMAFLNEQSTFLMITLLLSVVALGNGLFQSPNNSLVMSSVEKTKLGIAG FT GVNALIRNLGFIFGVSISTTILYNRMSYKIGYRVLNYVEGRGDVFIYGMRWVYFIAAVA FT CIFGFLVSLIDKTKLKSNN" FT misc_feature order(741223..741291,741334..741402,741436..741504, FT 741514..741567,741604..741672,741685..741753, FT 741790..741846,741859..741927,741985..742053, FT 742096..742164,742183..742242,742252..742311, FT 742372..742440,742513..742581) FT /note="14 probable transmembrane helices predicted for FT CBO0646 by TMHMM2.0 at aa 16-38, 53-75, 87-109, FT 113-130,143-165, 170-192, 205-223, 228-250, 270-292, FT 307-329,336-355, 359-378, 399-421 and 446-468" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 741229..742599 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -82.5, E-value 0.00031" FT /inference="protein motif:Pfam:PF00083" FT CDS complement(742733..743923) FT /transl_table=11 FT /locus_tag="CBO0647" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002847" FT /db_xref="UniProtKB/TrEMBL:A5HZJ0" FT /protein_id="CAL82199.1" FT /translation="MERVVGTVVRGLRCPIINEGDCIENIVVDSVLKASKVEGFEINDK FT DVVTVTESVVARAQGNYATIDQIAKDVKSKFGDDTIGVIFPILSRNRFAICLRGIAKGA FT KKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVDYVE FT YYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDN FT ILSSSVDGGGFNENYGLLGSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIY FT GDGAFKDPVGKIWELADPVVSPAYTEGLEGTPNEVKLKYLADNDFAHLKGDELKKAISE FT YIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK" FT CDS 744048..744923 FT /transl_table=11 FT /locus_tag="CBO0648" FT /product="LysR-family transcriptional regulator" FT /db_xref="GOA:A5HZJ1" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZJ1" FT /protein_id="CAL82200.1" FT /translation="MISKLDLYRVFGCVGKCKSFSKAAKELYMTQPAVSQSIMQLEKEL FT DIRLFTRTPKGVILTNEGEILFEYVTSAISLIEAGEKKMSDSKNLMIGDLKIGVGDTTS FT KYFLLSYLEKFHIKYPNVKLKILNGTTVELCNLVKTGDIDLAICNLPIEDSALEFKKCM FT EIQDIFVCGEKFNKTISKPLNFVEISKMPLILLDGKSNSRQYVENYLLSKGVNISPEIE FT LGAHDLLLQFAKINLGIACVVKEFSLEYLEKEILFEVKTKEPIPKRNIGFCYLKSVSLS FT PAARTFLETL" FT misc_feature 744060..744239 FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 77.5, E-value 2.9e-20" FT /inference="protein motif:Pfam:PF00126" FT misc_feature 744099..744164 FT /note="Predicted helix-turn-helix motif with score FT 1531.000, SD 4.40 at aa 18-39, sequence FT KSFSKAAKELYMTQPAVSQSIM" FT misc_feature 744102..744194 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 744309..744920 FT /note="Pfam match to entry PF03466 LysR_substrate, LysR FT substrate binding domain, score 76.4, E-value 6.3e-20" FT /inference="protein motif:Pfam:PF03466" FT CDS 745050..746744 FT /transl_table=11 FT /locus_tag="CBO0649" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR012547" FT /db_xref="InterPro:IPR018631" FT /db_xref="UniProtKB/TrEMBL:A5HZJ2" FT /protein_id="CAL82201.1" FT /translation="MKRIPYGISNFEVLREKNYLYVDKTFYIELLDRYAPYNFFIRPRR FT FGKSLFISMLENYYDINKKDKFEELFGDLYIGKNPTEEKNSFLVWKISFAGVDAGHGEE FT ELRNSFNSKVLLSAIKFINKYSNLLDVDTIPKGMESAEVIVQYISLLAIKINIPVFVLI FT DEYDNFVNELITGGKQSTYSGILHGEGFVKVFYKAIKDATADNFNRIFMTGVSPIMLDD FT LTSGFNITMNYTLDQNLNAMMGFTRDEISCIMDEVGIKDKELRKKICTDMTEYYNGYKF FT NEDSKSVFNPDMSMYFLNNYSLYDRYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIM FT TTGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKGQGLGGTVLKIPNYVIKTIYW FT EQYFQRINEDYNIQMKDVRDAIIQMRVYGNIQPLIELVGTILEDLSNRDLIKMDEKNIK FT MILLTLLGVDSTYFIKSEDENNKGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTL FT EKVKEEGLNQLKGYAESKMVKEELGTDNLKKALVIVVGKKDIYTVEL" FT misc_feature 745107..745139 FT /note="PS00284 Serpins signature." FT /inference="protein motif:ProSite:PS00284" FT CDS 747139..747456 FT /transl_table=11 FT /locus_tag="CBO0650" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR024465" FT /db_xref="UniProtKB/TrEMBL:A5HZJ3" FT /protein_id="CAL82202.1" FT /translation="MLDKIIEDVDEIYYSGDFGPEGIIIANKLKMRYGDKLKFWRFSVE FT DYLKIISHKEISHTSKAKLDNIKNDESSFLIERIKEKGLAGYQEMLIEDYIKDIINMMI FT V" FT CDS 747523..748191 FT /transl_table=11 FT /locus_tag="CBO0651" FT /product="putative exported protein" FT /db_xref="InterPro:IPR003848" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:A5HZJ4" FT /protein_id="CAL82203.1" FT /translation="MKNKIKRIFMVIMVIVLMGTAAIFFIDFRVRSESKKYIVNPKDVP FT EAEAILVLGAYVKPNGKLCDMLEDRVAVGIDLYKNNKAKKLLFSGDHGQANYDEVNGMK FT KVAEKKGVKKEDIFLDHAGFSTYESMYRAKEIFKAKKIIIVTQQYHLMRAVYIARQLGL FT DAYGVNSDQRNYWGIDKYKTREIAARVKDYFNVNLIKPKPKHLGDTIPVSGNGIVTHDK FT " FT sig_peptide 747523..747616 FT /locus_tag="CBO0651" FT /note="probabilty 1.000, with cleavage site probability FT 0.623 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature 747727..748014 FT /note="Pfam match to entry PF02698 DUF218, Uncharacterized FT ACR, COG1434, score 24.8, E-value 1.4e-07" FT /inference="protein motif:Pfam:PF02698" FT CDS 748322..751288 FT /transl_table=11 FT /locus_tag="CBO0652" FT /product="putative helicase" FT /db_xref="GOA:A5HZJ5" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR006935" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR021835" FT /db_xref="UniProtKB/TrEMBL:A5HZJ5" FT /protein_id="CAL82204.1" FT /translation="MDIMTRNKMVTITDNIEFKSIENGNDNLIKNEILKASEAGLVNKL FT IDSNLALTPKLVVNDYSKGSKVLSEIISELNKCEEFFISIAFITNSGILPLLETLKVLN FT KKGIKGKILTTDYLNFSEPKALKKLLEFPNIEIKLYSKENFHTKGYIFRYRDHYKLIVG FT SSNLTQTALTKNKEWNLKVSSLEEGSLTEGVISEFNQLWNEADKLTLEWIQTYEDIYRK FT QVEFTRKSKVPRLAQYKLKPNKMQVEAIQGLERLKENGQDRGLLISATGTGKTYLSAFE FT LRNYNPKRALFIVHREQIGKQALNSFRKVFGDTRSMGILSGTSKDVDKDFIFSTIQTLS FT KDEILQSFDKNEFDYIIIDEVHKAGANSYQKIVNYFNPKFLLGMTATPERSDDFDIFKM FT FNYNIAYEIRLQQALEEDLLCPFHYFGVSDVTIDGIELDDKIEFKYLVAEERVKHIIDK FT INFYGYCGERVKGLIFCSDKKEAKELSDIFNTKGYKTVALTGESLQEEREKAIERLEQD FT ETLNSLDYIFTVDIFNEGVDIPSVNQVVMLRPTKSSIIFVQQLGRGLRKNKFKEYVVII FT DFVGNYNSNFLIPIALSGDRTFNKDTIRKYVMEGTRVIPGCSTINFDEVSKKKIFESID FT LANFNNIKLIKESYFNLKQKIGRIPSLSDFDKFDSIDPLRIFGTKLGSYYNFLKKYDKE FT YTVELNDLEALFIEFISKKLASGKRPHELIIIKNIIHNKVDLIGELKHELKEMHNIDFK FT EITETNVINVSTNEFPTGSAKKTYSKCIFLERKYNYYIISSEFKKCIENIYFKEMVMEL FT IDFGLSRYNKNYSNRYMNTNFQLYQKYTYEDVCRLLEWEQGEVALNIGGYKYDKITKTY FT PVFINYDKSDDIEKTINYEDRFESESQLIAISKSGRTIESQDIVQAYNAEKDGVEMTLF FT VRKNKDDKISKEFYFLGKIKTVGKPHQFTMKNTTKTAVEIRYKLITKAREDIYDYIIS" FT misc_feature 749780..750022 FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 61.8, E-value 1.6e-15" FT /inference="protein motif:Pfam:PF00271" FT CDS complement(751328..751726) FT /transl_table=11 FT /gene="mutT1" FT /locus_tag="CBO0653" FT /product="putative mutator protein" FT /note="Also similar to CBO2085 (71.21 38d)" FT /db_xref="GOA:A5HZJ6" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="InterPro:IPR020476" FT /db_xref="UniProtKB/TrEMBL:A5HZJ6" FT /protein_id="CAL82205.1" FT /translation="MKKLIKVVGAIIENENNEILCALRSTKMSLPNLWEFPGGKIEKGE FT SLADAIVREIKEELDCTIIFIDVFNENTHEYDKFIVNLTTARCKLIEGEPTANEHDKLI FT WIPKENLISLNWAPADIPAVEQLAKEKM" FT misc_feature complement(751337..751717) FT /note="Pfam match to entry PF00293 NUDIX, NUDIX FT domain,score 78.2, E-value 1.8e-20" FT /inference="protein motif:Pfam:PF00293" FT misc_feature complement(751553..751612) FT /note="PS00893 mutT domain signature." FT /inference="protein motif:ProSite:PS00893" FT repeat_region 751854..751908 FT /note="intergenic repeat 1" FT CDS 752190..753029 FT /transl_table=11 FT /locus_tag="CBO0654" FT /product="transcriptional antiterminator" FT /db_xref="GOA:A5HZJ7" FT /db_xref="InterPro:IPR004341" FT /db_xref="InterPro:IPR011608" FT /db_xref="UniProtKB/TrEMBL:A5HZJ7" FT /protein_id="CAL82206.1" FT /translation="MVINKILNNNAVITFDDKGKEIIIMGKGIAYGKRKGDFIEESKIT FT KKFILSSMEYSNHLVDILSSIPTEYIELCHDIVQYAKQKLSIELDDSLYISLMDHITTS FT IERYNKGVILKNKLLWEIKHFYKNEYEIGLYGIDMIKKNYGLTMDEDEAGFIALHIVSA FT EVSNNIKDVYEITGFIQNITNIIKYYFNRDFNTDSYNYYRFITHLKFFGYRVFSKKSNK FT NDSINNNLLDIIKEEYKEAYLCSLKIKQFIEKKYYFYLNEDEILYLTIHIAKLISDE" FT misc_feature 752190..752366 FT /note="Pfam match to entry PF03123 CAT_RBD, CAT RNA binding FT domain, score 85.7, E-value 9.9e-23" FT /inference="protein motif:Pfam:PF03123" FT misc_feature 752391..752678 FT /note="Pfam match to entry PF00874 PRD, PRD domain, score FT 120.3, E-value 3.7e-33" FT /inference="protein motif:Pfam:PF00874" FT misc_feature 752712..753014 FT /note="Pfam match to entry PF00874 PRD, PRD domain, score FT 83.8, E-value 3.7e-22" FT /inference="protein motif:Pfam:PF00874" FT CDS 753234..755075 FT /transl_table=11 FT /locus_tag="CBO0655" FT /product="PTS system, beta-glucoside-specific IIabc FT component" FT /EC_number="2.7.1.69" FT /db_xref="GOA:A5HZJ8" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR011297" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:A5HZJ8" FT /protein_id="CAL82207.1" FT /translation="MNYEKMASEILKAIGGQENINSLVHCATRLRFNIKSEEKANDEEV FT KSIKGVLSLVKKGGQYQLVIGSDVDKVYKEIMKIAKLDSSKDNNEKKKEGIVDRVLSVI FT TGSIAPMIPLLAGAGMGKVLLLILSLLGILDKSSQTFIILKFIFDTGFYFMPVFVAFSA FT AKIFKCNQYLASFVCLSMLHPEWVSLVAAGKPVYFLGIPLSLAKYSSQLVTAILIVWVM FT SYIEKYVYKYVPDMIKVFMAPLLVILITAPLGFVIIGPVGNYIAQLVADTVLYVQQHFG FT IVAIPILAAVYPWLVSIGMHKALSPICVMLIEQNGFDPVTRVIALCSNISQAAAALAVS FT LKTKNKELKQIAFSSSITAFLGGITEPAMYGVTLKLKKPMYACMIGGVVAGLFAGIVNL FT KAFVYVTPGLLSLPMWVSEGTNNLIHAIITLIIAAVVTFIATLIIGFDDPVEQNKEEQK FT KVMEENIYKNILTPVKGDTVPLKDIDDETFSSGIMGAGIGIIPSEGKVYAPGDGIVSAC FT FKTGHAIGMIINDIEVLIHVGIDTVSLDGKYFNLAIKQGQNVKKGDLLLEFDIDKIKDA FT GYDLTTIVIITNSNDYMDVLPTNKNKVDKEDVLLTVI" FT misc_feature 753252..753356 FT /note="Pfam match to entry PF00367 FT PTS_EIIB,phosphotransferase system, EIIB, score 60.9, FT E-value 2.9e-15" FT /inference="protein motif:Pfam:PF00367" FT misc_feature 753546..754394 FT /note="Pfam match to entry PF02378 FT PTS_EIIC,Phosphotransferase system, EIIC, score 134.4, FT E-value 2.1e-37" FT /inference="protein motif:Pfam:PF02378" FT misc_feature order(753567..753635,753654..753722,753822..753890, FT 753948..754016,754059..754127,754188..754256, FT 754284..754352,754389..754457,754500..754568) FT /note="9 probable transmembrane helices predicted for FT CBO0655 by TMHMM2.0 at aa 117-139, 146-168, FT 202-224,244-266, 281-303, 324-346, 356-378, 391-413 and FT 428-450" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 754686..754997 FT /note="Pfam match to entry PF00358 FT PTS_EIIA_1,phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 1, score 174.5, E-value FT 1.9e-49" FT /inference="protein motif:Pfam:PF00358" FT CDS 755087..755905 FT /transl_table=11 FT /locus_tag="CBO0656" FT /product="putative phophoesterase" FT /db_xref="GOA:A5HZJ9" FT /db_xref="InterPro:IPR003141" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/TrEMBL:A5HZJ9" FT /protein_id="CAL82208.1" FT /translation="MIYADLHVHTNHSDGICEIANVLDMAKKKGIKAIAITDHDTVDQF FT DEINELGRKMDLEVVKGVEMSCYDYDVFKKVHIVGLWLNKNATHVKKLCDKTLKCRDNY FT HRDLIKELSEKGYDITYEDAKKYSKYSIVFKMNIFQALKEKYKHEMTKERYNELFASKT FT SKETDLKMGYTPVMQGIEAIKKDGGIPIIAHPCQYDNYDEIEKYVKYGLQGIEINHSKM FT KKIDYKKTLNFAAKYNLAKSGGSDFHDPDLIEFGCYGLTKEQYEKLKHFR" FT misc_feature 755096..755287 FT /note="Pfam match to entry PF02231 PHP_N, PHP domain FT N-terminal region, score 68.3, E-value 1.7e-17" FT /inference="protein motif:Pfam:PF02231" FT misc_feature 755570..755854 FT /note="Pfam match to entry PF02811 PHP_C, PHP domain FT C-terminal region, score 14.4, E-value 0.03" FT /inference="protein motif:Pfam:PF02811" FT CDS 756532..757242 FT /transl_table=11 FT /locus_tag="CBO0657" FT /product="Crp-family transcriptional regulator" FT /db_xref="GOA:A5HZK0" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR001808" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012318" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:A5HZK0" FT /protein_id="CAL82209.1" FT /translation="MKECTCGRCHHNICARKVPIFSSLSEEELIKIVNMTGHEDFKKGE FT AICNEGDKSETLIIINEGKVKLCKLTKEGKEQIIHILSSGDFFGELNLFNDNKSYNFSA FT YAISHVKICTLTKNKMDEILLKNPDISLKILKEVTKRLAETETLAQNLATNDADIRIAN FT MILDFGEKYGVNKEQYIEIKLPINREEMANYVGVTRETISRKLSKFEDLDIIKLVGNKV FT IIIKDEDALKEFIE" FT misc_feature 756634..756918 FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 92.3, E-value 1e-24" FT /inference="protein motif:Pfam:PF00027" FT misc_feature 757081..757176 FT /note="Pfam match to entry PF00325 crp, Bacterial FT regulatory proteins, crp family, score 39.1, E-value FT 1.1e-08" FT /inference="protein motif:Pfam:PF00325" FT misc_feature 757087..757152 FT /note="Predicted helix-turn-helix motif with score FT 2015.000, SD 6.05 at aa 186-207, sequence FT INREEMANYVGVTRETISRKLS" FT CDS 757401..758633 FT /transl_table=11 FT /gene="norV" FT /gene_synonym="flrD" FT /locus_tag="CBO0658" FT /product="anaerobic nitric oxide reductase flavorubredoxin" FT /db_xref="GOA:A5HZK1" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR008254" FT /db_xref="InterPro:IPR016440" FT /db_xref="UniProtKB/TrEMBL:A5HZK1" FT /protein_id="CAL82210.1" FT /translation="MMKNVKIKEKIYLVGKIDDRDVPFHRLTLTKGTTYNSYLLLTEKP FT TIIDTVDISFGREYIQSLKNLINLEKIQYIVINHTEPDHSGALGSLAYNAKNATIVCTQ FT KAVDQLKAMYKLHNRTFLVVKDGDTLDIGGKTLEFMETPYLHTEETMITFAKEDKILFP FT CDIFSTHIANYEYFNDKAKEDILEDFKTYYSLIMHPHRRYVQNMIKKIRSLDIEIIAPS FT HGFILRENAKKFIDIYDEMSKNTNVDKKVLILYSTMTNNTKKISELIKEHFEKDNINTK FT LIDVNKASDEDILKNVKTSDAVLVGTSTKYGDMIGRLEEVLKSLKHMDLENKIAAAFGS FT YGWSGEGIEVVQDYLKETNMKVLSTSYIIKSTGMIDVRFPIRIKFSPEENDKEEIKKAT FT IFIADLLLNSI" FT misc_feature 757500..758069 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 64.1, FT E-value 3.2e-16" FT /inference="protein motif:Pfam:PF00753" FT misc_feature 758151..758618 FT /note="Pfam match to entry PF00258 flavodoxin, FT Flavodoxin,score 40.8, E-value 3.3e-09" FT /inference="protein motif:Pfam:PF00258" FT CDS 758693..759391 FT /transl_table=11 FT /locus_tag="CBO0659" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZK2" FT /db_xref="InterPro:IPR007500" FT /db_xref="InterPro:IPR012312" FT /db_xref="InterPro:IPR019903" FT /db_xref="UniProtKB/TrEMBL:A5HZK2" FT /protein_id="CAL82211.1" FT /translation="MKNTININQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALK FT EKGINSDEFIEKLNEEYEKFVESNEEYIDWRKEKPVNLMENIVDTHHDYTKRELKEIDA FT LLSKILKVHFGHHGEELLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDENVKR FT EIDKFIKETEDEHDKAGDILKELEKITRDFKAPEDACTSYRLTYDKIHSLEKDLFIHIY FT KENSVLFEMI" FT misc_feature 758711..758938 FT /note="Pfam match to entry PF04405 ScdA_N, Domain of FT Unknown function (DUF542), score 69.1, E-value 9.6e-18" FT /inference="protein motif:Pfam:PF04405" FT misc_feature 758939..759157 FT /note="Pfam match to entry PF03794 HHE, Domain of Unknown FT function, score 25.6, E-value 0.00012" FT /inference="protein motif:Pfam:PF03794" FT misc_feature 759191..759388 FT /note="Pfam match to entry PF03794 HHE, Domain of Unknown FT function, score 29.1, E-value 1.1e-05" FT /inference="protein motif:Pfam:PF03794" FT CDS 759417..760172 FT /transl_table=11 FT /locus_tag="CBO0660" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007380" FT /db_xref="InterPro:IPR012312" FT /db_xref="UniProtKB/TrEMBL:A5HZK3" FT /protein_id="CAL82212.1" FT /translation="MDNKRIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAE FT QQLIEEGMEPQDLRHLCDVHMEVLKDELSKIKTKISKGHVVYTLIDEHDKILRFLEDLE FT KVNSDIQNTKSYNEAKEKIHSLHNLAESILDAENHHQREEKVLFVEMEKREITGPTRIM FT RMEHDDLRARKKELKRLSENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSS FT LEAIKGKNIWDDMKKRCDEIGYCSFTFES" FT misc_feature 759423..759713 FT /note="Pfam match to entry PF04282 DUF438, Family of FT unknown function (DUF438), score 31.4, E-value 3e-08" FT /inference="protein motif:Pfam:PF04282" FT CDS complement(760245..760664) FT /transl_table=11 FT /locus_tag="CBO0661" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZK4" FT /protein_id="CAL82213.1" FT /translation="MFKKRSKAFFTGLILASIYLIYVISYFYGVLGKGDTAEQIGSGIA FT TALVTPHIVILAIGVMFGWLAFGLSSSGFALTASILYTVAGVMFIPYIFFVIPSIILGF FT VGYANQKNINNKAKAKRRVKVHKKPNVNNKTNLKA" FT misc_feature complement(order(760341..760409,760467..760535, FT 760569..760637)) FT /note="3 probable transmembrane helices predicted for FT CBO0661 by TMHMM2.0 at aa 10-32, 44-66 and 86-108" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(760422..760469) FT /note="PS00012 Phosphopantetheine attachment site." FT /inference="protein motif:ProSite:PS00012" FT sig_peptide complement(760559..760664) FT /locus_tag="CBO0661" FT /note="probabilty 0.834, with cleavage site probability FT 0.260 between residues 34 and 35" FT /inference="protein motif:SignalP:2.0" FT CDS 761332..762516 FT /transl_table=11 FT /gene="gltS" FT /gene_synonym="gltC" FT /locus_tag="CBO0662" FT /product="sodium/glutamate symport carrier protein" FT /db_xref="GOA:A5HZK5" FT /db_xref="InterPro:IPR004445" FT /db_xref="UniProtKB/TrEMBL:A5HZK5" FT /protein_id="CAL82214.1" FT /translation="MTLELDMIQTTTLAILFYYIGIFIKSKVSILEKFCIPAPVVGGLI FT FAILNLIFTESGFISISLDTTLQKPFMLAFFTTIGFGASFKMIKQGGLHVIMFFIAALL FT LVISQDVLGVVMAKFIGEDPLLGLIVGSVTMTGGHGTGATFGALFESEYGLVGASTTAM FT AAATFGLVCGSLIGGPIAKNLISKNNLKNSSDEFFEANSDDCEEVSYKTLFNTFSLIFI FT SMGLGSILEMLFTNLGIVLPSYVDAMIVAAIILNIGEQTNKWKINSKCVDIIGNMSLNV FT FLSMALIGLKLWELKSTAGPLLILLIGQAVLMFIFAYFITFRLMGKDYDAAVMSSGHCG FT FGMGATPNGIANMEAITSKYGASPKAFFILPVVGAFLIDFSNSLVITLFVNLFK" FT misc_feature 761338..762417 FT /note="Pfam match to entry PF03616 FT Glt_symporter,Sodium/glutamate symporter, score 502.0, FT E-value 4.7e-148" FT /inference="protein motif:Pfam:PF03616" FT misc_feature order(761344..761397,761431..761499,761542..761595, FT 761614..761682,761710..761778,761797..761865, FT 761965..762033,762037..762105,762148..762216, FT 762235..762303,762433..762501) FT /note="11 probable transmembrane helices predicted for FT CBO0662 by TMHMM2.0 at aa 5-22, 34-56, 71-88, FT 95-117,127-149, 156-178, 212-234, 236-258, 273-295, 302-324 FT and 368-390" FT /inference="protein motif:TMHMM:2.0" FT CDS 763125..763592 FT /transl_table=11 FT /locus_tag="CBO0663" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZK6" FT /db_xref="InterPro:IPR011992" FT /db_xref="UniProtKB/TrEMBL:A5HZK6" FT /protein_id="CAL82215.1" FT /translation="MKNSIDLFQRNLLYKEVFNDVIQCNEVTREYGLKLSDKDVKEIID FT TRNIALQKSGRIEFNGQIINKIITAFCDSPYISQYNYSETINELVEIFYNYKNETLDYI FT SDDELIEIMKENFDNYCQGSLEILEGKALYRIANNIKSGFKDYTNLDNEKD" FT CDS 763599..764942 FT /transl_table=11 FT /locus_tag="CBO0664" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZK7" FT /protein_id="CAL82216.1" FT /translation="MGNTIQRYDYSVENKFSEESFFKDVLVACYEKKLLDENTLARIYY FT ERMELLRVKLKYYTKDESSSVMTEVAESILRCIDYTIGIYLKNFENIELITEELKHTSL FT DDMLKMGQDLIKNKKLECKKLFNDIKANKLKVDNYSYNDTVDDGLSPFFKEYDDFFASH FT ETPGCSIDYQLYIDTMNFMGIEYVYNYLYDLSLENEFCNKFNIDEINKLLKGYDKKCEL FT LLINIFELVLINSLGLIICNKDLSSLNINNLDREIIKNKLEKLSIGELNAELIKDAKTC FT LEVLEIKNAKLMNYIKKGILNIALLINERIKLNKLETVFISFNEEEPKEIIEYTDGKKM FT ANSKFKKLTEEIRECSLVEDKILLIKNNIKSLEDLVDMLNADCLFGYEYITFFKSLSKM FT EIVLLSKYISDLSFEDEKDLYVEFNKYILSLRKEEQRAINELKKRINL" FT CDS complement(765192..765395) FT /transl_table=11 FT /locus_tag="CBO0665" FT /product="putative exported protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZK8" FT /protein_id="CAL82217.1" FT /translation="MKKIIKKASIGVMSLCLLLGMGLFNPVSARPVCSCPDPNIDSWKI FT DNCTIYYVCRNCHWSSTWNTCK" FT sig_peptide complement(765305..765395) FT /locus_tag="CBO0665" FT /note="probabilty 1.000, with cleavage site probability FT 0.814 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT CDS 765849..766835 FT /transl_table=11 FT /locus_tag="CBO0666" FT /product="metallo-beta-lactamase superfamily potein" FT /db_xref="GOA:A5HZK9" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:A5HZK9" FT /protein_id="CAL82218.1" FT /translation="MRETYENIYLEELPLPNNPLKYLNFYIVKGKDKSMIIDTGFNRED FT TKERMMEIFKELDLKPENTILFLTHLHSDHTGLATYFQEIGLTVYISKTDGDLLNGSVE FT KSGPMWKGTIQRAMWQGLEEEQLDIEDNPGFKFRPISHINFVPAIPGEYIQIGYYNFEI FT IDLRGHTPGMIGLYEKKHKILFCGDHILGKITPNITFWGFEYGDMLGTYFKSLDFVYNM FT DIDHLFSSHRFLIEDHRRRINELYLHHEKRLDEIRQVLRKFGACTVKQVTKELHWDIKS FT KNWDEFPKSQKWFAAGEAHAHLEHLRALGEVTMEEKNRILYYKMCLT" FT misc_feature 765912..766541 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 78.0, FT E-value 2e-20" FT /inference="protein motif:Pfam:PF00753" FT misc_feature 765948..765983 FT /note="PS00136 Serine proteases, subtilase family,aspartic FT acid active site." FT /inference="protein motif:ProSite:PS00136" FT CDS 766986..767120 FT /transl_table=11 FT /locus_tag="CBO0667" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZL0" FT /protein_id="CAL82219.1" FT /translation="MHVNAIEWFVSMLAKISFSIIYIESHIDNLCGFFDSQILFICIF" FT CDS 767177..768070 FT /transl_table=11 FT /locus_tag="CBO0668" FT /product="putative branched-chain amino acid transport FT system, permease protein" FT /db_xref="GOA:A5HZL1" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:A5HZL1" FT /protein_id="CAL82220.1" FT /translation="MEVVSSILMQSLILSIMVMGVYISYKILDFPDMSADGSFTLGVAI FT VAVLLTKGVSPITASIVALIGGLVAGLLTGILNVKIKISNLLSGILVMGILYSFNLRIM FT GKANIPIFSEKNIFYDFNPLVIMLFIVILIKILIDLFLKTGLGYLLKGVGDNSQMIKSL FT GIEVGKIKILGLMLSNGLIAFSGGIMAQYQGFSDASMGIGTLILGIASIIIGTSIIKRK FT SFIKETSMVIMGTIIYQGTIYLAMTLGVSTVDLKMITSLIIIVFLALREIDNKYEEKSW FT RWIKNVRNSKFIKKLS" FT misc_feature 767183..767977 FT /note="Pfam match to entry PF02653 FT BPD_transp_2,Branched-chain amino acid transport system / FT permease component, score 72.4, E-value 1e-18" FT /inference="protein motif:Pfam:PF02653" FT misc_feature order(767192..767260,767345..767413,767432..767491, FT 767549..767617,767678..767746,767774..767833, FT 767867..767935) FT /note="8 probable transmembrane helices predicted for FT CBO0668 by TMHMM2.0 at aa 10-27, 40-62, 91-113, FT 120-139,159-181, 202-224, 234-253 and 265-287" FT /inference="protein motif:TMHMM:2.0" FT CDS 768033..768788 FT /transl_table=11 FT /locus_tag="CBO0669" FT /product="ABC transporter ATP-binding protein" FT /db_xref="GOA:A5HZL2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZL2" FT /protein_id="CAL82221.1" FT /translation="MLEIQNLSKSFHNSYMGENRLFHNLNLTINEGDFVSIIGSNGTGK FT STLLNILSGVVKETSGNIILKGVDITKLPEHKRTKIISRVFQNPELGTCPSMTVRENLS FT LALNKGKLTNIKYCLRYKDDYLQLLLNDISLDFKKMLDIEVKYLSGGQRQVLSLIMASV FT NDPKVLLLDEHTAALDPKTSGEVMAITEKIVTQKNITSLMVTHNLRDAINYGNRLIMLH FT KGKIILDLNEKEKRNLTVEDILKKFEYAV" FT misc_feature 768126..768704 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 182.8, E-value 6e-52" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 768147..768170 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 768474..768518 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 768819..769778 FT /transl_table=11 FT /locus_tag="CBO0670" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR007487" FT /db_xref="UniProtKB/TrEMBL:A5HZL3" FT /protein_id="CAL82222.1" FT /translation="MKKLVTGILLTISILTLAACGKTTKLNIGINQIVEYVALDDNRKG FT FIKALEEAGYKDGDNIKIDYKNAQGDIGVSQTIAKKFASDKKDLVFAIGTPAAQSVFNA FT TKQTPIIISAVTDPIKAGLVNSLEKPGKNVSGTIDYLPVENQLKLLKNLVPKAKKIGFI FT YNTSEVNSGVQLNELKKAAKGYEIIETGVTSTNEINNAIANLVNKIDVLYAPTDQLVVS FT SMPIIAKHTLDAKIPIIAAEKGSVEAGALATVGIDYYQLGYETGKMAVSVLKGEDISKM FT PIKMTSKTEIYINKNSLEKLGIAKGNLDNLGNVKYVEK" FT sig_peptide 768819..768879 FT /locus_tag="CBO0670" FT /note="probabilty 0.921, with cleavage site probability FT 0.783 between residues 21 and 22" FT /inference="protein motif:SignalP:2.0" FT misc_feature 768846..768878 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 768897..769763 FT /note="Pfam match to entry PF04392 DUF534, Protein of FT unknown function (DUF534), score 275.5, E-value 7.4e-80" FT /inference="protein motif:Pfam:PF04392" FT CDS 769792..770172 FT /transl_table=11 FT /locus_tag="CBO0671" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZL4" FT /protein_id="CAL82223.1" FT /translation="MRYVNNNDITVDGAGVGLSADSDIENEKLNYELNVWYNSKIGTIT FT FTQWKSSKRYDDIKKKVNPIEIDGKKVFKYEDYVEIELDKKSKVENYIWEENGSYCEAS FT ITEGNGNTDEIAKAFVNSKSID" FT CDS 770892..771575 FT /transl_table=11 FT /locus_tag="CBO0672" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZL5" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:A5HZL5" FT /protein_id="CAL82224.1" FT /translation="MEKDLLDKNYIKKFINIIDNDFIPNLKMKSINPSDPIKVEFVPKP FT WILLGCGNYAGVFTHPDFDNLAIKIYASGRDGLREEIEVYKTIGEHPAYSKLLYSKNNY FT LILKRLKGITFYNSLIKGIKIPKHIIKDIDNALEYARERGLNPHDVHAKNVMIVNNRGV FT VVDISDFKHKEYCCLWHDFKKAYYKLYIPFVYKLDIPIPNFVLDTIRRMYKRYKRYKRV FT ITGYL" FT CDS complement(771866..773287) FT /transl_table=11 FT /locus_tag="CBO0673" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZL6" FT /protein_id="CAL82225.1" FT /translation="MKLNLNEDDILMLLNDITINENEFSDVDLNEIEKKKICENIISKV FT QPKKSKSKRNFIAAAVILLISIPLLISPKNVLANMLEKLTVISGIGEVNVSSDKPRILK FT NSLKKGNITLANMYVDNNKIIVTLTIEPEELTPSYYTVRDEHGNSYELHRSDNLAMMPD FT NHIGSYRAEYYGEVKKANKYTLNIIDNDKKLTKATFKLKNSHFKEAPESKILYTATNGI FT TTLNVTSLRKEGNILKVDYYFTDTLPDFKWKRIDTLNYGTFQEGKQWGLKEPINTKSIN FT NNPTEAPNIMISDEYNNAVYGHNNTNYLDQENESLFDLSKLTGKKLKLTVLNVNYSFGN FT DYVDKNNSFKLDNDFKLELDVPKSGKRILNKTGEYKGFKYNIISIERLSNNSVELIYNY FT INDSNAKFQIHNISFDSITPWENGSSSTKPYNNNIKHILKKKSKIGDKLQLNNIRCSFY FT SVGPFEIDLDPSTIK" FT misc_feature complement(773072..773125) FT /note="1 probable transmembrane helix predicted for CBO0673 FT by TMHMM2.0 at aa 55-72" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(773284..773847) FT /transl_table=11 FT /locus_tag="CBO0674" FT /product="RNA polymerase sigma factor" FT /db_xref="GOA:A5HZL7" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:A5HZL7" FT /protein_id="CAL82226.1" FT /translation="MKIDDKNFLLELKNKNPKALEFIINTYCNLVFKIVLNVLGTDNYE FT NVKECVNDIYLLIWNKNHLYNPEKSSFKNWLLAVSKYKAIDYKRSLSKVDSLQIEEQVL FT ISKIDVENEYILKEKKEELIKLLQREHELDRELFIRKYILDEDMKSICKKFNLSKGAIY FT NRLWRTKNSLIRKLNISDEVEVSK" FT misc_feature complement(773347..773412) FT /note="Predicted helix-turn-helix motif with score FT 1240.000, SD 3.41 at aa 146-167, sequence FT EDMKSICKKFNLSKGAIYNRLW" FT misc_feature complement(773566..773781) FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 24.3, E-value 0.00031" FT /inference="protein motif:Pfam:PF04542" FT CDS 774076..775035 FT /transl_table=11 FT /locus_tag="CBO0675" FT /product="putative dihydrouridine synthase (tRNA FT modification protein)" FT /db_xref="GOA:A5HZL8" FT /db_xref="InterPro:IPR001269" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR018517" FT /db_xref="UniProtKB/TrEMBL:A5HZL8" FT /protein_id="CAL82227.1" FT /translation="MKYYLAPMEGITGYIYRSSYEKFFNNIDKYFTPFIVPNKSTSLKT FT KELRDILPENNKGMNIVPQILTNDSEGFIITARKLQQLGYNEINLNLGCPAGTVVSKNR FT GSGFLAKREELDIFLDEIFKIDDMKISIKTRIGKDSPEEFYELIKIYNKYPIEELIIHP FT RTQKDFYGHKPDLDVFKDALSLSSNPICYNGDIFTVSDYNRLIKTFPKVKTIMLGRGIL FT ANPGLINEIKNNTTIDKEVLKEFHDEILNKYIELYNEDRNALFRMKELWGYMIHIFSNN FT KKYAKKIKKAQKLNCYNAAVLSLFREQEIIKEVELFGN" FT misc_feature 774085..775002 FT /note="Pfam match to entry PF01207 Dus, Dihydrouridine FT synthase (Dus), score 37.5, E-value 1.1e-08" FT /inference="protein motif:Pfam:PF01207" FT misc_feature 774337..774393 FT /note="PS01136 Uncharacterized protein family UPF0034 FT signature." FT /inference="protein motif:ProSite:PS01136" FT CDS 775171..775635 FT /transl_table=11 FT /locus_tag="CBO0676" FT /product="transcription elongation factor" FT /db_xref="GOA:A5HZL9" FT /db_xref="InterPro:IPR001437" FT /db_xref="InterPro:IPR006359" FT /db_xref="InterPro:IPR022691" FT /db_xref="InterPro:IPR023459" FT /db_xref="UniProtKB/TrEMBL:A5HZL9" FT /protein_id="CAL82228.1" FT /translation="MKNILTEENMNKLKEELEYRMTKKRAEIAKEKLEAAAHGDRSENA FT EYKEACANYRENDNRIQYLLTMISTASVIDEKNQNKSVLGVNSKCKIKFIEDEFETNVS FT LVTTMDADPEKMLISVESDLGKALMGKKVGDVAEVDAPGEKYTVEVLEII" FT misc_feature 775171..775389 FT /note="Pfam match to entry PF03449 GreA_GreB_N,Prokaryotic FT transcription elongation factor, GreA/GreB,N-terminal FT domain, score 59.0, E-value 1.1e-14" FT /inference="protein motif:Pfam:PF03449" FT misc_feature 775399..775629 FT /note="Pfam match to entry PF01272 GreA_GreB, Prokaryotic FT transcription elongation factor, GreA/GreB, C-terminal FT domain, score 27.1, E-value 5.5e-06" FT /inference="protein motif:Pfam:PF01272" FT CDS 775797..776549 FT /transl_table=11 FT /locus_tag="CBO0677" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZM0" FT /protein_id="CAL82229.1" FT /translation="MFYCPYYFFRKNMGNNEVYIIDRKKGDVNGDKVEDTILLIGNKPS FT GTDSPFVSNIRLVIKDGKTGKGITVPLKENSGYNPTIFLGDFTGDKIKDILVSIDSGGS FT GGFGFYYIYSFANNQLKLIFDFEKFGEEYTYEVNYKDNYRVEVISENLKIKYIIDITYK FT GKEYLNEIYDLNGKLKEPISGFVIPLSNLYPIDFERDGTYELYVFQRIAGRYNADGLGY FT VQTALKWEKDKFTTFFQNVGIQGKYIGG" FT CDS 776824..778281 FT /transl_table=11 FT /gene="hsdM" FT /locus_tag="CBO0678" FT /product="type I restriction enzyme M subunit" FT /EC_number="2.1.1.72" FT /db_xref="GOA:A5HZM1" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR002296" FT /db_xref="InterPro:IPR003356" FT /db_xref="InterPro:IPR022749" FT /db_xref="UniProtKB/TrEMBL:A5HZM1" FT /protein_id="CAL82230.1" FT /translation="MITGELKSKIDRIWETFWTGGITNPLEVIEQFTYFLFIKDLDDNE FT ILAESDAELLGIPFEGMFPSDKQYLRWSKFKNEPAGEMYRIVSEEVFPFIKDIHGDEQS FT AYSKYMSDAMFKIPTPLMLSKIVDSIDNINMNDKDTKGDLYEYLLSKIAQAGTNGQFRT FT PRHIIKMMAELMKPTPEDIIVDPAMGTAGFLVGAEEYLRENHNDLFFVQGLKEHFNNKM FT FNGFDMDRTMLRIGAMNMMLHGVDNPNIEYKDSLSETNKDSEKYTLVLANPPFKGSLDY FT EAVSADLLKVSKTKKTELLFLALFLRILKTGGRCASIVPDGVLFGSTKGHKDIRREIVD FT NNKLEAIISMPSGVFKPYAGVSTAIMIFTKTGTGGTDKVWFYDMKADGYSLDDKRNPIE FT DNDMPDIIERFSNLDKEEDRNRTEQSFFVPVEEIRENDYDLSINKYKEIEYEEVVYDEP FT KVILERVKKLEKEITEGIDELEKMIEG" FT misc_feature 776827..777468 FT /note="Pfam match to entry PF02506 Methylase_M, Type I FT restriction modification system, M protein, score FT -51.0,E-value 8.3e-06" FT /inference="protein motif:Pfam:PF02506" FT misc_feature 777628..777648 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT misc_feature 777634..778140 FT /note="Pfam match to entry PF02384 N6_Mtase, N-6 DNA FT Methylase, score 85.2, E-value 1.4e-22" FT /inference="protein motif:Pfam:PF02384" FT CDS 778376..779536 FT /transl_table=11 FT /gene="hsdS" FT /locus_tag="CBO0679" FT /product="type I restriction enzyme S subunit" FT /db_xref="GOA:A5HZM2" FT /db_xref="InterPro:IPR000055" FT /db_xref="UniProtKB/TrEMBL:A5HZM2" FT /protein_id="CAL82231.1" FT /translation="MLVKYKLCELGDILTGNTPSKKNGEFYDTKDIMFIKPDDINNNIT FT EIECSKEYISNKAEKKARIIPKDSLLITCIGSIGKIAINKEKSAFNQQINSIVHNEKII FT CSKYLAYVLMINKQRLESISNAPVVPIINKTQFSEFEVYIHEEKEIQEKIVNVLDKARS FT LIDKRKAQIEVLDELVKSRFIDMFADLKGEKHLTLGECTNFIDYRGKTPVLSDSGIRII FT NAKSVGNGFFKYIDEYISEETFNSWMKRGFPVPGDVLFVTEGHTFGNICRIPSDLQKFA FT MGQRIITIQGNKEILNNAFLAQYMQTISFQIDIDKYKTGSSAQGIRSKELKKILIPIPQ FT IELQNQFTDFVNQVDKLKFEMEKSLKELEDNFNSLMQRAFKGELFN" FT misc_feature 778388..778864 FT /note="Pfam match to entry PF01420 Methylase_S, Type I FT restriction modification DNA specificity domain, score FT 81.0, E-value 2.5e-21" FT /inference="protein motif:Pfam:PF01420" FT misc_feature 778952..779443 FT /note="Pfam match to entry PF01420 Methylase_S, Type I FT restriction modification DNA specificity domain, score FT 39.3, E-value 9.1e-09" FT /inference="protein motif:Pfam:PF01420" FT CDS 779624..779809 FT /transl_table=11 FT /locus_tag="CBO0680" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZM3" FT /protein_id="CAL82232.1" FT /translation="MEKLITEIEYEMVNSLNNMQMEELHKVLLKKLQDLDFIHKANNKN FT LNNEEVDYCNIFICAK" FT CDS 780001..780234 FT /transl_table=11 FT /locus_tag="CBO0681" FT /product="conserved hypothetical protein" FT /note="Similar to the C-terminal region of Clostridium FT tetani conserved hypothetical protein ctp44 SWALL:Q899X1 FT (EMBL:AF528097) (306 aa) fasta scores: E(): 0.00017,37.37 FT 38d in 99 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZM4" FT /protein_id="CAL82233.1" FT /translation="MGKAEEELRMTDLGKSLIQEEIEKRKAELLIKMLMQKFKKVSDEY FT KGKIKILPEETIELIATYIFELNSVEELEKYF" FT CDS 780378..783725 FT /transl_table=11 FT /gene="hsdR" FT /locus_tag="CBO0682" FT /product="type I restriction enzyme R subunit" FT /EC_number="3.1.21.3" FT /db_xref="GOA:A5HZM5" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR006935" FT /db_xref="InterPro:IPR007409" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR017946" FT /db_xref="InterPro:IPR021943" FT /db_xref="UniProtKB/TrEMBL:A5HZM5" FT /protein_id="CAL82234.1" FT /translation="MCTNFEFLKFKKEFTSFSDACIEAEKSILVSPSTTAILSRRALEL FT AVKWVYSFDEDLEIPYRDNISSLIHSGSFLELIDSEMFPLLKFIISLGNVAVHTNKSIT FT REEAILSLHNLYQFINWIDYCYGDDYKEKKFDENSLLQGEEKRVRPEELKDLYDKLSSK FT DKKLEEIIKGNEELRKEITQKRKDNTENYDFDIDEISEFDTRKIYIDVELKLAGWDFNK FT DIGEEIELFGMPNNAEKGYADYVLYGDNGKPLAVVEAKKTSKDPKIGREQAKLYADCLE FT KQYDVRPVIFYTNGLETYIWDDYNGYSERRIYGFFKKDELQLMIYRRTQKKTLRNINIK FT DEISNRYYQKEAITACCEELERRKRKLLLVMATGTGKTRTAISLVDVLTRHNWVKNILF FT LADRTALVKQAKKNFSNLLPDLSLCNLLDSKDNPEESRMIFSTYPTMMNAIDDTKAKDG FT KRLFTCGHFDLIIVDESHRSIYKKYKAIFDYFDAYLIGLTATPKDEVDKNTYGIFDMEN FT GVPTYAYEFDKAVEDEFLVEYETIEVKSKIMEDGIKYDELSDEDKEEYEDKFDKDENIG FT EEIYSSAINQWLFNANTIDLVLNKLMENGLKIEGNEKLGKTIIFAKSHKHAEAIKERFD FT ILYPELGSNYAKVIDNQINYVESVIDDFSDKDKLPQIAISVDMLDTGIDIPEILNLVFF FT KKIRSKTKFWQMIGRGTRLCEDLLGVGQDKDKFLIFDFCNNFEFFRMNPKGFKGNLGQT FT LSERIFNLKLDLVKELQDLRYSDEEYVSHRNELLKDLIEDVNNLNEDNFMVKINLKYVE FT KYKNKNEWQSLGAISTQDIKEHISPLISKLKDDEFAKRFDILMYTIELANLQGNNATRP FT IKSVIETAESLSKLGTIPQIQQQKYIIDKVRTTEFWEDVDLFELDEVRSALRELLKYLE FT KITQTTYYTHFEDMIINEESHGAMYNANDLKNYRKKVEYYLKEHENELAIYKLKNNKQL FT TKQDLETLESIMWQELGTKADYEKEFGDMPVNKLVRKMVGLDRNIANELFSEFLNNENL FT NTKQIHFVKLIIDYVVKYGFIDDNKILTEDPFRTVGNISILFKDNRNEVISIISKVAEI FT KNNAEIII" FT misc_feature 780969..781304 FT /note="Pfam match to entry PF04313 HSDR_N, Type I FT restriction enzyme R protein N terminus (HSDR_N), score FT 78.8, E-value 1.1e-20" FT /inference="protein motif:Pfam:PF04313" FT misc_feature 782205..782228 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 782286..782519 FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 10.5, E-value 0.0023" FT /inference="protein motif:Pfam:PF00271" FT CDS 783783..786437 FT /transl_table=11 FT /gene="pcrA" FT /locus_tag="CBO0683" FT /product="ATP-dependent DNA helicase" FT /EC_number="3.6.1.-" FT /db_xref="GOA:A5HZM6" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:A5HZM6" FT /protein_id="CAL82235.1" FT /translation="MHLDVISGLNDAQREAVTTTEGYIRVIAGAGSGKTKALTSRYIYL FT VHELGISTANILCATFTNKAAREMKKRIRTMIGDNDTGLIGTFHGFCRRLLKEDIYTIN FT YPDNFIVMDNEDMDLVLRIVYEDANISSKQFTFSKAKDMISKRKNKDFKYISYIIETDN FT NELKKKFLTSKNVEDRIFYGYLYQQKKNYNLDFNDLIIFTLHILETFPKVRKKWQQKLE FT YIMVDEFQDVNIKQYRLVSILSEYHKNLFVVGDPDQTVYSWRGANVNLILNFDKEFKGT FT KTIMMNQNYRSSSNIIKASNSLISKNKQRIDKELIPIKHGNIPVVYKHSENIYKEANWI FT INQIEQIIKGGNSYKNIAILYRAHYVSRSIEEALLKNKIPYTLYSGVEFYQRKEIKDIL FT SYLRMVVFEDDLSFIRIINEPKRNFGKKRMEIIRKYAEDNNCSLYSSLKINLEDKLIAK FT SKADKFVDLIERYKKIYKEMRITDLLMELLNNSGYEAMLRESGEDERLENLAELKNSIS FT DYENSAGEDTTLEDYLQEISLFTNSDLKENKDTINMMTLHTAKGLEFPYVFICEFNEGI FT FPSARTNTKEKMEEERRLAYVGYTRAKNALFLSDAEGVNYDGSYRFPSRFIFNTGKTYL FT NYLVELKESLIDDANEFISDSENSMNKSNNIKFKIGERIIHKLLGLGVIIGIDNDNSSY FT MIKFDNAETFRNISFSTQLDKADTNNLDIIKSNERKAIDHLEAERLEAERKEQERLEAE FT RLEAERKEQERLEAERLEAERKEQERLEAERLEAERKEQERLEAERLEAERKEQERLEA FT ERLEAERKEQERLEAEQIEVSTMILKIKEEISELEEIVSKNKYKLFGKGAILKKEAKKR FT IQILYLKIDEISN" FT misc_feature 783807..785261 FT /note="Pfam match to entry PF00580 UvrD-helicase, UvrD/REP FT helicase, score 482.9, E-value 2.7e-142" FT /inference="protein motif:Pfam:PF00580" FT misc_feature 783864..783887 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region 785994..786025 FT repeat_region 785994..786173 FT /rpt_unit_seq="(gaacgattagaggcagagagaaaagagcaagaaagattggaag FT ca)4" FT repeat_region 786026..786070 FT repeat_region 786071..786115 FT repeat_region 786116..786160 FT repeat_region 786161..786205 FT repeat_region 786206..786250 FT CDS complement(786602..786718) FT /transl_table=11 FT /locus_tag="CBO0684" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5HZM7" FT /protein_id="CAL82236.1" FT /translation="MSVNMLKYLFKNQVDSNAFWNLIEDYFSGKIPDNIVNG" FT CDS 787005..787826 FT /transl_table=11 FT /locus_tag="CBO0685" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5HZM8" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5HZM8" FT /protein_id="CAL82237.1" FT /translation="MEINLIDLVEHFAHTAFQVEGVYNYSIEPGSAGIMKTSPFPGFIF FT PLAGEANFIFDGTSYTAGIGNVIHGGANMRLSKKVIGKKKWNYILVLYSIRKPEPEGFS FT LEDSHFELVLGQSPRLVDLLQRLWRVSNQPGAIATFQTETIFRCILDEIFIFARNQSSG FT DDRVLFKQVSDYIHEYYMDTLTIRSLAELHGVNENRLFYVFSKYAGMGAGDYLMIHRLN FT RAKELLVTGNAPVVAVAKSVGYHDPYHFSKRFKKQFGISPSKFRDKFRYKG" FT misc_feature 787515..787655 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 17.2, E-value 0.028" FT /inference="protein motif:Pfam:PF00165" FT misc_feature 787554..787619 FT /note="Predicted helix-turn-helix motif with score FT 1531.000, SD 4.40 at aa 184-205, sequence FT LTIRSLAELHGVNENRLFYVFS" FT misc_feature 787662..787790 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature 787671..787805 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 47.0, E-value 4.3e-11" FT /inference="protein motif:Pfam:PF00165" FT CDS 788296..789285 FT /transl_table=11 FT /gene="fhuD2" FT /locus_tag="CBO0686" FT /product="iron-uptake system binding protein" FT /db_xref="GOA:A5HZM9" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:A5HZM9" FT /protein_id="CAL82238.1" FT /translation="MKKFMGLFVSLILIIGVLSGCSGSNNKDTQSKSDNTSAKQTKDNG FT NSQWPRTIKDATGKEIKFDKKPERVVILHAAFLDYFFALETPPAASAGATVGNAMKALD FT EFETLKPYKGTANVMDLGSARDLNLEAVLKSKPDVIVTFKGHADKIYDKLAKIAPVVQI FT DFKDSWQNKTMQCAKIVGKEDLANKIINETEKEIKNTKELLENHKDKTVALLRVDGKGN FT FVALGSKDTLYYNKEDGFNLSIPKDYPEGSKVISLEGLSKMNPDYIIFRHFPEIVNSAV FT EKQKTSPVWQSLNAVKNNQILFFDDSLNSESPLALQISAKNLTKAISK" FT sig_peptide 788296..788386 FT /gene="fhuD2" FT /locus_tag="CBO0686" FT /note="probabilty 0.999, with cleavage site probability FT 0.352 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature 788326..788358 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 788494..789219 FT /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic FT binding protein, score 117.2, E-value 3.2e-32" FT /inference="protein motif:Pfam:PF01497" FT CDS 789381..790421 FT /transl_table=11 FT /gene="fhuB2" FT /locus_tag="CBO0687" FT /product="ferrichrome transport system permease protein" FT /db_xref="GOA:A5HZN0" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5HZN0" FT /protein_id="CAL82239.1" FT /translation="MKKPMEKVNININKKDHIRKMWFIVLGGLGLLAFIMMFSTTKGAE FT NIPLASLWDALFHFNGKEMNHLVIVNLRIPRVIASALVGAALAVSGAIMQGTTGNPLAD FT SGLLGLNAGAAFALSICFAFFPGMKYIHIILFSFLGAAFGAALVNGIASMKRGGQTPIR FT LVLAGAAVSTLLVAMSQGIALYFNVAQSIMFWTVGGVAGSNWEQVRIMLPWIIGGLIGS FT VALSPYISILSLGQDAAKGLGINIKVVNLLSSVIVLILVGASVSVVGSVGFVGLIVPHI FT ARFFVGMDYKLIIPSTAVMGALLVVLADLGARILSPPFETPIGAIISLIGVPLFLNLAR FT RQRSGI" FT sig_peptide 789381..789507 FT /gene="fhuB2" FT /locus_tag="CBO0687" FT /note="probabilty 0.999, with cleavage site probability FT 0.661 between residues 43 and 44" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(789441..789500,789594..789662,789699..789758, FT 789768..789836,789870..789938,790014..790082, FT 790101..790169,790179..790238,790257..790316, FT 790344..790397) FT /note="10 probable transmembrane helices predicted for FT CBO0687 by TMHMM2.0 at aa 21-40, 72-94, 107-126, FT 130-152,164-186, 212-234, 241-263, 267-286, 293-312 and FT 322-339" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 789507..790403 FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 369.4, E-value 4e-108" FT /inference="protein motif:Pfam:PF01032" FT CDS 790421..791461 FT /transl_table=11 FT /gene="fhuG2" FT /locus_tag="CBO0688" FT /product="ferrichrome transport system permease protein" FT /db_xref="GOA:A5HZN1" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5HZN1" FT /protein_id="CAL82240.1" FT /translation="MKEQQQIIEAYKRKIAIRNTLIVIGCILLLVISLIISMDTGYIKM FT SPLDVLRTLFGRGTDKEKLILFDFRLPRIIISMLVGSGLALSGCIIQSISRNPLADPGI FT LGINAGASLMVILYVLIFSAESFLSVFTLPFLALIGAGATAVIVYLFSYKRDEGISTMR FT LVLTGVAVQAGISALTTLLVVKLDDTQYNFVVAWQAGSIWGSNWKFVMTLLPWLAILIP FT YILTKSSVMDILTLSDDIAYGLGASVEKERRKLLAAAVALAASCVAVSGSISFVGLIAP FT HLSRRLVGPRHGVLLSTSILIGAVLVSLADTIGRVIIQPSEIPTGIVVAIIGAPYFLYL FT ISNSKS" FT misc_feature order(790481..790549,790625..790693,790730..790798, FT 790808..790876,790910..790969,791027..791095, FT 791186..791254,791282..791350,791387..791446) FT /note="9 probable transmembrane helices predicted for FT CBO0688 by TMHMM2.0 at aa 21-43, 69-91, 104-126, FT 130-152,164-183, 203-225, 256-278, 288-310 and 323-342" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 790541..791446 FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 436.6, E-value 2.2e-128" FT /inference="protein motif:Pfam:PF01032" FT misc_feature 790559..790588 FT /note="PS00215 Mitochondrial energy transfer proteins FT signature." FT /inference="protein motif:ProSite:PS00215" FT CDS 791689..792474 FT /transl_table=11 FT /gene="fhuC2" FT /locus_tag="CBO0689" FT /product="ferrichrome transport ATP-binding protein" FT /db_xref="GOA:A5HZN2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZN2" FT /protein_id="CAL82241.1" FT /translation="MNSITTTNLVIAYEDKLIVDGLNMNIPKGKITTIIGPNGCGKSTV FT LKTIGRILKPKEGLVYLNGDDIRNLSTKEVAQKMAILPQSPQAQGGLTVGELVSYGRFP FT HKNGFGKLSPEDKKVIEWALDITKLTELEITMVDNLSGGQRQRVWIAMALAQQTDLILL FT DEPTTYLDMAYQLEVLELLYNLNRKQSCTIVMVLHDLNLAARFADYMIAIRDGSIIKCG FT TPKEIMTKEVLKDTFNIDAEIVWGSKTGRPTCISYELIK" FT misc_feature 791773..792336 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 187.5, E-value 2.2e-53" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 791794..791817 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 792106..792150 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 792504..793253 FT /transl_table=11 FT /gene="nifH" FT /locus_tag="CBO0690" FT /product="nitrogenase iron protein" FT /EC_number="1.18.6.1" FT /db_xref="GOA:A5HZN3" FT /db_xref="InterPro:IPR000392" FT /db_xref="UniProtKB/TrEMBL:A5HZN3" FT /protein_id="CAL82242.1" FT /translation="MKKIAIYGKGGIGKSTTVSNVSAAMAEMGLTVMQIGCDPKADSTR FT NLTGGKNIPTVLDTLREKGDIELDDLVFKSSTGVLCVESGGPVPGVGCAGRGIITAFEK FT LEELDAYEIYKPDVILYDVLGDVVCGGFAMPIRGGYADEVCIVTSGEMMSLYAATNIAH FT AVKSFGKRGYASLRGLILNSKKIENEQELVRKVAEEIETPVIHSMERDPYVQKAEALGK FT TVVEAFPECDMAKHYGTLAKILLEGGK" FT misc_feature 792507..793250 FT /note="Pfam match to entry PF00142 fer4_NifH, 4Fe-4S iron FT sulfur cluster binding proteins, NifH/frxC family, score FT 412.3, E-value 4.6e-121" FT /inference="protein motif:Pfam:PF00142" FT misc_feature 792525..792548 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 792750..792788 FT /note="PS00746 NifH/frxC family signature 1." FT /inference="protein motif:ProSite:PS00746" FT misc_feature 792867..792908 FT /note="PS00692 NifH/frxC family signature 2." FT /inference="protein motif:ProSite:PS00692" FT CDS 793256..794524 FT /transl_table=11 FT /gene="nifE1" FT /locus_tag="CBO0691" FT /product="nitrogenase iron-molybdenum cofactor biosynthesis FT protein" FT /db_xref="GOA:A5HZN4" FT /db_xref="InterPro:IPR000510" FT /db_xref="UniProtKB/TrEMBL:A5HZN4" FT /protein_id="CAL82243.1" FT /translation="MEELKHLKHLSSVKTNAGVKFLTPAAFPGNHCPMHTALALSSRVK FT GMSTLVVGTPECGTYSRNIVSGIKSEEGELHWTYILDSNEVVFGCRRGLINTIKEMDKS FT GAKAIMIILTCVPEIIGEDIEGIVHEMQPEVSAQLTFVLMAHFKCNSYPSGYWKTLVAF FT GNLMKKGKKSTDTINILGRSPREKHVPMPGLLTALEKRGFYLRMLAPKSDVEDFIVSPD FT AALNIVLSPFMNPLAEMMWEKFKVPFISLHEIYDVFEVDSLYEDVEKSLKIRFNNEFDE FT SREKAIALQKQAKDVFKGKSYILTHIGAMMPLPLVLYLTKFEMEPVILHMDEFYPDDRK FT WAKAINEKGYDPMICHMVNNDADIELLEGIKADFSLGKLLKDSSLIPCVPYLEDLYGQI FT GYERIAVLLSRMLKVYSKINVKK" FT misc_feature 793325..794506 FT /note="Pfam match to entry PF00148 FT oxidored_nitro,Nitrogenase component 1 type Oxidoreductase, FT score -107.5,E-value 6e-05" FT /inference="protein motif:Pfam:PF00148" FT CDS 794564..795802 FT /transl_table=11 FT /gene="nifE2" FT /locus_tag="CBO0692" FT /product="nitrogenase iron-molybdenum cofactor biosynthesis FT protein NifE" FT /db_xref="GOA:A5HZN5" FT /db_xref="InterPro:IPR000510" FT /db_xref="UniProtKB/TrEMBL:A5HZN5" FT /protein_id="CAL82244.1" FT /translation="MGIHKFKPPMSGRMGVLWTLASIRDAALIEYGCMGHMQYGRMFLN FT QAGISRGCKLYSTHIDETDISLGDTRRLNRTIAQIVERDKPKIIFLLPSSVPTVIGTDL FT VAICEELQPEYPNTFLLPFGCGGFDIDGHRGVKEALLLLAKTLPKGIEKTGEPTFNIIG FT SCADLFRFHADAEEIIRIMKGAFGMEKLCVMTSDTSVEQIENMGGAHINLVIRQEGEPA FT AKQLKERFGTPYLLARPYGIKGTLEWIDKIVKISGLTLDNSFIKSEKEKSMSQISPAIS FT AFQHVIREHPDEARISLGGHRDVVKGILSYAEEELSLIRGTCWCDSEAMASEEIPYFSE FT TEWVQAISSEKKGLLMASGEALKWAKGNIDLQISNPDIKWRLNPYESPFIGFRGAINLV FT NLWLNGLLEQIND" FT misc_feature 794588..795787 FT /note="Pfam match to entry PF00148 FT oxidored_nitro,Nitrogenase component 1 type Oxidoreductase, FT score -40.0,E-value 1.5e-07" FT /inference="protein motif:Pfam:PF00148" FT CDS 796125..798137 FT /transl_table=11 FT /locus_tag="CBO0693" FT /product="methyl-accepting chemotaxis protein" FT /db_xref="GOA:A5HZN6" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR004010" FT /db_xref="InterPro:IPR004089" FT /db_xref="UniProtKB/TrEMBL:A5HZN6" FT /protein_id="CAL82245.1" FT /translation="MKSLKTRLITIFTTIIFVLTVVLGFIVVNRVSKNLTEDYYDDLQN FT LAVEKSNYIKSKIDSEMFYIEAIAQDDKIISKDISWEKKADYFEKEAKRAGYMYYSYVD FT KNGNSTLFNKKRDTVNVKDRDYYKKAMSGKAAISDIIISAVTKKPTIIVASPIIKSGQI FT QGVFYGAKEATFLSDIVSKIEYGKTGFGIIVNDKGTTVGHANKKLVLSQSNTVEIAKKD FT PSFKSLADLIENIISQKKVGNGEYEYKGTKNAVGFSPIEGTNWTMVFGGEISEVLTDVH FT SIRNIIIVLSLMIIVIGALVIYFISGTVVSPIIAVTKRMNELSNLNFTISGNEDAIKYL FT NRKDEIGSMARAVRKMRDNVAEFITKTDESAQQIVATSEELTATSQQSATASEEVAKTI FT EDIAKGSGNQAQDTQNSASSVEEMGSLLEQNKEYVKELNNAAKDIEDRKEEGFSILKEL FT IEKTKENNEAATNIYEIILSNNKSAEKIDSASSMIQSIADQTNLLALNAAIEAARAGEH FT GKGFAVVADEIRKLAEQSNSFTEEIKKVIEELKKKSQNAVDKMEEVKEINQYQSESVKG FT TEEKFKKIAYSIDVTNNVIEKLNKSEEKMNQNKEKLMNLMQNLSAIAEENAAGTEEASA FT SIEEQAASIEEIANSSEGLAHIAEELDSLIKKFKV" FT sig_peptide 796125..796221 FT /locus_tag="CBO0693" FT /note="probabilty 0.999, with cleavage site probability FT 0.494 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 796140..796187 FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT /inference="protein motif:ProSite:PS00038" FT misc_feature order(796152..796220,796986..797054) FT /note="2 probable transmembrane helices predicted for FT CBO0693 by TMHMM2.0 at aa 10-32 and 288-310" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 796533..796772 FT /note="Pfam match to entry PF02743 Cache, Cache FT domain,score 16.4, E-value 0.00026" FT /inference="protein motif:Pfam:PF02743" FT misc_feature 796983..797210 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 49.2, E-value 9.3e-12" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 797271..798134 FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 139.8, E-value 5.3e-39" FT /inference="protein motif:Pfam:PF00015" FT CDS 798189..798353 FT /transl_table=11 FT /locus_tag="CBO0694" FT /product="hypothetical protein" FT /note="Similar to the C-terminal region of Porphyromonas FT gingivalis mate efflux family protein pg1446 SWALL:Q7MUQ1 FT (EMBL:AE017177) (439 aa) fasta scores: E(): 0.22, 43.24 id FT in 37 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZN7" FT /protein_id="CAL82246.1" FT /translation="MTKLLALSRVIYAQPVADIIATLITIPLAIKVKNDLKIKDNYSAM FT KSVEDQKII" FT misc_feature 798216..798284 FT /note="1 probable transmembrane helix predicted for CBO0694 FT by TMHMM2.0 at aa 10-32" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(798433..799842) FT /transl_table=11 FT /locus_tag="CBO0695" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZN8" FT /protein_id="CAL82247.1" FT /translation="MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNL FT EEDEYFKYLEIAKKVLSGTIGNNILELNFPLNENLENEKQLSLVKLKKSQLKDDALLQD FT FYKSIIDSYDYTGNFLILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLSDPG FT LRYFEEEKKIKARIRDWVVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEA FT LGCFSKQTATIQKETFQTIIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDE FT PITLKQKDIQNLLIESGIPEKATAKIEKSYVESFGENLPLAEHLIDSKVLKASAQRKKE FT EQLEKQVEILQYRLEEVKKESAMDKEADVSKKDDEDNVILDDTLEDNLDDALDDVSKND FT LNDSLEDNLEESPAIDSADNNLTPDYDVILQVKPEKIPKIKSQIIDGQKCIVIPIDENE FT QTTVNGLNDLI" FT repeat_region 799964..800008 FT repeat_region 800080..800112 FT /rpt_family="CB.399" FT /rpt_type=INVERTED FT /rpt_unit_seq="acattcaaataaataacaagtcagtatgacagt" FT /inference="ab initio prediction:REPuter" FT CDS 800406..801533 FT /transl_table=11 FT /gene="gcvT" FT /locus_tag="CBO0696" FT /product="aminomethyltransferase" FT /EC_number="2.1.2.10" FT /db_xref="GOA:A5HZN9" FT /db_xref="InterPro:IPR006222" FT /db_xref="InterPro:IPR006223" FT /db_xref="InterPro:IPR013977" FT /db_xref="InterPro:IPR022903" FT /db_xref="UniProtKB/TrEMBL:A5HZN9" FT /protein_id="CAL82248.1" FT /translation="MGVKHMKDLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH FT TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDD FT LLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIVDVSDSIAQLAFQGPLAEEIL FT QKIVDVDLQEIKFFKLKRDVLVNGKKCLVSRTGYTGEDGFEIYCKPEDAKGLWHAILNA FT GKEEGAQPIGLGARDTLRFEASLLLYGNEMDETITPLEVGMGFFAKLKIEEDFIGKDAL FT IKQKAEGVTRKLVGFELLDKGIPRHGYEVIKDGKVIGHVTTGYKSPTLNKAIGLALVEE FT QYSKIGTEFNIKVRKKELKAVAIDKRFYTKKTKTK" FT misc_feature 800562..801515 FT /note="Pfam match to entry PF01571 GCV_T, Glycine cleavage FT T-protein (aminomethyl transferase), score 465.1, E-value FT 5.9e-137" FT /inference="protein motif:Pfam:PF01571" FT CDS 801658..802050 FT /transl_table=11 FT /gene="gcvH" FT /locus_tag="CBO0697" FT /product="glycine cleavage system H protein" FT /db_xref="GOA:A5HZP0" FT /db_xref="InterPro:IPR002930" FT /db_xref="InterPro:IPR003016" FT /db_xref="InterPro:IPR011053" FT /db_xref="InterPro:IPR017453" FT /db_xref="UniProtKB/Swiss-Prot:A5HZP0" FT /protein_id="CAL82249.1" FT /translation="MKVLNNLLYTGDHEWVRVEDNKAYIGISDCAQRMLSDIVFVELPE FT VDDEIAKGETFATIESVKAASDSYMPVSGTIVEINEELEDNPAALNEDPYGSWIAAIEM FT SDKSELEELIKPEVYEKICEELDKEA" FT misc_feature 801676..802035 FT /note="Pfam match to entry PF01597 GCV_H, Glycine cleavage FT H-protein, score 197.8, E-value 1.7e-56" FT /inference="protein motif:Pfam:PF01597" FT CDS 802053..803393 FT /transl_table=11 FT /gene="gcvP" FT /locus_tag="CBO0698" FT /product="glycine cleavage system P protein" FT /EC_number="1.4.4.2" FT /note="Similar to N-terminal region of Escherichia coli FT glycine dehydrogenase [decarboxylating] gcvp or b2903 FT SWALL:GCSP_ECOLI (SWALL:P33195) (956 aa) fasta scores: E(): FT 2.6e-29, 31.39 38d in 446 aa" FT /db_xref="GOA:A5HZP1" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR020580" FT /db_xref="InterPro:IPR020581" FT /db_xref="InterPro:IPR023010" FT /db_xref="UniProtKB/TrEMBL:A5HZP1" FT /protein_id="CAL82250.1" FT /translation="MFPYIPNTEKETKEILDFLSIKSVYELFSDIPDNLKLNRELDLES FT SLSELEVEKRLKALALKNKSMEDMTCFLGAGIYDHYIPSVIKHITGRSEFYTAYTPYQP FT EVSQGTLQAIFEYQSMICALTGMEVSNSSMYDGATATAEAAILSIVSTKRNTIIVSKSV FT NLDTRKVLKTYLKYRGYNMVEVDLEDGTTDVDKVINSLDKNVAAVIIQSPNFLGLVEDV FT ENMVDAIHKNKSLLIMNVDPISLGILKSPGELGADIVVGDGQCLGANMSYGGPGFGFMN FT TTKKLMRKMPGRIVGETEDVEGKRGFVLTLQAREQHIRREKATSNICSDQTAVAIGAAV FT YMATLGKEGIKEVAKQCVAKSHYAYNELIKSGKYKPAFNKPFFKEFVVKGETSPCEIND FT KLLENNILGGYDLGKVYSEYENSMLLCVTEKRTREDIDNLVKVMEAI" FT misc_feature 802062..803381 FT /note="Pfam match to entry PF02347 GDC-P, Glycine cleavage FT system P-protein, score 577.9, E-value 6.7e-171" FT /inference="protein motif:Pfam:PF02347" FT CDS 803393..804847 FT /transl_table=11 FT /gene="gcvP'" FT /locus_tag="CBO0699" FT /product="glycine cleavage system P protein" FT /EC_number="1.4.4.2" FT /note="Similar to the C-terminal region of Escherichia coli FT glycine dehydrogenase [decarboxylating] gcvp or b2903 FT SWALL:GCSP_ECOLI (SWALL:P33195) (956 aa) fasta scores: E(): FT 2.9e-57, 40.12 38d in 481 aa" FT /db_xref="GOA:A5HZP2" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR020580" FT /db_xref="InterPro:IPR020581" FT /db_xref="InterPro:IPR023012" FT /db_xref="UniProtKB/TrEMBL:A5HZP2" FT /protein_id="CAL82251.1" FT /translation="MKDYNKVIFELSSEGRKGYRLPNLDVPEVELSELLPKNLLREDEI FT ELPEVSEVDVVRHYTALSNKNYTVDNGFYPLGSCTMKYNPKINEDIVALSGFSKIHPLQ FT DENISQGALELMYDLKGKLCEITGLDDFTLQPAAGAHGEYTGLLIIKAYHEKRGDTKRT FT KIIVPDSAHGTNPASASVAGFDIVEIKSGEDGRVSIEELKKVLNDEIAGLMLTNPSTLG FT LFEKDIKLISELVHEAGGLLYYDGANLNAIMGIARPGDMGFDVCHLNMHKTFSTPHGGG FT GPGSGPVGVKKHLAKFLPVPTVEKENDKFILDYNRPDSLGKIRSLYGNFGVMVKAYTYI FT LTMGKEGLKSASHNAVLNANYIKESLRDYYNIGKDDICKHEVILSTLKENPHHIATLDI FT AKRLIDYGVHPPTVYFPLIIEEALMIEPTESESKETVDEFIDAMKKIAVEAKENPELLH FT EAPVKAPVRRLDQVKAARKPILRWQK" FT misc_feature 803429..804721 FT /note="Pfam match to entry PF02347 GDC-P, Glycine cleavage FT system P-protein, score -284.1, E-value 0.00058" FT /inference="protein motif:Pfam:PF02347" FT CDS 805041..806429 FT /transl_table=11 FT /gene="pdhD1" FT /locus_tag="CBO0700" FT /product="dihydrolipoyl dehydrogenase (E3 component of FT pyruvate complex)" FT /EC_number="1.8.1.4" FT /db_xref="GOA:A5HZP3" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006258" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:A5HZP3" FT /protein_id="CAL82252.1" FT /translation="MKDIIVIGGGPGGYVAAIRAAHLGADVAVVEMDSFGGTCLNKGCI FT PTKTLYRTAEMMNILKHIEDFGIEAENYNLNVEKVQERKNNVIKELVGGVEKLLKGNNV FT EIIKGKAFLKDKNTVLVETKDGQVTLEGKNIIIATGSNAEMPDIKGIKNKNIIISDDIL FT EFDRIPRHLVVSGGGVVGMEFANIFKAMGSEVTVIVARDSILYDIDREISKRYKVIAKK FT SGINILTSTKILEFAQDDNNVTIKCESKKGEFELNSDMVLMAKGRRGNFTGMNLEELGI FT EHDKKKIIVDDNYKTNIDGIYAIGDVNGICLLAHAASHQGIEVVEHIMENKECHKSVIP FT NCIFTFPEIATVGMTEEEIKEKGIEYIKNKFLFGANGKALALGEGEGVVKVICEKESKK FT ILGIHIMGPHASDLIHEGVVAIEKGMTVNDFKEVVHAHPTLGEAFYEAIMGLNKEAIHS FT INKK" FT misc_feature 805047..805988 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 272.7, E-value FT 5e-79" FT /inference="protein motif:Pfam:PF00070" FT misc_feature 805146..805178 FT /note="PS00076 Pyridine nucleotide-disulphide FT oxidoreductases class-I active site." FT /inference="protein motif:ProSite:PS00076" FT misc_feature 806055..806384 FT /note="Pfam match to entry PF02852 pyr_redox_dim, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation FT domain,score 176.2, E-value 5.5e-50" FT /inference="protein motif:Pfam:PF02852" FT CDS 806447..807424 FT /transl_table=11 FT /gene="lplA1" FT /locus_tag="CBO0701" FT /product="lipoate-protein ligase A" FT /EC_number="6.-.-.-" FT /db_xref="GOA:A5HZP4" FT /db_xref="InterPro:IPR004143" FT /db_xref="InterPro:IPR004562" FT /db_xref="InterPro:IPR005107" FT /db_xref="InterPro:IPR019491" FT /db_xref="UniProtKB/TrEMBL:A5HZP4" FT /protein_id="CAL82253.1" FT /translation="MKYIDNSNIDPYFNLAAEEYFLRHKDDEYFILWRDEPCVVVGKNQ FT NTLSEIDMDYIETNKVKVVRRQTGGGAVFHDLGNLNYTFIVKDDGKSFNDFERFCKPII FT GVLKTLGVKAEFSGRNDLLIDGKKISGTAQCKYKNRVMHHGTLLFSSDIINLSGALKPK FT KIKFQDKAVKSVVSRITNISEHLNSEIDVLTFKNKIFDYILKSEKDAKVMPLTQDEIDE FT IEKIKKSKYETWAWNFGSSPKYDFYNEGKFTGGTIELNLKVEKGVIKDIKIFGDFFGVK FT DIKEIEDLLKGTEHKKEEIKNVIKNVNVDEYFARITAEEFLSLF" FT misc_feature 806555..806911 FT /note="Pfam match to entry PF03099 FT BPL_LipA_LipB,Biotin/lipoate A/B protein ligase family, FT score 127.8,E-value 2.1e-35" FT /inference="protein motif:Pfam:PF03099" FT CDS 807834..809927 FT /transl_table=11 FT /locus_tag="CBO0702" FT /product="hypothetical protein" FT /note="Weakly similar to N-terminal region of Spiroplasma FT citri chromosomal replication initiator protein DnaA dnaA FT SWALL:DNAA_SPICI (SWALL:P34028) (450 aa) fasta scores: E(): FT 7.2, 21.14 38d in 350 aa, and to the entire length of FT Plasmodium yoelii yoelii arabidopsis thaliana brahma FT ortholog py06648 SWALL:EAA18896 (EMBL:AABL01002276) (632 FT aa) fasta scores: E(): 2.1, 21.99 38d in 623 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZP5" FT /protein_id="CAL82254.1" FT /translation="MGIQPTNAGIDFQQRVSAWFIICMLFEVDIENVLNLNINSSIKDI FT TFESNDKIDDLVITSNNNKKIYMQMKRTINLSENEGSEFYSVCQQFVNQYLQNDIDDFA FT YILVTSKNSSNNISETLRRLLEGIRISNSFSITKEFNKNEQDVFRKIDRVIKQIYLDST FT GKEIAEKILLEILRRTYVEIFDIENGQSYEKVVKLYLYNKINVDVNLFWSFMIKMALQL FT ASARQTLNKKYLDKKFEDYLKKHKESNGNNELISIIGQFDSLEVRKDYILVLQNQQIDL FT LFNLKNEIQDSNKLYLIELFRFNEVGKKELRYEEPYFLTLTNGIKLELVYRSATAKGIE FT RFISSKEYKDRFEEYDVVYIGSNDSDDENQFEKIHNDLLLKYLNEKSNCLCSNCGKAIF FT QEDSLLIEIDNDNCEADIGIIHKECLIPVNRVLGIAKMPSDREYKFLKNFDINLWIKQI FT KDGQFCYNGAKILNQSVNPLVVETDTNNLVLGSYCVKTLLEDGTYKFATRRGNIDRYSK FT KDAEDFVNELNEKIKTGQIEKNPICYSSKSFIFGNYTTLVSQLGGTEEYIECKKSEVVK FT YNESIAKLHNKCKNFYTPLIYLVIDEKPLIVNDMFPLFTNPLELNGYLDNFEKVNIKIK FT EYQVAIIRDDKEFCLTIMNLMNQGIRPIIDIKFGKNNEIIQGYVVHTMYEMMLIHEMKM FT QKN" FT CDS 810289..811125 FT /transl_table=11 FT /locus_tag="CBO0703" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5HZP6" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR010499" FT /db_xref="InterPro:IPR011256" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:A5HZP6" FT /protein_id="CAL82255.1" FT /translation="MIIKKSLINKSIEYILQHIHEDISIEDVANYCNFSKYYFSRMFKE FT ETEVSIYAFIKRMRMDQSSVSLKVEKDKTITDIGVNYGYSSSNYSSAFSKQYSICPLEF FT RKAINSTCVSNPFCPSKYNTFKSFEHYNKKIIIENLADFKVIYERYIGNYIDIGDNWYS FT FMERYKTYIKPDTLLIEKSYDDPSITELEKCIYDLCITVGEDVELENVTTIKGGKFAVY FT RFNGYIHDIFVTFQGVFNIWLPRSGYKMDERYGLGIYHNIDRKNNHVTMDLCIAIK" FT misc_feature 810316..810456 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 48.0, E-value 2.1e-11" FT /inference="protein motif:Pfam:PF00165" FT misc_feature 810355..810420 FT /note="Predicted helix-turn-helix motif with score FT 1422.000, SD 4.03 at aa 23-44, sequence FT ISIEDVANYCNFSKYYFSRMFK" FT misc_feature 810478..810606 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 19.7, E-value 0.0073" FT /inference="protein motif:Pfam:PF00165" FT CDS 811219..811767 FT /transl_table=11 FT /locus_tag="CBO0704" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZP7" FT /protein_id="CAL82256.1" FT /translation="MFDIRKIQEQVIYEAVKNESNEDIAREVVYGKEENGKSEDNAIWV FT NSTMKRLESKFDKTTTKKIRMKCQCGYGMDKKLELVKELIELSSSLEELGNLQKAKDAG FT LFYENGDLYLQFNFCPCPMLADVDRLDSDVWCQCTTGYSKVLFEKAFQCKVNVELLRSI FT KMGNERCLMKIIPQGVIWK" FT misc_feature 811309..811332 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 811969..812133 FT /transl_table=11 FT /locus_tag="CBO0705" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium acetobutylicum hypothetical FT protein Cac1490 cac1490 SWALL:Q97IZ6 (EMBL:AE007660) (57 FT aa) fasta scores: E(): 1.5e-07, 56.25 38d in 48 aa, and to FT the C-terminal region of Lumpy skin disease virus early FT transcription factor small subunit lw017 SWALL:Q91T35 FT (EMBL:AF336128) (176 aa) fasta scores: E(): 8.5, 25.8 38d FT in 62 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZP8" FT /protein_id="CAL82257.1" FT /translation="MENEDINLYDIFTTYSYNDIMKLLQSSKSKEEQDFYANLSNIILQ FT REQMKVIGK" FT CDS 812843..813607 FT /transl_table=11 FT /locus_tag="CBO0706" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZP9" FT /protein_id="CAL82258.1" FT /translation="MSIEVNPAERLHEILSNAKNNSNSSNNYGNNNSVQKAWALTFGID FT ENDEEKVFMAVVQVIQQIEALKKVANRMNSNLKNDFVKQITELEREIMNLKLSEDSYNL FT SNIINEKKIFSLKAIGMGLDIYNEYSTIEDEQMHDIREKILQLINEINDLSINDDLKKV FT VIGNLSSVDLMIENHKLYGVDGIKEAVEKGFGNIMLNNELSELSKSDTTVKETLKKVLN FT LFGSINTVLTFSKNMTPMLKEATEIAKNFFFN" FT CDS 813661..814119 FT /transl_table=11 FT /locus_tag="CBO0707" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZQ0" FT /protein_id="CAL82259.1" FT /translation="MVARIGPWQDNNIQIKCAREAVKLIKKYIIEGISFNQETTLSGKS FT IISNTKLAKEKGFYVTMNYIGVESVDIAKERVAIRVSKGGHGIPDEAIERRYDDSLANL FT NKVISMCDKINIYDNTEMFKLVMAVNNGEIIWKDRNSPSWLNMDLNDE" FT CDS 814445..815209 FT /transl_table=11 FT /locus_tag="CBO0708" FT /product="MerR-family transcriptional regulator" FT /db_xref="GOA:A5HZQ1" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="UniProtKB/TrEMBL:A5HZQ1" FT /protein_id="CAL82260.1" FT /translation="MGKIYKTAEVAKIVGVHPNTVRLYEKLKLVPKVNRLPNGYRVFTN FT YHIEQFKLARTAFKVEVLQNGLRKKIINVVKLSAKGEFQEAINCTNDYINQIKQERKNA FT EEAIELSKKLLLEIDAKDNYIFFTRKQTSDYLQVTMDTLRNWEMNGLLTVKRKQNGYRV FT YTESDINRLKIIRTLRCANYSLSAILRMLNAISESKEIDIREVIDKAKEDEDIITACDK FT LLTSLSDAEKNANSILKQLEFMKNQFNTNSTL" FT misc_feature 814457..814522 FT /note="Predicted helix-turn-helix motif with score FT 1712.000, SD 5.02 at aa 5-26, sequence FT YKTAEVAKIVGVHPNTVRLYEK" FT misc_feature 814460..814573 FT /note="Pfam match to entry PF00376 merR, MerR family FT regulatory protein, score 29.2, E-value 1e-05" FT /inference="protein motif:Pfam:PF00376" FT misc_feature 814522..814823 FT /note="Predicted helix-turn-helix motif with score FT 1712.000, SD 5.02 at aa 127-26, sequence FT KLKLVPKVNRLPNGYRVFTNYHIEQFKLARTAFKVEVLQNGLRKKIINVVKLSAKGE FT FQEAINCTNDYINQIKQERKNAEEAIELSKKLLLEIDAKDNYIFF" FT misc_feature 814823..814888 FT /note="Predicted helix-turn-helix motif with score FT 1396.000, SD 3.94 at aa 127-148, sequence FT FTRKQTSDYLQVTMDTLRNWEM" FT CDS 815261..815992 FT /transl_table=11 FT /locus_tag="CBO0709" FT /product="putative drug resistance ABC FT transporter,ATP-binding protein" FT /db_xref="GOA:A5HZQ2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZQ2" FT /protein_id="CAL82261.1" FT /translation="MEVIKVNNLYKSYGNVQVVKNISLTVNKGEVFGLLGANGAGKSTT FT IDCILGTKNFDDGEVSILGMNPKKERKRLFQKVGVQFQESNYQDKITVKELCEITEVLY FT KNPLDFNKLLEQFDLQDKVRNLVSELSGGEKQRLFIILALIPNPEVVFLDELTTGLDVK FT ARRDVWKCLLNLKKQGLTIFLTSHFMDEVEVLCDKICILKNGVIDFCGTVEEAVTLSPY FT EKFEDAYLWFVDEEELNDESI" FT misc_feature 815345..815875 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 132.3, E-value 9.1e-37" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 815366..815389 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 815648..815692 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 815976..816722 FT /transl_table=11 FT /locus_tag="CBO0710" FT /product="putative drug resistance ABC-transporter,membrane FT protein" FT /db_xref="GOA:A5HZQ3" FT /db_xref="InterPro:IPR000412" FT /db_xref="InterPro:IPR013525" FT /db_xref="InterPro:IPR013526" FT /db_xref="UniProtKB/TrEMBL:A5HZQ3" FT /protein_id="CAL82262.1" FT /translation="MMKVFKTMLKTELKLSLRGMDMFIFAICMPVLVTVILGVIYGNKP FT AFPGANFTFMEQSFAAVSTIAICAGGVMGLPLVLSEYRHRKILKRFRVTPVSPSMILVV FT QGVIYALYAIVSLILVYLTAKIFFKFQFRGSWINFLGAYTLVMASMFSIGFMVGGIAKN FT IKMAGVIASILYFPMLIFSGATLPYEVMPTALQKVADILPLTHGIKLLKSASLNLSMDN FT AIIPILVVSILAVICIGVSIKLFRWE" FT sig_peptide 815976..816153 FT /locus_tag="CBO0710" FT /note="probabilty 1.000, with cleavage site probability FT 0.989 between residues 60 and 61" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(816042..816101,816144..816212,816273..816341, FT 816384..816452,816471..816539,816642..816710) FT /note="6 probable transmembrane helices predicted for FT CBO0710 by TMHMM2.0 at aa 23-42, 57-79, 100-122, FT 137-159,166-188 and 223-245" FT /inference="protein motif:TMHMM:2.0" FT CDS 816930..819167 FT /transl_table=11 FT /locus_tag="CBO0711" FT /product="putative drug resistance ABC transporter" FT /db_xref="GOA:A5HZQ4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZQ4" FT /protein_id="CAL82263.1" FT /translation="MEQEFIVLKGCKENNLKDISLNIPKRKITIFTGVSGSGKSSIVFE FT TVAKEAQRQLNETFTAFIRNFLPKYGEVKADHIENLSTPIIIDQSRLGGNSRSTLGTIT FT DINSFLRALYSRFGSNYIGKANMFSFNDINGMCPECQGLGKKLVPNMEEIFDKSKSLNE FT GAILLSGFGVGSWHWKIFAQSGYFDNDKKICDYSEEELDKFLYGGPDKIKIDETGGMNI FT TYEGLLVKFNRLYLKKEGETSEAAKKKLNKLLIEDQCPACGGKRLHQRVYGSLINGYNI FT ADLTSMQIDELVEVVKEINDPEAEPLVKGIIEKLNNIIDIGLGYLTLDRETSSLSGGES FT QRIKMVKHLNSNLVDLMYIFDEPSIGLHPRDVHKLNNLLKKLRDKGNTVIVVEHDPDVI FT KIADHIIDVGPKAGKYGGEIVYEGTYENLLKSGTLTGNALNKSLSIKEKVRDHKGYLKV FT VNCNKNNLKNISVTIPKGVLTVVTGVAGSGKSTLIKHEFLKQNKNAVLIDQSPVSANSR FT SSLATYSGIMDNIRKAFAKANGVNASLFSSNSKGACENCNGSGIIETNLAFMENIKSTC FT DVCEGKKYKKEVLDYKLHGENIIEVLEMSVSDAIEFFNLRSVKAKLQSIEDMGIGYLTL FT GQTLDTLSGGECQRLKLASELHNESSIYILDEPTTGLHIADIEKFINIVENIVDSGNTV FT IIIEHNVDIIKRADWIIDMGPDGGTKGGEIIFEGTPKQLHNCQVSLTAKYI" FT misc_feature 817005..818156 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 38.4, E-value 5.2e-09" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 817026..817049 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 818355..819071 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 80.5, E-value 3.5e-21" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 818376..818399 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 818853..818897 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 819361..821619 FT /transl_table=11 FT /locus_tag="CBO0712" FT /product="putative helicase" FT /db_xref="GOA:A5HZQ5" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR014016" FT /db_xref="UniProtKB/TrEMBL:A5HZQ5" FT /protein_id="CAL82264.1" FT /translation="MKDFEWKLEKEWLQEVFQEVRKQYNEKHDLKEKFKKDAIETQREL FT WNDVGSVSIANGLDQVVDFIGFINTMKIQKRSHEFTKKLEEKYERMLLSPYFGRMDFIE FT NGEEKVEKYYIGISNLINDNYDFLVYDWRAPVSSMFYDYEIGEANYKCPEGRVNGKLTL FT KRQYKINNGEIKYMFDSNLKIDDEVLQDILGKSTDSKMNAIVTTIQREQNKVIRNEDYK FT NLIVQGPAGSGKTSVALHRIAYLLYKHRDKISPKNIVIFSPNDILNDYISNVLPQLGED FT NMCQTTFKEYMHKALGNRLIKENYSEMMEYILVSKKDGAYEKRINNIKFKSSMEFMDIL FT KAYVGYLEKMDRNFTDITFRGDLIISSKDIEELFFEDYVKLPIKRRLQKIRRRILFLME FT PYEKHWVKEEAEELKNSGNYIDNVEITERSINIVKDEIKDIYHEINRMTDFDLVDVYKK FT LFENLEFFLKKSNTEYHEKNIDEMKSYTLEALRIGKLNYEDQPPLLYLKGALGDLPKNS FT EIKYVIIDEAQDYTPLQYEIFSQLFNHANMTILGDLHQSINPFMNVGDYSNISNVFPKD FT NTCIINLTKSYRSTMEITEFSRRILNKKITDQWVERSGDKPLVLGFADEEAIKERLLKD FT IKIYKEKGYKSIGIITRTIKEAQEVHSFLKDKIHVKAIMKDDDEYVSDTLVIPAYLAKG FT LEFDVVLIYNAGDGNYSCQEERLLLYTACTRALHLLCIYYSGKVTPLLVGSIEFSTLK" FT misc_feature 819982..820143 FT /note="Pfam match to entry PF00580 UvrD-helicase, UvrD/REP FT helicase, score 7.1, E-value 0.043" FT /inference="protein motif:Pfam:PF00580" FT misc_feature 820042..820065 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 820909..821031 FT /note="Pfam match to entry PF00580 UvrD-helicase, UvrD/REP FT helicase, score 16.6, E-value 0.0001" FT /inference="protein motif:Pfam:PF00580" FT CDS complement(821889..822596) FT /transl_table=11 FT /locus_tag="CBO0713" FT /product="conserved hypothetical protein" FT /note="Also similar to CBO2045 (67.1 38d)" FT /db_xref="InterPro:IPR011101" FT /db_xref="UniProtKB/TrEMBL:A5HZQ6" FT /protein_id="CAL82265.1" FT /translation="MAMWNPWRGCHKYSEGCKYCYIHKGDTKRGVDTNIIVKTDNFNAP FT IAKNKKGEYKIKSGQTVYLCFSTDFLIEEADKWREECWKMIRERSDLNFIFLTKRIERF FT LECIPNDWNNGYDNVTVGCTVENQDRADFRLSIFQSLPIKHRNVICQPLIEEINIEKYL FT DNVELVVVGGESDRNARPLNYNWVLSIREQCITKGVPFEFRQCGTHFIKDGKKYTLNVK FT DLCSQARKANINC" FT CDS complement(822679..823533) FT /transl_table=11 FT /locus_tag="CBO0714" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5HZQ7" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR010499" FT /db_xref="InterPro:IPR011256" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:A5HZQ7" FT /protein_id="CAL82266.1" FT /translation="MEWIERLNSAVNYIEKNIKETIDLEEVSKIACCSTYHFQRMFAYI FT ADIPLSEYIRRRRMSLAAVDLQSSNEKVIDISLKYGYDSPTAFNRAFKSVHGIAPSRAK FT EEGTILKAFPPISFKITIKGDSEMNYRIEKKESFRIVGVSEPLEKEIEKNFQIVPKMWN FT TAVMNGTIPRLASIMEGMPMGMLGVSSCNELDNWRYYIAVASNQPIGNGLEEYIVPSSL FT WAIFSGKGTAKSMQELEKRILTEWLPTSGYEYGNAPDIEVYLKADPEDTEYEVWIPVLK FT KEN" FT misc_feature complement(822961..822993) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature complement(823219..823353) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 28.9, E-value 1.3e-05" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(823234..823362) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature complement(823369..823509) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 27.1, E-value 4.4e-05" FT /inference="protein motif:Pfam:PF00165" FT CDS complement(824025..824906) FT /transl_table=11 FT /locus_tag="CBO0715" FT /product="putative membrane protein" FT /db_xref="GOA:A5HZQ8" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:A5HZQ8" FT /protein_id="CAL82267.1" FT /translation="MKIARIQFLLSMLIVGSIGLFVRSIPFSSAQIALVRGILGCAFVL FT VFSLMSGQKISGKNIKANLWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLV FT MILSPLILKEPLSVLKVLCIVAALVGLTCIAGVSKKAGANDFVGILYGLGSAVLYATVI FT FLNKCLKDIKGIESSIVQLGVSAISLLAYVLMSEGFKLDEMTVTPIVLLLIVGVIHTGV FT VYLLYFSSMRELSAQSVAALSYIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNE FT IYAQKKKTSNIL" FT misc_feature complement(order(824055..824123,824133..824192, FT 824226..824294,824322..824375,824412..824465, FT 824493..824561,824574..824642,824655..824723, FT 824760..824813,824826..824894)) FT /note="10 probable transmembrane helices predicted for FT CBO0715 by TMHMM2.0 at aa 5-27, 32-49, 62-84, FT 89-111,116-138, 148-165, 178-195, 205-227, 239-258 and FT 262-284" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(824061..824438) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 81.5, E-value 1.8e-21" FT /inference="protein motif:Pfam:PF00892" FT misc_feature complement(824499..824882) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 52.9, E-value 7.3e-13" FT /inference="protein motif:Pfam:PF00892" FT sig_peptide complement(824813..824906) FT /locus_tag="CBO0715" FT /note="probabilty 0.999, with cleavage site probability FT 0.492 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS 825034..825369 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0715A" FT /product="putative transcriptional regulator (partial)" FT /note="Partial CDS. Similar to the C-terminal region of FT Clostridium tetani putative transcriptional regulatory FT protein ctc01439 SWALL:Q894U5 (EMBL:AE015941) (235 aa) FT fasta scores: E(): 2.1e-12, 41.81 38d in 110 aa" FT /note="was marked partial" FT CDS 825962..826222 FT /transl_table=11 FT /locus_tag="CBO0716" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007077" FT /db_xref="UniProtKB/TrEMBL:A5HZQ9" FT /protein_id="CAL82269.1" FT /translation="MGELLKLPNIGKEVESQLNKVGIFSYDELKDIGTEQAWLKIQEID FT SSACIHRLLALEGAIQGVKKTALPQERKAELKDFYNWHKCK" FT misc_feature 825968..826201 FT /note="Pfam match to entry PF04994 TfoX_C, TfoX C-terminal FT domain, score 40.9, E-value 2.9e-09" FT /inference="protein motif:Pfam:PF04994" FT CDS 826248..826742 FT /transl_table=11 FT /locus_tag="CBO0717" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5HZR0" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5HZR0" FT /protein_id="CAL82270.1" FT /translation="MIIQTERLDLIPLTPNQLKLWIEDIPELEKELDCSYKAEPMKGFF FT IEIVKGQYEITRKDPNNYLWHSFFFLIRKEDRVVVGSADFKNIPNEKGEVEIGYGLGKE FT FEHNGYMTEAVKAMCEWALKQKGVRNVIAETDLAGFASQRILECCGFKKYKQEETIWWR FT L" FT misc_feature 826458..826703 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 39.7, FT E-value 6.9e-09" FT /inference="protein motif:Pfam:PF00583" FT CDS complement(826921..827919) FT /transl_table=11 FT /locus_tag="CBO0718" FT /product="putative 3-oxoacyl-[acyl-carrier-protein] FT synthase" FT /EC_number="2.3.1.41" FT /db_xref="GOA:A5HZR1" FT /db_xref="InterPro:IPR013747" FT /db_xref="InterPro:IPR013751" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="UniProtKB/TrEMBL:A5HZR1" FT /protein_id="CAL82271.1" FT /translation="MSIKIKNIEYYHPKTSYSNEYFLKHFSEQDIDISGLLNVTGRNKR FT YVSEDFNENSLTMAIEACKKVIRTANIDVQDINLVVFVSSTPEYLSPTNAVKVHDALGL FT SKNTNAYDMNGNCAGMIIAMDQVCRTMKSNNRIKYSLLVGSDLVIRYSRKSEPITYANF FT GESACAVLLENTDDNISDFIDSSSYVDSSLSCYIKFPPDGFSKVLPIDEDTPKDNRIIE FT WMDFNTDEAFASSVDSINEILDRNNLTKDDVKLYCLSQFAKKNIDMIREILEEPDYKFP FT FVGDRFGYTGVTSPFLALADSVSNGNLKPGDYVILWTVGAGVVASCILLRY" FT misc_feature complement(826930..826983) FT /note="1 probable transmembrane helix predicted for CBO0718 FT by TMHMM2.0 at aa 313-330" FT /inference="protein motif:TMHMM:2.0" FT CDS 828168..829634 FT /transl_table=11 FT /locus_tag="CBO0719" FT /product="methyl-accepting chemotaxis protein" FT /db_xref="GOA:A5HZR2" FT /db_xref="InterPro:IPR004089" FT /db_xref="UniProtKB/TrEMBL:A5HZR2" FT /protein_id="CAL82272.1" FT /translation="MDYKKNAELKNKIMLAGFIASVVLRAIFDIILKVDRNAILILVGL FT SIPLAIIDFILIKKKCIIQTMYYTVIMYTAVICIMFISDPNWANFILIYYGVILMSVYQ FT DLKILIIEAILAIILVVYFFLGHKTTLFASVEYYELVFYIAYIVAGTAILSINAITTKS FT IYKDLEETHKATEEAKSRAELLLGKIYSTIKVLTATNEKIKSGISVAGQIAEEITSSTS FT DVANSATKEVDVMIGMKASIEGGAEKVEEVTNCIKTMEELSKSTENVVLEGNNKVDILY FT SEMNKVNKNILSVVSMINELSDENAKIVHIINSITKISEQTNLLALNASIEAARAGEYG FT KSFAVVAEEVRKLAEDSKESTDQIELILNNISSKTKVVAEEILKEEKSIELCNEHTNDV FT KELFKDVNKNTSNVLSYSSSVGSQSILLESTMKNTLSSVNNISETVESTATAMEEIFTA FT IDELNNSIIGITSSYDEIDDICNELNSISE" FT misc_feature order(828204..828263,828276..828335,828393..828461, FT 828489..828542,828576..828644) FT /note="5 probable transmembrane helices predicted for FT CBO0719 by TMHMM2.0 at aa 13-32, 37-56, 76-98, 108-125 and FT 137-159" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 828780..829625 FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 82.6, E-value 8.3e-22" FT /inference="protein motif:Pfam:PF00015" FT repeat_region complement(829646..829779) FT /note="intergenic repeat 1" FT CDS 830142..830417 FT /transl_table=11 FT /locus_tag="CBO0720" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR014875" FT /db_xref="UniProtKB/TrEMBL:A5HZR3" FT /protein_id="CAL82273.1" FT /translation="MKYEKAQNILPDGIIEMIQNYIDGGYIYIPKKNENKKSWGENTET FT KRYLKVRDKEIFNKYSSGASVKTLAEEYFLTEGSIRRIIRNQKSYG" FT misc_feature 830331..830396 FT /note="Predicted helix-turn-helix motif with score FT 1140.000, SD 3.07 at aa 69-90, sequence FT ASVKTLAEEYFLTEGSIRRIIR" FT CDS 830616..832169 FT /transl_table=11 FT /locus_tag="CBO0721" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZR4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZR4" FT /protein_id="CAL82274.1" FT /translation="MSILTVESMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTF FT MKIITNEILVDEGTIDWNSKFSIGYMDQLVELKEGITVFNFLKKAFIKLFDIENKINDL FT YNNLGNMDKARMDKTLNQIATMQEILEKNDFYSINSKIQATVVGLGIKGLLDRDVSALS FT GGQRTKILLAKLLLEKPDILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNSFLN FT SVVNVIYHLEHKTLTRYAGNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKAR FT ASTAKQAKSREKKLDKIEKIEIKKEIIKPYFNFKSVRMPENIIFNASNLIIGYNKPLSK FT PLNLKMKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIMEDN FT AGSVLYDVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPS FT NVLVLDEPTNHLDIYAKNELKHALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRCCSV FT " FT misc_feature 830700..831317 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 125.4, E-value 1.1e-34" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 830721..830744 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 831099..831143 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature 831660..832151 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 114.6, E-value 2e-31" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 831681..831704 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 831933..831977 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 832283..832417 FT /transl_table=11 FT /locus_tag="CBO0722" FT /product="hypothetical protein" FT /note="Similar to C-terminal region of Bacillus subtilis FT transcription regulator yobV SWALL:O34920 (EMBL:AF027868) FT (313 aa) fasta scores: E(): 6.4, 44.44 38d in 36 aa" FT /db_xref="UniProtKB/TrEMBL:A5HZR5" FT /protein_id="CAL82275.1" FT /translation="MKSKIRYLLGFGEKIKVLSPLSYQQRVKEHLRNTLIKNYENSDI" FT CDS 832471..833097 FT /transl_table=11 FT /locus_tag="CBO0723" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:A5HZR6" FT /protein_id="CAL82276.1" FT /translation="MKKIIYLYILESMAEWEVGYILQAISMESMLKRQNREFVVKTVST FT SKNPIKTIGGLTITPDCLLDEIDENNMVALLLPGAESWNSEENNQILEKALLYIDKGIL FT VGAICGATLALADLKVLDKFKHTSNSLDYLTLFSKQYSGKELYVNSPAVVDCNLITASS FT AGGLLWAKRIIQYLNVFPCDIIESWYNYYSTGDPKHFTELISQSI" FT misc_feature 832585..833004 FT /note="Pfam match to entry PF01965 DJ-1_PfpI, DJ-1/PfpI FT family, score 31.1, E-value 8.8e-07" FT /inference="protein motif:Pfam:PF01965" FT CDS complement(833324..834232) FT /transl_table=11 FT /gene="cysK" FT /locus_tag="CBO0724" FT /product="cysteine synthase" FT /EC_number="2.5.1.47" FT /db_xref="GOA:A5HZR7" FT /db_xref="InterPro:IPR001216" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR005856" FT /db_xref="InterPro:IPR005859" FT /db_xref="UniProtKB/TrEMBL:A5HZR7" FT /protein_id="CAL82277.1" FT /translation="MKYLDSIKELIGNTPILKLNNLNIKPGVNVFVKLETNNPGGSVKD FT RIGIYMIEQAEKEGKLKKGYTIVEATAGNTGIGVALAAINKGYDVIFVVPEKFSVEKQT FT LMRALGAKIINIPKKDGMLGAVAKANELLETIENSISLKQFENEANPLAHYKTTGPEIY FT EDMDGKIDYFISGAGSGGTFTGVMKFLKEKDENIKGILADPKGSTMGGGEKESYDIEGI FT GNDFIPDTMDMDLVDKVIKVNDEEAYEMVKLLALKEGLIVGSSSGAAVSAALKLAEKID FT KGNIVTILPDRGDRYFSKNIY" FT misc_feature complement(833357..834214) FT /note="Pfam match to entry PF00291 PALP,Pyridoxal-phosphate FT dependent enzyme, score 384.0, E-value 1.6e-112" FT /inference="protein motif:Pfam:PF00291" FT misc_feature complement(834080..834136) FT /note="PS00901 Cysteine synthase/cystathionine FT beta-synthase P-phosphate attachment site." FT /inference="protein motif:ProSite:PS00901" FT CDS complement(834216..834668) FT /transl_table=11 FT /gene="luxS" FT /locus_tag="CBO0725" FT /product="S-ribosylhomocysteinase" FT /EC_number="3.13.1.-" FT /db_xref="GOA:A5HZR8" FT /db_xref="InterPro:IPR003815" FT /db_xref="InterPro:IPR011249" FT /db_xref="UniProtKB/TrEMBL:A5HZR8" FT /protein_id="CAL82278.1" FT /translation="MVKVESFSLDHTKVKAPFVRKCGTQKGEMGDTITKFDLRFSQPNE FT EEMPTGAVHTLEHLLAGYMREKMDNIIDISPMGCRTGFYLIAWGEVEVDTIIEALNYSL FT NKVIETEEVPATNAVQCGNYRDHSLFSAKEYAKHVLNQGISNEVFR" FT misc_feature complement(834222..834665) FT /note="Pfam match to entry PF02664 LuxS, LuxS protein,score FT 208.4, E-value 1.1e-59" FT /inference="protein motif:Pfam:PF02664" FT CDS complement(834670..835812) FT /transl_table=11 FT /gene="metC" FT /locus_tag="CBO0726" FT /product="cystathionine beta-lyase" FT /EC_number="4.4.1.8" FT /db_xref="GOA:A5HZR9" FT /db_xref="InterPro:IPR000277" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5HZR9" FT /protein_id="CAL82279.1" FT /translation="MKIESLLIHGGIDGDKHTGAVNVPIYQTSTYKQFKFGENTGYEYS FT RTGNPTREALEKLVADLEKGYKGFAFASGLAAITAVLSLFKSGDEIVISNNVYGGTFRV FT LDKVFNHFDIKYSIVDTSNLDEVKNSINENVKAIYIETPTNPLMDITDIEEISKIAKEN FT DIYTIVDNTFMTPYLQKPISLGADIVIHSATKYLGGHSDVVAGIAVVNSEDLAERLHFI FT QNSTGGVLAPFDSFLLIRGIKTLAIRMDRHNSNAKLIAEFLRERDEVVKVYYPGFDTHP FT GHKIQSKQANGYGGMISFVLKDGYDYKKFFEGLKMVTFGESLGGVESLACHPASMTHGA FT IPYELRQKVGIVDNLIRLSVGIENADDLIEDLKNAFKESR" FT misc_feature complement(834682..835803) FT /note="Pfam match to entry PF01053 Cys_Met_Meta_PP,Cys/Met FT metabolism PLP-dependent enzyme, score 739.8,E-value FT 1.2e-219" FT /inference="protein motif:Pfam:PF01053" FT misc_feature complement(835210..835254) FT /note="PS00868 Cys/Met metabolism enzymes FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00868" FT CDS complement(835913..836539) FT /transl_table=11 FT /locus_tag="CBO0727" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZS0" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:A5HZS0" FT /protein_id="CAL82280.1" FT /translation="MNSLQYFDSIAPDWNVIRSEYFEERLKYKILSITNIKDKIVGDLG FT CGTGFVSLAVANEASIVFSIDNSINMLKELSASASKKDYKNIYPIKSSLDNLAIFDESL FT NVVFINMALHHIKNAKKAIAEMYRVLKKDGVVVISDVREHNGEWAKEEMFDEWLGFSKE FT QMTNWLEDAGFKNIEIENTNLSCKGYSSKGEYTETGIFLASAVKL" FT CDS 837449..839302 FT /transl_table=11 FT /gene="chiA" FT /locus_tag="CBO0728" FT /product="chitinase A" FT /db_xref="GOA:A5HZS1" FT /db_xref="InterPro:IPR001223" FT /db_xref="InterPro:IPR001579" FT /db_xref="InterPro:IPR008965" FT /db_xref="InterPro:IPR011583" FT /db_xref="InterPro:IPR012291" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:A5HZS1" FT /protein_id="CAL82281.1" FT /translation="MKNTKLIKLVAGIMAATFSLSLLTTKVEAKNIENKNTKNEVKQTV FT NSKDLERKLIGYFPEWAYNSEAQGYFKVTDLQWDSLTHIQYSFAMVDQATNKIKLGDKH FT AALEEEFKNYNLSYKGKKVELDPNLPYKGHFNLLQTMKKQYPDVNLLISVGGWAGSRGF FT YTMLDTDEGINTFADSCVDFIKKYNFDGVDIDFEYPSSTSQSGNPADFDLSEPRRAKLN FT ERYNILMKTLREKIDAASKKDNKDYILSAAVTASPWVLGGVKDNTYAKYLDFLSVMSYD FT YHGGWNEYVENLAGIYPDPKDRETASQIMPTLCMDWAYRYYRGILPPEKILMGIPYYTR FT GWENVQGGQNGLHGSSRTPASGKYNIWGDDLDNDGKLEPAGANPLWHVLNLMEKDNNLK FT VYWDDVEKVPYVWQNQERVFLSFENERSIDERLNYIKNKNLGGALIWVMNGDYGLNPNY FT EEGSSDINKGKYTFGDTLTKRLSNGLTNMGACSKTPEDSNNSLEPINVSVNFGGSYDHP FT NYTYDIKVKNYTGKEIKGGWEVSFDLPKSALYKSSWGGNYTLKDNGDFTTVTIKSGNWQ FT NINAGATVNLQGMIGLCFSDVRNIKFNDMKPVGDQKIIQQK" FT sig_peptide 837449..837533 FT /gene="chiA" FT /locus_tag="CBO0728" FT /note="probabilty 1.000, with cleavage site probability FT 0.993 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 837602..838801 FT /note="Pfam match to entry PF00704 Glyco_hydro_18,Glycosyl FT hydrolases family 18, score 373.8, E-value 1.9e-109" FT /inference="protein motif:Pfam:PF00704" FT misc_feature 838013..838039 FT /note="PS01095 Chitinases family 18 active site." FT /inference="protein motif:ProSite:PS01095" FT CDS 839668..839907 FT /transl_table=11 FT /gene="merP" FT /locus_tag="CBO0729" FT /product="heavy-metal-binding protein" FT /db_xref="GOA:A5HZS2" FT /db_xref="InterPro:IPR001014" FT /db_xref="InterPro:IPR001802" FT /db_xref="InterPro:IPR006121" FT /db_xref="UniProtKB/TrEMBL:A5HZS2" FT /protein_id="CAL82282.1" FT /translation="MFFSKKSSGKEIELKVEGMMCNHCEIAVKEALQKVDGVKKVKVSH FT FKKRAFITLEEGKDVEVFELMHAVKATGYDASEI" FT misc_feature 839704..839901 FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 51.8, E-value FT 1.6e-12" FT /inference="protein motif:Pfam:PF00403" FT misc_feature 839809..839856 FT /note="PS00050 Ribosomal protein L23 signature." FT /inference="protein motif:ProSite:PS00050" FT misc_feature 839860..839892 FT /note="PS00639 Eukaryotic thiol (cysteine) proteases FT histidine active site." FT /inference="protein motif:ProSite:PS00639" FT CDS complement(840021..840353) FT /transl_table=11 FT /locus_tag="CBO0730" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZS3" FT /protein_id="CAL82283.1" FT /translation="MSIKKSIDDLGKLFGKTVLENDKNIDAEKIGSTDLFKIILNKLFH FT EGNYDKAEDLIFEELEKNDSPEVYEIAMEFYNALLQKSDEELNESNFSREEIYQGLDDI FT KKFETN" FT CDS complement(840441..840941) FT /transl_table=11 FT /locus_tag="CBO0731" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009327" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:A5HZS4" FT /protein_id="CAL82284.1" FT /translation="MKDANYFIEKLDMIAHPEGGYYKEGFISAENITDSDLTTTFEDKR FT ILWTSIYFLLRNGEVSNFHRLKSDEMWYYHSGSPLTIYMITPEGELITEQLGLAIEKGE FT KPQVLVPKNYIFGSAMNNKGYALVGCMVSPGFEFRDFELFERDTLLNLYPKYKETIEKL FT TRV" FT misc_feature complement(840507..840932) FT /note="Pfam match to entry PF06172 DUF985, Protein of FT unknown function (DUF985), score 259.5, E-value 4.6e-75" FT /inference="protein motif:Pfam:PF06172" FT CDS complement(841475..842083) FT /transl_table=11 FT /locus_tag="CBO0732" FT /product="putative phage related protein" FT /db_xref="InterPro:IPR010359" FT /db_xref="UniProtKB/TrEMBL:A5HZS5" FT /protein_id="CAL82285.1" FT /translation="MANYYKNNYYTLDKIPKHRIEYITRSVKIFLKDFNLKHWPLDCVE FT LILKIQKDQSLPIQIKSMANLPHNFDAATVYSKESNSFLIIVNRNKIHYPFKISKHRRL FT NFTLAHELGHIYLKHHELPENCKTEKDLYIEELEADEFAGKILMPKNKIYTSNFTSIKE FT VATYFNVSESAVLKRLTNIKCSNLTYSRLKNYENVKIHF" FT misc_feature complement(841544..841609) FT /note="Predicted helix-turn-helix motif with score FT 1509.000, SD 4.33 at aa 159-180, sequence FT TSIKEVATYFNVSESAVLKRLT" FT misc_feature complement(841736..841765) FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS complement(842176..842598) FT /transl_table=11 FT /locus_tag="CBO0733" FT /product="immunity repressor protein" FT /db_xref="GOA:A5HZS6" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5HZS6" FT /protein_id="CAL82286.1" FT /translation="MKFGEFFKNIRKEKGLSQRQLAELSHISNTEISRIESGERQNPSP FT NILKSIAPHLGISYGELMLKAGYIDESIEHEKYTEHIFRNSDGEFADTIKLAKNIHDKD FT SEILTIMNRVTSELPKEDIKAIKEFANFYLNKNNNK" FT misc_feature complement(842413..842580) FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 58.9, E-value 1.1e-14" FT /inference="protein motif:Pfam:PF01381" FT misc_feature complement(842488..842553) FT /note="Predicted helix-turn-helix motif with score FT 1566.000, SD 4.52 at aa 16-37, sequence FT LSQRQLAELSHISNTEISRIES" FT CDS 842742..842942 FT /transl_table=11 FT /locus_tag="CBO0734" FT /product="putatative phage-related repressor" FT /db_xref="GOA:A5HZS7" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5HZS7" FT /protein_id="CAL82287.1" FT /translation="MRPNKEYILELVNKNNWSQNKFAKKAGVSNATISRWTNGKRGAGS FT ELIAGIIRAFPNESINKLFFL" FT misc_feature 842763..842930 FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 44.7, E-value 2.1e-10" FT /inference="protein motif:Pfam:PF01381" FT misc_feature 842790..842855 FT /note="Predicted helix-turn-helix motif with score FT 2294.000, SD 7.00 at aa 17-38, sequence FT WSQNKFAKKAGVSNATISRWTN" FT CDS 843044..844303 FT /transl_table=11 FT /locus_tag="CBO0735" FT /product="putative phage replication protein" FT /db_xref="InterPro:IPR006343" FT /db_xref="UniProtKB/TrEMBL:A5HZS8" FT /protein_id="CAL82288.1" FT /translation="MAKYRQLYTEFWKDGFVVELEPEEKYFYLYLLTNANTSQCGIYEL FT PKKIIENETGYNRETVDNLIKKFEEYNKIIYSEETKEIIILNWFKYNEPNNINAIKCVN FT KEIKKIKNRNFVKELYFQYSKSGLEVDKLFYEIEDGFIKDKNNKAEDIYISITDHGNSD FT YGYKNIDRNSKFENKSIDIDKNIEIETSNKHIVRGDEGAYKAPVSKEIINNKQKEINNK FT EEVISNSCCSNKEKGSKYNNINKNSNCEFKSKEELKLNSTVKSNEFNKDIDITTTTGKN FT TTATEEEVGEIESCRANFKSIRDVIAVFENNIHKMAPIERKKIINWSNKFSYDVIVMAI FT EEAIFNNIKNIGYIEKILDTWFSKGLTSIGDIKSYKARWEEKKKKIKSKENTVDRWNDF FT EQREYDFEKLERKLLGWEMA" FT misc_feature 843956..844165 FT /note="Pfam match to entry PF04271 DnaD, DnaD-like FT domain,score 41.6, E-value 1.9e-09" FT /inference="protein motif:Pfam:PF04271" FT CDS 844322..844861 FT /transl_table=11 FT /locus_tag="CBO0736" FT /product="putative RNA polymerase sigma factor" FT /db_xref="GOA:A5HZS9" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR007630" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:A5HZS9" FT /protein_id="CAL82289.1" FT /translation="MYKLLEKYRNGDIGALNEIIENFNPLILKEASRWRIGGYEYEDLV FT QHGYLSVIKAVNMFKGEESKFVPYCINAIKTNYKALLKGEIKHHREIPDENILNKGNEY FT MFTIEDEIIAYEKTKEIYEALDKLTQEEKQVINDFYIKNNSLNKIAEDTNKTYNSVRYT FT KDKAIKKLQKILEEHS" FT misc_feature 844376..844573 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 13.4, E-value 0.0068" FT /inference="protein motif:Pfam:PF04542" FT CDS 844947..845303 FT /transl_table=11 FT /locus_tag="CBO0737" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR008815" FT /db_xref="InterPro:IPR012657" FT /db_xref="InterPro:IPR023377" FT /db_xref="UniProtKB/TrEMBL:A5HZT0" FT /protein_id="CAL82290.1" FT /translation="MNSVAYDKAFSFALDIIELYKNLTLKKREYVLSKQILRSGTSIGA FT NIKEGINGQSKKDFLSKISIALKEAEETEYWIELLRYSNYIDDKTSSLLLENCKEIIKI FT LVTTIKTTKMNLKL" FT CDS 845432..845623 FT /transl_table=11 FT /locus_tag="CBO0738" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR024419" FT /db_xref="UniProtKB/TrEMBL:A5HZT1" FT /protein_id="CAL82291.1" FT /translation="MVNSMYDQLVMLISNVGFPIAVSLYLLLRIEKKLEELTKALNYLD FT KSILSAIEHQKDEYFTKK" FT misc_feature 845459..845515 FT /note="1 probable transmembrane helix predicted for CBO0738 FT by TMHMM2.0 at aa 10-28" FT /inference="protein motif:TMHMM:2.0" FT CDS 845867..846697 FT /transl_table=11 FT /locus_tag="CBO0739" FT /product="putative exported phosphoesterase" FT /note="No significant database matches" FT /db_xref="GOA:A5HZT2" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:A5HZT2" FT /protein_id="CAL82292.1" FT /translation="MKMKKFKKLLSFIIITLLVSFCFPTTVYSKTVKDTRYIGVTSDIH FT NKIPNLKKWLSNLKSTTTSLDHMIFGGDYVGPDSRDACVSEVKSQFSGTSSILAKGNHD FT KSKGGKYDSGLVVNNDDYAIYVMDSSSKSFTSSDMKNLKSSLDQINSSKPVFVVSHCPI FT HYFGKRNIGNADKLLSLLNNHSNVVFLWGHNHSKGDTNYGTVKVKGDTIQSSKSSSKVP FT INFTYANMGAMNQGNNGAYGLLMNLINSSGNTNIKFYYKDLSGKTVSNYSVDIS" FT sig_peptide 845867..845951 FT /locus_tag="CBO0739" FT /note="probabilty 1.000, with cleavage site probability FT 1.000 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 845972..846457 FT /note="Pfam match to entry PF00149 FT Metallophos,Calcineurin-like phosphoesterase, score 25.8, FT E-value 0.0001" FT /inference="protein motif:Pfam:PF00149" FT CDS 846935..847156 FT /transl_table=11 FT /locus_tag="CBO0740" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR012454" FT /db_xref="UniProtKB/TrEMBL:A5HZT3" FT /protein_id="CAL82293.1" FT /translation="MAVSKNLLERNLALEYQDGLDKKGKAIMKKATYKNVKLTAESEAL FT MEVVDAINPLMPEGISEARVVENYVLIK" FT CDS 847176..847403 FT /transl_table=11 FT /locus_tag="CBO0741" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR021321" FT /db_xref="UniProtKB/TrEMBL:A5HZT4" FT /protein_id="CAL82294.1" FT /translation="MSTKKYLNLVFRTTEDSTSTIKIPKVKEDVTEEEIKNCGKAIIDQ FT NIFQNKNGDLLALKVARIITTDTEEIKIEE" FT CDS 847552..848256 FT /transl_table=11 FT /locus_tag="CBO0742" FT /product="putative phage related N-acetylmuramoyl-L-alanine FT amidase" FT /db_xref="GOA:A5HZT5" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR002502" FT /db_xref="InterPro:IPR015510" FT /db_xref="UniProtKB/TrEMBL:A5HZT5" FT /protein_id="CAL82295.1" FT /translation="MYIINSNLDFSGLTYGNNPKMIILHHAEASGCSIQDIHSWHLNNG FT WSGCGYNYFIKKDGSIYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEVGNSQYNSLK FT ELICYLQNKYNINKIYAHRELNQTDCPGNNFPLSRIKKECLGGDNSIESSSKQNKNYPG FT YLLKYNPNRFDGNVKVIQSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDGI FT VGENTWNRIMRE" FT misc_feature 847573..847995 FT /note="Pfam match to entry PF01510 FT Amidase_2,N-acetylmuramoyl-L-alanine amidase, score 74.5, FT E-value 2.3e-19" FT /inference="protein motif:Pfam:PF01510" FT misc_feature 848065..848250 FT /note="Pfam match to entry PF01471 PG_binding_1, Putative FT peptidoglycan binding domain, score 49.7, E-value 6.6e-12" FT /inference="protein motif:Pfam:PF01471" FT CDS complement(848293..848400) FT /transl_table=11 FT /locus_tag="CBO0743" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZT6" FT /protein_id="CAL82296.1" FT /translation="MASPRRQCVNYIIKFNLLWCVGDPKGILKIKHFVN" FT CDS complement(848562..848792) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0744" FT /product="insertion sequence putative ATP-binding protein FT (fragment)" FT /note="Partial CDS. Similar to an internal region of FT Bacillus thuringiensis insertion sequence is232 putative FT ATP-binding protein SWALL:ISTB_BACTB (SWALL:Q99338) (250 FT aa) fasta scores: E(): 3.2e-06, 48.21 38d in 56 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82297.1" FT CDS 848968..849246 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0745" FT /product="putative regulatory protein (partial)" FT /note="Partial CDS. Similar to the N-terminal region of FT Clostridium difficile TcdD protein tcdD SWALL:Q9EXR1 FT (EMBL:AJ011301) (184 aa) fasta scores: E(): 4.5e-06, 36.9 FT id in 84 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82298.1" FT CDS 849268..849510 FT /transl_table=11 FT /locus_tag="CBO0746" FT /product="putative phage related protein" FT /db_xref="InterPro:IPR024405" FT /db_xref="UniProtKB/TrEMBL:A5HZT9" FT /protein_id="CAL82299.1" FT /translation="MIKLENEILKSALSQGIWAVLSVFLLFYILKAQEKRDQKQDEREK FT NYQEIISKITDKLAIVEVVKKDVEDIKQYVIKNKE" FT misc_feature 849304..849357 FT /note="1 probable transmembrane helix predicted for CBO0746 FT by TMHMM2.0 at aa 13-30" FT /inference="protein motif:TMHMM:2.0" FT CDS 849601..849816 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0746A" FT /product="putative phage related lysin (partial)" FT /note="Partial CDS. Similar to an internal region of FT Bacteriophage PL-1 N-acetylmuramoyl-L-alanine amidase lyS FT SWALL:Q9MCC6 (EMBL:AB035861) (350 aa) fasta scores: E(): FT 4.4e-05, 40 38d in 70 aa, and to Enterococcus faecalis FT enterolysin a enlA SWALL:Q9F8B0 (EMBL:AF249740) (343 aa) FT fasta scores: E(): 0.00024, 38.09 38d in 63 aa" FT /note="was marked partial" FT CDS 849839..850567 FT /transl_table=11 FT /locus_tag="CBO0747" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZU0" FT /protein_id="CAL82301.1" FT /translation="MQLVSLSGYNVRYRAYVGGRWLPWITGNSDYAGIFGQPIEAIQAE FT IVSGNSGGGDMSQSKILKYNSSLSPEQQKLGHWCGPAALNAVDCFYYNLSGKNTDKTQN FT DMAILLATTTQTSFGSCWQIALNGNIPGNLYSLYRAENYTSSAWISKVKERIMRNIDMG FT YPVIADTLQNASRGFLTENYNQGRDIYHYITVIGYMIKSDGSCYFRYMDSYSKNHGVYT FT VPLYTLANITYGNDLGIVCY" FT CDS complement(851059..851400) FT /transl_table=11 FT /locus_tag="CBO0748" FT /product="putative phage-related protein" FT /note="Similar to an internal region of Bacillus cereus FT enterotoxin SWALL:Q9RMN6 (EMBL:AF192766) (419 aa) fasta FT scores: E(): 0.0082, 31.31 38d in 99 aa, and to C-terminal FT region of Bacillus anthracis prophage FT lambdaba01,N-acetylmuramoyl-L-alanine amidase, family 2 FT ba3767 SWALL:Q81XZ5 (EMBL:AE017035) (310 aa) fasta scores: FT E(): 1.2, 29.89 38d in 97 aa" FT /db_xref="InterPro:IPR003646" FT /db_xref="InterPro:IPR013247" FT /db_xref="UniProtKB/TrEMBL:A5HZU1" FT /protein_id="CAL82302.1" FT /translation="MIKKKLAGALAICSFLTLTYGTTAFAANDSTNNVVQNKNVIQSSW FT KGPYQAVGMVTADVLNVRQSPSMSSNILGQLDYGERVDIVRLWGNDDWIMIEFEGSIGW FT VARPFVRIV" FT sig_peptide complement(851319..851400) FT /locus_tag="CBO0748" FT /note="probabilty 1.000, with cleavage site probability FT 0.989 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT CDS 851941..852393 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0749" FT /product="putative transposase (partial)" FT /note="Partial CDS. Similar to internal regions of several FT transposases including Thiobacillus ferrooxidans FT resolvase-like protein SWALL:O33828 (EMBL:U73041) (859 aa) FT fasta scores: E(): 4.3e-18, 42.74 38d in 124 aa, and to FT Streptomyces fradiae transposase for transposon tn4556 tnpA FT SWALL:TNPA_STRFR (SWALL:P20189) (892 aa) fasta scores: E(): FT 6.4, 26.44 38d in 121 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82303.1" FT CDS complement(852692..853669) FT /transl_table=11 FT /locus_tag="CBO0750" FT /product="putative peptidoglycan binding protein" FT /db_xref="GOA:A5HZU3" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR011094" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:A5HZU3" FT /protein_id="CAL82304.1" FT /translation="MITYKVQYGDTLYTIAHRLGICIGMLALSNNIFWPHQIFEGQELL FT IPIAVPNKDLNSRNHRAKYDLETIKNIFSQEGTTTGGVLKFTFPRFDLKVRINGIIIEP FT DLALTSWVAFNQLGNHSMMMGDLVLLENEVGPIMSSLIENGIEVTALHNHLLHESPRIM FT YLHIKGEGDPIKLAQSVKNALSLTTTPFNIKKQQPPSQIDWTVIEGILGHKGSHKGKVL FT QLSVPRTTIISEDGHQLSPAMGISHAINFQSVGRNVATTGDFVLLANEVNPVISILKKN FT NIAVTAIHNHMLTEVPRLFFMHFWAIDKPEKLAQAFRAVLDLAK" FT misc_feature complement(853529..853660) FT /note="Pfam match to entry PF01476 LysM, LysM domain,score FT 32.8, E-value 8.4e-07" FT /inference="protein motif:Pfam:PF01476" FT CDS 853934..854350 FT /transl_table=11 FT /gene="arsC" FT /locus_tag="CBO0751" FT /product="arsenate reductase" FT /EC_number="1.20.4.1" FT /db_xref="GOA:A5HZU4" FT /db_xref="InterPro:IPR017867" FT /db_xref="InterPro:IPR023485" FT /db_xref="UniProtKB/TrEMBL:A5HZU4" FT /protein_id="CAL82305.1" FT /translation="MKPKVAFICVHNSCRSQMAEALGKLFASDIFESYSAGTETKPVIN FT QDAVRIIKKLYGVDMNKCHTSKLLDDIPKIDIAIKMGCNVMCPFLPAKHTEDWGLEDPT FT DKSDEEFINTAKIIEYKIKDLANRIKNKEIDLDK" FT misc_feature 853940..854317 FT /note="Pfam match to entry PF01451 LMWPc, Low molecular FT weight phosphotyrosine protein phosphatase, score FT 48.5,E-value 1.6e-11" FT /inference="protein motif:Pfam:PF01451" FT repeat_region 854620..854660 FT CDS complement(854686..855129) FT /transl_table=11 FT /locus_tag="CBO0752" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR010181" FT /db_xref="UniProtKB/TrEMBL:A5HZU5" FT /protein_id="CAL82306.1" FT /translation="MNNIDFDKIRKVAEDYYRNGDFYCSEAVVKTIRDEFKIEVSDDVI FT AMASGFPVGMGGSGCTCGAITGGIMALGMVFGRKEAKDPRVVKSMELSKKLHDDFKKEH FT KSLCCRFLTKDMELGSKEHMDQCIAFTGEVAERVARIIVENSK" FT misc_feature complement(854902..854970) FT /note="1 probable transmembrane helix predicted for CBO0752 FT by TMHMM2.0 at aa 54-76" FT /inference="protein motif:TMHMM:2.0" FT CDS 855490..855813 FT /transl_table=11 FT /gene="arsR" FT /locus_tag="CBO0753" FT /product="arsenical resistance operon repressor" FT /db_xref="GOA:A5HZU6" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR018334" FT /db_xref="UniProtKB/TrEMBL:A5HZU6" FT /protein_id="CAL82307.1" FT /translation="MSLNYDDNAKIIKALSDGNRLKIIDILSCGEKCACDILEHFQFTQ FT PTLSHHMKVLIDCGLVKSRKEGLWSHYSLNITNCNKLILFFMSIITDTDDCICKNKSKC FT DCE" FT misc_feature 855523..855756 FT /note="Pfam match to entry PF01022 HTH_5, Bacterial FT regulatory protein, arsR family, score 90.5, E-value FT 3.5e-24" FT /inference="protein motif:Pfam:PF01022" FT misc_feature 855586..855642 FT /note="PS00846 Bacterial regulatory proteins, arsR family FT signature." FT /inference="protein motif:ProSite:PS00846" FT CDS 855835..856206 FT /transl_table=11 FT /gene="arsD" FT /locus_tag="CBO0754" FT /product="arsenical resistance operon trans-acting FT repressor" FT /db_xref="GOA:A5HZU7" FT /db_xref="InterPro:IPR010712" FT /db_xref="UniProtKB/TrEMBL:A5HZU7" FT /protein_id="CAL82308.1" FT /translation="MKKMIIFDPAMCCSTGVCGPSVDPELLRVSTTINRLKNNGVLVER FT HNLTSNPQIFVDNKKINEILNKEGVEILPVTMVDGIIVKTKAYPTNKEFCKLLDIPENS FT LKITIKKPSKGCNCKGGCC" FT CDS 856225..857970 FT /transl_table=11 FT /gene="arsA" FT /locus_tag="CBO0755" FT /product="arsenical pump-driving ATPase" FT /EC_number="3.6.3.16" FT /db_xref="GOA:A5HZU8" FT /db_xref="InterPro:IPR016300" FT /db_xref="UniProtKB/TrEMBL:A5HZU8" FT /protein_id="CAL82309.1" FT /translation="MFKKFNVEDINLTKYLFFTGKGGVGKTSTACAVAVTLADKGKKIM FT LVSTDPASNLQDVFNTKLNNKGVTIKEVPNLVVANFEPEEAAAEYRESVIAPYRGKLPE FT AVLKNMEEQLSGSCTVEIAAFNEFSTFITDEKVEKEYDHIIFDTAPTGHTLRMLQLPSA FT WSNFINESTHGASCLGQLSGLESKKEVYKNAVNTLADKDKTTLILVSRPEVSPLKEAER FT ASKELQDIGVNNQVLVINGVLEEHEDYLSNAIYTKQQKALEDIPESLKIVETFQIPLRP FT YNVTGLENLRAFLKNNNIKYNDEKLNTTNIPKLNKVIEDLYNTDKKVIFTMGKGGVGKT FT TIAAAIAVGLAKKGKKVHLTTTDPADHLKFVLDEDYGITLSHIDEKKELEKYKEEVLIK FT ARKTMSEDDIAYVEEDLRSPCTQEIAVFRAFAEIVERSENEVVVIDTAPTGHTLLLLDC FT TQSYNKEIQRSQGDIPKSVKKLLPKLRNEEHTEVIIVTLAETTPVYEAMRLQEDLNRAG FT IHSKWWVINSSFYVADTTNSILKVKANNEIQWINKVNEISKGNFAVIEWMPEEVKGEML FT NRLIK" FT misc_feature 856261..857121 FT /note="Pfam match to entry PF02374 FT ArsA_ATPase,Anion-transporting ATPase, score 317.6, E-value FT 1.5e-92" FT /inference="protein motif:Pfam:PF02374" FT misc_feature 856282..856305 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 857200..857967 FT /note="Pfam match to entry PF02374 FT ArsA_ATPase,Anion-transporting ATPase, score 45.6, E-value FT 1.6e-15" FT /inference="protein motif:Pfam:PF02374" FT misc_feature 857221..857244 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 858069..859139 FT /transl_table=11 FT /gene="arsB" FT /locus_tag="CBO0756" FT /product="putative arsenical pump membrane protein" FT /db_xref="GOA:A5HZU9" FT /db_xref="InterPro:IPR002657" FT /db_xref="InterPro:IPR004706" FT /db_xref="UniProtKB/TrEMBL:A5HZU9" FT /protein_id="CAL82310.1" FT /translation="MSLDKKKEKKGLGVFERYLTIWVALCIVVGILIGRFIPQIPETLN FT KFEYYNVSIPTAILIWLMIYPMMLKIDFSSIVGVSKKPKGLIVTCVTNWLIKPFTMYLI FT ASFFLKVVFKSFISANLATEYLAGAVLLGAAPCTAMVFVWSYLTKGDPAYTLVQVAVND FT LIILVAFAPIVAFLLGVSDVTVPYGTLILSTILFVVIPLTMGYLTRKSIIKNKGIEYFN FT DVFLKKFDNVTIIGLLLTLVIIFSFQGEIILNNPLHILLIAVPLTIQTFLIFTIAYGWA FT KLWKLPHNIAAPAGMIGASNFFELAVAVAISLFGLKSGAALATVVGVLTEVPIMLTLVR FT IANNTRGWFSTEIIDK" FT misc_feature order(858126..858179,858237..858305,858324..858383, FT 858441..858509,858543..858611,858621..858689, FT 858762..858830,858843..858911,858948..859016, FT 859026..859094) FT /note="10 probable transmembrane helices predicted for FT CBO0756 by TMHMM2.0 at aa 20-37, 57-79, 86-105, FT 125-147,159-181, 185-207, 232-254, 259-281, 294-316 and FT 320-342" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 858237..858833 FT /note="Pfam match to entry PF01758 SBF, Sodium Bile acid FT symporter family, score 160.6, E-value 2.9e-45" FT /inference="protein motif:Pfam:PF01758" FT CDS join(859398..860048,860052..860222) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0757" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. This CDS contains an in-frame TGA stop FT codon. Similar to Halobacterium sp. orf h1434 vng5177C FT SWALL:O52025 (EMBL:AF016485) (391 aa) fasta scores: E(): FT 3.1e-38, 44.44 38d in 279 aa" FT /db_xref="PSEUDO:CAL82311.1" FT /inference="protein motif:ProSite:Pseudog" FT CDS 860533..861081 FT /transl_table=11 FT /locus_tag="CBO0759" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR013078" FT /db_xref="UniProtKB/TrEMBL:A5HZV1" FT /protein_id="CAL82312.1" FT /translation="MNRSLLDLLRSGGYILYVRHGEATVGEDQPNLNFLYCFTQRNLSG FT TGRRQAIYYGQIIRNLQIPINYPVLTGPLCRTIETAQLAFGTVNVQIDPFWFQVYRLSG FT NLSAAEQRRILDSLQTRLEIIPTQGSNMVIVAHSFPKGIGLGEIPDMGTVIVKPLGQGN FT GYEVVAKLSLADLLNLERY" FT CDS 861589..862167 FT /transl_table=11 FT /locus_tag="CBO0760" FT /product="TetR-family transcriptional regulator" FT /db_xref="GOA:A5HZV2" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023772" FT /db_xref="UniProtKB/TrEMBL:A5HZV2" FT /protein_id="CAL82313.1" FT /translation="MPKGFTENEKTIITEKLIRECKSNWQKYGYKKTSIDVLCRDIGIS FT KGSFYSFFDTKEALFYQVIKETQENLYEIVEDRISQNQSKYGVAEALKEIYLEYSKSSF FT MYDTKNPDFLSFFNKLSEQQRKELTEKSYVGTKFMLNKPFLSLKIDEDLAISILTAMLT FT SISQKDKMLCDSVEVFGFMIDNLIDDIFN" FT misc_feature 861661..861777 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 24.7, E-value FT 1.6e-06" FT /inference="protein motif:Pfam:PF00440" FT misc_feature 861673..861765 FT /note="PS01081 Bacterial regulatory proteins, tetR family FT signature." FT /inference="protein motif:ProSite:PS01081" FT CDS 862177..862434 FT /transl_table=11 FT /locus_tag="CBO0761" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZV3" FT /protein_id="CAL82314.1" FT /translation="MKNLDVKQHTKKCMDFAKKAGDGSFPSKEAAKVGSIVGIGIGGVL FT LGIGIYGISQSAVYGTGSLVVGAVAGISNCANLKRIKRKK" FT misc_feature order(862273..862332,862342..862410) FT /note="2 probable transmembrane helices predicted for FT CBO0761 by TMHMM2.0 at aa 33-52 and 56-78" FT /inference="protein motif:TMHMM:2.0" FT CDS 862463..862651 FT /transl_table=11 FT /locus_tag="CBO0762" FT /product="putative conjugative transposon protein" FT /db_xref="UniProtKB/TrEMBL:A5HZV4" FT /protein_id="CAL82315.1" FT /translation="MIEVKWILCPVCSNKTRQRIREDTELKNFPLYCRKCKQETLIKVQ FT QLNISVIKEPDAKMQSQ" FT CDS 862906..863100 FT /transl_table=11 FT /locus_tag="CBO0763" FT /product="DNA-binding protein" FT /db_xref="GOA:A5HZV5" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5HZV5" FT /protein_id="CAL82316.1" FT /translation="MVNRKMKIARVECDLSQQQLAEKVGVTRQTISMIESGKYNPSLKL FT CIGICEVLNKTLNDLFWED" FT misc_feature 862921..863085 FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 69.3, E-value 8.7e-18" FT /inference="protein motif:Pfam:PF01381" FT misc_feature 862948..863013 FT /note="Predicted helix-turn-helix motif with score FT 2365.000, SD 7.24 at aa 15-36, sequence FT LSQQQLAEKVGVTRQTISMIES" FT CDS 863104..863535 FT /transl_table=11 FT /locus_tag="CBO0764" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZV6" FT /protein_id="CAL82317.1" FT /translation="MINNIMKNNKLVDMLEEESYIENDERIHKIYNEIDKEKYTIIFLA FT LLAFYLYELMILQKNDTPLVFVIIFDGIYTDIKLAMSEAYIKTNLKYMETCGALLLLLR FT YFKYKFLININFIMLIIISCVVGYLYIKLMLYINNRSKI" FT misc_feature order(863218..863271,863431..863499) FT /note="2 probable transmembrane helices predicted for FT CBO0764 by TMHMM2.0 at aa 39-56 and 110-132" FT /inference="protein motif:TMHMM:2.0" FT CDS 863909..864844 FT /transl_table=11 FT /locus_tag="CBO0765" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZV7" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZV7" FT /protein_id="CAL82318.1" FT /translation="MENSELVLDVKNISKKRGKTSILKDVNFSIGKGEICGFVGRNGAG FT KTTLMKIITSMLFPNEGEIIICGKNLKTEREEALKNIGAVIETPEMYGYLTGRQNLNYI FT ASMLKNVTKDEIEEAIRYSNLGNKIDEKVKKYSLGMKQRLGLAQALIGDVSLLILDEPT FT NGLDPLGVVELKNTINTLAKEKGVSVFISSHILSEIESICTKVVFIDNGKIINIQKMDE FT EPQINNTKNMFIKTDLPEKAAEIIKSIPDIELLKVQKNGVSVLVNTDICDITKILIALH FT NEGVNVEGFSEVKEKLEDKFIKIVGDNNDG" FT misc_feature 864005..864544 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 163.0, E-value 5.4e-46" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 864026..864049 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 864314..864358 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 864837..865973 FT /transl_table=11 FT /locus_tag="CBO0766" FT /product="ABC transporter, permease protein" FT /note="Highly similar to downstream CDS CBO0767 (89.9 id)" FT /db_xref="UniProtKB/TrEMBL:A5HZV8" FT /protein_id="CAL82319.1" FT /translation="MAKYIWEELKRVLIKKKISIIIILIIIVAFGGVNIFNKKTLDERL FT EKAKIILNNQIKFKEDEKAINDTKQEISDIEKTLSMIKNYDKSKIDEKILKLEKENNPE FT NDYEISLLKYEKKNNIEKKELMPKGMYTTMEFLAQPTISIFYILILIELLSDILSGEYA FT PNNIKMSLTKPISRKKIIISKFVVSTIIGASAIIISTIIFIIEAGIHFGLSDYKMPFDV FT GAKYVLNKSLPLTVETSQMEHAANSISVVPLWSMIVRFVLIAILVSIVSISIIIFISAI FT CKRSLISSIINFILIIITSLAYNWRFMSNNILANKYGALLKFIPIPYIFDIPEVSSGDV FT SIRLASSINIFFVLIVCVVWTLIMMFLSTYIFAKRDFD" FT repeat_region 864837..865529 FT /note="repeat unit 4" FT misc_feature order(864891..864944,865242..865310,865389..865457, FT 865602..865670,865689..865757,865884..865952) FT /note="6 probable transmembrane helices predicted for FT CBO0766 by TMHMM2.0 at aa 20-37, 137-159, 186-208,257-279, FT 286-308 and 351-373" FT /inference="protein motif:TMHMM:2.0" FT CDS 866207..867343 FT /transl_table=11 FT /locus_tag="CBO0767" FT /product="putative ABC transporter, permease protein" FT /note="Highly similar to upstream CDS CBO0766 (89.9 38d)" FT /db_xref="UniProtKB/TrEMBL:A5HZV9" FT /protein_id="CAL82320.1" FT /translation="MAKYIWEELKRVLIKKKISIIIILIIIVAFGGVNIFNKKTLDERL FT EKAKIILNNQIKFKEDEKAINDTKQEISDIEKTLSMIKNYDKSKIDEKILKLEKENNPE FT NDYEISLLKYEKKNNIEKKELMPKGMYTTMEFLAQPTISIFYILILIELLSDILSGEYA FT PNNIKMSLTKPISRKKIIISKFVVSTIIGASAIIISTIIFIIEAGIHFGLSDYKMPFDV FT GAKYVLNKSIPLTVTTSQMEPVRNSISIVPLWSGIVRFVLIAILVSIAAISILIFISSL FT CKKSLISSIISFVLVIAASLIYFSKLMGDNILATKYGVLLKFTPIPYMFQIFEVLSGNI FT SVRLASSINIFFVLIVCLGWSLIMMFLSTYIFAKRDFD" FT repeat_region 866207..866899 FT /note="repeat unit 4" FT misc_feature order(866264..866317,866612..866680,866759..866827, FT 866972..867040,867059..867118,867254..867322) FT /note="6 probable transmembrane helices predicted for FT CBO0767 by TMHMM2.0 at aa 20-37, 136-158, 185-207,256-278, FT 285-304 and 350-372" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 867727..867925 FT /note="intergenic repeat 1" FT repeat_region complement(867760..867818) FT repeat_region complement(867891..867925) FT CDS 868034..868495 FT /transl_table=11 FT /locus_tag="CBO0767A" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5HZW0" FT /db_xref="InterPro:IPR007710" FT /db_xref="UniProtKB/TrEMBL:A5HZW0" FT /protein_id="CAL82321.1" FT /translation="MSKRVFLAAPFKGAIKEKQSIMKEQEKKRIEDLILFLEEKGWEVD FT NAHKREEWGANFMSPDQCTKLDYDAIKECDLFIAFPGVPVSPGTHIEIGWASAMGKKII FT LLLAEKEENYAYLIRGLHTVSNVHYIIYNKEKEYLQKLDLYLDGENNEV" FT CDS 868485..869459 FT /transl_table=11 FT /locus_tag="CBO0768" FT /product="putative phage-related deoxyuridylate FT hydroxymethyltransferase" FT /EC_number="2.1.2.-" FT /db_xref="GOA:A5HZW1" FT /db_xref="InterPro:IPR000398" FT /db_xref="InterPro:IPR023451" FT /db_xref="UniProtKB/TrEMBL:A5HZW1" FT /protein_id="CAL82322.1" FT /translation="MKFKNFHEAYIKNLNDVYYNPEFINQPRGNVSKERLNYFMILENP FT RERICYTKSRKTNIIFNFAEALWYLSGSNDLDYISYYASNMKKYSMDGKTLTGTAYGPK FT IFSYGYNKINQWNRIIKLFKEDPDTKRGFIEIFDANEDLSLKNIDVSCTIGFQFFIREH FT KLYMTTFMRANDAYRGIISDVFSFTFIQEFLATELNLDIGQYSHQVATTHIYEPDFKLA FT EKVLCESKSAKKELSFPRMPKKDNWEDLKIVLQYEKELRKQSIHLTKKDIDELEIDKYW FT KQIICLFVLYQEIYYGDNLDYEIYESLEPLYQYLFSNKWNQYF" FT misc_feature 868503..869279 FT /note="Pfam match to entry PF00303 FT thymidylat_synt,Thymidylate synthase, score -109.4, E-value FT 3.3e-05" FT /inference="protein motif:Pfam:PF00303" FT CDS 869471..870229 FT /transl_table=11 FT /locus_tag="CBO0769" FT /product="putative methyltransferase" FT /db_xref="GOA:A5HZW2" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:A5HZW2" FT /protein_id="CAL82323.1" FT /translation="MGTCWKDEEVSKKFNLYNDMLENILGFDYIFQNLKSNESIKKILD FT FGCGPGKVAERMAKIKPESQIIAVDQSQNMLDIAMKEHNKENIDYRLIEQNQLKEIEKN FT SIDCVVLCFVIINNSDKDRIKTIFQEIFRALKKGGKFFILDSNPNAAGVEFSTFTNGKS FT GQAYHLGDHKKQFLKIPNNEVLILEDYYWPIDFYINNLEAVGFENYKIVEPTIEKINKR FT DLNAIEKTYDIKCWGSEKNKPPFIIFDVEK" FT misc_feature 869474..870100 FT /note="Pfam match to entry PF01209 FT Ubie_methyltran,ubiE/COQ5 methyltransferase family, score FT -98.4, E-value 3.7e-06" FT /inference="protein motif:Pfam:PF01209" FT CDS 870275..871489 FT /transl_table=11 FT /locus_tag="CBO0770" FT /product="thiaminase I precursor" FT /EC_number="2.5.1.2" FT /db_xref="GOA:A5HZW3" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:A5HZW3" FT /protein_id="CAL82324.1" FT /translation="MKLKNLFKRSLSLLFSFIMIFTLVSGLNVKAFSGDEPKQTLNVAL FT YEYVPDPIRFKKAVETEWNKKEPNIKLNFVDWDCYSEDPPKDLDVFVFDAVYLSHFVKE FT GYLSEIPEKDIKNKEDILPFAMEGCTIKGSAYAIPQIICTNLLFSRKGDYDIQKVNSVY FT DLYDKLGKFTSEDIILPNNKGLLIDMSGGTSKACMYLDSLIDTTQEYTKFCSLPNLNEL FT NKDAIESLVLLQSMAGKSQANYWPENNDSYIRAKWFINGKGRAYIGYTEAMSQMKEFAN FT DIDFKTISLSKNSNIPIFYGDVVGINSSITNSYKKEKAIELANIITDKNTMVKAVSPDE FT NNKYPQYLLPARRSVYHNLGNKYPIYGKLYKIADNSNNKLFRTGPEIREWLKQAKKIIT FT EYLQQ" FT sig_peptide 870275..870365 FT /locus_tag="CBO0770" FT /note="probabilty 1.000, with cleavage site probability FT 0.624 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT CDS 871567..872394 FT /transl_table=11 FT /gene="thiD2" FT /locus_tag="CBO0771" FT /product="phosphomethylpyrimidine kinase" FT /EC_number="2.7.4.7" FT /note="This CDS is also similar to CBO0451 (52.308 identity FT in 260 aa overlap)" FT /db_xref="GOA:A5HZW4" FT /db_xref="InterPro:IPR004399" FT /db_xref="InterPro:IPR013749" FT /db_xref="UniProtKB/TrEMBL:A5HZW4" FT /protein_id="CAL82325.1" FT /translation="MKKVLSIAGSDCSGGAGIQADLKTFSAHGVFGMSVIVSVVAENTS FT RVIDIQDITPDMIKSQIDAVYEDIGTDAVKIGMLSTPDCMKAVSEKLQEYKPKNVVIDP FT VMYAKNGCPLMDTNSVSTLIESIICHADILTPNIPEAERISGYKIKTLEDMEKAAVIIE FT GMGCKSVLIKGGHYIGDAVDVLYDGNKFYHYKTQRIHTKNTHGTGCTLSSAIASNLALG FT FEINEAVKRAKNYITMAIEHSLEIGKGNGPTNHFYQVYLNGLKGMELDNHTRS" FT CDS 872566..872799 FT /transl_table=11 FT /locus_tag="CBO0772" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZW5" FT /protein_id="CAL82326.1" FT /translation="MRKVYKNPKELATCLKDLVDLYLDDLMTYEKLEEKVSKIVEANKN FT SIYKNEVINTKLANVLGDLRIDVINKIVKEKN" FT CDS complement(873008..873472) FT /transl_table=11 FT /locus_tag="CBO0773" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR009577" FT /db_xref="UniProtKB/TrEMBL:A5HZW6" FT /protein_id="CAL82327.1" FT /translation="MTKYAIVFFMSMVPIVELRGAIPYSQALHLPVLQSFIVAIIGNML FT PMPFIYLFARKVLVWGSDKPITGKFFTWCLEKGEKAGKKLQEKTGKKGLFWALLIFVAI FT PAPGTGAWTGTLAASLLDMDFKTSILAVMLGVLVAGIIMGTASVGLFSFF" FT misc_feature complement(order(873014..873082,873125..873193, FT 873311..873379,873407..873460)) FT /note="4 probable transmembrane helices predicted for FT CBO0773 by TMHMM2.0 at aa 5-22, 32-54, 94-116 and 131-153" FT /inference="protein motif:TMHMM:2.0" FT CDS 873868..874656 FT /transl_table=11 FT /locus_tag="CBO0774" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZW7" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZW7" FT /protein_id="CAL82328.1" FT /translation="MDKSNDVVVSIRDLKMTYGSKEVLKGINLDVNKGEIIGYIGPNGA FT GKSTTVKIMLGLVKGYEGEVKIFGNNISYENVEYKHKIGYVPENGEIYDNLTAYEYITF FT LGEIYGMKLEDVNNKAKKLMSLFGIEEAYHSRISSYSKGMRQKLLIISSLIHNPDILFL FT DEPLSGLDANSVLVFKEVLSKLASEGKTIFYSSHIMEVVEKISSRIILLNNGQIAADGT FT FEELKKKNMEGSLEQIFNQITGFTKHEEIANEFISVLKEV" FT misc_feature 873967..874512 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 183.9, E-value 2.8e-52" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 873988..874011 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 874153..874200 FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT /inference="protein motif:ProSite:PS00225" FT misc_feature 874285..874329 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 874659..876356 FT /transl_table=11 FT /locus_tag="CBO0775" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZW8" FT /protein_id="CAL82329.1" FT /translation="MEDFKILKFVDKFKFIYEKLGVNYASMRTILKLKLLMDNRRVPTI FT YKDKENDNKKNTFKKSLLLYGLMGVFLAVFIFIPSPMVVKMSINIGAIMFLIMSTMIAD FT FSSVLLDIRDKNILNTKPLDPKTINAAKTTHILIYITSISGAIAGPTLIGGLIKYKFKF FT FIIFFFQIILISFFTMFFTAILYYFILKIFDGEKLKDIINYFQIVLSVVLALGYQIIPR FT VFDFTGVNVNFKIKWWSYLVPPVWFGAPYSLIIEHNNGREYVLLSIMCVAIPIIIFGIY FT YKFIVPYFEENLQKLDSSIGKKGSLEEAKGIRNKRYTSIFCRDKIENVFFRFSRNMIST FT ERKLKLKLYPTLAFAVIFPFLMLIGSFSKYESVSQAFNEFSKGNYYFSIYLSVLMLVAS FT IELLSQSEKYKGSWIYIVLPIDNPGKIQKGALKGFIFRYIFPVFLSVCIIFLIICGLRI FT LPDIIVMFFSMLISIVAVQSLYKKELPFYKDFQSNGEGSITTFLVYGGLTGIFFGLHKL FT IRSLIKYSFSIYIYIGVLIIINMILWKKIFNISWKQAQLEDAQESSKT" FT misc_feature order(874842..874910,874920..874988,875061..875129, FT 875157..875225,875259..875318,875361..875429, FT 875448..875516,875700..875768,875805..875873, FT 875958..876026,876045..876098,876141..876200, FT 876219..876287) FT /note="13 probable transmembrane helices predicted for FT CBO0775 by TMHMM2.0 at aa 62-84, 88-110, 135-157, FT 167-189,201-220, 235-257, 264-286, 348-370, 383-405, FT 434-456,463-480, 495-514 and 521-543" FT /inference="protein motif:TMHMM:2.0" FT CDS 876632..877324 FT /transl_table=11 FT /locus_tag="CBO0776" FT /product="two-component response regulator" FT /db_xref="GOA:A5HZW9" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5HZW9" FT /protein_id="CAL82330.1" FT /translation="MSEDIKILVVEDNNDINKLLCDMLRQSEYITKSAYSGTEALIYLK FT EYNWDMVLLDLMLPGMDGKELLSNIRKSKPMPVIIISAKEEKDIKIETLRMGADDYITK FT PFDIDEVSARIDSHLRRYKEFSNITLQNLLKYKEISLNKDTREVFIHNKQIMLTTREFD FT ILQLLMGYPKKVFTKANLFESVWSSEYLCDDNTINVHISNLRNKLSKAGTDNEYIQTIW FT GIGYKLDS" FT misc_feature 876644..877000 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 112.2, E-value 1e-30" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 877085..877315 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 80.8, E-value 2.9e-21" FT /inference="protein motif:Pfam:PF00486" FT CDS 877745..878665 FT /transl_table=11 FT /locus_tag="CBO0777" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZX0" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZX0" FT /protein_id="CAL82331.1" FT /translation="MSEYILNTTNLSKKYKKDFVVNNLNISIKRGEIYGFIGENGAGKT FT TFIRMITGLVAPTNGEIELFSKEKGDELGHVRKRIGALIEKPAFYPYMTAYQNLEAFRI FT EKGIPGKECIDKILKSVGLYEDRNKKLKNFSLGMKQKLALAIALLGDPEFLILDEPING FT LDPMGIKEVRDILKKLNKEKNITMLISSHILGELYQLATCYGIIHKGKLMEQITLKELD FT EKCKRSLSIKVDDVNKAATILETELSTINFKILPDGTIKLYDYVDNLRLVSSTLTKANI FT IIDQIMPNESNLEEYFINLVGGDHK" FT misc_feature 877835..878374 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 164.2, E-value 2.3e-46" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 877856..877879 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 878144..878188 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 878665..879456 FT /transl_table=11 FT /locus_tag="CBO0778" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5HZX1" FT /protein_id="CAL82332.1" FT /translation="MYNLIKFEFYKLKHNRVFRNSLIVISLCVAYTIYLFFSKGNKYMI FT FNSEFGGREYGFWLNNFNDGLNPKAIEFVRSALGFGPIFEILIMFIAGEFIIKEYSYGT FT LKNVLSYGHKREQVYISKMIIMFVVTFILTFLLLFGTVIVAFISGAIKKVSYDEILQAI FT NFILLICIVFTAIASIYTFLCTLIKSKSLIVTIGIIYIYLSSIFIGRIPYQEYTPTFML FT MDIGIVPTTVQNIQHIIMTCIILIIVTSCLGIYIFKKEDIK" FT misc_feature order(878725..878778,878896..878955,879037..879105, FT 879148..879216,879235..879303,879367..879435) FT /note="6 probable transmembrane helices predicted for FT CBO0778 by TMHMM2.0 at aa 21-38, 78-97, 125-147, FT 162-184,191-213 and 235-257" FT /inference="protein motif:TMHMM:2.0" FT CDS 879707..880564 FT /transl_table=11 FT /locus_tag="CBO0779" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5HZX2" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR010499" FT /db_xref="InterPro:IPR011256" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5HZX2" FT /protein_id="CAL82333.1" FT /translation="MGWIEGIGEAINYIEENITEEIPIENIAEKAFVSTFYFQKGFAML FT CDLTVGEYIRQRRLTLAGSELVSTDEKIIDIALKYGYASPDSFTKAFTRFHGVTPTAVR FT KDGAMIKSFAPLKIKFSLEGGYIMDYKIVEKDSFTVMGVSKVFKYDSATTKVPEFWTEH FT YETGKGKYVCGMYGVNIDESMGSDEFEYLIADNYNPSMEIPNGFVTKIIPKYTWAVFAC FT KGAMPKSMIDVSRKIFSEWLPNCKDYEIAAGYNIEMYTNTADYPQGNQDENYYSEIWIP FT VKKK" FT misc_feature 879731..879871 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 35.5, E-value 1.3e-07" FT /inference="protein motif:Pfam:PF00165" FT misc_feature 879887..880021 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 29.4, E-value 8.9e-06" FT /inference="protein motif:Pfam:PF00165" FT CDS 880609..881514 FT /transl_table=11 FT /locus_tag="CBO0780" FT /product="two component sensor kinase" FT /db_xref="GOA:A5HZX3" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR008358" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HZX3" FT /protein_id="CAL82334.1" FT /translation="MIFIIIVLIIFLLFLLSYVFFMKREMKNITIQLNEYNDLKSLKKI FT DSTLFDKEIENLAYSINKHIDINIQSQIKQKRLEEEIRKNIANVSHDLRTPLTSIIGYI FT QMIKKGNLSKEKQIEYIDIAERRAKDLQNLLSNFFELSIIGSPDYYIELQKININNILC FT EVIASFYSSFVDKDITPKIDLPKENIIVIGNEGAIKRVLQNLIVNIIKHSKRDVYISFK FT KENNKAVLATINKCNDITEDNIELIFNRFYKKDDARTNKNGSTGLGLSISKSLMEKMNG FT EIYAEVHGDLLHIFCKWNLK" FT misc_feature 880612..880671 FT /note="1 probable transmembrane helix predicted for CBO0780 FT by TMHMM2.0 at aa 2-21" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 880849..881049 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 65.7, E-value 1.1e-16" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 881185..881511 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 67.6,E-value 2.8e-17" FT /inference="protein motif:Pfam:PF02518" FT repeat_region 881530..881579 FT repeat_region 881580..881629 FT CDS 882469..883464 FT /transl_table=11 FT /locus_tag="CBO0781" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5HZX4" FT /protein_id="CAL82335.1" FT /translation="MELLLKQKVDLMVENYAELKKAFKWEYGIVKHFGAMNSAIKHKKI FT NVQEIEEIKDYIKKQVGLFSQFRGMNLFILSSLLYLESNYKDFFENMQKVYEKMREAGF FT RNSQYLPLASYTIVKEVSMDKWDEKIQRMKSFYSNMKKNHPWLTTADDYVLAAVLATSD FT LDIEKTSEEMEICYKLLNEKAFVKGNSLQSLSQILALGEEDAENKCSRAVSLYNELKSE FT KCKLRYDGLASLGVLTLIASNDIKIVEEVKEVYKYIKEKDGYRIFSIEKSHIVMLAISL FT VADSYIERIQKGLIDITLANSINAIVIAQQQAAIAAACAASAAAASSASS" FT misc_feature 883408..883449 FT /note="PS00099 Thiolases active site." FT /inference="protein motif:ProSite:PS00099" FT CDS 883744..884769 FT /transl_table=11 FT /locus_tag="CBO0782" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZX5" FT /protein_id="CAL82336.1" FT /translation="MVENTNLLNSIFLNQYRTQMNNSNNTNTVDGKTLGNFDQQQAVQQ FT MVFQVVLSQMMNSMGSMSSMNGMSSMNGMDSMGSMNGMGSLVATQALLSSLTNTSSFSL FT DNSLNALSNFNSTMRGAASSLSKGYNNRVDNSFSNLGIRASKYESNLNPAEISDDPGDY FT GGKSYGAWQFSSRTGSLDSFINSLKGNNNDMYYKLTYAKAKDNNTFGENFDAAWKSISS FT QNKDRFLKVQQNYVKVNFYDTVAQSLKSRFDFDVSKKSNALKESLWSTVVQHGVGGATS FT IFSKLNLNNNDSNIINDLYNERQNVNVYFRSSSPEIRQSVYNRFTREKQDMLSMLNEQF FT V" FT CDS 884953..885645 FT /transl_table=11 FT /locus_tag="CBO0783" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5HZX6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5HZX6" FT /protein_id="CAL82337.1" FT /translation="MELLKVKDLCKSYGKGEIKVDALKSINLTINQGEFVAIVGPSGSG FT KSTLLHLLGGVDRPSSGKIILEGTDIYSLKENELAILRRRKIGFIFQFYNLIPVLTAEE FT NIEMPVLLDNKKPDKKYMGELLDILGLRERKNHLPAQLSGGQQQRVSIGRALANKPSII FT FADEPTGNLDSKNSKEIMELLRYSVKKYNQTLVLITHDLNIAKMADRVITIADGEVKGD FT EVNKVEKL" FT misc_feature 885049..885603 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 211.4, E-value 1.4e-60" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 885070..885093 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 885376..885420 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 885632..888298 FT /transl_table=11 FT /locus_tag="CBO0784" FT /product="putative permease" FT /db_xref="GOA:A5HZX7" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5HZX7" FT /protein_id="CAL82338.1" FT /translation="MKSYSEITGRYLKQNKKRTILTIVGIILAISLFSGIGNLFFSMRD FT GLVTNERKNKGNYEVKYFGVNKDKVNKLSNNFEIKDYGVSKDNNFFILKDDKNKENKSA FT MDNKPKIINLDFYDNSMLNNVMTINMKEGRKPKAADEIILEKRAKTKFGKKVGDYIEAN FT NIDPEVLVKSLKVDSKITEQSNLQKLQSNEVKSYKIVGYYEKGLSQTSDLYEARGYLDK FT NSMKKDDNYSFYANLKEKKNKVDIGKKVGSTVGLSEKKEIDGIPEISFNNAVLRLMAEG FT NDTLLNKDTMSVFIFIATLIIVCTVAVIYNAFNISVAERINQFGVLRSIGATPGKIRKL FT VFKEAFIMSIIAIPIGILSGYLGIYTTIKLMSNSERFVFEGLKIGFYKEVILICIVLTL FT ITIILSVLGPAIKASKVSPIDAIRNSSNLKKEKIRRRKGRLIKLIFGIEGAVAYKNIRR FT NNKRFIITVFSLMISLIMFIIITSMTKMTDEVTKQLISSAPFDAVIQTKESMDEKFISE FT IKSKDGIKKVYTPKIRRALVYLEKDILNEKYYEKINKDMPKSEKIKGKDYVCLDQVTYS FT AYDKSSFEEVKNNLADGKIDTEALNNNGVLLINRNEVSKKNGGRVVADITKYKVGDKIR FT IPRTKDKFYPQMGENKKLDLKGEFKQGVEKGDFIELTIVGILNKDIFNISAANNSIGLV FT FSDKCFEKNFGKLPIDAVAINYKNEKAGEKYAGYFEEKAEELQGSYMDLHSVNDQMDSI FT QKQIAVFMYGFIAIITIIGMVNIINTITIGLLLRKSEFATLTAIGMTKSQLNKMVMLEG FT LLHGIFTSVFGSIISYILYNFLLKQSFNFINFDIKFPIDVFITGILGVIAITLLASIIP FT LRRLKKMSIVENIRAKE" FT sig_peptide 885632..885755 FT /locus_tag="CBO0784" FT /note="probabilty 0.858, with cleavage site probability FT 0.373 between residues 42 and 43" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(885689..885757,886508..886576,886664..886732, FT 886796..886864,887015..887083,887921..887989, FT 888068..888136,888179..888247) FT /note="8 probable transmembrane helices predicted for FT CBO0784 by TMHMM2.0 at aa 20-42, 293-315, 345-367,389-411, FT 462-484, 764-786, 813-835 and 850-872" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 886490..886885 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 99.3, E-value 7.7e-27" FT /inference="protein motif:Pfam:PF02687" FT misc_feature 887891..888271 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 93.2, E-value 5.5e-25" FT /inference="protein motif:Pfam:PF02687" FT CDS 888494..888628 FT /transl_table=11 FT /locus_tag="CBO0785" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZX8" FT /protein_id="CAL82339.1" FT /translation="MGEKNMKKEIIEKDKGKNKRGDKKNDDYMAFLGMMATLDLLVIK" FT CDS 888856..889569 FT /transl_table=11 FT /locus_tag="CBO0786" FT /product="two component response regulator" FT /db_xref="GOA:A5HZX9" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:A5HZX9" FT /protein_id="CAL82340.1" FT /translation="MTKILLVEDDMALAIGVEYTLKQENYEVKRAKNLKEARDILREEE FT LDLILLDLMLPDGSGYDFCSEVRKESLIPVIFMTACDEEANVVLGLDMGGDDYITKPVR FT IKELLSRIKAVLRRRSKETESKNNNIKEDNIKNNKIISKDIIIEPLKAKVFKGEEEILL FT TAGEYKLLLILLENKGNVLSRNILLEKIWDVDGSFVDGNTLNVYIKRLREKIEKDPKKP FT KYIETVRGIGYRWSE" FT misc_feature 888859..889215 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 113.3, E-value 4.8e-31" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 889327..889560 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 91.2, E-value 2.2e-24" FT /inference="protein motif:Pfam:PF00486" FT CDS 889723..890985 FT /transl_table=11 FT /locus_tag="CBO0787" FT /product="two component sensor kinase" FT /db_xref="GOA:A5HZY0" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5HZY0" FT /protein_id="CAL82341.1" FT /translation="MLKYFRNPEIKELTFKFSIIFILFATLTTIFIKGELNKLNKDYIN FT QNTLIVGNILSKHPELEEEIILSLKSNEDAIYNEEKNYKIGKNILEKYSYDENLDIYKN FT PVLKNFSINFIYRTIIYFGVAIIIIYIIIYDKFKYFYKKAEVFTKASEEIMDGHFNKFV FT DENREGDFYVLSSKFNLMSNRLEESLLNLKKEKIFLKNIISDISHQLKTPLSSLIMFNE FT LMKDENMPMEDRKNFLKLSDEQLRRMEWLIINLLKIGRLEAGVVEFRRENNPLYVTVNK FT ALAGLSEKAKEKSQQVIVNIDEDVYFKHDMDWTAEAISNIIKNSIEHTDNYGQIKISCE FT ETPISLTISIKDNGEGIPEKLQNKIFERFYKGENSVNPSSIGIGLSLTKSIIESQNGSI FT IVESEMGEGTEFIITFLKTIV" FT misc_feature order(889759..889818,890056..890124) FT /note="2 probable transmembrane helices predicted for FT CBO0787 by TMHMM2.0 at aa 13-32 and 112-134" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 890314..890514 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 53.9, E-value 3.8e-13" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 890647..890976 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 107.7, FT E-value 2.3e-29" FT /inference="protein motif:Pfam:PF02518" FT CDS 891175..891816 FT /transl_table=11 FT /locus_tag="CBO0788" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003741" FT /db_xref="InterPro:IPR009501" FT /db_xref="InterPro:IPR024185" FT /db_xref="UniProtKB/TrEMBL:A5HZY1" FT /protein_id="CAL82342.1" FT /translation="MDKNILEVKKQRIMRTIESLQENNMNGYLVKDKDELIDKIKEIVK FT EGSKVSCGGSMTLFETGVIDHLRSGRYEFLDRYKEGLTPQDIKNIFRESFFADAYFASS FT NAITEKGELYNVDGNGNRVAAMLYGPDKVIIIAGVNKIVRDLDEAIKRNVYVSAPANTK FT RLQRKTPCTKLGYCMDCKSEERICNEYTLIKRQGNKDRIHVIFINEDFGY" FT CDS complement(891907..892095) FT /transl_table=11 FT /locus_tag="CBO0789" FT /product="putative small, acid-soluble spore protein" FT /note="Also similar to CBO1236 (31.7 38d.)." FT /db_xref="GOA:A5HZY2" FT /db_xref="InterPro:IPR012610" FT /db_xref="UniProtKB/Swiss-Prot:A5HZY2" FT /protein_id="CAL82343.1" FT /translation="MDASRASQLINSRETDVYCKSEPVIIRSVDEYSKMATVESLNNGT FT TIMAPLNDIRDSGVINH" FT CDS 892425..893204 FT /transl_table=11 FT /locus_tag="CBO0790" FT /product="putative membrane protein" FT /db_xref="GOA:A5HZY3" FT /db_xref="InterPro:IPR009825" FT /db_xref="UniProtKB/TrEMBL:A5HZY3" FT /protein_id="CAL82344.1" FT /translation="MKKEIQVKTMVLCGLFIAAAIILRFFSIMVPIAGAGAMRISFAGI FT FIKMPAVLFGGAIGGVVSGVVDILAYIIKPMGAYIPFLTLTSILSGILTGIIWFKIKNV FT HIDKIEKYYPIFFMVLGSLAGAIHLMTLLLDKSFSFKIMNILGKKYIFVLSAIEIITIF FT SLIVFIINIKLKDNSTVKHIYEDYMKMILAIGIPGIIVCTLNTYILLMFIPGLQGKSFM FT FLWIPRIVEEVFMIVFESYAVSLLLRVYESVVLKISN" FT sig_peptide 892425..892524 FT /locus_tag="CBO0790" FT /note="probabilty 0.999, with cleavage site probability FT 0.418 between residues 34 and 35" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(892467..892535,892572..892640,892653..892721, FT 892758..892826,892869..892937,892995..893063, FT 893121..893189) FT /note="7 probable transmembrane helices predicted for FT CBO0790 by TMHMM2.0 at aa 15-37, 50-72, 77-99, FT 112-134,149-171, 191-213 and 233-255" FT /inference="protein motif:TMHMM:2.0" FT repeat_region complement(893279..893328) FT repeat_region complement(893414..893451) FT repeat_region 893455..893484 FT /rpt_family="CB.59" FT /rpt_type=DIRECT FT /rpt_unit_seq="gaagctagcataactctttaaagataattt" FT /inference="ab initio prediction:REPuter" FT repeat_region 893592..893653 FT repeat_region complement(893617..893649) FT CDS 893870..894667 FT /transl_table=11 FT /gene="dapB" FT /locus_tag="CBO0791" FT /product="dihydrodipicolinate reductase" FT /EC_number="1.3.1.26" FT /db_xref="GOA:A5HZY4" FT /db_xref="InterPro:IPR000846" FT /db_xref="InterPro:IPR011770" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR022663" FT /db_xref="InterPro:IPR022664" FT /db_xref="InterPro:IPR023940" FT /db_xref="UniProtKB/TrEMBL:A5HZY4" FT /protein_id="CAL82345.1" FT /translation="MKIIVIGPRGKMGSLVTKSCYTNENIELVAAVAPKERDYIGQDLG FT IVANLGKNIDCKVVDNLENVIDKCDCIIDFTDPETSMDVFEKALKSKKSVVCGTTGFSE FT EEINRINEISKEIPLVLAGNTSMVVNLMYKLVELAANTIGNMSDIEIIEMHDRYKKDAP FT SGTSLEIGEVLAKTFNKELKELAQFGRCGKGEREEGKIAYHSLRAGDISSSHTVMFGLM FT GERLEITHHAHNWECFANGGCQAALFLRDKKPGIYSMKDVLGL" FT misc_feature 893870..894244 FT /note="Pfam match to entry PF01113 FT DapB_N,Dihydrodipicolinate reductase, N-terminus, score FT 111.8,E-value 1.4e-30" FT /inference="protein motif:Pfam:PF01113" FT misc_feature 894251..894661 FT /note="Pfam match to entry PF05173 FT DapB_C,Dihydrodipicolinate reductase, C-terminus, score FT 169.5,E-value 5.7e-48" FT /inference="protein motif:Pfam:PF05173" FT CDS 894689..895528 FT /transl_table=11 FT /gene="sseA" FT /locus_tag="CBO0792" FT /product="putative 3-mercaptopyruvate sulfurtransferase" FT /EC_number="2.8.1.2" FT /db_xref="GOA:A5HZY5" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:A5HZY5" FT /protein_id="CAL82346.1" FT /translation="MKNFVSTKWLQDHLEDENIVIVDCRGDLLKDSYGEEIYKKGHIKN FT AVFADLKEVMSSEEKEHGGRNPLPDIEDFKRSIEKLGINKNTLVVAYDELKIAGAARFC FT WMLRYVGHTNNYVLDGGINKWITENRKLYIEENNSKEKFDIKNEDFNISLNEGIKADVN FT YIKDNMKKDLILVDSRTNIRYKGIEEPIDKKAGHIPGAKNVYWKDMLKEDGTVDENKVR FT ENFLSLKNYSNIAAYCGSGIDATFNFLLLDEVGIKARVYAGSWSDWITYKDNPIDHK" FT misc_feature 894704..895072 FT /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like FT domain, score 50.8, E-value 3.1e-12" FT /inference="protein motif:Pfam:PF00581" FT misc_feature 895169..895501 FT /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like FT domain, score 55.5, E-value 1.2e-13" FT /inference="protein motif:Pfam:PF00581" FT CDS complement(896036..896905) FT /transl_table=11 FT /locus_tag="CBO0793" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZY6" FT /protein_id="CAL82347.1" FT /translation="MHDKNIHNYCNNKYKKIIKKYKIYNKINIDKTYIQFSLTQIKQML FT VYYYANSKGFVSLISKKRIARMIGCCEKNIDINNKLFLDLGLILISSTINNKFSLIIKN FT YSKHYSKNNTRYINLATLHINNVNALRIAPQDILKHDINTLLDQETYFSINNMKTFLPD FT YINCKSAIEKVINKLNRNTIAMLFNNSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYI FT TENNIKLNNLSYSISNIIKLAFEYGYDIIQLILGEIKDIAPTIFNVGRYIRYKIKRYIY FT MNEPFFTV" FT CDS complement(897205..897984) FT /transl_table=11 FT /locus_tag="CBO0794" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZY7" FT /protein_id="CAL82348.1" FT /translation="MKYFTYNSIFVTYFLCLKSKTNKQINITFNLDFIYNICTIISDKW FT NNNLNFIYMEYPRLLLDHSLVANGSEKVKVQKQTIIQQNHSNKDVKYKYNDYVPKDRIA FT RILIPESNIDTKQSRLIDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCSKII FT RSYEDLRNRIAKMTLLKFNFFRIDNTSGIPDAVYGIFSSYEYLDKSQNKVKVYVDSILY FT DKILKNQVYTIYNDKINQFEISDLFSSKNTSDILPVI" FT CDS complement(898030..898320) FT /transl_table=11 FT /locus_tag="CBO0795" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZY8" FT /protein_id="CAL82349.1" FT /translation="MNTKEENLKLLIKDIIQREFIVAELTKISDMDLHKTKHTFIAPNK FT VNKLKRYNLQQIKQTKKRWYNSLFKKKKTNPFEIEIANNISLYGPGVFFYL" FT CDS 898812..898928 FT /transl_table=11 FT /locus_tag="CBO0796" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZY9" FT /protein_id="CAL82350.1" FT /translation="MGKRGEVLKVNKITIVGEFMHFKISYIIATKLVYNRKC" FT CDS 898947..899204 FT /transl_table=11 FT /locus_tag="CBO0797" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZZ0" FT /protein_id="CAL82351.1" FT /translation="MKIKHTKVNEYYNYLKESFANVNLSEEHRMDIYKRIEIIEALVSL FT YEQKYEFDDQIIEDFKLKYRPVFSEKLKNIQKNLEKTIIK" FT CDS 899498..900919 FT /transl_table=11 FT /locus_tag="CBO0798" FT /product="flagellin" FT /db_xref="GOA:A5HZZ1" FT /db_xref="InterPro:IPR001029" FT /db_xref="UniProtKB/TrEMBL:A5HZZ1" FT /protein_id="CAL82352.1" FT /translation="MNKLSLINNINYFNKLATINSMKLSTNKRVNVAADSPSEIGRISR FT INTSVRSRNIVVKNIQEGISLLQVKENAVNDLKEMGTRLKELSLMYKNNTLNKDDKKNI FT EYEAKSLLENMSFTIKNTKFNRKNLFNGEKLNIQGSTYNTDIKLMDFKVSKGDTIFIGN FT NKSSNESHTIKVSDNEIDTILKKYNLEKADKIVLYELEMVEEHNIKTVFTSKYGYKNNA FT NTDIVNVSNNANKMFSINGTINDNSKVKGYLQEKDNKLIGNININDKGYNIQLDAIMED FT ALKTNLNSIKTTIINKNDHTFRGNTSIIDIRDNSGMTYIFKEITVDEFKEIIANDKSNN FT KNKQIVFELTNNKKCALDINSKDVNLYISDEEYNSFDISDILNSPNIIGEKVLSELKNY FT QNYIGIKTNELEYKLNFEQNNQILEETTLDKIQSIDIAKELVEKSKNEILVNTNAVLLQ FT SSLENDKNYILTLLR" FT misc_feature 899558..899974 FT /note="Pfam match to entry PF00669 Flagellin_N, Bacterial FT flagellin N-terminus, score 17.7, E-value 8.9e-06" FT /inference="protein motif:Pfam:PF00669" FT CDS 900996..901157 FT /transl_table=11 FT /locus_tag="CBO0799" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5HZZ2" FT /protein_id="CAL82353.1" FT /translation="MYRKLIPFLAAPNLSVKKINLLEILLISDIKGLINNINLKQIFKI FT HKLISFNI" FT CDS complement(901433..901786) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0800" FT /product="putative transposase (partial)" FT /note="Partial CDS. Similar to the N-terminal regions of FT several transposases, including Lactobacillus johnsonii FT insertion element IS1223 hypothetical 20.7 kDa protein FT SWALL:YI3A_LACJO (SWALL:Q48585) (177 aa) fasta scores: E(): FT 0.0014, 40.69 38d in 86 aa, and to Pseudomonas syringae FT ISpsy8, transposase orfa pspto0123 or pspto0449 or FT pspto0515 or pspto5065 or pspto5508 SWALL:Q877K7 FT (EMBL:AE016856) (171 aa) fasta scores: E(): 0.003, 34.44 id FT in 90 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82354.1" FT misc_feature complement(901655..901720) FT /note="Predicted helix-turn-helix motif with score FT 1032.000, SD 2.70 at aa 23-44, sequence FT VSFGVLAQECNINKQDIQKCFV" FT CDS complement(901881..903761) FT /transl_table=11 FT /gene="ha70" FT /locus_tag="CBO0801" FT /product="hemagglutinin component of the neurotoxin FT complex" FT /note="previously sequenced in Clostridium botulinum as FT Ha70 SWALL:Q8KHU9 (EMBL:AF461538) (626 aa) fasta scores: FT E(): 0, 100 38d in 626 aa" FT /db_xref="GOA:A5HZZ4" FT /db_xref="InterPro:IPR003897" FT /db_xref="UniProtKB/TrEMBL:A5HZZ4" FT /protein_id="CAL82355.1" FT /translation="MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVRRGDGWILSRQNQ FT ILGGSVISNGSTGIVGDLRVNDNAIPYYYPTPSFNEEYIKNNIQTVFTNFTEANQIPIG FT FEFSKTAPSNKNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPGEKI FT NKDFYFLTNDKCILNEQFLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKG FT DGYIRTNDKDLIGTLLIEAGSSGSIIQPRLRNTTRPLFTTSNDTKFSQQYTEERLKDAF FT NVQLFNTSTSLFKFVEEAPSDKNICIKAYNTYEKYELIDYQNGSIVNKAEYYLPSLGYC FT EVTNAPSPESEVVKMQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPG FT IVNNNPFYILFTVNTTGIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYI FT TGFDSPNAKSYLVVLLNKDKNYYIRVPQTSSNIENQIQFKREEGDLRNLMNSSVNIIDN FT LNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNIRLYTSYNQGIGTLFRVTETID FT GYNLINIQQNLHLLNNTNSIRLLNGAIYILKVEVTELNNYNIRLHIDITN" FT misc_feature complement(902484..903074) FT /note="Pfam match to entry PF03505 Clenterotox,Clostridium FT enterotoxin, score 473.1, E-value 2.3e-139" FT /inference="protein motif:Pfam:PF03505" FT misc_feature complement(903294..903527) FT /note="Pfam match to entry PF03505 Clenterotox,Clostridium FT enterotoxin, score 24.9, E-value 8.3e-07" FT /inference="protein motif:Pfam:PF03505" FT CDS complement(903775..904215) FT /transl_table=11 FT /gene="ha17" FT /gene_synonym="ha-17" FT /locus_tag="CBO0802" FT /product="hemagglutinin component of the neurotoxin FT complex" FT /note="Previously sequenced in Clostridium as botulinum FT Ha17 or Ha-17 SWALL:Q45878 (EMBL:L42537) (146 aa) fasta FT scores: E(): 4e-58, 100 38d in 146 aa" FT /db_xref="InterPro:IPR008903" FT /db_xref="InterPro:IPR008997" FT /db_xref="UniProtKB/TrEMBL:A5HZZ5" FT /protein_id="CAL82356.1" FT /translation="MSVERTFLPNGNYNIKSIFSGSLYLNPVSKSLTFSNESSANNQKW FT NVEYMAENRCFKISNVAEPNKYLSYDNFGFISLDSLSNRCYWFPIKIAVNTYIMLSLNK FT VNELDYAWDIYDTNENILSQPLLLLPNFDIYNSNQMFKLEKI" FT misc_feature complement(903778..904215) FT /note="Pfam match to entry PF05588 FT botulinum_HA-17,Clostridium botulinum HA-17 protein, score FT 391.7, E-value 7.4e-115" FT /inference="protein motif:Pfam:PF05588" FT CDS complement(904278..905159) FT /transl_table=11 FT /gene="ha33" FT /gene_synonym="ha-33" FT /locus_tag="CBO0803" FT /product="hemagglutinin component of the neurotoxin FT complex" FT /note="Previously sequenced in Clostridium botulinum as FT Ha-33 protein Ha-33 or Ha33 SWALL:Q45871 (EMBL:X79104) (293 FT aa) fasta scores: E(): 4.2e-113, 100 38d in 293 aa" FT /db_xref="InterPro:IPR000772" FT /db_xref="InterPro:IPR008997" FT /db_xref="UniProtKB/TrEMBL:A5HZZ6" FT /protein_id="CAL82357.1" FT /translation="MEHYSVIQNSLNDKIVTISCKADTNLFFYQVAGNVSLFQQTRNYL FT ERWRLIYDSNKAAYKIKSMDIHNTNLVLTWNAPTHNISTQQDSNADNQYWLLLKDIGNN FT SFIIASYKNPNLVLYADTVARNLKLSTLNNSNYIKFIIEDYIISDLNNFTCKISPILDL FT NKVVQQVDVTNLNVNLYTWDYGRNQKWTIRYNEEKAAYQFFNTILSNGVLTWIFSNGNT FT VRVSSSNDQNNDAQYWLINPVSDTDETYTITNLRDTTKALDLYGGQTANGTAIQVFNYH FT GDDNQKWNIRNP" FT misc_feature complement(904281..904412) FT /note="Pfam match to entry PF00652 Ricin_B_lectin, QXW FT lectin repeat, score 55.4, E-value 1.3e-13" FT /inference="protein motif:Pfam:PF00652" FT misc_feature complement(904431..904559) FT /note="Pfam match to entry PF00652 Ricin_B_lectin, QXW FT lectin repeat, score 15.9, E-value 0.044" FT /inference="protein motif:Pfam:PF00652" FT misc_feature complement(904575..904697) FT /note="Pfam match to entry PF00652 Ricin_B_lectin, QXW FT lectin repeat, score 22.4, E-value 0.0011" FT /inference="protein motif:Pfam:PF00652" FT misc_feature complement(904725..904844) FT /note="Pfam match to entry PF00652 Ricin_B_lectin, QXW FT lectin repeat, score 2.0, E-value 4.3" FT /inference="protein motif:Pfam:PF00652" FT misc_feature complement(904860..904985) FT /note="Pfam match to entry PF00652 Ricin_B_lectin, QXW FT lectin repeat, score 19.8, E-value 0.0067" FT /inference="protein motif:Pfam:PF00652" FT misc_feature complement(905197..905238) FT /note="BotR-binding site" FT CDS 905386..905922 FT /transl_table=11 FT /gene="botR" FT /gene_synonym="p-21" FT /locus_tag="CBO0804" FT /product="RNA polymerase ECF-type sigma factor" FT /note="Previously sequenced as Clostridium botulinum FT hypothetical protein p-21 or botR SWALL:Q57176 FT (EMBL:X79104) (178 aa) fasta scores: E(): 9.6e-61, 100 38d FT in 178 aa" FT /db_xref="GOA:A5HZZ7" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR017622" FT /db_xref="UniProtKB/TrEMBL:A5HZZ7" FT /protein_id="CAL82358.1" FT /translation="MNKLFLQIKMLKNDNREFQEIFKHFEKTINIFTRKYNIYDNYNDI FT LYHLWYTLKKVDLSNFNTQNDLERYISRTLKRYCLDICNKRKIDKKIIYNSEIVDKKLS FT LIANSYSSYLEFEFNDLISILPDDQKKIIYMKFVEDIKEIDIAKKLNISRQSVYKNKIM FT ALERLEPILKKLINM" FT misc_feature 905806..905871 FT /note="Predicted helix-turn-helix motif with score FT 1275.000, SD 3.53 at aa 144-165, sequence FT IKEIDIAKKLNISRQSVYKNKI" FT misc_feature 905939..905980 FT /note="BotR-binding site" FT CDS 906084..909665 FT /transl_table=11 FT /gene="ntnH" FT /gene_synonym="ant" FT /locus_tag="CBO0805" FT /product="type A progenitor toxin nontoxic-nonha" FT /note="Previously sequenced in Clostridium botulinum as FT type A progenitor toxin nontoxic-nonha Ant or NtnH FT SWALL:Q45914 (EMBL:D67030) (1193 aa) fasta scores: E(): FT 0,100 38d in 1193 aa" FT /db_xref="GOA:A5HZZ8" FT /db_xref="InterPro:IPR000395" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR012928" FT /db_xref="InterPro:IPR013320" FT /db_xref="InterPro:IPR013677" FT /db_xref="UniProtKB/TrEMBL:A5HZZ8" FT /protein_id="CAL82359.1" FT /translation="MNINDNLSINSPVDNKNVVVVRARKTDTVFKAFKVAPNIWVAPER FT YYGESLSIDEEYKVDGGIYDSNFLSQDSEKDKFLQAIITLLKRINSTNAGEKLLSLIST FT AIPFPYGYIGGGYYAPNMITFGSAPKSNKKLNSLISSTIPFPYAGYRETNYLSSEDNKS FT FYASNIVIFGPGANIVENNTVFYKKEDAENGMGTMTEIWFQPFLTYKYDEFYIDPAIEL FT IKCLIKSLYFLYGIKPSDDLVIPYRLRSELENIEYSQLNIVDLLVSGGIDPKFINTDPY FT WFTDNYFSNAKKVFEDHRNIYETEIEGNNAIGNDIKLRLKQKFRININDIWELNLNYFS FT KEFSIMMPDRFNNALKHFYRKQYYKIDYPENYSINGFVNGQINAQLSLSDRNQDIINKP FT EEIINLLNGNNVSLMRSNIYGDGLKSTVDDFYSNYKIPYNRAYEYHFNNSNDSSLDNVN FT IGVIDNIPEIIDVNPYKENCDKFSPVQKITSTREINTNIPWPINYLQAQNTNNEKFSLS FT SDFVEVVSSKDKSLVYSFLSNVMFYLDSIKDNSPIDTDKKYYLWLREIFRNYSFDITAT FT QEINTNCGINKVVTWFGKALNILNTSDSFVEEFQNLGAISLINKKENLSMPIIESYEIP FT NDMLGLPLNDLNEKLFNIYSKNTAYFKKIYYNFLDQWWTQYYSQYFDLICMAKRSVLAQ FT ETLIKRIIQKKLSYLIGNSNISSDNLALMNLTTTNTLRDISNESQIAMNNVDSFLNNAA FT ICVFESNIYPKFISFMEQCINNINIKTKEFIQKCTNINEDEKLQLINQNVFNSLDFEFL FT NIQNMKSLFSSETALLIKEETWPYELVLYAFKEPGNNVIGDASGKNTSIEYSKDIGLVY FT GINSDALYLNGSNQSISFSNDFFENGLTNSFSIYFWLRNLGKDTIKSKLIGSKEDNCGW FT EIYFQDTGLVFNMIDSNGNEKNIYLSDVSNNSWHYITISVDRLKEQLLIFIDDNLVANE FT SIKEILNIYSSNIISLLSENNPSYIEGLTILNKPTTSQEVLSNYFEVLNNSYIRDSNEE FT RLEYNKTYQLYNYVFSDKPICEVKQNNNIYLTINNTNNLNLQASKFKLLSINPNKQYVQ FT KLDEVIISVLDNMEKYIDISEDNRLQLIDNKNNAKKMIISNDIFISNCLTLSYNGKYIC FT LSMKDENHNWMICNNDMSKYLYLWSFK" FT misc_feature 906084..907274 FT /note="Pfam match to entry PF01742 FT Peptidase_M27,Clostridial neurotoxin zinc protease, score FT 702.1, E-value 2.7e-208" FT /inference="protein motif:Pfam:PF01742" FT CDS 909709..913599 FT /transl_table=11 FT /gene="botA" FT /gene_synonym="bna" FT /gene_synonym="atx" FT /locus_tag="CBO0806" FT /product="botulinum neurotoxin type A precursor" FT /EC_number="3.4.24.69" FT /note="Similar to Clostridium botulinum botulinum FT neurotoxin type A precursor BotA or Bna or Atx FT SWALL:BXA1_CLOBO (SWALL:P10845) (1295 aa) fasta scores: FT E(): 0, 99.92 38d in 1295 aa" FT /db_xref="GOA:A5HZZ9" FT /db_xref="InterPro:IPR000395" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR011065" FT /db_xref="InterPro:IPR012500" FT /db_xref="InterPro:IPR012928" FT /db_xref="InterPro:IPR013104" FT /db_xref="InterPro:IPR013320" FT /db_xref="PDB:1XTF" FT /db_xref="PDB:1XTG" FT /db_xref="PDB:2W2D" FT /db_xref="PDB:3K3Q" FT /db_xref="PDB:3QIX" FT /db_xref="PDB:3QIY" FT /db_xref="PDB:3QIZ" FT /db_xref="PDB:3QJ0" FT /db_xref="UniProtKB/Swiss-Prot:A5HZZ9" FT /protein_id="CAL82360.1" FT /translation="MPFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHNKIWVI FT PERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLG FT RMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQF FT ECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLA FT HELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENE FT FRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDK FT LYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAA FT NFNGQNTEINNMNFTKLKNFTGLFEFYKLLCVRGIITSKTKSLDKGYNKALNDLCIKVN FT NWDLFFSPSEDNFTNDLNKGEEITSDTNIEAAEENISLDLIQQYYLTFNFDNEPENISI FT ENLSSDIIGQLELMPNIERFPNGKKYELDKYTMFHYLRAQEFEHGKSRIALTNSVNEAL FT LNPSRVYTFFSSDYVKKVNKATEAAMFLGWVEQLVYDFTDETSEVSTTDKIADITIIIP FT YIGPALNIGNMLYKDDFVGALIFSGAVILLEFIPEIAIPVLGTFALVSYIANKVLTVQT FT IDNALSKRNEKWDEVYKYIVTNWLAKVNTQIDLIRKKMKEALENQAEATKAIINYQYNQ FT YTEEEKNNINFNIDDLSSKLNESINKAMININKFLNQCSVSYLMNSMIPYGVKRLEDFD FT ASLKDALLKYIYDNRGTLIGQVDRLKDKVNNTLSTDIPFQLSKYVDNQRLLSTFTEYIK FT NIINTSILNLRYESNHLIDLSRYASKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKN FT AIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSLNYGEIIWTLQD FT TQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLGNIH FT ASNNIMFKLDGCRDTHRYIWIKYFNLFDKELNEKEIKDLYDNQSNSGILKDFWGDYLQY FT DKPYYMLNLYDPNKYVDVNNVGIRGYMYLKGPRGSVMTTNIYLNSSLYRGTKFIIKKYA FT SGNKDNIVRNNDRVYINVVVKNKEYRLATNASQAGVEKILSALEIPDVGNLSQVVVMKS FT KNDQGITNKCKMNLQDNNGNDIGFIGFHQFNNIAKLVASNWYNRQIERSSRTLGCSWEF FT IPVDDGWGERPL" FT misc_feature 909712..910938 FT /note="Pfam match to entry PF01742 FT Peptidase_M27,Clostridial neurotoxin zinc protease, score FT 780.1, E-value 9e-232" FT /inference="protein motif:Pfam:PF01742" FT misc_feature 910366..910395 FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS complement(join(913739..913849,913853..914422)) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0807" FT /product="transposase (pseudogene)" FT /note="Pseudogene. This CDS contains an in-frame TAA stop FT codon. Similar to Escherichia coli putative transposase FT insk for insertion sequence element is150 insk or b3558 FT SWALL:INSK_ECOLI (SWALL:P19769) (283 aa) fasta scores: E(): FT 5.5e-29, 46.15 38d in 221 aa" FT /db_xref="PSEUDO:CAL82361.1" FT /inference="protein motif:ProSite:Pseudog" FT misc_feature complement(913757..913849) FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 17.5, E-value 0.00016" FT /inference="protein motif:Pfam:PF00665" FT misc_feature complement(913853..914236) FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 50.2, E-value 4.8e-12" FT /inference="protein motif:Pfam:PF00665" FT CDS join(914456..914545,914545..914745) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0809" FT /product="putative transposase (pseudogene)" FT /note="Pseudogene. This CDS appears to have a frameshift FT mutation around codon 30. Similar to Lactobacillus casei FT transposable element isl1 SWALL:P71428 (EMBL:X02734) (93 FT aa) fasta scores: E(): 0.00034, 34.73 38d in 95 aa" FT /db_xref="PSEUDO:CAL82362.1" FT /inference="protein motif:ProSite:Pseudog" FT misc_feature 914459..914548 FT /note="Pfam match to entry PF01527 FT Transposase_8,Transposase, score 28.5, E-value 8.3e-08" FT /inference="protein motif:Pfam:PF01527" FT CDS 914877..915599 FT /transl_table=11 FT /locus_tag="CBO0810" FT /product="putative transposase for insertion sequence FT element IS904" FT /db_xref="GOA:A5I002" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:A5I002" FT /protein_id="CAL82363.1" FT /translation="MLKKEIQQIFVENKERYGSIRIAKVLNNRGVHISRKRVSRLMEEL FT KLYPKGIRYRYKRYNQKSNAIERPNLLNQMFRTDKNNKIWVGDITYIPNKKGSLYLAVF FT LDIYSRKVVGWSMSKKIKDTLVIDAFTQAYGKEHPSEGLIVHTDQGSQFTDGIFRVLLS FT KYSSVHSNSRKGNPYDNAVMESFYRTIKRELIQDAKYETPEQAEKEIFKYIELYYNTKR FT IHSSLGYISPAQFENLNS" FT misc_feature 915105..915587 FT /note="Pfam match to entry PF00665 rve, Integrase core FT domain, score 170.9, E-value 2.3e-48" FT /inference="protein motif:Pfam:PF00665" FT CDS 915784..917181 FT /transl_table=11 FT /locus_tag="CBO0811" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I003" FT /protein_id="CAL82364.1" FT /translation="MHFCRKCGSKLQKNSKRCSTCGSELEKIHKEEISSITDRGTLLHN FT EIFNDEHILKHKEEPLEIIKNFNLNKKIKENKIFLIIILILIIVGIPLMKNPIKNFFIR FT KDAANWLVYAVDNYKESDTLDTVSDFKIKSKLQPQESMEYKYIENIIEQCTLRVNNKVD FT KKTNERYSKVSLIHKKGNILNGEIYSNKEYIAISMPQLYKDIMYIKWEDINKLINNKEN FT NDVSETIDSKNYENVLNIKKSKYYDKVNEDYKEFFNKVMDDYVAKGDTVDINIKDKENT FT VKCDEIVVHLDNEGIIKVLNAFFEKVSKDENLKLLVREKVFEFLSIAQNNEDLNKFNLS FT KEDVDNIKREFNSEYDSFMSELSYIEKADKKGFNGKINSLTKVRVDSKNYIRGFKSQVS FT IENKKTSFNFISDTVVNSINSKLHIKKISKEGAKDISKLTPEDRDNVVKEAGNNIGKIM FT FPKLNIE" FT misc_feature 916012..916065 FT /note="1 probable transmembrane helix predicted for CBO0811 FT by TMHMM2.0 at aa 77-94" FT /inference="protein motif:TMHMM:2.0" FT CDS 917517..918686 FT /transl_table=11 FT /locus_tag="CBO0812" FT /product="putative amidohydrolase" FT /db_xref="GOA:A5I004" FT /db_xref="InterPro:IPR006680" FT /db_xref="UniProtKB/TrEMBL:A5I004" FT /protein_id="CAL82365.1" FT /translation="MLLIKNGKVLTMTDKKHVNDCILINNGKIEKIAKKIQTDNESIEV FT IDAKGGWVMPGIIDAHCHIGIMEEGIKFEGMDLNEYSSAITPHLRAIDGINPRDLAFQS FT AIEAGITTVMTGMGSSNPIGGQFAIIKTYGKSVDEMVVKAPAALKIAFGENPKSIFGKK FT GSMPITRMGTAALIRETLYKAKNYMNRKEEALKEGKIFDIDIKMESIIPVLKKEIPLKA FT HAHRSDDILTAIRIAKEFDLKLTIDHGTEAHLVADYIKESGFPVIAGPNMNFRGKVETK FT NRSYNTTKILQEKEILYAMITDHPVVPIEFLPMSAALAVKNGLKEEDALKAITINPAKI FT LGIEHRVGALDVGKEADICIYNDNPLNMNSKNMYTIISGNIVYDFNKDL" FT misc_feature 917670..918602 FT /note="Pfam match to entry PF01979 FT Amidohydro_1,Amidohydrolase family, score -4.3, E-value FT 0.0005" FT /inference="protein motif:Pfam:PF01979" FT CDS 919252..920553 FT /transl_table=11 FT /locus_tag="CBO0813" FT /product="branched-chain amino acid transport system FT carrier II protein" FT /note="This CDS is also similar to CBO0814 (78.837 identity FT in 430 aa overlap)." FT /note="Highly similar to adjacent CDS, CBO0814, (78.8 id)" FT /db_xref="GOA:A5I005" FT /db_xref="InterPro:IPR004685" FT /db_xref="UniProtKB/TrEMBL:A5I005" FT /protein_id="CAL82366.1" FT /translation="MKKTSAKDFIVIGFALFAMFFGAGNLIFPPFMGKLVGDQAPAAII FT GFLITGVGLPLTGIIACAKINGTFSDISGRVGKIFAIISTTALILAIGPMLAIPRTAAT FT TYELAIHPIFPGVAPVVAVIIYFLVCLAFVLRPSGIVDSIGKVLTPALLVMLAIIIIKG FT LVSPLGPTISTGFKGAFSKSLLEGYQTMDAMASVIFASIIITAVRAKGYTEKKDIVSLT FT IKSGIVAAVGLAFVYGGLMILGSHTSQIIPGEIGRSALVVEIVKRLLGNAGTVILGLAV FT GLACLTTAIGLISTGAEYFSSLTKGKVPYNVFAIIISAVSALLGTGGVDKIVKFSVPIL FT QVLYPIVIVLIAITLAGKLVKNNTVVRITVYTTLVVSFIDTINILTNGNVAFIKSLLGI FT IPLSNAGFSWLIPAVIAFIIGTVAFGKKQDIADA" FT sig_peptide 919252..919360 FT /locus_tag="CBO0813" FT /note="probabilty 0.997, with cleavage site probability FT 0.625 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature 919264..920532 FT /note="Pfam match to entry PF05525 FT Branch_AA_trans,Branched-chain amino acid transport FT protein, score 541.5,E-value 6.3e-160" FT /inference="protein motif:Pfam:PF05525" FT misc_feature order(919276..919344,919372..919440,919477..919545, FT 919588..919656,919693..919761,919804..919872, FT 919909..919977,920071..920139,920173..920226, FT 920254..920322,920341..920409,920467..920526) FT /note="12 probable transmembrane helices predicted for FT CBO0813 by TMHMM2.0 at aa 9-31, 41-63, 76-98, FT 113-135,148-170, 185-207, 220-242, 274-296, 308-325, FT 335-357,364-386 and 406-425" FT /inference="protein motif:TMHMM:2.0" FT CDS 920704..922020 FT /transl_table=11 FT /locus_tag="CBO0814" FT /product="branched chain amino acid transport system FT carrier II protein" FT /note="This CDS is also similar to CBO0813 (78.837 identity FT in 430 aa overlap)." FT /note="Highly similar to adjacent CDS, CBO0813, (78.8 id)" FT /db_xref="GOA:A5I006" FT /db_xref="InterPro:IPR004685" FT /db_xref="UniProtKB/TrEMBL:A5I006" FT /protein_id="CAL82367.1" FT /translation="MKKTSSKDFIVIGFALFAMFFGAGNLIFPPFIGNLVGDKAPIAII FT GFLITGVGLPLSAIIACAKINGTFSDISGRVGKYFSVISTTALILAIGPMLCIPRTAAT FT TYELTVQPLFPSIGPLVSAIIYFAICLAFVLRPSGIVDSIGKVLTPCLLLMLAIIIIKG FT LISPLGPVVSTNFKGVFSTSLLEGYQTMDTMGSVIYASIILASVRSKGYTDEKDVISVT FT IKSGIVAIAGLGLVYGGLMVLGSQTSQIISGEEIGRTALVIEIVKRDLGNIGIVILGIA FT VGLACLTTAIGLLSTGAEYLSKLTKGKVSYNAFAIIISVVSGILGIGGVDKIIKFSVPI FT LQILYPIVIVLIVITLLGKVVKNDSVVKFTVYITLIVSMIDTMNTLTGEKVAFIKSILG FT IIPLSSVGFAWLIPAIIAFIIGTIAFGNKQEKNPQAADF" FT sig_peptide 920704..920812 FT /locus_tag="CBO0814" FT /note="probabilty 0.997, with cleavage site probability FT 0.548 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature 920716..921987 FT /note="Pfam match to entry PF05525 FT Branch_AA_trans,Branched-chain amino acid transport FT protein, score 517.0,E-value 1.5e-152" FT /inference="protein motif:Pfam:PF05525" FT misc_feature order(920728..920796,920824..920892,920929..920997, FT 921040..921108,921142..921210,921253..921321, FT 921355..921423,921520..921588,921625..921693, FT 921721..921777,921796..921864,921892..921960) FT /note="12 probable transmembrane helices predicted for FT CBO0814 by TMHMM2.0 at aa 9-31, 41-63, 76-98, FT 113-135,147-169, 184-206, 218-240, 273-295, 308-330, FT 340-358,365-387 and 397-419" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(922099..924579) FT /transl_table=11 FT /locus_tag="CBO0815" FT /product="putative bifunctional protein [include FT methyl-accepting chemotaxis protein and an extracellular FT solute-binding protein]" FT /note="Similar over its C-terminal region to several FT including Oceanobacillus iheyensis oligopeptide ABC FT transporter oligopeptide-binding protein ob2775 FT SWALL:Q8EMR6 (EMBL:AP004602) (524 aa) fasta scores: E(): FT 1.8e-24, 25.29 38d in 518 aa" FT /db_xref="GOA:A5I007" FT /db_xref="InterPro:IPR000914" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR023765" FT /db_xref="UniProtKB/TrEMBL:A5I007" FT /protein_id="CAL82368.1" FT /translation="MFNFKLKRSSIDKNINSLNEKNIEKPCNIAIYEDNLKVLTNNQRK FT IVDKLDKKIIETDSVTELLIKMTKDISNYVEMEMDSISKVTGEISNYSAIAEEVFSSTE FT NSKQISESTMEVAKEGNEAALNSIEAMKEIEGSMLYSKTVVKDLSTKALDINNMLDVIK FT DIANNTNLLSLNASIEAARAGEAGKGFAVVAHEVKKLAERSMDSVDFIGNNIKEINISI FT DNAIKAINETMNKVKEGTEIANKTMETFNSIISSIKTSTSVSEEINDAITKQIGHLENV FT INSTEEMNTTSEKLMFIVELASLNTQYTKTSLKDLSEVSQNLKYISNNLLNEIEVDSKE FT NNVILNTYINGRPLYLDPALSYELNSSLLLNNIHIGLLTINSYGEISPGIAKSWYLEKD FT NLTWVFNLKKGIKFHNGKEVTSEDVKFSLERLLDPKLDSPNGWLLEIIEGSEDFKKGAA FT KHVSGIKILDKHRISLTLSYSYSGFLLNLGLELCGIINKDSINQGDVVGCGPYKISEFN FT DEGCKLEAFKEYFNGAPYIDIININFKSESPIDDFLNKALDVLTINDKNEYTTLCSNKN FT INLIEQDLLATYYASFNMKSNSIFSRDKDVRYALNLAIDKNRIIKDILGGLGVEAKGPF FT PPSIIPNNKLRGFSHNKSKAKEILSRSDFNRSRDKLNILIRKDEDSLFSKITEYILEDL FT KNIGIDCIVKEVNSSEYLNLDNILKCDMAISRWCADSGDPDNFLEPIFNIENVSNISRY FT DNKLVNEKLKKAKNLINPEKRKKLYEEIQEIIVEDVPWIFLYHPKLAIAVQNNILGLNA FT NPLGLFKYEDIIKN" FT misc_feature complement(922105..923700) FT /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5, score FT 198.9, E-value 8.3e-57" FT /inference="protein motif:Pfam:PF00496" FT misc_feature complement(923341..923409) FT /note="PS01040 Bacterial extracellular solute-binding FT proteins, family 5 signature." FT /inference="protein motif:ProSite:PS01040" FT misc_feature complement(923602..924372) FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 79.2, E-value 9.1e-21" FT /inference="protein motif:Pfam:PF00015" FT CDS 924802..925038 FT /transl_table=11 FT /gene="feoA" FT /locus_tag="CBO0816" FT /product="ferrous iron transport protein A" FT /db_xref="GOA:A5I008" FT /db_xref="InterPro:IPR007167" FT /db_xref="UniProtKB/TrEMBL:A5I008" FT /protein_id="CAL82369.1" FT /translation="MAESCKLSEVPVGRTCKVKELKVKELLKQRILDLGMVPNTEVYVL FT RRSPWGDPTAYLIRDTCIALRKEEGDKIIVTMN" FT misc_feature 924814..925032 FT /note="Pfam match to entry PF04023 FeoA, FeoA family,score FT 49.8, E-value 6.4e-12" FT /inference="protein motif:Pfam:PF04023" FT CDS 925183..925965 FT /transl_table=11 FT /gene="feoB" FT /locus_tag="CBO0817" FT /product="ferrous iron transport protein B" FT /note="Similar to the N-terminal region of Escherichia coli FT ferrous iron transport protein b feob or b3409 FT SWALL:FEOB_ECOLI (SWALL:P33650) (773 aa) fasta scores: E(): FT 8.3e-22, 41.2 38d in 216 aa" FT /db_xref="GOA:A5I009" FT /db_xref="InterPro:IPR011619" FT /db_xref="UniProtKB/TrEMBL:A5I009" FT /protein_id="CAL82370.1" FT /translation="MGLTYTSGKKEALKDLFNVEKDNKDDIVVALAGNPNTGKSTVFNA FT LTGLHQHTGNWPGKTVTNAQGKYNHKEKNFIVVDLPGTYSLLASSIEEQVARDFICFGK FT PDVVVVVVDATSVERNLNLLLQILEITPRVVVSLNLMDEAKKREIKIDINKLRSELGVP FT VIPSIARSNKGIYELKDTVYNLALENIKTNPVKVEYSNEIECEIKKISSLLEKVFPGEI FT SLQWLALRLLDGDESILNSISKYLNYDMKSALIKGGLR" FT misc_feature 925273..925926 FT /note="Pfam match to entry PF02421 FeoB, Ferrous iron FT transport protein B, score 261.0, E-value 2.9e-77" FT /inference="protein motif:Pfam:PF02421" FT misc_feature 925279..925302 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 925962..927485 FT /transl_table=11 FT /gene="feoB'" FT /locus_tag="CBO0818" FT /product="ferrous iron transport protein B" FT /note="Similar to the C-terminal region of Escherichia coli FT ferrous iron transport protein b feob or b3409 FT SWALL:FEOB_ECOLI (SWALL:P33650) (773 aa) fasta scores: E(): FT 1.4e-13, 25.42 38d in 476 aa" FT /db_xref="GOA:A5I010" FT /db_xref="InterPro:IPR011640" FT /db_xref="InterPro:IPR011642" FT /db_xref="UniProtKB/TrEMBL:A5I010" FT /protein_id="CAL82371.1" FT /translation="MKKIDKDESIKNTKNKLNIKYYDKIDDKKHKIKIQNVKLNIETKD FT SNKDKNLKEIFKNIENFKENYNEKIRDEIVKSIYNKAEDIAGNSVKKNREKFLSQQKID FT DIVTSKITGIPIMLLLLAGVLWITIEGANVPSELLAKMLFFIEDKLTQFFNYINAPSWL FT HGILVLGIYRTLAWVISVMLPPMAIFFPIFTLLEDAGYLPRIAFNLDHAFKKACAHGKQ FT ALTMCMGFGCNAAGVIACRIIESPRERLIAILTNNFVPCNGRFPTLIALSMIFVGLKFE FT GSGGSSFIATLMIVLLVLIGIGITLLVSYILSKTLLKGVPSSFTLELPPYRKPQIGRVI FT YTSIIDRTIFVLMRAIVVAAPAGAIIYILGNITVGDSTILVQVANALDPFSKAIGLDGF FT ILLAFILGLPANEIVLPILIMSYLSKGAMIDFESLEQLRNILISNGWTYLTLLNTMLFS FT LLHFPCGTTIWTIKKETGSTKWTIFSVIMPTIIAISVCFLTTQVYNLIV" FT misc_feature 925962..927470 FT /note="Pfam match to entry PF02421 FeoB, Ferrous iron FT transport protein B, score -51.3, E-value 1.4e-17" FT /inference="protein motif:Pfam:PF02421" FT misc_feature order(926292..926351,926409..926477,926481..926549, FT 926625..926693,926727..926795,926823..926891, FT 927009..927077,927153..927221,927279..927347, FT 927405..927473) FT /note="10 probable transmembrane helices predicted for FT CBO0818 by TMHMM2.0 at aa 111-130, 150-172, FT 174-196,222-244, 256-278, 288-310, 350-372, 398-420, FT 440-462 and 482-504" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 927914..927963 FT repeat_region 927984..928080 FT CDS 928200..928814 FT /transl_table=11 FT /gene="cobC" FT /locus_tag="CBO0819" FT /product="alpha-ribazole-5'-phosphate phosphatase" FT /EC_number="3.1.3.-" FT /db_xref="GOA:A5I011" FT /db_xref="InterPro:IPR001345" FT /db_xref="InterPro:IPR013078" FT /db_xref="InterPro:IPR017578" FT /db_xref="UniProtKB/TrEMBL:A5I011" FT /protein_id="CAL82372.1" FT /translation="MNVYLVRHGETEHNKRKNFYGKLDVGLNEKGEKQSYKVGELLKDV FT KFNKIYISDRKRTRETAERILERNRFYDKEKNIIYKDEKINEIDFGLFEGKSYEEIVSL FT YPKEQEKWEKDWKNFAPPKGESAVVFYNRVENFMKHIQKEEDGNYLIVTHGGVIRMIYS FT YILQNNMDFYWNFASRNGDITLIKYEYGNLFIDYILPTKLI" FT misc_feature 928200..928790 FT /note="Pfam match to entry PF00300 PGAM, Phosphoglycerate FT mutase family, score 127.3, E-value 2.9e-35" FT /inference="protein motif:Pfam:PF00300" FT misc_feature 928212..928241 FT /note="PS00175 Phosphoglycerate mutase family FT phosphohistidine signature." FT /inference="protein motif:ProSite:PS00175" FT CDS 928950..930521 FT /transl_table=11 FT /locus_tag="CBO0820" FT /product="putative exported protein" FT /db_xref="GOA:A5I012" FT /db_xref="InterPro:IPR007391" FT /db_xref="InterPro:IPR011098" FT /db_xref="InterPro:IPR022029" FT /db_xref="UniProtKB/TrEMBL:A5I012" FT /protein_id="CAL82373.1" FT /translation="MMLMVEKSSKKFDKRKIIISVIITGVILLGVIAICTSYMQRYVKK FT YSTLFYPGTRIENVNVSGKTLEEAKKLLKEQYVDKLPSRKLVIKAEGKNYPFEFSKLNV FT KYNLDKALDEAFNYGKKLNILSQYKIIVDPDDKCISTGFSYDKEVVKNFIDGIAKDVNK FT DPINAAVSSTDGKVSLVKHRAGKKLDSDKLQKYINNSMNGDASKDVEVQAPIVEVKPKV FT TTDKISSINTLISTFHTEYGGISSQERANNIEICAKSINGTVLMPGETFSFNQVVGERT FT EQRGYQSGPVIVGNQVESGLGGGICQVSSTLYNTILLSNIKSTERMHHTLPSSYVPLGM FT DATVDWGNIDYKFKNTFSYPIYIEGIADGSSIIFNLYSNSELKKRTYSIWNEVYNTINA FT NMKTEDDPNLPEGKQEIVQNAYTGYKVRVYKNILENGKVIGKELVSDDFYRPIEGLAKV FT GPKKPAPKPVEPKKDDSKPTPKPEEPKKDDPKAKPNDTNDKDKDKEKDKDKDKPTQETP FT KEDTKK" FT sig_peptide 928950..929046 FT /locus_tag="CBO0820" FT /note="probabilty 0.860, with cleavage site probability FT 0.471 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 929607..930080 FT /note="Pfam match to entry PF04294 VanW, VanW like protein, FT score 244.3, E-value 1.8e-70" FT /inference="protein motif:Pfam:PF04294" FT CDS 930792..931538 FT /transl_table=11 FT /gene="cobS" FT /locus_tag="CBO0821" FT /product="cobalamin synthase" FT /EC_number="2.-.-.-" FT /db_xref="GOA:A5I013" FT /db_xref="InterPro:IPR003805" FT /db_xref="UniProtKB/Swiss-Prot:A5I013" FT /protein_id="CAL82374.1" FT /translation="MKSILNDFLLMIQFFTRIPVNKNLQCEKVNFRRGAFFLPVVASII FT GGIEFLVYLGLKNFLPPNVIIVLLLLFTAMITGGLHMDGLADTCDGFFSLRDKERIIEI FT MKDSRMGAFGTIAMIINLLLKYQLLYSLVLKDCSIAIILAPVIGRISILFLCLSKRTAK FT KNGSGNIFIGNMSKPIIFLITIIALAMNTYFLGLKITIISFIAVLIITYLFYLLCLNKI FT NGLTGDTLGACNELGEITFLLILLMM" FT misc_feature 930813..931526 FT /note="Pfam match to entry PF02654 FT CobS,Cobalamin-5-phosphate synthase, score 145.5, E-value FT 9.9e-41" FT /inference="protein motif:Pfam:PF02654" FT misc_feature order(930891..930959,930969..931037,931125..931193, FT 931203..931262,931299..931367,931380..931448) FT /note="6 probable transmembrane helices predicted for FT CBO0821 by TMHMM2.0 at aa 34-56, 60-82, 112-134, FT 138-157,170-192 and 197-219" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 931683..931738 FT /note="intergenic repeat 2" FT repeat_region 931739..931803 FT /note="intergenic repeat 3" FT CDS 931996..932772 FT /transl_table=11 FT /locus_tag="CBO0822" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I014" FT /protein_id="CAL82375.1" FT /translation="MNVKKVRDLTLISLDKDKTLVVACDSSGSIGSKKNDILKIPAFYT FT GKFTIRVGILEVMCTGAEIVTVTNALCCEMNPTGREIIDGIKGELKRAGIDEVVLTGST FT EENFPSFSTGLGITVLGIVDNSVIKVNNVNNFGGNNEKHNKDDILLISVGIPKVGEEIN FT IYDDKEIVDYEDIKILLENPKVYEIVPVGSKGILYEGEILARNNNLKLKLEENISIDIK FT KSNGPATTIIAAIHKEEYENIRAKINNVNIIGKLER" FT repeat_region 932888..932984 FT CDS 933081..933362 FT /transl_table=11 FT /locus_tag="CBO0823" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I015" FT /protein_id="CAL82376.1" FT /translation="MNFTGIIMGLFMLFFTGIGHVIVIKGEYHFGIKIWPSFLILGVGL FT IVLSLIIDNVYLSGGLGIGGLTFLWGILELFQQKERVKKGWFPKKQKN" FT misc_feature order(933090..933149,933168..933236,933249..933308) FT /note="3 probable transmembrane helices predicted for FT CBO0823 by TMHMM2.0 at aa 4-23, 30-52 and 57-76" FT /inference="protein motif:TMHMM:2.0" FT CDS 933493..933675 FT /transl_table=11 FT /locus_tag="CBO0824" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I016" FT /protein_id="CAL82377.1" FT /translation="MQLTELELQNLRELISKHETACNKLNAYGEQAQDQQIKQMFQKSA FT QDAHNTKQKLMTFLG" FT CDS 933693..933941 FT /transl_table=11 FT /locus_tag="CBO0825" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR012851" FT /db_xref="UniProtKB/TrEMBL:A5I017" FT /protein_id="CAL82378.1" FT /translation="MQDKDMINDTLSALKASLTGYSTVISETDNQQLRQEIQQMRNSCE FT TSQYDFYTVAKQKGFYKPAAQASQQQIQTVKSQVSGS" FT repeat_region 934068..934097 FT repeat_region 934120..934149 FT CDS 934510..935862 FT /transl_table=11 FT /locus_tag="CBO0826" FT /product="putative exported protein" FT /db_xref="InterPro:IPR012854" FT /db_xref="InterPro:IPR018763" FT /db_xref="UniProtKB/TrEMBL:A5I018" FT /protein_id="CAL82379.1" FT /translation="MKKTKILILILFCFLIGITSYFFVGAKENEAQVKENSKKDEQKMK FT EEKYSKFSGLNLSKVDIKLKYKDKILNLKLPIYMDKNRYYVPVNNVLDQIGVNYIIKEG FT KVHTEINNKKIDIHKNLANISGKKYKLRKDTILKEDIMYMSLFDFNKIVGLKASWNETE FT KIISLYKNKEQEKIENNNKDSKRKPAFVRLEDITSNQRYKTPEELEKLRVISDYLYSKN FT IPFHVAWVPRYLDPKNNIDDDASRDFNIHNANFVYTLDYFIDRGGIIGLHGYTHQSGAE FT VSIDGIEFDETRNNDESIIRERVQKAIQCAKVLDIPVGFFESAHYSATNEETKIIEQYF FT NYMYDPPKFASMGNIAKRKSQGRTVTYIPTPLDYVDGVKHADKVIEKINNLDEGTLGSF FT FYHPSIESSFIKFKTNKDGSVEYTYEDNSPLKKIIKAFEKNNYEFKKITEF" FT sig_peptide 934510..934585 FT /locus_tag="CBO0826" FT /note="probabilty 1.000, with cleavage site probability FT 0.660 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature 934528..934587 FT /note="1 probable transmembrane helix predicted for CBO0826 FT by TMHMM2.0 at aa 7-26" FT /inference="protein motif:TMHMM:2.0" FT CDS 936133..936486 FT /transl_table=11 FT /locus_tag="CBO0827" FT /product="putative 6-pyruvoyl tetrahydrobiopterin synthase" FT /EC_number="4.2.3.12" FT /db_xref="GOA:A5I019" FT /db_xref="InterPro:IPR007115" FT /db_xref="UniProtKB/TrEMBL:A5I019" FT /protein_id="CAL82380.1" FT /translation="MILIKKFKFDAAHNLIHYHGKCERLHGHTYGLVIKISGERDKEDM FT VIDFTELKAIVKENVLDILDHAYINDIIEQPTAENIAVWIWDKLYTKLKRDNCSLYEIE FT VWETETSGVVYNG" FT misc_feature 936133..936483 FT /note="Pfam match to entry PF01242 PTPS, 6-pyruvoyl FT tetrahydropterin synthase, score 77.1, E-value 3.8e-20" FT /inference="protein motif:Pfam:PF01242" FT CDS 936659..937777 FT /transl_table=11 FT /gene="folP" FT /gene_synonym="dhpS" FT /locus_tag="CBO0828" FT /product="dihydropteroate synthase" FT /EC_number="2.5.1.15" FT /db_xref="GOA:A5I020" FT /db_xref="InterPro:IPR000489" FT /db_xref="InterPro:IPR006390" FT /db_xref="InterPro:IPR011005" FT /db_xref="UniProtKB/TrEMBL:A5I020" FT /protein_id="CAL82381.1" FT /translation="MNIFMNKNNITPLKIFNVLAPAANIIKQEILALGGDCAVNKYCIN FT CKVETSDIILLGTKRQYKKLLQKLKCMTFFRIEEIVGELENYIKNNGAVKTVLKDEREI FT NYENLKVMGIINCTPDSFYEGSRKDSTEEALKTAEKMLKEGAEILDIGGESTRPGSDPV FT DEEEEIKRVVPVIREIKNKFKDVIISIDTYRANTAKSAIEAGADIVNDISAMKYDENMV FT KVVKEYNVPVILMHVKGKPKDMQIDPVYENLMKEIHLYFNERIEYCKSHGITEDKIILD FT PGIGFGKTVEHNLKIMNRIEELKSFNLPVLLAASRKATIGKVLGNLPTEERLEGTIALS FT CLAVDVGIQMVRVHDVKENIRAIRMLEAVRKI" FT misc_feature 936998..937732 FT /note="Pfam match to entry PF00809 Pterin_bind, Pterin FT binding enzyme, score 404.4, E-value 1.1e-118" FT /inference="protein motif:Pfam:PF00809" FT misc_feature 937091..937132 FT /note="PS00793 Dihydropteroate synthase signature 2." FT /inference="protein motif:ProSite:PS00793" FT CDS 937909..938160 FT /transl_table=11 FT /locus_tag="CBO0829" FT /product="hypothetical protein" FT /note="Similar to internal regions of several including FT Clostridium perfringens hypothetical protein Cpe1732 FT cpe1732 SWALL:Q8XJM4 (EMBL:AP003191) (548 aa) fasta scores: FT E(): 0.00013, 35.06 38d in 77 aa" FT /db_xref="UniProtKB/TrEMBL:A5I021" FT /protein_id="CAL82382.1" FT /translation="MLEYRFDTQLLIEGENLSEDRINEYITKNIEGDCLLAVGDEELIK FT IHFHTNTPWKVLEYCASLGDIHDIVVENMERQSNGRQG" FT CDS 938260..938715 FT /transl_table=11 FT /gene="folK" FT /locus_tag="CBO0830" FT /product="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine FT pyrophosphokinase" FT /EC_number="2.7.6.3" FT /db_xref="GOA:A5I022" FT /db_xref="InterPro:IPR000550" FT /db_xref="UniProtKB/TrEMBL:A5I022" FT /protein_id="CAL82383.1" FT /translation="MHTVYVAFGSNIGEKESYIKRALEKIEERGMEIIKVSSIYETEPY FT GVLDQDSFLNGVVKIETNLTPEDLIGELLNIEKQLNRVRERRWGPRTIDLDIIFYDDLI FT INEKDLVIPHKDMENREFVLKPLCDIDENFIHPVLKKSVRELYDELK" FT misc_feature 938266..938652 FT /note="Pfam match to entry PF01288 FT HPPK,7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase FT (HPPK), score 230.1, E-value 3.4e-66" FT /inference="protein motif:Pfam:PF01288" FT misc_feature 938518..938553 FT /note="PS00794 FT 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase FT signature." FT /inference="protein motif:ProSite:PS00794" FT CDS 938834..939274 FT /transl_table=11 FT /locus_tag="CBO0831" FT /product="heat shock protein" FT /db_xref="GOA:A5I023" FT /db_xref="InterPro:IPR002068" FT /db_xref="InterPro:IPR008978" FT /db_xref="UniProtKB/TrEMBL:A5I023" FT /protein_id="CAL82384.1" FT /translation="MFELIPFREDDLARHDDFFSPFVKNFFNDDYFKEMSNINKNFNVD FT LKETDENYLIEADLPGTKKEDISIDFHNNYLVINAKRQESVEDKKENYVRHERHYGEFK FT RNFYIDNADENKIDASFNNGVLKITIPKTNQDNNKRKKIEIH" FT misc_feature 938948..939271 FT /note="Pfam match to entry PF00011 HSP20, Hsp20/alpha FT crystallin family, score 98.1, E-value 1.8e-26" FT /inference="protein motif:Pfam:PF00011" FT repeat_region 939336..939373 FT /note="palindromic repeat at this position" FT CDS 939594..940946 FT /transl_table=11 FT /locus_tag="CBO0832" FT /product="MerR-family transcriptional regulator" FT /db_xref="GOA:A5I024" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:A5I024" FT /protein_id="CAL82385.1" FT /translation="MKNTSKKLFTTGEFAKKAGVTIRTLRYYDKIGLLVPSSHNELGHR FT LYSKEDFGKLQKILTLKFIGLSLEDIANIMKYDLNHKDFKKSLEIQKEIMKKKIKHIQS FT IIKAIDEAADTIDFNKEMDWDKFINIISAINSDKNWTQQYENASNLRARIAIHELFSTN FT KEGWMSWFFKELKHELSRISSNCQNYNEKINNTNMSGLNSLDCKNNNEKIDNYNASELN FT SLDLKETSNIKILELGCGDASLWNKNFNHIPSNWEITLTDFSEGMLKDAKKNLREKRSR FT FNFKIVNAENIPFEEESFNVVIANHMLYHVPNINKALKEINRVLKSEGILFASTVGKNH FT MKEIREIISTFDIYNLTSESWEITDSFQLENGLKIVSEYFNMVELKRYKDNLKVTDPVY FT ILDYIFSMPGNNKVNLSSKDLKKIYDYLEDNIKEKENIYITKDTGYFKGKK" FT misc_feature 939618..939683 FT /note="Predicted helix-turn-helix motif with score FT 1630.000, SD 4.74 at aa 9-30, sequence FT FTTGEFAKKAGVTIRTLRYYDK" FT misc_feature 939621..939734 FT /note="Pfam match to entry PF00376 merR, MerR family FT regulatory protein, score 66.1, E-value 7.8e-17" FT /inference="protein motif:Pfam:PF00376" FT misc_feature 939627..939695 FT /note="PS00552 Bacterial regulatory proteins, merR family FT signature." FT /inference="protein motif:ProSite:PS00552" FT CDS 941001..942176 FT /transl_table=11 FT /locus_tag="CBO0833" FT /product="putative spore coat polysacharide biosynthesis FT protein" FT /db_xref="GOA:A5I025" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5I025" FT /protein_id="CAL82386.1" FT /translation="MKKIPFSPPDITEREIDAVVEVLKSGWITSGPKTQQFENNLAEYC FT DTNKSVAVSSASAGLELILKDFDIKEGDEVITTPYTYTATASVCLHRGIKPKFVDVAKD FT SFLIDIEKLADAITPKTKAIYTVDFGGVPVDYDAIKEVLKAKGREDIILVSDSAHSLGA FT IYKGKKVGGQVDFHVFSFHAVKNLTTAEGGAITFENNNFKGREDLHKDFKLQSLHGQSK FT DALSKMKAGAWEYDIVTDGHKCNMTDMGSAIGLVQLTRYEEMLRKREAIFDTYTKVLAE FT KDWAIIPFKKDETKETSYHLYPLRIKGFGEAERNEVIKILAEKDIATNVHFKPLPMFTL FT YKNLGYNIEDYPNAYAQYANEISLPVYSTLSLEDAEYVAKELVAAVEKVMK" FT misc_feature 941025..942149 FT /note="Pfam match to entry PF01041 FT DegT_DnrJ_EryC1,DegT/DnrJ/EryC1/StrS aminotransferase FT family, score 362.3,E-value 5.4e-106" FT /inference="protein motif:Pfam:PF01041" FT CDS 942318..943439 FT /transl_table=11 FT /gene="degT" FT /locus_tag="CBO0834" FT /product="putative pleiotropic regulatory protein" FT /db_xref="GOA:A5I026" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5I026" FT /protein_id="CAL82387.1" FT /translation="MKVNFYTSKREYLEKKAEFDKAIFDVVESGSFILGPQVKNFEEAI FT KEYTGAKHAIGVASGTDALVIASNILGFENGAEVITSPFTFLASTSCIAKHRATPVFVD FT IDEETFEMDLNQIESKVNSKTKGILPIHLFSQMNNMDKIMEIANKNDLRVLEDAAEAFG FT MRWKGNGDSYRHSGTIGDMGIFSFFPTKTLGGYGDGGMIVTNSDELAERTRMFRVHGAS FT KKYHYDYIGYNSRLDSMQAAVLSVKLKYINDAIKKREEIANMYMEKLQDCEYIRFPKIK FT GDQKPVYYVFNIRAERRDELVAYLKENEIGNSIYYPIPLHMQKCFSYLGHKEGDFPVAE FT KVSKEILALPIYPELKEEEVDFVCETIKKFYTK" FT misc_feature 942354..943421 FT /note="Pfam match to entry PF01041 FT DegT_DnrJ_EryC1,DegT/DnrJ/EryC1/StrS aminotransferase FT family, score 450.2,E-value 1.9e-132" FT /inference="protein motif:Pfam:PF01041" FT repeat_region 943466..943670 FT /rpt_family="CB.37" FT /rpt_type=DIRECT FT /rpt_unit_seq="tggtttaaaaaagggatatgtggcgagatc" FT /inference="ab initio prediction:REPuter" FT repeat_region 944009..944974 FT /note="repeated in CBO2366 (prophage)" FT CDS 944298..944792 FT /transl_table=11 FT /locus_tag="CBO0835" FT /product="putative nitroimidazole resistance protein" FT /db_xref="GOA:A5I027" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="InterPro:IPR024747" FT /db_xref="UniProtKB/TrEMBL:A5I027" FT /protein_id="CAL82388.1" FT /translation="MFREMRRKNQLLTENETIKIFEKGTSGVLAVLGDEDYPYAVPISY FT IYCDSKIYFHGAKFGHKIDAITKCEKASFCVIDEDNVISEEYTTYFRSAIAFGKIRVIE FT NETEKRNAIEKLAAKYTPEDEEGRLKEIEGTYKALCMIELDIEHMTGKEAIELVRANSK FT F" FT CDS 945263..945775 FT /transl_table=11 FT /locus_tag="CBO0836" FT /product="RNA polymerase sigma factor" FT /db_xref="GOA:A5I028" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014300" FT /db_xref="UniProtKB/TrEMBL:A5I028" FT /protein_id="CAL82389.1" FT /translation="MNTEELAIKAKSGDENAFCKLIKINKEVLYKTAFYYTKNEHDSLE FT ILDDTVYKAYKSIKKLKQEKYFNTWLMRILINSCITHINKRKRLIFFRKNIDITEKHES FT VDNREELLDLYKAIDTLEDKFKMIIILRYFNDLTVPQIADIMDYPIGTVKTYIHKALKQ FT LRIELEV" FT misc_feature 945323..945529 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 41.0, E-value 2.8e-09" FT /inference="protein motif:Pfam:PF04542" FT misc_feature 945611..945760 FT /note="Pfam match to entry PF04545 sigma70_r4, FT Sigma-70,region 4, score 58.2, E-value 1.8e-14" FT /inference="protein motif:Pfam:PF04545" FT CDS 945780..946943 FT /transl_table=11 FT /locus_tag="CBO0837" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I029" FT /protein_id="CAL82390.1" FT /translation="MDYDKKSFREKLELIEVPEEVDLVIDKAIKRAKNRHKNNFLKATG FT VLAAMFALCVFLNKTSPVFAEYVSDTSQGVKNLISHFRDKGIDNAIENGYVQGTDKNKN FT DFSKSVEDKGLTVTIDQFAISGNQIIMGYTVKADSKYNDWEDINYYSFQIIDNKGRILV FT DNRDWDDIEKDLAKKSVTFEDHVVYNSLYYMDVDKGSFKKSRVKKGIFEFTGNKTKIAE FT IPDSITIKFYNFYDNTIQPDMYKRMKFFDRLFHKAPKVINGNWILNIKVDDKFKNAKEI FT NYIKDTDVDENSSINIEYVNLYPTVANAKFLVPINMSVNGVYLEDDNGNKYKCGISGSG FT EVENSNFCEETATFESPYFEKISKLYLVIKGKEDNKEKDFKIPLKKK" FT misc_feature 945897..945950 FT /note="1 probable transmembrane helix predicted for CBO0837 FT by TMHMM2.0 at aa 40-57" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(947235..947789) FT /transl_table=11 FT /locus_tag="CBO0838" FT /product="putative flavoredoxin" FT /db_xref="GOA:A5I030" FT /db_xref="InterPro:IPR002563" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:A5I030" FT /protein_id="CAL82391.1" FT /translation="MKKIKLQNRPFGPFPTILVGANVNGKPNYVTVGACGVVSLKPVLY FT VSLKDSHYTTLGIKENGYFSVNIPSADLVQKTDYCGIVSGHKTDKSNLFTSFYDELGKA FT PMAEECTMNFLCKVIQIIPVFDFQMFLGEIEAVYVNEECMTDGKPDPLKINPLMMMGSN FT YYDLSKTVGTLFKTGLEILPK" FT misc_feature complement(947379..947426) FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT /inference="protein motif:ProSite:PS00225" FT CDS 947877..948005 FT /transl_table=11 FT /locus_tag="CBO0839" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I031" FT /protein_id="CAL82392.1" FT /translation="MSYATVIVCPQVNMFIVLLLMCIVHNMNCDVSIKSEYTNDIP" FT misc_feature 947886..947954 FT /note="1 probable transmembrane helix predicted for CBO0839 FT by TMHMM2.0 at aa 4-26" FT /inference="protein motif:TMHMM:2.0" FT CDS 948108..948920 FT /transl_table=11 FT /locus_tag="CBO0840" FT /product="putative non-heme chloroperoxidase" FT /note="This CDS is also similar to CBO0849 (93.333 identity FT in 270 aa overlap)" FT /db_xref="GOA:A5I032" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR000639" FT /db_xref="UniProtKB/TrEMBL:A5I032" FT /protein_id="CAL82393.1" FT /translation="MGYYIRVEPNVKIYVEDLNPEGNKTIVFLHGWPGSHNLFEYQFNQ FT LPKMGYRCVGIDTRGFGNSDKPWSGYGYDRLSDDVRCVVEALKLHDFTLLGHSTGGAMA FT IRYMARHKGHGVSKLALIDAAAPSLIKRPNFPYGLEKEDVIKIIQGTYNDRPKMLRDFG FT DTFFFQHITEPFSDWFFQLGLQAASWATAAIANTWINEVLFSDLETINVPTLIIHGIHD FT KVVPFELGEIQNKMIKHSKLIPFKYSGHGSFYDQRDKFNKELVKFIEE" FT repeat_region 948238..949000 FT /note="repeated in CBO0849" FT misc_feature order(949118..949171,949229..949297,949334..949402, FT 949412..949480,949607..949675,949703..949771, FT 949808..949876) FT /note="7 probable transmembrane helices predicted for FT CBO0841 by TMHMM2.0 at aa 21-38, 58-80, 93-115, FT 119-141,184-206, 216-238 and 251-273" FT /inference="protein motif:TMHMM:2.0" FT CDS 949220..949888 FT /transl_table=11 FT /locus_tag="CBO0841" FT /product="putative efflux protein" FT /db_xref="InterPro:IPR004676" FT /db_xref="UniProtKB/TrEMBL:A5I033" FT /protein_id="CAL82394.1" FT /translation="MQHIVQLLGIAIIAFISTNIDDFFVLAAFFFDNSYNKKIVIIGQY FT IGITILILISCVGFIFKLLLPTQWIGIMGLLPIIIGIRHLINHVKNKKKSISNEIVVSE FT EIMEKNSEGQHETQTNVLRRIIDSKAFFIAIVTFSNGGDNIGVYTPLFASLNLNELIFT FT VIMFLIMVAVWCYIIIFFVNNKFTGIIFRKYGNVCFPYVLILLGIYIILKCNTLGLFIS FT " FT misc_feature 949262..949885 FT /note="Pfam match to entry PF03596 Cad, Cadmium resistance FT transporter, score 65.6, E-value 1.1e-16" FT /inference="protein motif:Pfam:PF03596" FT CDS 950037..950453 FT /transl_table=11 FT /locus_tag="CBO0842" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007553" FT /db_xref="UniProtKB/TrEMBL:A5I034" FT /protein_id="CAL82395.1" FT /translation="MKVLVSSCVMGCNCKYNGGNNLNSRVVDFLRDKEVIEICPEMLAS FT MSIPRASAEIVDGCVTESNGKNVDKEYRKGVELALEKIKDEDIDLVILQSRSPTCGVNR FT IYDGSFTGKLIEGQGLFAKALIYAGYKVIDSEDV" FT misc_feature 950040..950429 FT /note="Pfam match to entry PF04463 DUF523, Protein of FT unknown function (DUF523), score 133.8, E-value 3.3e-37" FT /inference="protein motif:Pfam:PF04463" FT CDS 950650..951018 FT /transl_table=11 FT /locus_tag="CBO0843" FT /product="AsnC-family transcriptional regulator" FT /db_xref="GOA:A5I035" FT /db_xref="InterPro:IPR000485" FT /db_xref="InterPro:IPR011008" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR019887" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:A5I035" FT /protein_id="CAL82396.1" FT /translation="MILLSPPSVTERVRRLEDDGIIERYTIKINKKKLGLSINCMIKVT FT MRNGQYEKFKIFIKEYKRSEWCYRIAGDGCFLVKLLVKSLNDIEEFINDISSYAITETI FT IAFSEVTINNSINKFLEE" FT misc_feature 950695..950949 FT /note="Pfam match to entry PF01037 ASNC_trans_reg, AsnC FT family, score 23.0, E-value 2.2e-07" FT /inference="protein motif:Pfam:PF01037" FT repeat_region 951138..951174 FT repeat_region 951216..952257 FT /note="repeated in CBO2182" FT CDS 951337..952185 FT /transl_table=11 FT /locus_tag="CBO0844" FT /product="conserved hypothetical protein" FT /note="Highly similar to CBO2182 (98.2 38d)" FT /db_xref="GOA:A5I036" FT /db_xref="InterPro:IPR003719" FT /db_xref="UniProtKB/TrEMBL:A5I036" FT /protein_id="CAL82397.1" FT /translation="MEYFHVDVFSNEILYGNGLTVVFCNEELEDNLMLKLTQEFKQFET FT IFVRRIDNSIFNARIFTVDEELDFAGHPILGAAATIHSHIFRNEEDMAITFQLNQKTII FT VNSKKIEEYYEVQMNQGKAEFLCEVSKEKRNKYVHALNLSEENLSEEFPMEVVSTGLPY FT LLVPLTSGIENAKIISSKFEEMLKEVGAKFAYIFDVNYIEGRTWDNQGNVEDVATGSAA FT GPLGAYLYKHNIFNVGHEIIINQGRFVGRPSKIKVSMSISEKEILVSGEVAILAKGNIL FT L" FT misc_feature 951337..952179 FT /note="Pfam match to entry PF02567 PhzC-PhzF, Phenazine FT biosynthesis-like protein, score 85.3, E-value 1.3e-22" FT /inference="protein motif:Pfam:PF02567" FT repeat_region complement(952408..952593) FT /note="intergenic repeat 1" FT CDS complement(952701..953495) FT /transl_table=11 FT /locus_tag="CBO0845" FT /product="putative ABC transporter, membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I037" FT /protein_id="CAL82398.1" FT /translation="MNRNEKALIYKDINEITSSKRVIIPMTIVPIVLIVIIPLAILIGA FT NYIGNDSSMFTKIAPLIKKLPSEYKTYTPAQLLIKITIDFMFPSYFLIIPIMCSGVIGA FT SSFVGEKEHKTLESLLYTPISMEQLLRAKILGVFVPSYIVTLISFIVFGIIFNIGGFFY FT FGRLIFPDVKWLIIILWISPAINLLSLIFTVMVSSKSETFQEAQQVSGLLVIPVILILV FT AQMTGVLLLSKVVMFIGGAVLFILDYMLIKRISSKFVPEKLI" FT misc_feature complement(order(952743..952796,952806..952865, FT 952902..952970,953028..953096,953169..953237, FT 953367..953435)) FT /note="6 probable transmembrane helices predicted for FT CBO0845 by TMHMM2.0 at aa 21-43, 87-109, 134-156, FT 176-198,211-230 and 234-251" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(953514..954431) FT /transl_table=11 FT /locus_tag="CBO0846" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I038" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5I038" FT /protein_id="CAL82399.1" FT /translation="MNAINIENLKKSYDGQINALSNISLSIPKGEIFGFLGPNGSGKTT FT TVRILNGVLSATSGHAEILGIPVGKNNLEIHRLCGVMTESSSCYENLTAKENLIFFGKM FT HGIEEKLLNERTNFILKRLELLDVKDKKVKSFSTGMRKRISLAIALIHDPQILFLDEPT FT SGLDPENALNVTRLIKELAEENQVTIFLCTHQLKYAEDICTLYGFINDGNILGLGTFDE FT LASRKNATLKLKIRGKNISKEFGFIHEGNDIYNKSISGDKEVNTLIQNILTSGGEIYEA FT VQQKWSLEQLYFKYIKGTSNDVKL" FT misc_feature complement(953796..954344) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 143.6, E-value 3.8e-40" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(954300..954323) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(954428..955549) FT /transl_table=11 FT /locus_tag="CBO0847" FT /product="DNA-binding protein" FT /db_xref="GOA:A5I039" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5I039" FT /protein_id="CAL82400.1" FT /translation="MRDLNIGKCIIHKRKEKGITQEQLANYIGVSKASVSKWESGSSYP FT DIVLLPELATYFNISVDELLGYSPQLTKEDIKKIYSKLSHEFAVRPFDEAMEQCNKLIK FT KYYSCFPFLLSIIQLLLNHSNLIKNDAIKKEIFQQCVFLSRRIKEESENISYIKNANTM FT EALAEMALGNSEEVIRLLDNKLDPYRGDDVILINAYQMQGKTAEANKVNQILLYNNVIN FT TLALLNNYLSLNMMDPVLFEKIYSQGIQIIDSFQLKEILTNDVFAIHIIAAQGYLITQN FT KEKAIDALERYMNTVCSIQFPLSFKENEYFTHIGKWLEDNNFIGTNTPVDEITIKKSFV FT DIVVQNPAFEPLREDERYNLLVKKLKEKLGEKK" FT misc_feature complement(954935..954958) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(955358..955522) FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 63.3, E-value 5.6e-16" FT /inference="protein motif:Pfam:PF01381" FT misc_feature complement(955430..955495) FT /note="Predicted helix-turn-helix motif with score FT 2141.000, SD 6.48 at aa 19-40, sequence FT ITQEQLANYIGVSKASVSKWES" FT misc_feature complement(955538..955549) FT /note="PS00228 Tubulin-beta mRNA autoregulation signal." FT /inference="protein motif:ProSite:PS00228" FT CDS 955981..956328 FT /transl_table=11 FT /locus_tag="CBO0848" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR023811" FT /db_xref="UniProtKB/TrEMBL:A5I040" FT /protein_id="CAL82401.1" FT /translation="MKKWYDEEYEFEIEVTGFLRSDHTERYCRNGEEVGDKYTCTYGCP FT INSDGQGICSKVMMIMFPIMESVRSGGDLENIGGNGKYSKDIVCPDGCVMFRLTAKKLD FT NENFYKGKFFD" FT CDS 957013..957825 FT /transl_table=11 FT /locus_tag="CBO0849" FT /product="putative non-heme chloroperoxidase" FT /note="This CDS is also similar to CBO0840 (93.333 identity FT in 270 aa overlap)" FT /db_xref="GOA:A5I041" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR000639" FT /db_xref="UniProtKB/TrEMBL:A5I041" FT /protein_id="CAL82402.1" FT /translation="MGYYIKVEPNVKIYVEDLNPEGNRTIVFLHGWPGSHKLFEYQFDQ FT LPKMGYRCVGIDTRGFGNSDKPWTGYGYDRLSDDVRCVVEALKLHDFTLVGHSTGGAMA FT VRYMARHKGHGVSKLALIDAAAPSLIKRPNFPYGLEKEDVIKIIQGTYTDRPKMLRDFG FT DTFFFQYITGPLSDWFFQLGLQAAGWATAAIAKTWINEVLFCDLETINVPTLIIHGIHD FT KVVPFELGEIQNEMIKYSKLIPFKYSGHATFYDQRDKFNKELVKFIEE" FT repeat_region 957143..957905 FT /note="repeated in CBO0840" FT misc_feature 957163..957810 FT /note="Pfam match to entry PF00561 abhydrolase, alpha/beta FT hydrolase fold, score 102.3, E-value 1e-27" FT /inference="protein motif:Pfam:PF00561" FT CDS 958349..958924 FT /transl_table=11 FT /locus_tag="CBO0850" FT /product="probable acetyltransferase" FT /db_xref="GOA:A5I042" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I042" FT /protein_id="CAL82403.1" FT /translation="MNSNEINISTERLTLRGIKISDAESMFKYRSNSQIYKFQSWKPQT FT LEEVKEFICEKTAKIPNIPDTWYQLGILIKETDELVGDIGIHFIDSDNLQAEIGFTLSL FT EHQCKGYATEAIISTINYLFNNLKKHRIIASVDPINIKSIALLERIEMRKEAHFKKSFW FT FNNEWADDVVYAILKEEWGNEKVKSNNG" FT misc_feature 958562..958807 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 31.3, FT E-value 2.4e-06" FT /inference="protein motif:Pfam:PF00583" FT CDS 958982..959635 FT /transl_table=11 FT /locus_tag="CBO0851" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR001646" FT /db_xref="UniProtKB/TrEMBL:A5I043" FT /protein_id="CAL82404.1" FT /translation="MSISNPRIPADLIMVDDFSSYAQGYLYEEIPITQIKIYGEHIEHF FT DFSKSEINTSIFENCTFLDCSFEGASFVDVVFQNCNLSNSNFTDAYFERCQFIACKCVG FT VNMIDTIFKQTSMQRSNFQYSYFDKAKMTDIAFEDIDFTEVSITEAKLKRFKAKNSHFI FT KNNFFKTMLTGVDFTKNELVAPTVSSPPIEFQGAKISMVQAADLIGIWGIIVDQ" FT misc_feature 959144..959263 FT /note="Pfam match to entry PF00805 FT Pentapeptide,Pentapeptide repeats (8 copies), score 23.1, FT E-value 0.00068" FT /inference="protein motif:Pfam:PF00805" FT misc_feature 959264..959383 FT /note="Pfam match to entry PF00805 FT Pentapeptide,Pentapeptide repeats (8 copies), score 19.5, FT E-value 0.0082" FT /inference="protein motif:Pfam:PF00805" FT misc_feature 959399..959518 FT /note="Pfam match to entry PF00805 FT Pentapeptide,Pentapeptide repeats (8 copies), score 5.4, FT E-value 0.77" FT /inference="protein motif:Pfam:PF00805" FT CDS complement(959905..960474) FT /transl_table=11 FT /locus_tag="CBO0852" FT /product="putative NAD(P)H dehydrogenase" FT /db_xref="GOA:A5I044" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/TrEMBL:A5I044" FT /protein_id="CAL82405.1" FT /translation="MVTIVFAHPWHGSFNKAILDTVTTVLEQRNNEYQVIDLNKENFNP FT IMTEGELALYSKGQHKDPLVTKYQNMLKKTDEIIFIFPLWWYDTPAIFKGFLDKVMLKN FT FAYTESNTGLKGKLTHIKSAKVITTGQSPRWYLKYFAGNLIQKTFINTTLKGIGIKNAK FT WLHCGDVSKGAQVKREKFLQRLAIDI" FT misc_feature complement(959911..960474) FT /note="Pfam match to entry PF02525 FT Flavodoxin_2,Flavodoxin-like fold, score 79.0, E-value FT 1e-20" FT /inference="protein motif:Pfam:PF02525" FT CDS complement(960492..961046) FT /transl_table=11 FT /locus_tag="CBO0853" FT /product="putative iron-sulfur flavoprotein" FT /db_xref="InterPro:IPR005025" FT /db_xref="UniProtKB/TrEMBL:A5I045" FT /protein_id="CAL82406.1" FT /translation="MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKN FT IQYCTGCNTCKKSSQSQCVLKDDMQDIYKSVEKADVLILATPVYVFNMTAQLKTFLDRL FT YAVDHNTLLNKKIVLLTTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTYKVQ FT VSENEQSKKAAYTLGSDILKY" FT misc_feature complement(960519..961046) FT /note="Pfam match to entry PF03358 FMN_red,NADPH-dependent FT FMN reductase, score 17.9, E-value 8.5e-08" FT /inference="protein motif:Pfam:PF03358" FT CDS complement(961151..961477) FT /transl_table=11 FT /locus_tag="CBO0854" FT /product="ArsR-family transcriptional regulator" FT /db_xref="GOA:A5I046" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I046" FT /protein_id="CAL82407.1" FT /translation="MDKKDLILECTKEIEESIDFEFFKTLFDPVRCDIIKYLAINGANN FT IKDISENFAQDRSVISRHLDLMHRHGIVNKTKENRSIFYELNDKYILEKFELTATNLKK FT LIRQ" FT misc_feature complement(961163..961411) FT /note="Pfam match to entry PF01022 HTH_5, Bacterial FT regulatory protein, arsR family, score 35.7, E-value FT 1.1e-07" FT /inference="protein motif:Pfam:PF01022" FT CDS complement(961821..962648) FT /transl_table=11 FT /locus_tag="CBO0855" FT /product="MerR-family transcriptional regulator" FT /db_xref="GOA:A5I047" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="UniProtKB/TrEMBL:A5I047" FT /protein_id="CAL82408.1" FT /translation="MQGLLRIGQVSKLYGISLDTLRHYDRKGLLKPIIDPQNDYRYYSL FT EHLDILEMILVGKYIKIPLDQMKERIDSESIDGYLSMVKEQKERINEEKKLLNQLDQYA FT EDILELLTTISKFKNDYTFSTASVYKEIDITIYRIDLETLLQEDTKSQQTEGIESLEQW FT AFYHSEPNGTIVENDEVIGFSFADSTINTTILQKQFIFAAEHNIVAQHHVTGYYSNIMF FT WGVKKDLMEYLYKLCCHFNLHDSALLVKYNFALLHKSMEHEYFVEIYFPQNPV" FT misc_feature complement(962520..962633) FT /note="Pfam match to entry PF00376 merR, MerR family FT regulatory protein, score 54.4, E-value 2.6e-13" FT /inference="protein motif:Pfam:PF00376" FT misc_feature complement(962571..962636) FT /note="Predicted helix-turn-helix motif with score FT 1284.000, SD 3.56 at aa 15-36, sequence FT LRIGQVSKLYGISLDTLRHYDR" FT CDS 962761..963378 FT /transl_table=11 FT /locus_tag="CBO0856" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I048" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I048" FT /protein_id="CAL82409.1" FT /translation="MDNIYIEKYQNTDFRDIIALLVESFKSKFSQHQKLSNNDIENILY FT ASWHLKADDPAYLHFVAKQYKKVVGVILIRCSKTENTNENIPIIWLCRRYGIYNVIMMY FT TKMIMLEDHKLNEGECYIEHIAVDGTCRGKGIGMLLLQHGEKALLDRGYTSYTLAVAGG FT NPAKHLYCRFGFEDIKKIKSPFKGYFVGESQWTIMQKAYNHE" FT misc_feature 962938..963288 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 35.2, FT E-value 1.6e-07" FT /inference="protein motif:Pfam:PF00583" FT CDS 963371..963526 FT /transl_table=11 FT /locus_tag="CBO0857" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I049" FT /protein_id="CAL82410.1" FT /translation="MSSGNTVVLILINQATLNEWPYPNIKSYVFTHQAMKNNENAELIS FT NYISLQ" FT CDS 963584..964099 FT /transl_table=11 FT /locus_tag="CBO0858" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007344" FT /db_xref="UniProtKB/TrEMBL:A5I050" FT /protein_id="CAL82411.1" FT /translation="MKVQVVEYNSEWPNLYLEEAEKIKNILGNELVDIYHIGSTSVVNL FT KAKPIIDIMPVVKDITKVDKYNKEFEDLGYEPKGEFGIAGRRYFRKGLENRTHQIHVFE FT KSNSNDIERHLAVRDYLRTHPEEAFEYGELKSRLATMFPDDIEAYCDGKDHFVKELERK FT ALEWNSSC" FT misc_feature 963584..964075 FT /note="Pfam match to entry PF04229 UPF0157,Uncharacterised FT protein family (UPF0157), score 162.0,E-value 1.1e-45" FT /inference="protein motif:Pfam:PF04229" FT CDS 964303..964686 FT /transl_table=11 FT /locus_tag="CBO0859" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I051" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I051" FT /protein_id="CAL82412.1" FT /translation="MKELHEYIDRLKDIYGRNGTIYGAFDNKTLVGLGALESKFIGRNN FT DQLKLDMLYISNNYRKKGIGKNLVNLLSKKAKELNAKSMYISATPFRNTVEFYFAMGAK FT LTNEINKDLYKLEPYDIHMVLQL" FT misc_feature 964366..964614 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 40.1, FT E-value 5.3e-09" FT /inference="protein motif:Pfam:PF00583" FT CDS complement(965391..966092) FT /transl_table=11 FT /locus_tag="CBO0860" FT /product="pirin-family protein" FT /db_xref="InterPro:IPR003829" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012093" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:A5I052" FT /protein_id="CAL82413.1" FT /translation="MLKKIESKNMGSSNLGWLRSKFHFSFAEYYNPNNINFGVLRVIND FT DLIEAGTGFDTHPHKDMEIISYVVNGDLTHEDSMGNKNTITRGHVQFMSAGSGVYHSEH FT NFGKEILRLLQIWIFPDKQGYKPSYGDYRFNWDDRHNKWLHMVSDKNGNAPIKINQDIN FT IYSLELEKEKEIDFPVKEGRQAYLVQIEGNSIINNIELVDRDAMEIVEEDILIKTKETS FT HILILEMNKQD" FT misc_feature complement(965739..966086) FT /note="Pfam match to entry PF02678 Pirin, Pirin, score FT 171.9, E-value 1.1e-48" FT /inference="protein motif:Pfam:PF02678" FT CDS complement(966367..966675) FT /transl_table=11 FT /locus_tag="CBO0861" FT /product="putative transcriptional regulator" FT /db_xref="InterPro:IPR002577" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I053" FT /protein_id="CAL82414.1" FT /translation="MEKYHMCPKFENAFELLGKRWTGLIIRTLLNGQKRFSDIAEAIPN FT MSARMLTERFKELEEEGIIIRKVYPETPVRIEYELTEKGLDLQAVMDEIQKWAEKWN" FT misc_feature complement(966373..966630) FT /note="Pfam match to entry PF01638 DUF24, Transcriptional FT regulator, score 144.5, E-value 1.9e-40" FT /inference="protein motif:Pfam:PF01638" FT CDS 966804..967433 FT /transl_table=11 FT /locus_tag="CBO0862" FT /product="putative nitroreductase" FT /db_xref="GOA:A5I054" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:A5I054" FT /protein_id="CAL82415.1" FT /translation="MSELKKIIEERRSANNFIEGVKIPDKDFTEIFELLKLAPSCFNIQ FT HSHYLVVTDEGKKEQLRKAAFNQYKVHTASAVILVLGDKLAYKNSENIYSGMLNLGIMS FT KLDYDNTIRDINNLYEGRGEDFQRSEAIRNTSLSAMMFMLIAKDKGWDTCPMIGFNQDE FT VRQIFDIPENYEIALMITMGKEDSSKRRMRGYRKPVGEFVSFDSFQ" FT misc_feature 966825..967355 FT /note="Pfam match to entry PF00881 FT Nitroreductase,Nitroreductase family, score 126.5, E-value FT 5.1e-35" FT /inference="protein motif:Pfam:PF00881" FT CDS 967797..969239 FT /transl_table=11 FT /gene="lipA" FT /locus_tag="CBO0863" FT /product="putative secreted lipase" FT /db_xref="GOA:A5I055" FT /db_xref="UniProtKB/TrEMBL:A5I055" FT /protein_id="CAL82416.1" FT /translation="MKKNLNKIATIILLVFSMTLTNFSMIVRAAEPKAQGTQKVESSTT FT KKEVKDAEETIKIPTLEDIDNLIDSAEEVKSEEDINKMPPLKFPVEFPEVNTRSIIGGN FT NYPIVLVHGFMGFGRDELLGYKYWGGVVDLQEKLNASGHETYTATVGPVSSNWDRACEL FT YAYIVGGTVDYGEAHAKKFKHNRYGRTYPGIYKNISNENKIHLIGHSMGGQTIRTLTQL FT LSEGSEEEINCGQENISPLFEGGKHWIHSVSTISTPNDGTTLSDLMPAKDLISYTFGVL FT GTITGKNKLFSSIYDLKLDQWGLKKQNGESQRDYIERVLDSNIWNSTKDIATYDLSTEG FT AQELNTWVKAQPDVYYFSWTTQATKESILTGHSVAQIGPMNPIFYPTANLMGRYSRNQK FT DLPIIDKKWFPNDGVVNCISQDGPKLGSNDVIEQYNGGVKIGQWNAMPRIINTDHMDIV FT GTFGNVKDWYMDYASFLSNLSR" FT sig_peptide 967797..967881 FT /gene="lipA" FT /locus_tag="CBO0863" FT /note="probabilty 1.000, with cleavage site probability FT 0.646 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 967797..967886 FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT /inference="protein motif:ProSite:PS00430" FT misc_feature 968406..968435 FT /note="PS00120 Lipases, serine active site." FT /inference="protein motif:ProSite:PS00120" FT CDS complement(969474..970682) FT /transl_table=11 FT /gene="oxdD" FT /locus_tag="CBO0864" FT /product="oxalate decarboxylase" FT /EC_number="4.1.1.2" FT /db_xref="GOA:A5I056" FT /db_xref="InterPro:IPR006045" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR017774" FT /db_xref="UniProtKB/TrEMBL:A5I056" FT /protein_id="CAL82417.1" FT /translation="MYIQNQYQNLCNLLMSGCIPQPIRDGAGDTDIGPRDILRDLENPD FT MLVPPSTDTGLIPNLKFSFSDTNMTIRPGGWSREITVRELPVATTMAGVNMRLTPGGVR FT EVHWHQQSEWSYMLKGRARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEGCEF FT LLLFDDGNFSDLRTFSLSEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPL FT ESEAIESPYGTIPQSYKHSLLAQKPMTTSGGSVRIADTSNFPVAKTTAAALVEIKPGGM FT REIHWHPNDEFQYFLTGQSRMTVFADTGASRTFDYRAGDVGYVPTGYGHYVQNIGNETV FT WFLEAFRSDRFRSISLSQMMAITPKQLITSNLNVGPGFLNALSRSKFQCSVGPCFHQTE FT CSN" FT misc_feature complement(969597..969965) FT /note="Pfam match to entry PF00190 Cupin, Cupin, score FT 44.9, E-value 1.9e-10" FT /inference="protein motif:Pfam:PF00190" FT misc_feature complement(970125..970499) FT /note="Pfam match to entry PF00190 Cupin, Cupin, score FT 51.8, E-value 1.6e-12" FT /inference="protein motif:Pfam:PF00190" FT CDS complement(970848..971426) FT /transl_table=11 FT /locus_tag="CBO0865" FT /product="putative lysine decarboxylase" FT /db_xref="InterPro:IPR005269" FT /db_xref="UniProtKB/TrEMBL:A5I057" FT /protein_id="CAL82418.1" FT /translation="MKRICVYSGSNLGLRSEYKESAKLLGKILAENKIELVYGGSRIGL FT MGEISSEVLRNNGKVIGVMPKGLFAGEMVHKDLTKLIEVENMHERKQTMAELSDGFIAL FT PGGLGTFEELFEILSWAQLGIHKKPIGILNISNFFDPLLHMIKNTCTEGFMNESNIKLI FT SVSDNPPELIKQMKNYVPPLMENKWRELV" FT misc_feature complement(970890..971291) FT /note="Pfam match to entry PF03641 Lysine_decarbox, Lysine FT decarboxylase family, score 202.2, E-value 8.6e-58" FT /inference="protein motif:Pfam:PF03641" FT CDS complement(971484..971939) FT /transl_table=11 FT /locus_tag="CBO0866" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR006750" FT /db_xref="UniProtKB/TrEMBL:A5I058" FT /protein_id="CAL82419.1" FT /translation="MVFIYYLLSLISGFALTLQVGINGVLRSKIGSPILSSLISFGVGT FT LGLALVFFFTVLNDSSTLPTAIHMKNTSWWMFLGGLLGAFYIFTTIFASPKIGFANMFS FT LVICGQILLAIIFDHFGLLGNQIHLLTPLRTLGIIFLVLGVYIIQTH" FT misc_feature complement(order(971496..971564,971574..971642, FT 971661..971729,971772..971840,971877..971939)) FT /note="5 probable transmembrane helices predicted for FT CBO0866 by TMHMM2.0 at aa 15-37, 50-72, 87-109, 116-138 and FT 142-164" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(971499..971933) FT /note="Pfam match to entry PF04657 DUF606, Protein of FT unknown function, DUF606, score 113.5, E-value 4.2e-31" FT /inference="protein motif:Pfam:PF04657" FT CDS 972053..972940 FT /transl_table=11 FT /locus_tag="CBO0867" FT /product="LysR-family transcriptional regulator" FT /db_xref="GOA:A5I059" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I059" FT /protein_id="CAL82420.1" FT /translation="MYINLELYRIFYITAKLGSISKAAKELFTSQPAVSQSIKLLEGKL FT GGKLFHRTPRGVSLTLEGEVLFKYIEQGYGLMMTAERKFSELKNLNSGQIRIAVCSAVC FT KYYLIKYIETYNLNYPHIKIYVKDKSSYEIAKALDSGEIDIGILNMNIDTSNSLNIIKT FT FKIQDCFVVGEKYKEICEKQITLKELVDKYSIILLEKGGNTRGYIDNYFSSHGLDIIPQ FT IELSNVELMIEFAKRGLGVSCVIKDYIKKELEQKQLYEVSIKEKIPERIMGIATKKDIP FT MSTAAERFIELMGD" FT misc_feature 972065..972244 FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 73.8, E-value 3.8e-19" FT /inference="protein motif:Pfam:PF00126" FT misc_feature 972104..972169 FT /note="Predicted helix-turn-helix motif with score FT 1742.000, SD 5.12 at aa 18-39, sequence FT GSISKAAKELFTSQPAVSQSIK" FT misc_feature 972107..972199 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 972314..972937 FT /note="Pfam match to entry PF03466 LysR_substrate, LysR FT substrate binding domain, score 100.0, E-value 4.8e-27" FT /inference="protein motif:Pfam:PF03466" FT CDS 973213..973659 FT /transl_table=11 FT /locus_tag="CBO0868" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I060" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I060" FT /protein_id="CAL82421.1" FT /translation="MIKIENLNNINKDDMDNILNVWESSVRATHTFLKEEDIISIKPQV FT KEGVDYVSKLLCVRDEKGIIQAFMGVHDSKIEMLFVDSNNRGNGIGKKLINYAINVLNT FT KFVDVNEQNTQGVGFYKHMGFDTFKRSEFDDHGNPFPILHMKFL" FT misc_feature 973381..973590 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 34.2, FT E-value 3.2e-07" FT /inference="protein motif:Pfam:PF00583" FT CDS complement(973968..974213) FT /transl_table=11 FT /locus_tag="CBO0869" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:A5I061" FT /protein_id="CAL82422.1" FT /translation="MNFDDAVFVANRREDWSSIYLIMPYINFGGHIMKYEVILFDADET FT LYDFKKSEREAMVGDSLTSDIQGGINFGMDTCWYNP" FT CDS complement(974310..974720) FT /transl_table=11 FT /locus_tag="CBO0870" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR006750" FT /db_xref="UniProtKB/TrEMBL:A5I062" FT /protein_id="CAL82423.1" FT /translation="MILNGELSKRIGTINSIVINYLTATLASIIFYYITLNFISNTPTI FT ANTSLVYFLGGVIGVLTTYIFNVIVHKIPTVYTVILRFIGQMLTSAIIDYLYFNIFSIG FT KVVGCVLFLIGIILNAKSDENYKQKQLKSLSN" FT misc_feature complement(order(974367..974435,974508..974576, FT 974619..974687)) FT /note="3 probable transmembrane helices predicted for FT CBO0870 by TMHMM2.0 at aa 12-34, 49-71 and 96-118" FT /inference="protein motif:TMHMM:2.0" FT CDS 974789..975163 FT /transl_table=11 FT /locus_tag="CBO0871" FT /product="conserved hypothetical protein" FT /note="Similar to The C-terminal regions of several FT regulators including Escherichia coli, and Escherichia coli FT O157:H7 regulatory protein nsr nsr or b2163 or z3420 or FT ecs3055 SWALL:NSR_ECOLI (SWALL:P33023) (219 aa) fasta FT scores: E(): 0.029, 28.44 38d in 116 aa, and to Bacillus FT cereus catabolite gene activator bc3449 SWALL:Q81AV5 FT (EMBL:AE017009) (230 aa) fasta scores: E(): 1.3e-09,34.95 FT 38d in 123 aa" FT /db_xref="GOA:A5I063" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012318" FT /db_xref="UniProtKB/TrEMBL:A5I063" FT /protein_id="CAL82424.1" FT /translation="MIAIPAAILREKYFDNIKLLHHLVDSLSDKLYVTINNSSYNFVYP FT LINRLASYLVEQHIDKNYIILNSSYLEIAQFLGTTYRHLNRTLKEMESRSIIRCDDKKI FT HILDIDQLGELSKNIYIKPL" FT misc_feature 974990..975055 FT /note="Predicted helix-turn-helix motif with score FT 1084.000, SD 2.88 at aa 68-89, sequence FT SSYLEIAQFLGTTYRHLNRTLK" FT CDS complement(975223..975645) FT /transl_table=11 FT /locus_tag="CBO0872" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I064" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:A5I064" FT /protein_id="CAL82425.1" FT /translation="MNFSQEFNRIMLSQKELALATSVDNIPNVRIVNFYYNISKKGVVY FT FSTFSDNPKIEEFTKNNIVAFTTIPSNGNEHVRVNKALIQKSNLTIFDLKNDFIKKIPD FT YEMTINEVGNQLSLYEIHFKEATVTLDYAQSDIITL" FT CDS 975768..976700 FT /transl_table=11 FT /locus_tag="CBO0873" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I065" FT /db_xref="InterPro:IPR001034" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013196" FT /db_xref="UniProtKB/TrEMBL:A5I065" FT /protein_id="CAL82426.1" FT /translation="MKIDRLISIIMVLLNNERISAIKLAEMFEVTPRTIYRDIDTISLA FT GIPIITHTGVNGGVSIMPEYKVDKKFFTASDISTLLMGLSSVSTTLSNKEVIGTLEKVK FT SLLPKDQFRDIELKSNQITIDLTTWMGNKSFQPNLEKVKSALNDSKYLSFEYYVGNRKK FT DKRCIEPYKLILKENNWYLQGYCTLREDFRVFKLSRISNLEILESIFVPREFKSKPLDG FT SGWIDKRLITIKLLVDWSLREQMVERCGEDNVKAYGEDKFIVEFPFVADDLGYNILMGF FT GDKCECLAPENVRVELIKRIKKLLHIYEN" FT misc_feature 975822..975887 FT /note="Predicted helix-turn-helix motif with score FT 1709.000, SD 5.01 at aa 19-40, sequence FT ISAIKLAEMFEVTPRTIYRDID" FT CDS complement(976908..977378) FT /transl_table=11 FT /locus_tag="CBO0874" FT /product="putative membrane membrane protein" FT /db_xref="InterPro:IPR024528" FT /db_xref="UniProtKB/TrEMBL:A5I066" FT /protein_id="CAL82427.1" FT /translation="MLKNIIQVLMAGVGTLGFTLFFSVAKKHVAAATFGGLLSWTIYLV FT IYHITESIFLGNMIASMIVCLWSELMARKLKAPTNIFMIPGIIPLLPGGTLYYTMEAML FT QRNKKVFVQKGIETVMITVGIVAGIVAVSVILVYFFTLLKKYKENLNSKLTC" FT misc_feature complement(order(976950..977018,977079..977138, FT 977166..977222,977241..977294,977307..977366)) FT /note="5 probable transmembrane helices predicted for FT CBO0874 by TMHMM2.0 at aa 5-24, 29-46, 53-71, 81-100 and FT 121-143" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(977282..977378) FT /locus_tag="CBO0874" FT /note="probabilty 0.998, with cleavage site probability FT 0.878 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT CDS complement(977378..978139) FT /transl_table=11 FT /locus_tag="CBO0875" FT /product="putative membrane membrane protein" FT /db_xref="InterPro:IPR010619" FT /db_xref="UniProtKB/TrEMBL:A5I067" FT /protein_id="CAL82428.1" FT /translation="MQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVC FT NVYAITTLIIMTMKDSEGRHYTQSVRINSTATDLGQLEALNAMAREICSKVPPISEIGS FT ALDNNKLRKESNIKKCIGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGMDHFFQIRKL FT NRVIYTVIACFLSGCLAQLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIM FT PGLYRLIEAFMIALSIAIGFVGSMMLLGGIL" FT misc_feature complement(order(977390..977458,977501..977557, FT 977576..977644,977687..977755)) FT /note="4 probable transmembrane helices predicted for FT CBO0875 by TMHMM2.0 at aa 117-139, 154-176, 183-201 and FT 216-238" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(978820..979320) FT /transl_table=11 FT /gene="defA" FT /gene_synonym="def" FT /locus_tag="CBO0876" FT /product="peptide deformylase" FT /EC_number="3.5.1.88" FT /db_xref="GOA:A5I068" FT /db_xref="InterPro:IPR000181" FT /db_xref="InterPro:IPR023635" FT /db_xref="UniProtKB/TrEMBL:A5I068" FT /protein_id="CAL82429.1" FT /translation="MSTKPILLLGDEILYRISEEIQKSNLDKAKQVINDLHDTIVSFKN FT RYGFGRAIAAPQIGESVRIIYMHLGDKTHYFINPILEFIGEDTFHLWDDCMSFPGLEVY FT VERHKKCKVTYKNLSWEDCEMYLEGDLSELFQHEYDHLDGILAVQRAKDLKSFRINKNK FT SGY" FT misc_feature complement(978838..979317) FT /note="Pfam match to entry PF01327 FT Pep_deformylase,Polypeptide deformylase, score 72.6, FT E-value 8.7e-19" FT /inference="protein motif:Pfam:PF01327" FT CDS 979553..980989 FT /transl_table=11 FT /locus_tag="CBO0877" FT /product="GntR-family transcriptional regulator" FT /db_xref="GOA:A5I069" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5I069" FT /protein_id="CAL82430.1" FT /translation="MEIQITLKRNTSVPLYIQIYEAYRSAILSNHLEPNSKLASIMQLK FT QSLCVSRNTIEMAYLQLLSEGFIYSKSGSGYFVSDLDNYESLDYSNNQSSSKEISIRPI FT ESLHLSRSYAKYDFKPGSVEHNQFPFKKWNRVAENIMSLENEEILTYSDPRGESLLRIE FT ISKYLKCSRGVNCHPDQIIIGAGTQTLISLLCFILGKNKPLKVAVEDPGFTAVRKAFEW FT NGCDIMPISLNNNVFNISMLKSKLDCPSAIYLTPSNQHPMGGLLNVSERLSLLNWSKNK FT DTYIIEDDYDSEFRYNIHPVPTIFSLDQFDKVIYLGTFSKTLFPAMHVGYIVLPKNLAE FT EFAEIGCYYNQTASKIHQLTIAEFMKSGYFEQHIRKMRTLYAKKHKKIVDSIKNVFGSH FT AHIIGDHAGVNLALRVNRPYSESDLIQRAKEVGVIVYPISFYHSNQKSTNKHNDIFLGY FT GHMKLEEIEHAITLLGEAWL" FT misc_feature 979595..979786 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 36.1, E-value FT 8.6e-08" FT /inference="protein motif:Pfam:PF00392" FT misc_feature 980471..980518 FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT /inference="protein motif:ProSite:PS00225" FT misc_feature 980948..980980 FT /note="PS00639 Eukaryotic thiol (cysteine) proteases FT histidine active site." FT /inference="protein motif:ProSite:PS00639" FT CDS complement(981067..981585) FT /transl_table=11 FT /locus_tag="CBO0878" FT /product="putative nitroreductase" FT /db_xref="GOA:A5I070" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:A5I070" FT /protein_id="CAL82431.1" FT /translation="MNFIDLAKERYSVRNFDTKKIEQEKLDLILKAGQLAPTAVNYQPQ FT RILVIESNEALEKLKTCTIYHFNAPMALLICADKDEAWKRSYDGKSHTDIDGSIVATHM FT MLQAAELGLGTTWVGHFDPSAIRNAFSIPTNLEPICLLPVGYPSKDAKPNPNHQKRKDI FT SQTVFYNHF" FT misc_feature complement(981148..981567) FT /note="Pfam match to entry PF00881 FT Nitroreductase,Nitroreductase family, score 100.8, E-value FT 2.8e-27" FT /inference="protein motif:Pfam:PF00881" FT CDS complement(981828..982634) FT /transl_table=11 FT /locus_tag="CBO0879" FT /product="putative iron-sulfur cluster-binding protein" FT /db_xref="GOA:A5I071" FT /db_xref="InterPro:IPR017896" FT /db_xref="UniProtKB/TrEMBL:A5I071" FT /protein_id="CAL82432.1" FT /translation="MKEKITEMIRNFVKEYEQKDDISTKWGEPLVGFADANHPYILNLK FT ELITQTHKLPTDVLSDASIVIAYFIPFTKELANTNRIVGDISSPEWALAYEETNAMFVK FT LNEYIISELRKIGYHAGISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLITKIG FT CCGRYSTIVTNLDVKPDSPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVL FT RKNAELYTEFGSSYTNKSGDHPNSVGSEVCGKCVVNTPCTFFYRKP" FT misc_feature complement(982008..982067) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 15.0, E-value 0.0011" FT /inference="protein motif:Pfam:PF00037" FT CDS 983406..984239 FT /transl_table=11 FT /gene="licT" FT /locus_tag="CBO0880" FT /product="transcription antiterminator" FT /db_xref="GOA:A5I072" FT /db_xref="InterPro:IPR004341" FT /db_xref="InterPro:IPR011608" FT /db_xref="UniProtKB/TrEMBL:A5I072" FT /protein_id="CAL82433.1" FT /translation="MKVVKVINNNLIKSFDDNNNEILVMGCGLGYKKAPGHEVDEKLIE FT RIYTCNDRKDSNQLTKLLKKIPLEHIQVTNQIVSFAKASLGKKLNENVYITLADHINFA FT IERQKDGVAIKNALLWEIKKFYNHEFLVGKEALSIIKNKLGVTLSEDEAGFIALHIVNA FT LMDDISIQKATKMTKMIEKIINIIKYYFNLELDEYSIHYERFITHLKFFAQRLFTETII FT SDGDTQFIEVLKKQYKKEYGCTLKIRDFIKNEYGCELTEDEMIYLTIHIKRITSI" FT misc_feature 983406..983582 FT /note="Pfam match to entry PF03123 CAT_RBD, CAT RNA binding FT domain, score 66.7, E-value 5.2e-17" FT /inference="protein motif:Pfam:PF03123" FT misc_feature 983607..983894 FT /note="Pfam match to entry PF00874 PRD, PRD domain, score FT 132.4, E-value 8.6e-37" FT /inference="protein motif:Pfam:PF00874" FT misc_feature 983931..984227 FT /note="Pfam match to entry PF00874 PRD, PRD domain, score FT 100.4, E-value 3.6e-27" FT /inference="protein motif:Pfam:PF00874" FT CDS 984364..986253 FT /transl_table=11 FT /gene="bglF" FT /gene_synonym="bglC" FT /gene_synonym="bglS" FT /locus_tag="CBO0881" FT /product="PTS system, beta-glucoside-specific IIabc FT component" FT /EC_number="2.7.1.69" FT /db_xref="GOA:A5I073" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR011297" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:A5I073" FT /protein_id="CAL82434.1" FT /translation="MNYKNLAETILKHVGGEENIESLTHCATRLRFNLKDEKKADTNTL FT KATEGVMGVVSSGGQYQVIIGSDVGNVYKEVMEFTSLENKNVPSENEKDDRKLLSKVID FT TISGIFTPIIPAITAAGMMKAVLAILMTFNVISKDSQSYQVINFMADSAFYFLPILLAN FT SAAKKFKCNPYMAMLIGGILLNPTFVSMVTAAKEKGGAISIFGLPISLNSYSSSVLPII FT LAVWFMSYVEPVADKISPKAIKFFSKPLITALITGIVTLVVIGPIGYIVSDKIGLGIKT FT LELYCSWLVPTILGGLTPLLVMTGTHYGLIPIGINNRMTMGYDTVIYPGMLASNVAQGG FT AALAVAFKSKNAEIKQLASSAGITAVCGITEPALYGINLRFRKALYSSMIGGAVGGLFL FT GIFRVSNYSGGSPGFLTLPGYIGGNTMINFIYAVIGAVISVVVSFVVCLILYKDQVEKS FT DSEVENKIENKIENKSVSAGNMITVKSPLKGEAVSLKNVNDPVFADEIMGKGIAIIPTE FT GKVVSPVEGTVEMVFDTKHAVALKDENGVEMIIHIGLDTVKLGGKYFNTHVEKGDKVSV FT GTLLVDFNMEKIKEEGYDCITPFVITNGNEFGEILSIDDKIVTQGEDIIKIVK" FT misc_feature 984382..984486 FT /note="Pfam match to entry PF00367 FT PTS_EIIB,phosphotransferase system, EIIB, score 67.9, FT E-value 2.2e-17" FT /inference="protein motif:Pfam:PF00367" FT misc_feature 984418..984471 FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT /inference="protein motif:ProSite:PS01035" FT misc_feature 984682..985539 FT /note="Pfam match to entry PF02378 FT PTS_EIIC,Phosphotransferase system, EIIC, score 122.8, FT E-value 6.8e-34" FT /inference="protein motif:Pfam:PF02378" FT misc_feature order(984685..984753,984790..984858,984886..984939, FT 984976..985044,985111..985179,985240..985308, FT 985336..985404,985516..985584,985642..985710) FT /note="9 probable transmembrane helices predicted for FT CBO0881 by TMHMM2.0 at aa 108-130, 143-165, FT 175-192,205-227, 250-272, 293-315, 325-347, 385-407 and FT 427-449" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 985858..986172 FT /note="Pfam match to entry PF00358 FT PTS_EIIA_1,phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 1, score 189.4, E-value FT 5.8e-54" FT /inference="protein motif:Pfam:PF00358" FT misc_feature 985996..986034 FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1." FT /inference="protein motif:ProSite:PS00371" FT repeat_region 986293..986333 FT repeat_region 986406..986503 FT /note="intergenic repeat 2" FT CDS 986582..988003 FT /transl_table=11 FT /gene="ascB" FT /locus_tag="CBO0882" FT /product="6-phospho-beta-glucosidase" FT /EC_number="3.2.1.86" FT /db_xref="GOA:A5I074" FT /db_xref="InterPro:IPR001360" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018120" FT /db_xref="UniProtKB/TrEMBL:A5I074" FT /protein_id="CAL82435.1" FT /translation="MSGLAKDFLWGGATAANQCEGGYLEGNRGLGTVDVIPAGVNRRAV FT MQGKMHYNNLQEDSYFPSHEAIDMYHNYKEDIALFAEMGFKCYRFSLSWSRIFPTGKEQ FT EPNEEGLAFYEKFIDELLKYNIEPVVTICHFDVPLVLEQEYGSWRSRKLIDAYLRYCEA FT IFKRFNGKVKYWITFNEINMLMHLPFMGAGIMFKEGENELEVKYQAAHNELVASALATK FT LAKEINKDNKVGCMLAAGQFYPYTCKPEDVLEAMEKDKNNYFFIDVQSRGEYPSYAKKF FT LERNNIKIEMQSEDEKILRENTVDFIAFSYYTSRLASSDPNAGEKSAGNVITSLKNPHL FT KSSKWGWQIDPIGLRITMNSLYDRYQKPLFIVENGLGAVDILNEDGTVDDDYRIAYLET FT HIKNMIDAVELDGVELLGYTTWGCIDLVSASTGEMKKRYGFIYVDKDNDGHGTLKRYKK FT KSFYWYKNVIKNNGL" FT misc_feature 986582..988000 FT /note="Pfam match to entry PF00232 Glyco_hydro_1, Glycosyl FT hydrolase family 1, score 514.9, E-value 6.2e-152" FT /inference="protein motif:Pfam:PF00232" FT misc_feature 986603..986647 FT /note="PS00653 Glycosyl hydrolases family 1 N-terminal FT signature." FT /inference="protein motif:ProSite:PS00653" FT misc_feature 987686..987712 FT /note="PS00572 Glycosyl hydrolases family 1 active site." FT /inference="protein motif:ProSite:PS00572" FT CDS 988122..988337 FT /transl_table=11 FT /locus_tag="CBO0883" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I075" FT /protein_id="CAL82436.1" FT /translation="MIDMKVKIVCQRDYETKEVELPMNEESLLNIQGSVLERDTLGYIA FT GADVKYYDNEGNEIENVFLLNKQLQS" FT CDS complement(988539..989492) FT /transl_table=11 FT /gene="mraY1" FT /gene_synonym="murX1" FT /locus_tag="CBO0884" FT /product="phospho-N-acetylmuramoyl-pentapeptide-transferase" FT /EC_number="2.7.8.13" FT /note="Also similar to CBO1459 (62.14 38d)" FT /db_xref="GOA:A5I076" FT /db_xref="InterPro:IPR000715" FT /db_xref="InterPro:IPR003524" FT /db_xref="InterPro:IPR018480" FT /db_xref="UniProtKB/TrEMBL:A5I076" FT /protein_id="CAL82437.1" FT /translation="MSTIIYAVLFSFLLSTITSLFLIPLFKKLNLGQSIKNGIPISHKK FT KAGTPTFGGIIFIFSSIITMLFIIKNYNKELLLVISSLIAFGLIGFIDDTLKKIHKKNE FT GLTSKGKMILLLFVSSIFAIYSYYNPSIGSIIMFPFTKKLFDLRILYIPFIIFYYVSTT FT NALNLTDGLDGLATSITLLVVTFFIFLSFGMGHYTLSISCGCIAGALLGFLRYNCYPAK FT IIMGDTGSLALGGAIATIAMILKNPFIVIIVGGIYVIEALSSLIQIVFFKLFGKRIFKM FT APIHHSLELHGWHETKIVSVFSIITTILCLIGFLSM" FT misc_feature complement(order(988548..988601,988680..988748, FT 988761..988829,988890..988958,988986..989054, FT 989088..989156,989214..989267,989286..989354, FT 989412..989480)) FT /note="9 probable transmembrane helices predicted for FT CBO0884 by TMHMM2.0 at aa 5-27, 47-69, 76-93, FT 113-135,147-169, 179-201, 222-244, 249-271 and 298-315" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(988743..989267) FT /note="Pfam match to entry PF00953 Glycos_transf_4,Glycosyl FT transferase, score 163.9, E-value 2.9e-46" FT /inference="protein motif:Pfam:PF00953" FT sig_peptide complement(989408..989492) FT /gene="mraY1" FT /gene_synonym="murX1" FT /locus_tag="CBO0884" FT /note="probabilty 0.629, with cleavage site probability FT 0.279 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT CDS 989905..990765 FT /transl_table=11 FT /locus_tag="CBO0885" FT /product="putative transcriptional regulator" FT /db_xref="GOA:A5I077" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5I077" FT /protein_id="CAL82438.1" FT /translation="MKNELCKIREIDEKVKGRLEYIKSNNDSMICDINTIKALKNNIYE FT KTSKIFIYNLKKLIQLEITQKNLAKKIGVSEDLLSKYKSAEAFPSIETLIYICEVYNIS FT IDKLTSIPLTAADMENLENNMDINTDIFEDRYYVYFLVTNIAREGAIHEGIVEFFNDNV FT VFKILSNGQVVKLFKGDYNTFDKLIFFNLQSANDGITYINMIKPNVNKNKYVGGIALLM FT LPSDANSKPCAQKILFSKIRVDRELHYERLKKLLSFSCQETTFGHIKLSSVEDEDAYNF FT IRKLI" FT misc_feature 990067..990228 FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 47.1, E-value 4.1e-11" FT /inference="protein motif:Pfam:PF01381" FT misc_feature 990091..990156 FT /note="Predicted helix-turn-helix motif with score FT 1531.000, SD 4.40 at aa 63-84, sequence FT ITQKNLAKKIGVSEDLLSKYKS" FT CDS 991189..991623 FT /transl_table=11 FT /locus_tag="CBO0886" FT /product="chloramphenicol acetyltransferase" FT /db_xref="GOA:A5I078" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:A5I078" FT /protein_id="CAL82439.1" FT /translation="MNNTFNHWTEIKYLKDSIKNPLIEVVEYTYYSGYYAGGDFEDVCV FT RYIWGDQKSKEMYNPIEDYGWTLDKIKIGKYCCFASGVVFMMGGNPAKHIKERFDKEKI FT DILLKIKWWDWEEDHIKKCIDILSSSDIDKLYKYYEMNIK" FT CDS 991867..992247 FT /transl_table=11 FT /locus_tag="CBO0887" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010499" FT /db_xref="InterPro:IPR011256" FT /db_xref="UniProtKB/TrEMBL:A5I079" FT /protein_id="CAL82440.1" FT /translation="MKNLKACYYELKGTNYEVGKLLGEKMKAMQQCLEMPKMKKSPFSK FT EEEIQIIKMFDEYCPGINEENDKPNNEFGENASYSEIVGTEGTSFDYIPEGMVAKVIPQ FT GKYVVFTHKGSVEKSQETYEYI" FT CDS 992600..993223 FT /transl_table=11 FT /locus_tag="CBO0888" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003741" FT /db_xref="InterPro:IPR024185" FT /db_xref="UniProtKB/TrEMBL:A5I080" FT /protein_id="CAL82441.1" FT /translation="MKSRECYNTLLAQKLIEELKKRNMEGFYCKTKDEALQKVLDIIPK FT DSMVSCGGSATLHEIGVRTALKNGDYNFIDPDDAQGAIAKDKAAHQALSADYYLMSSNA FT ISITGELVNIDGYGNRVASLIFGPKNVIVIAGLNKVEPNLDTAILRAQKYAAPNTMLIF FT KQDYTSFDELCREAELACSQTVITSMSMTKGRIKVILVGECLGF" FT CDS complement(993825..995624) FT /transl_table=11 FT /gene="cotA" FT /gene_synonym="pig" FT /locus_tag="CBO0890" FT /product="spore coat protein" FT /db_xref="GOA:A5I081" FT /db_xref="InterPro:IPR001117" FT /db_xref="InterPro:IPR008972" FT /db_xref="InterPro:IPR011706" FT /db_xref="InterPro:IPR011707" FT /db_xref="UniProtKB/TrEMBL:A5I081" FT /protein_id="CAL82442.1" FT /translation="MEVNPLDPKLIPKYTQELVIPPSFLPTICTSSVSGAVSYNYTVTM FT NQFEQQILPPEFNPTTVWGYGGTIKDTSTGEEVKFQNAPGPTFEAVRDIPINVKWVNEI FT TAPYSLAVDPTIHWANPNNTPMTPPPGGWPPFPPGVPEDQKDVPLVTHLHGGEQASMFD FT GNPEAWWTAKGLKGPKYITDTFHYPNVQESTTLWYHDHALGVTRLNVVMGLAGFYILRD FT PANPLDYPGSLITSAKYEVPIAIQDRSFNEDGSLNFPSEGDNPTIHPYWQPEFFGDTIM FT VNGRVWPNLNVDMTKYRFRLLNGSNARFYNLKFSNGMQFWQIGTDGGYLNKPVPLTSLL FT ISPGERADILVDFTEIPAGTKIILNNDANAPYPTGDAPDKDTTGQIMQFTVQDNMTMPP FT ELPEKLRCEPVPKLQSPCKKRVLTLYEIAGPNGPQMVTLNGQTWSAPVSELPVVGSTEE FT WDIVNLTMDAHPIHLHLVQFKIACRQAFDVNAYTEDWLDLNSDIGLPPWMTTPKALCPG FT SYTIGDNQPPAANEAGWKDTIQAPPGEISRIRVRFAPQNVECSCPGENLYPFDPSKGPD FT YVWHCHILDHEDNDMMRPYRVLP" FT misc_feature complement(994440..994850) FT /note="Pfam match to entry PF00394 Cu-oxidase, Multicopper FT oxidase, score 0.6, E-value 0.029" FT /inference="protein motif:Pfam:PF00394" FT repeat_region 995733..995846 FT /rpt_family="CB.697" FT /rpt_type=INVERTED FT /rpt_unit_seq="tataagaatgattaaaaacactttcgtagttaatactaat" FT /inference="ab initio prediction:REPuter" FT CDS 995788..995967 FT /transl_table=11 FT /locus_tag="CBO0891" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR018540" FT /db_xref="UniProtKB/TrEMBL:A5I082" FT /protein_id="CAL82443.1" FT /translation="MSELEDLLKDIDILRTQLESLINEKQGNLVDPEVVTSSKILNAAL FT NQYNKLIDEKLKEK" FT CDS complement(996209..996598) FT /transl_table=11 FT /locus_tag="CBO0892" FT /product="possible spore appendage protein" FT /db_xref="UniProtKB/TrEMBL:A5I083" FT /protein_id="CAL82444.1" FT /translation="MSMEEFNNSTDNDIRCQNDPVTIGATCVAELAPNVFVLLVEIEVE FT VPGEDIEQVLIIRLTPVQAAALIREVGLCEIVGPDEIPTPAPGREVNLICAFVFGENIF FT LVFDVETRTTDELVLVRVPLCPIVG" FT CDS 997008..997202 FT /transl_table=11 FT /locus_tag="CBO0893" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I084" FT /protein_id="CAL82445.1" FT /translation="MNNNKYNGLTQYLVIGMIIGLFVGVVFSIIMRNNTFFAISSPGFG FT LSFGLLIADIIWCVKKWEK" FT sig_peptide 997008..997119 FT /locus_tag="CBO0893" FT /note="probabilty 0.979, with cleavage site probability FT 0.972 between residues 38 and 39" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(997041..997100,997113..997181) FT /note="2 probable transmembrane helices predicted for FT CBO0893 by TMHMM2.0 at aa 12-31 and 36-58" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(997879..999111) FT /transl_table=11 FT /locus_tag="CBO0894" FT /product="putative porphyromonas-type peptidyl-arginine FT deiminase" FT /db_xref="InterPro:IPR007466" FT /db_xref="UniProtKB/TrEMBL:A5I085" FT /protein_id="CAL82446.1" FT /translation="MEIYRTVGEFEKQESVMIIWPLSAYATSKLNNDIVSVGIVQALIE FT EVKVIICCFDKDVQNRAQKVLTSEGIDTNLIKFVIFPSSIVYPRDFGAEIMISNKGNRA FT RVDFHFDMYGYYSEEDELSQLLYGFSKFHAESVGIKNTRYCNLISEGGDHEFNGDGIMM FT AIKETEVDKRNSNKTVAEVEKELKEVFNLEQIIWLPQCSYDDEYSYCGPIPSSDNTFNS FT FRSASANGHIDEICRFVSQDTILMAYVSDEEALNSKLHALNKERLDKGFEAVKAAKNSD FT GKPFKILKMPVPEPIYVDLYPKDDAYNHWSEAKEDMNGMLLNGTPFPDDPINVLPALSY FT CNFLIANNVVIAQKYYEEGMSELIKEKDEKALNVLKTAFPNHRIVQVNTLALNLYGGGV FT HCHTRNIPIAP" FT misc_feature complement(997891..999102) FT /note="Pfam match to entry PF04371 FT PAD_porph,Porphyromonas-type peptidyl-arginine deiminase, FT score 72.2, E-value 4.3e-20" FT /inference="protein motif:Pfam:PF04371" FT CDS 999408..1000016 FT /transl_table=11 FT /locus_tag="CBO0895" FT /product="putative transcriptional regulator" FT /db_xref="InterPro:IPR010499" FT /db_xref="InterPro:IPR011256" FT /db_xref="UniProtKB/TrEMBL:A5I086" FT /protein_id="CAL82447.1" FT /translation="MKSLDNYLKAPSPQDLIELSKNQLNKVDQEIEKLIQIRSILNRIV FT LQSEEALNAPLDKVIIMDLEEEPILYSDKNTLKGDTTNEEWSSYYEEFFKKTELRGPAF FT IGSVIDKNDLLSGKFGRIDRLFVRMDKPEATMKPAGLYAVTYYKGSYEAIVDFYEVFMR FT KIKEQGLIICGDAYEEYLLNVLATQNSMDFVTKISVAVK" FT CDS 1000046..1000909 FT /transl_table=11 FT /locus_tag="CBO0896" FT /product="putative membrane protein" FT /db_xref="GOA:A5I087" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:A5I087" FT /protein_id="CAL82448.1" FT /translation="MWVLFAFASAFFAGITAILAKIGIRNTDSNLATAIRTIIILIFSW FT LMVFIIGSQNFIYQISGQSLLFLILSGLATGASWLCYFKALQVGDVNKVTPIDKSSIVL FT TMILAFIFLDEKITWIKFIGMCAIGIGTYMMITKKEVEIKEASDNRWLFYAALSAVFAS FT LTSILGKVGISGIESNLGTALRTIVVLIMAWVVVFVSKKQGEIKNIDKKSWLFICLSGI FT TTGSSWLCYYRALQIGPASIVVPIDKLSIVVSIAFSYFILKEKLTKKSFSGLAIIVIGT FT LLLLVK" FT sig_peptide 1000046..1000118 FT /locus_tag="CBO0896" FT /note="probabilty 0.674, with cleavage site probability FT 0.341 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1000049..1000117,1000145..1000204,1000241..1000309, FT 1000367..1000435,1000496..1000564,1000592..1000645, FT 1000682..1000750,1000763..1000831,1000850..1000903) FT /note="9 probable transmembrane helices predicted for FT CBO0896 by TMHMM2.0 at aa 2-24, 34-53, 66-88, FT 108-130,151-173, 183-200, 213-235, 240-262 and 269-286" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1000076..1000456 FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 85.7, E-value 9.9e-23" FT /inference="protein motif:Pfam:PF00892" FT misc_feature 1000523..1000903 FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 85.4, E-value 1.2e-22" FT /inference="protein motif:Pfam:PF00892" FT CDS 1001265..1001852 FT /transl_table=11 FT /locus_tag="CBO0897" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007344" FT /db_xref="UniProtKB/TrEMBL:A5I088" FT /protein_id="CAL82449.1" FT /translation="MRKSLSEMSLEELWMLFPIILEEHNPLWEEWYLEEKKLIMSIIEI FT YNIERINHIGSTSVNRLIAKPTIDILLEITRDCDLKFLVNVLEENGYIFEKQPQKPAPH FT MMFMKGYTEKGFAEKVFHLHVRYLGDWDELYFRDYLRSHTDISQAYGDLKIDLKDKYEH FT NRDGYTEAKTEFIRKYTTIAKIEFNNKYSSRE" FT misc_feature 1001265..1001813 FT /note="Pfam match to entry PF04229 UPF0157,Uncharacterised FT protein family (UPF0157), score 84.7,E-value 2e-22" FT /inference="protein motif:Pfam:PF04229" FT CDS complement(1001933..1002310) FT /transl_table=11 FT /locus_tag="CBO0898" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I089" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:A5I089" FT /protein_id="CAL82450.1" FT /translation="MLYYLYPYNQSYRSIYHIIINTQTHTLTLFRGNNVYRTYKVAVGK FT PSTPTPKGNFKIINRAINPGGPFGARWLGLNIPYGDYGIHGTNNPSSIGKSVSNGCIRM FT FNNQVIELSNLVPIGTTVTIV" FT misc_feature complement(1001936..1002277) FT /note="Pfam match to entry PF03734 FT ErfK_YbiS_YhnG,ErfK/YbiS/YcfS/YnhG, score 142.2, E-value FT 9.5e-40" FT /inference="protein motif:Pfam:PF03734" FT CDS complement(1002484..1002813) FT /transl_table=11 FT /locus_tag="CBO0899" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I090" FT /protein_id="CAL82451.1" FT /translation="MYYRNDEQNINTDGVESSNENFYDEAYDYPTMNFSPMMYDPLMCT FT PQSMPTMAEYDNDNDDYDDPDDEFDDYELMRSPRARRRRRRHRHIHHHIHHHFFHTSMR FT PWWMR" FT CDS complement(1003077..1003385) FT /transl_table=11 FT /locus_tag="CBO0900" FT /product="hypothetical protein" FT /note="No significant database matches." FT /note="Highly similar to CBO1594 (85.5 38d), CBO2273 (82.3 FT 38d) and CBO2267 (85.5 0d)" FT /db_xref="InterPro:IPR024307" FT /db_xref="UniProtKB/TrEMBL:A5I091" FT /protein_id="CAL82452.1" FT /translation="MYRFAEKQTHVHEFLGSTRLAEIQTDPHDHRFAGVSGEAIRRGNS FT HVHNINTNTDFSDHFHIINVTTGPAIPVGNGRHVHFASGVTTLNDGHRHEFIFATLI" FT repeat_region 1003082..1003181 FT repeat_region 1003249..1003364 FT /rpt_family="CB.460" FT /rpt_type=INVERTED FT /rpt_unit_seq="tcagtttgaatttcagctaatcgagtgctacctaa" FT /inference="ab initio prediction:REPuter" FT CDS complement(1003491..1003700) FT /transl_table=11 FT /locus_tag="CBO0901" FT /product="hypothetical protein" FT /note="Similar to internal regions of several including FT Fusobacterium nucleatum subsp. vincentii ATCC 49256 FT acetyltransferase fnv1635 SWALL:EAA24765 FT (EMBL:AABF01000017) (173 aa) fasta scores: E(): FT 1.1e-07,46.15 38d in 65 aa" FT /db_xref="GOA:A5I092" FT /db_xref="UniProtKB/TrEMBL:A5I092" FT /protein_id="CAL82453.1" FT /translation="MDSTAELEKSKNFDEWLSIVIDSSREEIVMDGIVPSSTYLAIRLV FT YNKLIGMIDIRHKLNDYLFQNDIL" FT CDS 1004066..1004836 FT /transl_table=11 FT /locus_tag="CBO0902" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I093" FT /protein_id="CAL82454.1" FT /translation="MRLNNYMKNYADLLLKSNRSFYSSGHNNLNNRRNSNIYAETSDFI FT KNDIDFDRSKEFLSNRELLSRLKSINGKEIKPVKAVDNVLNFEKGVYNKMKTKSGITAV FT FTAGDGGNVYMPYDDIKDKFSLCPSDSGEVARAGRLFTYLASDKTGYCAQSSFSKEEIK FT ETLESVGIKPGWFEVKSGNYSNKFYMQDDGIISGGYDIEATRNGINDRDWFGDGYTKDS FT KFILDGKEYKLDDEGHLHIPKGEVCIMERLTRIK" FT CDS 1005375..1006982 FT /transl_table=11 FT /locus_tag="CBO0903" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I094" FT /protein_id="CAL82455.1" FT /translation="MKKKIYSSFIVLSLIISMALIYFLMPVFSVKFYSFYIVFIIIALL FT LSINVSLNKGKESSKIYGIPVILIGLFIVMFIISLSIFRASSYKSLLPTPKYEEFSKNI FT TPIDIKEIPTVNQKYAELLADKKLGEETSLGSKVELGTLTLQNVNGKLYYVAPLVHSGF FT MKWLLNDSTPGYITVSATDDKDVKLVTKLNGKDIKIRYQPKGFLNDDLKRHIYLKGTMN FT RGITDLTFELDDKGNPYYTATIYENKVGMSGQKAVGTAIVNPETGEVKKYTVENTPKWV FT DRIQPQSFVENNLKKWGKYIKGFFNFSGQDKLKTTEGTGVIYNNGKCYYYTGLTSVGKD FT ESSIGFALVDTRTQQTRIFKIAGATETASMKSAEGKVQNLGYTSTFPILINVDNVPTYF FT TTLNDKNDLTKMFAMISVTDYNIIGTGENITECKSNYIKNLASKGNLINVGSTGKEENI FT TDTIERINSYVVGNSTIYTFILKDHKDKIFNAGISISNELPITKEGDKVNIRYVDTKQD FT TINITSFDNIEFKQQSIK" FT sig_peptide 1005375..1005462 FT /locus_tag="CBO0903" FT /note="probabilty 0.995, with cleavage site probability FT 0.372 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1005387..1005455,1005468..1005536,1005555..1005623) FT /note="3 probable transmembrane helices predicted for FT CBO0903 by TMHMM2.0 at aa 5-27, 32-54 and 61-83" FT /inference="protein motif:TMHMM:2.0" FT repeat_region complement(1007027..1007140) FT repeat_region 1007150..1007205 FT /note="intergenic repeat 2" FT repeat_region 1007206..1007251 FT /note="intergenic repeat 3" FT CDS complement(1007346..1009706) FT /transl_table=11 FT /locus_tag="CBO0904" FT /product="ABC transporter, ATP-binding/permease protein" FT /db_xref="GOA:A5I095" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003838" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR018222" FT /db_xref="UniProtKB/TrEMBL:A5I095" FT /protein_id="CAL82456.1" FT /translation="MLQIKDLKKVYTTGEFKQTALDGVSIDFRQSEFVAILGPSGSGKT FT TLLNMLGGLDQYDSGNMIINGLSTKKFGESDWDTYRNNSVGFIFQSYNLIPHLSIVDNV FT EMGMTLSGVPKSEKRQKATYVLEKVGLGNHIHKKPNQLSGGQMQRVAIARALANDPEII FT LADEPTGALDTQTSEQIMDLIKEIAKDKLVIMVTHNPELAEEYADRIVSFSDGKIVSDT FT NPFVSENNSNDYKPKKTSMNFLTALKLSGNNIVTKKWRTALTAFASSIGIIGVALVLSL FT SNGFNKQINEFEKDSLSNYPISIEQNSMSLGMSPSSKSKDKEKTEFPNKSMIYPYDSSE FT NAAVHANAISTEYVDYIKKIDSSLINGISYTRNVNMNILKKQDGKVVSMNTSAAAFSTY FT PSKGDSFETDYLKSYYDVLAGSYPKNEKELVLVVDKYNQVDTNILEALGFSANSKNINF FT DSMIGTEYKLIYNDDYYTQSGKYFTVNGDTTNLENLYNNKNAVTLKISGIIRIKEDANV FT SNLSTAIVYSDQLAQDFIENAKNSQIVLAQKEAKYNVMNGNLLTEKTSTTTAAVHPTPS FT MATNTTSNVETKDDVLASLGATSSPTSISIYPVNFEAKDNITNYLDDWNKKLKEEDHIV FT YTDMASMITSLTENIMDGITIVLVAFAGISLVVSMIMIGIIIYISVLERTKEIGVLRAL FT GARKKDITRVFNAETFIIGFCSGGLGIAITYLLTIPVNSILYKFTDLNNVAQLNPLHAI FT ALVITSIVLTMIGGAIPSKMAAKKDPVIALRSE" FT misc_feature complement(1007370..1007756) FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 128.9, E-value 1e-35" FT /inference="protein motif:Pfam:PF02687" FT misc_feature complement(order(1007394..1007462,1007520..1007588, FT 1007661..1007729)) FT /note="3 probable transmembrane helices predicted for FT CBO0904 by TMHMM2.0 at aa 660-682, 707-729 and 749-771" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1008738..1008803) FT /note="Predicted helix-turn-helix motif with score FT 1004.000, SD 2.61 at aa 302-323, sequence FT ISIEQNSMSLGMSPSSKSKDKE" FT misc_feature complement(1009059..1009616) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 212.2, E-value 8.1e-61" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(1009239..1009283) FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1009572..1009595) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1009866..1010537 FT /transl_table=11 FT /locus_tag="CBO0905" FT /product="two component response regulator" FT /db_xref="GOA:A5I096" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I096" FT /protein_id="CAL82457.1" FT /translation="MFKVLVVEDDPALRKLFCTVLNKNGYKSIEAKDGHSALDVLYKEY FT IDLIISDIMMPNMDGYTLTKLIRESNNNVPILMITAKETFSDKQEGFRVGTDDYMVKPI FT DVNEMILRVGALLRRSQIINERRIVIGETTFLYDFLSVKYNNKELVLPQKEFYLIYKLV FT STPNKIFTRQQLMDEIWGIESETDPRTVDVHINRLRDRFKDNKDFNIITIRGLGYKVVK FT Q" FT misc_feature 1009869..1010228 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 130.1, E-value 4.2e-36" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 1010301..1010525 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 68.5, E-value 1.5e-17" FT /inference="protein motif:Pfam:PF00486" FT CDS 1010534..1011565 FT /transl_table=11 FT /locus_tag="CBO0906" FT /product="two component sensor kinase" FT /db_xref="GOA:A5I097" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5I097" FT /protein_id="CAL82458.1" FT /translation="MMNNKISVKMVVAFSLIVFFIVTSAVVISGLVVVFLSRFNVFTQP FT NPLILLGWLGIISIMVSTAIAQIIGKKVLSPISDLNKATKEVAKGNFNTRLSENSWTDE FT IREMAHSVNIMTHELGNIETLRDDFISNVSHEFKTPISAIEGYATLLQDDELSDEERRE FT YIHKILISTKRLSSLSGNILQITELENQKILPLEQKYYLDEQIRQTILLFEYEWTKKNI FT ILDINLDNITYIGSKELLAQVWQNILGNAIKFSHQNGTIQVTLTQTNEEVLITIKDNGI FT GMSEEVKNRVFEKFYQGDSSHYSDGNGLGLALVKRIIDICEGTIEISSHEAVGTEFTVK FT LPK" FT sig_peptide 1010534..1010723 FT /locus_tag="CBO0906" FT /note="probabilty 0.998, with cleavage site probability FT 0.200 between residues 64 and 65" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1010570..1010638,1010675..1010743) FT /note="2 probable transmembrane helices predicted for FT CBO0906 by TMHMM2.0 at aa 13-35 and 48-70" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1010684..1010896 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 55.6, E-value 1.1e-13" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 1010906..1011106 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 77.2, E-value 3.6e-20" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 1011236..1011562 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 123.2, FT E-value 4.9e-34" FT /inference="protein motif:Pfam:PF02518" FT CDS 1011917..1012465 FT /transl_table=11 FT /locus_tag="CBO0907" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR003784" FT /db_xref="UniProtKB/TrEMBL:A5I098" FT /protein_id="CAL82459.1" FT /translation="MDKKLKVRDMIYSALFATIIGVSSYIIIPLPISPVPITAQSLAVM FT LAGCVLTPIQVVLSMITFLLMGIIGIPVFSGGTAGFGIIVGKTGGYLIGFLVGAIIISL FT LVHKNKSLVNMLIACFIGGIIVVHILGSAWLGQVTSIGIKKAFLLGSAPFIPGDLIKAV FT VAVLIGRKLSKEMKRIGTQ" FT sig_peptide 1011917..1012031 FT /locus_tag="CBO0907" FT /note="probabilty 0.979, with cleavage site probability FT 0.813 between residues 39 and 40" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1011953..1012012,1012022..1012090,1012103..1012171, FT 1012184..1012237,1012256..1012324,1012352..1012420) FT /note="6 probable transmembrane helices predicted for FT CBO0907 by TMHMM2.0 at aa 13-32, 36-58, 63-85, FT 90-107,114-136 and 146-168" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1011998..1012444 FT /note="Pfam match to entry PF02632 BioY, BioY family,score FT 129.5, E-value 6.4e-36" FT /inference="protein motif:Pfam:PF02632" FT misc_feature 1012031..1012063 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT repeat_region 1012570..1012710 FT /note="intergenic repeat 1" FT repeat_region complement(1012608..1012638) FT CDS 1012870..1014576 FT /transl_table=11 FT /locus_tag="CBO0908" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="GOA:A5I099" FT /db_xref="InterPro:IPR006597" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:A5I099" FT /protein_id="CAL82460.1" FT /translation="MDRFSFLKIEWPEIYQIICNVEEKSKEDSNITLIELAQIAELITK FT YILKENHIEKNTELLDEINLLKDCHNLNADIVDFFYKIIIVSNKAIYEDYSDSIIAKSF FT LDKMFEILVWFAIEYGKTDYRKVDLSNMIPEDKDIFNKYIKSKSYNYTEKNIENETMIQ FT PFTIENEEFFKEENNDDINRYEQDVFETKEEFHKRIRNHEIFTLGRIFIEKSNINETDE FT IVAFPFSVYKSIQIKIPIIDMLYIERAEFENLSIEEEEYILFSKLDIINDKICIDINNI FT YIEVSNNKCKVHAVVLDISYYESYEKYRNIIYSKKPIPIGMIKFNKNKYDINKNEMPVT FT INYYDWIQKYILNTKAYIEIHRYEAKTLCKENLYYILNGKLDIFDKKLLIREYYIQSKS FT LNKNFRINLHSSDPMNKLRCLVDKEEILAMNIIGEMYCKEQNYKEAMYWYKKAAEKGNS FT TSMNKIGVMYYEGKGVEQDYQKAMYWYKKSSQEGNFTAMSNIGSMYYNGQGVTEDYKKA FT MYWYKKSYKEGNFGVMRDIGSMYYEGKGVIKDYKKAMQCYKKASQIDNFIK" FT CDS 1014918..1015463 FT /transl_table=11 FT /locus_tag="CBO0909" FT /product="GnaT-family acetyltransferase" FT /db_xref="GOA:A5I0A0" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0A0" FT /protein_id="CAL82461.1" FT /translation="MGKIKQAKYNINGKTIIIRHAEVQDAEQLINVTKKVNQETDFLLK FT DLGEVCLTIKEEKEFIQSQIDSQVDLLIVPEVDGRIVGVCSLNGNTNKRIRHSAQFGLA FT VEKEYCGMGIGKNLMKSGIQWAKENGIFRITLEVDINNYRAISLYLKLGFEIEGTLRND FT KMLSDGSYTSGYAMALLL" FT misc_feature 1015134..1015382 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 76.6, FT E-value 5.5e-20" FT /inference="protein motif:Pfam:PF00583" FT CDS 1015542..1017149 FT /transl_table=11 FT /locus_tag="CBO0910" FT /product="putative serine peptidase" FT /note="Similar over its C-terminal region to several LexA FT repressors including Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri lexa FT repressor SWALL:LEXA_ECOLI (SWALL:P03033) (202 aa) fasta FT scores: E(): 2.5e-07, 31.78 38d in 129 aa" FT /db_xref="GOA:A5I0A1" FT /db_xref="InterPro:IPR006197" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:A5I0A1" FT /protein_id="CAL82462.1" FT /translation="MKLESGQNRIAKSKHLGYGLLRGSKGTGKTTAAIYRGIYLKNQYC FT MYDKDKVLILSKNEENLNYIKNIYNDAEKTGVQYITLFSYNEDKLHFSSIYKIINKYFW FT EYIENNNLQYELASEKEKLAIIEECINDIKNEYKNLKYIDIKYSKFFLEEIQWMKDCMY FT YDLEEYKKADRIGRKTKKGEGPQRIIKNSKIREAVFKIMLLYNEKLKYKNLVDYSDVVS FT MSLKEASKNKENKFNHIIVDEAQNFTKLELKFIEALGRKNIYSSILFIADKEKNSNPKG FT WITKGRKLNNLQLGFEFKRFNLNKKIGINVKEEVETYIDDCNLKRKASNINTKNEDVSN FT VDNSNSEDKGLDKNIKNEWHKDKVNYDMDKFEYVDMKHRRSYEFSRGLGSNEEIIVEDQ FT GSKEEYKEDELTKLPVFNDIAAGEPILMNPCVEGEFNIPKYWVRGMKNCFILKVKGDSM FT IGANIEDGDHVVIKRQQMAENKDIVAVNLEGSATLKRLLIKKSGAVLMPENKKYKPIEI FT LEEGASIIGIAVGIIKGK" FT misc_feature 1015608..1015631 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1016775..1017104 FT /note="Pfam match to entry PF00717 Peptidase_S24,Peptidase FT family S24, score 89.3, E-value 8e-24" FT /inference="protein motif:Pfam:PF00717" FT CDS 1017427..1017984 FT /transl_table=11 FT /gene="cobU" FT /locus_tag="CBO0911" FT /product="bifunctional cobalamin biosynthesis protein FT [includes: cobinamide kinase; cobinamide phosphate FT guanylyltransferase]" FT /db_xref="GOA:A5I0A2" FT /db_xref="InterPro:IPR003203" FT /db_xref="UniProtKB/TrEMBL:A5I0A2" FT /protein_id="CAL82463.1" FT /translation="MSNKNKVVLITGGVRSGKSEFAESLLQKEKSVLYIATAKITDKEM FT EHRVEKHKERRNSEWKTYEGYKDLGKIIKYHNEKNILLDCVTIMTTNLMFHKEIDYENI FT KEEELDEILEGIKKEFHDLIISVKEENKNIILVTNEVGYSIVPAYKLGRIFRDFQGIIN FT KFIASLSDEVYLVTCGIPLKIK" FT misc_feature 1017448..1017978 FT /note="Pfam match to entry PF02283 CobU, Cobinamide kinase FT / cobinamide phosphate guanyltransferase, score FT 186.5,E-value 4.6e-53" FT /inference="protein motif:Pfam:PF02283" FT misc_feature 1017460..1017483 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1017658..1017705 FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT /inference="protein motif:ProSite:PS00038" FT CDS complement(1017988..1018116) FT /transl_table=11 FT /locus_tag="CBO0912" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0A3" FT /protein_id="CAL82464.1" FT /translation="MPFFYNGRDKTYLKSYISMPRIDFKIKCDWKILLLIIRLISY" FT repeat_region 1018121..1018151 FT repeat_region 1018183..1018231 FT CDS complement(1018406..1019170) FT /transl_table=11 FT /locus_tag="CBO0913" FT /product="MerR-family transcriptional regulator" FT /db_xref="GOA:A5I0A4" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="InterPro:IPR012925" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:A5I0A4" FT /protein_id="CAL82465.1" FT /translation="MHYKIKEVADMAGISVRMLHHYDKIGLLDPESVSDAGYRLYSDEN FT LDRLQQILFFKELNFPLQEIKIILDSPNFNKKEALETHKQLLLEKKIRLEKIIQSVDKT FT ISSMEGEFKMNKKEVLGAFDMTEIEEHQKKYSEEVKNKYGNTSAYKESNEKTSKYTKED FT WNNIMKDWDIIYKKLANLMDKNPDDKEVQEYIHQFREHISKNFYDCTPEIFRGLGELYV FT NDERFTANIDKYKTGLSKFLREAINVYCDNIK" FT misc_feature complement(1019048..1019161) FT /note="Pfam match to entry PF00376 merR, MerR family FT regulatory protein, score 51.6, E-value 1.8e-12" FT /inference="protein motif:Pfam:PF00376" FT misc_feature complement(1019099..1019164) FT /note="Predicted helix-turn-helix motif with score FT 1396.000, SD 3.94 at aa 3-24, sequence FT YKIKEVADMAGISVRMLHHYDK" FT misc_binding 1019552..1019733 FT /bound_moiety="coenzyme B12" FT /note="Cobalamin riboswitch" FT CDS 1019876..1021357 FT /transl_table=11 FT /gene="cobQ" FT /gene_synonym="cbiP" FT /locus_tag="CBO0914" FT /product="cobyric acid synthase" FT /db_xref="GOA:A5I0A5" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR004459" FT /db_xref="InterPro:IPR011698" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/Swiss-Prot:A5I0A5" FT /protein_id="CAL82466.1" FT /translation="MAKIMIQGTASSVGKSLIVAALCRIFKQDGYSVCPFKSQNMSLNS FT YITLDGKEMGRAQVLQAYAAGLEPEAYMNPILLKPTSDKKSQIIVNGKVYGNSTAMEYH FT NLKIKFKDMLKEQFEKLEEDFDIVVMEGAGSPAEINLRDRDIVNMGMAELVDAPVLLVG FT DIDKGGVFASLAGTMLLLNEGEKERVKGTIINKFRGDVEILKPGLDMLEDIIHIPCLGV FT VPYTRLQLEDEDGAVEFNKKAYAPIDIAVIKMPHISNFTDLDALKSEEDVSIRFVTSKE FT EFKEPDLLIIPGSKNTIEDLLYLRQCGLEERIKEYSREGKIIGICGGYQVLGSKIKDPY FT KVETDLGEIDGLNLLDMETTFEKEKVTTRVSAKLLNEETKNTVYGYEIHMGISKYGENI FT KPLFKIYDKNGEKVDYFDGAINEKGNVMGTYIHGVFDGVVFREKIINELRVKKGLKKKK FT SQMYEHMREKELDKLADIVRQSLDMEKIYSIIGMK" FT misc_feature 1019882..1020574 FT /note="Pfam match to entry PF01656 CbiA, Cobyrinic acid FT a,c-diamide synthase, score 287.7, E-value 1.5e-83" FT /inference="protein motif:Pfam:PF01656" FT CDS 1021359..1022321 FT /transl_table=11 FT /gene="cbiB" FT /locus_tag="CBO0915" FT /product="cobalamin biosynthesis protein" FT /db_xref="GOA:A5I0A6" FT /db_xref="InterPro:IPR004485" FT /db_xref="UniProtKB/TrEMBL:A5I0A6" FT /protein_id="CAL82467.1" FT /translation="MYLNITTNFIDIIIAVFIDWIIGDPYWFPHPVIYIGKLISFLEKK FT FRTKVKNEENLKIYGGIIVLIVCLASFLIPFMLLQAFKFNFYLYHGLNILIIWTTLAAK FT CLHGEAIKIYHALYKENIEEARLKLSYIVGRETKDLIGNEIMRADIETVAENASDGVIA FT PLFYAIIGGAPLAMMYKGINTMDSMLGYLNDEYRYIGFFPAKVDDIFNFVPARLTGILM FT CISAPLVGGNPFKSFKIMIRDRKNHKSPNCAYPEGATAAALKIQLGGTNVYFGQVVEKP FT TIGDKIKELVPIHIKESIKLMYASEALMIVMCTIIFKLF" FT misc_feature 1021383..1022318 FT /note="Pfam match to entry PF03186 CobD_Cbib, CobD/Cbib FT protein, score 334.7, E-value 1.1e-97" FT /inference="protein motif:Pfam:PF03186" FT misc_feature order(1021533..1021601,1021614..1021682,1021836..1021904, FT 1021992..1022060) FT /note="4 probable transmembrane helices predicted for FT CBO0915 by TMHMM2.0 at aa 59-81, 86-108, 160-182 and FT 212-234" FT /inference="protein motif:TMHMM:2.0" FT CDS 1022540..1023628 FT /transl_table=11 FT /gene="cobD" FT /locus_tag="CBO0916" FT /product="L-threonine-O-3-phosphate decarboxylase" FT /EC_number="4.1.1.-" FT /db_xref="GOA:A5I0A7" FT /db_xref="InterPro:IPR001176" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5I0A7" FT /protein_id="CAL82468.1" FT /translation="MHGGDIYTEGILKGKELIDFSSNINPLGLPDSFKDNLQEALNWVQ FT VYPDIQYRNLKRNLIDYLSFSLGYFYKEKVEKPNIKEENLVLGNGAVEIIDLAISNLKS FT ISILVPSFVEYELCAKKWNVQIDYCNLNEDMTYNYENIKKSLEKTEGIILGNPNNPNGS FT VIDKEEFIYILDYCDKNNKIIILDEAFIEFTGKNSFSFLNLCERYKCIFIIRALTKFFS FT MPGIRFGYGISFNNEFLNKIREKQNPWNINCFAEIAVKYVLKDEDFIEKSINYIEKEKI FT FMHENLKKCDLFHSVYSTYSNFVLCKLKDITGDELKNRLLEKGFALRVCKDFKNLNNNY FT VRFAIKTRELNQALVNILKEIK" FT misc_feature 1022756..1023625 FT /note="Pfam match to entry PF00155 FT aminotran_1_2,Aminotransferase class I and II, score 10.3, FT E-value 2.9e-06" FT /inference="protein motif:Pfam:PF00155" FT CDS 1023902..1024621 FT /transl_table=11 FT /gene="cbiM" FT /locus_tag="CBO0917" FT /product="putative cobalt transport protein" FT /db_xref="GOA:A5I0A8" FT /db_xref="InterPro:IPR002751" FT /db_xref="InterPro:IPR018024" FT /db_xref="UniProtKB/TrEMBL:A5I0A8" FT /protein_id="CAL82469.1" FT /translation="MKKKYLFLLTTALVLALSQSAYAMHIAEGFLPPKWAALYFVLSAP FT FIVIGVKHIRQKTKKNKDLKMLLAVVAAYAFILSAMKIPSVTGSCSHPTGTGLAAIIFG FT PFVASVVGVIVLLFQAILLAHGGITTLGANTFSMGIVGPIVSYLIYKGLKNKNQKLAVF FT LAASLGDLATYTVTSLQLALSFPAKTGGVMAAFAKFATIFSLTQIPLAIIEGLITIMIF FT EFMMKYSKEELKTLSEV" FT sig_peptide 1023902..1023968 FT /gene="cbiM" FT /locus_tag="CBO0917" FT /note="probabilty 1.000, with cleavage site probability FT 0.779 between residues 23 and 24" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1023914..1023982,1024010..1024063,1024100..1024168, FT 1024196..1024264,1024283..1024351,1024379..1024447, FT 1024505..1024573) FT /note="7 probable transmembrane helices predicted for FT CBO0917 by TMHMM2.0 at aa 5-27, 37-54, 67-89, FT 99-121,128-150, 160-182 and 202-224" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1024037..1024594 FT /note="Pfam match to entry PF01891 CbiM, CbiM, score 286.1, FT E-value 4.5e-83" FT /inference="protein motif:Pfam:PF01891" FT CDS 1024625..1024924 FT /transl_table=11 FT /gene="cbiN" FT /locus_tag="CBO0917A" FT /product="cobalt transport protein cbin" FT /db_xref="GOA:A5I0A9" FT /db_xref="InterPro:IPR003705" FT /db_xref="UniProtKB/TrEMBL:A5I0A9" FT /protein_id="CAL82470.1" FT /translation="MKKQNIIITIVSVVVILASLFIGGARGGEFAGADDQAEGIIEEMN FT KDYEPWFESIWEPPSGEIESLLFASQAALGAGVIGYYIGKKKNAKNNNASIKNQ" FT CDS 1024902..1025585 FT /transl_table=11 FT /gene="cbiQ" FT /locus_tag="CBO0918" FT /product="putative cobalt transport protein" FT /db_xref="InterPro:IPR003339" FT /db_xref="InterPro:IPR012809" FT /db_xref="UniProtKB/TrEMBL:A5I0B0" FT /protein_id="CAL82471.1" FT /translation="MLLSKTSKLSNIHPLEKVILSIIPIVILGFTQNYIIVFCNILFFL FT FMNLISKNNKKIFAKITLEVTAFAAISSITFAFDYGIVYTLTLIFKSVSAGLCLSFFSL FT TTPIDDMLYCLGKKEYLKDICDIAKGMERFLVVINDEYNILYSSIKSRGGFDTFKLTIR FT NTGKMAALLFINTLSRWKIIKEGLDSRGYVGYMPYLDRNFDFSYIRFLSILSYIILILL FT LVIFF" FT misc_feature order(1024965..1025033,1025070..1025135,1025145..1025213, FT 1025514..1025579) FT /note="4 probable transmembrane helices predicted for FT CBO0918 by TMHMM2.0 at aa 22-44, 57-78, 82-104 and 205-226" FT /inference="protein motif:TMHMM:2.0" FT CDS 1025994..1026656 FT /transl_table=11 FT /locus_tag="CBO0919" FT /product="putative precorrin oxidase" FT /db_xref="GOA:A5I0B1" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5I0B1" FT /protein_id="CAL82472.1" FT /translation="MEWINLQEKYNFIALKSKRIRILIIGGGRAAFIKGKAFLDRGCSL FT YILAPKFSKDVLDLKTYDNVEFIKNNYDEKYILDKHLVVIATEDEEVNNEIRNNCDALS FT KLYIDCSDKDKSLCFNSFQRESKTMVLALNNKIGCPKATYFIGEKIKKDLERYDNYIEY FT VTYIRSITKNNPMKDEIIDFICSNDFHFFFEKGYGNLILSMFYGGMDFEFCNSHTKK" FT CDS 1026625..1027497 FT /transl_table=11 FT /gene="hemC" FT /gene_synonym="popE" FT /locus_tag="CBO0920" FT /product="porphobilinogen deaminase" FT /EC_number="2.5.1.61" FT /db_xref="GOA:A5I0B2" FT /db_xref="InterPro:IPR000860" FT /db_xref="InterPro:IPR022417" FT /db_xref="InterPro:IPR022418" FT /db_xref="UniProtKB/Swiss-Prot:A5I0B2" FT /protein_id="CAL82473.1" FT /translation="MNFVIATRRSKLAQVQTEIIIDLLNKKHDIECEKLLIETVGDKIL FT EVSLDKIGGKGLFVKDIEVAMLEQRADAAVHSMKDVPYEMPKGFEIIAIPEREDVRDAF FT ISLDNIKFKDLRKGAKIGTSSRRRAAQLKLLRPDLDIVPIRGNVQTRIEKIKKENLDGV FT ILAVAGLKRVNLDHLITDYFDTKEMVPAIGQGALGIEVMEEHPKKELFKDLDHYNSKIC FT VLAERAFMRELDGDCHSTIGAYASIKDNIMHIIGIFERKNKIIKKEITGTKDQYEKLGI FT SLAEHILKD" FT misc_feature 1026628..1027260 FT /note="Pfam match to entry PF01379 FT Porphobil_deam,Porphobilinogen deaminase, dipyromethane FT cofactor binding domain, score 362.6, E-value 4.4e-106" FT /inference="protein motif:Pfam:PF01379" FT misc_feature 1027282..1027494 FT /note="Pfam match to entry PF03900 FT Porphobil_deamC,Porphobilinogen deaminase, C-terminal FT domain, score 49.5,E-value 7.7e-12" FT /inference="protein motif:Pfam:PF03900" FT CDS 1027633..1029093 FT /transl_table=11 FT /gene="hemD" FT /locus_tag="CBO0921" FT /product="porphyrin biosynthesis protein [includes: FT uroporphyrin-III C-methyltransferase and FT uroporphyrinogen-III synthase" FT /EC_number="2.1.1.107" FT /EC_number="4.2.1.75" FT /db_xref="GOA:A5I0B3" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR003043" FT /db_xref="InterPro:IPR003754" FT /db_xref="InterPro:IPR006366" FT /db_xref="InterPro:IPR014776" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:A5I0B3" FT /protein_id="CAL82474.1" FT /translation="MSKVYLIGAGPGDEELITLKAIRALKKCTAVMYDRLANGELLKYL FT APNCEIYYCGKEPGCHYKSQDEINKMLVKLAKEGHIVGRIKGGDPYVFGRGGEEALDIL FT EENIEFEVIPGVTSPVSVLNYAGIPITHRGISRGFHIFTAMTKDKLDIDWKSVVNIGGT FT LVFLMGLGRLELITKGLIENGMDKEGKVAVVMKGTTSKQKKVIGNLENIVEKVKEAKLE FT SPVIIVVGEVVSFSDKLNWYEKKPLFGRNICITRTKEQAKELKVQLLDLGAEVTEINSI FT EIKNTEDNLKSYLSKLKEYDYIALTSVNAVKIFFDYLIKENIDIRNINAKFAAIGPATS FT EAIRIRGIMPSIKSKHFVAESLFEEMRKHIQKGDKILVPRSKDARPFLVDALRKEGCTV FT DEVHIYGTLCGQCTYTERFEDADTVLFTSPSTVRNMISMVGIDSIKEKSIIAIGPITAA FT ELDKNNIECSICDEYSINGIIDKLLDLN" FT misc_feature 1027639..1028271 FT /note="Pfam match to entry PF00590 FT TP_methylase,Tetrapyrrole (Corrin/Porphyrin) Methylases, FT score 220.0,E-value 3.6e-63" FT /inference="protein motif:Pfam:PF00590" FT misc_feature 1027651..1027695 FT /note="PS00839 Uroporphyrin-III C-methyltransferase FT signature 1." FT /inference="protein motif:ProSite:PS00839" FT misc_feature 1027876..1027977 FT /note="PS00840 Uroporphyrin-III C-methyltransferase FT signature 2." FT /inference="protein motif:ProSite:PS00840" FT misc_feature 1028407..1029075 FT /note="Pfam match to entry PF02602 FT HEM4,Uroporphyrinogen-III synthase HemD, score 114.1, FT E-value 2.8e-31" FT /inference="protein motif:Pfam:PF02602" FT misc_feature 1028878..1028943 FT /note="Predicted helix-turn-helix motif with score FT 1023.000, SD 2.67 at aa 416-437, sequence FT ERFEDADTVLFTSPSTVRNMIS" FT CDS 1029238..1029420 FT /transl_table=11 FT /locus_tag="CBO0922" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0B4" FT /protein_id="CAL82475.1" FT /translation="MENNKKCPICGCEEIGEGKLESYMAPTDGSWLSSKVIADICTKCG FT YILAMRVKNPEKFKD" FT CDS 1029682..1030656 FT /transl_table=11 FT /gene="hemB" FT /locus_tag="CBO0923" FT /product="delta-aminolevulinic acid dehydratase" FT /EC_number="4.2.1.24" FT /db_xref="GOA:A5I0B5" FT /db_xref="InterPro:IPR001731" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5I0B5" FT /protein_id="CAL82476.1" FT /translation="MFRRHRRLRENEAIRAMVRETVTREEDFIYPMFVVEGENIKEEIS FT SLPGNYHYSIDRLEELVEEVKKSGIKGIMIFGVPDHKDECGSAAFDDNGIVQKGIRRLR FT ELMPELYIVADVCMCQYTSHGHCGIIHGHNVDNDESLKYLAKISLSYAKAGADMIAPSD FT MMDGRVYAIRKILDENNLKHVGIMAYSAKYCSAFYGPFREAANSAPQFGDRKTYQMDPA FT NGREAMLEIEDDINEGADIVMVKPALPYLDVIRMAKDRFEFPLAAYNVSGEYAMVKAAA FT KQGLIDERRVALEMLTSIKRAGADIIITYYAFEASAWLKEDRK" FT misc_feature 1029682..1030641 FT /note="Pfam match to entry PF00490 FT ALAD,Delta-aminolevulinic acid dehydratase, score FT 678.2,E-value 4.2e-201" FT /inference="protein motif:Pfam:PF00490" FT misc_feature 1030393..1030431 FT /note="PS00169 Delta-aminolevulinic acid dehydratase active FT site." FT /inference="protein motif:ProSite:PS00169" FT CDS 1030777..1032099 FT /transl_table=11 FT /gene="cobB" FT /gene_synonym="cbiA" FT /locus_tag="CBO0924" FT /product="cobyrinic acid a,c-diamide synthase" FT /db_xref="GOA:A5I0B6" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR004484" FT /db_xref="InterPro:IPR011698" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/TrEMBL:A5I0B6" FT /protein_id="CAL82477.1" FT /translation="MRSIIISSNSSGGGKTTVTLGLMKALIKKDYKVQGYKVGPDYIDP FT AFHSYVTENSSRNLDLFLMGEDGVKASYSRGKGDLGVIEGVMGLYDGKGIDTKYSTAHL FT SKVLNLPVVLVLTPKAQSATLCAEIMGILNYEKINIVGVIFNKVSESYYKLLKKLVEEN FT CGLKVFGYVPKEEKLELKSRHLGLIQSSEIKDLEEKIDICSELILKYVDIENLINHFEK FT TEKYKDNFYLENKNLNIGIPYDKAFSFYYKENIELLENVGNIKYFSPMKDEKLPEYLDF FT LYIGGGYPEVFIKELRENKSMLSSINKELNNGLTCYAECGGLMYLTEGIEDLEGYYKEA FT VGFLNGQCHMTKRLQNFGYAEIEVEKENKILSKGLKINCHEFHKSYVDLKEDKIYELTK FT NLYDDSTKKWSCGYIKNNTLAAYAHVHFFGNMDFVRNLFNR" FT misc_feature 1030783..1031463 FT /note="Pfam match to entry PF01656 CbiA, Cobyrinic acid FT a,c-diamide synthase, score 128.7, E-value 1.1e-35" FT /inference="protein motif:Pfam:PF01656" FT CDS 1032124..1032750 FT /transl_table=11 FT /gene="cobH" FT /gene_synonym="cbiC" FT /locus_tag="CBO0925" FT /product="precorrin-8x methylmutase" FT /EC_number="5.4.1.2" FT /db_xref="GOA:A5I0B7" FT /db_xref="InterPro:IPR003722" FT /db_xref="UniProtKB/TrEMBL:A5I0B7" FT /protein_id="CAL82478.1" FT /translation="MKDYIKKPMDIEKRSFEIIEEEMGKHNFSKEELKIVKRVIHTTAD FT FEYKDLIYIKEGAIEVAKEILTKGTKIYTDTNMALSGINKKALKDLNSTVQCFVSREDV FT VSIAKDRGITRSMSAVELAAEEGIEFFVFGNAPTALYKLMELMKEGKAKPKFIIGVPVG FT FVGAAESKKELEKLDVPFITIRGRKGGSNVAASIVNALMYMLVKR" FT misc_feature 1032145..1032741 FT /note="Pfam match to entry PF02570 CbiC, Precorrin-8X FT methylmutase, score 204.8, E-value 1.4e-58" FT /inference="protein motif:Pfam:PF02570" FT CDS 1032944..1033786 FT /transl_table=11 FT /locus_tag="CBO0926" FT /product="putative CAAX amino terminal protease" FT /db_xref="GOA:A5I0B8" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5I0B8" FT /protein_id="CAL82479.1" FT /translation="MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVF FT GITYILLSYLFLSNLCKKFFCHSLLECGIGKPKINFTWLVIGIILPIMVSVLLILTPGY FT FVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFG FT LLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIG FT VKHNAECIYSYVLNSKSILLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI" FT sig_peptide 1032944..1033079 FT /locus_tag="CBO0926" FT /note="probabilty 0.832, with cleavage site probability FT 0.624 between residues 46 and 47" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1032977..1033045,1033058..1033126,1033187..1033255, FT 1033298..1033366,1033400..1033456,1033469..1033522, FT 1033541..1033609,1033667..1033735) FT /note="8 probable transmembrane helices predicted for FT CBO0926 by TMHMM2.0 at aa 12-34, 39-61, 82-104, FT 119-141,153-171, 176-193, 200-222 and 242-264" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1033301..1033597 FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 68.4, E-value 1.5e-17" FT /inference="protein motif:Pfam:PF02517" FT CDS 1033962..1034705 FT /transl_table=11 FT /locus_tag="CBO0927" FT /product="putative iron-sulfur flavoprotein" FT /db_xref="InterPro:IPR005025" FT /db_xref="UniProtKB/TrEMBL:A5I0B9" FT /protein_id="CAL82480.1" FT /translation="MKISVIHGSQRNGNTEKTIQIVKSKLNSLENNDFFDFYLPKDLPL FT FCCGCFQCLDKGSFGGEFCPHAKYTHPIFERMKLSDGIIIASPVYSLAESGQLKVFLDH FT FGCIFMSHRPLQEMFSKTAFVISTTAGAGTKHVIKPIERSLKYWGIPKVYKCGLTLWAK FT NWSDMPLKKQNKYEKRLVKKSYAFYNSIKNKKVYIPLKTKILFSIFRNLMNRYVDGHKD FT KEYWRDKGWLQGKRPWSSPGHVNKL" FT CDS 1035011..1035619 FT /transl_table=11 FT /locus_tag="CBO0928" FT /product="putative phosphohydrolase" FT /db_xref="GOA:A5I0C0" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR013976" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5I0C0" FT /protein_id="CAL82481.1" FT /translation="MCGKYPNKNTAIKVLEQAEKLNPGPWKQHSEFVALACKNIAKHCT FT DMDSDKAYVLGLLHDIGRRVGVVSERHMVAGYQYCIEQGWDEVAKICVTHSFIIQDIDS FT AIGKWDVTKEEYELTKNIINSAVYDDYDLLVQLSDALALSTGFCLLEKRFVDVACRYGV FT NEYTIARWKKTIEIKDYFEEKIKCSIYDVLPNVKETTFA" FT misc_feature 1035086..1035442 FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 23.1, E-value 0.00019" FT /inference="protein motif:Pfam:PF01966" FT misc_feature 1035464..1035529 FT /note="Predicted helix-turn-helix motif with score FT 1688.000, SD 4.94 at aa 152-173, sequence FT KRFVDVACRYGVNEYTIARWKK" FT CDS 1035675..1036043 FT /transl_table=11 FT /locus_tag="CBO0929" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0C1" FT /protein_id="CAL82482.1" FT /translation="MFEDEYIIRLIKTGVKAAVALFAGKDAIKSAIDIENYNMTISGDE FT LLEFMIKKYISEGKINEAENILFEVIESQKTKKNLETALSFYKELSKWHEARLLKCNFS FT KLEIEQGLKDVRKLYEKD" FT CDS 1036165..1037439 FT /transl_table=11 FT /locus_tag="CBO0930" FT /product="putative membrane-associated MerR-family FT transcriptional regulator" FT /note="Similar to N-terminal regions of many MerR-family FT transcriptional regulators including Clostridium FT acetobutylicum transcriptional regulator, merr family FT cap0178 SWALL:Q97TD4 (EMBL:AE001438) (123 aa) fasta scores: FT E(): 0.00041, 36.97 38d in 119 aa" FT /db_xref="GOA:A5I0C2" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="UniProtKB/TrEMBL:A5I0C2" FT /protein_id="CAL82483.1" FT /translation="MKIKDAERLTGLSQKTIRYYESEGLISVKRNSNSYREYDENNINK FT LRRIKVLRKLDVPISTIKKLNLKEASLPEILEGKIKELDGNELNLERKKGIIEAILKEI FT NKNPNIDLAEYCKDFEYIESDEFTEFLGEIKELREVSLAYQILITLMLSGPLLWLFINI FT KNSNYEFIGINSILAIISTVLLTLIWRGFLKQKNKKVRGTGLVLLSVILIIVLSLVVFV FT GILKLQQFIFVPEDYLMFMFKPPYSYLIFFFELEIIIVFVSILYKRIKNAEWKWGAKLF FT QFVKKNIVGTIVLNIVLLYVCLTGITVVTKNKIMDYNFYSPTGTTYSYSDITKVQAGFK FT GKKFKIFKSHAGDFYYIVNFKDGKKINFYQANSALEDTYLELEIFDKSIMKASKVQKES FT SKENYQFCDFDKRYVDRFLRIIENR" FT misc_feature 1036165..1036230 FT /note="Predicted helix-turn-helix motif with score FT 1631.000, SD 4.74 at aa 1-22, sequence FT MKIKDAERLTGLSQKTIRYYES" FT misc_feature 1036168..1036278 FT /note="Pfam match to entry PF00376 merR, MerR family FT regulatory protein, score 26.4, E-value 7.1e-05" FT /inference="protein motif:Pfam:PF00376" FT misc_feature order(1036588..1036647,1036675..1036743,1036777..1036836, FT 1036894..1036962,1037023..1037091) FT /note="5 probable transmembrane helices predicted for FT CBO0930 by TMHMM2.0 at aa 142-161, 171-193, 205-224,244-266 FT and 287-309" FT /inference="protein motif:TMHMM:2.0" FT CDS 1037516..1037944 FT /transl_table=11 FT /locus_tag="CBO0931" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I0C3" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0C3" FT /protein_id="CAL82484.1" FT /translation="MNNYIIRESNSEEEADLVVDRLVKYNLSKVPGKQEVPLLWINRVI FT EDTNGEIIAGILTEMYCWNCIYIDALWVKEEYRKDRLGTKLLKEIEKIAKEKDCHLIHL FT DTFDFQAKDFYIRHGYEIFGVLDQCPENHKRYFMKKYI" FT misc_feature 1037645..1037878 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 51.4, FT E-value 2e-12" FT /inference="protein motif:Pfam:PF00583" FT CDS 1038195..1038896 FT /transl_table=11 FT /locus_tag="CBO0932" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003812" FT /db_xref="UniProtKB/TrEMBL:A5I0C4" FT /protein_id="CAL82485.1" FT /translation="MDKFIQNIKTAKDIKNSIYYKLRHEFLYHSNKIEGSTFTTESLAL FT LLDKNIVEGKHTLDDVQETVNSSYVFDYIIDTIDEEVDMRYIKYLHSMLKHNTTDYERG FT FSGVFKKIPNTILGTDVQLAQPYEVEYKLEELISWYYQNKIVDLDIIAEFHFRFEMIHP FT FQDGNGRIGRFLMLKQLLENNLPLFIISWDTEDLYRKALAKCSTGSYAPLVEYLKSLND FT FKEVNKALWDF" FT misc_feature 1038453..1038836 FT /note="Pfam match to entry PF02661 Fic, Fic protein family, FT score 80.8, E-value 3e-21" FT /inference="protein motif:Pfam:PF02661" FT CDS 1038926..1039447 FT /transl_table=11 FT /locus_tag="CBO0933" FT /product="putative nitroreductase" FT /db_xref="GOA:A5I0C5" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:A5I0C5" FT /protein_id="CAL82486.1" FT /translation="MLDLLKQRRSIRKFQQKPIEEEKVEALKKALLLAPSSRNIKPLEF FT IFLENKEVLSDISKCKPHGGTFIKDAALAVVILGDEDKSDVWVEDASIASIILQLEAES FT LGLGSCWSQIRNRSYDEDKMAEDYIKEKLNIKENYKVESIIAIGYKDEVKEPISEEKLD FT FNKIHVNKFY" FT misc_feature 1038938..1039372 FT /note="Pfam match to entry PF00881 FT Nitroreductase,Nitroreductase family, score 100.5, E-value FT 3.5e-27" FT /inference="protein motif:Pfam:PF00881" FT CDS 1039499..1039810 FT /transl_table=11 FT /locus_tag="CBO0934" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0C6" FT /protein_id="CAL82487.1" FT /translation="MEIINMKVVLNFIIFMILIICVEKIIEKTNIHVALINRIKKYKHY FT KKILFMGLMIVWFMVEVGKQSLNVRLGKHNIPSIVLGAIILGIYLKFLPYIFSKKEVS" FT misc_feature order(1039508..1039576,1039637..1039681,1039724..1039792) FT /note="3 probable transmembrane helices predicted for FT CBO0934 by TMHMM2.0 at aa 4-26, 47-61 and 76-98" FT /inference="protein motif:TMHMM:2.0" FT CDS 1039918..1040451 FT /transl_table=11 FT /locus_tag="CBO0935" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007344" FT /db_xref="UniProtKB/TrEMBL:A5I0C7" FT /protein_id="CAL82488.1" FT /translation="MSEEKQVRIIEVVPHNPRWKIGYEKEANKIYNIMQKEVIKIYHIG FT STSIEGIYAKPIIDILVEVKDISNVDNYNEEMKSLGYIPKGEYGIRGRRFFLKGLYDRT FT HHVHIFEKGDSEIERHINFRDYMIEHKEEAKQYEELKKELALKFRYDIDSYCIGKDSFI FT KKIDEKAKIWAEEK" FT misc_feature 1039918..1040427 FT /note="Pfam match to entry PF04229 UPF0157,Uncharacterised FT protein family (UPF0157), score 169.3,E-value 6.6e-48" FT /inference="protein motif:Pfam:PF04229" FT CDS 1040525..1041604 FT /transl_table=11 FT /gene="cbiD" FT /locus_tag="CBO0936" FT /product="cobalamin biosynthesis protein" FT /db_xref="GOA:A5I0C8" FT /db_xref="InterPro:IPR002748" FT /db_xref="UniProtKB/Swiss-Prot:A5I0C8" FT /protein_id="CAL82489.1" FT /translation="MLDLYVNCDGKKLRCGYTTGSCAAAAAKAAAIALFYNKKLEEINI FT DTPKGIELAIPIEKIVEDENFVECAVIKDGGDDVDITHGIEIWARAEKKSSGYTLKGGK FT GVGVVCGEGLYVKKGEPAINPVPCSMIEKEVRSVMPKDSGVEITIFVPKGEEIAKKTFN FT PRLNIIGGISILGTTGIVMPMSEDALKVSIELEINQKTCHGEKELILLFGNMGEKMAKE FT LNLKEDNMVIMSNYVGFALNCCMARKLEKVTIVGHIGKISKIASGCFNTHSRVCDTRLE FT TLALELALMGYDKDLVTKIYNEKTTEGAVNLLGEGYEKLYKNLGEKIIRKIEQYTYDSI FT KADIVMYSMEKGILYSSIE" FT misc_feature 1040579..1041439 FT /note="Pfam match to entry PF01888 CbiD, CbiD, score 328.1, FT E-value 1.1e-95" FT /inference="protein motif:Pfam:PF01888" FT CDS 1041781..1042431 FT /transl_table=11 FT /gene="cbiE" FT /locus_tag="CBO0937" FT /product="precorrin-6y C5,15-methyltransferase FT [decarboxylating]" FT /EC_number="2.1.1.132" FT /db_xref="GOA:A5I0C9" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR012818" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:A5I0C9" FT /protein_id="CAL82490.1" FT /translation="MNTIHKNLQFKKIYIVGLGPGHKDYMLSGAVNNLEKVDIIIGFKR FT AIESLDFIKNNKKVVNKISGILDYIKENKDKNISIVASGDPCFYGISNYIKNNYEGKIE FT VIPGISSYQYMMAKINESWQNSFLGSLHGREEEFIEKVKSYEKTIWLTDKKNSPDKLCK FT RLIENNIEAEVIVGENLSYKDERIIKGNPQELENMRFSDLTVVYIRVNSEMNV" FT misc_feature 1041814..1042368 FT /note="Pfam match to entry PF00590 FT TP_methylase,Tetrapyrrole (Corrin/Porphyrin) Methylases, FT score 16.7,E-value 3.7e-06" FT /inference="protein motif:Pfam:PF00590" FT CDS 1042658..1043161 FT /transl_table=11 FT /locus_tag="CBO0938" FT /product="putative membrane-associated CAAX amino terminal FT protease" FT /db_xref="GOA:A5I0D0" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5I0D0" FT /protein_id="CAL82491.1" FT /translation="MQKGYFSIKELKANVAKGKKFWVPVALTILGLILAYVVSYLPKML FT FPNLNDGMIGLKRDNWIKLILFAISTIVFPSLAEELFYRKALINFQSKTILFVSTIIGL FT FLFALEHSLSWYGILMAMIWGIPFSISYIKTKNIYIPMMAHFIVDLLGNGSSVIITAIY FT FLNK" FT misc_feature order(1042847..1042906,1042916..1042984,1042997..1043056, FT 1043084..1043152) FT /note="4 probable transmembrane helices predicted for FT CBO0938 by TMHMM2.0 at aa 21-40, 44-66, 71-90 and 100-122" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1042853..1043134 FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 40.1, E-value 5.3e-09" FT /inference="protein motif:Pfam:PF02517" FT CDS 1043354..1043929 FT /transl_table=11 FT /gene="cbiT" FT /locus_tag="CBO0939" FT /product="precorrin-8w decarboxylase" FT /EC_number="1.-.-.-" FT /db_xref="GOA:A5I0D1" FT /db_xref="InterPro:IPR014008" FT /db_xref="InterPro:IPR020596" FT /db_xref="UniProtKB/TrEMBL:A5I0D1" FT /protein_id="CAL82492.1" FT /translation="MRYIKDEEFIRGSCPMTKEDIRILSISKMNLEENSKVLDVGAGTG FT SVSIQAATICAKGQVFAIEKDEEALDIIKKNKEKFNCKNLKIIEGEALKVEESIKDSFD FT SIFIGGSGGGLEEIISRYGNKLLDQGTMVLNFITINNLNTALETLKNLNYKTECIQVSI FT SKARGKSNMLIANNPIFIITAIKNGGNL" FT CDS 1043929..1044360 FT /transl_table=11 FT /locus_tag="CBO0940" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:A5I0D2" FT /protein_id="CAL82493.1" FT /translation="MNKIKKIIVSSVVICLLGGIGIYKYIDTSHKKDLSISDVELNANA FT KWWTDNSSGNKYDVRFKSFDGKSVKKIASKKPNYAIKIDSKIKSGNLNIKIYDGKKALF FT NKNGTLDETITISNTDNKEVEIEITGKEAKDGYVKLKAM" FT sig_peptide 1043929..1044019 FT /locus_tag="CBO0940" FT /note="probabilty 0.769, with cleavage site probability FT 0.393 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT CDS 1044396..1044947 FT /transl_table=11 FT /locus_tag="CBO0941" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0D3" FT /protein_id="CAL82494.1" FT /translation="MNLEELRLDCSIKQKKGLHFILASIIIWCAVWVIHLTSLPIPTKN FT LFTFCCTAPLMPLAYMISKVIKVDFTNKENPLTNLGVLFSLNQMLYLLIAMWIYQEVPE FT KMLMVLAMIFGAHLMPYGWLYKSRTYIGMSVFIPIVVLIIGLNFKPHIIAVIMILFEIV FT FSLLLIVEIKKLTNIINHIS" FT misc_feature order(1044444..1044503,1044531..1044584,1044621..1044689, FT 1044717..1044770,1044783..1044839,1044849..1044905) FT /note="6 probable transmembrane helices predicted for FT CBO0941 by TMHMM2.0 at aa 17-36, 46-63, 76-98, FT 108-125,130-148 and 152-170" FT /inference="protein motif:TMHMM:2.0" FT CDS 1044995..1045309 FT /transl_table=11 FT /locus_tag="CBO0941A" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0D4" FT /protein_id="CAL82495.1" FT /translation="MKNKSSIKIIGKILGIVSLSIALVILFLILNHFLKTTSYQILEWL FT PLLVIFFIIPIGFSLGFLSIKIYFNKFARWGVILNGILFLVLYIFFLIKIFTLLFHVIV FT " FT CDS 1045415..1045636 FT /transl_table=11 FT /locus_tag="CBO0942" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0D5" FT /protein_id="CAL82496.1" FT /translation="MFINFVRGSCMKKSKIYNFLMWIIGFSLAELWRRLLKDIHIHEFF FT KWLIGLAIIILIFFIINKVISLLTKVKN" FT misc_feature order(1045460..1045510,1045553..1045621) FT /note="2 probable transmembrane helices predicted for FT CBO0942 by TMHMM2.0 at aa 16-32 and 47-69" FT /inference="protein motif:TMHMM:2.0" FT CDS 1045679..1046131 FT /transl_table=11 FT /locus_tag="CBO0943" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0D6" FT /protein_id="CAL82497.1" FT /translation="MIDWILLALLGGIIFKEFRIVKQLVIKTEKRTIDTIFLIIGIVVL FT FYIIYAYATTSRHYLLGLLGTIAYIVSYLKNGITSKGFVSSYRCLHFVPWNKVKEVHIK FT QGKSMKISYLGNGSSNRLYFKEKDYDKIIEILSKNLVNDLIIIDHN" FT misc_feature order(1045688..1045741,1045775..1045843,1045853..1045912) FT /note="3 probable transmembrane helices predicted for FT CBO0943 by TMHMM2.0 at aa 4-21, 33-55 and 59-78" FT /inference="protein motif:TMHMM:2.0" FT CDS 1046191..1046532 FT /transl_table=11 FT /locus_tag="CBO0944" FT /product="putative membrane protein" FT /db_xref="GOA:A5I0D7" FT /db_xref="InterPro:IPR013823" FT /db_xref="InterPro:IPR014719" FT /db_xref="UniProtKB/TrEMBL:A5I0D7" FT /protein_id="CAL82498.1" FT /translation="MKSKSWLIWIIGGICFMLAGILRIIKNRYLNGIIFIVLGFLYVAL FT SIINYKFANKPNRNTLSDEELKNMDNELRELVSEGERIKAIKKYRMATGAGLVEAKEYV FT DSLSKGETK" FT misc_feature order(1046203..1046256,1046275..1046334) FT /note="2 probable transmembrane helices predicted for FT CBO0944 by TMHMM2.0 at aa 5-22 and 29-48" FT /inference="protein motif:TMHMM:2.0" FT CDS 1046652..1047191 FT /transl_table=11 FT /locus_tag="CBO0945" FT /product="putative isochorismatase" FT /db_xref="GOA:A5I0D8" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:A5I0D8" FT /protein_id="CAL82499.1" FT /translation="MSNIALLVVDVQNALINVHPHNEQRVIENIKKLILTARDNKKEVV FT YVRHDDGKGTELENGTYGWQIYDKISPNSNKLIFEKQYNSAFHKTDLKEYLDIKNIDTI FT ILVGLQTEYCIDATCKSAFDYGYKIIIPEETNTTFANDYLSGEKLYEFYNYKIWNKRFA FT DVISVEEVIKILENDF" FT misc_feature 1046652..1047170 FT /note="Pfam match to entry PF00857 FT Isochorismatase,Isochorismatase family, score 31.7, E-value FT 3.9e-10" FT /inference="protein motif:Pfam:PF00857" FT CDS 1047486..1048202 FT /transl_table=11 FT /gene="cbiL" FT /locus_tag="CBO0946" FT /product="precorrin-2 C20-methyltransferase" FT /EC_number="2.1.1.130" FT /db_xref="GOA:A5I0D9" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR006364" FT /db_xref="InterPro:IPR012382" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:A5I0D9" FT /protein_id="CAL82500.1" FT /translation="MKDIYNNIEFENRDLNKKYGTLYGIGVGPGNEELLTIKAVKILES FT CDVVIAPTARENGESIAINTAKNFINPKAEIYLKYFPMKKEKEAEIYENYRFMKKLLSE FT GKNVVFLTIGDPFVYSTYIYLLQYMKNHNLNIETVPGITSFCAAASLAGETLVIGDEPL FT LILPGNRLDSIKDEKYLVIMKYYKNTEEVLDKLEEEGFKYVCVKRAYREGQEILRTREE FT ILNSKDYMSIIIANRE" FT misc_feature 1047546..1048157 FT /note="Pfam match to entry PF00590 FT TP_methylase,Tetrapyrrole (Corrin/Porphyrin) Methylases, FT score 77.0,E-value 4.1e-20" FT /inference="protein motif:Pfam:PF00590" FT CDS 1048221..1048985 FT /transl_table=11 FT /gene="cbiF" FT /locus_tag="CBO0947" FT /product="precorrin-4 C11-methyltransferase" FT /EC_number="2.1.1.133" FT /db_xref="GOA:A5I0E0" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR003043" FT /db_xref="InterPro:IPR006362" FT /db_xref="InterPro:IPR014776" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:A5I0E0" FT /protein_id="CAL82501.1" FT /translation="MESKVYFIGAGPGNPDLITVKGRDILTKADVVIYAGSLVSKEHLD FT YCKEGVEVYNSASMTLKEVINVIQKAHNENKSIVRLHTGDPSIYGAIKEQMDELDKLDI FT CYEVVPGVSSFAAAAAAIKKEFTLPGVSQTVILTRVEGRTPVPEKEDLEVLASRGASMA FT LFLSVGMIDKVVTKLRKGYGRNVPIAVIQRATWQDEKVVIGTLDDIAKRVKDANITKTA FT QILVGDFIDCKYDKSLLYDEKFTHEFRKGINE" FT misc_feature 1048230..1048850 FT /note="Pfam match to entry PF00590 FT TP_methylase,Tetrapyrrole (Corrin/Porphyrin) Methylases, FT score 175.3,E-value 1.1e-49" FT /inference="protein motif:Pfam:PF00590" FT misc_feature 1048242..1048286 FT /note="PS00839 Uroporphyrin-III C-methyltransferase FT signature 1." FT /inference="protein motif:ProSite:PS00839" FT CDS 1049276..1050328 FT /transl_table=11 FT /gene="cbiG" FT /locus_tag="CBO0948" FT /product="putative cobalamin biosynthesis protein" FT /db_xref="GOA:A5I0E1" FT /db_xref="InterPro:IPR002750" FT /db_xref="InterPro:IPR021744" FT /db_xref="InterPro:IPR021745" FT /db_xref="UniProtKB/TrEMBL:A5I0E1" FT /protein_id="CAL82502.1" FT /translation="MGNDIAYKIKEHMDADLYSKYVTKELIAEASLEYKHSHCKDNNLN FT LLNDKHYFKKEDFNFKEIVKKSFQDYDAIIFISSTGIAVRAIASFIQSKDKDPAVIVID FT STGKYVISLLSGHLGGANELTEKIAKTIGAEPIITTATDNLNIKAPDIIAKENNLVIED FT LKKAKDIAALLVNGQKVAFIDEEDLVNFPKGYTYDIESAKGIVFVTNKLHVDETFLNNK FT CILKLIRKDIVLGIGCRKNYDEGIMKENVIKVLKEENIDLKSINSIVSVEIKKDEKSIK FT ELSRFLECPFITYSVDEIKKVEHKFKGSEFVRKTIGVGSVCEPSIELKGAKIIKEKQKL FT NGMTLAIGKL" FT misc_feature 1049519..1050322 FT /note="Pfam match to entry PF01890 CbiG, CbiG, score 195.7, FT E-value 7.5e-56" FT /inference="protein motif:Pfam:PF01890" FT CDS 1050486..1051217 FT /transl_table=11 FT /gene="cbiH" FT /locus_tag="CBO0949" FT /product="precorrin-3b C17-methyltransferase" FT /EC_number="2.1.1.131" FT /db_xref="GOA:A5I0E2" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR006363" FT /db_xref="InterPro:IPR014776" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:A5I0E2" FT /protein_id="CAL82503.1" FT /translation="MGKLYVVGIGPGSLEHITVKAKKVLEESDIIIGYSKYIDYVKPLI FT EGKEVHTTGMKKEEERCQRALDLSKDKVVSVISTGDAGIYGMAGLILEMNKNKNLEIQI FT IPGVTASTSAASIIGAPLMHDNCNISLSDLMTPYELIKKRVKLAAEGDFVISLYNPKSK FT GRPYYLKECMDIIKEYRSNDTPIAVVKNALREGEEIRLYTLENFTDDFADMLSTVIIGN FT SSSFIKEGKFITRRGYKVNKD" FT misc_feature 1050492..1051109 FT /note="Pfam match to entry PF00590 FT TP_methylase,Tetrapyrrole (Corrin/Porphyrin) Methylases, FT score 135.4,E-value 1.1e-37" FT /inference="protein motif:Pfam:PF00590" FT CDS 1051351..1052118 FT /transl_table=11 FT /gene="cbiJ" FT /locus_tag="CBO0950" FT /product="precorrin-6x reductase" FT /EC_number="1.3.1.54" FT /db_xref="GOA:A5I0E3" FT /db_xref="InterPro:IPR003723" FT /db_xref="UniProtKB/TrEMBL:A5I0E3" FT /protein_id="CAL82504.1" FT /translation="MIALILGTSEGREILSLLNKFTDNILISTATAYGGEILKDYKYKK FT LNTKPLNKEQLLNMLKENQVNILIDASHPYALEVTKNAREVSKDLNIEYVRYERPSSAE FT EFKENKKVVFLEDYKDLNEALKNIKGNILNTSGSRNMDKILDLKLENRIIHRVLPSVKV FT LEDCFNLGVKVEDLMAIKGPISKELNKAFIKDYDAKALILKDSGPQGGTEEKILACLEC FT DIYALVIKRKKINYEREFNNIEILVEYISSMIN" FT misc_feature 1051351..1052103 FT /note="Pfam match to entry PF02571 CbiJ, Precorrin-6x FT reductase CbiJ/CobK, score 156.0, E-value 6.8e-44" FT /inference="protein motif:Pfam:PF02571" FT CDS 1052198..1052686 FT /transl_table=11 FT /locus_tag="CBO0951" FT /product="probable transport protein" FT /db_xref="InterPro:IPR024529" FT /db_xref="UniProtKB/TrEMBL:A5I0E4" FT /protein_id="CAL82505.1" FT /translation="MKTKRLVIMGLFIALSFVGANIKIMGSIAFDSMPAFLGTLILGPI FT MGAIIGAVAHFLSALTSGFPLSLPVHMIVMVDMAVTMILFGIVYNKFKNKNNILAAIVA FT TVVAVIINGPVSVFAIIPIAGKGVLALLPILSLAALANVIIAIIIYRFIPEKYFQRDK" FT sig_peptide 1052198..1052255 FT /locus_tag="CBO0951" FT /note="probabilty 0.996, with cleavage site probability FT 0.401 between residues 20 and 21" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1052210..1052263,1052300..1052368,1052396..1052464, FT 1052501..1052569,1052579..1052647) FT /note="5 probable transmembrane helices predicted for FT CBO0951 by TMHMM2.0 at aa 5-22, 35-57, 67-89, 102-124 and FT 128-150" FT /inference="protein motif:TMHMM:2.0" FT CDS 1052862..1053644 FT /transl_table=11 FT /gene="cbiK" FT /locus_tag="CBO0952" FT /product="cobalt chelatase" FT /EC_number="4.99.1.-" FT /db_xref="GOA:A5I0E5" FT /db_xref="InterPro:IPR010388" FT /db_xref="UniProtKB/TrEMBL:A5I0E5" FT /protein_id="CAL82506.1" FT /translation="MDKKKRAILVVSFGTSYEQSLKDCIESTENFIKESFKDYDIKRAF FT TSYMIINKILKRDSIKINNPIEALEELKKEGYEEVIVQPLHIMFGEEYEKIEKAVLEFK FT DKFKILKLGKPLLFKNEDYKIATEALKTQLPKLNKEEAIILMGHGTEHPANAAYFQFDY FT YLREHINPNIYLCSVESDPSIKSIIPKLKKSGVKNVLLMPFMLVAGDHANNDMAGEDEE FT SWKNVLEKEGFKVDLYLKGLGANREFQKIYRDHIKEEI" FT misc_feature 1052877..1053638 FT /note="Pfam match to entry PF06180 CbiK, Cobalt chelatase FT (CbiK), score 384.5, E-value 1.1e-112" FT /inference="protein motif:Pfam:PF06180" FT misc_feature 1053474..1053515 FT /note="PS00761 Signal peptidases I signature 3." FT /inference="protein motif:ProSite:PS00761" FT CDS 1053657..1054496 FT /transl_table=11 FT /gene="pduX" FT /locus_tag="CBO0953" FT /product="propanediol utilization protein" FT /db_xref="GOA:A5I0E6" FT /db_xref="InterPro:IPR006204" FT /db_xref="InterPro:IPR012363" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:A5I0E6" FT /protein_id="CAL82507.1" FT /translation="MEVTAKYPGSFGEILQGNLGEKPVLVSSPINLYTCVRLFESKKEK FT NFYKNIKANKFIKNILTDWKYEDYINTIHMEINSKIPRGKGLASSTADLCATYKCLIQL FT FKKNYSIEELQKHCLTIEPTDSIIFNEFILFDYKNGTLKEKLGPYIKFYILVFEGNRII FT NTLDFNNKNLKEMNSIEDLIPDLKESIEKRNIKNISRISEESIKRNFHRLTYDYFNTVE FT KYKNQTGGLGIIGCHSGDALGIVYDNKEDLLKAEKNIIDTGNLKKYTLETVLNVEEI" FT misc_feature 1053870..1054475 FT /note="Pfam match to entry PF00288 GHMP_kinases, GHMP FT kinases putative ATP-binding protein, score 36.7, E-value FT 5.5e-08" FT /inference="protein motif:Pfam:PF00288" FT CDS 1054644..1055165 FT /transl_table=11 FT /gene="cobA" FT /gene_synonym="btuR" FT /locus_tag="CBO0954" FT /product="cob(I)alamin adenosyltransferase" FT /EC_number="2.5.1.17" FT /db_xref="GOA:A5I0E7" FT /db_xref="InterPro:IPR003724" FT /db_xref="UniProtKB/TrEMBL:A5I0E7" FT /protein_id="CAL82508.1" FT /translation="MKEEKGYIQVYTGNGKGKTTAALGISLRAICSGKKVFFGQFTKGM FT KYSELKAPTILPNFTMEQFGRDKFIFGNPEEEDIKLAKEGLKKIEKILTSGDYDLVVMD FT EINIALYYGLFTVEEVIEVIDKRNPKIEVILTGRYAKEEIMEKADLVTEMKEIKHYYEK FT GVPARVGIES" FT misc_feature 1054647..1055162 FT /note="Pfam match to entry PF02572 FT CobA_CobO_BtuR,ATP:corrinoid adenosyltransferase FT BtuR/CobO/CobP, score 208.4, E-value 1.1e-59" FT /inference="protein motif:Pfam:PF02572" FT CDS 1055400..1056107 FT /transl_table=11 FT /locus_tag="CBO0955" FT /product="Crp-family transcriptional regulator" FT /db_xref="GOA:A5I0E8" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR001808" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012318" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:A5I0E8" FT /protein_id="CAL82509.1" FT /translation="MGVLILMNSSIKYKLKDLEIFSSLKNDELDMLANKSRVIDLKKGE FT ILFYERDSVDNVYIVLEGKVTLYRISENGQKRVVFIIDKGKFINEIILDKKPASICCEG FT FENSKVLSIKRNDLLYIMGGNFEFTQEVMFSMTNKIRRMYRQLKNTVPLKVEKRVAAKL FT WKLAKDYGEYGKNGEVIKLNITVTYLSEMLGSSRETISRALKELKNKELIYYEGKKIII FT KDRDKLSKFFKGM" FT misc_feature 1055502..1055780 FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 55.7, E-value 1.1e-13" FT /inference="protein motif:Pfam:PF00027" FT misc_feature 1055943..1056038 FT /note="Pfam match to entry PF00325 crp, Bacterial FT regulatory proteins, crp family, score 27.7, E-value FT 2.9e-05" FT /inference="protein motif:Pfam:PF00325" FT misc_feature 1055949..1056014 FT /note="Predicted helix-turn-helix motif with score FT 1854.000, SD 5.50 at aa 184-205, sequence FT ITVTYLSEMLGSSRETISRALK" FT CDS 1056197..1056961 FT /transl_table=11 FT /gene="nirC" FT /locus_tag="CBO0956" FT /product="putative nitrite transporter" FT /db_xref="GOA:A5I0E9" FT /db_xref="InterPro:IPR000292" FT /db_xref="InterPro:IPR024002" FT /db_xref="UniProtKB/TrEMBL:A5I0E9" FT /protein_id="CAL82510.1" FT /translation="MYSEEINKISNVAENKRDLLRNNRVGYLVSSALAGIYVGIGTILI FT FTLGGNLEAVNSSYVKLIMGLSFGIALSLVIMAGSELFTGNNMVMAIGTLNKKTTWKDA FT LSIWGNSFAGNLIGSMLLALIFVNAGLAKGSVGKFILKTAETKMTLSPMELFLRGLLCN FT ILVCLAVWCSLKMKEEAGKLIMIFWCLFAFISSGFEHSVANMTLFSIALFIPHGVGISV FT NGMAYNLIFVSLGNIIGGALFVGAAYYKISKK" FT misc_feature 1056197..1056955 FT /note="Pfam match to entry PF01226 FT Form_Nir_trans,Formate/nitrite transporter, score 254.6, FT E-value 1.5e-73" FT /inference="protein motif:Pfam:PF01226" FT misc_feature order(1056269..1056337,1056380..1056448,1056509..1056577, FT 1056659..1056718,1056755..1056823,1056866..1056934) FT /note="6 probable transmembrane helices predicted for FT CBO0956 by TMHMM2.0 at aa 25-47, 62-84, 105-127, FT 155-174,187-209 and 224-246" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1056422..1056451 FT /note="PS01005 Formate and nitrite transporters signature FT 1." FT /inference="protein motif:ProSite:PS01005" FT misc_feature 1056671..1056703 FT /note="PS01006 Formate and nitrite transporters signature FT 2." FT /inference="protein motif:ProSite:PS01006" FT CDS 1056981..1058009 FT /transl_table=11 FT /gene="asrA" FT /locus_tag="CBO0957" FT /product="anaerobic sulfite reductase subunit A" FT /db_xref="GOA:A5I0F0" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR014259" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5I0F0" FT /protein_id="CAL82511.1" FT /translation="MGFKIRKENFNSALKNLRKDFKVYGPTTLEGKGTFSDTDSIRYKE FT ISSVEEINFKEKSNFSFKEVILPITQTLFYFTEDNWIEPKTDKENILIFLRSCDLHGLK FT RIDNIYLKNGSEDPYYKAIRERVKFVVMGCSESFENCFCVSMGTNKSENYNLGINIDEE FT NVYVDIKDNSLEKYFNEVQIEEKLEIEPRSVKENKVKVNISDKINLAKIVNLDFWNEYS FT KRCIACGRCNFVCPTCTCFNMQDIFYKDNAKSGERRRVWASCQIDGYTNMAGGHGFRID FT KGQRMRFKVMHKVNDYKKRFGYHMCVGCGRCDDICPEYISFSNCINKLSNLVEEVNSNG FT CR" FT misc_feature 1057653..1057688 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature 1057875..1057946 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 11.7, E-value 0.0037" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 1057896..1057931 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 1057996..1058793 FT /transl_table=11 FT /gene="asrB" FT /locus_tag="CBO0958" FT /product="anaerobic sulfite reductase subunit B" FT /db_xref="GOA:A5I0F1" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR001834" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR012165" FT /db_xref="InterPro:IPR014260" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="InterPro:IPR019480" FT /db_xref="UniProtKB/TrEMBL:A5I0F1" FT /protein_id="CAL82512.1" FT /translation="MAADNVYMPFKSEILDIKKHTDIEYTFRMSYEGEVKPGQFFEVSL FT PKYGESPISVCEIGEGYVDLTIRRVGVVTDEIYNYNIGQSLFLRGPYGNGFNLDNYKNK FT EIVVVAGGTGVAPVKGIVDYFSKNPKECKEFNLIVGFKTINNILFKEDIEKWKENINVT FT VTLDVAEEGYKGNTGLVTKYIPELNIKDKENVQVVVVGPPIMMKFAVAEFLKLGIKEEN FT IWISQERKMCCGLGKCGHCKIDDTYICLEGPVFNYVKGKTLID" FT misc_feature 1058026..1058289 FT /note="Pfam match to entry PF00970 FT FAD_binding_6,Oxidoreductase FAD-binding domain, score FT 20.7, E-value 2.1e-06" FT /inference="protein motif:Pfam:PF00970" FT misc_feature 1058302..1058631 FT /note="Pfam match to entry PF00175 FT NAD_binding_1,Oxidoreductase NAD-binding domain, score FT 61.4, E-value 2e-15" FT /inference="protein motif:Pfam:PF00175" FT CDS 1058806..1059771 FT /transl_table=11 FT /gene="asrC" FT /locus_tag="CBO0959" FT /product="anaerobic sulfite reductase subunit c" FT /EC_number="1.8.1.-" FT /db_xref="GOA:A5I0F2" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR005117" FT /db_xref="InterPro:IPR006066" FT /db_xref="InterPro:IPR006067" FT /db_xref="InterPro:IPR014261" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5I0F2" FT /protein_id="CAL82513.1" FT /translation="MDINTKAIKKNAFRVTKHRGKTALRVRVPGGNLPVKYFAILAKIA FT EEYGNGKVHVTTRQGFEIPDLDFNKMDEINKLIQPVIEGLNISQDEVGKGYSAAGTRNV FT TSCIGNEVCPFANYNTTKFAKRIEKAIFPNDYHVKVALTGCPNDCIKARMHDFGILGMT FT EPQYDKYRCVGCQACVNNCKKRATGALRFENFKVIRDHEKCIGCGECIGKCPTGAWTRS FT KEKYYKLAIMGRTGKKNPRLAEDFIKWVDEDSIVKIIINTYDYIHEYIDKDAPGGKEHI FT GYIVDRTGYQEFKKWALKDVNLKEKAELAENINWSGIKYK" FT misc_feature 1058842..1059048 FT /note="Pfam match to entry PF03460 FT NIR_SIR_ferr,Nitrite/Sulfite reductase ferredoxin-like half FT domain,score 61.1, E-value 2.5e-15" FT /inference="protein motif:Pfam:PF03460" FT misc_feature 1059109..1059297 FT /note="Pfam match to entry PF01077 NIR_SIR, Nitrite and FT sulphite reductase 4Fe-4S domain, score 66.9, E-value FT 4.5e-17" FT /inference="protein motif:Pfam:PF01077" FT misc_feature 1059232..1059282 FT /note="PS00365 Nitrite and sulfite reductases FT iron-sulfur/siroheme-binding site." FT /inference="protein motif:ProSite:PS00365" FT misc_feature 1059298..1059369 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 16.4, E-value 0.00066" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 1059394..1059465 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 35.6, E-value 1.2e-07" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 1059415..1059450 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 1060125..1061147 FT /transl_table=11 FT /locus_tag="CBO0960" FT /product="putative molybdopterin biosynthesis protein" FT /db_xref="GOA:A5I0F3" FT /db_xref="InterPro:IPR001453" FT /db_xref="UniProtKB/TrEMBL:A5I0F3" FT /protein_id="CAL82514.1" FT /translation="MKKVPVKEAIGYVLCHDITQIIPGKIKDRAFKKGHIIREEDVPVL FT LSLGKDNIYIWEKKEGYLHENEAAERLKNLSAGDGLAFSEVKEGKINFIANRDGILKID FT KELLMQLNLIDEVMLATRHNNMPVEKGEKVAGTRVIPLVIDEKKILEAEKLTKGKKIVS FT VKPYKKLKVGLIVTGNEVYYGRIKDAFSPVIEEKLSKFDCQIIDKVILSDNPKIITETI FT ENYIDKGADLILCTGGMSVDPDDTTPTAIKNTGGEIISYGAPVLPGAMFLVAYKDDIPI FT LGLPGCVMYAKTTIFDLVLPRVIAGERVTREELAAYGHGGFCAGCEVCRYPNCGFGKGW FT " FT misc_feature 1060629..1061027 FT /note="Pfam match to entry PF00994 MoCF_biosynth, Probable FT molybdopterin binding domain, score 110.6, E-value 3.2e-30" FT /inference="protein motif:Pfam:PF00994" FT CDS 1061459..1062259 FT /transl_table=11 FT /gene="modA" FT /locus_tag="CBO0961" FT /product="molybdate-binding periplasmic protein precursor" FT /db_xref="GOA:A5I0F4" FT /db_xref="InterPro:IPR005950" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:A5I0F4" FT /protein_id="CAL82515.1" FT /translation="MKNIKKISSIFIVFSLFTSILVGCANSKSTEAVKKEETKVESLVV FT FSGAGLKRPMEEIGKMFEKENNIKIEYIFAGSTQLISQMELGNKGDVFIVGSVKTYDIA FT KDKNLVNQYKKVAHHTPAIAVQKGNPKNIKSLEDMANPGMKIILGDEKANAIGITAQKI FT IKKNDLPNINKNVISKAATVNEIVAQLTTGKADAAIVTADSIFENKDVEAIQIPKDKNI FT DQIIPVCSLKNSKNKELAEKFVDLVASDKGKKIFAKHGFHPVEK" FT sig_peptide 1061459..1061549 FT /gene="modA" FT /locus_tag="CBO0961" FT /note="probabilty 1.000, with cleavage site probability FT 0.288 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1061477..1061533 FT /note="1 probable transmembrane helix predicted for CBO0961 FT by TMHMM2.0 at aa 7-25" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1061492..1062220 FT /note="Pfam match to entry PF01547 SBP_bac_1, Bacterial FT extracellular solute-binding protein, score 25.6, E-value FT 0.00012" FT /inference="protein motif:Pfam:PF01547" FT misc_feature 1061498..1061530 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1062279..1063061 FT /transl_table=11 FT /gene="modB" FT /locus_tag="CBO0962" FT /product="molybdenum ABC transporter, permease protein" FT /db_xref="GOA:A5I0F5" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR006469" FT /db_xref="UniProtKB/TrEMBL:A5I0F5" FT /protein_id="CAL82516.1" FT /translation="MNNKSFNCLLYVFFIITILFLIAPLFLLINRGVVYIIPCLRSEEV FT LFSIKLSLKTAIISTFICLIFSIPTSYILVRHEFKYKKLISSIIYLPMSLPHIVSGIAL FT LLLFGKSSFGNFLYNKLNLDFIFTVKGIILAQVFVNLSFTIKILATSLEESNTRMEFIA FT RTLGCNEFEAFRYITIPKLKKGTITAIIMTWSRALGEFGAVMMVAGSTRMKTEIIPTSI FT FLNMSTGDLDTAIGVATILIIISLISIITFEIIDKKKS" FT sig_peptide 1062279..1062381 FT /gene="modB" FT /locus_tag="CBO0962" FT /note="probabilty 0.757, with cleavage site probability FT 0.296 between residues 35 and 36" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1062297..1062365,1062444..1062503,1062537..1062605, FT 1062648..1062707,1062831..1062899,1062975..1063043) FT /note="6 probable transmembrane helices predicted for FT CBO0962 by TMHMM2.0 at aa 7-29, 56-75, 87-109, FT 124-143,185-207 and 233-255" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1062411..1063058 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 36.6, E-value 6.1e-08" FT /inference="protein motif:Pfam:PF00528" FT CDS 1063076..1063774 FT /transl_table=11 FT /locus_tag="CBO0963" FT /product="putative molybdenum ABC transporter, ATP-binding FT protein" FT /db_xref="GOA:A5I0F6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I0F6" FT /protein_id="CAL82517.1" FT /translation="MLDISNLSIKNSKFSLKSINITLRNGEYFVLLGKSGVGKTVFLET FT IAGRYSINSGSISFNGKELSILPPEKRDIGFVYQNYELFPYMKVWENIGFALKIRNLPK FT KHIRYKVDEIMEILSISQIKDRYPENLSGGEKQRVAIGRALILSPKLLLLDEPMSALDY FT STKDRLKWMLKDIYMKFNPTVIHVTHDIDEALFFSDKIGIMKNKTISNVFDINDGIKNK FT GKEFFYEYIQ" FT misc_feature 1063151..1063696 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 174.2, E-value 2.3e-49" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1063172..1063195 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1063466..1063510 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1063758..1064486 FT /transl_table=11 FT /locus_tag="CBO0964" FT /product="putative membrane protein" FT /note="Similar to the C-terminal region of Methanobacterium FT thermoautotrophicum hypothetical protein Mth922 mth922 FT SWALL:O27005 (EMBL:AE000867) (111 aa) fasta scores: E(): FT 1.1e-09, 41.74 38d in 103 aa" FT /db_xref="InterPro:IPR007161" FT /db_xref="UniProtKB/TrEMBL:A5I0F7" FT /protein_id="CAL82518.1" FT /translation="MNIYNELKERLKNIVLENNLFEDQVFITTKSLNPKEAIGETKRKD FT FPILNGKENMIEAKFKGSTGQAFTSSPSIFQGSLSEVLTLDLNDDYNKAIFIATSNAIL FT KYLGLIESTVHCKNEEPELCGEKHLNYLKEFYSDSKIALVGFQPSILEHIKDNFHVRVL FT DLNADNIGKIKYGTLIEDGKKDYQSVIDWADIVLCTGSTICNRSIVNFLNLNKKVIFYG FT TTIASAAYLLGLKRVCFYGK" FT misc_feature 1064409..1064477 FT /note="1 probable transmembrane helix predicted for CBO0964 FT by TMHMM2.0 at aa 218-240" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1064605..1064952) FT /transl_table=11 FT /locus_tag="CBO0965" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0F8" FT /protein_id="CAL82519.1" FT /translation="MSFEINKKDLTKNGIFLILSFVSLTLPITIILNSNNKPDDPSLLS FT LLFLGYPIICLILGFISGILKVNLLVELILLFLSLFFVMLFFLNVSALIYTPFYIFLNI FT IAVLLIKNLTT" FT CDS 1065317..1066336 FT /transl_table=11 FT /locus_tag="CBO0966" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0F9" FT /protein_id="CAL82520.1" FT /translation="MIGWEIKKIAKSKTTLIAMAIFILLTSIMAIIKPTLEDEIKHVNE FT QYETVVDKRSPIVIGKENFNKKIDGLVEASKSKGKDSMEKGIAEDSKKKIENIKDNEYK FT EVNFWKVFSYRSTHPVASFFMLIMIMLIVSNIHINEKISSVDNLILSSKNKFKCLYSKM FT FLAILIPVIFYSAYLGLEFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIINYVSSK FT IFVMYLVLISISLVIFLFSSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLIILDKV FT NYIDMLSYFDINIGMNWGQISIFGNNFDLINFSIGIVASIIILSTLLITINFKKFITN" FT sig_peptide 1065317..1065425 FT /locus_tag="CBO0966" FT /note="probabilty 0.933, with cleavage site probability FT 0.509 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1065353..1065412,1065662..1065730,1065806..1065874, FT 1065983..1066039,1066058..1066126,1066247..1066315) FT /note="6 probable transmembrane helices predicted for FT CBO0966 by TMHMM2.0 at aa 13-32, 116-138, 164-186,223-241, FT 248-270 and 311-333" FT /inference="protein motif:TMHMM:2.0" FT CDS 1066357..1067244 FT /transl_table=11 FT /locus_tag="CBO0967" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I0G0" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I0G0" FT /protein_id="CAL82521.1" FT /translation="MNKLEIKNLNKRFGVKKATNDITITLENGVYGLLGPNGAGKTTLM FT KQITTLLTPDSGEIIFNGKNVKENEDEYRGYIGYLPQDFEAYKNFSAKEFLSYMAALKG FT LDKGQAKDKIDELLHLVGLYDVRNKKVGKFSGGMKRRVGIAQVLLNDPKIMVLDEPTAG FT LDPQERSRFRNLIADISRDKIIILSTHIISDIESVAKETIMIKNGALLMQGTHEDILGG FT MKNRVYLIRTKDEREIAQIQQKYKIVNFQRGIDHTEVRVVSETIPSFKDVDIATPKFED FT VYMFYFDLEDTKEV" FT misc_feature 1066438..1066980 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 187.9, E-value 1.7e-53" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1066459..1066482 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1066756..1066800 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1067248..1068024 FT /transl_table=11 FT /locus_tag="CBO0968" FT /product="putative transporter" FT /db_xref="UniProtKB/TrEMBL:A5I0G1" FT /protein_id="CAL82522.1" FT /translation="MGRIIKFEMKKMLLRLGVIIPWILVAMLSTILLNTAGNDVVEIYA FT SVFDKSYGIAPLIGLLTFTIVSGSYTKEYDNNMVGLINSTKNGKRNIVKAKAIAAGIAV FT SIVNLSIVLIIYLSALRKTGGKGLDLPLKSLWYFEKSGSNIKVYQMMIIMIVTVIIGSF FT IFAQIGLLLSSISKSAVIPFIFGGLIMGIPYLLEGFLVRAGNKGSFLPYTPLWGMYSSQ FT IVRHKASMGMALGTLAVIFIIAMTVLSKASNKAFSK" FT sig_peptide 1067248..1067359 FT /locus_tag="CBO0968" FT /note="probabilty 0.995, with cleavage site probability FT 0.736 between residues 38 and 39" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1067284..1067343,1067401..1067460,1067539..1067607, FT 1067695..1067763,1067782..1067850,1067929..1067997) FT /note="6 probable transmembrane helices predicted for FT CBO0968 by TMHMM2.0 at aa 13-32, 52-71, 98-120, FT 150-172,179-201 and 228-250" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 1068170..1068224 FT /note="intergenic repeat 2" FT repeat_region 1068225..1068271 FT /note="intergenic repeat 3" FT CDS 1068669..1069391 FT /transl_table=11 FT /locus_tag="CBO0970" FT /product="two-component response regulator" FT /db_xref="GOA:A5I0G2" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0G2" FT /protein_id="CAL82523.1" FT /translation="MDAISLNNKKILIIDDEEDIVRLIRTVLKKEGFQNIYYATNLEDG FT FKEFNKVEPDIIILDIMLPDGEGYELCKTIRAKSKVPILFLSAKGEEIDKILGFAIGGD FT DYITKPFSTKELAYRVKAHLRRYSYVENANEEKNILSFGPFELNISKAEFKKDREIIEL FT KPKELALITFFAKHPNQIISKEKICDNVWGEDYYGFDNTIMVHIRRLREKIEKEPSRPE FT YLINVKGLGYKLVIKNEK" FT misc_feature 1068693..1069052 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 121.9, E-value 1.3e-33" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 1069137..1069370 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 83.0, E-value 6.3e-22" FT /inference="protein motif:Pfam:PF00486" FT CDS 1069381..1070802 FT /transl_table=11 FT /locus_tag="CBO0971" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5I0G3" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5I0G3" FT /protein_id="CAL82524.1" FT /translation="MKNNMKWRITGRFLVTVICVVITVVIINIVSLIGLAIYRNANEIS FT SKKYKIEDSVRNFSSNIKEADNKIYIDDKGKAILDSNNGWIQIIDANNNEVYSYKKPSY FT IKNKPTAAEIVNLHKYKTSDKGSELSTNFVAEKNIGNKRLTYIMGLQNNDINKYVVTTK FT NSEVIQLIKSATIIIIIVDGIIALIFGYLFIRKLTNPLGEILLGIKKLENEEYDLYYEA FT KGMYNDLYYSLNNLSDRLQENKRNRKKLDNMREEWISNISHDIKTPLASIQGYAEIIKD FT EDYDFTKEEIGEYAEIIENKSKYIKELVEDLNLSTRLKNNTLTLNKEKINLVNLIKDII FT IDILNDTRYENREIDFHCENDNIEINGDRILIRRAIINILFNAIVHNSEDVKINVTLKK FT QDKISIIIEDNGRGIKGEELNRIFDRYYRGTNTGERHKGSGLGMAISKETIVAHGGDIT FT IESELGKGTKVNILI" FT sig_peptide 1069381..1069474 FT /locus_tag="CBO0971" FT /note="probabilty 0.985, with cleavage site probability FT 0.472 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1069423..1069491,1069888..1069956) FT /note="2 probable transmembrane helices predicted for FT CBO0971 by TMHMM2.0 at aa 15-37 and 170-192" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1070137..1070343 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 67.3, E-value 3.4e-17" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 1070479..1070799 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 101.4, FT E-value 1.9e-27" FT /inference="protein motif:Pfam:PF02518" FT repeat_region 1070974..1071126 FT CDS complement(1071180..1071950) FT /transl_table=11 FT /gene="fecE" FT /locus_tag="CBO0972" FT /product="putative iron(III) dicitrate ABC FT transporter,ATP-binding protein" FT /db_xref="GOA:A5I0G4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I0G4" FT /protein_id="CAL82525.1" FT /translation="MKLKLEGIKYDIGSKKLLRGIDLNVEKNHFVGLIGPNGCGKTTLL FT KNIYKYLTPKEGSVYIDDKNIYGMKNKELSRLMAVVMQEHSLEFDFSVKEIVAMGRFSS FT NNRFASVDEEDEKFIEKSLKNVGLEKCEDRSFLSLSGGEKQRVMIAMALCQNTELIVLD FT EPTNHLDIKYQLQIIHMLRHLDITTFTTLHDMNIAATFCDYIYVMKKGKIVTHGPVEKV FT FTEEMFREVFEVEAHIYRNPYNNKLNVSYLTCCK" FT misc_feature complement(1071318..1071869) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 181.3, E-value 1.7e-51" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(1071492..1071536) FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1071825..1071848) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1071951..1073030) FT /transl_table=11 FT /locus_tag="CBO0973" FT /product="putative iron(III) dicitrate ABC FT transporter,permease protein" FT /db_xref="GOA:A5I0G5" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5I0G5" FT /protein_id="CAL82526.1" FT /translation="MVIRMNNNKQILKCKNNCTLKFILLIIALFVITTVCITFGSVKID FT VGVTFKSLINNILNKEIFAKDWPNNIDNIVFKLRLPRLLLAIVSGGALALVGILMQTLT FT RNSLADPYILGISSGASAGATLSIVLGVLSSFGHFGIALGAFLGAMIASIMVFKISGVS FT KVYSKTKLILTGVAVSSIFTAVTNFIITFARNDSLVKSAVFWTIGSLAGANYNQVKFSL FT VIMVITAILSMLLYKDLDAMLLGEAVAKNIGINTKFIIRFIMIASTLLTGTIVAFTGII FT GFVGLIVPHIARQMVGSSHKKLIPFGIVIGSILMVITDTIARTILSPQEVPIGVITAFL FT GGPFFLYLMQKSTYRFGGK" FT misc_feature complement(1071978..1072913) FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 363.0, E-value 3.3e-106" FT /inference="protein motif:Pfam:PF01032" FT misc_feature complement(order(1071987..1072040,1072053..1072121, FT 1072158..1072226,1072239..1072307,1072326..1072394, FT 1072452..1072520,1072554..1072622,1072632..1072700, FT 1072734..1072793,1072905..1072973)) FT /note="10 probable transmembrane helices predicted for FT CBO0973 by TMHMM2.0 at aa 20-42, 80-99, 111-133, FT 137-159,171-193, 213-235, 242-264, 269-291, 304-326 and FT 331-348" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(1072901..1073030) FT /locus_tag="CBO0973" FT /note="probabilty 0.995, with cleavage site probability FT 0.361 between residues 42 and 43" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1073031..1074053) FT /transl_table=11 FT /locus_tag="CBO0974" FT /product="putative iron(III) dicitrate-binding protein" FT /db_xref="GOA:A5I0G6" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:A5I0G6" FT /protein_id="CAL82527.1" FT /translation="MNKKLIAITLSTLVLVGGITGCSNKSTSTSSDSTKTEQSADKPLK FT LDFVQTSRHDDSANKFSMVYDKKPEKSLAITNCMIEMMLSMGLQDKMAGTAYAENNILP FT DLKPAYDKVPVMSKTYPSKEQILSNGVDFIIGWGGDFNDKGVGSIDWLNENKIKAYIPR FT SVNPDATVDSIYEDFKNLGIIFDKEDKAKELTEKMKSELKETTDKIKNVDKKVKVLGYD FT SGKDKAVVVGKGINNEIIKLAQGENVFGDMKKDYPEVSMEEIIKRNPDVIMVLEYSVGN FT GGDTFENKVKALKANPALKDVNAIKNNKFIKVELTELYPGVRVPKTVNKLAKEFYPDKF FT " FT misc_feature complement(1073109..1073849) FT /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic FT binding protein, score 45.2, E-value 1.6e-10" FT /inference="protein motif:Pfam:PF01497" FT sig_peptide complement(1073960..1074053) FT /locus_tag="CBO0974" FT /note="probabilty 1.000, with cleavage site probability FT 0.621 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature complement(1073988..1074020) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1074611..1076371) FT /transl_table=11 FT /gene="dhaK" FT /locus_tag="CBO0975" FT /product="dihydroxyacetone kinase" FT /EC_number="2.7.1.29" FT /db_xref="GOA:A5I0G7" FT /db_xref="InterPro:IPR004006" FT /db_xref="InterPro:IPR004007" FT /db_xref="InterPro:IPR012736" FT /db_xref="InterPro:IPR012737" FT /db_xref="UniProtKB/TrEMBL:A5I0G7" FT /protein_id="CAL82528.1" FT /translation="MKKIINRPETVVMEMCNGIAMAHPELEFVRKYKVMKKKNINKNKV FT SLISGGGSGHEPAHAGFIGKGMLDAAVCGDIFASPSQIQVYKAIKATASEKGTLLIIKN FT YSGDIMNFKNAAHLASEDGIKVDYVKVDDDIAVEDSLYTVGRRGVAGTVLVHKIAGAAA FT ELGFSLEKVKSIAEKAVSNVRSLGFAFSSCTVPAKRTPTFQLAEDEMEFGVGIHGEPGI FT VREKVATADELAKKIVDSILKDMKIDGSNNEEVALLINGFGATPLQELYLFNNSVTAEL FT AKKNIKINRTFVGNYMTSIDMEGASVSIMKLDDELKELLSKESDTPAFKVSGPVESVEY FT ISLEDNNDIENEVSFDLETCECHSEIKDKKITLDNMIYIIDKMSEVIIANEVHFCELDS FT HAGDGDFGMSVAKGFKQLKREWKHILKEDNMNIGKFLNECSLIIMEHCGGASGPIWGSA FT FRSAGKQVGDKKELSVSDFAQMMQAAVKGIQATGERSFGRGAVVGDKTLIDALVPCADL FT WSESANNNTSIHEAFQKGAAAAVKGAKMTEEIVARMGRAGTVGERSIGYPDAGAYGLGV FT IFTEISNSLK" FT misc_feature complement(1074623..1075177) FT /note="Pfam match to entry PF02734 Dak2, DAK2 domain,score FT 80.7, E-value 3.1e-21" FT /inference="protein motif:Pfam:PF02734" FT misc_feature complement(1075367..1076344) FT /note="Pfam match to entry PF02733 Dak1, Dak1 domain,score FT 488.0, E-value 7.8e-144" FT /inference="protein motif:Pfam:PF02733" FT CDS complement(1076382..1077512) FT /transl_table=11 FT /gene="gldA1" FT /locus_tag="CBO0976" FT /product="glycerol dehydrogenase" FT /EC_number="1.1.1.6" FT /note="Also similar to CBO1999 (52.5 38d)" FT /db_xref="GOA:A5I0G8" FT /db_xref="InterPro:IPR001670" FT /db_xref="InterPro:IPR016205" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:A5I0G8" FT /protein_id="CAL82529.1" FT /translation="MRKAFICPTKYVQGEDELLNLGYFVKSFGESALLIAHKDDIKRVK FT DKLDSTAKKFGITFVESSFCGECSREEVARLQEIAKNNKCACTIGLGGGKAIDTAKCVA FT KGNSLIIVPTIAATDAPTSHSAVLYTPDGAFDDYAYFWQSPTVILIDTTVIANAPTRFL FT VSGMGDALSTYFEARATSNSFSNVNAGLPCGVREGLCPPAKGTNTALTLAKACYKTLLE FT DGVKAKIASDCNLVTQALENIIETNILLSGLGFESAGLAAAHAIHDGLTILEGTHKYFH FT GEKVAFGTIAQLVLENAPKEEIDEVINFCLEIGLPVCLEDIGVDSITDEELMEVAKKSC FT IEEESIHSMPFKVTPEAVAAAIITADTLGKKYKSNK" FT misc_feature complement(1076439..1077491) FT /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing FT alcohol dehydrogenase, score 151.7, E-value 1.4e-42" FT /inference="protein motif:Pfam:PF00465" FT misc_feature complement(1076985..1077071) FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1." FT /inference="protein motif:ProSite:PS00913" FT CDS complement(join(1077824..1078300,1078300..1078860)) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO0977" FT /product="AraC-family transcriptional regulator" FT /note="Pseudogene. This CDS appears to have a frameshift FT mutation around codon 187. The frameshift occurs within a FT polymeric tract of (A)6." FT /db_xref="PSEUDO:CAL82530.1" FT /inference="protein motif:ProSite:Pseudog" FT misc_feature complement(1077842..1077976) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 33.3, E-value 5.7e-07" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(1077857..1077985) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature complement(1077992..1078132) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 29.8, E-value 6.8e-06" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(1078028..1078093) FT /note="Predicted helix-turn-helix motif with score FT 1853.000, SD 5.50 at aa 52-73, sequence FT ITAKKLAEVCHISPSYFSRLFA" FT repeat_region 1079105..1079148 FT CDS 1079238..1079414 FT /transl_table=11 FT /locus_tag="CBO0979" FT /product="conserved hypothetical protein" FT /note="Similar to the C-terminal region of Clostridium FT tetani conserved hypothetical protein ctp46 SWALL:Q899W9 FT (EMBL:AF528097) (146 aa) fasta scores: E(): 1.7e-10,59.64 FT 38d in 57 aa" FT /db_xref="UniProtKB/TrEMBL:A5I0H0" FT /protein_id="CAL82531.1" FT /translation="MEDSQKKINDIVYVKMNYSVEITDSQNKSIGGSRNIPITLTVKIT FT GDSWYIIEEEEPA" FT CDS 1079449..1079913 FT /transl_table=11 FT /locus_tag="CBO0980" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I0H1" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0H1" FT /protein_id="CAL82532.1" FT /translation="MNIRIYQSEDCREIVELFYNTVHSINSRDYNSAQLDVWAPKEIDI FT VSWDKSFSQHCSIVAEESDVIIGFGDLDATGYLDRLYVHKDYQGIGVATTIVSELENYA FT QENHISIVTTNASITAKPFFKKRGYEVVKEQFVERNGQFLKNFIMKKVLR" FT misc_feature 1079620..1079838 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 61.5, FT E-value 1.9e-15" FT /inference="protein motif:Pfam:PF00583" FT CDS 1079940..1080383 FT /transl_table=11 FT /locus_tag="CBO0981" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I0H2" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0H2" FT /protein_id="CAL82533.1" FT /translation="MEIKIIEENKRSFLDLLLLADEQESMIDKYLNRGEMFALYDGDLK FT SICVVTNEEEGIYEIKNLATYEKYQGQGYGSRLIKFIFEYYKDNCKTMLVGTGDSPLTI FT PFYKHCGFKISHRIKNFFIDNYDHPIYESGVQLIDMVYLKKDF" FT misc_feature 1080045..1080278 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 44.3, FT E-value 2.9e-10" FT /inference="protein motif:Pfam:PF00583" FT CDS 1080536..1081129 FT /transl_table=11 FT /locus_tag="CBO0982" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR009784" FT /db_xref="InterPro:IPR013320" FT /db_xref="InterPro:IPR015987" FT /db_xref="UniProtKB/TrEMBL:A5I0H3" FT /protein_id="CAL82534.1" FT /translation="MFRFNTKEGKWFFQPKNYLIEEDKVEIITEPNTDFWQRTYYGFRN FT DNAHVLYVTTDEKYFSFTVKTDFNSTALFDQCGLAIYQNSENWAKACIEFHDNNTSWLG FT SVVTNHGYSDWATMDIGSSVKSMWYRLSRRGSDYCFENSFDGINFKQMRIFHLFEGAKE FT INFGLLACSPSKNSFKATFTEMKITDCLWEEHKA" FT CDS 1081192..1081395 FT /transl_table=11 FT /locus_tag="CBO0983" FT /product="hypothetical protein" FT /note="Similar to the C-terminal region of Bacteroides FT thetaiotaomicron hypothetical protein bt2376 SWALL:Q8A566 FT (EMBL:AE016935) (178 aa) fasta scores: E(): 0.00026,32.25 FT 38d in 62 aa" FT /db_xref="InterPro:IPR024265" FT /db_xref="UniProtKB/TrEMBL:A5I0H4" FT /protein_id="CAL82535.1" FT /translation="MYGKKEIEQFESRRDEFSDYMKEIFNETKHYHDGKWLLIRIQDDK FT YINELIEMIKIKKKSKKNILHK" FT CDS 1081513..1082358 FT /transl_table=11 FT /gene="dkgA" FT /locus_tag="CBO0984" FT /product="2,5-diketo-D-gluconic acid reductase" FT /EC_number="1.1.1.274" FT /db_xref="GOA:A5I0H5" FT /db_xref="InterPro:IPR001395" FT /db_xref="InterPro:IPR018170" FT /db_xref="InterPro:IPR020471" FT /db_xref="InterPro:IPR023210" FT /db_xref="UniProtKB/TrEMBL:A5I0H5" FT /protein_id="CAL82536.1" FT /translation="MQDIKSYTILNNGVKMPWLGFGTYKVENGDTVIQSVKEALKIGYG FT HIDTASYYGNEEGVGTAIKESRIPRKDIFLVSKVWNSEQGYDKTLKSFEDSIKKLGTDY FT LDLYLIHWPQPLSKETWKALEKLYKEGRVKAIGVSNFLVDHLKWLLEDAEIMPIVNQVE FT FHPQLIQKDLIEFCSKNNIQLEAWSPLMRGKVFEIELLQDIARKYGKTISQIVLRWDLQ FT MGVVTIPKSINPSRIKENADIFDFEISKEDMDKIQQLDKGLRVGSDPNKVYPCQSISNK FT " FT misc_feature 1081540..1082301 FT /note="Pfam match to entry PF00248 aldo_ket_red, Aldo/keto FT reductase family, score 440.2, E-value 1.9e-129" FT /inference="protein motif:Pfam:PF00248" FT misc_feature 1081882..1081935 FT /note="PS00062 Aldo/keto reductase family signature 2." FT /inference="protein motif:ProSite:PS00062" FT misc_feature 1082194..1082241 FT /note="PS00063 Aldo/keto reductase family putative active FT site signature." FT /inference="protein motif:ProSite:PS00063" FT CDS 1082459..1082782 FT /transl_table=11 FT /locus_tag="CBO0985" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007076" FT /db_xref="UniProtKB/TrEMBL:A5I0H6" FT /protein_id="CAL82537.1" FT /translation="MASNIEFVEYVCDQISGAGDITYKKMFGDYGVYCNEKIIGLICDN FT QFFLKITKAGKDLLHEAIEAPAYKGAKPSFLIESLDNREYLAKIVSATYKELPMPKPKK FT TKK" FT misc_feature 1082477..1082755 FT /note="Pfam match to entry PF04993 TfoX_N, TfoX N-terminal FT domain, score 117.3, E-value 3.1e-32" FT /inference="protein motif:Pfam:PF04993" FT CDS 1082828..1083682 FT /transl_table=11 FT /locus_tag="CBO0986" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I0H7" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0H7" FT /protein_id="CAL82538.1" FT /translation="MFIYDTLENIGIETLHETFLNAFSDYQVKMDLPLFKFQHMLQRRG FT YVSKVSIGAFNNETLVGFVLNGVRNWDGKLTAYDTGTGIIEAYRKQGITSNMLLNVRRL FT FQQMGVEQYLLEVIQSNTSALQLYKKQGFKILRDFQCFHLDKNKYNPITTYKVEHVDMI FT NPNDWRELTEFWDFAPSWQNSIDSINAVSDSFIYSIVHLDDNIVGYGVIDKKTGDIPQI FT AVNKNYRRKGIAKSIITDLMKNTESYNINVINVDGRSKSMKDFLLKLGFECGVSQYEMI FT LKL" FT misc_feature 1082981..1083229 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 43.6, FT E-value 4.6e-10" FT /inference="protein motif:Pfam:PF00583" FT misc_feature 1083419..1083643 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 22.9, FT E-value 0.00078" FT /inference="protein motif:Pfam:PF00583" FT CDS 1083892..1084206 FT /transl_table=11 FT /locus_tag="CBO0987" FT /product="PadR-family transcriptional regulator" FT /db_xref="InterPro:IPR005149" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0H8" FT /protein_id="CAL82539.1" FT /translation="MNINKNLPLTETTYYILLALLEPGYGYIIMEKVEELSNYQVKIAA FT GTLYGAIENLLKQKLIKFVGTEDNRRKVYVITEKGKEVLLLDIERMRHMINIAESNFKL FT " FT misc_feature 1083907..1084152 FT /note="Pfam match to entry PF03551 PadR, Transcriptional FT regulator PadR-like family, score 35.6, E-value 1.2e-07" FT /inference="protein motif:Pfam:PF03551" FT CDS 1084223..1084843 FT /transl_table=11 FT /locus_tag="CBO0988" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR021359" FT /db_xref="UniProtKB/TrEMBL:A5I0H9" FT /protein_id="CAL82540.1" FT /translation="MRKFRLFTDYNKEEKWLNEMYKKGYELKNISFGYKFYSIEPENAT FT VRIDYRIFKNKEDFIDYCTLFEDSGWKHLAGNKNSGVQYFKEIHKNSQEDIFSDDISKA FT ARYKRLSNKSIISAVCFLSMSVAYISNGSININLILNPKLLYYTPGLWERTGEAFWGGL FT LFETPFALGRSAVFLIPIIAVFYAFLAIKARILYNKGKNLIKD" FT misc_feature order(1084562..1084630,1084727..1084795) FT /note="2 probable transmembrane helices predicted for FT CBO0988 by TMHMM2.0 at aa 114-136 and 169-191" FT /inference="protein motif:TMHMM:2.0" FT CDS 1084978..1085472 FT /transl_table=11 FT /locus_tag="CBO0989" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:A5I0I0" FT /protein_id="CAL82541.1" FT /translation="MKKRNNLIIVCLVVIIIAGSGILYKNYFTNIDSNNYLSSKNESEK FT SFFYYSSSGDSDKNAESFDFKRFNGKWSLMEFTSSKGNKINIKDNTKIAKGKLFIVVLD FT SECNIITKKDETKQKGDINFTTPKDGKYFIRIVGAKASGKFDISVNATKNIDISHIDFF FT S" FT sig_peptide 1084978..1085047 FT /locus_tag="CBO0989" FT /note="probabilty 0.953, with cleavage site probability FT 0.410 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT CDS 1085535..1085651 FT /transl_table=11 FT /locus_tag="CBO0990" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0I1" FT /protein_id="CAL82542.1" FT /translation="MTSVSLYKIKLAEVIGCIVLNLFANANRFKCKFNLYKY" FT repeat_region 1085797..1085830 FT repeat_region 1085877..1085914 FT repeat_region 1086002..1086051 FT CDS complement(1086105..1087112) FT /transl_table=11 FT /gene="add" FT /locus_tag="CBO0991" FT /product="adenosine deaminase" FT /EC_number="3.5.4.4" FT /db_xref="GOA:A5I0I2" FT /db_xref="InterPro:IPR001365" FT /db_xref="InterPro:IPR006330" FT /db_xref="UniProtKB/Swiss-Prot:A5I0I2" FT /protein_id="CAL82543.1" FT /translation="MNFKKLPKIELHCHLDGSLRIDTILDIAKKDNIPLPSYNKKELIN FT YVSIMDDCNSLDEYLNKFFIPNKVMQTKENLKRIAFELLEDVAADNVKYIEVRFAPLLH FT VEKGLNIEEIIESVLAGIKEAEKLYDIKGNLILGCMRNMDIPSAFEVVKKGAKFIGKGV FT VAIDLCAGEEPHFPGKYIEVLKLAKECGYRITIHAGEAGVGENVLEAINLLNAERIGHG FT IYIKNCAEAYKLVKEKNIPLEVCPTSNLHTKAFESYETHPFMDFLKDGIKVTINTDNMT FT VSNTTITKELEMLNKFCGLSIEDYKILYLNAVEASFASPETKEILKSYANEITA" FT misc_feature complement(1086126..1087112) FT /note="Pfam match to entry PF00962 FT A_deaminase,Adenosine/AMP deaminase, score 241.2, E-value FT 1.5e-69" FT /inference="protein motif:Pfam:PF00962" FT CDS 1088016..1090184 FT /transl_table=11 FT /locus_tag="CBO0992" FT /product="putative membrane protein" FT /note="This CDS is also similar to CBO0993 (37.812 identity FT in 722 aa overlap) and to CBO2927 (34.488 identity in 722 FT aa overlap)." FT /db_xref="InterPro:IPR017500" FT /db_xref="InterPro:IPR017501" FT /db_xref="UniProtKB/TrEMBL:A5I0I3" FT /protein_id="CAL82544.1" FT /translation="MNRFKNIIKVYKRDIKSLNKNFIAIIIILGVCVLPSLYAWVNIKA FT CWDPYENTSTVPIAVINNDKGTDFGGKELNVGNEMVKKLKSNDKIGWKFTNKKEADMGV FT IDGTYYASIEIPKDFSADIVSVLSDNPKHPEIIYKVDTKENPVAAKITGMAKNTLINEI FT TTTFITTVNKTVFSSINEIGRNLEKNKNEIIKLKESIISMNRNMDLILAGLESVNTNSK FT NLNEYLSVVRTTFPEITKGLENINSKSSNTNETINQTNNIFNNSLNNINVILKQAISTN FT NRVQSVLDNLIVLNNESSSNEANSSIANLIMDIDSANKNIDSMVEFLEKINNTKPNTEV FT SKFIVSLNNVKGALNEEKQKLLKIQEIASNSSKVNENSINELKRNISNTNKQIESVMNV FT FNSNTRQELSTIINNFKNSIQDASKLIKAGNGLNTQIENLLATSTKGADLSAKLSKELI FT DKLTEYKGIIGQLSKKLELVSNDDLIQIISVLQNNPMLMSQTAAYPFNIKEEAVYTIPN FT YGSAMTPVYSVLALWVGTLILVSLLKTEVVDFEGSENITIRQKYFGKMLTFITLAAMQG FT FIVAVGNKAILGVYTVSFPLMLAFSVVSSIVFAIITYTLVAIFGKFGNAIAIVFMILQL FT AGSGGTYPIQVDPLIFRILQPFFPFTYSIGGFREAIGGPLVSSVILDFIMLILMGGIFV FT LIGFFLKSPLHHKISKFDEDFKASGISE" FT sig_peptide 1088016..1088130 FT /locus_tag="CBO0992" FT /note="probabilty 0.997, with cleavage site probability FT 0.499 between residues 39 and 40" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1088076..1088144,1089573..1089641,1089699..1089758, FT 1089771..1089839,1089858..1089926,1090047..1090115) FT /note="6 probable transmembrane helices predicted for FT CBO0992 by TMHMM2.0 at aa 21-43, 520-542, 562-581,586-608, FT 615-637 and 678-700" FT /inference="protein motif:TMHMM:2.0" FT CDS 1090210..1092369 FT /transl_table=11 FT /locus_tag="CBO0993" FT /product="putative membrane protein" FT /note="This CDS is also similar to CBO0992 (37.812 identity FT in 722 aa overlap) and to CBO2927 (34.669 identity in 724 FT aa overlap)." FT /db_xref="InterPro:IPR017500" FT /db_xref="InterPro:IPR017501" FT /db_xref="UniProtKB/TrEMBL:A5I0I4" FT /protein_id="CAL82545.1" FT /translation="MKKVFRIFSRDLKNIVKHPAAIIVVLGLCFIPSLYAWINIEACWD FT PYANTGNLPIAIVNKDEGMMIRGKYTNVGNGIIESLKGNKKMGWVFVDEWQANYGLNEG FT KYYALIEIPSNFTSGLASLKTTDPQKPNIIYRVNEKSNAIATKITNAAKGSLAKEIQTN FT FVYTVNKEAFKLLNNTGGQLEKNKSKILGIKSTLELGNKSIGEVKNIIDDASKDSESLK FT QYFNDTKDKLPLITDQINNLQKATEASKNLVNETERDLNGIAKNINNDMIYRESTNSKI FT NSILTNLKEYNNVSNNSEMVKLVDEASKLCDSINSNIDGTIKSLEIVNILKPNKIIEEL FT INSLKNLQEKVNGEKNKLTELKNKISTSNNNKQNINQVVESILLLNDEINKNMKNTSNI FT FYNQTTMIIENTAKGLNNRLDTANDILDTTKLVIPQLKALGDFGVGTSDAALKDGKKIN FT NKLAEFKKTINKLEEKTSSLTEDNLDKIINLTQKNPEQMASFISSPINIKEEEIYNTGI FT FGVGLTPFYTVLAIWVGVLLMSSLISVEAEEFEGEKKLTHLQVYFGKLLLFLSIAIIQG FT IIVTLGDVFILGIKPASMGLLMVFTIVTAITFTFIIYTLVSIFGNLGKAIAVVIMVFQI FT AGAGGIYPIQTNPKIFGVLQPLWPFTYAIAGFREAIAGPVRAAVIKNLGALFIFSIGSL FT LLVVLKKPLHKVTEYMNDKFIETGL" FT sig_peptide 1090210..1090315 FT /locus_tag="CBO0993" FT /note="probabilty 0.940, with cleavage site probability FT 0.775 between residues 36 and 37" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1090270..1090323,1091773..1091841,1091902..1091970, FT 1091998..1092066,1092085..1092144,1092238..1092306) FT /note="6 probable transmembrane helices predicted for FT CBO0993 by TMHMM2.0 at aa 21-38, 522-544, 565-587,597-619, FT 626-645 and 677-699" FT /inference="protein motif:TMHMM:2.0" FT repeat_region complement(1092384..1092453) FT repeat_region 1092403..1092462 FT repeat_region 1092511..1092561 FT CDS complement(1092730..1093032) FT /transl_table=11 FT /locus_tag="CBO0993A" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0I5" FT /protein_id="CAL82546.1" FT /translation="MGKEPSVKSSANLLAIVSLIMSIIVILPILNWLFKITPWQKLEGL FT PLFFGLLISPFGFLLGILSIKIQSNKLGKIGVIINTLLFLLPFIYMTLGVLIFGP" FT CDS 1093223..1093978 FT /transl_table=11 FT /locus_tag="CBO0994" FT /product="putative membrane protein" FT /db_xref="GOA:A5I0I6" FT /db_xref="UniProtKB/TrEMBL:A5I0I6" FT /protein_id="CAL82547.1" FT /translation="MPFTFSHPAIVLPLEEKWNKYFNFTALILGSMSPDFEYFIRFKAM FT ATIGHGLIGFFLYNLPLCFILAYLFHRIIKKPLIAHGPKPIDSWYYNTALKPWRINSLA FT QVLVFSYSAIIGMITHVFWDSFTHKGGKFVILFEGLRKNIEILNYDIPVYKILQHGSTL FT LGVIFIILYIYSKRNKRINWKRINRIPATNNKEKISYFTTIFCTALIVLFVYISLLKVN FT FSIKNVGSFVVTFINGLFIGTIIASVKYR" FT misc_feature order(1093364..1093432,1093523..1093591,1093688..1093747, FT 1093808..1093876,1093904..1093972) FT /note="5 probable transmembrane helices predicted for FT CBO0994 by TMHMM2.0 at aa 48-70, 101-123, 156-175, 196-218 FT and 228-250" FT /inference="protein motif:TMHMM:2.0" FT CDS 1094222..1096351 FT /transl_table=11 FT /gene="recQ" FT /locus_tag="CBO0995" FT /product="ATP-dependent DNA helicase" FT /EC_number="3.6.1.-" FT /db_xref="GOA:A5I0I7" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR002121" FT /db_xref="InterPro:IPR004589" FT /db_xref="InterPro:IPR006293" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR018982" FT /db_xref="UniProtKB/TrEMBL:A5I0I7" FT /protein_id="CAL82548.1" FT /translation="MLEDAKNLLKKHFGYNEFRKAQEKVIESILKKEDTVAIMPTGAGK FT SICYQIPALIFEGVTVVISPLISLMKDQVDSLKEVGIEATYINSSLNNLEIEERIFNAR FT EGLYKLIYIAPERLESDSFVRSLNNLNIALVAVDEAHCVSQWGHDFRPSYTKISNFIRK FT LSKRPIVTAFTATATETVRRDILNSLELQNPKVFVTGFDRENLSFSVIKGEDKEKFIFG FT YLESNIGKVGIIYTSTRKEAESLYNKINKKGYKVGVYHAGLNDEERKKTQEDFSFDNIE FT IIVATNAFGMGIDKSNVRFVIHHNIPKNMEAYYQEAGRAGRDGEESECILLFSPNDIRL FT QKYFIDESFLSPERKNNEYNKLRAMVDYCYTSKCLRSYILEYFGEDALEEKCNNCSTCN FT DNREEKDITLEAQKIFSCVYRMKERFGVNMVADVLRGSKNKKLLSLDLDGLSTYGIMEE FT STQKDIVALMNKLIADDYMVTTDDKFPVVRLRQKSYDVLKGKEIVSIKVSKIEKKVKAD FT NELFEILKQLRKTISQEESVPPFMIFPDATLKELSEYMPTKEEDLLKIKGIGERKAKVY FT GERFIEAITEYMNEKGIDINNMDSYGSAKSNKESKIKTHVLSYNLYKEGKTIKEISEER FT NLKAITIQEHLFKCLSEGMEVDLDNFIKKDYEKLILDTIKKVGGTKLKPVKDELPPEVD FT YMCIKSVWYKYKDII" FT misc_feature 1094243..1094854 FT /note="Pfam match to entry PF00270 DEAD, DEAD/DEAH box FT helicase, score 136.4, E-value 5.4e-38" FT /inference="protein motif:Pfam:PF00270" FT misc_feature 1094963..1095193 FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 105.0, E-value 1.6e-28" FT /inference="protein motif:Pfam:PF00271" FT misc_feature 1095761..1096003 FT /note="Pfam match to entry PF00570 HRDC, HRDC domain,score FT 74.9, E-value 1.7e-19" FT /inference="protein motif:Pfam:PF00570" FT CDS 1096523..1096954 FT /transl_table=11 FT /locus_tag="CBO0996" FT /product="putative rubrerythrin" FT /db_xref="GOA:A5I0I8" FT /db_xref="InterPro:IPR003251" FT /db_xref="InterPro:IPR009040" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:A5I0I8" FT /protein_id="CAL82549.1" FT /translation="MDELDIINENQLGIAANNEKIKTDLEGQFRAETGEVGLYIAMARV FT AQRQGFPEIAEVLKVIATEEAEHAARYAELNGKVSDCTKENLQKMLQGEIGSNKMKKSL FT AVKAKEENIDEVHDFIDEASRDEARHAKMLKGLLDRYFG" FT misc_feature 1096583..1096945 FT /note="Pfam match to entry PF02915 FT Rubrerythrin,Rubrerythrin, score 106.8, E-value 4.3e-29" FT /inference="protein motif:Pfam:PF02915" FT repeat_region 1097046..1097231 FT /note="intergenic repeat 1" FT CDS complement(1097237..1097782) FT /transl_table=11 FT /locus_tag="CBO0997" FT /product="putative phosphoesterase" FT /db_xref="GOA:A5I0I9" FT /db_xref="InterPro:IPR000979" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:A5I0I9" FT /protein_id="CAL82550.1" FT /translation="MKLFFMSDIHGSAYYLEKALHIFEEEKADYLIILGDELYHGARNP FT LPKGYDPKKVTEILNSYKDKIIAVRGNCESEVDQMVLNYPIMSDYSIVLYNGKRLFLTH FT GHIFNKDNMPNISDGDALIYGHTHIPLAEKTNNIFVINPGSITFPKENTPHCYGILSDN FT LFKIKTLEGNTFKEISLI" FT misc_feature complement(1097393..1097782) FT /note="Pfam match to entry PF00149 FT Metallophos,Calcineurin-like phosphoesterase, score 68.6, FT E-value 1.4e-17" FT /inference="protein motif:Pfam:PF00149" FT CDS 1098419..1098802 FT /transl_table=11 FT /locus_tag="CBO0998" FT /product="two-component response regulator" FT /db_xref="GOA:A5I0J0" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:A5I0J0" FT /protein_id="CAL82551.1" FT /translation="MSSSQKNILVIDDSASIRSFVRNILEKANYKVYEACDGEEGIEVY FT KKCGNIDLVMTDIYMPKKSGLEVVVELQNKYKGTQIIVFSDGGKENFTNDSGVCEALGA FT AYFIRKDLIKDKLLDLVNIIFSK" FT misc_feature 1098434..1098799 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 62.2, E-value 1.1e-15" FT /inference="protein motif:Pfam:PF00072" FT CDS 1098917..1101391 FT /transl_table=11 FT /locus_tag="CBO0999" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0J1" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR021729" FT /db_xref="UniProtKB/TrEMBL:A5I0J1" FT /protein_id="CAL82552.1" FT /translation="MIERNLFNIINKYLPMGSQIIVEEDNNNEPLIIRANLNGYGLGEI FT IVAYRWQEENYIMVLERYCNQWSVIDNIRGKGYDISYLKVAPITDNAMDNLIIGWRRGA FT IWSELDILQWTPYGFKRVIDEGIYYSKIEVENMKSVKAMNDKNEIALWLHDTAEAYKVE FT IYRWSLGKLVKAEDVYPYYFKKVIDFYKTKLQEEPDLPVYWYYLADAQIKGEMYEDALK FT SIDKALELPKAYPSKKELIKLRDYILYYKKCKNINLYSAPMNTIKGVRWGYINEKGEFL FT IKPLYNLALEFQCNGLAVVEIDNLYGIIDENQNYIVKHKYGFISDFSEERAIVIDNERF FT NIINEEGEELIPKTENYSYIGNFKEGRAQYGVIDSNKGYLYGYLDREGRVIIPAQYEYG FT NDFYEGKAVVRIKENEYALVNIKGEILNKYEYASVGNLREGLLSFKKDMGEKYGFIDED FT GNVVIKPQFTYAHDFSEGRSVVNVSGNIMNNYGVIDKEGNYIITPKYNDIILLGENRVA FT VGVAIDKTSPFIGSKYAIADTEGNILTDFIYYEVSNYKNGIAFAYDDKNTFFIDKEGNK FT IENLPIVEGSGTLTVENELIKAYVDYKISYFDKEGNLIWEENSVISLNNQYKVIEEKYK FT PNKDYLVYYPKVQGMGDKDLEDEVNNRLKSLSEVKPIEENVQLEYSYLGDFKIEFFDNN FT LLELELDGYNFHFGAAHGIPSKIYTKIDLTTGEFYELKDLFKEDSDYVKVLSDIIGEQI FT KNNPEYSYIFPDSYNGIKEDQPFYVSEDTLYINFYPYEIAPYAAGFPTFKIPYKDIIDI FT INEAGAFWMSFN" FT misc_feature 1100519..1100569 FT /note="PS00283 Soybean trypsin inhibitor (Kunitz) protease FT inhibitors family signature." FT /inference="protein motif:ProSite:PS00283" FT CDS 1101838..1102053 FT /transl_table=11 FT /locus_tag="CBO1000" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR021375" FT /db_xref="UniProtKB/TrEMBL:A5I0J2" FT /protein_id="CAL82553.1" FT /translation="MTKQIKLRIYPDGIIQAEVEGVKGKKCTNYISIIENLLEAKVADS FT EYTPEYYEEEIVESYEEENITLKEGR" FT CDS 1102055..1102873 FT /transl_table=11 FT /locus_tag="CBO1001" FT /product="putative membrane protein (competence protein)" FT /db_xref="UniProtKB/TrEMBL:A5I0J3" FT /protein_id="CAL82554.1" FT /translation="MAATRKGSKWEIQKSLWILCSFVVLVNGMGMYFAGKKAKVKRWYN FT YGLIYTAIAWIGLIMGGELTGFVQSIGCIIFFLDYIVCIVHSFKIRKEYLIRCEVLEDK FT HVEQNEMNFMRSKIAKEYGIDNRNSNDKIKSNISQKDLMRERFNSNAEAKTESFHMKNK FT EENINNTPSSMPKVESTVNNTRYNLNNEELLDINSCNELELSRLPGMGLILAKKAVNLR FT NSKNGFDSVDEFIEMVGVKPHFVDTVKSMICCNPVKTVETVKMSGRRVDF" FT misc_feature order(1102097..1102156,1102181..1102240,1102250..1102318) FT /note="3 probable transmembrane helices predicted for FT CBO1001 by TMHMM2.0 at aa 15-34, 43-62 and 66-88" FT /inference="protein motif:TMHMM:2.0" FT CDS 1102873..1103466 FT /transl_table=11 FT /gene="nrdG" FT /locus_tag="CBO1002" FT /product="anaerobic ribonucleoside-triphosphate reductase FT activating protein" FT /EC_number="1.97.1.4" FT /db_xref="GOA:A5I0J4" FT /db_xref="InterPro:IPR012837" FT /db_xref="UniProtKB/TrEMBL:A5I0J4" FT /protein_id="CAL82555.1" FT /translation="MEIRIHRILPKTEVEGPGTRCCIWVQGCPIHCKGCGAKETWDFKG FT GELLDTNEVFDIIKNSKEIEGVTFLGGEPFVQASAVYDIALRAKSIGLTVLTFTGYTYD FT HILKSNKKEWNDLLSVTDLLIDGPFDEDKFDISRPWVGSSNQNYRFLTPSYKHLENNLT FT SIKNKIEVRLHKDGAIFLNGMGDFNSIKSKLKNL" FT misc_feature 1102936..1103463 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 14.0, E-value 0.025" FT /inference="protein motif:Pfam:PF04055" FT CDS 1103480..1105153 FT /transl_table=11 FT /locus_tag="CBO1003" FT /product="putative ATPase" FT /db_xref="GOA:A5I0J5" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="UniProtKB/TrEMBL:A5I0J5" FT /protein_id="CAL82556.1" FT /translation="MSIENSNNTERTKKYLGNMFKARFPYVYISTWEEERAISVISSVA FT KDASLIKTPRTTYIWSQTNGMALENLKGKEETKQPLKALEFIEKCEEPAVFILKDFHVF FT FGVQGKNIDYNLIRKVRDLVTVLKASPNPKSVVFISPTVILPNELQKDVTILDFDLPTI FT DEIKGMLDEMIYVNEQSGRIEMDLNESEKEKICKAALGLTLQEAENAFARAMVEDGKLN FT IDDIEVVLEEKCQVIKKTGILEFMKSDLKMEDVGGLENLKRWISKRNKSWLDSAQKYNL FT PAPKGVLITGVPGCGKSLTAKAISAMWQLPLLRLDMGKIFSGVVGSSEENMRKAIKTAE FT AVSPSILWIDEIEKGFGGASSSGDSGTSMRIFGTFLTWMQEKIKPVFVVATANNISNLP FT SELLRKGRFDEIFFVDLPTKNERKDIFRLHLKKRLTNEEVCEEISVTDELLSNLADITE FT GFVGAEIEQAVIAALFEAFSEDRALKVTDLERVIKNTVPLSVTQREQIIKIREWANVRA FT VAATAKEDRSEYLEVNEEKKDEKKGEDDIRISRGGRTIDF" FT misc_feature 1104335..1104913 FT /note="Pfam match to entry PF00004 AAA, ATPase family FT associated with various cellular activities (AAA), score FT 175.3, E-value 1e-49" FT /inference="protein motif:Pfam:PF00004" FT misc_feature 1104350..1104373 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1105168..1105938 FT /transl_table=11 FT /locus_tag="CBO1004" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0J6" FT /protein_id="CAL82557.1" FT /translation="MSISLALVPAVLTLKVVMNVKDLDNWVENSKINMPTTLKNEEEII FT KTLKQAGYKINKYGNLFKTEIKGENEFIIWKKKKGIWNVVFSKYDSKEMIVDFIMNLNN FT KAGRKVIYKSIEEMENRNDNSTTVEEILELPKVEKEIFPTNFRDKDLLLKTLKECGSYP FT KEISNEDIQCNTKECQLIFHKGEDGSYNVEIEDTSSLKNVYHHLSIIDEEYKHNVQEYT FT YKKVVEKLNGTDMYIDNEEVLEDNSILLTVNIGD" FT CDS 1106422..1107945 FT /transl_table=11 FT /gene="glcA" FT /locus_tag="CBO1005" FT /product="lactate permease" FT /db_xref="GOA:A5I0J7" FT /db_xref="InterPro:IPR003804" FT /db_xref="UniProtKB/TrEMBL:A5I0J7" FT /protein_id="CAL82558.1" FT /translation="MNMYLTCFIALVPIAWLMVSLGILKMPGYKTCPATLVLTVILAVI FT VWKMPILDAASAALEGMALALWPIILVIVAAVFTYNLSIHTKSMDTIKKMMTSITTDKR FT ILVLILAWGFGGFLEAIAGFGTAVAIPASIMAALGFDPIFAAIICLIANTTPTAFGGIG FT IPVTTLAKVTNIDVIQLSYAVGLQLSVLIVIIPIVLVMLTGKSVKSIKGVFGIALASGL FT SFAIPELLMAKYMGAELPAILGSITCMVVTIAMAKIFYKDTASKNVEKIPFKKAVIAWL FT PFILVFVFIILTSPLFPAINKGLSQIQTTLYIYTGAHAKPFTFLWLATPGTLIIIATFI FT GGLIQGAKFSEIVSVLVKTIKQMSKSAITIIAIVAMAKIMGYSGMIKSIAVVLVAVTGS FT YYPLISPIIGALGTFVTGSDTSSNVLFGGLQVEVAKTLGLNPYWLAAANTGGATAGKMI FT SPQSIAVATAATGLVGAEGKILNATIKFCIVYVIVLGIMAYFMAPVFGF" FT sig_peptide 1106422..1106506 FT /gene="glcA" FT /locus_tag="CBO1005" FT /note="probabilty 0.686, with cleavage site probability FT 0.508 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1106434..1107924 FT /note="Pfam match to entry PF02652 Lactate_perm, L-lactate FT permease, score 554.5, E-value 7.3e-164" FT /inference="protein motif:Pfam:PF02652" FT misc_feature order(1106434..1106493,1106527..1106595,1106605..1106673, FT 1106734..1106802,1106845..1106913,1106950..1107018, FT 1107121..1107189,1107250..1107318,1107385..1107453, FT 1107511..1107579,1107589..1107657,1107877..1107936) FT /note="12 probable transmembrane helices predicted for FT CBO1005 by TMHMM2.0 at aa 5-24, 36-58, 62-84, FT 105-127,142-164, 177-199, 234-256, 277-299, 322-344, FT 364-386,390-412 and 486-505" FT /inference="protein motif:TMHMM:2.0" FT CDS 1107974..1109248 FT /transl_table=11 FT /locus_tag="CBO1006" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR018657" FT /db_xref="UniProtKB/TrEMBL:A5I0J8" FT /protein_id="CAL82559.1" FT /translation="MAKIKIPYHKKMIEIGIEDKNLVGILESKADEYKRNLSQEEIVEA FT ALDNPIQCEKLEDLVKGKKNMVIITSDHTRPVPSKITMPILLRRIREVNPDIDIKILIA FT TGFHRESTKEELINKFGEEIVENENIVMHVSTDDSTLVKVGTLPSGGDLILNKLAMETE FT LLIAEGFIESHFFAGFSGGRKSILPGIASAKTIMANHCGEFIASPNARTGILKDNPVHK FT DMIYAAEKASLAFILNVVIDSEKKVINAFAGHRQYAHETGCKFVLELSKVEKVKADIVV FT SSNGGYPLDQNIYQSVKGMTAAESTCKEGGVIIMVAACNDGHGGQSFYDNLANSKSPRE FT LLDRIAKVPRCETVPDQWEFQILARMLDKFTVILVTDMCDPNMIKAMHMEHAYNFEEAL FT NRAYKLKGKDAKVAVIPDGVSVIVG" FT CDS 1109291..1110079 FT /transl_table=11 FT /gene="etfB" FT /locus_tag="CBO1007" FT /product="electron transfer flavoprotein beta-subunit" FT /db_xref="GOA:A5I0J9" FT /db_xref="InterPro:IPR012255" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR014730" FT /db_xref="UniProtKB/TrEMBL:A5I0J9" FT /protein_id="CAL82560.1" FT /translation="MDILVCIKQVPGTSKVEVDPVTGVLKRDGVDSKMNPYDLYALETA FT LRLKEKFGGVVKVISMGPPQAAEVIKEAYMMGADEGVLLSDRKFAGADVLSTAYTISQG FT VREMGKFDLILCGKQTTDGDTAQVGPEMAEYLDIAHIANVIKIEEVKNDSVVVEMDMPN FT TIEVAEIKYPCLLTVEKDICEPRLPSYRKKLETKDKEVKMLSLKDFEDKNENMYGLNGS FT PTQVERIFPPAVNTDKEMWTGSGEELGNKLTAKLKELKFV" FT misc_feature 1109291..1110046 FT /note="Pfam match to entry PF01012 ETF_beta, Electron FT transfer flavoprotein beta subunit, score 279.0, E-value FT 6.3e-81" FT /inference="protein motif:Pfam:PF01012" FT CDS 1110111..1111313 FT /transl_table=11 FT /gene="etfB" FT /locus_tag="CBO1008" FT /product="electron transfer flavoprotein alpha-subunit" FT /db_xref="GOA:A5I0K0" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR014730" FT /db_xref="InterPro:IPR014731" FT /db_xref="InterPro:IPR017896" FT /db_xref="UniProtKB/TrEMBL:A5I0K0" FT /protein_id="CAL82561.1" FT /translation="MGKLVVNEEKLTPSIIGELVKICPFGALGENSGKIEISAACKMCK FT LCVKTGPAGVMEFVEEEKSHIDKSLWKGIAVYVDHVDGDIHPVTYELIGKARELANKIN FT HPVYAVFIGHDIKEKAEEILHYGVDEVFVYDNEELKDFRIEPYTKAMEDFISKNKPSAL FT LVGATTIGRSLAPRVAARFRTGLTADCTILDIKENTDLVQIRPAFGGNIMAQIINPNNR FT PQLATVRYKVMDAPERSEEKSGKVTLCSIDKSQLDSQIKVLKVTKKQVEESISDADIII FT AVGRGLKKEKDLDMINELAELIGAQIATTRPLIEAGWTDAKRQIGLSGRTVKPKLIITC FT GISGAVQFTAGMNNAECIVAINKDPKASIFNVAHYGIIGDIYEVIPTLINNIKEGKGLT FT V" FT misc_feature 1110327..1111178 FT /note="Pfam match to entry PF00766 ETF_alpha, Electron FT transfer flavoprotein alpha subunit, score 323.6, E-value FT 2.5e-94" FT /inference="protein motif:Pfam:PF00766" FT CDS 1111374..1112771 FT /transl_table=11 FT /gene="glcD" FT /gene_synonym="gox" FT /locus_tag="CBO1009" FT /product="glycolate oxidase subunit" FT /db_xref="GOA:A5I0K1" FT /db_xref="InterPro:IPR004113" FT /db_xref="InterPro:IPR006094" FT /db_xref="InterPro:IPR016164" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR016168" FT /db_xref="InterPro:IPR016171" FT /db_xref="UniProtKB/TrEMBL:A5I0K1" FT /protein_id="CAL82562.1" FT /translation="MEYKKLDVKDIEFLKSIAGQERVYTGEDINEDYSHDELGGISKMP FT DAMVEVLSTEEVSKIMAYAYKNNIPVVARGSGTGLVGASVPIHGGIMINMTKMNRILEI FT DEENLTLTVEPGVLLMEIGKFVEEHDLFYPPDPGEKSATIGGNISTNAGGMRAVKYGVT FT RDYIRGLEIVLPDGKVIQVGGKVVKNSSGYSIKDLVCGAEGTLAIVTKAILKLLPLPKK FT AISLLIPFPNLEMAINTVPKIIKSKAIPTAIEFMQREVILAAEKFLGKKFPDNSSDAYL FT LLTFDGNTKEDIEKDYEKVADICLEEGALDVYISDTDERKEAVWSARGAFLEAVKASTT FT EMDECDVVVPRNKVASFVKYTDELQEQFDVRIRSFGHAGDGNLHVYVLRDNLNKEQWDK FT KLKDVFECMYKKSVELNGLVSGEHGIGFAKKPYLFEQYGEEYMELMKNIKLAFDPKNIL FT NPGKVCQ" FT misc_feature 1111506..1111988 FT /note="Pfam match to entry PF01565 FAD_binding_4, FAD FT binding domain, score 244.0, E-value 2.2e-70" FT /inference="protein motif:Pfam:PF01565" FT misc_feature 1112028..1112762 FT /note="Pfam match to entry PF02913 FAD-oxidase_C, FAD FT linked oxidases, C-terminal domain, score 272.0, E-value FT 8.4e-79" FT /inference="protein motif:Pfam:PF02913" FT CDS 1113040..1113162 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO1010" FT /product="hypothetical protein (gene fragment)" FT /note="Partial CDS. Similar to the N-terminal regions of FT several including Listeria innocua hypothetical protein FT Lin0801 lin0801 SWALL:Q92DL2 (EMBL:AL596166) (240 aa) fasta FT scores: E(): 0.00017, 43.59 38d in 39 aa, and to FT Clostridium perfringens two-component response regulator FT cpe0518 SWALL:Q8XN20 (EMBL:AP003187) (238 aa) fasta scores: FT E(): 8.3, 37.5 38d in 40 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82563.1" FT CDS 1113290..1114198 FT /transl_table=11 FT /locus_tag="CBO1011" FT /product="putative lipoprotein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0K3" FT /protein_id="CAL82564.1" FT /translation="MLMRKLVNLLLIGIIGMLLGACSTNRTLNDFKNGKDKDTLQIPIV FT HDVYNYNGKPNADVLSIFNSNGDVRISKSETNDLKVKTKLVQTKSIKDIDKKLNNLAIK FT PKIEKGVIFYEPLYTNNKNQNYWEWIKSSLNANGIQVNFDVQIPQTIKEVRIYSELGNI FT NLQNISAKIHAQTNIGTITSANINPLDSAVFKANIPSRGENALDISLSSIDNVSSITAG FT VTSGNIVFNLPSGSEYIYNQMDPKQMPVTYPYDMYSKEQFEYCKEHSLEIFKPIEIKQG FT KTVIKTVTNKESFRKISIRQQ" FT sig_peptide 1113290..1113374 FT /locus_tag="CBO1011" FT /note="probabilty 0.980, with cleavage site probability FT 0.353 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1113308..1113361 FT /note="1 probable transmembrane helix predicted for CBO1011 FT by TMHMM2.0 at aa 7-24" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1113323..1113355 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1114394..1114864 FT /transl_table=11 FT /locus_tag="CBO1012" FT /product="MarR-family transcriptional regulator" FT /db_xref="GOA:A5I0K4" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0K4" FT /protein_id="CAL82565.1" FT /translation="MFEVDNINSIVEGFKEIYEKEEILGKIAFRGEYEKYGVSEIHCID FT FIGKIENPNVTKISENMNMTRGAISKICKKLLNNKLIDKYKKPENDKEIYFKLTKSGEE FT LYKCHEIKHKKWEERNNNFFKNVDREEQEIVVSFLKKFNNFLDKIIESEGDV" FT misc_feature 1114499..1114819 FT /note="Pfam match to entry PF01047 MarR, MarR family,score FT 67.9, E-value 2.2e-17" FT /inference="protein motif:Pfam:PF01047" FT misc_feature 1114550..1114615 FT /note="Predicted helix-turn-helix motif with score FT 1293.000, SD 3.59 at aa 53-74, sequence FT PNVTKISENMNMTRGAISKICK" FT CDS 1114866..1115411 FT /transl_table=11 FT /locus_tag="CBO1013" FT /product="putative cyclase" FT /db_xref="InterPro:IPR007325" FT /db_xref="UniProtKB/TrEMBL:A5I0K5" FT /protein_id="CAL82566.1" FT /translation="MNLHLKEFNIPEKILKWGDSQPAHQRQHIGTHIDCYNLSKIELPS FT EMDVKVIDVRNLDIIDIDILDNISIKEDSFVIFRTGYLENYGYGSEEYFNSKSSPYLTN FT ELVDKLLNFNVKLIGIDLSGIQHGKHHVAIDKYVENKGAYVVENICNLDKIDSEFKADL FT KWFQLEGATAIKVQIETL" FT misc_feature 1114911..1115375 FT /note="Pfam match to entry PF04199 Cyclase, Putative FT cyclase, score -18.3, E-value 0.00044" FT /inference="protein motif:Pfam:PF04199" FT CDS complement(1115712..1116896) FT /transl_table=11 FT /locus_tag="CBO1014" FT /product="putative aromatic amino acid aminotransferase" FT /db_xref="GOA:A5I0K6" FT /db_xref="InterPro:IPR001176" FT /db_xref="InterPro:IPR004838" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5I0K6" FT /protein_id="CAL82567.1" FT /translation="MISNEMLNLGKKRSIIRDIFEYGATRKKEIGAENVYDFSLGNPSI FT PAPDCVNEAIKELLEKEDSIRLHSYTSAQGDLSVRKTISDSINNKYSTNLSPDNIYMTV FT GAAASLSISLKALAVPGDEFIVFTPFFPEYRVFIQNAGGTPVVVKSNEDNFQIDINNLI FT EAITPKTKAVLINSPNNPSGVIISEESIKSLCKVLEEKSDEYGHPIYLIADEPYRELVY FT DDIEVPYLTKYYANTFVCYSFSKSLSLPGERIGYIVVSNEMENWQDVYAAVCGAGRSLG FT YVCAPSLFQRVIAKCIGQTADISVYKKNRDILYNGLTKLGYTCVKPDGAFYLFVKSMEP FT DAYAFYEKAKKHELLIVPADDFGAPGYVRISYCVTTEQIENSMPAFEKLAKEYK" FT misc_feature complement(1115727..1116629) FT /note="Pfam match to entry PF00155 FT aminotran_1_2,Aminotransferase class I and II, score 108.8, FT E-value 1.1e-29" FT /inference="protein motif:Pfam:PF00155" FT misc_feature complement(1116132..1116173) FT /note="PS00105 Aminotransferases class-I FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00105" FT CDS complement(1117825..1118403) FT /transl_table=11 FT /locus_tag="CBO1015" FT /product="putative cyclase" FT /db_xref="InterPro:IPR007325" FT /db_xref="UniProtKB/TrEMBL:A5I0K7" FT /protein_id="CAL82568.1" FT /translation="MKIDLTLEIGKKLLSSTLKKAINEDKAFGSIGHLGTHFDVMDKEF FT PLDYIKTRGKIFNVCHIRNNEISLNDINLNEIEENDFILFYTGYLKETGYGTGEYLKDH FT PELSRELIDYLINKKISMIGIDTTGIKKSSEHRHIDQYCADRNVFIIENMNNLDLLWAE FT AKNNSFTMYTFPLNIKGVTGLTSRVIAEL" FT misc_feature complement(1117870..1118400) FT /note="Pfam match to entry PF04199 Cyclase, Putative FT cyclase, score 23.9, E-value 7.3e-07" FT /inference="protein motif:Pfam:PF04199" FT CDS 1118562..1119086 FT /transl_table=11 FT /locus_tag="CBO1016" FT /product="MarR-family transcriptional regulator" FT /db_xref="GOA:A5I0K8" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0K8" FT /protein_id="CAL82569.1" FT /translation="MIIEEQDNKSVKLFEKVISFINHLSEIDKNQEKNLIESILNIKEG FT KEWGDKELNKITDNDIKGISLSEFHVIECIGKNNMSNNIFIAKELNMTKGGISKINSKL FT LSKDIIKADKIENDKREIYYSLTEKGIALFKLHEHLHEKEREKLMKILSNYKLEEITTI FT LKFLEDLEKVI" FT misc_feature 1118751..1119071 FT /note="Pfam match to entry PF01047 MarR, MarR family,score FT 69.5, E-value 7.6e-18" FT /inference="protein motif:Pfam:PF01047" FT CDS 1119389..1120210 FT /transl_table=11 FT /locus_tag="CBO1017" FT /product="MerR-family transcriptional regulator" FT /db_xref="GOA:A5I0K9" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="InterPro:IPR010499" FT /db_xref="InterPro:IPR011256" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:A5I0K9" FT /protein_id="CAL82570.1" FT /translation="MKDLFTIGEISKLFNINIRTLRYYDEIDLFKPIFIDKANSYRYYS FT TDQFEQLNTIKYLKALGMSLDTISYHLKKRSVDNIIELFEKQKKITEEKIKELELTKQK FT IQNRINQINYARQYHNLDVVQEIRLQERRIVLLKEKIKSNNDLELSIRHLENKANKNAS FT IFNGKIGVSISIDKLKNKEFGEYDSIFLFTEGERYNKNLIKVLPEGTYASIRFTGTHKN FT SPIYYDELLKYIEEKGYTIIDDSIEITLIDFGLTTEKSEFVTEIQILINKS" FT misc_feature 1119401..1119466 FT /note="Predicted helix-turn-helix motif with score FT 1442.000, SD 4.10 at aa 5-26, sequence FT FTIGEISKLFNINIRTLRYYDE" FT misc_feature 1119404..1119520 FT /note="Pfam match to entry PF00376 merR, MerR family FT regulatory protein, score 50.6, E-value 3.7e-12" FT /inference="protein motif:Pfam:PF00376" FT misc_feature 1119466..1119542 FT /note="Predicted helix-turn-helix motif with score FT 1442.000, SD 4.10 at aa 52-26, sequence FT EIDLFKPIFIDKANSYRYYSTDQFEQL" FT misc_feature 1119542..1119607 FT /note="Predicted helix-turn-helix motif with score FT 1265.000, SD 3.50 at aa 52-73, sequence FT LNTIKYLKALGMSLDTISYHLK" FT CDS 1120425..1121123 FT /transl_table=11 FT /locus_tag="CBO1018" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0L0" FT /db_xref="InterPro:IPR005146" FT /db_xref="InterPro:IPR020825" FT /db_xref="UniProtKB/TrEMBL:A5I0L0" FT /protein_id="CAL82571.1" FT /translation="MKFIVAKEVFENLDNVCFGIVVAKGINNKENIEATQLLKDSIELI FT ETKFKDKNVKEVEDMVYYREAFLKLGINPNKFKSSIEAITTRVAKKKGFPNINPVVDIG FT NAVSLKYLVPLGAHDIDSAEEDICLRFSKEGDTFLPFGENELELLGEDELIYSVGNKVK FT TRRWIWRQSEQGKITEESKNIFFPIDGFKDKNYDNVINARDELAEILKKNFNCEIKVGF FT VDINNTEFEF" FT misc_feature 1120701..1120862 FT /note="Pfam match to entry PF03483 B3_4, B3/4 domain,score FT 29.9, E-value 6.4e-08" FT /inference="protein motif:Pfam:PF03483" FT CDS complement(1121388..1122677) FT /transl_table=11 FT /gene="aspS" FT /locus_tag="CBO1019" FT /product="aspartyl-tRNA synthetase" FT /EC_number="6.1.1.12" FT /db_xref="GOA:A5I0L1" FT /db_xref="InterPro:IPR002312" FT /db_xref="InterPro:IPR004364" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004523" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018150" FT /db_xref="UniProtKB/TrEMBL:A5I0L1" FT /protein_id="CAL82572.1" FT /translation="MKRTLISELKNFMNEKINLQGWIHKIRKLRNITFLIIRDRSGLIQ FT CIVDNDKLDLSQVKIESIVSLTGVVKESTNALNPFEIQVENLEIINAALDKLPIEINKE FT NLEINLDTMLNNRILSLRHPKVNSIFKVQNSIVNGFREFLNKEGFTEIYTPKIVWEGAE FT GGTEVFKVKYFENTAYLAQSPQFYKQMMVGAGFERVFEIGHAYRAEEHNTNRHLNEYIS FT MDLEIGFIEDEKDIMEVEERLLKFILEKLNKECKEYFDLLDSELPKIESEIPKITFKEA FT LDILIKEYNKNNLTCDLDPEGEKLICKYAKEKLDSDFIFLTNYPREKRPMYTMPLGKDG FT THSFDLLFRGIEITTGGQRIHDYNMLVDNMEFKGFNPKDYESYLSAFKYGMPKHGGLAI FT GLERLTSRLLGLENVREAALITRDRTRLLP" FT misc_feature complement(1121403..1122353) FT /note="Pfam match to entry PF00152 tRNA-synt_2, tRNA FT synthetases class II (D, K and N), score 261.8, E-value FT 9.8e-76" FT /inference="protein motif:Pfam:PF00152" FT misc_feature complement(1122408..1122629) FT /note="Pfam match to entry PF01336 tRNA_anti, OB-fold FT nucleic acid binding domain, score 65.8, E-value 9.7e-17" FT /inference="protein motif:Pfam:PF01336" FT misc_binding complement(1122691..1123051) FT /gene="aspS" FT /locus_tag="CBO1019" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 1123222..1123602 FT /transl_table=11 FT /locus_tag="CBO1020" FT /product="putative exported protein" FT /db_xref="GOA:A5I0L2" FT /db_xref="InterPro:IPR008254" FT /db_xref="UniProtKB/TrEMBL:A5I0L2" FT /protein_id="CAL82573.1" FT /translation="MKKGFKIMKRIFLSFIVLLILVMLLFSWFIKGNSKDYGENSKVLK FT SDKVSNKKALVVYQPSKSKLTEKIAEQIAQGIQDEGYEVTINYPGKHMIEDISQYSIIV FT FGSPVYVGETSSTLADYMKSIG" FT sig_peptide 1123222..1123315 FT /locus_tag="CBO1020" FT /note="probabilty 1.000, with cleavage site probability FT 0.582 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT CDS 1123762..1124376 FT /transl_table=11 FT /locus_tag="CBO1021" FT /product="TetR-family family transcriptional regulator" FT /db_xref="GOA:A5I0L3" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023773" FT /db_xref="UniProtKB/TrEMBL:A5I0L3" FT /protein_id="CAL82574.1" FT /translation="MGITERRKLEKEIIRKKIIDTANQILVEEGYENLSIRKIANKIEY FT SPGIIYHYFKDKSEIVTFVVEQGYGRILKSINEVPVDTENPEKTIEQGLRKYIELMLQY FT PEQFRTVLMNDIKSIQEKVNMLHEGVSKDRKSIQQLCRLVELGIQKGKFRDMDIELTAQ FT IIWTSTHGLLSRLILEKNISKQQRERLIDHHFQILISGLLK" FT misc_feature 1123813..1123953 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 50.0, E-value FT 5.5e-12" FT /inference="protein motif:Pfam:PF00440" FT misc_feature 1123861..1123926 FT /note="Predicted helix-turn-helix motif with score FT 1565.000, SD 4.52 at aa 50-71, sequence FT LSIRKIANKIEYSPGIIYHYFK" FT CDS 1124392..1124880 FT /transl_table=11 FT /locus_tag="CBO1022" FT /product="putative flavodoxin" FT /db_xref="UniProtKB/TrEMBL:A5I0L4" FT /protein_id="CAL82575.1" FT /translation="MKTLIVYGTKHGTTEKCSKFLKDKLSGEVVIINIKKENMPDITTF FT NNIIIGGSIYMGQIQKEVKNFCIENINVLKEKRVGIFICGLNEKDIEAQLNNAFPKELL FT TNAVAKECFGGECILKNMNFFERFIMKKVSKIDKDTSKISEENINKFTQLINDNYSSR" FT CDS complement(1124987..1125676) FT /transl_table=11 FT /locus_tag="CBO1023" FT /product="putative hydrolase" FT /db_xref="GOA:A5I0L5" FT /db_xref="InterPro:IPR005833" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006439" FT /db_xref="InterPro:IPR006549" FT /db_xref="InterPro:IPR011951" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:A5I0L5" FT /protein_id="CAL82576.1" FT /translation="MKYKIIIFDADETLFDFKKSERDAFKNAMLEFNIKYDENYHLKAY FT KDINTIIWKELENGLITQEELKIERFKRLSHKLNIKFNEYDFAKSYMKHLSHASFLYDD FT SINLVESLHKNYRLSIVTNGLKDVQNNRIRKSIIAKYFEDIVISEEVKVSKPSSKIFEH FT ALNNMNHTDKRNVLMVGDSLTSDIQGGINFGIDTCWFNSNKIINKTEIKPTYEISNIME FT LKDMLEK" FT misc_feature complement(1125068..1125670) FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 87.8, E-value 2.3e-23" FT /inference="protein motif:Pfam:PF00702" FT CDS 1125987..1126676 FT /transl_table=11 FT /locus_tag="CBO1024" FT /product="cyclic nucleotide-binding regulatory protein" FT /db_xref="GOA:A5I0L6" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012318" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:A5I0L6" FT /protein_id="CAL82577.1" FT /translation="MKKILNKELLNNYIDKHNIESIFDKDILKYAQLHFYEKEEYILKA FT ESNLEYYYLIVDGKIKISYPFENGKPMLLKFYKDFNTIGDLEFLKNIPILCDVDAVGDT FT YLIAIPSDILRKKYLDNVKFLHHLIDSLSEKLYATINNSSYNFVYPLINRLSSYLVEHI FT EDKNYIILNSSFLEIAQFLGTTYRHLNRTFKELESKSIIKCENKTIYILDENRLRALSK FT NFYIKSL" FT misc_feature 1126074..1126355 FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 32.4, E-value 1.1e-06" FT /inference="protein motif:Pfam:PF00027" FT misc_feature 1126503..1126568 FT /note="Predicted helix-turn-helix motif with score FT 1162.000, SD 3.14 at aa 173-194, sequence FT SSFLEIAQFLGTTYRHLNRTFK" FT CDS complement(1126794..1127378) FT /transl_table=11 FT /locus_tag="CBO1025" FT /product="putative protease I" FT /db_xref="GOA:A5I0L7" FT /db_xref="InterPro:IPR002818" FT /db_xref="UniProtKB/TrEMBL:A5I0L7" FT /protein_id="CAL82578.1" FT /translation="MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREK FT LKCTFNFTVTPEMHVSEVNIDEFDALAIPGGFEEAGFYEDAYSEDFLNIIREFDKARKT FT IASICVGALPIGKSGVLVNRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNIITSY FT NPSTAFHVAFKLLELLTSKENCVNVKRLMGF" FT misc_feature complement(1126839..1127279) FT /note="Pfam match to entry PF01965 DJ-1_PfpI, DJ-1/PfpI FT family, score 74.1, E-value 3.1e-19" FT /inference="protein motif:Pfam:PF01965" FT misc_feature complement(1127025..1127048) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1127534..1128427 FT /transl_table=11 FT /locus_tag="CBO1026" FT /product="LysR-family transcriptional regulator" FT /db_xref="GOA:A5I0L8" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0L8" FT /protein_id="CAL82579.1" FT /translation="MEIRHLQTFITIVELEGFTKAAEYLGYAQSTITSHIQILENELGE FT VLFDRLGKKIVLTNVGQKLVPYAKQMLHVYKEIKNITSEEKDVYGDLIIGAGESLSIYR FT LGKILKEYKKKFPKVNIILKNSICSDLRSKLHSGELDIIFTIEPEIIDKDLIVKNLKNE FT NMVIIGAPDADLEFLSTNYKGGMARESIIFSEKGCSFRIAFEKYLKQKKIKYVNPLEFS FT SIEAAKKCVMNGLGISLLPFYAVKNEIKEGTLKTIELKEPFDKFRTQLAYHKNKSISLP FT MSKLIEITLKNSANWK" FT misc_feature 1127540..1127719 FT /note="Pfam match to entry PF00126 HTH_1, Bacterial FT regulatory helix-turn-helix protein, lysR family, score FT 77.4, E-value 3.2e-20" FT /inference="protein motif:Pfam:PF00126" FT misc_feature 1127579..1127644 FT /note="Predicted helix-turn-helix motif with score FT 1544.000, SD 4.45 at aa 16-37, sequence FT EGFTKAAEYLGYAQSTITSHIQ" FT misc_feature 1127582..1127674 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 1127786..1128415 FT /note="Pfam match to entry PF03466 LysR_substrate, LysR FT substrate binding domain, score 113.0, E-value 5.8e-31" FT /inference="protein motif:Pfam:PF03466" FT CDS 1128561..1129319 FT /transl_table=11 FT /locus_tag="CBO1027" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0L9" FT /protein_id="CAL82580.1" FT /translation="MEIIKITEDNIDKEHICCVITEKKGESCIKSKKDWLKERLKDGLI FT FKKLNVRGKVFIEYIPAEKAWYPFNANGYMVINCFWVSGRYKGKGISNLLLNECIKDSK FT LQGKKGIVVLSSKKKIPYLSDGNHLKYKGFKVADTLDSQYELLYLPFKEDEKVPTIKSC FT AKECEILGKGLKLYYSNQCPYTDKYVKIIKKIADSRGLNLEINKYENAKQAQNAPSPFT FT TYSFFFNGNFVTNEILTEKKFIKFLDENNL" FT repeat_region complement(1129317..1129501) FT /note="intergenic repeat 1" FT CDS 1129864..1130082 FT /transl_table=11 FT /locus_tag="CBO1028" FT /product="putative ferrous iron transport protein" FT /db_xref="GOA:A5I0M0" FT /db_xref="InterPro:IPR007167" FT /db_xref="UniProtKB/TrEMBL:A5I0M0" FT /protein_id="CAL82581.1" FT /translation="MSVMTLSMAREGEINQIKKITGRDNIRQFLAKLGFVEGESVTVIS FT EISGNMIINVKDSRIAIGKSMANRIII" FT misc_feature 1129873..1130079 FT /note="Pfam match to entry PF04023 FeoA, FeoA family,score FT 36.2, E-value 7.8e-08" FT /inference="protein motif:Pfam:PF04023" FT CDS 1130099..1130320 FT /transl_table=11 FT /gene="feoA" FT /locus_tag="CBO1029" FT /product="putative ferrous iron transport protein A" FT /db_xref="GOA:A5I0M1" FT /db_xref="InterPro:IPR007167" FT /db_xref="UniProtKB/TrEMBL:A5I0M1" FT /protein_id="CAL82582.1" FT /translation="MMTLKDVECGQKVTVVKLHGKGVVKRRIMDMGITKGVEIFVRKLA FT PLGDPIEVNIRNYELTLRKADAEMIEVK" FT misc_feature 1130102..1130317 FT /note="Pfam match to entry PF04023 FeoA, FeoA family,score FT 71.3, E-value 2.1e-18" FT /inference="protein motif:Pfam:PF04023" FT CDS 1130352..1132508 FT /transl_table=11 FT /gene="feoB" FT /locus_tag="CBO1030" FT /product="ferrous iron transport protein B" FT /db_xref="GOA:A5I0M2" FT /db_xref="InterPro:IPR003373" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR011619" FT /db_xref="InterPro:IPR011640" FT /db_xref="InterPro:IPR011642" FT /db_xref="UniProtKB/TrEMBL:A5I0M2" FT /protein_id="CAL82583.1" FT /translation="MENIRIALVGNPNCGKTTMFNYLTGSSQYVGNWPGVTVEKKEGKL FT KQHKDVKVIDLPGIYSLSPYTLEEVITRNYLITEKPEVIINIVDGTNLERNLYLSTQVM FT ELGIPVIIALNMMDIVRKNGDIIDKDKLSKSMGCTVVETSALKGDGCKELIDKAIELAK FT SHKNNVIEHTFSNDVEKVLSDIENEIYNQVQKEHLRWFAIKLFENDEKAIEQGNISKAS FT KDKVKAIVSSCEDELDDDGESIITNERYNYISKIISKCVVKKNKSKLTTSDKIDKIVTN FT RVLGLPIFAAVMFLVYYLSISTIGTGATDWVNDVLFGDIIPPAVEGFLTSIGTAAWLNS FT LILDGIIAGVGAVLGFLPQMMVLFLCLSILEDCGYMSRIAFIMDRIFRKFGLSGKSFIP FT MLIGTGCGVPGIMASRTIENESDRKMTIITTTFMPCSAKLPIIALIAGALFPGSVWIAP FT SAYFIGIAAIICSGIILKKTKAFAGEPAPFVMELPKYHVPGVKGVLIHMWDRAKSFVKK FT AGTIIFLACGLIWFLSTFNWSLAMVETPDSMLASMGKVIAPIFKPLGWGDWKSAVATIT FT GLIAKENVVGTFGILYGAGEVAEDGVEIWKTLQGSFTQLSAYSFLVFNLLCAPCFAAIG FT AIKREMGNAKWTWLAVGYQTGLAYAVALVVYQLGSLFTGKGFGIGTLVALVLLVGFLYM FT LFRPYKDLTSSTNHKSNKVENISV" FT misc_feature 1130373..1132358 FT /note="Pfam match to entry PF02421 FeoB, Ferrous iron FT transport protein B, score 872.2, E-value 1.7e-259" FT /inference="protein motif:Pfam:PF02421" FT misc_feature 1130379..1130402 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature order(1131198..1131266,1131309..1131377,1131396..1131464, FT 1131540..1131593,1131630..1131698,1131708..1131776, FT 1131909..1131977,1132194..1132262,1132299..1132367, FT 1132380..1132439) FT /note="10 probable transmembrane helices predicted for FT CBO1030 by TMHMM2.0 at aa 283-305, 320-342, FT 349-371,397-414, 427-449, 453-475, 520-542, 615-637, FT 650-672 and 677-696" FT /inference="protein motif:TMHMM:2.0" FT CDS 1132529..1132675 FT /transl_table=11 FT /locus_tag="CBO1031" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0M3" FT /protein_id="CAL82584.1" FT /translation="MATFIIGTLVIGSFVVVGHKVYKDKKNGNCCSGNCCDCHSSCKST FT KSK" FT misc_feature 1132538..1132594 FT /note="1 probable transmembrane helix predicted for CBO1031 FT by TMHMM2.0 at aa 4-22" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1132631..1132654 FT /note="PS00118 Phospholipase A2 histidine active site." FT /inference="protein motif:ProSite:PS00118" FT CDS complement(1133070..1133507) FT /transl_table=11 FT /locus_tag="CBO1032" FT /product="probable acetyltransferase" FT /db_xref="GOA:A5I0M4" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR013653" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0M4" FT /protein_id="CAL82585.1" FT /translation="MNFKEITISDIKEIADMYVTTFNSSPWNDEWTIETASKRLYQMIN FT CESSYGLVAYEDKLICGMILGSEEQYYNSVMFNIKEFCVRNDVRSKGFGTKIFEEFENR FT LKNRGITEIILLTSRDDRTEGFYKKKGLRSYNEMVFMGKQI" FT misc_feature complement(1133109..1133354) FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 32.2, FT E-value 1.3e-06" FT /inference="protein motif:Pfam:PF00583" FT CDS 1133974..1134774 FT /transl_table=11 FT /locus_tag="CBO1033" FT /product="D-alanyl-D-alanine carboxypeptidase" FT /EC_number="3.4.16.4" FT /db_xref="GOA:A5I0M5" FT /db_xref="InterPro:IPR003709" FT /db_xref="InterPro:IPR009045" FT /db_xref="UniProtKB/TrEMBL:A5I0M5" FT /protein_id="CAL82586.1" FT /translation="MRNRRQKKQILRRVNFIITIVIILCTIQILSNKYNRSIQSKRVQA FT IKEKETISENNKQQTIKKKETNSKNNKQQALKQSLLLVNRDNKLDEHYLPNDLTVPNIR FT FLGNSNFEVRRLRRVASGALENLFQEAKNENIILLGVSGYRNYHYQVNVYNNSVYRNGQ FT QHADKYVAQPGTSEHQTGLAMDIVSTEYTNLDENFVNTRAYKWLKENCYKYGFIIRYPK FT EKEDITGYNFEPWHIRYVGIEVATEIMNKGITLEEYLQEGNCNK" FT sig_peptide 1133974..1134106 FT /locus_tag="CBO1033" FT /note="probabilty 0.957, with cleavage site probability FT 0.320 between residues 45 and 46" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1134310..1134747 FT /note="Pfam match to entry PF02557 VanY,D-alanyl-D-alanine FT carboxypeptidase, score 170.7, E-value 2.6e-48" FT /inference="protein motif:Pfam:PF02557" FT CDS 1135073..1135300 FT /transl_table=11 FT /gene="tlp" FT /gene_synonym="tlpA" FT /locus_tag="CBO1034" FT /product="putative acid-soluble spore protein" FT /db_xref="InterPro:IPR017524" FT /db_xref="UniProtKB/Swiss-Prot:A5I0M6" FT /protein_id="CAL82587.1" FT /translation="MKNKPDDRRDNVDKIQYNITKTIQNCELADEMIAKTDDEKTKKTL FT IEKNERRREALDGMREEIKDEARDKKNGYM" FT CDS 1135518..1136204 FT /transl_table=11 FT /locus_tag="CBO1035" FT /product="two-component response regulator" FT /db_xref="GOA:A5I0M7" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:A5I0M7" FT /protein_id="CAL82588.1" FT /translation="MSNILIIEDEKRVSEVLKAYLEKEGYKVYCTTKGLESIEIFKSID FT IQLIILDLMLPDISGEEVCRIIRQSSDVHIFMLTAKGALNDRIEGLNIGADEYLIKPFS FT PRELTARVNALFRRLSTYNSTSNLIFDDGRLGIDYDKRVVKVNGKEVSITPNEFDILYT FT LVSNKGKVLSREQLINKIFGIDFNGYDRTIDVHIKNIRKKIEEDTKNPKYIVTVMKVGY FT KFGGEN" FT misc_feature 1135521..1135877 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 121.1, E-value 2.2e-33" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 1135959..1136189 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 83.2, E-value 5.7e-22" FT /inference="protein motif:Pfam:PF00486" FT CDS 1136205..1137560 FT /transl_table=11 FT /locus_tag="CBO1036" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5I0M8" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5I0M8" FT /protein_id="CAL82589.1" FT /translation="MHTIRKRLSILFVICSVAGILLVTLFVNATINNKFDAYIVDVQDK FT RYQRIVSYFEEVYKAQGKWTKNSGVELMHEAHMGNYCLTLLDINKKTIWGMNPNDIRLN FT TMPVKDRGVYNTKTFEIKSEGKVVGYVGIGQYSSLLLSEEDISFKTSINKSIVASGILT FT LVIIITISLYFSKQFSIPIKEVANLSVNLSKGDFDGKSSVESNIEELENLRKSVNILAE FT KLKHQDSIRRRLVSDISHEIRTPLNVLQNNLEAMIDGVLPVTEERLNCLNEEVVRFGRL FT LNNLNVLKEFESESIKLNFQKIFLDELIADICSDFYAIAENKNIKLQYHIENHEDYSIT FT GDRDRLKQVFINLLSNALKFTEDGGEVLIKIYKSDKNIVVEVKDNGVGIKKEDLPFIFE FT RLYRGDKSRHQFKGNGIGLTIVKNILQLHYASIDLESEEGEGTTFKVYFHRM" FT sig_peptide 1136205..1136289 FT /locus_tag="CBO1036" FT /note="probabilty 1.000, with cleavage site probability FT 0.932 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1136232..1136300,1136667..1136726) FT /note="2 probable transmembrane helices predicted for FT CBO1036 by TMHMM2.0 at aa 10-32 and 155-174" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1136670..1136882 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 22.2, E-value 0.0013" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 1136892..1137086 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 52.2, E-value 1.2e-12" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 1137225..1137557 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 143.9, FT E-value 2.9e-40" FT /inference="protein motif:Pfam:PF02518" FT CDS 1137664..1137798 FT /transl_table=11 FT /locus_tag="CBO1037" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0M9" FT /protein_id="CAL82590.1" FT /translation="MFKFLKNFLKKLEQQNSKSFGNNKLDCCDLNKSNNNRKTDNKSK" FT CDS 1138095..1139354 FT /transl_table=11 FT /gene="cypC" FT /locus_tag="CBO1038" FT /product="fatty acid beta-hydroxylating cytochrome P450" FT /EC_number="1.14.-.-" FT /db_xref="GOA:A5I0N0" FT /db_xref="InterPro:IPR001128" FT /db_xref="InterPro:IPR002401" FT /db_xref="UniProtKB/TrEMBL:A5I0N0" FT /protein_id="CAL82591.1" FT /translation="MLIEEHIPKDKGIDNTFALLQERYLFIRNRVDRYQSNLFETHLFG FT QKVICMTGEEAAKLFYNEELFQRNGAAPKRVQKTLFGENAIQTMDDEEHIHRKHLFMSL FT MTPLSQKILAELVMEKWKSSIDKWEHDKEIVLFNEAKETLCQISCKWAGVPLHKSEIKN FT RAEDFNLMVNALGAVGPQYWKGKMARSRAEKWISGIIQDVRSSRLDAEESTPLYAMAFH FT RDLDGNQMDTSMAAIELINVLRPIVAISTFITFAALGLYEHPECKEKLISGGDSYVEMF FT AQEVRRYYPFAPFLGARVRKDFILNECELKKGMLVLLDMYGTNHDLQIWEKPNEFYPER FT FKEWKGSLFDFIPQGGGDPVKTHRCPGEGITMEIMKGSLDFLVNKIEFQVPKQDLSYSL FT IKIPTLPKSGFIMTNIKRKF" FT misc_feature 1138116..1139333 FT /note="Pfam match to entry PF00067 p450, Cytochrome FT P450,score -36.2, E-value 3e-08" FT /inference="protein motif:Pfam:PF00067" FT CDS complement(1139494..1141302) FT /transl_table=11 FT /locus_tag="CBO1039" FT /product="putative heavy metal transporter" FT /db_xref="GOA:A5I0N1" FT /db_xref="InterPro:IPR006121" FT /db_xref="InterPro:IPR017969" FT /db_xref="UniProtKB/TrEMBL:A5I0N1" FT /protein_id="CAL82592.1" FT /translation="MSIKKERIKVYDMTCTSCENRVEKAIKKLEGVLHAKASYMGEFVE FT IEYDDKLCNQNKIKSAIKNAGYSTQSSNDYNFMGVLIIAAVIILLGLKTSGFDMEEKLT FT NASYIVLFVVGVLTSIHCVGMCGGIMLSQSLSSESNNKFEAMKPAVLYNLGRVLSYTLL FT GGIVGTLGSVFSLSITTKAALQIFAGLFMIMMGFNMAGFNIFRKFHIKLPHFACTVKNK FT SGSPFIVGLLNGFMPCGPLQTMQLFALGTGSGVQGSLSMFMFSLGTVPLMLTFGALSGL FT LSKGHTKKLLKFSGVLIIVLGLIMGNRGLTLAGININPITALASNTKSSDDFSNTNVAK FT ATLENGVQVIKMTANNNGYTPNAFYVQKGIPVKWIINGEQLNSCNNSIIAQSIMEKEFK FT IKKGENIINFTPGDKDINFSCWMGMISGVIKVVDNLDAVDTSKTDPSLPPASTGPSCCA FT VPVDESDQSEQSSIYGNNMALVPTEKLINKALPSGEYQSATFKGIGSELQPLIAVTGNG FT SKTKLTFNLNDFDNAEGKYIILDLETRNDIFSFTAKKGVNEVEFSPKKAGSYGILKDNV FT ILGIIEVVDDLESADMEKIREKHVDE" FT misc_feature complement(order(1140358..1140426,1140460..1140528, FT 1140556..1140624,1140685..1140753,1140781..1140849, FT 1140910..1140978,1141006..1141074)) FT /note="7 probable transmembrane helices predicted for FT CBO1039 by TMHMM2.0 at aa 77-99, 109-131, 152-174,184-206, FT 227-249, 259-281 and 293-315" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1141090..1141284) FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 49.3, E-value FT 9e-12" FT /inference="protein motif:Pfam:PF00403" FT misc_feature complement(1141186..1141275) FT /note="PS01047 Heavy-metal-associated domain." FT /inference="protein motif:ProSite:PS01047" FT CDS 1141839..1142075 FT /transl_table=11 FT /locus_tag="CBO1040" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR018649" FT /db_xref="UniProtKB/TrEMBL:A5I0N2" FT /protein_id="CAL82593.1" FT /translation="MFGCGFGRSAFTGGWSTWMIVPMIFRLLIIIGIIYAVVKLFKSHM FT VNNNNAVKILNEKYATGEISEEEYLKRKNIMSK" FT misc_feature 1141881..1141949 FT /note="1 probable transmembrane helix predicted for CBO1040 FT by TMHMM2.0 at aa 15-37" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 1142091..1142120 FT /note="palindromic repeat at this position" FT CDS 1142345..1143046 FT /transl_table=11 FT /locus_tag="CBO1041" FT /product="two-component response regulator" FT /db_xref="GOA:A5I0N3" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0N3" FT /protein_id="CAL82594.1" FT /translation="MKKLFKILVVDDEERILDVVKAYLEKEDYEVITAMDGEEAIKLFK FT EISFHLVILDLMLPKISGEEVCSKIREFSNVLIIMLTAKVEEEDKLEGLSIGADDYLTK FT PFSVRELVARVKALIRRAYRGKYPLAEHLILNNGDLEVDIRKMKVLKNGKVVTLTPYEF FT KVLVSLLTNPGQVFTREQLVEQAFGYDYESFDRTVDTYIKNIRQKIEDNPKAPNYITTV FT YGVGYRFGGKN" FT misc_feature 1142357..1142713 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 141.3, E-value 1.8e-39" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 1142798..1143031 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 92.1, E-value 1.1e-24" FT /inference="protein motif:Pfam:PF00486" FT misc_feature 1142906..1142935 FT /note="PS00230 Neuraxin and MAP1B proteins repeated region FT signature." FT /inference="protein motif:ProSite:PS00230" FT CDS 1143046..1144452 FT /transl_table=11 FT /locus_tag="CBO1042" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5I0N4" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5I0N4" FT /protein_id="CAL82595.1" FT /translation="MKMSLKKKLSLGFLIAVIGSIIIASSISNYMINNRFNEYLVQEHK FT NKINQIIVAIEDMYKEDKGFQALKYDEIKRYAVLNELYIEIKDKKGSKIFTSGDDHLKH FT RSMMNSMMGHGMGNMMGKMKNLDLGDYKEEEQWLKKNNVTFGKITIGYFGTSYLNNGAL FT TFKRTLNHSFIVSMVITFILGLILSWILSKQLSKPLVKIKEIANTMRMGNLNIRSNIKS FT NTTEIQELSNSINYLAETLQQQEALRKRLTSDMAHEIRTPITTLKTHVEAIIDGIWEPT FT EERLQVFYEELERLTNLVNNLRNISKLEKAETVVNKTNLNITKEIEKVVETFNPLYEKS FT GFKIVTKLEKDVYGFIDKDKLKQIMHNLLSNSHKYLNEDGLVKVSLSKGKDKIFIKVED FT NGEGIPEEDLPHIFERFYRSDVSRNKTTGGTGLGLTITKTLVEAHGGHIRVESKMGVGT FT KFIIEIKTTL" FT sig_peptide 1143046..1143121 FT /locus_tag="CBO1042" FT /note="probabilty 1.000, with cleavage site probability FT 0.655 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1143073..1143141,1143550..1143618) FT /note="2 probable transmembrane helices predicted for FT CBO1042 by TMHMM2.0 at aa 10-32 and 169-191" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1143562..1143774 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 54.5, E-value 2.4e-13" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 1143784..1143978 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 57.3, E-value 3.6e-14" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 1144111..1144446 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 149.1, FT E-value 8.3e-42" FT /inference="protein motif:Pfam:PF02518" FT CDS complement(1144792..1145478) FT /transl_table=11 FT /locus_tag="CBO1043" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0N5" FT /db_xref="InterPro:IPR014825" FT /db_xref="InterPro:IPR016024" FT /db_xref="UniProtKB/TrEMBL:A5I0N5" FT /protein_id="CAL82596.1" FT /translation="MNKTIREQIFQLADEDYQKFSSKLLPTTNNILGVRLPQLRKLAKV FT IAKEDWRKFLVNSDVKYFEEIMLQGLVLGYAKADIEEILKYVADFVPKIDNWSVCDSFC FT TGLKFTKDNIDRVWNFIQPFLYSNKEFEVRFGVVMLLDFYINDEYIDHVIKSLDTIKHP FT GYYAKMAVAWTISICYIKFPKQTMEYLKNNTLDNFTYNKALQKITESLRIDKETKTIIK FT SMKRKL" FT CDS complement(1145714..1146472) FT /transl_table=11 FT /locus_tag="CBO1044" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5I0N6" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5I0N6" FT /protein_id="CAL82597.1" FT /translation="MSDANKHICSIAEKFFLCTNIPIKSFSYKGDLIDSRGYNYMFQDL FT FDDNNIYEKLDKDSITKNGYYTININALNKINFTAFYICPKTVHKGVYIMGPYSSYKGN FT NKGIPYKPLCCIPHLISLLRNIALDSRYIKEKVLTRRMPNSLHIRKAIDLLDANYSDDI FT SLDDISRHLKINKSYFCSILKKETGKTFSQLVNEIRIEKSKELLTKNDLSILEIALSVG FT FNNQNYFSSTFKKFNNKTPIEFRNENLILQ" FT misc_feature complement(1145735..1145869) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 42.8, E-value 8.2e-10" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(1145750..1145878) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature complement(1145885..1146025) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 46.4, E-value 6.7e-11" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(1145921..1145986) FT /note="Predicted helix-turn-helix motif with score 996.000, FT SD 2.58 at aa 163-184, sequence ISLDDISRHLKINKSYFCSILK" FT CDS 1146718..1147671 FT /transl_table=11 FT /locus_tag="CBO1045" FT /product="ferric siderophore ABC transporter, permease FT protein" FT /db_xref="GOA:A5I0N7" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5I0N7" FT /protein_id="CAL82598.1" FT /translation="MKKRYLILALIILSICSIFIGVKDISFIDIFNSDDVKLKVLLISR FT IPRLISIIVVGVSMSIAGLIMQQISRNKFVSPDTASTIDSAKLGVLVALMIFPSATLTE FT KMIVSFIFSLLGTFLFMKILKKIKVKNSIFIPLVGIMLGNIIDSITTFFAYKYDLIQSI FT ASWLQGDFSLIIKGNYELIYFSLPLVVIAFIYANKFTVAGMGEDFSKNLGVNYNRIINI FT GLVIVALISSLVVITVGKIPFLGLIVPNIVTLYKGDNLKNSLCSTALLGAVFLLGCDIL FT GRLVIYPYEISIGLVVGVIGSMVFLYLLFRRNGNEV" FT sig_peptide 1146718..1146781 FT /locus_tag="CBO1045" FT /note="probabilty 0.978, with cleavage site probability FT 0.620 between residues 22 and 23" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1146730..1146783,1146841..1146909,1147033..1147086, FT 1147114..1147182,1147261..1147329,1147372..1147473, FT 1147507..1147575,1147588..1147647) FT /note="8 probable transmembrane helices predicted for FT CBO1045 by TMHMM2.0 at aa 5-22, 42-64, 106-123, FT 133-155,182-204, 219-252, 264-286 and 291-310" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1146778..1147650 FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 159.1, E-value 8.2e-45" FT /inference="protein motif:Pfam:PF01032" FT CDS 1147661..1148611 FT /transl_table=11 FT /locus_tag="CBO1045A" FT /product="ferric siderophore ABC transporter, permease FT protein" FT /db_xref="GOA:A5I0N8" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5I0N8" FT /protein_id="CAL82599.1" FT /translation="MKCRRRVVLLGVFSIALIILFIFTGISKGNYDYVLPRRLLKVLAI FT SLTAGSIAFSSMIFQTIANNRILTPSVLGLDSLYMFIQTFVVFILGANNKAVMNSNFNF FT LISISLMVMFSMILYRFLFKREDKNIFFLLLTGLIFGTLFQSLAAFMQTIIDPNAFLVI FT QDKMFASFNKVNTDVLLISIIGILLVLAYVYDYVKVLDVMLLGREQAINLGVSYDKVVK FT KMLIVVSILVSISTALVGPITFLGLLSVNLTYEFINSYKHKYLIIGSVFISIIALVGGQ FT FLVERFLNFGTTLSVIINFIGGIYFMYLLLKESKL" FT CDS 1148608..1149363 FT /transl_table=11 FT /locus_tag="CBO1046" FT /product="ferric siderophore ABC transporter, ATP-binding FT protein" FT /db_xref="GOA:A5I0N9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5I0N9" FT /protein_id="CAL82600.1" FT /translation="MIEIKNVTKKYGDKKVIDDVSLKIEKGKITSFIGPNGAGKSTLLS FT IISRLITKDGGEVFIDGTEVSKWDNKSLAKKISILKQSNHTNIRLTIKELVSFGRFPYC FT NGNLSSEDLKYVNDAIAYLELKDIENKYLDELSGGQKQRAYIAMIVAQNTEYILLDEPL FT NNLDMKHSVQIMKILRRLVKERNKTVILVIHDINFASCYSDYIVALKNGVVASEGNTHD FT IIDKDILSNIYEMDFNIKDIEDQKICIYF" FT misc_feature 1148686..1149243 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 176.6, E-value 4.4e-50" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1148707..1148730 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1149437..1150381 FT /transl_table=11 FT /locus_tag="CBO1047" FT /product="ferric siderophore ABC FT transporter,substrate-binding protein" FT /db_xref="GOA:A5I0P0" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:A5I0P0" FT /protein_id="CAL82601.1" FT /translation="MNKKVWTIVGILIVFIVGGTLFLKPKENKKEEASSVDIKITHKLG FT EATLKKNPKKVVVFDYGTLDSLDKMGIEIKGLPKSNIPSYLSKYKDDKYIDVGTLFEPN FT FEKLNEIKPDVIFISARQSKAYEELNKIAPTIHLNTENGKYMESVKSNLEKLGKVFDKE FT DFVRDEIKKLDDSVKDINKKASEGGKKALVILANDGALSAYGKGSRFGIIHEELGFPLS FT DEHIDTAVHGQKISFEYVVEKNPDYIFVVDRGAVVQGGHKSVNKILENDLIKTTKAYKN FT NKIISLNPELWYISSGGIVSTTEMLKEIKDSIK" FT misc_feature 1149593..1150309 FT /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic FT binding protein, score 193.4, E-value 3.8e-55" FT /inference="protein motif:Pfam:PF01497" FT CDS 1150438..1150566 FT /transl_table=11 FT /locus_tag="CBO1048" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0P1" FT /protein_id="CAL82602.1" FT /translation="MTNNPYGPIIENKFQYHSYLDKILVENFILIFYLVKKFRYIN" FT CDS 1150577..1151584 FT /transl_table=11 FT /locus_tag="CBO1049" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5I0P2" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5I0P2" FT /protein_id="CAL82603.1" FT /translation="MGMELCTAKQYEIKSSKANDCCICDGFNKIYNKGCGQYSYPIPQE FT LGSGHLKQLLSCENARIMEFDINLLKQVELNGTSRIPHIDMLFCLGDDLQWDLPQTGKK FT FEMLSGESYMGTSEETIKRCIYPAKCDIRLIEIKMPLKKMKDTIDKICEECSSCRHFSN FT EVWADNLKITPSINVILNQMLKCPYEESLRYLYMEGKLMELVAVYLNEVMYQSKGISKS FT ISLSKDDVKSIYKAKDILDKSITQKITLSYLSKEVCLNEFKLKKGFKEVFGMPVYTYLL FT DKRLELAKFFLEEKQLRVSDVANLVGYGNMSHFAAAFRKKYGVNPSEYIKDISK" FT misc_feature 1151279..1151419 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 20.7, E-value 0.0037" FT /inference="protein motif:Pfam:PF00165" FT misc_feature 1151426..1151554 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature 1151435..1151569 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 47.2, E-value 3.9e-11" FT /inference="protein motif:Pfam:PF00165" FT CDS 1152099..1153901 FT /transl_table=11 FT /locus_tag="CBO1050" FT /product="composite ABC transporter, ATP-binding/permease FT protein" FT /db_xref="GOA:A5I0P3" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:A5I0P3" FT /protein_id="CAL82604.1" FT /translation="MNKKKKGIPRLLEIAGEKQGLLICSSIFSAISAILMLLPYIAVYF FT IIAELLKNAANPINVNSTQMLHWGTAALVGLVGGIVFMYISGLMSHTAAYRILYSLRVR FT MSEHIGKLPLGYLSNTSTGIVKKTFEQNVEKIEAFVAHQLPDMINVFVTMIITIIMMLT FT LNPWLTLAAMVPLVLGFLIQMKKRSGKAAEESANKYYNALERINSSTIQYVKGVPAVKI FT FGRNVYSFRKFYDDMISYRDYCVKYTDQYQNTYITSKVLLNSTLTFILPVGILLMGGRS FT GDLSFAQTLLFFIILAPGVASPMLRFMTFASSLGDISEGVQRIDKIFAEKTICEANNPR FT IPSSYDIEFDNVSFSYESEDTSTRKEALSKVSFKAKKGSCTALVGPSGSGKSTVANLIP FT RFWDIQKGHIRIGGIDIKEISTENLMDLVSFVFQDTFLFHDTLYENIRVGRSDATKEEI FT FKAAKAAQCHEFITGLEKGYDTIVGEGGTHLSGGEEQRVCVARAILKNSPILVLDEATA FT FSDSENEYHMQLALRELMKNKTVIMIAHRLTTIKDAENIVVMKDGTIVEADTHDVLINK FT DGLYKKLWNSYTVASNWGISKGGI" FT misc_feature order(1152159..1152227,1152294..1152362,1152540..1152608, FT 1152861..1152929,1152948..1153001) FT /note="5 probable transmembrane helices predicted for FT CBO1050 by TMHMM2.0 at aa 21-43, 66-88, 148-170, 255-277 FT and 284-301" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1152162..1153010 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 31.1, E-value FT 2.7e-06" FT /inference="protein motif:Pfam:PF00664" FT misc_feature 1153230..1153784 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 193.2, E-value 4.4e-55" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1153251..1153274 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1153903..1155618 FT /transl_table=11 FT /locus_tag="CBO1051" FT /product="composite ABC transporter, ATP-binding/permease FT protein" FT /db_xref="GOA:A5I0P4" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:A5I0P4" FT /protein_id="CAL82605.1" FT /translation="MKIFRNITAGHPEKLVKPGAYTILANIIGMLPFGLAIAAIQIIFK FT PFVTPGTTLDIAKLWMVVGALILSMLIMFLAEIPAYRHAYRDAYMTAAEGRANLAEHMR FT KLPLGYLFCKDAGMLGNMMMGDFTMVESGMSHVVPKLMGALVTPVLAFIGLAFMDWRMS FT LSMFAAMPVALLIIIGTSKLQKVLGRELTEAKVDASNRLQEYLTGIRVIKSCNMTGEHF FT QHLEGSFYNLMKKSIKMEGLLQSIVLTVTPLLRAGLTVMIYVGSYLLMGGTLTIMTLAT FT FLVIGTRIFEPLSEAIINLAELRYDAQAGERIIKFMEEPVMSGEKSPPASNDIELQHVD FT FSYDNVKVLKNVSTKMKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKEDMKE FT MNPESLLKRISMVFQDVYLFQDTIGNNIRFGREDATQKEVEEAAKKACCHDFIMKLPQG FT YDTAVGEGGCTLSGGEKQRVSIARAMLKDAPVVLLDEATASLDPENEMDVQKAINQLIK FT GRTVIVIAHKLKTIRSADNIIVLDDGRVVEQGKHEELIKLKGLYARLWKLQQVS" FT misc_feature 1153960..1154781 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 30.8, E-value FT 3.4e-06" FT /inference="protein motif:Pfam:PF00664" FT misc_feature order(1153966..1154034,1154077..1154145,1154308..1154376, FT 1154386..1154439,1154689..1154757) FT /note="5 probable transmembrane helices predicted for FT CBO1051 by TMHMM2.0 at aa 22-44, 59-81, 136-158, 162-179 FT and 263-285" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1154977..1155531 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 249.1, E-value 6.3e-72" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1154998..1155021 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1155310..1155354 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS complement(1155823..1157196) FT /transl_table=11 FT /locus_tag="CBO1052" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5I0P5" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:A5I0P5" FT /protein_id="CAL82606.1" FT /translation="MEKQQILQISRFLSGYSTMIFLYTIKYYFYKNFLGFKNKVWHFTL FT CALLVTVIDFYMMKTISLLWSIIINNIIWLLIICFLCNGNFLMKFYAVILEEAALLLIN FT LTFLTFDFTILPTIHNINVSFNKHIIISFITNIINDLIRYTILFVFLKNICKFLNLKEK FT SIKLYENLFLLIPCLSIYSLGLIFYIIQPININNKRYYLPYIFPRIYYTLPFISFALLV FT SLLIMAYTFKKMLEGQLEENKNLLMEQQFKLQLTHSNNIEMLYKGIRGIIHDMNNHVSC FT LKNLAATNNIEDIKKYLINIDETISKLDFKIKTGNSISDAVINEKYNIAKTNKIEFICD FT FLLPKETLLEPVDLCIILSNALDNALEACMRITDSNLQKKICIKSYIKNMYLIIEISNS FT ATDKIQYAENKIISTKTDKNNHGIGISNIKTVAKKYNGIVDILEEKHKFIINIMLKIK" FT misc_feature complement(1155826..1156152) FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 17.2,E-value 0.0012" FT /inference="protein motif:Pfam:PF02518" FT misc_feature complement(order(1156516..1156584,1156627..1156686, FT 1156744..1156812,1156840..1156899,1156936..1157004, FT 1157107..1157163)) FT /note="6 probable transmembrane helices predicted for FT CBO1052 by TMHMM2.0 at aa 12-30, 65-87, 100-119, FT 129-151,171-190 and 205-227" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1157199..1157906) FT /transl_table=11 FT /locus_tag="CBO1053" FT /product="two-component response regulator" FT /db_xref="GOA:A5I0P6" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR007492" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:A5I0P6" FT /protein_id="CAL82607.1" FT /translation="MLKLAICDDEKTQREEIVGIIVEALRLKNKQYKISEFNNGEDLIS FT STDDFDIYFLDIKMDKLTGLEVAKKIRLINEEAVIVFITGLKDYVFDAFDVKAFHYILK FT PIDESKLKDVLCSALLQFDKKDKFIIAKTISQATKIFLKDIMYIESQHRKLKIHTKNNI FT IEYYHKISDIEKELYGCNFFRCHKSYIVNLKYVESYDNVFITLINSEKIYVSKYRLDDF FT SKAFMYYLKNEVQ" FT misc_feature complement(1157226..1157525) FT /note="Pfam match to entry PF04397 LytTR, LytTr DNA-binding FT domain, score 102.6, E-value 8.1e-28" FT /inference="protein motif:Pfam:PF04397" FT misc_feature complement(1157538..1157903) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 50.9, E-value 2.9e-12" FT /inference="protein motif:Pfam:PF00072" FT CDS complement(1157994..1158869) FT /transl_table=11 FT /locus_tag="CBO1054" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0P7" FT /protein_id="CAL82608.1" FT /translation="MNISFSPKHQMGSINLNYPSNAKTFVNNRNSQKQDLINRGNKITC FT FKGNSGKNNVLKNLMEQKSNLMEMKNSIMERGLKKDNDPLTIKEKLESIDKQIKEIDKQ FT INDLQLEEQRNSMGIESKDKDKNKKNQNSKKTSNTYSEKDMKTDESMDNLLSLSTNLSQ FT AKSLSSQKTLISGRARVLDCEIKTDEKRGLDPVNKKEQLDKIKNGLENIDKELGKNLKN FT INNNNTENNTSNNMVNNNEQSKDVNSSSVSKSSNELAIRRQQIVQNIKHYEDNLPNKAK FT DNKEQINIIA" FT CDS complement(1159108..1159539) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO1055" FT /product="putative glycosyltransferase (gene fragment)" FT /note="Partial CDS. Similar to internal regions of many FT including Clostridium acetobutylicum tpr-repeat domain FT fused to glycosyltransferase cac3311 SWALL:Q97E09 FT (EMBL:AE007828) (582 aa) fasta scores: E(): 4.9e-37,67.15 FT 38d in 137 aa, and to Vibrio parahaemolyticus CpsF cpsF FT SWALL:Q847V1 (EMBL:AY217749) (350 aa) fasta scores: E(): FT 0.0012, 32.2 38d in 118 aa" FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82609.1" FT misc_feature complement(1159165..1159461) FT /note="Pfam match to entry PF00534 Glycos_transf_1,Glycosyl FT transferases group 1, score 42.2, E-value 2.3e-11" FT /inference="protein motif:Pfam:PF00534" FT CDS 1159962..1163123 FT /transl_table=11 FT /locus_tag="CBO1056" FT /product="putative cell surface protein" FT /db_xref="GOA:A5I0P9" FT /db_xref="InterPro:IPR001434" FT /db_xref="InterPro:IPR002860" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/TrEMBL:A5I0P9" FT /protein_id="CAL82610.1" FT /translation="MATISGRVVFDRDRSATINAGDSGIANVPVVLQNTATDVRLVVLT FT DTNGNYSFINVPNGDYRIVQFFGTPGGVPTPGDFNNAVVGPVPVGTNPPISFASDPPPG FT STNLDSLTPDTLLVTVTGVDLTNENFLDGPVIYTPIQNILDPCVSVSNVNLINVADNGT FT FGLFPPGTPANTGAPVEPYPGVTSDFTYVLPDPTKFTPIGGEYTVQNIMTNAMSNEIGA FT WWRIADHTTGNETGRMMVVNGFNPGAIFFRDVVSVQPNTNYLFSSWILNLFKVIGYPNP FT ELGVRILASNGDVLYSATLWAQIPVNTNAPEWKQIGTVINSQNNTSLTVEFLSEGPEVI FT GNDYAIDDVALNEVQVPLFTPVKTISTPVANVGETVTYTVTLENTCTSPLTNVFFKDNI FT PNGLLFVAGSVIVNGVSEGSFDPNVGFTIPNIPGGSTATITFDAVVNAVPTPNPALNTA FT TINYSYTPVEGGIENNFTVDSNTVPLEVRAVVADVGVIKTGSPNPVMSGETLTYTIDVS FT NLGPGDAQNVVLTDTIPPEITGAEFSTDGGVTFSPWPGSFNIGTLLNQETRTILIRGTV FT ASVAPGFITNTAEVTSTTPDPNLSNNTSTSVIEVNESTEEADVGVFKSVGLNPVPAGEV FT VVFPIRVSNFGPADAQNIVLTDTIPPEITGAEFSEDGGSTFSPWTGSLVIETLLNGETR FT DILIRGTVSPTAAGIISNTATVTSTTPDPNPSNNTSTVDVEVLAPVVADVSVVKTASPN FT PVMAGELLTYTINVTNFGPSSAENVVLTDVISPEITGAEFSTNGGETFSPWPGSLNIGT FT LPASKTKTILIRGIVSPTATGIISNTATVTSTTPDPNPNNNTSTVEVEVIPVVLGEADV FT SVVKTASPNPVAPGEADVSVVKTASPNPVAPEEADVSVVKTAITKRVRPGDTVVYTIVV FT SNAGPAAAQNAVVTDTIPPEIIRPEVSINGGLTFSPWPGSFDIGTLPAGASITIIIRGK FT VVSSSTKCKCITTITNTAKVTSTTPDPNLNNNTSTVTIKVCRCFKVCCKCCCCNKCKCD FT CKNEY" FT misc_feature 1160961..1161188 FT /note="Pfam match to entry PF01345 DUF11, Domain of unknown FT function DUF11, score 43.7, E-value 4.3e-10" FT /inference="protein motif:Pfam:PF01345" FT misc_feature 1161384..1161590 FT /note="Pfam match to entry PF01345 DUF11, Domain of unknown FT function DUF11, score 45.9, E-value 9.2e-11" FT /inference="protein motif:Pfam:PF01345" FT misc_feature 1161582..1161617 FT /note="Pfam match to entry PF02012 BNR, BNR/Asp-box repeat, FT score 11.9, E-value 1.6" FT /inference="protein motif:Pfam:PF02012" FT misc_feature 1161732..1161968 FT /note="Pfam match to entry PF01345 DUF11, Domain of unknown FT function DUF11, score 30.3, E-value 4.5e-06" FT /inference="protein motif:Pfam:PF01345" FT misc_feature 1161960..1161995 FT /note="Pfam match to entry PF02012 BNR, BNR/Asp-box repeat, FT score 9.4, E-value 5" FT /inference="protein motif:Pfam:PF02012" FT misc_feature 1162110..1162343 FT /note="Pfam match to entry PF01345 DUF11, Domain of unknown FT function DUF11, score 51.3, E-value 2.2e-12" FT /inference="protein motif:Pfam:PF01345" FT misc_feature 1162335..1162370 FT /note="Pfam match to entry PF02012 BNR, BNR/Asp-box repeat, FT score 10.5, E-value 3.6" FT /inference="protein motif:Pfam:PF02012" FT misc_feature 1162605..1162832 FT /note="Pfam match to entry PF01345 DUF11, Domain of unknown FT function DUF11, score 53.9, E-value 3.8e-13" FT /inference="protein motif:Pfam:PF01345" FT misc_feature 1162824..1162859 FT /note="Pfam match to entry PF02012 BNR, BNR/Asp-box repeat, FT score 6.1, E-value 13" FT /inference="protein motif:Pfam:PF02012" FT CDS 1163311..1164810 FT /transl_table=11 FT /gene="chiD" FT /locus_tag="CBO1057" FT /product="chitinase" FT /EC_number="3.2.1.14" FT /db_xref="GOA:A5I0Q0" FT /db_xref="InterPro:IPR001223" FT /db_xref="InterPro:IPR001579" FT /db_xref="InterPro:IPR003610" FT /db_xref="InterPro:IPR003961" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:A5I0Q0" FT /protein_id="CAL82611.1" FT /translation="MKKVFKRIFPISLVLVMVFLFMPITNVFASSNSSDKILVGYWHNF FT DNGTGIIRLKDVSTKWDVINVAFGESIGDRATIKFSPEIGTDQEFKEDIAYLNSIGKKV FT VLSIGGQNGVVLLPDENAKKNFIDSMISLINKYGFNGIDIDLESGINLINNDKDFKNPK FT TPQIVNLISAVRAICDHYGPDFVLSMAPETAYVQGGYVAYAGIWGAYLPIIHGLRDKLT FT YIHVQHYNAGGNTALDGNNYTQGTADYEVAMAEMLLQGFPVAGNADNIFTPLKQEQVVI FT GLPACPSAAPSGGYIKPSEMKKALNYLMRGIPYGGKYKLVNSNGYPAFKGLMTWSINWD FT AKSNYEFSTSYREYFDNFKQPPVTEKPSIPIGLKGEAISKTQINIAWNLALGATSYDLK FT VDGNIINNVNNPYKHINLKPGSMHSYEVRAVNSVGNSEWSKAIIVQTKSESDVEKWGTN FT ILYKVGDIVNYEGINYRCIQTHTSLIGWEPINTPTLWEKTN" FT sig_peptide 1163311..1163395 FT /gene="chiD" FT /locus_tag="CBO1057" FT /note="probabilty 1.000, with cleavage site probability FT 0.989 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1163329..1163397 FT /note="1 probable transmembrane helix predicted for CBO1057 FT by TMHMM2.0 at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1163416..1164330 FT /note="Pfam match to entry PF00704 Glyco_hydro_18,Glycosyl FT hydrolases family 18, score 65.9, E-value 8.7e-17" FT /inference="protein motif:Pfam:PF00704" FT misc_feature 1163725..1163751 FT /note="PS01095 Chitinases family 18 active site." FT /inference="protein motif:ProSite:PS01095" FT misc_feature 1164409..1164627 FT /note="Pfam match to entry PF00041 fn3, Fibronectin type FT III domain, score 12.6, E-value 0.0019" FT /inference="protein motif:Pfam:PF00041" FT misc_feature 1164664..1164768 FT /note="Pfam match to entry PF02839 CBM_5_12, Carbohydrate FT binding domain, score 9.8, E-value 0.0085" FT /inference="protein motif:Pfam:PF02839" FT CDS 1165137..1167179 FT /transl_table=11 FT /locus_tag="CBO1058" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0Q1" FT /db_xref="InterPro:IPR004879" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR010819" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR012341" FT /db_xref="InterPro:IPR024705" FT /db_xref="UniProtKB/TrEMBL:A5I0Q1" FT /protein_id="CAL82612.1" FT /translation="MNLTSTNRLINEKSPYLLQHAHNPVDWYPWGEEAFEKAKIEDKPV FT FLSIGYSTCHWCHVMERESFEDEEVAEVLNKNFISIKVDREERPDIDSIYMNFCQAYTG FT SGGWPLTIIMTPDKKPFFAGTYFPKWGKYNVPGIMDILRSISNLWREDKNKILESSNRI FT LEQIERFQDNHRQGELEEYIIEEAAQTLLDNFDSKYGGFGTKPKFPTAHYILFLLRYYY FT FKKDEKVLDVINKTLTSMYKGGIFDHIGFGFSRYSTDNKWLVPHFEKMLYDNALLSMAY FT TEAYEATKNPLFKDITEKVLNYVKKSMTSEKGGFYSAEDADSEGVEGKFYLWTKEEIMD FT ILGEEEGELYCKIYDITSKGNFENKNIANLINTDLKIVDNNKDKLEKIREKLFEYREKR FT IHPYKDDKILTSWNALMIVAFSKAGRSLKNDNYIEIAKKSANFIIENLMDEKGTLYARI FT REGERGNEGFIDDYAFFLWALIELYEASFDIYYLEKSIEVANSMIDLFWHKEDGGFYLY FT SKNSEKLLVRPKEIYDGATPSGNAVASLTLNLLYYITGEDRYKDLVDKQFKFFATNIKS FT GPMYHLFSVIAYMYNISPVKEITLAYNKKDEDFYKFINEVNNRYIPFSIVTLNDKSNEI FT EKINKNIKDKIAIKDKTTVYICQNYACREPITDLEEFKSLLSTDS" FT misc_feature 1165149..1165367 FT /note="Pfam match to entry PF03190 DUF255, Protein of FT unknown function, DUF255, score 188.4, E-value 1.2e-53" FT /inference="protein motif:Pfam:PF03190" FT misc_feature 1165194..1165226 FT /note="PS00133 Zinc carboxypeptidases, zinc-binding region FT 2 signature." FT /inference="protein motif:ProSite:PS00133" FT CDS 1167503..1168498 FT /transl_table=11 FT /locus_tag="CBO1059" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR010343" FT /db_xref="InterPro:IPR021062" FT /db_xref="UniProtKB/TrEMBL:A5I0Q2" FT /protein_id="CAL82613.1" FT /translation="MKFIGYRTLKTAIGATIAMSIAGALGLKYSVSAGIITILSIQNTK FT RKSLSVAIQRMIACLLALTISSVLFTMLGHNAIVFGLFLLVFIPLAVKFNLQEGIVVNS FT VLATHILAEKHISINLFINEILLMFIGAGIALLLNLYMPSIEKEIWEDQFYIEEKMKEI FT LIQMSIALRELSVSLKEDKLFNDLEERLFKAKKRAYINLNNYFLLDVSYYADYMEMRIQ FT QFETLKKMRQHFHKFFMTYEQTEMIADFTKKVADSLHEENTGDDLLLDLEDLRGSFKKM FT NLPSTREEFENRALLFQFLNDMEQFLIIKNEFKKTIDKLDYERKDYKIKN" FT sig_peptide 1167503..1167599 FT /locus_tag="CBO1059" FT /note="probabilty 0.976, with cleavage site probability FT 0.495 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1167506..1168450 FT /note="Pfam match to entry PF06081 DUF939, Bacterial FT protein of unknown function (DUF939), score 479.0, E-value FT 4e-141" FT /inference="protein motif:Pfam:PF06081" FT misc_feature order(1167560..1167628,1167656..1167724,1167737..1167805, FT 1167848..1167916) FT /note="4 probable transmembrane helices predicted for FT CBO1059 by TMHMM2.0 at aa 20-42, 52-74, 79-101 and 116-138" FT /inference="protein motif:TMHMM:2.0" FT CDS 1168663..1169247 FT /transl_table=11 FT /locus_tag="CBO1060" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0Q3" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:A5I0Q3" FT /protein_id="CAL82614.1" FT /translation="MEKQEYYIDLNNKAEKMLRKGEFLGSGHNGIVYLLPDKKVIKIFK FT EKKVCKKEREILQKTNNSKYFPKVYDYGEYFILREYIRGERLDHYIKQNGINKRLTHNI FT IKLIKEFERLKFKKLDIRCKDIYVDKKYKLRIIDPKNNYSKTVVYPRHLMKGLNKLKVL FT DDFLIHVEKEEPKYYDLWSTRMKEYLEKGIK" FT repeat_region 1169310..1169465 FT CDS complement(1169560..1170261) FT /transl_table=11 FT /locus_tag="CBO1061" FT /product="putative membrane-associated protease" FT /db_xref="GOA:A5I0Q4" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5I0Q4" FT /protein_id="CAL82615.1" FT /translation="MNIDIPIIKNKSVQLIIITSIVLMCCTIMGIVDAIIKPSYAVKSA FT IKIILFLGCPLVYSHLTKQLSLKKLFCFKKQSFFMSLFLGMGVFIVIMGTYFSLRNVLD FT LSGITIALQSNIGVSKNNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAYSIS FT SIAFALYHIAMMLGWFSIVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAI FT NVIGFILFGIF" FT misc_feature complement(order(1169572..1169640,1169659..1169727, FT 1169737..1169790,1169827..1169895,1169953..1170021, FT 1170079..1170147,1170157..1170225)) FT /note="7 probable transmembrane helices predicted for FT CBO1061 by TMHMM2.0 at aa 13-35, 39-61, 81-103, FT 123-145,158-175, 179-201 and 208-230" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1169584..1169889) FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 27.2, E-value 4.1e-05" FT /inference="protein motif:Pfam:PF02517" FT misc_feature complement(1169812..1169835) FT /note="PS00030 Eukaryotic putative RNA-binding region RNP-1 FT signature." FT /inference="protein motif:ProSite:PS00030" FT sig_peptide complement(1170156..1170261) FT /locus_tag="CBO1061" FT /note="probabilty 0.971, with cleavage site probability FT 0.839 between residues 34 and 35" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1170377..1171183) FT /transl_table=11 FT /locus_tag="CBO1062" FT /product="metallo-beta-lactamase superfamily protein" FT /db_xref="GOA:A5I0Q5" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:A5I0Q5" FT /protein_id="CAL82616.1" FT /translation="MKLKVLVDNNTYIDQYYCGEPAVSYYIEDEDTSFLFDVGYSDLFI FT RNSNSLGIDLQNISSIVISHGHDDHTGGLKYYFGQNHKNNISIIAHPDAFNEKIIGGLK FT ICSPILKHELKEKCNLILSKDPIKVSENITFLGEIPKVNDFENIKPIGKQIIGKNSIDD FT YVIDDTALVYKSENGIYIITGCSHSGICNIIEYAKKVCKDNRVLGVIGGFHLFEVNEQV FT NKTIDYLKQNNVKELYPCHCTSFSVRAEIHKTLPLKEVGVGLELNW" FT misc_feature complement(1170461..1171123) FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 29.5, FT E-value 8.4e-06" FT /inference="protein motif:Pfam:PF00753" FT repeat_region 1171364..1171399 FT repeat_region complement(1171468..1171564) FT CDS complement(1171567..1173486) FT /transl_table=11 FT /locus_tag="CBO1063" FT /product="ABC transporter ATP-binding protein" FT /db_xref="GOA:A5I0Q6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I0Q6" FT /protein_id="CAL82617.1" FT /translation="MIIVTVENICKSYGEKTLFKDVSFTISDEYKIGLIGVNGTGKSSL FT LKIVTGEDSPDGGTITIPKGATIEYLDQNPDLDPNATILEQVFKGNSKIMSVIGEYEKA FT LDLISKNPEDEKLQNHLLTLTSEMDSLDAWDLESKIKTVLTKLNVTDFDKKIKELSGGQ FT KKRVALCSALISPCDLLVLDEPTNHMDNDTIDWLENYLQTRKGALLMVTHDRYFLDRVV FT NKTLELDYGTMYTYNCNYSQFVEKKAERKTLENSLEEKRQSLYKKELEWIRAGVQARGT FT KQKARIKRFEELGESSFNHNSNDIDISVAHSRLGKKIINIENLTKKFEEKTLIKDFNYI FT LLRNDRIGIVGNNGMGKSTLLNIITNKINSDSGSIDIGTTVNIAYFSQHSEDMDPNLRA FT IEYIRETAEFITTADGTKISASQMMERFLFTDDMQWCYISKLSGGEKRRLYLLKILMTA FT PNVLILDEPTNDLDIDTLKVLENYIDEFNGPVISVSHDRYFLDRTCNKILHFEGNGKIS FT EYIGNYSDFIYRKKEISNITSKEEKTNKALKENNSQKEKTSKLKFSYKEKLEYENIDKE FT IEKLEEKLSKLEEEVEINASDFMRLEDLLKEKDKVEEELLFKMERQEYLENLAKEIEEN FT KKTV" FT misc_feature complement(1171948..1172457) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 120.6, E-value 3e-33" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(1172413..1172436) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(1172794..1173402) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 142.8, E-value 6.5e-40" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(1172968..1173012) FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1173358..1173381) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1174124..1175338 FT /transl_table=11 FT /locus_tag="CBO1064" FT /product="putative membrane protein" FT /db_xref="GOA:A5I0Q7" FT /db_xref="InterPro:IPR011642" FT /db_xref="UniProtKB/TrEMBL:A5I0Q7" FT /protein_id="CAL82618.1" FT /translation="MSDLSTITEQEIEIKEVTKKNLRPVIGKEGFICLALFLGFFIILG FT TKMGTVNMFNTLMKTGYQLLMETVFYIMAIAVLAGAISGLLSEFGVISLINKGLSPLMK FT PLYKLPGASALGVVTTYLSDNPAIISLAKDKGFLKYFKKFQVPALTNLGTSFGMGLILT FT TFMIAQKSPTGENFVQAAIIGDIGAVIGSIVSVRLMIRHTRKYYGEHADEMVYESDDDG FT YDSLKYREVREGGVGARLLESLLEGGKSGVELGLAIIPGVVIICTLVLMLTNGPSPKGY FT TGAAYEGIAFFPWVGDKLSFILNPLFGFKHPEAIAFPITSLGAVGAAMSLVPQFLSKNL FT IGANEIAVFTAMGMCWSGYLSTHIAMMDSLNCRKLTGKAILSHTVGGLVAGVSAHIIYM FT LVTLI" FT misc_feature order(1174211..1174279,1174337..1174405,1174559..1174627, FT 1174655..1174723,1174874..1174942,1175063..1175131, FT 1175150..1175218,1175261..1175329) FT /note="8 probable transmembrane helices predicted for FT CBO1064 by TMHMM2.0 at aa 30-52, 72-94, 146-168, FT 178-200,251-273, 314-336, 343-365 and 380-402" FT /inference="protein motif:TMHMM:2.0" FT CDS 1175713..1176063 FT /transl_table=11 FT /locus_tag="CBO1065" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR006660" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:A5I0Q8" FT /protein_id="CAL82619.1" FT /translation="MNIQIFGVKKCFDTKKAERYFKERKIKYQFIDLNIKGLSKGELQS FT IKSAVGLNELINKDSREYKKTNIGSIRTDSVKEDLLLNNPKLYKTPIVRNGKKATVGYE FT PEIWKEWQSTDS" FT misc_feature 1175728..1176039 FT /note="Pfam match to entry PF03960 ArsC, ArsC family,score FT 64.1, E-value 3.2e-16" FT /inference="protein motif:Pfam:PF03960" FT CDS 1176086..1176205 FT /transl_table=11 FT /locus_tag="CBO1066" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0Q9" FT /protein_id="CAL82620.1" FT /translation="MAAILIECGNISKVSNEINLNSLYVICIISSNVKISGDF" FT CDS 1176296..1177174 FT /transl_table=11 FT /locus_tag="CBO1067" FT /product="putative cofactor modifying protein" FT /db_xref="GOA:A5I0R0" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5I0R0" FT /protein_id="CAL82621.1" FT /translation="MKRFKKFYIEITNVCNLACDFCPETRRKPQFMSIEIFDKILDQIK FT PYTDYIYFHVKGEPLLHPDIDKFLDLSYKKGFKVNITTNGTLINKAKDKIIMKKALRQV FT NFSLHSFDGNENSKNKDKYINDILSFVRDTIENNNIFISLRLWNLDEDNKTNLKKKRNA FT ELLHIIEKEFKLPYKIEEKITPGKGIKIYNRIYINQDHEFEWPDLKAEEDDGKGFCYGL FT RNQVAILVDGTVVPCCLDGEGIISLGSINEIDFSKIIDSERANNILDGFSRREAVEELC FT KKCGYRKKFSI" FT misc_feature 1176464..1176631 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 21.1, E-value 1.3e-05" FT /inference="protein motif:Pfam:PF04055" FT CDS 1177382..1178800 FT /transl_table=11 FT /gene="glpA" FT /locus_tag="CBO1068" FT /product="putative anaerobic glycerol-3-phosphate FT dehydrogenase subunit a" FT /EC_number="1.1.99.5" FT /db_xref="GOA:A5I0R1" FT /db_xref="InterPro:IPR006076" FT /db_xref="InterPro:IPR007419" FT /db_xref="UniProtKB/TrEMBL:A5I0R1" FT /protein_id="CAL82622.1" FT /translation="MFDVTIIGSGVTGAAVARELSKYNLKTCVVEKAIDVANGTSKANS FT GIVHAGEDPIPGTLKAKMNVRGNEMFDKLQEEIDFPFKRNESFVLCFDEKDIEKLEELR FT QRGLKNGLPDTMEILNREEALKLEPNLSEYVVAALRLPTGGIVSPYEFNIALAESAAMN FT GVEFKLETEIIDIEKKEDGYILKTNKGDIETKVVVNAAGVFGDKINNMVSEKKYHITAR FT KGEYLLFDKTVGDMVQRTIFQLPTKMGKGVLVTPTADGNLLLGPTSVDVEEKDDFGTTR FT EGLDTVAEKAKLSIKEIPMRQVITSFAGLRAHEENSDFIIEEAEDAKNFINAIGIESPG FT LTSAPAIGEYIREMIVEKLKPEENKEFNPIRKDIPKFREMTNEERKEMIKENSAYGKIV FT CRCEVVTEGEIRDAIRRPLGAKTVDGIKRRTRAGMGRCQSGFCSNRIVEILAEELGIKR FT NEVTKFGGNSKILY" FT misc_feature 1177385..1178461 FT /note="Pfam match to entry PF01266 DAO, FAD dependent FT oxidoreductase, score -16.8, E-value 1.5e-06" FT /inference="protein motif:Pfam:PF01266" FT misc_feature 1178570..1178743 FT /note="Pfam match to entry PF04324 fer2_BFD, BFD-like FT [2Fe-2S] binding domain, score 95.7, E-value 9.4e-26" FT /inference="protein motif:Pfam:PF04324" FT CDS 1178857..1180113 FT /transl_table=11 FT /locus_tag="CBO1069" FT /product="putative pyridine nucleotide-disulphide FT oxidoreductase" FT /db_xref="GOA:A5I0R2" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:A5I0R2" FT /protein_id="CAL82623.1" FT /translation="MQQYDVVIIGGGPAGLAAAIKAKEEGVDSILILERDKRLGGILNQ FT CIHNGFGLHTFKEELTGPEYAQRFVDKVEEMKIPYKLNTMVIDMNKDKIITAVNEEDGL FT IEVQAKSIVLAMGCRERSRGAINIPGTRCSGIYSAGTAQKFVNIEGEMPGKEVVILGSG FT DIGLIMARRMTLEGSKVKAVVELMPYSGGLKRNIVQCLDDFGIPLKLAHTITKIEGKER FT LEAVTIAKVDEKLKPIKGTEEYIKCDTLLLSVGLLPENDLSRKADVKLGVTGGPEVDET FT MQTNIDGVFACGNVLHVHDLVDFVTEESYNAGKNAADYVKGKKVEGEKIELVAENGVGY FT TVPKSIHKSNIENTVDVRFRVRNVFKDSFISVYFDNERVIHRKKKVIAPGEMETVKLTK FT DMFEKHLDCKKITVKVEGE" FT misc_feature 1178869..1179771 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 108.3, E-value FT 1.6e-29" FT /inference="protein motif:Pfam:PF00070" FT CDS 1180116..1180484 FT /transl_table=11 FT /locus_tag="CBO1070" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR012460" FT /db_xref="UniProtKB/TrEMBL:A5I0R3" FT /protein_id="CAL82624.1" FT /translation="MAVRELICIGCPLGCNLEVEIEDKEVKSVKGNTCPRGKIYAEKEC FT TNPTRILTISVNVENGEEDVVCVKTEKDIPKEKLMECVKILKDTTVQAPIKIGDVIVEN FT IADTGVNVIATKCLGCKN" FT CDS 1180573..1181910 FT /transl_table=11 FT /gene="glpT" FT /locus_tag="CBO1071" FT /product="glycerol-3-phosphate transporter" FT /db_xref="GOA:A5I0R4" FT /db_xref="InterPro:IPR000849" FT /db_xref="InterPro:IPR005267" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="InterPro:IPR021159" FT /db_xref="UniProtKB/TrEMBL:A5I0R4" FT /protein_id="CAL82625.1" FT /translation="MLKDLFKPASHIERMPKEKIDSAYRRYRIQVFISIYVGYLTYYFV FT RSNFSLAKVYLIQEGFTKTQLGFVASALGLAYGVSKFVMGNLSDRSNPRYFLAAGLILS FT GIVNLFFPMTKSITAMFALMLLNGWFQGMGWPPCGRTMTHWFSDKERGVKMSIWNTAHN FT VGGGFIATVVLIGVSIFGSWKGAFYLPAVIAIVVGILFILFAKDTPQSVGLPPIEEYKN FT DYPEIQVEDREKELSGKEILFKYVLNNKYLWYIAIANIFVYLVRYGVINWVPTYLKEVK FT HFNPKDSSLAFALFEYAAIPGTIFVGWLSDKVFNGRRAPVGVFCMIGVTIATYVYWKSN FT SILAINCALSSIGALIYGPVMLIGVSALDLVPKKAAGTAAGFTGLFGYMGGQVLAEVAM FT GAVVDKFSWNGGFILLMISSVLAIVFLSFTWNTHDRSEKGPDKVAV" FT misc_feature order(1180657..1180710,1180768..1180836,1180855..1180908, FT 1180921..1180989,1181050..1181118,1181128..1181187, FT 1181323..1181391,1181434..1181502,1181527..1181583, FT 1181596..1181664,1181698..1181766,1181794..1181862) FT /note="12 probable transmembrane helices predicted for FT CBO1071 by TMHMM2.0 at aa 29-46, 66-88, 95-112, FT 117-139,160-182, 186-205, 251-273, 288-310, 319-337, FT 342-364,376-398 and 408-430" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1180657..1181904 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -88.7, E-value 0.00048" FT /inference="protein motif:Pfam:PF00083" FT misc_feature 1181020..1181070 FT /note="PS00942 glpT family of transporters signature." FT /inference="protein motif:ProSite:PS00942" FT misc_binding 1182001..1182333 FT /gene="argS" FT /locus_tag="CBO1072" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 1182492..1184183 FT /transl_table=11 FT /gene="argS" FT /locus_tag="CBO1072" FT /product="arginyl-tRNA synthetase" FT /EC_number="6.1.1.19" FT /db_xref="GOA:A5I0R5" FT /db_xref="InterPro:IPR001278" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR005148" FT /db_xref="InterPro:IPR008909" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015945" FT /db_xref="UniProtKB/Swiss-Prot:A5I0R5" FT /protein_id="CAL82626.1" FT /translation="MDYKNLVAERIKENTELEVDLIEKLIEIPPKKEMGDYAFPCFQLA FT KTFRKAPNLIAEELKEKINKEGFEKVVTVGPYLNFFVDKTILIKDVLEKVLSEKEKYGS FT SKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWGTQ FT FGKLISAYRRWVDEEALEKDAIGELLRIYVKFHGEAEKDPELEKEARLNFKRLEEGSEE FT ETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGESFYSDKMDAVVQEIDDKGLLVDSNGA FT KVVMLDEYNMPPCMIKKSDGATIYATRDLAAAIYRKKTYDFHKCIYVVGTPQALHFKQV FT FTTLKLMGHDWADDCKHVGFGLVKLANKKLSTRNGDVVFLEDLLNQSVEETLKIINEKN FT PNLKNKGDVAKKLGIGAVVFTYLKNNRERDIVFDWKEILSFDGETGPYVEYSYARGKSI FT LRKAGELTGEADYSKLSSKEEFELAKLLGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFN FT KFYNAHGILNAEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM" FT misc_feature 1182492..1182737 FT /note="Pfam match to entry PF03485 N-Arg, Arginyl tRNA FT synthetase N terminal domain, score 96.6, E-value 5.1e-26" FT /inference="protein motif:Pfam:PF03485" FT misc_feature 1182762..1183793 FT /note="Pfam match to entry PF00750 tRNA-synt_1d, tRNA FT synthetases class I (R), score 331.6, E-value 9.4e-97" FT /inference="protein motif:Pfam:PF00750" FT misc_feature 1182849..1182884 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature 1183833..1184180 FT /note="Pfam match to entry PF05746 tRNA-synt_1d_C, Arginyl FT tRNA synthetase anticodon binding domain, score FT 156.8,E-value 4e-44" FT /inference="protein motif:Pfam:PF05746" FT repeat_region 1184362..1184547 FT /note="intergenic repeat 1" FT CDS 1184628..1185758 FT /transl_table=11 FT /gene="arcT" FT /locus_tag="CBO1073" FT /product="putative arginine aminotransferase" FT /db_xref="GOA:A5I0R6" FT /db_xref="InterPro:IPR001176" FT /db_xref="InterPro:IPR004838" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5I0R6" FT /protein_id="CAL82627.1" FT /translation="MKIKTFKVEQWMNQYENDAIYNLAETCIDSLTLRELLNLAGKNFE FT EYMASLGDIRMTYSHIYGSPSLLKGIASLFQHVKEEQIIPTHGAIGANHQVLITLLEPG FT DRMVSVAPTYQQHYSIPESINAEVKILNLLPENNFLPDLQELKKMVNSNTKLITINNPN FT NPSGSLIPVELLKQIADIAKSVDAYVLSDEVYRGISEDGSYMPSIVDFYEKGISVGSMS FT KTFSLAGLRLGWIVSKDEKIINLCKGRRDYDTISCGVLDDIFASLALENKDAILERNRK FT IVMTNRDLLHQWVSSEPRVSYVKPVAGNTALIYYDVDMHSYEFCEKLLKETGVFYTPGE FT CFDLDYCFRIGYAFDSKTLMKGLKKTSEFISSLPSR" FT misc_feature 1184823..1185737 FT /note="Pfam match to entry PF00155 FT aminotran_1_2,Aminotransferase class I and II, score 78.4, FT E-value 1.6e-20" FT /inference="protein motif:Pfam:PF00155" FT misc_feature 1185285..1185326 FT /note="PS00105 Aminotransferases class-I FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00105" FT CDS 1185897..1186277 FT /transl_table=11 FT /locus_tag="CBO1074" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR000644" FT /db_xref="UniProtKB/TrEMBL:A5I0R7" FT /protein_id="CAL82628.1" FT /translation="MLCDIMNTHVIVLNPKDSIKKALNLMNENNINGAPVADEEGNLIG FT MIVKADIYRFLMEEGHYDTCPVEWVMTKEVFTASEEEDVISIAKKILDKDIIAMPIVDS FT SKKLLGIVSVEDILKSLIYKLK" FT misc_feature 1185906..1186067 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 61.4, E-value 2e-15" FT /inference="protein motif:Pfam:PF00571" FT misc_feature 1186101..1186262 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 44.0, E-value 3.5e-10" FT /inference="protein motif:Pfam:PF00571" FT CDS complement(1186334..1186558) FT /transl_table=11 FT /locus_tag="CBO1075" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0R8" FT /protein_id="CAL82629.1" FT /translation="MIVHHAHQAVLVAIKKKKQIKTKFKITKNNIFKIRESNFIKHKFN FT SRILKMLTQNIFNFNIAKIKKHLMNFLAK" FT repeat_region 1186361..1186393 FT CDS complement(1186669..1188432) FT /transl_table=11 FT /gene="feoB" FT /locus_tag="CBO1076" FT /product="ferrous iron transport protein B" FT /db_xref="GOA:A5I0R9" FT /db_xref="InterPro:IPR003373" FT /db_xref="InterPro:IPR011619" FT /db_xref="InterPro:IPR011640" FT /db_xref="InterPro:IPR011642" FT /db_xref="UniProtKB/TrEMBL:A5I0R9" FT /protein_id="CAL82630.1" FT /translation="MITTALLGNPNVGKTSLFNQLTGSNQYVGNWAGVTVEKKEGFVND FT SIKIVDLPGIYAMDTFSNEEKVSKNFLINGNVDVIIDIVDASNLDRNLYLTTQLKQFNK FT PIILVLNMIDVAENKGIKINYDILSKELNVKVIPIIASKGIGIDKLIETLENKTFLNYK FT DDNDYNFESERDAYKFIGNIIEKAVTLEYKKSISNTDKIDKIVLNPVLAYPLFLGILYI FT IFKFTFNWVGTPLADYIDTLLNDSLIPYLGTLLESTAPWFKSLLLDGIVAGVGSVIVFL FT PVILTLFLGISFLEDSGYMARAAFIMDKLMRKMGLSGKAFIPMVVGFGCSVPGIMSART FT LESERDRKLTALLVPLMSCNARLPVYALFASVFFSGHETSIVFSLYILGILLAFIIGLL FT FKNTLFKKDEEPFIIELPEYKMPEFKNLMLHTWDKGKGFLKKAGTIIFSISVIVWLLSN FT FNFSGMVDINESFLASLGRVLSPIFKPLGFSGWQTSVSLLTGLMAKEVIVGTMGVIYGG FT DLKVTLLNHFTPLSAYSFLVFVLLYTPCVSVVATMRKEYGSRMALFSVTYQIILAWIIS FT FLIYNVGALII" FT misc_feature complement(order(1186681..1186749,1186786..1186854, FT 1186882..1186950,1187050..1187109,1187233..1187292, FT 1187311..1187379,1187422..1187490,1187551..1187619, FT 1187761..1187820)) FT /note="9 probable transmembrane helices predicted for FT CBO1076 by TMHMM2.0 at aa 205-224, 272-294, FT 315-337,352-374, 381-400, 442-461, 495-517, 527-549 and FT 562-584" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1186684..1188417) FT /note="Pfam match to entry PF02421 FeoB, Ferrous iron FT transport protein B, score 863.9, E-value 5.2e-257" FT /inference="protein motif:Pfam:PF02421" FT misc_feature complement(1188388..1188411) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1188447..1188668) FT /transl_table=11 FT /gene="feoA" FT /locus_tag="CBO1077" FT /product="ferrous iron transport protein A" FT /db_xref="GOA:A5I0S0" FT /db_xref="InterPro:IPR007167" FT /db_xref="UniProtKB/TrEMBL:A5I0S0" FT /protein_id="CAL82631.1" FT /translation="MSICELLPGQTAKISSISGNEKLVKRLMALGCIEGTEISLKKRAP FT LGDPILINLRGFDLAIRKKDAKFISVYE" FT misc_feature complement(1188450..1188668) FT /note="Pfam match to entry PF04023 FeoA, FeoA family,score FT 68.9, E-value 1.2e-17" FT /inference="protein motif:Pfam:PF04023" FT CDS 1188994..1189389 FT /transl_table=11 FT /locus_tag="CBO1078" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0S1" FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/TrEMBL:A5I0S1" FT /protein_id="CAL82632.1" FT /translation="MRKKQNIYKSSEYIYVKDDEKRKAKRKECNIYIHYPRVNNKSIYE FT NYGEDLAKMEVIDISKFGVKLRTKIKLKEDDFINFSLRLSEKPSFWCMAIVRRVEKYED FT YFIIGCEFLSLTLEQMRDIEKYVLSIR" FT CDS 1189602..1190327 FT /transl_table=11 FT /locus_tag="CBO1079" FT /product="putative phosphoserine phosphatase" FT /db_xref="GOA:A5I0S2" FT /db_xref="InterPro:IPR006383" FT /db_xref="InterPro:IPR006385" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:A5I0S2" FT /protein_id="CAL82633.1" FT /translation="MNIAAFFDIDGTLYREGLITEVFKKLVKYDIIESERWYNEVRPEY FT VKWDKRQGNYDNYLLKMAGIYIEAIKGLHKSQIEFIAKKVVEQKGDRVYTFTRDSIKWH FT KEQGHKIITISGSPYELVKEMASKYGFDDFRGAQYVLDKESIYTGDVIPMWDSDSKRKA FT INELVEKYNIDLKKSYAYGDTSGDFSMFKMVENPICVNPTKELVQKVVEDEEVKEKTKI FT IVERKDMVYKLTPDCINLW" FT misc_feature 1189605..1190213 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 5.9, E-value 0.0093" FT /inference="protein motif:Pfam:PF00702" FT CDS 1190575..1190709 FT /transl_table=11 FT /locus_tag="CBO1080" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0S3" FT /protein_id="CAL82634.1" FT /translation="MSKMLIFYEKLKLIIKSIKVCIIINELSGVNVISQMINNTPNSS" FT CDS 1190771..1192363 FT /transl_table=11 FT /locus_tag="CBO1081" FT /product="putative chitinase" FT /db_xref="GOA:A5I0S4" FT /db_xref="InterPro:IPR003610" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:A5I0S4" FT /protein_id="CAL82635.1" FT /translation="MKSKKLTALVLSVLVASGATSAILTEKNIVQAKEVKISSVQSKIA FT TNIGIGEESWGSTVFAPYVDACSYPVFSLTEYAKETGTKHFILGFIVDKNGQPSWGTYY FT DMEEGPTDYQGGGLLKEIKALRQMGGDVMVSFGGEANTPLAASIKDVNKLKDAYKKVIK FT DYGLTHIDFDIEGAWTADAASIERRSQAIALLQKELKAENHPLKIWYTLPVLPSGMTNG FT VDVVKSAVKNGVELSGVNVMTMCFGQKAPDGTMGDLVVESAKSVHKQLKDIYTQANIQK FT SDKEIWKMIGVTPMNGLDYSGSILDQNGARKVASFGKTVGMGLIGMWSVNRDYQNPKGS FT TNYVSITDSSILQEKFEFGKILSNYDSNDGSGIIEKPGTTDPENPGDGEGGGEVEGVPA FT YKPQQEYSAGDKVSYKGKIYQAKWWTKGFAPDTAVQNSWDTPWELIGNSDDGKDVEDGK FT DVEDGKDVEDGKDIEDGGEVGSAPAYNLQQEYWGGDKVSYKGKVYQAKWWTKGFAPDTV FT VENTWDTPWALIG" FT sig_peptide 1190771..1190864 FT /locus_tag="CBO1081" FT /note="probabilty 1.000, with cleavage site probability FT 0.966 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1190939..1191769 FT /note="Pfam match to entry PF00704 Glyco_hydro_18,Glycosyl FT hydrolases family 18, score -26.4, E-value 0.0039" FT /inference="protein motif:Pfam:PF00704" FT misc_feature 1191959..1192084 FT /note="Pfam match to entry PF02839 CBM_5_12, Carbohydrate FT binding domain, score 47.9, E-value 2.4e-11" FT /inference="protein motif:Pfam:PF02839" FT misc_feature 1192211..1192348 FT /note="Pfam match to entry PF02839 CBM_5_12, Carbohydrate FT binding domain, score 36.9, E-value 4.8e-08" FT /inference="protein motif:Pfam:PF02839" FT CDS join(1192640..1192738,1192742..1193242) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO1082" FT /product="putative acetyltransferase (pseudogene)" FT /note="Pseudogene. This CDS appears to contain an in-frame FT TGA stop codon." FT /db_xref="PSEUDO:CAL82636.1" FT /inference="protein motif:ProSite:Pseudog" FT misc_feature 1192826..1193179 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 51.2, FT E-value 2.4e-12" FT /inference="protein motif:Pfam:PF00583" FT misc_binding 1193313..1193415 FT /gene="metN1" FT /locus_tag="CBO1084" FT /bound_moiety="S-adenosyl methionine" FT /note="S_box leader" FT CDS 1193520..1194476 FT /transl_table=11 FT /gene="metN1" FT /locus_tag="CBO1084" FT /product="putative D-methionine ABC transporter,ATP-binding FT protein" FT /db_xref="GOA:A5I0S6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017908" FT /db_xref="InterPro:IPR018449" FT /db_xref="UniProtKB/TrEMBL:A5I0S6" FT /protein_id="CAL82637.1" FT /translation="MIEVSNLKKIIKDKVILEDINLSIEKGEVFGIVGHSGAGKSTLLR FT CLNVLESYDKGSVKINGEKIDELSKKQLRILRKDLGMIFQSFNLLKRKNVFQNIALPLE FT IWGMSKNEINNKVKKLLKLVDLEDKAYAKLHNLSGGQKQRVAIARALALEPKILLCDEA FT TSALDPKTTKDILNLLKDINEKLGITIVIVTHQMEVIKEICERVAIMDKGKIKSLGFSE FT ELFLSPDKHLKKLLGENEVLPKEGVNIKIFFTKELSNESIITTMARELDIDISIVWGKL FT EKFRENVLGNLVINVSKENKEKICDYLSLKSIVWEVQ" FT misc_feature 1193598..1194158 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 244.6, E-value 1.4e-70" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1193619..1193642 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1193928..1193972 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1194478..1195119 FT /transl_table=11 FT /gene="metI1" FT /locus_tag="CBO1085" FT /product="putative D-methionine ABC transporter, permease FT protein" FT /db_xref="GOA:A5I0S7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I0S7" FT /protein_id="CAL82638.1" FT /translation="MLQDMLFKALKETLYMVSISTILSISLGFIPSIILIITDEKGLKP FT NKVIYKSLDFVVNLLRSFPFIILMVAILPFTKAIVGKTIGTTAAIVPLTIAAIPFATRV FT LESAMKEVDEGVIEAAKSLGASDIQIIFKVIIKESMPSMIVAITLTIISVVAYSAMAGA FT IGGGGLGDVAIKYGYYRFKTDIMIYTVVILIILVQVIQSLGNILYKRLDK" FT misc_feature 1194493..1195116 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 72.2, E-value 1.1e-18" FT /inference="protein motif:Pfam:PF00528" FT misc_feature order(1194520..1194588,1194646..1194714,1194724..1194792, FT 1194904..1194972,1195030..1195098) FT /note="5 probable transmembrane helices predicted for FT CBO1085 by TMHMM2.0 at aa 15-37, 57-79, 83-105, 143-165 and FT 185-207" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1194802..1194888 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 1195174..1195986 FT /transl_table=11 FT /gene="metQ1" FT /locus_tag="CBO1086" FT /product="D-methionine-binding lipoprotein" FT /db_xref="InterPro:IPR004872" FT /db_xref="UniProtKB/TrEMBL:A5I0S8" FT /protein_id="CAL82639.1" FT /translation="MNKKRLLGITLSVFLTLGVVGCSSKESKETVNDKKTIVVGATPVP FT AGEILKVAQPLLEKKGYKLEIKEFTDYVTPNTALNDREIDANFFQHTPYLDNFNVEKKT FT ELEAVKKIYISPLALYSNKTKKLEGLKDGATIAVPNDPTNETRALRLLEKSGLIKLKKG FT DTLTKGDIAENKKNIKIEEIDAPQLPRILNDVDAVVINTNYAIEAKLNPLKDSILIEDK FT DSPYANVIAVKKEDKDKAHIKALSEALTSKEVKDFINEKYKGVVIPTF" FT sig_peptide 1195174..1195255 FT /gene="metQ1" FT /locus_tag="CBO1086" FT /note="probabilty 1.000, with cleavage site probability FT 0.522 between residues 28 and 29" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1195207..1195239 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1195282..1195983 FT /note="Pfam match to entry PF03180 Lipoprotein_9, NLPA FT lipoprotein, score 451.5, E-value 7.6e-133" FT /inference="protein motif:Pfam:PF03180" FT CDS 1196175..1196987 FT /transl_table=11 FT /gene="metQ2" FT /locus_tag="CBO1087" FT /product="D-methionine-binding lipoprotein" FT /db_xref="InterPro:IPR004872" FT /db_xref="UniProtKB/TrEMBL:A5I0S9" FT /protein_id="CAL82640.1" FT /translation="MKKKILSIAIATTLILGLVALTGCGSSKEEAKEKKTIVVGATPEP FT HAEILKKVKPILEKKGYTLEIKEFTDYVTPNTALQDGEIDANFYQHIPYLEEFNKEKKT FT DLSYTVKVHLEPMGVYSKTIKDLKELKNGATISIPSDPTNGSRALKLLEKEGIIKLKEG FT ELVSKMDITKNPKNIKIEELDAAQLPRTLGDVDAAVINTNYAVPANLNPLKDALAIESK FT DSPYANVIVVKTENKNAEYIKALDEAINSEEIKKYIEEQYKGAILPAF" FT sig_peptide 1196175..1196265 FT /gene="metQ2" FT /locus_tag="CBO1087" FT /note="probabilty 1.000, with cleavage site probability FT 0.895 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1196187..1196255 FT /note="1 probable transmembrane helix predicted for CBO1087 FT by TMHMM2.0 at aa 5-27" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1196214..1196246 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1196283..1196984 FT /note="Pfam match to entry PF03180 Lipoprotein_9, NLPA FT lipoprotein, score 478.6, E-value 5.2e-141" FT /inference="protein motif:Pfam:PF03180" FT CDS 1197215..1198381 FT /transl_table=11 FT /locus_tag="CBO1088" FT /product="putative carboxypeptidase" FT /db_xref="GOA:A5I0T0" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="InterPro:IPR017439" FT /db_xref="UniProtKB/TrEMBL:A5I0T0" FT /protein_id="CAL82641.1" FT /translation="MDIINKIADEYENYVIDLRRYFHSCPECSWDEKNTSKKIKSELNK FT FDIPFQSIANTGILVNIKGKETGKTVLLRADMDAIQINECNNFDYVSKNKGIMHACGHD FT GHMAMLLGAAIGLNNIKDKIKGNIKLLFQPAEEVGEGAAMCIKEGVLDSVDNAFSIHLW FT SNVPYGMVAIEEGPIMPSADVFKIKIKGKGGHGAMPHETIDSVLAASSFVMSLQSIVSR FT EVDPTEPLVISIGKLQAGSRFNVIANEAIIEGTSRYFNMSFREKLPNIIERILKNSTGV FT YNAKGELSYKFATPVTINDERSVYRAKQVINKILGEDKIYKMNKNMVTEDFGYYLEKVP FT GALAFLGVGNETLGSNYPQHHEKYNIDERALKIGVKLYCEYALDFLNC" FT misc_feature 1197248..1198369 FT /note="Pfam match to entry PF01546 Peptidase_M20,Peptidase FT family M20/M25/M40, score 293.5, E-value 2.8e-85" FT /inference="protein motif:Pfam:PF01546" FT CDS 1198646..1198762 FT /transl_table=11 FT /locus_tag="CBO1089" FT /product="hypothetical protein (putative phage related FT protein)" FT /note="Similar to N-terminal region of Pediococcus FT pentosaceus OrfQ and to the C-terminal region of FT Pseudomonas phage phiKZ" FT /db_xref="UniProtKB/TrEMBL:A5I0T1" FT /protein_id="CAL82642.1" FT /translation="MVYEVYFFIFAPLKLNLFKEYFHMHEIAFKKITKDEII" FT CDS 1198932..1199582 FT /transl_table=11 FT /locus_tag="CBO1090" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0T2" FT /protein_id="CAL82643.1" FT /translation="MITRRNEMKLCNFSDENELIFNENKELYKKSIFFDLEHYVYRKPV FT CVGVFGCCYYDSIKNAIEVTQYMIEGKKDVKNILKLAKEYFENAYRTGEKKYIITFSGN FT NDFTVINYLFEKYDVDFDIKEYFQSIDLQREYEKEKKSSIGLKNLEKEFNIIREEKELI FT SGQNLAKTFSKIIKDDDYINRMPEYKKKKILLYNEQDVVSLFHIYTTWNKFIN" FT CDS 1200088..1200780 FT /transl_table=11 FT /locus_tag="CBO1091" FT /product="GntR-family transcriptional regulator" FT /db_xref="GOA:A5I0T3" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011711" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0T3" FT /protein_id="CAL82644.1" FT /translation="MFMPIKNAKVYEQVIEQIKTMIISGNLQKGDKLPSERELVDQLKV FT SRTSIREALRALEIVGLIKCKQGEGNFIRDNFDNSLFEPLSLVFMLERSNKEDIIEVRR FT IIEVEAAALAAKRITKDQLKKLEYIIYEFKNSEDEKILVNLDKNFHYEIAQASNNFILL FT NIINSCSTLIDSLIKNARYKIMKNVENKKELVDQHEKIYLALKEKDSELASKLMKEHLE FT FSGKFLEV" FT misc_feature 1200115..1200306 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 85.9, E-value FT 8.3e-23" FT /inference="protein motif:Pfam:PF00392" FT misc_feature 1200184..1200258 FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT /inference="protein motif:ProSite:PS00043" FT misc_feature 1200187..1200252 FT /note="Predicted helix-turn-helix motif with score 987.000, FT SD 2.55 at aa 34-55, sequence PSERELVDQLKVSRTSIREALR" FT CDS 1201025..1201888 FT /transl_table=11 FT /locus_tag="CBO1092" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR003740" FT /db_xref="InterPro:IPR019264" FT /db_xref="UniProtKB/TrEMBL:A5I0T4" FT /protein_id="CAL82645.1" FT /translation="MGFKALDKYIIKDIVMVIIGSLIAALGINMFLIHANLLSGGLSGI FT TLIIQYVTGFPAAYSLLILNIPLFFLSYKKVNKKFTFLSLIGTIALSVGLILTEPLKNT FT IQVNDILLLGLYGGVLNGIGVGIVFSNHGSTGGLDIVSALIKKKYGNFDIGTITFIVNF FT IIVSISACIFGLTSALYTLVSMYIASYLVDKVIKGFNRQKLILIITEKEEDVSKVLMNE FT LNRGVTFLYAKGAYTKKDKKVLYCVVSLSQLPKLKLIVKDIDEGAFISILDASEVEGRG FT FKKASL" FT misc_feature 1201061..1201309 FT /note="Pfam match to entry PF02588 DUF161, Uncharacterized FT BCR, YitT family COG1284, score 95.4, E-value 1.2e-25" FT /inference="protein motif:Pfam:PF02588" FT misc_feature order(1201067..1201135,1201154..1201222,1201265..1201318, FT 1201352..1201411,1201484..1201552) FT /note="5 probable transmembrane helices predicted for FT CBO1092 by TMHMM2.0 at aa 15-37, 44-66, 81-98, 110-129 and FT 154-176" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1201352..1201600 FT /note="Pfam match to entry PF02588 DUF161, Uncharacterized FT BCR, YitT family COG1284, score 78.1, E-value 1.9e-20" FT /inference="protein motif:Pfam:PF02588" FT CDS 1202097..1202309 FT /transl_table=11 FT /locus_tag="CBO1093" FT /product="putative exported protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0T5" FT /protein_id="CAL82646.1" FT /translation="MGSLKLISSFLITIMLLIPFTNKGLNENKIVKNINNLVLIEEKED FT DSNKIKKRVKLRPEKEVNNIYINKI" FT sig_peptide 1202097..1202172 FT /locus_tag="CBO1093" FT /note="probabilty 0.637, with cleavage site probability FT 0.509 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT repeat_region 1202434..1202466 FT /rpt_family="CB.402" FT /rpt_type=INVERTED FT /rpt_unit_seq="aaaaaaataaaaaaaataaaaaaaataaaaaaa" FT /inference="ab initio prediction:REPuter" FT CDS complement(1202550..1204007) FT /transl_table=11 FT /gene="gltX" FT /locus_tag="CBO1094" FT /product="glutamyl-tRNA synthetase" FT /EC_number="6.1.1.17" FT /db_xref="GOA:A5I0T6" FT /db_xref="InterPro:IPR000924" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR004527" FT /db_xref="InterPro:IPR008925" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020058" FT /db_xref="InterPro:IPR020061" FT /db_xref="InterPro:IPR020751" FT /db_xref="UniProtKB/Swiss-Prot:A5I0T6" FT /protein_id="CAL82647.1" FT /translation="MTNKVRTRFAPSPTGYMHVGNLRTALYAYLIAKHDNGDFILRIED FT TDQERLVEGALDVIYNTLKITGLSHDEGPDIGGPVGPYVQSERRNIYIEYAEKLIEKGE FT AYYCFCSKERLDMLRANSEALKRPFRYDKHCIDLSKEEIDKKIAEGVPYVIRQKNPTTG FT STSFHDEIYGDISVDNSELDDMILIKSDGLPTYNFANVVDDHLMGITHVVRGSEYLSSS FT PKYNRLYEAFGWDVPIYVHCPPIMKDEHHKLSKRNGDASFEDLMAKGYLKEAILNYIAL FT LGWNPGGEKEVFSMEELIEAFNYRNINKAPAVFDTKKLKWMNGEYIRALSLDKFHEMAL FT PYYEEALTRDLDTKKISELLHTRVEVLNEIPEQLDFFNNLLEYSPEMYIHKKMKTTYEN FT SLKSLEEVLPKLEALENWTFENIKEVCMNLVKELEVKNGVVLWPIRTAVSGKQFTPGGA FT FEIADILGKEETLERIKIGIDKLKALQ" FT misc_feature complement(1203045..1203998) FT /note="Pfam match to entry PF00749 tRNA-synt_1c, tRNA FT synthetases class I (E and Q), catalytic domain, score FT 482.7, E-value 3e-142" FT /inference="protein motif:Pfam:PF00749" FT misc_feature complement(1203942..1203977) FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT CDS 1204432..1205448 FT /transl_table=11 FT /gene="gapA2" FT /gene_synonym="gap2" FT /locus_tag="CBO1095" FT /product="glyceraldehyde 3-phosphate dehydrogenase A" FT /EC_number="1.2.1.12" FT /note="Also similar to CBO0226 (66.26 38d)" FT /db_xref="GOA:A5I0T7" FT /db_xref="InterPro:IPR006424" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020828" FT /db_xref="InterPro:IPR020829" FT /db_xref="InterPro:IPR020830" FT /db_xref="InterPro:IPR020831" FT /db_xref="UniProtKB/TrEMBL:A5I0T7" FT /protein_id="CAL82648.1" FT /translation="MGIKVGLNGFGRIGRAVLRIAQDKFPEDVEIVALNARATTETLVH FT LFKYDSCYGRFNGQVEIISNDNMKVNGKEIKIFRENDPQNLPWKELGVDIVIESTGIFK FT DREKAMKHIEAGAKKVIITAPGKNEDITIVLGVNENEYNPEEHNIISNASCTTNCLAPF FT AKVLDDNFGIVRGLMTTVHSYTNDQRILDKTHKDLRRARAAGESIIPTTTGAAKAVAKV FT LPSLKGKLNGFALRVPTPTVSLTDLVCELKTKVTAEEINAAFKKAADGEMKGVLGYSEE FT PLVSVDYKGDPRSSIVDGLSTMVLEDDMVKVVSWYDNEWGYSCRTVDLVNYVAKFMK" FT misc_feature 1204438..1204896 FT /note="Pfam match to entry PF00044 gpdh, Glyceraldehyde FT 3-phosphate dehydrogenase, NAD binding domain, score 295.4, FT E-value 7.1e-86" FT /inference="protein motif:Pfam:PF00044" FT misc_feature 1204888..1204911 FT /note="PS00071 Glyceraldehyde 3-phosphate dehydrogenase FT active site." FT /inference="protein motif:ProSite:PS00071" FT misc_feature 1204897..1205379 FT /note="Pfam match to entry PF02800 gpdh_C, Glyceraldehyde FT 3-phosphate dehydrogenase, C-terminal domain, score FT 389.1,E-value 4.7e-114" FT /inference="protein motif:Pfam:PF02800" FT CDS complement(1205693..1207201) FT /transl_table=11 FT /locus_tag="CBO1096" FT /product="putative metallo-beta-lactamase superfamily FT protein" FT /db_xref="GOA:A5I0T8" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR011108" FT /db_xref="InterPro:IPR022712" FT /db_xref="UniProtKB/TrEMBL:A5I0T8" FT /protein_id="CAL82649.1" FT /translation="MEIKFLGAASCVTGSCHLLKIKDKNILLDCGAYQGKDDEGDRNFS FT FKFDIKDIDCVILSHAHIDHSGRIPFLYKLGYRGKVISTKATADLCSIMLPDSGHILES FT EVEWKNRKRIRSGLPPIEPLYNLKTAQMSTSLFEGYNYDEYIEIFSNLKIRFLDSGHLL FT GSAITELYITENDKEFKIVYSGDLGNTNLPILKDPVQVDYADYVLMETTYGNRLHDNIN FT SQLKQLIHIVKDTFKRRGNVIIPSFAVGRTQEVIYALNKYVESNILKNIKVYVDSPLAS FT EATKIFNEYTTDFDEDAQKLLKEGDNPLEFNGLYFTNSPQESMELNKIKTGAIIISASG FT MCEAGRIRHHLKHNLWRKECSIVFVGYQAEGTLGQKILSGAKKIKLFGEEIAVNAEIYN FT LPSLSGHADKNGLLNWLENFKEKPKEVILIHGEKASRDYFKNLLTEKNYNTFCPNIGDI FT YSSEFKGQRKSVVKNKITNLLNSLEDIDSLNKEDLLNLIKKEIY" FT misc_feature complement(1206461..1207165) FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 64.2, FT E-value 2.9e-16" FT /inference="protein motif:Pfam:PF00753" FT misc_feature complement(1207154..1207186) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1207519..1207716 FT /transl_table=11 FT /locus_tag="CBO1097" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0T9" FT /protein_id="CAL82650.1" FT /translation="MFLQIVKYIGFKGVINMFQFIKHKLRKALDEKFVLSAYLLAIVFL FT FIVSLVYDLGKKIGLFIMML" FT misc_feature 1207615..1207683 FT /note="1 probable transmembrane helix predicted for CBO1097 FT by TMHMM2.0 at aa 33-55" FT /inference="protein motif:TMHMM:2.0" FT CDS 1207859..1208503 FT /transl_table=11 FT /locus_tag="CBO1098" FT /product="putative metal dependent phosphohydrolase" FT /db_xref="GOA:A5I0U0" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR006675" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:A5I0U0" FT /protein_id="CAL82651.1" FT /translation="MNTRDEINKDIQKVFKDIDEHILKDEKPSNYINKLYEEGKLEEYP FT FDMLTILRRIDQSPKYHPEGSVWNHIMMVLDNGAKERDKSENERIFMWACLLHDIGKGT FT TTKIRKGRITSYNHDKEGERLSIKFLKCFTEDEEFIKEVSKLVRWHMQPLFVNKNLPFK FT DIESMVKEVSIKEIALISLCDRLGRGGMSEGKKEEEIKAIDLFIEKCSNYM" FT misc_feature 1208057..1208425 FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 41.1, E-value 2.6e-09" FT /inference="protein motif:Pfam:PF01966" FT CDS 1208559..1209929 FT /transl_table=11 FT /gene="aldH" FT /locus_tag="CBO1099" FT /product="aldehyde dehydrogenase" FT /EC_number="1.2.1.3" FT /db_xref="GOA:A5I0U1" FT /db_xref="InterPro:IPR012394" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR016163" FT /db_xref="UniProtKB/TrEMBL:A5I0U1" FT /protein_id="CAL82652.1" FT /translation="MENIRNILEKQKSFFDKGYTKDINFRIEALKKLKHNIKINENNIF FT KALKIDLNKSEFETFITEIGIVYDEINGAIKNIKKWSKPKKVKTPITNFLASSYIYNEP FT YGVALIMSPWNYPFQLIMAPLVGAISAGNCVLLKPSELAIETEKIIVKIIKDTFSDEYI FT GVITGGIEESTALLKEKFDYIFYTGGINVGKIVMRAAAEHLTPITLELGGKSPCIVDKD FT ANIDLAARRIAWGKFLNAGQTCVAPDYLVVHRNIKEKLISSIENYIIEFFGENTFESED FT YPRIINERHFKRLEGYLKEGKIVSGGNTDINNLYIEPTIIEGINFENRIMEEEIFGPVF FT PVIEFENIDKVIEIVKNNPKPLALYYFSENKEKQEFIIKNISFGGGCINDTIMHLSTST FT LPFGGVGNSGIGGYHGRASFDTFSHKKSILKKSNLIDVKIRYAPFKGKINLAKRLFK" FT misc_feature 1208559..1209854 FT /note="Pfam match to entry PF00171 aldedh, Aldehyde FT dehydrogenase family, score 471.5, E-value 7e-139" FT /inference="protein motif:Pfam:PF00171" FT misc_feature 1209183..1209206 FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT /inference="protein motif:ProSite:PS00687" FT misc_feature 1209267..1209302 FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT /inference="protein motif:ProSite:PS00070" FT CDS complement(1210012..1211409) FT /transl_table=11 FT /locus_tag="CBO1100" FT /product="putative sodium:alanine symporter" FT /note="This CDS is also similar to CBO1101 (77.042 identity FT in 453 aa overlap)." FT /db_xref="GOA:A5I0U2" FT /db_xref="InterPro:IPR001463" FT /db_xref="UniProtKB/TrEMBL:A5I0U2" FT /protein_id="CAL82653.1" FT /translation="MQTFLDIISKISGWIWGPPMMILLVGGGIILTLTLGFIQFRYLPF FT ILKQTFGRIFDKPEGEGTITPFQAVSSALASSVGAANIIGVPVAIAFGGPGAIFWMWVT FT AIIGQATKFSEVVLGIKYREKNEKGEFVGGPVYYLKKGLKSPFLATMCSFAFMLEIIPS FT IATQSLSLCESAETIGIPKLATGIIVTILVALVVYGGIQRIGQVTEKLVPLMALAFICC FT SLVIVFINIKELPHAFGLIFKGAFTPMAAAGGFGGSVLAQSVRWGIARGAYSNEAGMGS FT APIAHSAAVTDHPVRQGFWGVFEVIVDTILICTMTALVILTSGIWEKLPASQAASMPAL FT AFQSVFGKSAGGAIVSFSLLLFVLSTIIVIVFYCEKQAEALFNPTFGKIIRFICLGAII FT YGSFGNLESLFAILDFLLALVVIPNMIGVLAMRKEVKELKIAFFSDPKYYPPAGKKMNN FT KNNEKAC" FT misc_feature complement(1210066..1211271) FT /note="Pfam match to entry PF01235 FT Na_Ala_symp,Sodium:alanine symporter family, score 333.4, FT E-value 2.6e-97" FT /inference="protein motif:Pfam:PF01235" FT misc_feature complement(order(1210120..1210188,1210201..1210269, FT 1210288..1210356,1210447..1210515,1210627..1210695, FT 1210723..1210779,1210813..1210881,1210909..1210977, FT 1211101..1211169,1211305..1211373)) FT /note="10 probable transmembrane helices predicted for FT CBO1100 by TMHMM2.0 at aa 13-35, 81-103, 145-167, FT 177-199,211-229, 239-261, 299-321, 352-374, 381-403 and FT 408-430" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1211086..1211133) FT /note="PS00873 Sodium:alanine symporter family signature." FT /inference="protein motif:ProSite:PS00873" FT CDS complement(1212006..1213382) FT /transl_table=11 FT /locus_tag="CBO1101" FT /product="putative sodium:alanine symporter" FT /note="This CDS is also similar to CBO1100 (77.042 identity FT in 453 aa overlap)." FT /db_xref="GOA:A5I0U3" FT /db_xref="InterPro:IPR001463" FT /db_xref="UniProtKB/TrEMBL:A5I0U3" FT /protein_id="CAL82654.1" FT /translation="MEAFMNFISKISNWIWGPPMLILLVGGGIILTFTLNFFQIRYFPY FT IMKETFGKMFSKPAEGEGTITPFQAACSALASTVGAANIIGVPVAIAFGGPGAVFWMWV FT VAILGQATKFSEIILGIKYREKNEEGNYVGGPVYYLKKGLKSPFLATMCSFCFMIEIIP FT SISTQSLSVCQTAETIGLPKIVTAIIVTVLVALVVYGGIQRIGQVTEKMVPIMALIFII FT CSVIILLFNITKLPNAFALIFKGAFTPQAAVGGFGGATLAQALRWGTARGTYSNEAGMG FT SAPIAHSAAVTDHPVRQAFWGIFEIMVDTIIICTLTALVVITTGMWNTVPGSQAASMPS FT MAFQNVFGKALGGAIVSISLLLFVLSTIIVIVYYCEKQAEALFGLSFSRIIRVVCLAAI FT IYGAVGKLEFLFALLDILLALVVIPNMIGLIAMRNEIKELKEEFFSDPKYYPGAKTSKS FT " FT misc_feature complement(1212036..1213244) FT /note="Pfam match to entry PF01235 FT Na_Ala_symp,Sodium:alanine symporter family, score 357.7, FT E-value 1.3e-104" FT /inference="protein motif:Pfam:PF01235" FT misc_feature complement(order(1212090..1212158,1212171..1212239, FT 1212258..1212326,1212417..1212485,1212687..1212749, FT 1212777..1212845,1212882..1212941,1213068..1213136, FT 1213272..1213340)) FT /note="9 probable transmembrane helices predicted for FT CBO1101 by TMHMM2.0 at aa 15-37, 83-105, 148-167, FT 180-202,212-232, 300-322, 353-375, 382-404 and 409-431" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1213056..1213103) FT /note="PS00873 Sodium:alanine symporter family signature." FT /inference="protein motif:ProSite:PS00873" FT CDS 1213820..1214257 FT /transl_table=11 FT /locus_tag="CBO1102" FT /product="MarR-family transcriptional regulator" FT /db_xref="GOA:A5I0U4" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR023187" FT /db_xref="UniProtKB/TrEMBL:A5I0U4" FT /protein_id="CAL82655.1" FT /translation="MGKNTQCVGRYISMLYRASNCYINKELCKYGIGSGQYIFLLYVFN FT NNGCNQEEISTVLNIDKGTTARALQKLEKEGYINKEIDKNDRRINHIIITKKGSEIKNI FT IIKILNSWEKMLYSDFTEKEKKELLKLLEKASLNCHNYKAK" FT misc_feature 1213913..1214224 FT /note="Pfam match to entry PF01047 MarR, MarR family,score FT 74.2, E-value 2.8e-19" FT /inference="protein motif:Pfam:PF01047" FT CDS 1214275..1215642 FT /transl_table=11 FT /locus_tag="CBO1103" FT /product="putative drug/sodium antiporter" FT /db_xref="GOA:A5I0U5" FT /db_xref="InterPro:IPR002528" FT /db_xref="InterPro:IPR015522" FT /db_xref="UniProtKB/TrEMBL:A5I0U5" FT /protein_id="CAL82656.1" FT /translation="MDRQKQLGEESVKKLLLKFSAPAIMGMIVNALYNIIDRMYIGHIK FT DVGSLAITGVGLTLPIMTVLMAFSMLIGIGSASIISIRLGQKRKKDAEKILGNAFTLLC FT IIMISITIIGLIFVDPLLNIFGASAKTFYYAKEYVVIILIGSITNALGFGLNNSIRAEG FT NPKMAMVTMLLGAVLNLILDPIFIFGFNMGIKGAAIATVISQTANTIWVLRYFTGKKST FT LKLKRENFKVEKTIFLEIISIGMAPFALQLAASIITVISNNALKNTGGDLAIGAMTVIN FT SVSLMVLMPIFGINQGAQPIIGYNYGAEQYKRVKDTLKIAIFSATMVVTVGFLLVQIFP FT QYIIKIFNNDPKLMEIGISGLRIVLCMLPVIGFQIVSSNYFQAIGKAKVSVFLSLLRQV FT IILIPLLLILPNHFGLTGVWMCAPISDGISSIVTAIFIYREINKLGREKSYKVKFN" FT misc_feature order(1214329..1214397,1214455..1214523,1214560..1214628, FT 1214686..1214739,1214776..1214844,1214854..1214922, FT 1214980..1215048,1215091..1215159,1215232..1215291, FT 1215334..1215402,1215439..1215507,1215520..1215588) FT /note="12 probable transmembrane helices predicted for FT CBO1103 by TMHMM2.0 at aa 19-41, 61-83, 96-118, FT 138-155,168-190, 194-216, 236-258, 273-295, 320-339, FT 354-376,389-411 and 416-438" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1214338..1214829 FT /note="Pfam match to entry PF01554 MatE, MatE, score 100.4, FT E-value 3.6e-27" FT /inference="protein motif:Pfam:PF01554" FT misc_feature 1215013..1215495 FT /note="Pfam match to entry PF01554 MatE, MatE, score FT 79.9,E-value 5.6e-21" FT /inference="protein motif:Pfam:PF01554" FT CDS 1216061..1216606 FT /transl_table=11 FT /locus_tag="CBO1104" FT /product="putative exported protein" FT /note="No significant database matches." FT /db_xref="GOA:A5I0U6" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5I0U6" FT /protein_id="CAL82657.1" FT /translation="MNSHRKKYFLIFFISGLVLIFVSFISYNYGKNVVIKNFIKSGDVY FT INKKEYIKAIAIYEEVVKYDRNDTDKNMLKLAMSMQNSRKSYHDGMIYYNRKQYLKALK FT CFRQVMENDTIAFNKAQEKIKECTEKYIEDNLKNAEKSIHNLKYKEANEYLNNIFKLDK FT DNEEAKKLKDILNKKYFN" FT sig_peptide 1216061..1216139 FT /locus_tag="CBO1104" FT /note="probabilty 0.893, with cleavage site probability FT 0.396 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT CDS 1216705..1217682 FT /transl_table=11 FT /locus_tag="CBO1105" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR021352" FT /db_xref="UniProtKB/TrEMBL:A5I0U7" FT /protein_id="CAL82658.1" FT /translation="MSKPIIDTYISRFENKEKIFKYNLDLYQCKNINKLYYYTSISTLE FT NIISKKNIWLSNSKYLNDSTEINYTNNLIYDICEEYLDGNEEFDKFFKENIEILLHTID FT MELGDTYILSLTENKDSLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKNSIF FT LNEGEDFVWYFGEVIYNKEHQGNIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNI FT AYIATFFKDESFKEEQEHRLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGN FT LPVEKITIGPKNNLDIAEMGLRSFLESEGYYKITIKKSKIPLRY" FT CDS complement(1217984..1218091) FT /transl_table=11 FT /locus_tag="CBO1106" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0U8" FT /protein_id="CAL82659.1" FT /translation="MVNFTPSIQGTLIAKLVIRTLVKIYYIIFFSKDRF" FT misc_feature complement(1218005..1218064) FT /note="1 probable transmembrane helix predicted for CBO1106 FT by TMHMM2.0 at aa 10-29" FT /inference="protein motif:TMHMM:2.0" FT CDS 1218489..1219727 FT /transl_table=11 FT /locus_tag="CBO1107" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:A5I0U9" FT /protein_id="CAL82660.1" FT /translation="MKKFISIIVTFAMIFSLVACGNKKENKNEVDLKNKDWNSIVEKSK FT GTTVTFYGWGGSELTNKWIDNHLAKELKEKYNITLKRVPMDIDDILNKMLGEKQAGSDK FT GTIDVVWINGENFYTAKKNNLLYGPFSENLPNYKKYIDKDSNDVKYDFGKPVEAFEAPY FT GKAQFVMVYDEEKVTKVPKDHRELLEFVKANPGKFTYAAPPDFTGSAFVRNIIYDIVGY FT EKLMKIKPEKELIEKEIKPAIDYLKEIKPYLWNKGKTYPANIAMLDNMYADKQVINTMS FT YNPNSVTEKIDNGTFPKKTQVSLFKNGTIGNTHFVAIPFNSPNKEGAMVTINSILSFEM FT QKSKYDPKVWGDLPVFDNKKLSEEEKEEIEKIKVGSGSLPQSELLPHRLPELPAELVPI FT IEKIWQENIPGDK" FT sig_peptide 1218489..1218549 FT /locus_tag="CBO1107" FT /note="probabilty 0.993, with cleavage site probability FT 0.399 between residues 21 and 22" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1218516..1218548 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1219729..1220595 FT /transl_table=11 FT /gene="potB" FT /locus_tag="CBO1108" FT /product="putative polyamine transport system, permease FT protein" FT /db_xref="GOA:A5I0V0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I0V0" FT /protein_id="CAL82661.1" FT /translation="MKEKMKPYILLLPVTIIVVSILGVGIINCLSQSLGYFPTVGLNEI FT TLKYYKEVLTSREFVEALKFSLFTCTLSSLIAEFIGVVLAYIIFTHKKRSKILDIIYKI FT PIIIPHTVAVLLIINMLSQNGILARILYNLGLISSRNIFPNLIMDKWGIGIIITYVWKE FT IPFIILVIYAVLTNIDERMWHLSKTLGASKTQTFFYVIFPMLVPSILSSFIIIFAFSFG FT AFEVPYLLGPTTPKSLSVKAYIEYSNPDLTNRPYAMVINTILIVISTFLIILYRKSLDI FT FKKESKQ" FT misc_feature order(1219747..1219815,1219921..1219989,1220026..1220094, FT 1220185..1220253,1220314..1220382,1220494..1220553) FT /note="6 probable transmembrane helices predicted for FT CBO1108 by TMHMM2.0 at aa 7-29, 65-87, 100-122, FT 153-175,196-218 and 256-275" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1219903..1220583 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 35.7, E-value 1.1e-07" FT /inference="protein motif:Pfam:PF00528" FT CDS 1220618..1221424 FT /transl_table=11 FT /locus_tag="CBO1109" FT /product="putative polyamine transport system, permease FT protein" FT /db_xref="GOA:A5I0V1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I0V1" FT /protein_id="CAL82662.1" FT /translation="MRNKKIISNIIIYSFAFFFLFPIIILCLWSFAKNWSWPLVIPKEF FT GLRGLKYALDTKSKNLSILFKSIGISTIVTFITIIISIPAAKALGIYNFKGKNFIKILI FT FSPIIVPGISVALGTHVSFLKLGLANTILGVIIIHLIPCIPYAVFMLTDVFEIIGDKME FT KQAKVLGANRYQCFFYVTLPLISSGIMSAAFMTFIISFSQYFLTFLIGGGQVITYPIVM FT FPFIQSGDRTIASSFSLIFIITSLIYLLIINKCIKSYYKTDKFLNV" FT sig_peptide 1220618..1220711 FT /locus_tag="CBO1109" FT /note="probabilty 0.974, with cleavage site probability FT 0.665 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1220636..1220704,1220819..1220887,1220921..1220989, FT 1221002..1221070,1221146..1221214,1221227..1221295, FT 1221314..1221373) FT /note="7 probable transmembrane helices predicted for FT CBO1109 by TMHMM2.0 at aa 7-29, 68-90, 102-124, FT 129-151,177-199, 204-226 and 233-252" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1220807..1221400 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 40.4, E-value 4.3e-09" FT /inference="protein motif:Pfam:PF00528" FT CDS 1221436..1222455 FT /transl_table=11 FT /gene="potA" FT /locus_tag="CBO1110" FT /product="putative polyamine transport system, ATP-binding FT protein" FT /db_xref="GOA:A5I0V2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR008995" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I0V2" FT /protein_id="CAL82663.1" FT /translation="MKEIEVKGIKKIFNNKNVLDNISFSVEKGELMCLLGPSGCGKSTT FT LNIIAGLLQEDGGEILISGKNIKNIPVEKREIVIVFQEYMLFPHLNVYNNIAFGLNMRK FT ENKNRIKEKVNKILEMLSLQGLEYKYPKELSGGQKQRVAIGRALAIEPRVLLLDEPFTS FT LDINIRNSIRELVLKIQKKLGITTILVTHDKEEALMMSDHISLMINGEIIQHGTPKEIY FT ENPNSKEVANFFGERNYFKGKIIENKFYCEFGKFRVKGKKRDYSEIMINPENIKIYKDL FT ENKNCIGEVVSSKYAGDRIYYVVKYKDKDIKIIDYSNNLLEMGEKVSFSIDFSKGVLI" FT misc_feature 1221520..1222065 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 226.2, E-value 5e-65" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1221541..1221564 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1221835..1221879 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1222758..1223717 FT /transl_table=11 FT /locus_tag="CBO1111" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR016181" FT /db_xref="InterPro:IPR016732" FT /db_xref="InterPro:IPR024320" FT /db_xref="UniProtKB/TrEMBL:A5I0V3" FT /protein_id="CAL82664.1" FT /translation="MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKY FT AIYKGALIIKKKDFNDEYHFMQPLGYKKENLKDIIETLMGYKKEKCIKYLFKDLRYDFV FT KELKNLYKDEEIYSNIMVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNYNYD FT IRDFTEEGVIEDSLRIAELWYEKNDTKDKHLLYELQSIRDMCYNMDVLGLEGMGLYIDG FT EIAGFSIGEKFSDNMAIVHIEKANKDLRGAYTFVNKAFVENYFSDIPIINREQDLGIEG FT LRKAKLSYSPLDFEKKYMVDICYNCGCSDREERQRQII" FT CDS 1223821..1224372 FT /transl_table=11 FT /locus_tag="CBO1112" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I0V4" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I0V4" FT /protein_id="CAL82665.1" FT /translation="MPIDSLLVGKNLKLTAVEKEDVETIASWYRDISFLRHYDIISAFP FT KNKEQVEEIINSSYKSQYGYVFAIRNIKDNKIIGLTGLEDIVWNNGTALFYIGFGEEEA FT RGKGYGTQVTELVLNFAFKELNLHRIHLTVLEYNHRAIKLYEKVGFRREGTYREFIHRD FT GKRYDLYMYGILRGEWESLR" FT misc_feature 1224025..1224273 FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 58.5, FT E-value 1.6e-14" FT /inference="protein motif:Pfam:PF00583" FT CDS 1224382..1224717 FT /transl_table=11 FT /locus_tag="CBO1113" FT /product="putative thioredoxin" FT /db_xref="GOA:A5I0V5" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013766" FT /db_xref="UniProtKB/TrEMBL:A5I0V5" FT /protein_id="CAL82666.1" FT /translation="MEEIKNINYIENTIRDSSMVLIYFSSNEKCNVCTTLKDKVNAIGK FT KYNIKVFNVNIDNFKEASGRYNIFTVPTTLFYIEGKEILREGRYTSLIEFEKKIKRYCD FT LYGDISK" FT CDS 1224793..1225071 FT /transl_table=11 FT /locus_tag="CBO1114" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR005642" FT /db_xref="UniProtKB/TrEMBL:A5I0V6" FT /protein_id="CAL82667.1" FT /translation="MWAILLFLFLGMLIGYFKEFSKRGKKINGILQQTGVFVLLFFMGA FT SIGANKSVIKDIKNIGQVSIAFAITTTIFSIIILYIVSKRFLQKGEE" FT misc_feature order(1224793..1224843,1224877..1224936,1224979..1225038) FT /note="3 probable transmembrane helices predicted for FT CBO1114 by TMHMM2.0 at aa 5-27, 39-58 and 73-92" FT /inference="protein motif:TMHMM:2.0" FT CDS 1225072..1225668 FT /transl_table=11 FT /locus_tag="CBO1115" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR005642" FT /db_xref="UniProtKB/TrEMBL:A5I0V7" FT /protein_id="CAL82668.1" FT /translation="MTLFMVLSVFIGALCGYFFIPESFIPNIEFISTIALNLLILFVGI FT DVGSNKNLIKDLKRNGLKVLLIPLSIIIGSLTGGIITAIFFKLSIKSALSIAAGFGWYS FT LSAVMLTSLESAKIGTIAFLTNVFREIIAVITIPFLAKKLNHFTAIAPAGATSMDTTLP FT IISKNTSPEVAIASFINGVILSSLVPMLISFIYTM" FT misc_feature 1225072..1225662 FT /note="Pfam match to entry PF03956 DUF340, Membrane protein FT of unknown function (DUF340), score 155.3, E-value 1.1e-43" FT /inference="protein motif:Pfam:PF03956" FT misc_feature order(1225078..1225131,1225141..1225200,1225261..1225329, FT 1225357..1225410,1225423..1225491,1225588..1225656) FT /note="6 probable transmembrane helices predicted for FT CBO1115 by TMHMM2.0 at aa 3-20, 24-43, 64-86, FT 96-113,118-140 and 173-195" FT /inference="protein motif:TMHMM:2.0" FT CDS 1225956..1226510 FT /transl_table=11 FT /gene="maa" FT /locus_tag="CBO1116" FT /product="maltose O-acetyltransferase" FT /EC_number="2.3.1.79" FT /db_xref="GOA:A5I0V8" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR024688" FT /db_xref="UniProtKB/TrEMBL:A5I0V8" FT /protein_id="CAL82669.1" FT /translation="MKKKTEKDKMLAGELYYAMDEELVKEHIRSQQLLAEFNNSLGEDK FT SELLKPLFGKVGDNFSIKPTFHCDYGSNIYVGENFFANYDCIILDVCKVTIGDNCMLAP FT RVCIYTATHPLDAETRISGLEYGKPVVIGDNVWIGGNSVIVPGVTIGNNVVVAAGSIVV FT NDIPDNVVVGGNPAKIIKHLT" FT misc_feature 1226232..1226285 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 15.3,E-value FT 0.15" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 1226340..1226393 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 14.5,E-value FT 0.26" FT /inference="protein motif:Pfam:PF00132" FT misc_feature 1226367..1226453 FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT /inference="protein motif:ProSite:PS00101" FT misc_feature 1226394..1226447 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 10.3,E-value FT 5.1" FT /inference="protein motif:Pfam:PF00132" FT repeat_region 1226531..1226886 FT repeat_region 1226914..1227014 FT repeat_region 1227068..1227106 FT repeat_region complement(1227305..1227534) FT CDS complement(1227570..1228553) FT /transl_table=11 FT /gene="birA" FT /locus_tag="CBO1117" FT /product="BirA bifunctional protein [includes: biotin FT operon repressor; biotin--[acetyl-CoA-carboxylase] FT synthetase" FT /EC_number="6.3.4.15" FT /db_xref="GOA:A5I0V9" FT /db_xref="InterPro:IPR003142" FT /db_xref="InterPro:IPR004143" FT /db_xref="InterPro:IPR004408" FT /db_xref="InterPro:IPR008988" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013196" FT /db_xref="UniProtKB/TrEMBL:A5I0V9" FT /protein_id="CAL82670.1" FT /translation="MKEAIVNILKNSSHTFISGQYISDKLGVSRTAIWKYINGLKKEGY FT NIESASKKGYRLISCPDILTFEEIISLLKTKVIGQNIIHFDSINSTNDKAKKIASSEND FT GTIIISEEQTLGKGRLGRTWFSSKFKGIYMSIILKPDINTMDVPKITQIAAAAVLTALL FT NNNIKAYIKWPNDIIVNNKKVCGILTEMSGEINKVNYVVVGMGINVNCEEEDIPKDLLS FT KATSLKIEKDREFKRNILVADILNNFENLYTELIECNNIDTSIEICKENSILIGKEVRI FT INRTRESFGKAVGLNSNGELLVQFENGEIKPLISGEISVRGMNGYV" FT misc_feature complement(1227591..1227734) FT /note="Pfam match to entry PF02237 BPL_C, Biotin protein FT ligase C terminal domain, score 41.0, E-value 2.8e-09" FT /inference="protein motif:Pfam:PF02237" FT misc_feature complement(1227909..1228316) FT /note="Pfam match to entry PF03099 FT BPL_LipA_LipB,Biotin/lipoate A/B protein ligase family, FT score 132.6,E-value 7.5e-37" FT /inference="protein motif:Pfam:PF03099" FT misc_feature complement(1228440..1228505) FT /note="Predicted helix-turn-helix motif with score FT 1636.000, SD 4.76 at aa 17-38, sequence FT ISGQYISDKLGVSRTAIWKYIN" FT CDS 1228717..1228920 FT /transl_table=11 FT /locus_tag="CBO1118" FT /product="copper associated protein (copper ion binding FT protein)" FT /db_xref="GOA:A5I0W0" FT /db_xref="InterPro:IPR006121" FT /db_xref="UniProtKB/TrEMBL:A5I0W0" FT /protein_id="CAL82671.1" FT /translation="MNNLHLNVSGMANNESKTRLLNALDRVKGVQEVAIDLARGTVEVG FT YNKPANEMDIKNCIEHTGYKVI" FT misc_feature 1228729..1228917 FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 15.2, E-value FT 0.026" FT /inference="protein motif:Pfam:PF00403" FT CDS 1229196..1229633 FT /transl_table=11 FT /locus_tag="CBO1119" FT /product="putative regulatory protein" FT /db_xref="InterPro:IPR000644" FT /db_xref="UniProtKB/TrEMBL:A5I0W1" FT /protein_id="CAL82672.1" FT /translation="MNIAFFLTPKLEVIYENENSTMRQALERMEYHRYTAIPLIDDNGK FT YVGTLTEGDMLWKIKNTPYISFNDTNKISLNDVPRHTYNKPVHINAEIEDLISLSINQN FT FVPVVDDNHIFIGIIKRSQIINYCYDCIKEKKDIIIKEGKS" FT misc_feature 1229214..1229375 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 41.4, E-value 2.1e-09" FT /inference="protein motif:Pfam:PF00571" FT misc_feature 1229427..1229582 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 7.0, E-value 0.51" FT /inference="protein motif:Pfam:PF00571" FT CDS 1229793..1231226 FT /transl_table=11 FT /locus_tag="CBO1120" FT /product="two-component sensor kinase" FT /db_xref="GOA:A5I0W2" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:A5I0W2" FT /protein_id="CAL82673.1" FT /translation="MENISTVIIKERQEVIKKFLPIRFILINAVIGFIYVSYVKSDLKS FT FCIFNIAMVEGIIFNNMLCGFSSRDMKTFKNKFNSKYNNKTKIYKNFINNIISPIIILK FT DEKIYFMNDEAKKYIKIKKNINFNNINIYDYLEEKFYKEGLLKIDNIKNSTGITYLNEK FT IILKNGEILKVDLRCFVLDLNGEEFVSISIKNNVLLQENKKLYEELEKNKVEHRQRAEF FT YANISHDLKTPINIIYSAIQVMNMALDNKKIDTIEKYIGVIKQNCYRLLRLVNNIVNTN FT KIESGCCKIKLNNNNIVSLVEDIVTSVSTYVENNDMDIIFDTDTEEKIIACDKDMIERV FT VLNLISNSVKYKQKGKGSIQVTVQDKEDRVIVSVKDNGIGIPENIQKNVFNRFVQSNRK FT EYDLTTCSSGIGLALVKSIIDMHDGNIQINSRENKGTEIIFELPSRKVKENEKCKEIYT FT KNIGKNVKIEFPEIYDSAI" FT misc_feature 1229850..1229909 FT /note="1 probable transmembrane helix predicted for CBO1120 FT by TMHMM2.0 at aa 20-39" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1230444..1230650 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 46.1, E-value 8e-11" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 1230786..1231127 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 116.8, FT E-value 4.4e-32" FT /inference="protein motif:Pfam:PF02518" FT CDS complement(1231338..1231463) FT /transl_table=11 FT /locus_tag="CBO1121" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0W3" FT /protein_id="CAL82674.1" FT /translation="MPKDSQPDNKKARMEKCNYQTPIISEEGKNKITDKSKNKNK" FT CDS 1232092..1232871 FT /transl_table=11 FT /locus_tag="CBO1122" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0W4" FT /protein_id="CAL82675.1" FT /translation="MEKDFAIAFIGNNIFYHLGVIKAVDEYNMYNKFKAVSGTGLGSLS FT AIMFGKKDCNSFKNLCTLMSDIKRIHIKEDEVYEILNMHTINKSLNQKIYMWSRKISKE FT GMINWSDMLKIINNKYISVGKNNFKMDCYLGCYELPFMRKSVFKLNNYDSNYIEKVILN FT SVAKPSIFNNRVKSKSFITGDINCELPIEILKDNNYKNIIIIDSDNMKIEYRYEEVEKF FT NMKSLENEIKYDESEKYIQKAYEDTINIIKNNLKNIA" FT CDS 1233109..1233234 FT /transl_table=11 FT /locus_tag="CBO1123" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0W5" FT /protein_id="CAL82676.1" FT /translation="MVVVVESGPYEPKSELNTINRKYHSYKAFLFSLGLNFISKL" FT CDS 1233348..1234706 FT /transl_table=11 FT /locus_tag="CBO1124" FT /product="putative Mg2+ transporter" FT /db_xref="GOA:A5I0W6" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR006667" FT /db_xref="InterPro:IPR006668" FT /db_xref="InterPro:IPR006669" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:A5I0W6" FT /protein_id="CAL82677.1" FT /translation="MVPKGGATMEIILELINEKKYSEAREELLKLNSVDIATLLEEVDN FT KKNMLVLFRLLPKDIEIDVFSYMSNDMQQYIIQSITHEEMTTIIDQLYFDDVIDLLEEM FT PANIVKKILLNTDEKKRKLINQFLKYEEDSAGSIMTIEFVDLKKEMTVEQAIERIRKIG FT VDKQTINTCYVIDRNRKLEGIISIRRLILSNKDVLIKDIMKENYVSINTFDDQEYVASQ FT FKKYDLVSMPVVDKEHRLVGIITIDDIVDIIDQENTEDFHKMAAMEPSEEEYLKTGVFE FT LAKHRIIWLLVLMISATFTGNIIRKSEDVLQSVVILASFIPMLMDTGGNSGSQSSTLVI FT RGLALGEIKLKDIFKVMWKEFRVSVVVGIALSVVNFFRVYFIEKVSFMVSMTVCISLFF FT TVVLAKVVGGILPIVAKKLRLDPAIMASPLITTIVDAVALLIYFGIAKILLGI" FT misc_feature 1233372..1233752 FT /note="Pfam match to entry PF03448 MgtE_N, MgtE FT intracellular domain, score 112.6, E-value 8.1e-31" FT /inference="protein motif:Pfam:PF03448" FT misc_feature 1233756..1233932 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 24.5, E-value 0.00026" FT /inference="protein motif:Pfam:PF00571" FT misc_feature 1233948..1234109 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 47.7, E-value 2.8e-11" FT /inference="protein motif:Pfam:PF00571" FT misc_feature 1234305..1234685 FT /note="Pfam match to entry PF01769 MgtE, Divalent cation FT transporter, score 167.0, E-value 3.4e-47" FT /inference="protein motif:Pfam:PF01769" FT misc_feature order(1234434..1234493,1234530..1234589,1234617..1234685) FT /note="3 probable transmembrane helices predicted for FT CBO1124 by TMHMM2.0 at aa 363-382, 395-414 and 424-446" FT /inference="protein motif:TMHMM:2.0" FT misc_binding 1235143..1235364 FT /locus_tag="CBO1126" FT /bound_moiety="tRNA" FT /note="T-box leader" FT CDS 1235709..1236782 FT /transl_table=11 FT /locus_tag="CBO1126" FT /product="putative serine--glyoxylate aminotransferase" FT /EC_number="2.6.1.45" FT /db_xref="GOA:A5I0W7" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR024169" FT /db_xref="UniProtKB/TrEMBL:A5I0W7" FT /protein_id="CAL82678.1" FT /translation="MHKRLFIPGPVEVERDVLEKMSAAMIGHRSKEASVLQKDISDKLR FT KVFNTKEEILLSTSSGSGLMEGAIRCTTVKRAAVFAIGAFGKRWYDMAVANNVPADLYE FT VPWGEAIKPELVEEVLATGKYDSIFITHNETSTGIMNPVEEISKVIRKYPEVIWSLDCV FT SSMAGTKIDVDKLGIDVCITSTQKALALPPGMAICSFSQRAVERAEKVTNRGYYLDLLS FT LYKYIQKKNYQYPSTPSLSHMFAMDYRLDKILEEGLEERYERHIEMAEYVRDWARKYFK FT IYGDEKYLSNTLTNIENTRNIDIKKLNEELGKRGFQISNGYGKLKDKGFRIAHMGQCTL FT KDIKELLENINNILDLK" FT misc_feature 1235727..1236746 FT /note="Pfam match to entry PF00266 FT aminotran_5,Aminotransferase class-V, score 9.7, E-value FT 1.1e-10" FT /inference="protein motif:Pfam:PF00266" FT CDS 1237010..1237954 FT /transl_table=11 FT /gene="serA" FT /locus_tag="CBO1127" FT /product="putative D-3-phosphoglycerate dehydrogenase" FT /EC_number="1.1.1.95" FT /db_xref="GOA:A5I0W8" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR006236" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5I0W8" FT /protein_id="CAL82679.1" FT /translation="MIKILVSDGMEQNALNKLNEQGFVVLDKHFEKEELKDKIKDFDAI FT IIRSATKVDKEIIDAGIKGNLKLVVRAGVGLDNVDLEYAKEKEVKVFNTPKASSVSVAE FT LTLGHMLCISRFINTANVTMLQGKWEKKKYKGTEIYGKTLGLIGFGRIAREVAKRANAL FT GMNVIYYDIAGKCEEYEEFKCCTLDYLLNNSDFISAHIPFSKDRGALLKEEEFNKMKDG FT VYIINCARGGVIEEEALLKALNNGKVTAAALDVFENEPKPKKELINHERVSITPHIGAS FT TKEAQMRIGEEIVDILDNFFNIGGEEHDHIKII" FT misc_feature 1237013..1237297 FT /note="Pfam match to entry PF00389 2-Hacid_DH, D-isomer FT specific 2-hydroxyacid dehydrogenase, catalytic FT domain,score 111.2, E-value 2.1e-30" FT /inference="protein motif:Pfam:PF00389" FT misc_feature 1237313..1237840 FT /note="Pfam match to entry PF02826 2-Hacid_DH_C, D-isomer FT specific 2-hydroxyacid dehydrogenase, NAD binding FT domain,score 183.8, E-value 2.9e-52" FT /inference="protein motif:Pfam:PF02826" FT misc_feature 1237415..1237438 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1237932..1239254 FT /transl_table=11 FT /locus_tag="CBO1128" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR008323" FT /db_xref="UniProtKB/TrEMBL:A5I0W9" FT /protein_id="CAL82680.1" FT /translation="MTILKSFRAIRPNKGFECKIAALPYDVVNTDEAREIGGKNPYSFL FT HIDRAEIDLNKDINPYDLKVYDKARENLNNMINKELFIKEEKPMLYIYSLNMNGNVQTG FT IVGCLSIDDYMNNVIKKHEHTREEKELDRIKHVDTCSAHTGPIFLTYKHEEKLNTIIEN FT CTKNKALYDFVAEDGVRHTVWQIDDENTIEEICHIFKAIPSVYIADGHHRAASAVKVGL FT KRREENENYTGKEEFNYFLGVLFPHKELKIMDYNRVVKDTLGYTEEEFINKIEEKFIVK FT PYNPKLENKKTIKNCEAEHKLQSEQLEKAEELQYRPKEKYNFGMYYKKKWYELKAKPNT FT FNVEDEVESLDAAILQNNLLQPILKIQDPRKDNRIDFVGGIRGLKILEELVDKTENGVA FT FSMYPTAIEEIIKIADNNKVMPPKSTWFEPKLRSGLFIHEI" FT misc_feature 1237938..1239251 FT /note="Pfam match to entry PF06245 DUF1015, Protein of FT unknown function (DUF1015), score 649.6, E-value 1.8e-192" FT /inference="protein motif:Pfam:PF06245" FT CDS 1239855..1241045 FT /transl_table=11 FT /gene="norV" FT /gene_synonym="flrD" FT /locus_tag="CBO1129" FT /product="anaerobic nitric oxide reductase flavorubredoxin" FT /db_xref="GOA:A5I0X0" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR008254" FT /db_xref="InterPro:IPR016440" FT /db_xref="UniProtKB/TrEMBL:A5I0X0" FT /protein_id="CAL82681.1" FT /translation="MAFKINDIVTWVGKIDWELRSFHGKEYSTYKGSSYNSYLIKDEKN FT VLIDTVWQPFAKEFVSNLKKEIDLDKIDYIIVNHSESDHSGALPELMKEIPSTPIYCTK FT NGAKLLKAHYHEDWNFVEVKTGDTLEIGENKLIFVEARMLHWPDSMFTYLSGKNMLFSN FT DAFGQHYASELMYNDKVDSGELLQEAIKYYANILTPYSPLVIKKIEEILSFNLAVDMIC FT PSHGIIWRENPLQIVDKYMEWAKNYRENQATIIYDTMWNSTRRMAETIAEGIKKINKDV FT AIKIFNSSKNDKNDIITEVFKSKVILVGSSTINRGMLSSTALILEMIKGLGFKEKKAAA FT FGSYGWGGESVKLITEELSKAGFEIMNDGIREMWNPDDEALDRCRSFGENIGKSIK" FT misc_feature 1239954..1240529 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 96.7, FT E-value 4.9e-26" FT /inference="protein motif:Pfam:PF00753" FT misc_feature 1240608..1241039 FT /note="Pfam match to entry PF00258 flavodoxin, FT Flavodoxin,score 53.6, E-value 4.4e-13" FT /inference="protein motif:Pfam:PF00258" FT CDS 1241204..1245493 FT /transl_table=11 FT /locus_tag="CBO1130" FT /product="putative activator of 2-hydroxyacyl-CoA FT dehydratase" FT /note="similarity to activators of 2-hydroxyacyl-CoA FT dehydratases is confined to the N-terminal region" FT /note="Also similar to CBO3170 (62.2 38d)." FT /db_xref="InterPro:IPR002731" FT /db_xref="InterPro:IPR008275" FT /db_xref="InterPro:IPR010327" FT /db_xref="InterPro:IPR018709" FT /db_xref="UniProtKB/TrEMBL:A5I0X1" FT /protein_id="CAL82682.1" FT /translation="MKEILHLGIDIGSTTIKLVLLDMNDNIIYSKYERHYSNIKEAVVF FT SIKEVFKKYKNYDITVMITGSSGLSLSKLLGVSFIQEVIACTEAVETFMSNADVAIELG FT GEDAKITYFEDSLEQRMNGVCAGGTGAFIDQMATLLETDAKGLNELAKNYKIIYPIAAR FT CGVFAKTDIQSLINEGATKEDIAASIFQAVVNQTISGLACGKPIKGNVAFLGGPLYFLS FT ELRKRFIDTLKLKEKEILFPQNPQLFVAIGAAIESKKEKVITFEELLKAVESLNNSNNM FT ATSYTLEPLFKNEQELQDFRQRHYNYKAKRRDITTYEGKAFLGIDAGSTTTKAILIDNE FT GAILYSFYGSNKGNPMEITINILKDIYSKINGKIKIAKVTVTGYGEALMKSALNIDIGE FT VETVAHYRAAKHFLKDVDFILDIGGQDMKCIKIKDGTINSIQLNEACSSGCGSFLDMFA FT QSLNMNIKEFSKKGLLSKNPVDLGSRCTVFMNSKVKQVQKEGADIGAISSGLSYSVIKN FT ALYKVIKIKKPEDLGEKIIVQGGTFYNESVLRAFEKITGKEVTRPDIAGLMGAFGAALI FT AKDKYNKNETSNVLGESELKNFKMSNEFRHCGLCSNNCLLTVSKFSDGRKFISGNRCER FT CTGATKNEKKAANLFDYKYKRIFGYKPLSIEKATRGEVGIPRVLNMYENYPFWYTFFTE FT LGFRVILSPNSTKKIYNEGIDTIPSESICYPAKIAHGHIASLIKKGLKFIFYPCISYER FT LEDKRADNHYNCAIVISYPEVVKNNITSLRSKNIIYKNPFLNFNDRKSIKKNLYEELEV FT FDISQKEISFAIDKAYEEIDKVKEDIKNKALEILEDLDKSGGKGIVLSGRPYHLDLEIN FT HGIANMISEEGLAVFTEDSVADLVEIPRPLRVLDQWTYHSRAYRAAQFVGTRENLELIQ FT LNSFGCGLDAIATDQVQEILESFGKIYTLLKIDEVNNLGAARIRVRSLKAAMDNINKSQ FT TSNLKNIKLIKPYDKTIFTKEMREKHTILCPQFSPIHFELLEVAFKSSGYNLKVLPTVN FT PHTIEEGLKYVNNDTCYPAIVIVGQIISALKSGEYDLNNISVVISQTGGTCRASNYIAL FT IRKALKDSGYEKIPVISLSAQGIENNPGFKITLPMINRALMALAYGDMLLKMTNRVRPY FT EKIKNSTKLLYLKWLYRCKNNIYNGSFKEFKNITKEMVNEFDSLEIKNIIKPKVAVVGE FT IFLKYNSLANNNIIGILEKEGAEVIIPDLMYFLLYCCYNQKFKYEKLGGNLKDFLVGRL FT AIKYIKLYSIEMKRALRNSKRFMAPQRIEKLAKGTDDILSLGNQAGEGWLLTAEIVKLL FT ESGISNMICIQPFACLPNHVIGKGMIREIKRRYPYLNIIPIDYDPGASEVNQLNRIKLM FT LSTAIKNLEKLEKNKNDKVEIKNKGFS" FT misc_feature 1241222..1241974 FT /note="Pfam match to entry PF01869 FT BcrAD_BadFG,BadF/BadG/BcrA/BcrD ATPase family, score 44.7, FT E-value 2.2e-10" FT /inference="protein motif:Pfam:PF01869" FT misc_feature 1242170..1242934 FT /note="Pfam match to entry PF01869 FT BcrAD_BadFG,BadF/BadG/BcrA/BcrD ATPase family, score 105.8, FT E-value 8.7e-29" FT /inference="protein motif:Pfam:PF01869" FT CDS complement(1245567..1247081) FT /transl_table=11 FT /gene="opuD" FT /locus_tag="CBO1131" FT /product="glycine betaine transporter" FT /db_xref="GOA:A5I0X2" FT /db_xref="InterPro:IPR000060" FT /db_xref="UniProtKB/TrEMBL:A5I0X2" FT /protein_id="CAL82683.1" FT /translation="MIKKLKKEKVFYVSIISLLFLLLLAFFNIDAFAKSTKNILNFLLD FT RFSWFYILVMLSFFIFCMWAAFSKYGKLKLGKDNEDPEYSLISWFTMLFSAGMGIGLIF FT WGVAEPLNHYIHPFNLQGFTEEAKTFAMTKSFLHWGISAWSCYAILALALTYFQFRKGK FT PALMSSLLIPLIGEKKASGWIGNTIDIFTIFATVAGVITSLGLGALQINAGLNYLLNIP FT ENIKVQLIIIILVTICFIASASSGLNKGIQTLSNLNMLLAAVLLIFVILTGPSLEMNKN FT LFKGLGVYAKELLIDNNNIFVTGDWYKKWTIFYWGWWIAWAPPVGIFIARISKGRTIKE FT FLLGVLFVPSIICFIWFAVFGTMGFNVSHTVALTAITRAETAFFVVMNEYHFGYIISLI FT AIMLLGTFFVTSADSATFVLGMLSSNGDLNPKTSKKFIWGVLQASLTVVFLIAGGLDMI FT QTVSIIAAFPFAFIMIIAMISLRKSLKNESLEISSLSNNKKIEKVI" FT misc_feature complement(1245621..1247054) FT /note="Pfam match to entry PF02028 BCCT, BCCT family FT transporter, score 663.7, E-value 1e-196" FT /inference="protein motif:Pfam:PF02028" FT misc_feature complement(order(1245642..1245710,1245723..1245776, FT 1245846..1245914,1245993..1246061,1246095..1246154, FT 1246254..1246322,1246341..1246409,1246452..1246520, FT 1246611..1246679,1246758..1246826,1246881..1246940, FT 1246983..1247051)) FT /note="12 probable transmembrane helices predicted for FT CBO1131 by TMHMM2.0 at aa 11-33, 48-67, 86-108, FT 135-157,188-210, 225-247, 254-276, 310-329, 341-363, FT 390-412,436-453 and 458-480" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(1246979..1247081) FT /gene="opuD" FT /locus_tag="CBO1131" FT /note="probabilty 1.000, with cleavage site probability FT 0.995 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT CDS 1247440..1248066 FT /transl_table=11 FT /gene="busR" FT /locus_tag="CBO1132" FT /product="putative transcriptional repressor (GntR-family) FT of the glycine betaine uptake system" FT /db_xref="GOA:A5I0X3" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I0X3" FT /protein_id="CAL82684.1" FT /translation="MENIDTPKYIKIAIDIAQRIYNNEFKVGEKVRGRSTLSSKYNVSP FT ETIRRAVSLLKDMQVVEVTEKSGIYIKSVENAYLFIHRFNAKNNVKELRQKIKSLQKEK FT IKIEKQIDKYIDLILENSIQFENINLEDSYEMVIYPNSYIVNKTISDTEFWKHTNGTII FT SVKRKDKMYISPGPHFRFETGDIVRIICSEDDLNRAQNYIQQGVN" FT misc_feature 1247461..1247652 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 25.0, E-value FT 0.00012" FT /inference="protein motif:Pfam:PF00392" FT misc_feature 1247533..1247598 FT /note="Predicted helix-turn-helix motif with score FT 1536.000, SD 4.42 at aa 32-53, sequence FT RGRSTLSSKYNVSPETIRRAVS" FT misc_feature 1247806..1248060 FT /note="Pfam match to entry PF02080 TrkA-C, TrkA-C FT domain,score 51.8, E-value 1.6e-12" FT /inference="protein motif:Pfam:PF02080" FT CDS 1248177..1248677 FT /transl_table=11 FT /locus_tag="CBO1133" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0X4" FT /db_xref="InterPro:IPR002563" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:A5I0X4" FT /protein_id="CAL82685.1" FT /translation="MSVNFTLNLEEAMEHLYKKGAFLTGSIDDKVNTMTISWGNIGFQW FT RKPVFIALVRESRYTKEFIDKSNEFTVTIPFGDTMKEELAFCGSKSGRAFDKIKECNFK FT LRDGDKVDTPVIESNGMHYECKVIYKQPLDLKAMDKELVDAFYNDGNNHVLYYGEILNC FT YKL" FT CDS 1248976..1249536 FT /transl_table=11 FT /gene="pncA" FT /gene_synonym="nam" FT /locus_tag="CBO1134" FT /product="pyrazinamidase/nicotinamidase" FT /EC_number="3.5.1.-" FT /db_xref="GOA:A5I0X5" FT /db_xref="InterPro:IPR000868" FT /db_xref="UniProtKB/TrEMBL:A5I0X5" FT /protein_id="CAL82686.1" FT /translation="MFKSILIIDCQNDFISGSLACDNGEIAVKNIINLLNINKDLKVFY FT SLDWHSENNKSFKINGGIWPVHCVANRFGAKLEESFYKELQHKNHSPNNKKILFLKGKN FT DHIEEYSAYEGENILGNKINEVLDKDVIVCGIASEFCVKETVEDLIRNGFNVKLYIDGV FT AYVNKKEHEKTLNNLREQGAKFI" FT misc_feature 1248982..1249533 FT /note="Pfam match to entry PF00857 FT Isochorismatase,Isochorismatase family, score -27.9, FT E-value 2.9e-05" FT /inference="protein motif:Pfam:PF00857" FT CDS 1249694..1250005 FT /transl_table=11 FT /gene="pspE" FT /locus_tag="CBO1135" FT /product="phage shock protein (rhodanese)" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:A5I0X6" FT /protein_id="CAL82687.1" FT /translation="MYINTITPEEAKKMLDEREDITILDVRGENEYREGHIKGSKSIPL FT EFLETNVEDEVPDKNSTIFIYCQSGKKAKVGYEYLKELGYDNVYDMGGIMDWPYEIES" FT misc_feature 1249712..1249993 FT /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like FT domain, score 57.7, E-value 2.7e-14" FT /inference="protein motif:Pfam:PF00581" FT CDS 1250081..1250545 FT /transl_table=11 FT /locus_tag="CBO1136" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:A5I0X7" FT /protein_id="CAL82688.1" FT /translation="MAYTIIDIINNLIDIEKKGFSIFREISNNCEDLRISIVSKTIANQ FT ERKYTQYYENLKKDIDVLDKEDIDFSIYDRISSRMQQFKISITMPVVTDIKKLINFARE FT LSKENLALLIYIQGQLIRKETDTNMLAYNIMGKIIEEQEKYSKSLKALYK" FT CDS 1250822..1251022 FT /transl_table=11 FT /locus_tag="CBO1137" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0X8" FT /protein_id="CAL82689.1" FT /translation="MIIDKDQIRNMNPYILLSLVNTKLRDEFENLKDFCKTYDLKEDEI FT ITKMKTIDYKYDSEINQFTSI" FT CDS 1251199..1252110 FT /transl_table=11 FT /locus_tag="CBO1138" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I0X9" FT /db_xref="InterPro:IPR001440" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5I0X9" FT /protein_id="CAL82690.1" FT /translation="MQLYKINNYKVIAKNFYRERNIIKTLEFYNKAYNTPMGSKDVELL FT LDMALIYDELEEYEKAEKKYKEILKVNPKDSRAFYGLAIIYDNKEQYKKAIKLYEKAIE FT YDKNYNRAYFFLAGAYDNVGEKEKAIKCYEKVISLDEKDFWSYVNLSSIYEEVGLLEKA FT LCLADKALELYPNHYMPLFNKGVIYKKLNKLEEAISNYKLSIEDNENYSYSYLNLAVIY FT KELKDYKKAINIISEGILNNTEEGFLYYNRACYYTYLKEYEKAMKDLYKAVELYPGFVK FT YIKEDEELHILKDRKDFMNLIK" FT misc_feature 1251322..1251423 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 28.4, E-value 1.7e-05" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1251424..1251525 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 36.5, E-value 6.5e-08" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1251526..1251627 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 31.1, E-value 2.7e-06" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1251628..1251729 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 13.6, E-value 0.09" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1251730..1251831 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 21.2, E-value 0.0026" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1251832..1251933 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 13.4, E-value 0.095" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1251934..1252035 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 29.3, E-value 9.5e-06" FT /inference="protein motif:Pfam:PF00515" FT CDS 1252271..1252843 FT /transl_table=11 FT /gene="xpt" FT /locus_tag="CBO1139" FT /product="xanthine phosphoribosyltransferase" FT /EC_number="2.4.2.-" FT /db_xref="GOA:A5I0Y0" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR010079" FT /db_xref="UniProtKB/Swiss-Prot:A5I0Y0" FT /protein_id="CAL82691.1" FT /translation="MKLLEDKILKEGILLEGNILKVDSFLNHQMDVKLFNEIGKEFKRR FT FEGCSINKILTIEASGIGIATIVSQYFDFCPVVFAKKVDAANMDKDTYESKVHSFTKNK FT TYNVRVSKKYINKGDKILLIDDFLANGCAALGLIDIIKQGGAELIGVGIAIEKGFQKGR FT KELEKVGAKVESLAILDKIENDKVYFK" FT misc_feature 1252334..1252810 FT /note="Pfam match to entry PF00156 FT Pribosyltran,Phosphoribosyl transferase domain, score 51.5, FT E-value 2e-12" FT /inference="protein motif:Pfam:PF00156" FT CDS 1253141..1253722 FT /transl_table=11 FT /locus_tag="CBO1140" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR024218" FT /db_xref="UniProtKB/TrEMBL:A5I0Y1" FT /protein_id="CAL82692.1" FT /translation="MSEIINFNDLKNKATDKDLDKFEQYMYSLYSSVVQGTLTMSDFME FT KIQEYMEKNNISQEKFVNIQKKLMEKYTDAYGIDFKDVEKQMKDLGVDVKGLGLNAESF FT SYENVKKNISFHEKYNAKPVVKQVTEYHIKNDKNDVKVELIGENIFLKSSKKIDLKDTE FT LNEFLCSYKKLFDNKQLSITVCESITSYNY" FT CDS 1254029..1255411 FT /transl_table=11 FT /locus_tag="CBO1141" FT /product="putative thiosulfate sulfurtransferase" FT /EC_number="2.8.1.1" FT /db_xref="GOA:A5I0Y2" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:A5I0Y2" FT /protein_id="CAL82693.1" FT /translation="MKKNFKGIVLLIFGIMMFTLIGCTSNEKTEKKEESTSLVKEIKTD FT ELKKNITSKEWVVLDTRSNDAFNGWKLDGVKRGGHIKGATDFSANWLKVEDTEKNKEKR FT LEEALKNKGITKDKNVVLYDANGKDAEEVAKYLNKKGITKLYKYDVKEWAEDDKLAMES FT YSNYQMLVPASWVNDLINNKKPETFKGDKYKVFEVSWGDESKAEDYKKGHIKGAVHINT FT DEVEKGPVWNRLPDKDLEKFAKNNGITADTTVVLYGADSMPSFRVAAILKYMGVKDVRV FT LNGGTAAWTSAGYELDTTSNKKTPVDSFGVKVPLNKGYIVDLPEAKEILKDKEGSKLVD FT IRSWDEFIGKTSGYDYIKAKGRPTGAVWGHAGSDNSHLEDFRNVDNTMRNSSEILSMWE FT KEGIKPDQRLSFYCGTGWRAAEVLIYADVMGLKNISLYDGGWNEWSLDKNNPIEVGDPS FT KK" FT sig_peptide 1254029..1254122 FT /locus_tag="CBO1141" FT /note="probabilty 0.999, with cleavage site probability FT 0.527 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1254047..1254100 FT /note="1 probable transmembrane helix predicted for CBO1141 FT by TMHMM2.0 at aa 7-24" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1254065..1254097 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1254542..1254904 FT /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like FT domain, score 29.1, E-value 1.1e-05" FT /inference="protein motif:Pfam:PF00581" FT misc_feature 1254992..1255369 FT /note="Pfam match to entry PF00581 Rhodanese,Rhodanese-like FT domain, score 46.5, E-value 6.3e-11" FT /inference="protein motif:Pfam:PF00581" FT CDS 1255607..1256029 FT /transl_table=11 FT /locus_tag="CBO1142" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0Y3" FT /protein_id="CAL82694.1" FT /translation="MKRTHNILNIILSIIQIIFILPALILENLAKKKMGVIRYLIFKKE FT EFSSGIFNANNLIISIYILLFISIIIIIIFIVNMKKKLKCKINFFIIILLNIILFLLVS FT YESIFNLQAYHFFIIEIFIIIIIEYIKLFINIFSNR" FT misc_feature order(1255625..1255684,1255775..1255843,1255862..1255921, FT 1255949..1256017) FT /note="4 probable transmembrane helices predicted for FT CBO1142 by TMHMM2.0 at aa 7-26, 57-79, 86-105 and 115-137" FT /inference="protein motif:TMHMM:2.0" FT CDS 1256373..1257476 FT /transl_table=11 FT /locus_tag="CBO1143" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:A5I0Y4" FT /protein_id="CAL82695.1" FT /translation="MIKDKKFKYLDIIIPIVSSLVISFILIQILKNYGNVFSGIGKVFK FT ILSPFIIAFIIAYILNPLVKFFERRFKIKRGLSILICYVITLGIVVLVLSMIVPKVFQS FT IMDIFQNIPYYTNKGYEMVNDLLVNNKELSNAINSSNVFKGNYKDLIDKIASFTSVGLN FT TILSQTISFTTFMVNLVFGLIIAIYVLNDREKFTYNSKRIVFLIFREKYGEKIIEFFRT FT VNSMIKLYIGIKALDSLIIGLLALIGLIILKSPYALLIALIVCVTNMIPYFGPFIGMIP FT AVVINLFYVPVKALWVLIFLFLLQQFDAWYLEPKLVGDKVGLSPFLIILGITIGGSLFG FT VWGMLLASPAMAVIKIYTKKLAEKYNI" FT misc_feature order(1256391..1256459,1256502..1256561,1256598..1256666, FT 1256877..1256945,1257057..1257125,1257138..1257206, FT 1257219..1257287,1257345..1257413) FT /note="8 probable transmembrane helices predicted for FT CBO1143 by TMHMM2.0 at aa 7-29, 44-63, 76-98, FT 169-191,229-251, 256-278, 283-305 and 325-347" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1256433..1257458 FT /note="Pfam match to entry PF01594 UPF0118, Domain of FT unknown function DUF20, score 230.8, E-value 2.1e-66" FT /inference="protein motif:Pfam:PF01594" FT CDS 1257656..1257985 FT /transl_table=11 FT /locus_tag="CBO1144" FT /product="putative phage-related protein" FT /db_xref="InterPro:IPR004518" FT /db_xref="InterPro:IPR011379" FT /db_xref="UniProtKB/TrEMBL:A5I0Y5" FT /protein_id="CAL82696.1" FT /translation="MDFKDYEKEMKRTAGEFIKLDKNGLALGSMGISGEAGEVTDYIKK FT VLFHGHELCEDKLIEELGDVLWYITYLSKVIGSDLETIANKNIEKLKKRYPEGWDPDRS FT IHREE" FT misc_feature 1257725..1257952 FT /note="Pfam match to entry PF03819 MazG, MazG nucleotide FT pyrophosphohydrolase domain, score 62.0, E-value 1.4e-15" FT /inference="protein motif:Pfam:PF03819" FT CDS 1258122..1259861 FT /transl_table=11 FT /locus_tag="CBO1145" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I0Y6" FT /protein_id="CAL82697.1" FT /translation="MKKEFSLSTGKAMINFTAKYCDTAESLFNSYGFKRVLQAYMEKIK FT KRETNVYKYIESTMNIDDNDIFSEDVTNIFKLLMVLKAEEIRKLEDRYENVLENKDKFI FT LFVEDLYNFWRKLERYTIVQNSKIGDGLQNVSFIDANNNFSNLILKTYRKIEENVLGEK FT PRIYRQLPAGGNAGLILNNSSWDMPKNYEILKDIPFIESILLDPPFITYPKKNTRDGMF FT EETFQNPLKNCRINLDHWFCYPAKVGTLLAYIYFHRDYMAHGVTLCNLFEIATEEEYRG FT KKPDIVYVLGARDDNEKIQTVFYDDKENDIMLGYVNYNEAIDYFGYMKKMTLTLHNLIM FT IKRGYLPIHGAMVNIVTKNDKTANVIIMGDSGAGKSESLEAFRELSEDYISDMTIIFDD FT MGVVKLNKDEKPVGSGTEIGAFVRLDDLDTGYAFKQIDRSIFMNPDKVNARLVIPVASY FT KEITTEYPIDLFLYANNYEAKGENLEFFKDVNVALDTFRDGARMAKGTTTEKGLVKTYF FT ANPFGPAQKVEDTEKLLVEYFNKFFQSGVKVGQLRTRLGISGMEKDGPKKAAISLLEEI FT KNI" FT misc_feature 1258728..1258748 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT misc_feature 1259226..1259249 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1260632..1260772 FT /transl_table=11 FT /locus_tag="CBO1146" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0Y7" FT /protein_id="CAL82698.1" FT /translation="MKDGSSAKARAKELLLEGKSKEFIMDETRLRLKDIKRIEREITEK FT L" FT CDS 1260954..1262153 FT /transl_table=11 FT /locus_tag="CBO1147" FT /product="hypothetical protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0Y8" FT /protein_id="CAL82699.1" FT /translation="MDILQLINEVNNKSNEKNDKIAPVEILKQFKSGRSKALVFLVEYG FT EDNKVGIMKFTDCKEAKVFNEAYKVATNNNMQKYIAELICSYNITYNNKLISANLYDLA FT GDNIYNIETFLDKVLSEQELKKNVISKIGKFCFTWNKEHKKKYLTPMEIVKNEMSYRYM FT DKKYKEAFKSIGVSKDIQWVSIDGTEEILPNPYYYFNDENFLGDLKITCLTSYAHGDFQ FT GDNVIITEEKPIIIDFSDLLKDCNVFHDLRCLEAITLGDYLDIYEVKHRQQWLKVCKGV FT SQDILKVDIPDGKGMSLLRELMPLLRENLKIIVSDMRNVSYNPSFFVAGVAAGLINMRK FT FMDIDKKRAAFIYAAYNLKSMLKDKMVNMYNPSLDSCMIFNWVKGNQANKLINLKELIA FT " FT CDS 1262146..1262265 FT /transl_table=11 FT /locus_tag="CBO1148" FT /product="putative membrane protein" FT /note="No significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I0Y9" FT /protein_id="CAL82700.1" FT /translation="MHNEVKSICVYICLAKNILFHIKLIGVYLRNNYQNKINL" FT misc_feature 1262164..1262232 FT /note="1 probable transmembrane helix predicted for CBO1148 FT by TMHMM2.0 at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT CDS 1262612..1263367 FT /transl_table=11 FT /locus_tag="CBO1149" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I0Z0" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I0Z0" FT /protein_id="CAL82701.1" FT /translation="MIKIEHLKMQFEQAVILKDISIEIGDGEVVAIIGPSGTGKSTFLR FT CLNFLVKPTEGKITIDGFTVDAKTASKKDIHELRQKTAMVFQNYNLLKNKTAIQNIMEP FT MITVQKKTKKEAEEIAIDLIKKVGLLEKRDAYPREMSGGQQQRIGIARAMAVNTNVILF FT DEPTSSLDPELVGEVLTVIKQLAEEHNKTMLIVTHEMKFAKEVADKMIFLEGGYIAGMG FT TPKDIFQNCTNERIKKFVNTVTANSLEDK" FT misc_feature 1262690..1263259 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 227.0, E-value 2.8e-65" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1262711..1262734 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1263029..1263073 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1263368..1264033 FT /transl_table=11 FT /locus_tag="CBO1150" FT /product="ABC transporter, permease protein" FT /db_xref="GOA:A5I0Z1" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:A5I0Z1" FT /protein_id="CAL82702.1" FT /translation="MNFDFQWFINLFPIVLPALGLTIKISLVSLIFTVILSIIISIIRY FT YKIYGLYQIFGLYITFFRATPLVAQLFILYFGFPCIIPALKSMTAFQATVIALTLNTAS FT FMAETLRASLESVDVGQLEACYSMGMTRYQTMMRVVLPQAFVVALPSIGNQFIGIIKGS FT ALGFTVGLADIMAKAKMEAALSIRFFEAYLCVTLIYLVIVIFVEKIQRLLEKRIEKFC" FT misc_feature 1263422..1264024 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 86.5, E-value 5.7e-23" FT /inference="protein motif:Pfam:PF00528" FT misc_feature order(1263425..1263493,1263527..1263595,1263608..1263676, FT 1263779..1263847,1263917..1263985) FT /note="5 probable transmembrane helices predicted for FT CBO1150 by TMHMM2.0 at aa 20-42, 54-76, 81-103, 138-160 and FT 184-206" FT /inference="protein motif:TMHMM:2.0" FT CDS 1264087..1264926 FT /transl_table=11 FT /locus_tag="CBO1151" FT /product="ABC transporter, substrate-binding lipoprotein" FT /db_xref="GOA:A5I0Z2" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:A5I0Z2" FT /protein_id="CAL82703.1" FT /translation="MKNIKKAFLFVVFICMTFTMTACGGKNNDSQKKEEAKAPTKIVVA FT SGAASVPNSYVENGVHKGHEVDIWNAISKRTGIKVEFVTGEFNTLFGYLDSGKADTVGN FT TITINASRQDKYNFSEPYAYIPEKLVVHSNRTDIKKLKDVAGMTCGFIAGSNGGNLFEK FT MAKEQGIDIKLVTYDSSELLNQAFNQGKVDVMLLSAAEVAYKIKNGLLDARMVEEDVVV FT GAKAYPFVKGNSNSEQLNKTVTKAIEDMRKDGTLTQIYGKWYDIDFSQKPKDAKIGN" FT sig_peptide 1264087..1264156 FT /locus_tag="CBO1151" FT /note="probabilty 0.999, with cleavage site probability FT 0.367 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1264123..1264155 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1264210..1264884 FT /note="Pfam match to entry PF00497 SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3, score FT 167.1, E-value 3.2e-47" FT /inference="protein motif:Pfam:PF00497" FT misc_feature 1264843..1264884 FT /note="PS00213 Lipocalin signature." FT /inference="protein motif:ProSite:PS00213" FT CDS 1265001..1266209 FT /transl_table=11 FT /locus_tag="CBO1152" FT /product="putative peptidase" FT /db_xref="GOA:A5I0Z3" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="InterPro:IPR017439" FT /db_xref="UniProtKB/TrEMBL:A5I0Z3" FT /protein_id="CAL82704.1" FT /translation="MNSKIKNIAKEIQASLIEIRRNFHEIPELAFEEYHTSEMILEQLK FT KMKGMEILTGYAGGTGIVGILQGKKGKSDQCLMIRADIDALPIEENNELSYCSKEKGKM FT HACGHDAHITWTLGAAMILTQLREEFAGTVKFIFQPAEETGSGARKMVEEHVLENPKVH FT IALGAHGFPQYDTGKIIIPKKNAFSAARTLFIKVIGKGGHGSWPQDCVDPIAVANHIYM FT SLQQIISRRIKPGDASVLTVGSIHAGPMDKGNIIPNECVLKGTLRHVTMEGMESMVTWV FT KEISNHIAKANGAKVIVKCSHGVEPVVNDEACSVIFKHSAEEIVGKNNVAILEEDNLGG FT EDFYHYSKKVKSVYFFVGCAPKDKVGSFSLHSSDFCIDESILGNVSAILANAAICFLMK FT NYI" FT misc_feature 1265037..1266188 FT /note="Pfam match to entry PF01546 Peptidase_M20,Peptidase FT family M20/M25/M40, score 282.8, E-value 4.7e-82" FT /inference="protein motif:Pfam:PF01546" FT CDS 1266284..1267330 FT /transl_table=11 FT /locus_tag="CBO1153" FT /product="putative iron ABC transporter, solute-binding FT lipoprotein" FT /db_xref="GOA:A5I0Z4" FT /db_xref="InterPro:IPR001188" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:A5I0Z4" FT /protein_id="CAL82705.1" FT /translation="MKKLRLIISVFLIGILTLGLVACGSKKEESKNAEEKKDLKGSTIK FT IIATSEDYKSVFEKFTKETGIKVEFLSMSSGEVISRIKAEGGKPMADVWFGGGLDAFMD FT AKDSGLLEKYIPEESKDIKEEYKDKEGYWMGKGLTIVGFLVNKDVLKEKNLQVPKNWDD FT LVKPEYKNEILMSNPAISGTNYAVVNALLQQKGKDEGWKYFENLNKNISYYSKRGKDPK FT LKTTAGEVAIGITYIDNSIVKLEKEKNMQVIYPQDGIPWVVEGMAIFKNASNLEGAKIF FT ENWVLKRETQEELAKIDGKDGAMLVKPGIKGIDLKVPKDKLMKEDLSSFGKDRKEILDK FT WKDIAGNK" FT sig_peptide 1266284..1266371 FT /locus_tag="CBO1153" FT /note="probabilty 1.000, with cleavage site probability FT 0.448 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1266302..1266355 FT /note="1 probable transmembrane helix predicted for CBO1153 FT by TMHMM2.0 at aa 7-24" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1266308..1267159 FT /note="Pfam match to entry PF01547 SBP_bac_1, Bacterial FT extracellular solute-binding protein, score 68.3, E-value FT 1.8e-17" FT /inference="protein motif:Pfam:PF01547" FT misc_feature 1266320..1266352 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1267332..1269020 FT /transl_table=11 FT /locus_tag="CBO1154" FT /product="putative iron ABC transporter, permease protein" FT /db_xref="GOA:A5I0Z5" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I0Z5" FT /protein_id="CAL82706.1" FT /translation="MNRKKLRVSNKLDTQFYNILDKILIVFIILLVLLFIFWPIICVIK FT ESFLKDGNFTLNLYKDIFKNNEKLIYNSLFVSCMCTIFTTLISISIAFYASFSSSRIRK FT IITVTLMLTMISPPFVSSLAYINLFGRRGFITHEILKLTFNTYGWQGIVIMETLGLISM FT SSLLLIGIIGGIDKNFIDASLDLGGGFNYTLIRIVLPIIKPGIIVSALLAFVRSLSDFG FT TPMIIGGSFQVLATEVYMNIIANGNFGMAAAMSVLILIPSLIAFLIYRFYMSKFEIFSK FT DSKKLFLEGYEYKIKGVSAIILKVITYLFLLIMIMQYISIFLSAITKYKFNKMFFTLDN FT IRRIYNYNLSSFGRSIVYSLITGLIGSLLGILISYYVDRRKVIGGELIDFISTLPYIIP FT GTFLGIGYIFAFNKYPLEFTGTSFIVITNCIFKQIPMTTKMSSAVLSGVDLQTEEAAKD FT LGAPNIFIIKDIILPMLKPAFLVGFINNFTSTMTTIGAIIFLIYPGQKVATVEMFDAIQ FT SGEYGVGSAMASLIIITTLIINILFTKLIIGGNYVSKDKQFGQSF" FT misc_feature order(1267398..1267466,1267542..1267610,1267653..1267721, FT 1267782..1267850,1267908..1267976,1267995..1268063, FT 1268076..1268144,1268244..1268312,1268394..1268462, FT 1268499..1268567,1268766..1268834,1268892..1268960) FT /note="12 probable transmembrane helices predicted for FT CBO1154 by TMHMM2.0 at aa 23-45, 71-93, 108-130, FT 151-173,193-215, 222-244, 249-271, 305-327, 355-377, FT 390-412,479-501 and 521-543" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1267539..1268165 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 28.1, E-value 2.1e-05" FT /inference="protein motif:Pfam:PF00528" FT misc_feature 1268385..1268984 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 46.8, E-value 5e-11" FT /inference="protein motif:Pfam:PF00528" FT misc_feature 1268664..1268750 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 1268983..1269918 FT /transl_table=11 FT /locus_tag="CBO1155" FT /product="putative iron ABC transporter, ATP-binding FT protein" FT /db_xref="GOA:A5I0Z6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR008995" FT /db_xref="InterPro:IPR013611" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I0Z6" FT /protein_id="CAL82707.1" FT /translation="MYLKINNLVKVFNNIKVVDNINLELEKGKLLCLLGPSGCGKTTTL FT KIIGGFLKQDKGNILIENEDISKIPPENRPVSTVFQSYALFPHMNVIENIIYGLKFKGY FT RKKEAFKKGEEYLEIIGLSEFKDKKISKLSGGQQQRVALARALIVNPKILLLDEPLSNL FT DAKLRIKMRKEIKEIQSKFNMTMIFVTHDQEEALSIADYLAVMNKGELIQVGTPEEIYK FT NPKNEFVASFIGHINKVNINNKTELIRPEQITINKSQGDKKGRIKYKQFLGSYVNYFIE FT TKDETIIVQDSNSKNGVFKEGENIYINFSN" FT misc_feature 1269064..1269609 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 227.2, E-value 2.4e-65" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1269085..1269108 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1269379..1269423 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS complement(1269983..1270777) FT /transl_table=11 FT /locus_tag="CBO1156" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0Z7" FT /protein_id="CAL82708.1" FT /translation="MFCSNCGNKLSEDAQFCTNCGSPVLGNKPTNFKDGKAKNEFTNFL FT NFFINSLKNPVDKFNESIKNMSLSMVSLYFIILTLISGLITSFSIKKFISDFIAFFSSF FT IDNALSFHERAVLSTEIQGMISKMIPVSKLLFWYILGIVLFYGLIILIMYVIVTLIMKK FT QIKFESYLKVSLISLVIYSNFTVLAVIVAFLSFILSMLIYSLAHILVIVVLYNGFKNIM FT EDDSKTPYIFSFSYIIATNLSYYFIFKSIMQYYLMAIKNNII" FT misc_feature complement(order(1270034..1270087,1270124..1270192, FT 1270202..1270270,1270307..1270375,1270508..1270576)) FT /note="5 probable transmembrane helices predicted for FT CBO1156 by TMHMM2.0 at aa 68-90, 135-157, 170-192, 196-218 FT and 231-248" FT /inference="protein motif:TMHMM:2.0" FT CDS 1271081..1272247 FT /transl_table=11 FT /locus_tag="CBO1157" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I0Z8" FT /protein_id="CAL82709.1" FT /translation="MSYCEKCGTKLEDRDNFCKKCGTKVIKEHPKEKILEEITLEKENT FT SEEMDKPKEENNIDESTIVINSEDVHNELEKTYETMVKEKNKKSFSKGNYDEMEDVDFE FT EDDEDYGNKNKKILVFASIFIVVICFITAFLFKDNIMCNHYIKKASKEMSETEKIRNYN FT KALGYKYKDEIVNEIYETVKNTVDFEEKLSGVYKLKEGDRKKILNKVFIYKANDSFQKE FT SYEECAKLLEKAKKSGYNIKDFPKYNELLTKLNTEDKKQFEDNSSGQYTYKNSNPTIGE FT SYVNSLGNVYYKDHNEYNNLQGYIIPQSNQRYLTEDELKNYDKYTLDLIRNEIYARYGY FT AFKEEPFKSYFSNKNWYVKDESFKGLDSELNEHELKNIKLLLELSSKK" FT misc_feature 1271429..1271488 FT /note="1 probable transmembrane helix predicted for CBO1157 FT by TMHMM2.0 at aa 117-136" FT /inference="protein motif:TMHMM:2.0" FT CDS 1272664..1273809 FT /transl_table=11 FT /gene="rpsA" FT /locus_tag="CBO1159" FT /product="30S ribosomal protein S1" FT /db_xref="GOA:A5I0Z9" FT /db_xref="InterPro:IPR000110" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:A5I0Z9" FT /protein_id="CAL82710.1" FT /translation="MKDMMEEINSSMKRIHKGELLKGKVISVSDKEAVLNIGYISDGIL FT PKKEVVDNEEVNLKDIISKDDVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKN FT EEILEIKVEEIIKGGAIGHIQGIRVFIPASQIDNKYVKDLNVFKGEMVKGRLIELDKQK FT RKIVLSSRVVKEEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDIGGMDGLVHNSQ FT LSWGRVNHPSEVVSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIE FT GTIVKLLNFGAFVEVENGIEGLVHISEITDEHIAKPSEKLNIGDKVKVKVLEVNSDEKR FT MSLSIKEATEKPKEDFSKYDDSKEEDVTLGDLFGDKFKDLF" FT misc_feature 1272703..1272924 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 28.7, E-value 1.4e-05" FT /inference="protein motif:Pfam:PF00575" FT misc_feature 1272964..1273176 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 34.8, E-value 2.1e-07" FT /inference="protein motif:Pfam:PF00575" FT misc_feature 1273225..1273443 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 109.0, E-value 9.8e-30" FT /inference="protein motif:Pfam:PF00575" FT misc_feature 1273480..1273701 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 109.0, E-value 9.7e-30" FT /inference="protein motif:Pfam:PF00575" FT CDS 1273992..1274411 FT /transl_table=11 FT /locus_tag="CBO1160" FT /product="putative thioesterase" FT /db_xref="GOA:A5I100" FT /db_xref="InterPro:IPR006683" FT /db_xref="InterPro:IPR006684" FT /db_xref="UniProtKB/TrEMBL:A5I100" FT /protein_id="CAL82711.1" FT /translation="MYINRTETTVRYVETDQMGVVHHSNYYPWFEMGRTEFTKATGMKY FT TDIENIGVMMPLTESYCKYIKPAKYEDEIVIETSIEKLTPIKIIFSYKVIKKENNELLA FT KGNTTQAFVDKNTFRVMNLKQCNEELWNKLMELCK" FT misc_feature 1274013..1274303 FT /note="Pfam match to entry PF03061 4HBT, Thioesterase FT superfamily, score 44.0, E-value 3.4e-10" FT /inference="protein motif:Pfam:PF03061" FT CDS 1274583..1274999 FT /transl_table=11 FT /locus_tag="CBO1161" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR015111" FT /db_xref="UniProtKB/TrEMBL:A5I101" FT /protein_id="CAL82712.1" FT /translation="MKIQSEKVAKASVKMAISSREEEKILIEKFKAEDILTTAVDVGGN FT INSSMTKIIERALVASKRCGLIKDCHVDDGAVVGATREALLQIMEKANGLNVGGKIGIA FT RSEEHISVCIFMSIGLLHLNEVVIGLGHRSIPNI" FT CDS 1275868..1276875 FT /transl_table=11 FT /locus_tag="CBO1162" FT /product="putative ABC transporter, substrate-binding FT lipoprotein" FT /db_xref="InterPro:IPR007487" FT /db_xref="UniProtKB/TrEMBL:A5I102" FT /protein_id="CAL82713.1" FT /translation="MVVKRKISILLALIFSVAIFGGCSKISSAKTLKDKKVINIGIAQI FT IEHPALDLAKKGFVDRLAEKGFKDGENIKIDFQNAQGDMATIQTITQNFVAQRSDIIYA FT IATPSVQAAFNATKKIPIVMTAITDPVESGVVKSLDKSGTNVAGTSDKISIEENFKLIK FT EILPGKKTIGILYNTSEKNSEIQVRQAEEKAKKFGFKIVKKGITNVNDIHQSLASILNQ FT IDIMFIPTDNTVASSMPFISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESAD FT VAIEIINGKNPKDMKVKFMKETKLSINPEVAKKLNIKIPQDIEDKAEKIKGGKK" FT sig_peptide 1275868..1275952 FT /locus_tag="CBO1162" FT /note="probabilty 1.000, with cleavage site probability FT 0.969 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1275904..1275936 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1275982..1276860 FT /note="Pfam match to entry PF04392 DUF534, Protein of FT unknown function (DUF534), score 313.6, E-value 2.5e-91" FT /inference="protein motif:Pfam:PF04392" FT CDS 1276875..1277780 FT /transl_table=11 FT /locus_tag="CBO1163" FT /product="putative ABC transporter, permease protein" FT /db_xref="GOA:A5I103" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:A5I103" FT /protein_id="CAL82714.1" FT /translation="MDILLAVLEQGFIFSIVCFGVYITYKILDFPDLSVDGTFPLGAAV FT AAAFLVKGYSPVLSSLAALVAGAIAGGITGILHVKFKITNLLSGILVMVGLYSINLRIM FT GKSNIPLFNKIHLFSDTMNPIIIITVFLLICKITLDLFLKTKAGFILKATGDNEQLVLS FT LGVNKDLVKIMGLMLSNALVALGGALMAQYQGFSDVGMGTGIVVMGLASVIIGESLFGR FT IKALNATTRVLLGALVYKLSVSIALTVGLAPTDLKLVTAIIVVIALSLNKNPLKIITKQ FT KTKEGGILNASNTKSAQSVQ" FT misc_feature 1276881..1277678 FT /note="Pfam match to entry PF02653 FT BPD_transp_2,Branched-chain amino acid transport system / FT permease component, score 89.7, E-value 6.1e-24" FT /inference="protein motif:Pfam:PF02653" FT misc_feature order(1276881..1276949,1277043..1277111,1277130..1277189, FT 1277247..1277303,1277391..1277459,1277469..1277537, FT 1277568..1277636,1277646..1277699) FT /note="8 probable transmembrane helices predicted for FT CBO1163 by TMHMM2.0 at aa 3-25, 57-79, 86-105, FT 125-143,173-195, 199-221, 232-254 and 258-275" FT /inference="protein motif:TMHMM:2.0" FT CDS 1277743..1278537 FT /transl_table=11 FT /locus_tag="CBO1164" FT /product="putative ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I104" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I104" FT /protein_id="CAL82715.1" FT /translation="MLQIQNLHKVFNKDTVNENNLFNNLNLDVKAGDFITIIGSNGAGK FT STLLNMISGSIKPDQGKINLEDKDITFSKEYEVSKYIGRVFQDPSKGTAPSMTILENMS FT MAENKGKRFGLTLGVNKKKTSKFIDILKELNLGLEDKLNVTVGALSGGQRQALSLIMTA FT MNRPKVLLLDEHTAALDPKTSKRIIEISEKIIEEENITALMVTHDLNQAINVGNRLIMM FT HKGKVVLDIKEEEKKSLTKEKLLKCFENLNIEDGLSDRTLFS" FT misc_feature 1277836..1278417 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 178.3, E-value 1.3e-50" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1277857..1277880 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1278187..1278231 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1278867..1279169 FT /transl_table=11 FT /locus_tag="CBO1165" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I105" FT /protein_id="CAL82716.1" FT /translation="MLRLIYITVYGGMCLFMLYCAYSSIVKKKIKIYVGEHRKITYKEK FT LSKALGINYLFLSICFFIYAVLLFLNKTPKYPIFTMAFIVLFMTPFILVNKYTKN" FT misc_feature order(1278876..1278944,1279002..1279070,1279098..1279151) FT /note="3 probable transmembrane helices predicted for FT CBO1165 by TMHMM2.0 at aa 4-26, 46-68 and 78-95" FT /inference="protein motif:TMHMM:2.0" FT CDS 1279602..1281245 FT /transl_table=11 FT /gene="asdA" FT /gene_synonym="aspD" FT /locus_tag="CBO1166" FT /product="L-aspartate beta-decarboxylase" FT /EC_number="4.1.1.12" FT /db_xref="GOA:A5I106" FT /db_xref="InterPro:IPR004838" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR022518" FT /db_xref="UniProtKB/TrEMBL:A5I106" FT /protein_id="CAL82717.1" FT /translation="MDNPNIQRIELEHIYGKISPFELKDRLISLAKESQIEKSAHALLD FT AGRGNPNWTAAAPREAFFAFGQFAVEETRRVWSDGALAGMPKKEGIYKRFREYIEKHKR FT EPGIELLNNIVHYGIEVKGFDEDCFVYELADGIIGDNYPVPDRMLIHIEKVVQDYLMQE FT MCYNKPLKGEFNLFAVEGATAAMCYIFDSLIANELLQRGDRIALMTPIFTPYLEIPLIP FT RYNFEVVKISATETKEDGTHTWQYPDEELEKLRDSSIKALFVVNPSNPPSVAIKSDSIN FT KIVQIVNESNPNLMIISDDVYGTFVDEFRSLVADLAFNTIGVYSFSKYFGVTGWRLGTI FT ALYEGNVFDKLIRELSEEKKEALRKRYGALSTNPEEILFIDRIVADSRQVALNHTAGLS FT TPQQVQMAFFSVFAILDKENKYKQLTQQICRRRQKLLYEGLGIKFEREENDASYYTEFD FT LLQWAHCNYGEDFGAYLEKNYKPVDILLRLAEKSSIVLLGGGGFHGPEWSIRISLANLN FT DEAYSKIGKVLHNVLDEYVKEWKCYKNSQK" FT misc_feature 1280346..1280615 FT /note="Pfam match to entry PF00155 FT aminotran_1_2,Aminotransferase class I and II, score 49.7, FT E-value 9.8e-14" FT /inference="protein motif:Pfam:PF00155" FT misc_feature 1280574..1280615 FT /note="PS00105 Aminotransferases class-I FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00105" FT repeat_region complement(1281301..1281335) FT CDS complement(1281371..1282252) FT /transl_table=11 FT /locus_tag="CBO1167" FT /product="putative membrane protein" FT /db_xref="GOA:A5I107" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:A5I107" FT /protein_id="CAL82718.1" FT /translation="MKDSRIYFLMILSTLFWGGAFIAAKLSAPFIPPFTLTFLRFLIAT FT LVLFFIIMIKEKSIYKLKKEDIPVFLFTGIVGMVGYHIFFFKASTYTTATNSSLIAASN FT PIITCILSVIFLKDKLSSKGIIGIILSFTGVLLTITNGAIANILNINFNKGDILMIIAV FT LCWASYGVFSKKVMPRYSPMTLTFYSFLFCTLFLIPFVIYEKPLSLINKVPYYSYISIL FT YMSIFASVIGYLVQQISIKQIGPSKTSIFVNLVPISSIVLSSMILGEKITIITLLSTAL FT IIAGVYICQKSN" FT misc_feature complement(1281380..1281763) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 114.4, E-value 2.3e-31" FT /inference="protein motif:Pfam:PF00892" FT misc_feature complement(order(1281389..1281442,1281452..1281511, FT 1281548..1281616,1281644..1281700,1281737..1281790, FT 1281818..1281886,1281905..1281958,1281995..1282054, FT 1282091..1282153,1282181..1282234)) FT /note="10 probable transmembrane helices predicted for FT CBO1167 by TMHMM2.0 at aa 7-24, 34-54, 67-86, FT 99-116,123-145, 155-172, 185-203, 213-235, 248-267 and FT 271-288" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1281833..1282210) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 112.9, E-value 6.3e-31" FT /inference="protein motif:Pfam:PF00892" FT repeat_region complement(1282660..1282718) FT /note="intergenic repeat 1" FT CDS 1282835..1283932 FT /transl_table=11 FT /locus_tag="CBO1168" FT /product="putative sugar kinase" FT /db_xref="GOA:A5I108" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR007342" FT /db_xref="InterPro:IPR011611" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I108" FT /protein_id="CAL82719.1" FT /translation="MTNREKEVLEVIKENPMISQKDLAEKLGITRSSAAVHITNLLKKG FT YLLGKGYIVSKDEEYVSIIGGANMDIQGFPNDKLIYKDSNPGKSKISLGGVGRNIGENL FT TKLGINTKLITALGEDIYGNKILEEAKTIGMDMEHSIIMREDTTSTYLSILDETGDMMV FT AIAHMDIFDKMPLDFIKSKKIVIENSGVCIIDTNIPQEIIEYIVNNHQNVKFFLDTVST FT TKAKKVKNIIGKFHTIKLNRIEAEILSGIPIKKEEDLERSAEFFLEKGVKRVFITLGEE FT GVYYNDRKNKNKIPTPKVRVINATGAGDAFMAAMVYCYLKDFSVEETIKFSMTASILAL FT SHEDTINPNMSVWSINNKMKEIGIC" FT misc_feature 1282886..1282951 FT /note="Predicted helix-turn-helix motif with score FT 1923.000, SD 5.74 at aa 18-39, sequence FT ISQKDLAEKLGITRSSAAVHIT" FT misc_feature 1283012..1283890 FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 143.3, E-value 4.5e-40" FT /inference="protein motif:Pfam:PF00294" FT CDS 1283926..1284849 FT /transl_table=11 FT /locus_tag="CBO1169" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I109" FT /db_xref="InterPro:IPR007342" FT /db_xref="InterPro:IPR022830" FT /db_xref="UniProtKB/TrEMBL:A5I109" FT /protein_id="CAL82720.1" FT /translation="MLEKYLEISKEVSEALKENKPVVALESTIISHGMPYPKNAETALN FT VEKIIRDKGAIPATIAILNGKLKVGLTKDEIEYLGKKGKEVVKTSRRDIPFILAKKLDG FT ATTVASTMIVANLAGIKVFGTGGIGGVHRGAQESFDISADLQELANTDVAVVCAGAKSI FT LDIGLTLEYLETQGVPVVGFGTEELPAFYTRKSGFKVDYKVDTAKELAEALKAKWDLGL FT KGGMVVGNPIPEEYQMNYDTITKAINDAVKEAEEKGIKGKESTPFLLAKVKDITKGKSL FT EANIQLVYNNVAVASDLAIELSKLNK" FT misc_feature 1283953..1284831 FT /note="Pfam match to entry PF04227 FT Indigoidine_A,Indigoidine synthase A like protein, score FT 664.9, E-value 4.2e-197" FT /inference="protein motif:Pfam:PF04227" FT CDS 1285341..1286252 FT /transl_table=11 FT /gene="panE" FT /locus_tag="CBO1170" FT /product="putative 2-dehydropantoate 2-reductase" FT /EC_number="1.1.1.169" FT /db_xref="GOA:A5I110" FT /db_xref="InterPro:IPR003710" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR013332" FT /db_xref="InterPro:IPR013752" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5I110" FT /protein_id="CAL82721.1" FT /translation="MKIAIVGSGAMGSLYGAYLHKSGEEVYLINKWKEHINTINEVGLV FT IEEGDKKLKFYPKAVTNSKDIGIVDLAIVFVKSTKTEEAILENKNIIGENTYVLTLQNG FT YGNGEKIEKYINKNRIIVGTTGEGCTTIKAGYIKHAGSGDTYIGMFSGKEDNILKRLEN FT ILNNSGFNAHICKDPRELIWDKLIINIGINAITAILGIKNGEILKEMVTKKIMKDAVIE FT AVKVANAKGLSFNEEEMIKKVENVALKTAENKSSMLQDVLNNKKTEIENINGAIVKEGS FT KFNIKTSVNETLTNLIISLEKK" FT misc_feature 1285473..1286246 FT /note="Pfam match to entry PF02558 ApbA, Ketopantoate FT reductase PanE/ApbA, score 204.8, E-value 1.4e-58" FT /inference="protein motif:Pfam:PF02558" FT CDS 1286555..1287187 FT /transl_table=11 FT /gene="fchA" FT /locus_tag="CBO1171" FT /product="methenyltetrahydrofolate cyclohydrolase" FT /EC_number="3.5.4.9" FT /db_xref="GOA:A5I111" FT /db_xref="InterPro:IPR007044" FT /db_xref="UniProtKB/TrEMBL:A5I111" FT /protein_id="CAL82722.1" FT /translation="MLDKSCKEFIDILSSKEPVPGGGGACAYVGALGMALGNMVANLTM FT GKKKYKDVEEDVKEILEEGEILIQKLEELVNKDAEVFYPLSKAYGLPKNTEEEKAYKDK FT IMEEALYNASLVPLEIAKCAAETIDLHYKLARIGTRIAISDVGVGVLFCKTALEASKLN FT VYINTGMMKNNDIKNSLEEEINTLVSKYSTKADKVYSYVENLIRGNE" FT misc_feature 1286654..1287172 FT /note="Pfam match to entry PF04961 FT FTCD_C,Formiminotransferase-cyclodeaminase, score 87.1, FT E-value 3.6e-23" FT /inference="protein motif:Pfam:PF04961" FT CDS 1287187..1288035 FT /transl_table=11 FT /locus_tag="CBO1172" FT /product="putative methylenetetrahydrofolate dehydrogenase" FT /EC_number="1.5.1.5" FT /db_xref="GOA:A5I112" FT /db_xref="InterPro:IPR000672" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020630" FT /db_xref="InterPro:IPR020631" FT /db_xref="UniProtKB/Swiss-Prot:A5I112" FT /protein_id="CAL82723.1" FT /translation="MAKILYGNEVALKIKEDLNLRIDKLKEKNIIPKLAILRMGNKPDD FT IAYERSIIKSCEKLNIETKVEELNEDILEEDFLKLMESLNNEKEIHGILVFRPYPKHLN FT ENIINSSIALNKDVDCMHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKNIVI FT INRSMVVGKPLSMMVLSHNATVTICHSRTIDLPSITKKADIVVTAIGKAKLIKEEYFNE FT DSIVMDVSINIDENGKLCGDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAERN FT S" FT misc_feature 1287187..1287543 FT /note="Pfam match to entry PF00763 FT THF_DHG_CYH,Tetrahydrofolate dehydrogenase/cyclohydrolase, FT catalytic domain, score 91.6, E-value 1.7e-24" FT /inference="protein motif:Pfam:PF00763" FT misc_feature 1287547..1288032 FT /note="Pfam match to entry PF02882 FT THF_DHG_CYH_C,Tetrahydrofolate FT dehydrogenase/cyclohydrolase,NAD(P)-binding domain, score FT 268.1, E-value 1.2e-77" FT /inference="protein motif:Pfam:PF02882" FT CDS 1288355..1289149 FT /transl_table=11 FT /locus_tag="CBO1173" FT /product="putative hydrolase" FT /db_xref="GOA:A5I113" FT /db_xref="InterPro:IPR000150" FT /db_xref="InterPro:IPR006379" FT /db_xref="InterPro:IPR013200" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:A5I113" FT /protein_id="CAL82724.1" FT /translation="MIKFIATDLDGTLVNSEGKIYNKVFNLINDLHKNGVKFAAASGRF FT YSQLNENFNSVKEDMILIAHNGALIKYSKNGQTLYANYIDKEYIKSVEKLKRNFGEELI FT LAGENEAFVVNPSQSIKEEFNFYNVPYIEYKSFDEVDKPVQKISYYVKDGIKASMIDYL FT KENLNKNLQFVASGDKWIDMMNKEVSKGHAIKILQKKFNIEKDNTMVFGDYYNDITMFK FT QAYYSYAMENAPEDVKEKANFIAGNNNENAVYKTISKHMGFI" FT misc_feature 1288358..1289056 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 19.3, E-value 0.00069" FT /inference="protein motif:Pfam:PF00702" FT misc_feature 1288364..1288399 FT /note="PS01228 Hypothetical cof family signature 1." FT /inference="protein motif:ProSite:PS01228" FT CDS complement(1289376..1289882) FT /transl_table=11 FT /locus_tag="CBO1174" FT /product="putative acetyltransferase" FT /db_xref="GOA:A5I114" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:A5I114" FT /protein_id="CAL82725.1" FT /translation="MNLFFKDITIDNFYDSILLSTNNNDNHYVFEEFVDSVAFSIAISK FT IEPKLRPKVIFVEEDMVGFTLYGYCEMEKHYKVWTLLIDHKFQGKGFGKAALNKIIEEL FT KNNKDCNEIYLNFHPKNIKAKKLYESLGFRYTGEKIWINKKLYEDVYSEIYEGINYELL FT YKLSL" FT misc_feature complement(1289481..1289726) FT /note="Pfam match to entry PF00583 FT Acetyltransf,Acetyltransferase (GNAT) family, score 56.5, FT E-value 5.9e-14" FT /inference="protein motif:Pfam:PF00583" FT CDS 1290315..1291055 FT /transl_table=11 FT /locus_tag="CBO1176" FT /product="putative membrane protein" FT /note="no significant database matches." FT /db_xref="UniProtKB/TrEMBL:A5I115" FT /protein_id="CAL82726.1" FT /translation="MKRLDTKNININITKILVGLNLIIYLFILSVDFLKIKNLYKYSTN FT IKFISIVICFVITLFIGKNIYDKKDLFILRLALFFTVLADFNMLILEKFKLGILFFIIV FT QSLYIIRHGRFKDVNGKVRFKYRDIYMFVFCLFLFIILKRLNLFSKESTLLSMAFIYAL FT LLIHSLIRAYGTFNNNFFEKKTCKIISIGITLFFLCDLNVAFSNISFYLLSIKHVENLE FT NVFLPLIWFFYLPSQILLSLSGEK" FT misc_feature order(1290339..1290407,1290450..1290509,1290528..1290587, FT 1290600..1290653,1290690..1290758,1290771..1290839, FT 1290876..1290944,1290987..1291046) FT /note="8 probable transmembrane helices predicted for FT CBO1176 by TMHMM2.0 at aa 9-31, 46-65, 72-91, FT 96-113,126-148, 153-175, 188-210 and 225-244" FT /inference="protein motif:TMHMM:2.0" FT CDS 1291175..1291984 FT /transl_table=11 FT /locus_tag="CBO1177" FT /product="putative zinc transporter" FT /db_xref="GOA:A5I116" FT /db_xref="InterPro:IPR003689" FT /db_xref="UniProtKB/TrEMBL:A5I116" FT /protein_id="CAL82727.1" FT /translation="MTWFKELNPIMQALLATLFTWAVTALGASLVFFFKNINKKVLNAM FT LGFAAGVMIAASYWSLLAPAIEMAESQGKIAWIPAAVGFLAGGIFLRIVDRILPHLHLG FT KDRDEAEGIKTSWQKSILLVLAITLHNIPEGLAVGVAFGAVGANIESASLAGAIALALG FT IGIQNFPEGAAVSIPLRREGNSRLKSFWYGQASGIVEPIAGVIGAAAVLFIRNLLPYAL FT SFAAGAMIFVVVEELIPEAQEGKDTDISSIGVLIGFTVMMILDVALG" FT misc_feature 1291202..1291969 FT /note="Pfam match to entry PF02535 Zip, ZIP Zinc FT transporter, score 100.4, E-value 3.8e-27" FT /inference="protein motif:Pfam:PF02535" FT misc_feature order(1291217..1291276,1291295..1291354,1291397..1291456, FT 1291808..1291876,1291919..1291978) FT /note="5 probable transmembrane helices predicted for FT CBO1177 by TMHMM2.0 at aa 15-34, 41-60, 75-94, 212-234 and FT 249-268" FT /inference="protein motif:TMHMM:2.0" FT repeat_region complement(1291982..1292200) FT /note="intergenic repeat 1" FT CDS 1292656..1293093 FT /transl_table=11 FT /locus_tag="CBO1178" FT /product="putative transcriptional regulator" FT /db_xref="InterPro:IPR000944" FT /db_xref="UniProtKB/TrEMBL:A5I117" FT /protein_id="CAL82728.1" FT /translation="MKISTKGKYGIKAIIDLAINSTEEAVTLKSISERQNISEGYLEQI FT FSLLRKNNLIKGIKGAQGGYILEKDSAHITAGEILRALEGDLSVVELNDDYLNNRMEKS FT IKTNLWDRINESIERVVDSITLEDLVEAYKKSDNQNIMYYI" FT misc_feature 1292656..1293018 FT /note="Pfam match to entry PF02082 Rrf2, Transcriptional FT regulator, score 124.2, E-value 2.5e-34" FT /inference="protein motif:Pfam:PF02082" FT misc_feature 1292731..1292796 FT /note="Predicted helix-turn-helix motif with score FT 1260.000, SD 3.48 at aa 26-47, sequence FT VTLKSISERQNISEGYLEQIFS" FT CDS 1293422..1294351 FT /transl_table=11 FT /gene="cysK2" FT /locus_tag="CBO1179" FT /product="cysteine synthase 2" FT /EC_number="2.5.1.47" FT /note="Also similar to CBO0205 (53.5 38d)." FT /db_xref="GOA:A5I118" FT /db_xref="InterPro:IPR001216" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR005856" FT /db_xref="InterPro:IPR005859" FT /db_xref="UniProtKB/TrEMBL:A5I118" FT /protein_id="CAL82729.1" FT /translation="MKKIYKNITELIGNTPLLELEKLKKENKLKANIIAKVEYFNPANS FT VKDRIAFSMIEEAEKEGLIDKDTVIIEPTSGNTGVGLAFVAAAKGYKLILTMPETMSME FT RRLILKAYGAELVLTPGKDGMKGAIEKATELSKEYKNSFVPQQFENKFNPAMHKRTTAV FT EIWNDTDGEVDIFIAGVGTGGTITGVGEYLKEKNKDIKIIAVEPEDSPVLSGGNPGPHK FT IQGIGAGFVPSTLNTEVLDEIFKVSNEKAFEVTKSIAKTEGLLVGISSGAAIYAAMKIA FT ERQENQGKNIVVLLPDTGQRYLSTGVFE" FT misc_feature 1293443..1294315 FT /note="Pfam match to entry PF00291 PALP,Pyridoxal-phosphate FT dependent enzyme, score 426.8, E-value 2e-125" FT /inference="protein motif:Pfam:PF00291" FT misc_feature 1293527..1293583 FT /note="PS00901 Cysteine synthase/cystathionine FT beta-synthase P-phosphate attachment site." FT /inference="protein motif:ProSite:PS00901" FT CDS 1294396..1295064 FT /transl_table=11 FT /locus_tag="CBO1180" FT /product="putative cystine ABC transporter, permease FT protein" FT /db_xref="GOA:A5I119" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:A5I119" FT /protein_id="CAL82730.1" FT /translation="MEIFDAKYLVQSLIVLLKYAHITLSIAILSMIIAVLFGVILAVIR FT MYKVKVLHSISEIYISFFRGTPILIQLFLFYYGLPQIIPAFKEIPAYMAVVIALSMNGS FT AYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRIILPQAARIAIPSLGNSFIDLLKS FT SSLAFTVGVAEILSKAQMNAASSYRFFESYLAVALIYWVMVELFNFMQKLLERKIGKAY FT " FT misc_feature 1294441..1295055 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 117.7, E-value 2.2e-32" FT /inference="protein motif:Pfam:PF00528" FT misc_feature order(1294459..1294527,1294564..1294632,1294660..1294728, FT 1294960..1295028) FT /note="4 probable transmembrane helices predicted for FT CBO1180 by TMHMM2.0 at aa 22-44, 57-79, 89-111 and 189-211" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1294738..1294824 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 1295099..1295923 FT /transl_table=11 FT /locus_tag="CBO1181" FT /product="putative cystine ABC FT transporter,substrate-binding protein" FT /db_xref="GOA:A5I120" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:A5I120" FT /protein_id="CAL82731.1" FT /translation="MNIKKFKKIFLSMSLVVALGVALTACAQKNKEIKENKNTIKIGTS FT GQYYPFTFIDKDSNKVQGFEIDIWEEIGKRTGYKPEFKVADWTGIMGMLDTGKIDTVAN FT EITVTDKKKEKYYFSKPYVYSGVQLATKKGNNNIKSLKDLEGKSVATQVGTNYSQSIED FT HNNKNKGEDIKTKQYNSFSGMFQDVDLGRVDALIEDKLACLVNIKKSGLNLQLAGEPIE FT EMENAYPFVKKDENKEKIEKINKALDDMKNDGTLQNISKKWFGENVTEKSKK" FT sig_peptide 1295099..1295177 FT /locus_tag="CBO1181" FT /note="probabilty 1.000, with cleavage site probability FT 0.783 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1295144..1295176 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1295216..1295896 FT /note="Pfam match to entry PF00497 SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3, score FT 244.5, E-value 1.6e-70" FT /inference="protein motif:Pfam:PF00497" FT misc_feature 1295291..1295326 FT /note="PS01034 Glycosyl hydrolases family 16 active sites." FT /inference="protein motif:ProSite:PS01034" FT CDS 1296024..1297154 FT /transl_table=11 FT /gene="iscS" FT /locus_tag="CBO1182" FT /product="cysteine desulfurase" FT /EC_number="2.8.1.7" FT /db_xref="GOA:A5I121" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR016454" FT /db_xref="InterPro:IPR020578" FT /db_xref="UniProtKB/TrEMBL:A5I121" FT /protein_id="CAL82732.1" FT /translation="MRNKIYMDHAATTYIKKEVMDAMIPYLTEYYANPSSVYNMANNLR FT IAIDEAKEEIADFIGGESEEIFFTSGGTEGDNWAIKGIAYGNENKGKHIITSSIEHPAV FT LNSCKYLREKGFEITFLAVDGYGKIDLKELEESIREDTILVSIMTANNEIGTIQDIRSI FT GAICKAHKVLFHTDAVQALGQTSINVKEMNIDLMTITAHKIYGPKGIGALYIKKGTKID FT NLFHGGSQERGKRAGTENPAAIVGFKKAVSLLKEKGQEENKRIEKLRDKFIKGLLQIEG FT TKINGALGIERLKGNINVSFKNVDGELLLMLLDSQGICASAGSACSAGAVDASHVLLAL FT GLDKEFLKGTIRFTLGAKNTEEEIYFVLEKLKEIVK" FT misc_feature 1296066..1297124 FT /note="Pfam match to entry PF00266 FT aminotran_5,Aminotransferase class-V, score 350.9, E-value FT 1.4e-102" FT /inference="protein motif:Pfam:PF00266" FT misc_feature 1296603..1296662 FT /note="PS00595 Aminotransferases class-V FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00595" FT CDS 1297226..1298026 FT /transl_table=11 FT /locus_tag="CBO1183" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I122" FT /db_xref="InterPro:IPR005232" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR022310" FT /db_xref="UniProtKB/TrEMBL:A5I122" FT /protein_id="CAL82733.1" FT /translation="MNYKYNNLINYLKDLGSVAVAFSGGVDSTLLLKAAKEALGDNAIS FT ITVVSPYIPKWEIEEAKELANNIGIKSYFLEVPMLEEIRFNPEDRCYICKKGVFSKIKE FT LAKEKGVKYIVDGTNLDDTKDYRPGMRALKELDVKSPLLENSINKEEIRTLSKELGLET FT WNKPAYACLLSRIPYNQEIKEEDLSRIEKAEVYMMELGFRAVRVRSHGDLARIEVPKKE FT RVKLFNEDILDKVSEKFKKLGFKYVTVDTEGYKMGSLNTGINKN" FT sig_peptide 1298416..1298473 FT /gene="trmU1" FT /gene_synonym="asuE1" FT /gene_synonym="mnmA1" FT /locus_tag="CBO1185" FT /note="probabilty 0.627, with cleavage site probability FT 0.330 between residues 20 and 21" FT /inference="protein motif:SignalP:2.0" FT CDS 1298425..1299495 FT /transl_table=11 FT /gene="trmU1" FT /gene_synonym="asuE1" FT /gene_synonym="mnmA1" FT /locus_tag="CBO1185" FT /product="tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase" FT /EC_number="2.1.1.61" FT /note="Also similar to CBO2905 (64.2 38d.)." FT /db_xref="GOA:A5I123" FT /db_xref="InterPro:IPR004506" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR023382" FT /db_xref="UniProtKB/Swiss-Prot:A5I123" FT /protein_id="CAL82734.1" FT /translation="MKKKVLVGMSGGVDSSVAAYLLKEQGYEVIGVTMQIWQDDEEFIE FT KEGGCCSLSAVADARRVANKIGIPFYVMNFKDAFKRNVIDYFVDEYMEGRTPNPCIACN FT KFIKFSSFLDKAMAIGIDYVATGHYAIIEKHNDRYIIKKSEDDKKDQTYALYNLTQFQL FT ERTLMPCGQYKKSKIREIAKEIGLRVHNKKDSEEICFIPDNDHGRYIKNRFPNKVREGN FT FVDKQGNILGTHKGIVYYTIGQRKGLGIAFGKPMYVVDINPFRNEVVLGDLEDLLNTKL FT IAKDTNYIPFDTLKEPMEVEAKIRYSQTPSKAIITPIEDGRVRVNFHEKQRAITKGQSV FT VFYKDDLLIGGGIIEK" FT misc_feature 1298431..1299486 FT /note="Pfam match to entry PF03054 tRNA_Me_trans, tRNA FT methyl transferase, score 558.6, E-value 4.2e-165" FT /inference="protein motif:Pfam:PF03054" FT CDS 1299835..1300554 FT /transl_table=11 FT /locus_tag="CBO1186" FT /product="putative two-component response regulator" FT /db_xref="GOA:A5I124" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR007492" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:A5I124" FT /protein_id="CAL82735.1" FT /translation="MLRVMICEDNEVHRVKLKQIVENTILREKLDLDIVLATENPQEII FT SYIKENRSTGIYLLDVDLKNDINGIKLGEKIRELDPLGYIIFTTTHLEMSYLAFKYKVE FT AMDYVIKDDDDFKERVNSCIIKAYNRYHKQEHEEEYISIDTDTRIINIRPSDILFIETT FT GTPHKIRIHEENRQIEMYANLKDIQKKLPSNFYRCHKSYIVNKNKIEEIDKNHNKIIMK FT NEEECYVSFRYMRGLIV" FT misc_feature 1299838..1300218 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 52.1, E-value 1.2e-12" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 1300252..1300551 FT /note="Pfam match to entry PF04397 LytTR, LytTr DNA-binding FT domain, score 117.0, E-value 3.8e-32" FT /inference="protein motif:Pfam:PF04397" FT CDS 1300575..1301894 FT /transl_table=11 FT /locus_tag="CBO1187" FT /product="two-component sensor histidine kinase" FT /db_xref="GOA:A5I125" FT /db_xref="InterPro:IPR003594" FT /db_xref="UniProtKB/TrEMBL:A5I125" FT /protein_id="CAL82736.1" FT /translation="MFLHYTIIPSVLMSILCSISIYILYKNILSISDIKKYFIISFVAG FT MVLTTGSYTLILPILSVITIVQLKNNENEDKIKILITIYGVYFANTIYIFIYTFSGARL FT YNIPLKYTLIQFMIMLFIIVILCLIIKRIGSKKKRNKELSSSEIRFRMILIISTLLTVM FT IASIYIFTCTSIINNEKISFIMGNFVPEALPLISIILTSIIVYYYDKSVEYRVKLRREI FT EEKNQIEGYSHIIEDMYSETRRFKHDYINMLSPLKEYIDNEDIEGLSEFFYNNVIDMDK FT NIKWSNSNIDKLKYIKVPGLKAILSTKLIKASSMNIDINVHIVEDIDYIHMNIMDLCRI FT IGILMDNSIEAAGECEAPKICIVVANKNDYVVMAVHNNFFGDKPLIHKIYKEGFSTKGK FT GRGLGLYTVKNIIDIKYENVFLNTSIEGNVFIQEIWIKYI" FT misc_feature order(1300575..1300643,1300686..1300754,1300812..1300880, FT 1300908..1300976,1301034..1301102,1301130..1301198) FT /note="6 probable transmembrane helices predicted for FT CBO1187 by TMHMM2.0 at aa 9-31, 46-68, 88-110, FT 120-142,162-184 and 194-216" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1301568..1301891 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 24.0,E-value 0.00021" FT /inference="protein motif:Pfam:PF02518" FT repeat_region 1301942..1301972 FT CDS 1302267..1303190 FT /transl_table=11 FT /locus_tag="CBO1188" FT /product="putative ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I126" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I126" FT /protein_id="CAL82737.1" FT /translation="MKKKCLLSTHNLTKEYKNKKAVNNLNITVYEGDVYGFLGPNGAGK FT STTIKSIMGLIKPTSGKVIINGYDVEKDSEKAIEKIGTMVEAPSFYGGLSGYKNLILMA FT NLYGVPKKRVDEVLEMVRLTDSAHKNVSKYSLGMKQRLGIARAFLNNPNIVILDEPTNG FT LDPQGIKDIRELIQDLSKKYHVTFLISSHILSEIQAVCNRIGIIEKGSLKIEGYVEELL FT NTDEEVIEIYTREKEKTSRLLKNMNTFSKIECFEGGIRIKIKKGNFQNINKLLISNDVN FT VENLHCSETSLENYFFDVMEGDKKYV" FT misc_feature 1302360..1302896 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 179.0, E-value 8.3e-51" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1302381..1302404 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1302666..1302710 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1303183..1303923 FT /transl_table=11 FT /locus_tag="CBO1189" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I127" FT /protein_id="CAL82738.1" FT /translation="MFKVLKNEIIKMFSGKKFYVLSITLIISIVIMAVLGKSNPQDGIN FT ANNFVIKTLSGTLMKPIVPMFMVLVIAEALTEDYIHGTMKFSLMTPIKRSDFIIGKFLF FT IGLYALIFLVVGFVGSYIVGIITFGLGDKGEFLNILINNIKIYASIILPLLSFIAVMSF FT IALLVNNSGAMIGLGIGIDVIMMMIDFQVKNIMYYTFSGMYAYRIVQNLNAHNILILSF FT TACIYITVFLVLSIVVVKKKDIVL" FT sig_peptide 1303183..1303288 FT /locus_tag="CBO1189" FT /note="probabilty 0.989, with cleavage site probability FT 0.572 between residues 36 and 37" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1303219..1303287,1303330..1303398,1303492..1303560, FT 1303618..1303686,1303705..1303773,1303831..1303899) FT /note="6 probable transmembrane helices predicted for FT CBO1189 by TMHMM2.0 at aa 13-35, 50-72, 104-126, FT 146-168,175-197 and 217-239" FT /inference="protein motif:TMHMM:2.0" FT CDS 1304526..1306412 FT /transl_table=11 FT /locus_tag="CBO1190" FT /product="putative phosphodiesterase" FT /db_xref="GOA:A5I128" FT /db_xref="InterPro:IPR004129" FT /db_xref="InterPro:IPR017946" FT /db_xref="InterPro:IPR018476" FT /db_xref="UniProtKB/TrEMBL:A5I128" FT /protein_id="CAL82739.1" FT /translation="MTTRMETRHSKPISILKMIRKNFTYFKKSFFINIGFESIYKVLTS FT FIFLPFITMVLNYFMHLRGMKMMANNQILSFVGSIPGILTILILGILSFLFIFIEYAGL FT IVISQETYFDKKISAKAAFFTAMKSIRGIMKVGSIPIIIYVLFIIPFVASSMGLSSSLL FT PKIEIPTFIMDVVYKTPKWISLYAIVFFILFYFLIRWIFSLHVVVLEGKDFSSALKRSS FT QLVKGSFLKIWTTMFLWNLSIFAIVAVVVILVGIGMVLLNEVLKGNVKLFVTILSFVTT FT MGGILVMIATLFISPLTIMLITQLYYRQVKMKDGVEPIPMITTSTPSKINWQNLFNRHK FT KKLIAVSVLGIMIFTWLSYVYFITYEFDANNNLVTVTAHRGDAVNAPDNTMSSLLGAIA FT NKADYSELDVQETKDGVVVLTHDTNLKNSTGVNKNIWELVFDEVEKLDVGSHFSPKFAG FT EKIPTLGSIMKAANKKIKLNIEIKLNGHDQKLEERVVKLIEDNNFVDQCVVTSLDYNAL FT QKVKKLNPKIKVGYIVFAGMGDVTALNVDFLSVEEAVATPEFIEKVHKTNKRIHVWTIN FT DPEKMEKFIDLQVDSIITDNSKEVTRLIQEKKDKQLRNEIDYIYKIVALFND" FT misc_feature order(1304613..1304681,1304754..1304822,1304931..1304999, FT 1305069..1305137,1305237..1305305,1305363..1305431, FT 1305552..1305620) FT /note="7 probable transmembrane helices predicted for FT CBO1190 by TMHMM2.0 at aa 30-52, 77-99, 136-158, FT 182-204,238-260, 280-302 and 343-365" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1305660..1306328 FT /note="Pfam match to entry PF03009 GDPD, Glycerophosphoryl FT diester phosphodiesterase family, score 141.1, E-value FT 2.1e-39" FT /inference="protein motif:Pfam:PF03009" FT CDS 1306741..1306926 FT /transl_table=11 FT /locus_tag="CBO1191" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR024209" FT /db_xref="UniProtKB/TrEMBL:A5I129" FT /protein_id="CAL82740.1" FT /translation="MKGVIVVDKNNNKESFMAMPIEKHDTAAWANIANMKPICNVSIPS FT EVEVRNAKEWVDTNQK" FT CDS complement(1306966..1310484) FT /transl_table=11 FT /gene="nifJ1" FT /locus_tag="CBO1192" FT /product="putative pyruvate-flavodoxin oxidoreductase" FT /EC_number="1.2.7.-" FT /note="Also similar to CBO2760 (65.74 38d)" FT /db_xref="GOA:A5I130" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR002869" FT /db_xref="InterPro:IPR002880" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR011766" FT /db_xref="InterPro:IPR011895" FT /db_xref="InterPro:IPR015941" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="InterPro:IPR019456" FT /db_xref="InterPro:IPR019752" FT /db_xref="UniProtKB/TrEMBL:A5I130" FT /protein_id="CAL82741.1" FT /translation="MAKIMKTMDGNQAAAEASYAFTEVAAIYPITPSTPMAEGVDEWSA FT HGKKNIFGQSVKVVEMQSEAGASGTVHGSLAAGALTTTYTASQGLLLMIPNLYKIAGEL FT LPGVFHVSARALATHALSIFGDHQDVMATRQTGVALLAASNVQEVMDLANIAHLSAIKS FT RVPFLHFFDGFRTSHEYQKVETINYDDVAKLVDYDALKEFKSRALNPEHPTLKGTAQNP FT DIYFQGREASNKFYKEVPNIVENYMREIEKITGRSYHPFDYYGAPDAENVIVAMGSVCD FT TIEETVDYLINKGQKVGVIKIHLYRPFCPTYFMKSLPKTVKKIAVLDRTKEPGSIGEPI FT YLDVCKVFYNTKDKPIIVGGRYGLGSKDTRPSQIISVFDNLNQDNPKDGFTIGITDDVT FT NTSLPEKDIVDTTPEGTINCKFWGLGSDGTVGANKTAVKIIGDNTDLYAQAYFSYDSKK FT SGGSTISHLRFGKDKIKSPYLIYNADYIACHNKSFIYNFDVLKGLKKDGTFVLNCPWDE FT AELEEKLPASMKRYIAENNINFYIIDGISIAQNIGLGGRINMIMQSAFFKLANVIPVNE FT AVELLKNSVEKTYGKKGEKIVEMNKAAIDTGIDAVHKVNIPSSWKNAEVEPTSIKEEPD FT FIKKVQRPMSRHEGDELPVSAFNGMEDGTFPLGTTSYEKRGIAVMIPEWQIDKCIQCNQ FT CSYICPHSVIRAYLLNKDEKEKAPSTFETKKAAGKGLEELGYRIQISPLDCTGCGNCAD FT VCPAPGKALIMKNAEEQIEMQSENWEFGLNINTKENLMDPKTLKGSQFIRPLLEFHGAC FT PGCGETPYIKLLTQLFGDRMMIANATGCSSIWGGSAPSIPYTTNSQGKGPSWGNSLFED FT NAEYGYGMYLAVKQIREKLAELMQEALNMEINQDLKDAFKQWLESMDDGEGSKTATAKI FT LEIISNENYQNNPILNEIMEKKDYLIKKSHWMIGGDGWAYDIGFGGLDHVLASGDDVNI FT FVMDTEIYSNTGGQCSKSTQTGAIAKFAAAGKKIKKKDLGLMAMSYGYVYVAQIAMGAN FT MNHTIKTIAEAEAYKGPSLIIAYAPCISHGIKTGMGTSIAEEKKAVESGYWHLYRYNPM FT LKGEGKNPFILDSREPTKPFKEFIQGEVRYSSLMNVFPDIAEKMSDMAEQHARERYDNY FT RHLADK" FT misc_feature complement(1308202..1308273) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 21.5, E-value 0.0001" FT /inference="protein motif:Pfam:PF00037" FT misc_feature complement(1308217..1308252) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature complement(1308370..1308441) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 25.4, E-value 2.5e-05" FT /inference="protein motif:Pfam:PF00037" FT misc_feature complement(1308385..1308420) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT misc_feature complement(1308658..1309212) FT /note="Pfam match to entry PF01558 POR, Pyruvate FT ferredoxin/flavodoxin oxidoreductase, score 282.3, E-value FT 6.3e-82" FT /inference="protein motif:Pfam:PF01558" FT misc_feature complement(1309741..1310439) FT /note="Pfam match to entry PF01855 POR_N, Pyruvate FT flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding FT domain, score 400.4, E-value 1.9e-117" FT /inference="protein motif:Pfam:PF01855" FT CDS 1310787..1311407 FT /transl_table=11 FT /locus_tag="CBO1193" FT /product="TetR-family transcriptional regulator" FT /db_xref="GOA:A5I131" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR015893" FT /db_xref="UniProtKB/TrEMBL:A5I131" FT /protein_id="CAL82742.1" FT /translation="MKQKEKNKVSRDKILNAAIIEFGTKDYGKASLNNICNDNNISKGL FT IYHYYKNKDDLFLSCVKYCFDQFVDYIQSEEFDENDFQNIIQKHLDLRYRFFKENIYLR FT HIFFNAVLQAPMHLKQEIKDIRKNFDNVNISNYRFALSKITLREGITEEEAIEYFWIFQ FT EMFNGYFESKTYENCEFNGLIKEHEIKLGKILNIMLYGIVKED" FT misc_feature 1310826..1310966 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 43.2, E-value FT 6.3e-10" FT /inference="protein motif:Pfam:PF00440" FT CDS 1311404..1312660 FT /transl_table=11 FT /locus_tag="CBO1194" FT /product="putative Na(+)/H(+) antiporter" FT /db_xref="GOA:A5I132" FT /db_xref="InterPro:IPR006153" FT /db_xref="UniProtKB/TrEMBL:A5I132" FT /protein_id="CAL82743.1" FT /translation="MRVMVLLILGLLLAVAVALFMGKLISKVKLPAILGWLIAGMILGP FT HAVGLVNETTLNAEWYKTIVNILECAVGLLIGTELVWNKIKKSGKQLIITTLTQSLGTF FT FVVSVVFAIVFYFTGIPLYLALIFGGIALATAPAPALSVVREFKTDGPVTRTLIPMAAL FT DDMVGVVVFFSTISIISAKISEQKLPIYMILLIVLLPIIIGIGTGLLAGFLLKKENTPQ FT KTIVLLITIILISSGVGFIFDKIILPEPVLNFMLIGMAFSATFANMISKNRLEEIMSAF FT NPILDISMIVVILNLGTPLDYHLILGAGLFTAIYIISRAVGKYSGAFFGAAITRSPQVV FT KKYLGLTLLPHSGVSLVFTGIAVSVLKGPAPECAKIIQGTIAAAAVINEVIAVIVAKKA FT FEWAGEFHNKYDIELCESN" FT sig_peptide 1311404..1311479 FT /locus_tag="CBO1194" FT /note="probabilty 0.999, with cleavage site probability FT 0.444 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1311413..1311481,1311500..1311553,1311581..1311649, FT 1311686..1311754,1311767..1311835,1311872..1311940, FT 1311968..1312036,1312073..1312126,1312154..1312213, FT 1312232..1312300,1312328..1312396,1312433..1312501, FT 1312529..1312588) FT /note="13 probable transmembrane helices predicted for FT CBO1194 by TMHMM2.0 at aa 4-26, 33-50, 60-82, FT 95-117,122-144, 157-179, 189-211, 224-241, 251-270, FT 277-299,309-331, 344-366 and 376-395" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1311425..1311580 FT /note="Pfam match to entry PF00999 FT Na_H_Exchanger,Sodium/hydrogen exchanger family, score FT 20.7, E-value 1.2e-05" FT /inference="protein motif:Pfam:PF00999" FT CDS 1312961..1314436 FT /transl_table=11 FT /locus_tag="CBO1195" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003846" FT /db_xref="UniProtKB/Swiss-Prot:A5I133" FT /protein_id="CAL82744.1" FT /translation="MKERKVIIKTGLNLENSYTSLPEIFFTRQSPSRVPSPKLAVLNYS FT LITSLGLNAQVLQSADGVEILAGNKTPEEAIPISQAYAGHQFGHFTMLGDGRAILLGEH FT ITPQGERFDIQLKGSGKTPYSRGGDGKAALGPMLREYIISEAMNALGIPTTRSLAVVTT FT GESIMRETELSGAILTRVAASHIRVGTFEYVSRWGTVEELRALANYTLQRHFKKGYDKE FT NPYLFLLQEVIEKQAELIAKWQLVGFVHGVMNTDNMTISGETIDYGPCAFMDVYDPETV FT FSSIDIYGRYAYGNQPNIATWNLARFAETLLPLLHINPNEAIKIAENAVSDFTKLYKNN FT WLSGMRAKLGIFNEELEDEYLIEDLLSIMHKYGADYTNTFRALTFDNIEDTVLGGKVEF FT DKWYKLWQERLTRQEEAKLSSKQLMKSSNPSVIPRNHRVEEALEAAVKEGDYSVMEKLL FT DALSKPYDHSKEQDYYSKLPEPSTCPYQTYCGT" FT misc_feature 1312985..1314355 FT /note="Pfam match to entry PF02696 UPF0061,Uncharacterized FT ACR, YdiU/UPF0061 family, score 278.9,E-value 6.9e-81" FT /inference="protein motif:Pfam:PF02696" FT CDS 1314947..1316680 FT /transl_table=11 FT /locus_tag="CBO1197" FT /product="putative flavin containing amine oxidoreductase" FT /db_xref="GOA:A5I134" FT /db_xref="InterPro:IPR002937" FT /db_xref="UniProtKB/TrEMBL:A5I134" FT /protein_id="CAL82745.1" FT /translation="MEINEFIQPNNPTYEERDNMLKSALEEVERIEDYNNIKELLGPQE FT DITNIIPPGRGKGIKVGIIGGGVAGLSSAFELRKLGFNITIFEEQKERVGGRIYTYYFD FT KDKKMYGELGAMRIPVSHGTTWYYIDTFGLETRPFVQENENGIIYIRNKRARNDPEGRS FT VMKNIYPEFNLSTSEKNISWQEILSYALESELDKLDTSTKKELLQIKKEYSPKIKELGA FT ISTRKVMAGKGLSEGAIELLSYLAPLIGYLYYGSYIENLQDQYIVNDYYRYYIKGGLSK FT LPISFYNSLTSKNPKEYISISNSNLGKVKWMNGRTVTGIYKIDEKNKVRIKYREGKSLE FT TYCEDFDYIICAIPFSSLRSVEIYPMFTPEKMQAIKELGYEAAQKTLFLCNNSFWEEGN FT KNERIIGGNSRTDLIISSIWYPNNHLSKNIEISKNKKKHKKHKNYKSWSNPGVLLASYN FT LNLDSVRLGNIDENIGVELIKRQVEKVHGLPKGYLDSIVESYKTIEWDHEQGFYGGISH FT YREEQQNLFAYASQQPEYDERVYFAGEHISQTHAWIQGALSTGMKAANRIAEHYKYKAW FT K" FT misc_feature 1315148..1316650 FT /note="Pfam match to entry PF01593 Amino_oxidase, Flavin FT containing amine oxidoreductase, score 90.6, E-value FT 3.4e-24" FT /inference="protein motif:Pfam:PF01593" FT CDS complement(1316725..1317615) FT /transl_table=11 FT /locus_tag="CBO1198" FT /product="AraC-family transcriptional regulator" FT /db_xref="GOA:A5I135" FT /db_xref="InterPro:IPR003313" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:A5I135" FT /protein_id="CAL82746.1" FT /translation="MNKNWLDEVKKLPSVDSNIRFFGGHKHSVEKGWSVSEEYHYAFEI FT LIVLAGKQLTKANQHEYTINKNEIILIPPGYRHTNTCISKEGMTYFCAHFDIDEPQIHH FT DLICYCNFIFTEENEIHPHLKNILIKWINLLNADTSSILTKLQTEIILIELITELLKYC FT ETKKVLDVESNDNRLYYARCISEKIRQNFREFSLNPSEDKLETLTIKYIANQLNISTGY FT LLVNFKSVYNISPKSYLNQLKFNEAKIFLGQPNISLSEISERIGYRNVSHFSRQFKLWS FT GISPYEFRNILQIKK" FT misc_feature complement(1316746..1316880) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 36.2, E-value 7.9e-08" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(1316896..1317009) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 21.3, E-value 0.0025" FT /inference="protein motif:Pfam:PF00165" FT misc_feature complement(1316932..1316997) FT /note="Predicted helix-turn-helix motif with score FT 1248.000, SD 3.44 at aa 207-228, sequence FT LTIKYIANQLNISTGYLLVNFK" FT misc_feature complement(1317130..1317576) FT /note="Pfam match to entry PF02311 AraC_binding, AraC-like FT ligand binding domain, score 15.3, E-value 0.0025" FT /inference="protein motif:Pfam:PF02311" FT CDS 1317815..1318540 FT /transl_table=11 FT /locus_tag="CBO1199" FT /product="putative membrane protein" FT /note="Similar to the C-terminal region of several FT transporters." FT /db_xref="GOA:A5I136" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:A5I136" FT /protein_id="CAL82747.1" FT /translation="MNIANYKVNNNPNKEIINFSEKLGYGLGDFACNLVWNSLSMFILY FT FYTDVMGMKAAIISTLMLVVRIIAGFMDIASGIVVDKTKTKYGKRNTAILGSIIFILGS FT LFALIDLTSVKLIYISIIVKGTGNALISATVFALLADTIEYGEWKTNVRTEGLVYSAGN FT FGLKIGIGLGTAIVGWLLAFSNYNGSSKIQTNTAINAINILFIWLPMILSGVQIILLKF FT YKLDKIYPNIISDLENRKI" FT misc_feature order(1317887..1317955,1317983..1318051,1318088..1318156, FT 1318166..1318234,1318295..1318363,1318406..1318474) FT /note="6 probable transmembrane helices predicted for FT CBO1199 by TMHMM2.0 at aa 25-47, 57-79, 92-114, FT 118-140,161-183 and 198-220" FT /inference="protein motif:TMHMM:2.0" FT CDS 1318554..1319882 FT /transl_table=11 FT /locus_tag="CBO1200" FT /product="putative glucosylceramidase/O-glycosyl hydrolase" FT /db_xref="GOA:A5I137" FT /db_xref="InterPro:IPR001139" FT /db_xref="InterPro:IPR013780" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:A5I137" FT /protein_id="CAL82748.1" FT /translation="MKFIQYKTTKKDKFLKNEINNTTDERPTLHVSQIENRIIEGFGSC FT FNELGMKALNHLDKDERNKVLDQLFSTKGDCRFNLCRMPIGASDYATEWYSYNENENDF FT DMEKFSIQKDKRLLIPYIKEALKRNPNIILTASPWSPPTWMKTQKAYNFGTLRFEEKVL FT KAYALYFVKFVQAYEEEGITIHQVHVQNEVVADQKFPSCRWTGDQLTDFIKNYLGPAFE FT KHNISSEIWLGTINAPEPYVEWLEDYTQDFDVYAGLVLRDTKAYKYVKGVGYQWAGKNA FT IQRSVEAFAEKRFIQTENECGNGKNTWIYAEYVFNLFRHYIVNGVNGYMYWNAVLEPKG FT MSTWGWEQNSMITVNPETKEVMYNPEFYVMKHFSHFVQKGAKRLTTSGVDSVDTVAFRN FT PDESIIIVISNKNDDSRIANIEFTGEIFEVELEGHSFNTIVLE" FT misc_feature 1318557..1319879 FT /note="Pfam match to entry PF02055 FT Glyco_hydro_30,O-Glycosyl hydrolase family 30, score 57.8, FT E-value 2.5e-14" FT /inference="protein motif:Pfam:PF02055" FT CDS 1319946..1320887 FT /transl_table=11 FT /locus_tag="CBO1201" FT /product="putative sugar kinase" FT /db_xref="GOA:A5I138" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:A5I138" FT /protein_id="CAL82749.1" FT /translation="MDNKNYLSIDIGGTFIKYGVLDHSGNIISKNKKRTSRNIDDLLFD FT LSEIVEKQSEHISGIGISAPGKVDTREGVIYGGGNLTFLDNWPIVSILQDKYKIPVAVE FT NDGKSAALAEMWLGNLQDVDDGAAIILGTGIGGGIVINKKLRKGKHYSAGEISFMINKS FT EEKSYLKFHGFNASAVRMVKTIGEYLGLSDPLDGEAAFKSIISGNDFANQVFINYCDSI FT AELINNIQCTLELEKYVIGGGISTNKILIKGIQNSFNRLRMREPLLEKSIHRPIIQATK FT FNNDANLYGALYNLLLDEETIDIIKNNENMGD" FT misc_feature 1319967..1320467 FT /note="Pfam match to entry PF00480 ROK, ROK family, score FT 96.0, E-value 7.6e-26" FT /inference="protein motif:Pfam:PF00480" FT misc_feature 1320249..1320272 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1320890..1322335 FT /transl_table=11 FT /locus_tag="CBO1202" FT /product="6-phospho-beta-glucosidase" FT /db_xref="GOA:A5I139" FT /db_xref="InterPro:IPR001360" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018120" FT /db_xref="UniProtKB/TrEMBL:A5I139" FT /protein_id="CAL82750.1" FT /translation="MKTNFPENFLWGGAVAANQCEGAYNIDGKGLSVQDVAPKGIKAGP FT TLEPTQDNMKLIGIDFYHRYKEDIKLFAEMGFKVFRLSIAWSRIFPMGNEKEANEKGLQ FT FYDDVFDECLKYGIQPIVTLSHYETPLHLSKAYDGWKCREMIGFFNKYVCTVFNRYKDK FT VKYWLTFNEINSITHAPFLSGGIYTPIEKLSKQEIYQAIHHELVASAMAVKACHEIIPD FT AKIGCMILGMPVYPLKPSPEDMWETLNKERENFFFSDIQVRGYYPSYSKRFFKENNIKL FT DITNKDIEILKNTVDFISFSYYMSICESSDKSIRAGEGNIIGGIPNPYLKASEWGWQID FT PKGLRYYLNILYDRYQKPLFIVENGLGAVDELVELGDGTKTVLDDYRISYLRDHLIQVS FT EAIEDGVDLMGYTSWGCIDLVSFTTSELKKRYGFIYVDRNDDGTGTLERYKKKSFYWYK FT EVISSNGDIEALCSNISIEKDKI" FT misc_feature 1320893..1322299 FT /note="Pfam match to entry PF00232 Glyco_hydro_1, Glycosyl FT hydrolase family 1, score 536.9, E-value 1.5e-158" FT /inference="protein motif:Pfam:PF00232" FT misc_feature 1320914..1320958 FT /note="PS00653 Glycosyl hydrolases family 1 N-terminal FT signature." FT /inference="protein motif:ProSite:PS00653" FT misc_feature 1321964..1321990 FT /note="PS00572 Glycosyl hydrolases family 1 active site." FT /inference="protein motif:ProSite:PS00572" FT CDS 1323006..1324634 FT /transl_table=11 FT /locus_tag="CBO1203" FT /product="beta-amylase precursor" FT /EC_number="3.2.1.2" FT /db_xref="GOA:A5I140" FT /db_xref="InterPro:IPR000125" FT /db_xref="InterPro:IPR001554" FT /db_xref="InterPro:IPR002044" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:A5I140" FT /protein_id="CAL82751.1" FT /translation="MYYGNKILKKYGNFILSLVLAFALSLCFTFKAFAANMSPDYKCCV FT MGPLEKVDNWSDFKKQLITLKNNGVYAITTDVWWGYVESEGDNKFDWSYYKTYGDTVRA FT AGLKWIPIISTHECGSNVGDSVNIPLPSWLWEKDTVDNMKFKDENGVYNKETLSPWWSD FT TIKQYDELYESFASNFSSYKDIIAKIYLSSGPAGELRFPSYNPSTGWSRGFLQCYTKAA FT KLDFQNAMKNKYDTISRLNSEWGTSLKSFEQVSPPTDGDNFFVNGYKTTYGNDFLTWYQ FT GVLIKHLSNIAIKAHNRFDPVFGVTIGAKVSGVHWLMNSPNMPHAAEYCTGYYNYSTLL FT DQFKKSNLDLTFTCLEKEDSNPYNYPYSAPKSLVINIANLAREKGIKYFGENASDIYNN FT KKAYENCAEMLFNYDFSGFTLLRLKNIVNYDGTPNAEMDHFADILPIKPVPVTFTVNNV FT NLESDENLYLTGSRWEMANWSTEFYPLQFKNNNGSYTITTHLAEGHNYEFKAIKKNNNG FT NVIWQGGYNKFYNVPKGGDSYTWSW" FT sig_peptide 1323006..1323105 FT /locus_tag="CBO1203" FT /note="probabilty 1.000, with cleavage site probability FT 0.946 between residues 34 and 35" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1323135..1324325 FT /note="Pfam match to entry PF01373 Glyco_hydro_14,Glycosyl FT hydrolase family 14, score 873.2, E-value 8.7e-260" FT /inference="protein motif:Pfam:PF01373" FT misc_feature 1324347..1324628 FT /note="Pfam match to entry PF00686 CBM_20, Starch binding FT domain, score 47.2, E-value 3.8e-11" FT /inference="protein motif:Pfam:PF00686" FT misc_binding 1324777..1325063 FT /gene="tyrZ" FT /gene_synonym="tyrR" FT /gene_synonym="tyrS1" FT /gene_synonym="tyrT" FT /locus_tag="CBO1204" FT /bound_moiety="tRNA" FT /note="T-box leader" FT repeat_region complement(1325135..1325270) FT /note="intergenic repeat 1" FT CDS 1325403..1326605 FT /transl_table=11 FT /gene="tyrZ" FT /gene_synonym="tyrR" FT /gene_synonym="tyrS1" FT /gene_synonym="tyrT" FT /locus_tag="CBO1204" FT /product="tyrosyl-tRNA synthetase" FT /EC_number="6.1.1.1" FT /note="Also similar to CBO3323, tyrS, (32.5 38d)." FT /db_xref="GOA:A5I141" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002305" FT /db_xref="InterPro:IPR002307" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR024088" FT /db_xref="InterPro:IPR024108" FT /db_xref="UniProtKB/TrEMBL:A5I141" FT /protein_id="CAL82752.1" FT /translation="MKSIEEQIKIISKGVDEIINVEDLKSKLEKSQKTGKPMTVKLGLD FT PTAPDIHIGHSVVLRKIRQLQDLGHRAVIIIGDFTGRIGDPTGKSKTRKPLTQDEVMFN FT AKTYEEQIFKIIDKDKTDLKFNSEWLGKLSLRDTIELTSKYTVARMLEREDFKKRFESH FT SSIGIHEFFYPLLQAFDSVSLKADIELGGTDQRFNLLMGRTIQKDFDQESQVAILMPLL FT EGTDGKDKMSKSLGNYIGINEDANDIYGKVMSIPDGMIVKYYELATDIHPDEVAKIKAR FT LGEEKVNPRDIKMELAKEIVRLYHGEEASVKAEVNFKNIFQQGNIPEDIDIIKVNLTET FT NIVDLIVKAKFAPSKNEARRLVKQGAVKINGEKVDEECKVKNEDILQVGKKKFIKILSQ FT N" FT misc_feature 1325499..1326368 FT /note="Pfam match to entry PF00579 tRNA-synt_1b, tRNA FT synthetases class I (W and Y), score 346.5, E-value FT 3.1e-101" FT /inference="protein motif:Pfam:PF00579" FT misc_feature 1325538..1325570 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature 1326420..1326560 FT /note="Pfam match to entry PF01479 S4, S4 domain, score FT 47.6, E-value 2.9e-11" FT /inference="protein motif:Pfam:PF01479" FT CDS 1326892..1327263 FT /transl_table=11 FT /locus_tag="CBO1205" FT /product="GntR-family transcriptional regulator" FT /db_xref="GOA:A5I142" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I142" FT /protein_id="CAL82753.1" FT /translation="MDFNFNEDIPIYQQIANAIEDGILKGIYEEETQIPSTTEISVNYK FT INPATVGKGFNLLVSEEIIYKKRGVGMFVCSGAKEKLKEKRKNKFFDSYILSLVDEAKR FT LGITIDEIMDMIKGGYGNE" FT misc_feature 1326922..1327113 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 32.0, E-value FT 1.5e-06" FT /inference="protein motif:Pfam:PF00392" FT CDS 1327256..1328128 FT /transl_table=11 FT /locus_tag="CBO1206" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I143" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5I143" FT /protein_id="CAL82754.1" FT /translation="MSNIVIKNVTKSYQRKEALSNISINIEEGKIYGLLGRNGAGKTTL FT LHLITNRAILDSGEILIDGENVYENNKALSKVYFMEEKNLFPESMKIVDVFEWTKEFYE FT DFDMEYAIKLSELFKLNIKKKVKSLSTGYKSISKIIATLASGAEILIFDEPILGLDANH FT RELFYKELLKIYGEGKKTIVISTHIIEEISHLLEKVVILKEGKIIESDSVENMLNLAYA FT VSGSSDDVDKYITAKNIINIETLGSYKKATILQERTKEDLDNIKKLELEISTVELQKLF FT IYLTNMEEK" FT misc_feature 1327340..1327870 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 103.0, E-value 6.3e-28" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1327361..1327384 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1328129..1328875 FT /transl_table=11 FT /locus_tag="CBO1207" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I144" FT /protein_id="CAL82755.1" FT /translation="MEKSNKICKYQLKTSIKPILIYYSILIGFLLLILIEKFTSQNSNV FT QLSGIEMSTAIFIFVMALNSFKSSFYFSQGNNISRNSFIIGTIKAGIIMAAALSLIDVI FT INRIYNIFIICPTNFDMIYTKAIYGIDAGWEPILTHSIFNSFGTYIWTFAVYVFLFMLG FT LLITIIYFRLNKLGQIVLSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAI FT LTFIILSILAIAGQYLLIKKAVTDKN" FT misc_feature order(1328186..1328245,1328273..1328341,1328375..1328443, FT 1328573..1328641,1328654..1328722,1328780..1328848) FT /note="6 probable transmembrane helices predicted for FT CBO1207 by TMHMM2.0 at aa 20-39, 49-71, 83-105, FT 149-171,176-198 and 218-240" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1329009..1329377) FT /transl_table=11 FT /locus_tag="CBO1208" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I145" FT /protein_id="CAL82756.1" FT /translation="MYPYFYYFYYDDYIRGAAPPPMPPFMTPQGGFSPVGAPPTTPPPS FT VPPTKPIKSGSDVKAIDPGSIGLCRYRFTYIWPSRGNPFWMWIVYIGRRSISGWRWTGR FT NWAYAGIDLNRIDSFKCY" FT CDS 1329727..1330641 FT /transl_table=11 FT /locus_tag="CBO1210" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I146" FT /protein_id="CAL82757.1" FT /translation="MSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSH FT NECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVRRPVVAKIPVVLAEKEIQIDVESKTR FT LKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKD FT DVVSGEIKHTTEKIPFTCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKL FT GRLTCQEFLEDSITLVEKPFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRV FT KVLQLQQVTVGDPNNGSEDGCRK" FT CDS 1330830..1333541 FT /transl_table=11 FT /locus_tag="CBO1211" FT /product="putative exported protein" FT /note="No significant database matches. CDS contains FT imperfect repeat regions rich in lysine, glutamic acid and FT asparagine." FT /db_xref="UniProtKB/TrEMBL:A5I147" FT /protein_id="CAL82758.1" FT /translation="MKNNNLKSFIIFIIIFQLLQEEERENNIYNLINLSNLNKRERLIK FT EEKENQVSKEHNQLKNEKSKRLPIVNVELRNEKSKQIYKEHNELKEEKNKEVSNESIQL FT KNEKSKQLPKINVELKEEKSKQIIKEHNESENKKNKQIPKVNIELRNEKSKHIIKEHNE FT LKKEKDKYVSNESIELKNEKSKQLPKINVELKEEKSKQIIKEHNELKNEKSKSIPKESI FT KLKEEKDKQVFKEHNESENEENKQISKVNVELKNERSKQLPKINVELKEEKNKQSIKEH FT NELREETKKKLPKVNIELKEETKKQVPNKSLELDEEKDKQVFKEHNELRNEKSKQIIEE FT HNESKDEKSKQVSKGNIELKKEKSKQIIKEHNESKNEKNKQIPKVNVELRNEKSKQIFS FT EHNELNKEKDKYVSNESIESKDGKSKQISNRNTQLKNEKNKQTSKVNIELRNEKSKQII FT KEHNELKEEKKKQPPKVNIELNKEKVKQVFNESIKSKNEKSKQVLNRNTQLKNEKSKQL FT PKINVELKEEKNKQIIKEHNELEKGKGKQPDKVNIELNKEKVKQVFNESIESKNEKSKQ FT VVNRNTQLKNEKSKQLPKINVELKEEKSKQISKEHNELRKEKRKKIPKANVELKEEKSK FT QIIKEHNELKNEKSKQTPKVNVELNKEKAKHVFNESIKSKNEKSKQISKENTNIELNEE FT KKKQVIKEDIQLKNKIIKKSHTKKEHKKIRKNIISKVPIVIASFETEITDSVFTKIEST FT FVDIKEVKNNIFIEEANLIKLNSNKAKLFINGYIRSYIGYITLDKINKSSIETKNQGII FT SHKDFSKAINIDLLFFDNMKEGEAFFVDFNNDIKDKKALLGKIERLDIKSSNIYKDVQD FT VHLGREKSYLMLQQNLFIRAKIDVLQKNIISL" FT repeat_region 1331167..1333030 FT repeat_region 1331316..1331333 FT repeat_region 1331361..1331378 FT repeat_region 1331406..1331423 FT repeat_region 1331451..1331468 FT repeat_region 1331496..1331513 FT repeat_region 1331541..1331558 FT repeat_region 1331586..1331603 FT repeat_region 1331631..1331648 FT repeat_region 1331676..1331693 FT repeat_region 1331721..1331738 FT repeat_region 1331766..1331783 FT repeat_region 1331811..1331828 FT CDS 1333619..1335133 FT /transl_table=11 FT /locus_tag="CBO1212" FT /product="putative chitinase/spore peptidoglycan hydrolase" FT /db_xref="GOA:A5I148" FT /db_xref="InterPro:IPR001223" FT /db_xref="InterPro:IPR001579" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR003646" FT /db_xref="InterPro:IPR011583" FT /db_xref="InterPro:IPR013247" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:A5I148" FT /protein_id="CAL82759.1" FT /translation="MWRQPNISYIVKPGDSLFTIARSYGITVEQLKEYNGLVSNDLYVG FT QQIFIPISIYKVQRGDSLYYIAKKFDTTVESLMVLNNLDSINLNIGQILYIPLYTEAIM FT KVEDGNIRSQPSINSKILYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVSKAIVDFKTY FT GNMKPVVAVDGFYTLEEGETLPSSYESFVTNINLISEICLFMFRIDPSDATAIEKFGDF FT TDEYVKELVNIAHRNNVRALAVVHNLLYRPGGTTKAKDLVKSLVSTRENRQIFINNLIS FT LIEKYNFDGVNIDIEDVYIEDKDNLSSLYLEMGREFRRKGYFLSASIPSRVSDEPFNPF FT SDPFDYRIIGSAVDEFIVMLYNEHGWPGSGPGPVVSIGWMNRVLNYTITRVPRNKVVAA FT VSVFGFDFNLTTGRNTYVTYAGAIEIAKRYGKDIIFDEETKTPMFSYVDENGNNHEVWF FT ENAESIYAKAELAFNKGIKGIALWRLGMEDNKIWDSMKKDIVVKMA" FT misc_feature 1333643..1333771 FT /note="Pfam match to entry PF01476 LysM, LysM domain,score FT 78.1, E-value 2e-20" FT /inference="protein motif:Pfam:PF01476" FT misc_feature 1333781..1333909 FT /note="Pfam match to entry PF01476 LysM, LysM domain,score FT 68.0, E-value 2.1e-17" FT /inference="protein motif:Pfam:PF01476" FT misc_feature 1333808..1335079 FT /note="Pfam match to entry PF00704 Glyco_hydro_18,Glycosyl FT hydrolases family 18, score 58.3, E-value 1.7e-14" FT /inference="protein motif:Pfam:PF00704" FT misc_feature 1334480..1334506 FT /note="PS01095 Chitinases family 18 active site." FT /inference="protein motif:ProSite:PS01095" FT CDS 1335307..1336566 FT /transl_table=11 FT /locus_tag="CBO1213" FT /product="putative signaling protein" FT /db_xref="GOA:A5I149" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/TrEMBL:A5I149" FT /protein_id="CAL82760.1" FT /translation="MKEKNLIKQMELSVIEKMGIAYCCCKISLNSYGQLEDFIFMESND FT YFKDLTGFTKEYIKNKKAKDIIAFGSHRINIMKALEKILLYKEEKIEFEDYFDITKKWV FT KVLLYTQKKQVFYITFYDITKYKVKEIELKNTIKKYKYLIELSADAIIIRNLNGDIIYC FT NKSALNLFGYSLEEMKNLNMIDLVPRSVMKDIGFNMSIGDKPVERVHKRKDGTHFYGEE FT TTKLINIEGELGIATYIRDITERKIYNDKTKQMAYFDSLTELPNRNSFLKQLEHEIKLS FT KKKQSLLAIMFLDLDKFKEVNDNFGHCTGDKLLWQVAKRVKNTISSKDLIARFGGDEFT FT ILIRNIAHEKQVEDLARDIIEVFKEPICIEGIYVNIKTSIGISFFPKDGHTSQELIKKA FT DKAMYDAKKIGSNKFQIYKD" FT misc_feature 1335718..1335909 FT /note="Pfam match to entry PF00989 PAS, PAS domain, score FT 34.8, E-value 2.1e-07" FT /inference="protein motif:Pfam:PF00989" FT misc_feature 1336060..1336545 FT /note="Pfam match to entry PF00990 GGDEF, GGDEF FT domain,score 215.8, E-value 6.8e-62" FT /inference="protein motif:Pfam:PF00990" FT CDS 1336966..1337640 FT /transl_table=11 FT /gene="sdhB" FT /locus_tag="CBO1214" FT /product="putative L-serine dehydratase, beta chain" FT /EC_number="4.3.1.17" FT /db_xref="GOA:A5I150" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR004643" FT /db_xref="InterPro:IPR005131" FT /db_xref="UniProtKB/TrEMBL:A5I150" FT /protein_id="CAL82761.1" FT /translation="MKDYSVFDVIGPIMIGPSSSHTAGAARLAKVACSIAGDNNIEEVK FT FYLHGSFAKTYKGHGTDKALIAGMLNMDPWDENLRKSFEIAQRNGLKYEFIETDLGDAH FT PNTVKFVIKKTDGAVSEIIGSSIGGGNIVITSIDGQSMEFTGSNPTIVTHHKDVPGIIS FT QISTMMYSEGINIGAMKVFREGKGTTATMTFETDGEIPKKIIDEIKAIKDIENVKIINP FT IK" FT misc_feature 1336978..1337406 FT /note="Pfam match to entry PF03315 SDH_beta, Serine FT dehydratase beta chain, score 207.0, E-value 3e-59" FT /inference="protein motif:Pfam:PF03315" FT misc_feature 1337410..1337634 FT /note="Pfam match to entry PF01842 ACT, ACT domain, score FT 41.0, E-value 2.7e-09" FT /inference="protein motif:Pfam:PF01842" FT CDS 1337653..1338543 FT /transl_table=11 FT /gene="sdhA" FT /locus_tag="CBO1215" FT /product="putative L-serine dehydratase, alpha chain" FT /EC_number="4.3.1.17" FT /db_xref="GOA:A5I151" FT /db_xref="InterPro:IPR004642" FT /db_xref="InterPro:IPR005130" FT /db_xref="UniProtKB/TrEMBL:A5I151" FT /protein_id="CAL82762.1" FT /translation="MFVNTGKELIRVCDEKKLKIWEYTLKIEAESKNVSEKEVFETMRK FT ALKVMQHSAEIGREKEVKSVSGLIGGDALKLEKYSKGENTLTGNFMVRAMAMAISTSEV FT NAAMGRIVASPTAGSAGILPAVVIAAGEKLNKSEDDLVKALFTASGLGILISKNATTAG FT AEGGCQAECGSAAAMASAAVVEMMGGSVEQALDAGAIVIKNILGLVCDPVAGLVEIPCA FT KRNIAGTVSALTTADMVMAGVTSHIPFDDSVEAMYRVGKQLPSCLRETALGGVAVTEAG FT LKLKEKVFGCTGCKK" FT misc_feature 1337659..1338486 FT /note="Pfam match to entry PF03313 SDH_alpha, Serine FT dehydratase alpha chain, score 342.5, E-value 4.8e-100" FT /inference="protein motif:Pfam:PF03313" FT CDS complement(1338677..1338850) FT /pseudo FT /transl_table=11 FT /locus_tag="CBO1215A" FT /product="putative methyl-accepting chemotaxis protein FT (partial)" FT /note="Partial CDS. Similar to an internal part of FT methyl-accepting chemotaxis proteins." FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82763.1" FT CDS 1338967..1339176 FT /transl_table=11 FT /locus_tag="CBO1216" FT /product="hypothetical protein" FT /note="No database matches." FT /db_xref="UniProtKB/TrEMBL:A5I153" FT /protein_id="CAL82764.1" FT /translation="MSRYEFDINDIKNIQVDDLPSAKLGIIDSLSGKDNHKNTIEQGKM FT SSYIAGHELGTEIENLLKGDQQDY" FT CDS complement(1339335..1339478) FT /transl_table=11 FT /locus_tag="CBO1217" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I154" FT /protein_id="CAL82765.1" FT /translation="MKRDEKSEEINNKTDNDRMYEKKPDWDLDKNYEKRQQMILDSVRA FT VK" FT CDS 1339562..1339681 FT /transl_table=11 FT /locus_tag="CBO1218" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I155" FT /protein_id="CAL82766.1" FT /translation="MYTVSFLLEYNKMYLVNIFVINLNLIYFLNFYVNIKVGD" FT misc_feature 1339598..1339666 FT /note="1 probable transmembrane helix predicted for CBO1218 FT by TMHMM2.0 at aa 13-35" FT /inference="protein motif:TMHMM:2.0" FT CDS 1339750..1340334 FT /transl_table=11 FT /locus_tag="CBO1219" FT /product="putative hydrolase" FT /db_xref="GOA:A5I156" FT /db_xref="InterPro:IPR009206" FT /db_xref="InterPro:IPR010708" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:A5I156" FT /protein_id="CAL82767.1" FT /translation="MDNLNICIDIDGTITEPYYWLEISNKYFKKNIKPEDITVYNIEDV FT LGITEEEYMKFYEKYKVRIHTEEKLRQGAKKVLNELNKYHNIYFVTAREKSLEVLTKSY FT LINHSIKFRDLYVLGSHYKVDKAKELNCDIFIEDNPNNAVELSEAGFKVILLDTNYNKH FT IKENENIIRIRHWDEVYNIVKEISSTEEKAI" FT misc_feature 1339756..1340226 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 5.4, E-value 0.01" FT /inference="protein motif:Pfam:PF00702" FT CDS complement(1340356..1341324) FT /transl_table=11 FT /locus_tag="CBO1220" FT /product="putative dipeptidase" FT /db_xref="GOA:A5I157" FT /db_xref="InterPro:IPR008257" FT /db_xref="UniProtKB/TrEMBL:A5I157" FT /protein_id="CAL82768.1" FT /translation="MNFIDMHCDTIYALINKKPCSNKNIAISENETLYKNSLSVDIEKL FT EASNSLAQFFALFIDINETNSPLKTTLNMLDFFHNELAKHSKYIALAKNYEDINKNLSN FT NKISAFLTIEEGAALEGTLYNLRNFYRLGVRLITLTWNFPNEIGFPNCKKEFMNKGLTP FT FGLEVVEEMNKLKMIIDVSHLSDGGFYDVVRYSKSPFVASHSNARTITNHPRNLTDDMI FT KILSNKGGVMGINFEKTFLGQSEEGKIPEMIDHIKHIKNVGGIDVMCIGSDFDGIETPS FT EIKSSDEIEKLINALKKESFHESEIEKILYENALRVIKEIL" FT misc_feature complement(1340359..1341324) FT /note="Pfam match to entry PF01244 Renal_dipeptase, Renal FT dipeptidase, score -4.0, E-value 1.9e-08" FT /inference="protein motif:Pfam:PF01244" FT CDS complement(1341704..1342126) FT /transl_table=11 FT /locus_tag="CBO1221" FT /product="putative membrane protein" FT /db_xref="GOA:A5I158" FT /db_xref="InterPro:IPR006977" FT /db_xref="UniProtKB/TrEMBL:A5I158" FT /protein_id="CAL82769.1" FT /translation="MNNPALKIGSALIGVLIAVFGVALLIFIIFKISKVALSYQQTVTL FT YLVAGLSTCIGSMFKAIYMLISKKAVGTNAILNPSVKNTLIANIDIFNIWYYVLLGIGI FT YAMGKTSKKKATILTIILAILSIGAAVLPFLVGIKK" FT misc_feature complement(order(1341713..1341781,1341809..1341877, FT 1341935..1342003,1342031..1342099)) FT /note="4 probable transmembrane helices predicted for FT CBO1221 by TMHMM2.0 at aa 13-35, 45-67, 87-109 and 119-141" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1341797..1341820) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT sig_peptide complement(1342030..1342126) FT /locus_tag="CBO1221" FT /note="probabilty 0.609, with cleavage site probability FT 0.192 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1342119..1342397) FT /transl_table=11 FT /locus_tag="CBO1221A" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I159" FT /protein_id="CAL82770.1" FT /translation="MEQQENVNTNLNLTLKEKFKFFFTSPSKLFEYYRENPKFGILFLI FT TTICAIIYQIIHSNLTKEIVKKQMEKQFEGLDPQALEMTKKNYGYYE" FT CDS complement(1342504..1343715) FT /transl_table=11 FT /locus_tag="CBO1222" FT /product="putative ABC transporter, permease protein" FT /db_xref="GOA:A5I160" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5I160" FT /protein_id="CAL82771.1" FT /translation="MLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNIINIFPYSD FT STTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKSSNLTGM FT SFKNYSKDHELLFGKYPNDSKNEVVIGYRLAAYLINKKDVDNVKEEEIKKILRKKLKVK FT VSRPNEKSEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENFLKNKGY FT ESIDLVLKSQEKSSQAEKYLKDNGYLYQSLKEMQNSIGKTLSGIKLILSAIGGISLLVA FT AFGIANTMNMSILERKKEIGVMKVVGASVGDIKKIFIGEATAIGFSGGVVGLLIGSFIS FT FVINTMLKSKLSTSSSGDVKIAVSSIGLVTFVLFFSSCVGFLSGLYPASKAAKLDVISS FT IKDE" FT misc_feature complement(1342528..1342929) FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 135.9, E-value 7.6e-38" FT /inference="protein motif:Pfam:PF02687" FT misc_feature complement(order(1342561..1342629,1342687..1342755, FT 1342861..1342929,1343653..1343706)) FT /note="4 probable transmembrane helices predicted for FT CBO1222 by TMHMM2.0 at aa 4-21, 263-285, 321-343 and FT 363-385" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1343789..1344604) FT /transl_table=11 FT /locus_tag="CBO1223" FT /product="putative ABC transporter, exported protein" FT /db_xref="UniProtKB/TrEMBL:A5I161" FT /protein_id="CAL82772.1" FT /translation="MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGS FT KFKINFSITNNKETNLKDVVITLVGSEDKKVLTDFSPVGSTNEIYVGHIDGETSKDATI FT EMACDPNLKAGNYNILVKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDGEGK FT KLSLNFVNSGKSTLKDVMVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEI FT SFKDELNKPSKVSQEFSIKGKIDDTNTVKKEKKSSGILGFFKGLLGIGD" FT sig_peptide complement(1344529..1344604) FT /locus_tag="CBO1223" FT /note="probabilty 1.000, with cleavage site probability FT 0.985 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1344641..1345315) FT /transl_table=11 FT /locus_tag="CBO1224" FT /product="transporter, ATP-binding protein" FT /db_xref="GOA:A5I162" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I162" FT /protein_id="CAL82773.1" FT /translation="MSIIKATDVKKTFTIGKMKVDILKGVSVKIEKGEFVAIIGESGSG FT KSTFLNILGGLMPPSSGDIFIENEKINGLSENNLALFRRHNIGFVFQSYNLIPQLTALE FT NVEMPLIFSGISKKERKNRAFEMLKKVGLEERAHHKPSELSGGQQQRVSIARALVNYPK FT IVLADEPTGNLDSKNGTEILNILKELNETTGQTFVIVTHSSQVCDYANKIIKVVDGKVF FT NN" FT misc_feature complement(1344659..1345219) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 217.6, E-value 1.9e-62" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(1344842..1344886) FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1345175..1345198) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1345488..1346345) FT /transl_table=11 FT /gene="appC" FT /locus_tag="CBO1225" FT /product="putative oligopeptide ABC transporter, permease FT protein" FT /db_xref="GOA:A5I163" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I163" FT /protein_id="CAL82774.1" FT /translation="MINLFLNERLKLNLKIQFKENKLGYISLSIILILVLFSTFSFLSP FT YDPNKIDLSNKLANPSLKHLFGTDEMGRDYFTRSLYGGRASLMVGFISMIISTTLGTIV FT GTFSGYIGGKIDNIIMRTIDILMCIPTFFLILIINAYLKPGIENIIIIIGLFGWMDIAR FT IVRAQTLSLKEREYVLCSKALGAPNNRIIFKHIIPNVIPSVMVASTINIASAILTESSL FT SFLGLGVRAPNSSWGSMLQNAQGFISSSPYLAIFPGLFILFTVLNFNILGDIFATAFDS FT KANK" FT misc_feature complement(1345491..1346099) FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 162.0, E-value 1.1e-45" FT /inference="protein motif:Pfam:PF00528" FT misc_feature complement(order(1345521..1345589,1345692..1345760, FT 1345845..1345913,1345926..1345994,1346013..1346081, FT 1346217..1346285)) FT /note="6 probable transmembrane helices predicted for FT CBO1225 by TMHMM2.0 at aa 21-43, 89-111, 118-140, FT 145-167,196-218 and 253-275" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(1346213..1346345) FT /gene="appC" FT /locus_tag="CBO1225" FT /note="probabilty 0.894, with cleavage site probability FT 0.666 between residues 43 and 44" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1346342..1347295) FT /transl_table=11 FT /gene="appB" FT /locus_tag="CBO1226" FT /product="putative oligopeptide ABC transporter, permease FT protein" FT /db_xref="GOA:A5I164" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I164" FT /protein_id="CAL82775.1" FT /translation="MSKYIRKRIIEAIPILIFISIISFLLIKLAPGDPIRAFINPKMKP FT SDIARIRHNLGLDKPIYIQYILWLKNVLKGDLGYSLINSRPISTQIIERLPATLLLMGS FT SLLISLVLGIIFGVISAVNKNKLIDNIISVISYIGISIPSFWFAMILIYIFSVNLKLLP FT SVGMHTIGVDSRLDVLKHLILPCTVLSFGNISVITRYIRSNVISELSEDYVMIAYAKGL FT SKKRILYKHVLKNALLPIITILGMSLPNLVAGAFITETIFGWPGMGRLGIKAIFGFDYP FT LIMAITMLTSVLLIIGNLLADICYSLIDPRIKELGR" FT misc_feature complement(1346354..1347013) FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 196.0, E-value 6.1e-56" FT /inference="protein motif:Pfam:PF00528" FT misc_feature complement(order(1346396..1346464,1346522..1346590, FT 1346705..1346773,1346831..1346899,1346936..1347004, FT 1347191..1347259)) FT /note="6 probable transmembrane helices predicted for FT CBO1226 by TMHMM2.0 at aa 13-35, 98-120, 133-155, FT 175-197,236-258 and 278-300" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(1347181..1347295) FT /gene="appB" FT /locus_tag="CBO1226" FT /note="probabilty 0.973, with cleavage site probability FT 0.473 between residues 37 and 38" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1347494..1349092) FT /transl_table=11 FT /gene="appA" FT /locus_tag="CBO1227" FT /product="putative oligopeptide ABC FT transporter,substrate-binding protein" FT /db_xref="GOA:A5I165" FT /db_xref="InterPro:IPR000914" FT /db_xref="InterPro:IPR023765" FT /db_xref="UniProtKB/TrEMBL:A5I165" FT /protein_id="CAL82776.1" FT /translation="MKVKKLLAMILVASTTLVATACGNSNSSSGSTAKETSAKENIKDG FT GNLVFSIRGEPEILNPIYAYDRDTMTMDNALFAPLFYINGDKIDYTLAEEVKHSDDFLT FT YTVKLKKDLKWHDGKPLTADDLVFTMKQIMDEKQDSPFRSAFVINDKPVEVKKVDDLTI FT EFKLPTVQMPFMNSLGQVSPIPKHVFEGEKDIKKSIKNEKPIGSGAFRFKESKKGESIT FT LERFDNYVGGKPHLDTITYRIIADPNSSKVALENGEVSANYIDISGISKFEKNEKLKVV FT AYDEGMVDNLVLNCKTKGLDKKEVRQAIAYALNKDDLINAAYESEKYAPKAYSPLPKNA FT LYYTEDVTKYGLNKDKAKELLKKSGAENLKLKLVYRNDKKTLENQALVVKENLKDIGID FT VELKGLEANAFFKQIDDPSKADFDLIFNAYLMGNEPDAYKEVFMTNGAFNASRYNNKKL FT DDLWNKAAVETDKTKREEIYKTIQKELIEDMPVYPICYSNATIAVNKNVGGIKEAKTAP FT IYMFQDLSKLYIIEE" FT misc_feature complement(1347506..1349056) FT /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5, score FT 289.6, E-value 4.1e-84" FT /inference="protein motif:Pfam:PF00496" FT misc_feature complement(1348748..1348816) FT /note="PS01040 Bacterial extracellular solute-binding FT proteins, family 5 signature." FT /inference="protein motif:ProSite:PS01040" FT sig_peptide complement(1348999..1349092) FT /gene="appA" FT /locus_tag="CBO1227" FT /note="probabilty 1.000, with cleavage site probability FT 0.443 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature complement(1349027..1349059) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1349384..1349545 FT /transl_table=11 FT /locus_tag="CBO1228" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR020256" FT /db_xref="UniProtKB/TrEMBL:A5I166" FT /protein_id="CAL82777.1" FT /translation="MKCEKDFRGSMEDCELARAYICPQKFKRIYKVDKALKRGTLFPDL FT YRPYESSY" FT CDS 1349579..1349851 FT /transl_table=11 FT /gene="cotJB" FT /locus_tag="CBO1229" FT /product="putative spore coat protein" FT /db_xref="InterPro:IPR016571" FT /db_xref="InterPro:IPR024207" FT /db_xref="UniProtKB/TrEMBL:A5I167" FT /protein_id="CAL82778.1" FT /translation="MIDKCSREELLFMIQQYEFTAVELNLYLDNYPENKRALKYFNEIS FT CILMELKETYEERFGPLFNFGFSKSRFPWQWTTEPWPWEREYSKM" FT CDS 1349882..1350454 FT /transl_table=11 FT /gene="cotJC" FT /locus_tag="CBO1230" FT /product="putative spore coat protein" FT /db_xref="GOA:A5I168" FT /db_xref="InterPro:IPR007760" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:A5I168" FT /protein_id="CAL82779.1" FT /translation="MWIYEKKLEYPVNLKSKDLGMAKFLLAQYGGPDGELSAALRYLSQ FT RYTMPTSKSKGLLTDIGTEELAHVEIIATMAYQIMENATPKEMREAGLGSYYTQHGNAI FT YPADANGVPWTAAYIQSTSDPITNLHENMAAEQKARTVYEHLWNLTDDHDVRDVLGFLR FT QREVVHFQRFGEALMSVEDKLNSKTYY" FT misc_feature 1349882..1350445 FT /note="Pfam match to entry PF05067 Mn_catalase, Manganese FT containing catalase, score 172.9, E-value 5.6e-49" FT /inference="protein motif:Pfam:PF05067" FT CDS 1350684..1351703 FT /transl_table=11 FT /locus_tag="CBO1231" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR018711" FT /db_xref="UniProtKB/TrEMBL:A5I169" FT /protein_id="CAL82780.1" FT /translation="MSKKRQKEIKRRKKRKKKKKSFIGRLFLFLVYEVIVGGIFSLLIA FT FYGPFDNVKSTLVGTAMATYKHQYIATTFLSKDEINKILNKDKGISNSSLKENYGDIKI FT RNKYGNSVERYDINTAKFDGYILEIKNPQKVKIGYTKYMGKMGERTSKMAERHGAVAAV FT NGGGFRDVSSTGKLWTGTGAYPEGLVISNGKVIYNDFKSGQKVNVTAFTKEGLLVVGDH FT TVDELLKMGVVEALSFRNTLIINGKPIPYNEGINPRTAIGQKQDGTIVLLVIDGRRGIK FT QGATLEEVENILLQRGVVNASNLDGGSSSTMYYKGKVINRPCNWDGERTVATSIYVEP" FT misc_feature 1350768..1350827 FT /note="1 probable transmembrane helix predicted for CBO1231 FT by TMHMM2.0 at aa 2-21" FT /inference="protein motif:TMHMM:2.0" FT CDS 1351720..1352784 FT /transl_table=11 FT /locus_tag="CBO1232" FT /product="putative exported protein" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:A5I170" FT /protein_id="CAL82781.1" FT /translation="MKKIKIIFVWTLIAIGLSFAALLFVDKVYLSSAKTFKINKVEEED FT KKIKKTVSIDVPDYAENIKISYNGEYISYHTENKIVIINVSKKEEKYVEFKNGTVNYTA FT WLPDRNILFIGEKSGGNNGSFLALFSYDSEKNEKFQLEDENGKKTIINLPNNNYDIKNM FT TLSTATNTIYLKVKNEQGRSRIYRINTMAQLERIRSLGNNLGEIALMNSEDRVVYENKN FT DGNIHIEGKDYPITIRDGANHCLLGVDDKDVMYIGKLKGSMEEETIEKIYYWSLDEKTI FT NKKDIELENPINKKDIKILPNGKIFFINSNENKVKGLISREEVKYNGVFEDISMDAIVS FT KEGNKVIIKPINLK" FT sig_peptide 1351720..1351807 FT /locus_tag="CBO1232" FT /note="probabilty 0.999, with cleavage site probability FT 0.772 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT repeat_region complement(1352825..1353065) FT /note="intergenic repeat 1" FT CDS 1353431..1353922 FT /transl_table=11 FT /locus_tag="CBO1233" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR000007" FT /db_xref="InterPro:IPR007612" FT /db_xref="UniProtKB/TrEMBL:A5I171" FT /protein_id="CAL82782.1" FT /translation="MKFIIKQKLFSITDKYIIENEYGEKLYKAQKILMSMFKKIKIYDI FT DDRELVYIKEKFIKILPTYLIYMGGNHVATMKKDIGILKPRFTVESIIGDYEVKGDILD FT INFTIEKAEETVARVKKHFPAIRDSYEVDIKEGASQSLILAMVIIIDDVVHNTEKEDDD FT " FT misc_feature 1353434..1353877 FT /note="Pfam match to entry PF04525 DUF567, Protein of FT unknown function (DUF567), score 42.7, E-value 8.4e-10" FT /inference="protein motif:Pfam:PF04525" FT CDS complement(1354160..1354564) FT /transl_table=11 FT /locus_tag="CBO1234" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR000361" FT /db_xref="UniProtKB/TrEMBL:A5I172" FT /protein_id="CAL82783.1" FT /translation="MENNNLEIYISKEASENLSKLLKENDYSCVRLSYVKSCCARGRLD FT IVLDNIKEKDLKHEYASIILVYNTEVSNNIKKVEIIYKNNDFMMKITPRDTNGCRNGCC FT KNNTSSNCNNNCNNSCNNKCPYKNKTCSKS" FT CDS 1354911..1355537 FT /transl_table=11 FT /locus_tag="CBO1235" FT /product="putative deoxyuridine 5'-triphosphate FT nucleotidohydrolase" FT /db_xref="GOA:A5I173" FT /db_xref="InterPro:IPR008180" FT /db_xref="InterPro:IPR008181" FT /db_xref="UniProtKB/TrEMBL:A5I173" FT /protein_id="CAL82784.1" FT /translation="MNNKVNVYIKVSEDGKMPSYGSLNAAGCDLYATKYMEIKPGETKV FT MPLNFVMAMDENLEAQIRPRSGLSLKTNLRVPNSPGTIDSDYRDTVGVILENTYDIANL FT PYDIAKDPNVLKVLKEKYKEISLIDYLNSKEDINLDNNNFLSILKQKIYLDEKGNPYGT FT IYINKGERIAQMVFKEYKRANFIECENPQKIGENRGGGFGHTGVK" FT misc_feature 1354947..1355351 FT /note="Pfam match to entry PF00692 dUTPase, dUTPase, score FT 19.8, E-value 5.5e-05" FT /inference="protein motif:Pfam:PF00692" FT misc_feature 1355397..1355528 FT /note="Pfam match to entry PF00692 dUTPase, dUTPase, score FT 18.2, E-value 0.00019" FT /inference="protein motif:Pfam:PF00692" FT CDS complement(1355591..1355782) FT /transl_table=11 FT /locus_tag="CBO1236" FT /product="putative small, acid-soluble spore protein" FT /note="Also similar to CBO0789 (31.7 38d.)." FT /db_xref="GOA:A5I174" FT /db_xref="InterPro:IPR012610" FT /db_xref="UniProtKB/Swiss-Prot:A5I174" FT /protein_id="CAL82785.1" FT /translation="MKSERAKQIIDSKKYIPVYYKNTPVHIEKVDNKENIAHIKSLNTD FT KEIVVNVKTLSECNKLNN" FT CDS 1355980..1356087 FT /transl_table=11 FT /locus_tag="CBO1237" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I175" FT /protein_id="CAL82786.1" FT /translation="MKKNNNSKPNKPMEGNKDAKLRQQSGQKNANKPKN" FT CDS complement(1356296..1357051) FT /transl_table=11 FT /locus_tag="CBO1238" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I176" FT /protein_id="CAL82787.1" FT /translation="MSKNHKFDKHFNNLNEENQEKYIEEMHEMADKAAKKNNLIFGAVV FT IPIVIVCILVVKQMVSFSFNLAKDDSATKNNNTEITKDVNNNSKGTDKKAEGQEVALNE FT KIAKYIQNKDNRQKSFKEAVSINKGSEKGVSVIFISQLYRNNGYDIPKNTISTKGLLED FT LKKKNWTKETDYTKLQKGDICFTTVDSAGSPSHAYIFMGWVKEGKTDYAYVCDGQTSDY FT DDTLHKRNLSVSTAEKDKIAFFMKAPNEK" FT misc_feature complement(1356425..1356448) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(1356869..1356937) FT /note="1 probable transmembrane helix predicted for CBO1238 FT by TMHMM2.0 at aa 39-61" FT /inference="protein motif:TMHMM:2.0" FT CDS 1357433..1357591 FT /transl_table=11 FT /locus_tag="CBO1239" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR018540" FT /db_xref="UniProtKB/TrEMBL:A5I177" FT /protein_id="CAL82788.1" FT /translation="MVRKMGKVLEQTRERLNNLIEMDSILYEGEILKLSQELDKLIYKY FT YKHELIN" FT CDS complement(1357709..1358242) FT /transl_table=11 FT /locus_tag="CBO1240" FT /product="putative transcriptional regulator" FT /db_xref="GOA:A5I178" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR013096" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:A5I178" FT /protein_id="CAL82789.1" FT /translation="MQLGEKIKYYRKKKGLTIKELSELTNLSIGFISNLERDLNSPSVS FT NLQQICEVLGINLMEILKSTEDKEYIVCKDSRSEIFSTDDKKIKFEMLTNGNKNLNAIA FT ITIEGNTDYNDTSWGHSYDELGIVVKGTLEIQMNSQTYTLHEGDSIYLNKFTPHRYKNP FT YEEINVTYWFSVKE" FT misc_feature complement(1358060..1358224) FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 58.4, E-value 1.6e-14" FT /inference="protein motif:Pfam:PF01381" FT misc_feature complement(1358132..1358197) FT /note="Predicted helix-turn-helix motif with score FT 1685.000, SD 4.93 at aa 16-37, sequence FT LTIKELSELTNLSIGFISNLER" FT CDS 1358666..1359715 FT /transl_table=11 FT /locus_tag="CBO1241" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I179" FT /protein_id="CAL82790.1" FT /translation="MVIFKGTLLLLICLSAFSLFSLKAPKGMKAMGALADAAVATFLVE FT AFQSYVGGDMLHIKLLKDTGLAAGGMGGAAAATLVPLALGVSPVYAVLIGASCYGLGIL FT PGFVAGYALSFIVPIIEKKVPKGLDLIVCVALVAPLARLIGNGATPVVNSTLLNIGGII FT TVAANESPIIMGFILGGVITVVATAPLSSMALTAMLGLKGLPMAIGALSVMGSSFMNFV FT LFHRLKFGDRSTTISVAIEPLTQADVISANPIPVYVTNFIGGGLAGIIVTHFGLINNAT FT GTATPIAGLMVMYGFNDPKTVTIAAIFCALAGAFAGLLGSIVFKNYKIRTVAELRAASE FT EQEIEQATA" FT sig_peptide 1358666..1358732 FT /locus_tag="CBO1241" FT /note="probabilty 0.997, with cleavage site probability FT 0.266 between residues 23 and 24" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1358669..1358728,1358855..1358923,1358957..1359025, FT 1359053..1359121,1359182..1359250,1359278..1359337, FT 1359425..1359493,1359569..1359637) FT /note="8 probable transmembrane helices predicted for FT CBO1241 by TMHMM2.0 at aa 2-21, 64-86, 98-120, FT 130-152,173-195, 205-224, 254-276 and 302-324" FT /inference="protein motif:TMHMM:2.0" FT CDS 1360149..1360736 FT /transl_table=11 FT /locus_tag="CBO1242" FT /product="TetR-family transcriptional regulator" FT /db_xref="GOA:A5I180" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR015893" FT /db_xref="UniProtKB/TrEMBL:A5I180" FT /protein_id="CAL82791.1" FT /translation="MAKGPKGFSDAEKDELRAKLCVECERSWAVHGYKKTSVGELTRKI FT GISTGAFYLLYSSKEDLFCETLERVQDRLKSGLQDIVGNDRSKAGFIKSIKWLFREYNN FT SPFLYDFNNPDFLSFLNKLPKDSVEKLKFDNLSFFDNAIEHANLTLKIDKEKAYAVIGT FT LLYTVSMKDDLSYNHLEIFDFLLDSVMDRLFE" FT misc_feature 1360206..1360346 FT /note="Pfam match to entry PF00440 tetR, Bacterial FT regulatory proteins, tetR family, score 25.9, E-value FT 0.0001" FT /inference="protein motif:Pfam:PF00440" FT CDS 1360744..1361013 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO1243" FT /product="conserved hypothetical protein (partial)" FT /note="was marked partial" FT /note="Similar to the C-terminal region of several database FT matches." FT CDS 1361032..1361253 FT /transl_table=11 FT /locus_tag="CBO1243A" FT /product="conserved hypothetical protein" FT /note="Similar over the entire length of Clostridium FT perfringens stage III sporulation protein AC, spoIIIAC,and FT Staphylococcus epidermidis hypothetical protein SE2234. It FT is also similar to the N-terminus of Streptococcus FT thermophilus bacteriophage Sfi21 Orf203 protein." FT /db_xref="UniProtKB/TrEMBL:A5I181" FT /protein_id="CAL82793.1" FT /translation="MDLFQIPSFVPVPSREVMFNLSIISVIIGICLVIAGLILNNKDKK FT KGIATWICITIGIVIIVNHGIQLLFAIF" FT CDS 1361265..1361498 FT /transl_table=11 FT /locus_tag="CBO1244" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I182" FT /protein_id="CAL82794.1" FT /translation="MIEKINANCKKLNDLFGVNIKLPNPSKHTLGASTVVNCTMGVGLI FT LFGALSSQKWTAALGGLSIVGSVISSEEAKKK" FT misc_feature 1361349..1361417 FT /note="1 probable transmembrane helix predicted for CBO1244 FT by TMHMM2.0 at aa 57-79" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 1361871..1361916 FT /note="intergenic repeat 3" FT CDS complement(1362004..1363440) FT /transl_table=11 FT /locus_tag="CBO1245" FT /product="putative sodium:alanine symporter" FT /db_xref="GOA:A5I183" FT /db_xref="InterPro:IPR001463" FT /db_xref="UniProtKB/TrEMBL:A5I183" FT /protein_id="CAL82795.1" FT /translation="MSFIENFISVLNNYLWSYILIALLIALGLFFSFKSKFVQIRYFKE FT MFRLLGEGASKSAREEHKKKKGVSSFQAFCISTASRVGTGNLAGVAIAIASGGPGAVFW FT MWLIALIGGASSFVESTLAQIYKVEDEHGFRGGPAYYMEKALNKKWMGIIFSILITISY FT GLVFNSVQANTISLAFEQAFGVNTLIIGLILAVLTSLIIFGGVQRIARATEIIVPIMAI FT AYVVVALFVILKNIGSIPTIFSLIIENAFGIKQVVGGSLGAAILMGIKRGLFSNEAGMG FT SAPNAAATANVTHPAKQGLIQTLGVFTDTILICSATSFIVLISGSYLKSDLTGIQLTQT FT ALSSQVGSWGNTFIAICIFLFAFSSVIGNYYYGETNIEFLKGSKTSLFLYRLCVIGMVL FT FGCVAKIQIVWDMADLFMGFMAIINLIAISMLSKIAFAALKDYDRQKKQGIEPVFYADS FT IEGLSNIECWPTREEAEKSA" FT misc_feature complement(1362064..1363314) FT /note="Pfam match to entry PF01235 FT Na_Ala_symp,Sodium:alanine symporter family, score 721.7, FT E-value 3.4e-214" FT /inference="protein motif:Pfam:PF01235" FT misc_feature complement(order(1362130..1362198,1362211..1362279, FT 1362337..1362405,1362463..1362531,1362742..1362801, FT 1362829..1362897,1362934..1362993,1363117..1363185, FT 1363342..1363398)) FT /note="9 probable transmembrane helices predicted for FT CBO1245 by TMHMM2.0 at aa 15-33, 86-108, 150-169, FT 182-204,214-233, 304-326, 346-368, 388-410 and 415-437" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1363105..1363152) FT /note="PS00873 Sodium:alanine symporter family signature." FT /inference="protein motif:ProSite:PS00873" FT misc_feature complement(1363384..1363413) FT /note="PS00904 Protein prenyltransferases alpha subunit FT repeat signature." FT /inference="protein motif:ProSite:PS00904" FT misc_feature 1363458..1368256 FT /note="Low GC content region (22.21). Doubful CDSs within FT this feature" FT CDS 1363470..1363613 FT /transl_table=11 FT /locus_tag="CBO1246" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I184" FT /protein_id="CAL82796.1" FT /translation="MLLNYLLYINTFKIVSENNMNINLKCILKNELKKSKNASFKGKLY FT YN" FT CDS 1364610..1364918 FT /transl_table=11 FT /locus_tag="CBO1247" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I185" FT /protein_id="CAL82797.1" FT /translation="MCKMITQDSEKVCIGENAIAINGAINIPKGEDREKFFKEFTKWLK FT NNNCSFFGMTNYVKTEKEAKEKTKEILFDYASEELEKNLENFEDEENVIQLSKFKAL" FT repeat_region 1365423..1365452 FT CDS 1365562..1365783 FT /transl_table=11 FT /locus_tag="CBO1248" FT /product="putative transcriptional regulator" FT /db_xref="GOA:A5I186" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5I186" FT /protein_id="CAL82798.1" FT /translation="MGGIRYMAIKNKLLDIRLSMGYKTQKEFAEFLGIRRVQYNKYENN FT KEQPALEALYKISLKLNIKMENIIYLDE" FT misc_feature 1365598..1365765 FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 40.9, E-value 3.1e-09" FT /inference="protein motif:Pfam:PF01381" FT misc_feature 1365628..1365693 FT /note="Predicted helix-turn-helix motif with score FT 1435.000, SD 4.07 at aa 23-44, sequence FT KTQKEFAEFLGIRRVQYNKYEN" FT CDS 1365944..1366048 FT /transl_table=11 FT /locus_tag="CBO1248A" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I187" FT /protein_id="CAL82799.1" FT /translation="MKLYTTVKGQGEQSEFLKRALEFYIKYLENRFKK" FT CDS 1366045..1366212 FT /transl_table=11 FT /locus_tag="CBO1249" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I188" FT /protein_id="CAL82800.1" FT /translation="MMRNKKIKPSRRLDLFQVAKSVLRYTTFLAYSRGMKKLCILGALI FT QMLIFDLQIN" FT CDS 1366222..1366314 FT /transl_table=11 FT /locus_tag="CBO1249A" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I189" FT /protein_id="CAL82801.1" FT /translation="MMCVAITISALNQNNPDIIKNLLSGLLVYL" FT repeat_region 1366303..1366352 FT CDS 1366654..1366920 FT /transl_table=11 FT /locus_tag="CBO1250" FT /product="putative DNA-binding protein" FT /note="No significant database matches" FT /db_xref="GOA:A5I190" FT /db_xref="InterPro:IPR010093" FT /db_xref="UniProtKB/TrEMBL:A5I190" FT /protein_id="CAL82802.1" FT /translation="MKYMLTPQEFAQECELSYQQVLQMCKNKEISALKTEGGHFKIPEK FT ELDIFKNSGYVTKEEYLRVIRENEKLKTVIKNCMNLLSATNNL" FT misc_feature 1366666..1366731 FT /note="Predicted helix-turn-helix motif with score FT 1297.000, SD 3.60 at aa 33-54, sequence FT LTPQEFAQECELSYQQVLQMCK" FT CDS 1367204..1367950 FT /transl_table=11 FT /locus_tag="CBO1251" FT /product="putative lipoprotein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I191" FT /protein_id="CAL82803.1" FT /translation="MNIKKLFFIFTLVVIVFATACTNKIKETNVRDTNEKPKEETKIID FT SNGAEKAKLNLEFGAGKLNVDGNEEKLMKGKFIYSKKEWRPEIKYEVKDKEGEITISQP FT SLNGGNISLNKKEYNEWDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGVGKL FT DLDISGNYKNNIKVDIQGGVGEATVYLSKSMGVKIKAEKGVGTINANGFIVEDGNIYKN FT SQYGKSKNNIDVNIEAGVGAINIKEK" FT sig_peptide 1367204..1367282 FT /locus_tag="CBO1251" FT /note="probabilty 0.992, with cleavage site probability FT 0.477 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1367234..1367266 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1368269..1368496 FT /transl_table=11 FT /gene="grxC" FT /locus_tag="CBO1252" FT /product="putative glutaredoxin" FT /db_xref="GOA:A5I192" FT /db_xref="InterPro:IPR002109" FT /db_xref="InterPro:IPR011767" FT /db_xref="InterPro:IPR011911" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:A5I192" FT /protein_id="CAL82804.1" FT /translation="MIKVYTAEGCPWCTKAKTYLKTKGIAFQELNIEKDEKARDEMVQK FT SSQRGVPVLDIDGSIIIGFNKPAIDEAINL" FT misc_feature 1368269..1368487 FT /note="Pfam match to entry PF00462 FT glutaredoxin,Glutaredoxin, score 30.1, E-value 5.2e-06" FT /inference="protein motif:Pfam:PF00462" FT misc_feature 1368278..1368328 FT /note="PS00195 Glutaredoxin active site." FT /inference="protein motif:ProSite:PS00195" FT CDS complement(1368528..1369988) FT /transl_table=11 FT /gene="gapN" FT /locus_tag="CBO1253" FT /product="NADP-dependent glyceraldehyde-3-phosphate FT dehydrogenase" FT /EC_number="1.2.1.9" FT /db_xref="GOA:A5I193" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR016163" FT /db_xref="UniProtKB/TrEMBL:A5I193" FT /protein_id="CAL82805.1" FT /translation="MFKNLYVENNLYKNFIGGQWVNSKTNNFIEISSPIDGSLVGKVPS FT MSKEEVDLAIKNAKKAQSHWNEIPINEKATILLKAANILDEKAEEIADIMTKEIAKDKK FT SSISEVRRTADYIRFSADTAKNMVGETLPGDSFPGNSKGKISIVNRVPLGVVLAISPFN FT YPVNLSGSKIAPALMAGNSVVLKPATQGSISALHLVKVFEEAGLPSGVLNTITGKGSEI FT GDYIVSHPMIDFINFTGSTEVGKRISHISVMKPMLMELGGKDAAIVLEDADLDLAAKNI FT VSGAYSYSGQRCTAVKRILVLEEIADTLVEKVKERVESLKIGNPLKEQVDIVPLIDDKA FT ADYVEALMEEANNKGATLLVGGKREGNLIYPTLFDNVTLDMRLAWEEPFAPILPIIRVK FT DVDEAIRIANESEYGLQASIFTKEINKAFYVAEKLEVGTVQINNKPERGPDHFPFSGIK FT ASGLGTQGIKYSIEAMSRPKAIVLNINL" FT misc_feature complement(1368537..1369934) FT /note="Pfam match to entry PF00171 aldedh, Aldehyde FT dehydrogenase family, score 577.3, E-value 1e-170" FT /inference="protein motif:Pfam:PF00171" FT misc_feature complement(1369098..1369133) FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT /inference="protein motif:ProSite:PS00070" FT misc_feature complement(1369194..1369217) FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT /inference="protein motif:ProSite:PS00687" FT CDS complement(1370028..1370969) FT /transl_table=11 FT /gene="trxB1" FT /locus_tag="CBO1254" FT /product="thioredoxin reductase" FT /EC_number="1.8.1.9" FT /db_xref="GOA:A5I194" FT /db_xref="InterPro:IPR000103" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR005982" FT /db_xref="InterPro:IPR008255" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:A5I194" FT /protein_id="CAL82806.1" FT /translation="MNKKNKNLDLMIIGAGPAGLSAAIYAARAKLNMILIENGIIGGQV FT RSSYTVENYPGFKKIEGNRLADLMQEQATDLGATIDEFDMVEKIQLNNNEKIVETSEYI FT YKPTVLIISTGATARKLPIPSEGKFSGKGIHYCAICDGAMYEGKTVGVIGGGNAALEEA FT LFLTKFASKVYMIRRYDYFKGEKATLEEVENNSKIEILYNWDLVDVYGSNFIDKALIKN FT VKTKEEKELKLDGVFGFIGSEPKTELFKEYISLTPKGYIKTNENMETNIKGVYAAGDVR FT EKQFRQITTAVADGTIAALAAEKYIMEKTREK" FT misc_feature complement(1370100..1370945) FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 206.5, E-value FT 4.3e-59" FT /inference="protein motif:Pfam:PF00070" FT misc_feature complement(1370499..1370561) FT /note="PS00573 Pyridine nucleotide-disulphide FT oxidoreductases class-II active site." FT /inference="protein motif:ProSite:PS00573" FT misc_feature complement(1370523..1370546) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(1370883..1370951) FT /note="1 probable transmembrane helix predicted for CBO1254 FT by TMHMM2.0 at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(1370888..1370969) FT /gene="trxB1" FT /locus_tag="CBO1254" FT /note="probabilty 0.985, with cleavage site probability FT 0.506 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT repeat_region 1371275..1371310 FT /rpt_unit_seq="(aaatgatgtaat)3" FT CDS 1371766..1372143 FT /transl_table=11 FT /gene="grdX" FT /locus_tag="CBO1255" FT /product="putative component of glycine reductase complex" FT /db_xref="UniProtKB/TrEMBL:A5I195" FT /protein_id="CAL82807.1" FT /translation="MNNKVIMVTNNKLVSEKFNEKCQVEFILGDVNEVFNTVRDYVHKG FT HELLTHPLMSSVKPNETPYRTVVISKYYKNVVDMESLNYIEESIHSLEKFQKSCGTPAW FT NDNILKDFRLIDYDLIYNALN" FT CDS 1372234..1373520 FT /transl_table=11 FT /gene="grdE" FT /locus_tag="CBO1256" FT /product="putative component of glycine reductase complex" FT /db_xref="GOA:A5I196" FT /db_xref="InterPro:IPR015417" FT /db_xref="InterPro:IPR016585" FT /db_xref="UniProtKB/TrEMBL:A5I196" FT /protein_id="CAL82808.1" FT /translation="MRLEIGKIFISDMQFSNETKVKDGVLYISKEELLKEIGTDERIKS FT IDLEIAKPGDKTRIIPVKDVIEPRVKVEGNGGIFPGFISKVDTVGSGKTNVLKGAAVVT FT TGKIVGFQEGIIDMSGEGAKYTPFSKTNNLVVVCEPKEGVNQYEHEEIVRTLGFKAATY FT LGSLAKDITPDETKVYETLPLLEQVKKYPDLPKVVYVYMLQSQGLLHDTYVYGVDAKKI FT IPTFIYPTEVFDGAIVSGNCVSACDKNPSYVHMNHPVIEDLYEKHGVEYNFLGCVITNE FT NVYLADKVRSSSYTAKLVEFLGADAVIISEEGFGNPDADLVMNCNKISEKGIKTVLITD FT EYAGQNGASQSLADSTPKGDAVVTGGNANEVVTLPPMEKIIGHVEVADVIAGGHVGSLK FT EDGSIEAEIQVITGATSEVGFNYLSAKGY" FT CDS join(1373553..1374593,1374597..1374854) FT /transl_table=11 FT /gene="grdB" FT /locus_tag="CBO1257" FT /product="putative glycine reductase complex component b FT gamma subunit" FT /EC_number="1.21.4.2" FT /note="Selenoprotein. This CDS contains an opal stop codon FT that is read-through as selenocysteine." FT /db_xref="GOA:A5I197" FT /db_xref="InterPro:IPR010186" FT /db_xref="InterPro:IPR010187" FT /db_xref="InterPro:IPR022787" FT /db_xref="UniProtKB/TrEMBL:A5I197" FT /protein_id="CAL82809.1" FT /translation="MIKVVHYINQFYAGIGGEDKADYKPEVREEPVGPGTQLNSLFKGE FT AEIVATVICGDSYFNENIDEAKNTILEMIKKYDADLFIAGPAFNAGRYGVACGTIAKEV FT EEKLNIKVLTAMYEENPGVDLYKKSLYILKTKKSAVGMRKALPVMAKLALKMGKGEEIG FT LPEEEGYIERGIRKNYFSDERGSKRAVNLLVKKLKGEEFVTEFKMPVFDRVEPNKAVED FT ISKCKIAIVTSGGIVPKGNPDHIESSSASKYGKYDIEGLMDLNSETHETAHGGYDPNYA FT NEDSDRVIPVDVLRKMEKEGKIGSLHRYFYSTVGNGTAVASSKKFGNEIVNQLKEDGVD FT AVILTSTGTCTRCGATLVKEIERGGLPVVHMCTVVPISLTVGANRIVPTIAIPHPLGNP FT NLDKEREFELRYKLVEKALKALETEIDEQKVFE" FT CDS 1375005..1375946 FT /transl_table=11 FT /gene="trxB2" FT /locus_tag="CBO1259" FT /product="thioredoxin reductase" FT /EC_number="1.8.1.9" FT /db_xref="GOA:A5I198" FT /db_xref="InterPro:IPR000103" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR005982" FT /db_xref="InterPro:IPR008255" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:A5I198" FT /protein_id="CAL82810.1" FT /translation="MDNVYDLIIIGSGPAGLSAGLYAARARLKTLILERNKAGGQIVIT FT DEVANYPGSIRDATGASLVARMEEQVDEFGAERKKDNVKEVDFTGKIKIIKGEKEEYKA FT KSVIIATGAAPRHIGCKGENELIGKGVSYCATCDADFFTDLEVFVIGGGDSALEEALYL FT TKFARKVTVVHRRDALRGAKSIQEKVFKNPKIEIMWDSVVEEIKGDGIVESAVFKNKKT FT GEITEYFADEDDGTFGIFVFVGYLPINNLFKDIVTINEAGYIKTNDRMETNIEGIFAAG FT DIREKSLRQVVTAAADGAIAAVEAYKYVEDTF" FT misc_feature 1375020..1375883 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 249.6, E-value FT 4.5e-72" FT /inference="protein motif:Pfam:PF00070" FT misc_feature 1375404..1375466 FT /note="PS00573 Pyridine nucleotide-disulphide FT oxidoreductases class-II active site." FT /inference="protein motif:ProSite:PS00573" FT misc_feature 1375749..1375838 FT /note="PS00189 2-oxo acid dehydrogenases acyltransferase FT component lipoyl binding site." FT /inference="protein motif:ProSite:PS00189" FT CDS 1375980..1376300 FT /transl_table=11 FT /gene="trxA" FT /locus_tag="CBO1260" FT /product="thioredoxin" FT /db_xref="GOA:A5I199" FT /db_xref="InterPro:IPR005746" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013766" FT /db_xref="InterPro:IPR017937" FT /db_xref="UniProtKB/TrEMBL:A5I199" FT /protein_id="CAL82811.1" FT /translation="MLVVDKKTFEDEVLKSDGYTLVDYFGDGCVPCEALMPDVEELSQK FT YEDKVKFCKLNTSKARRLAISQKVLGLPTIILYKDGEKLEEVVKDDATKENIEAMIKKH FT TL" FT misc_feature 1375983..1376297 FT /note="Pfam match to entry PF00085 thiored, FT Thioredoxin,score 60.5, E-value 3.7e-15" FT /inference="protein motif:Pfam:PF00085" FT misc_feature 1376040..1376096 FT /note="PS00194 Thioredoxin family active site." FT /inference="protein motif:ProSite:PS00194" FT CDS join(1376386..1376514,1376518..1376862) FT /transl_table=11 FT /gene="grdA" FT /locus_tag="CBO1261" FT /product="glycine/sarcosine/betaine reductase complex FT component A" FT /EC_number="1.21.4.2" FT /note="Selenoprotein. This CDS contains an opal stop codon FT that is read-through as selenocysteine." FT /db_xref="GOA:A5I1A0" FT /db_xref="InterPro:IPR006812" FT /db_xref="UniProtKB/TrEMBL:A5I1A0" FT /protein_id="CAL82812.1" FT /translation="MSLFEGKKVIIIGDRDGIPGPAIEKCIEGTGAEVVFSSTECFVTA FT AGAMDLENQKRVKTLTEKHGAENILVILGAAEGEAAGLAAETVTNGDPTFAGPLSNVQL FT GLRVYHAVEPEFKEEVNEEVYEEEIGMMEMVLEVDEIIEEMTDIRTEFCKFLD" FT misc_feature 1376389..1376514 FT /note="Pfam match to entry PF04723 GRDA, Glycine reductase FT complex selenoprotein A, score 82.8, E-value 1.1e-22" FT /inference="protein motif:Pfam:PF04723" FT misc_feature 1376539..1376859 FT /note="Pfam match to entry PF04723 GRDA, Glycine reductase FT complex selenoprotein A, score 153.4, E-value 4.2e-43" FT /inference="protein motif:Pfam:PF04723" FT CDS 1376957..1378495 FT /transl_table=11 FT /gene="grdC" FT /locus_tag="CBO1263" FT /product="glycine/sarcosine/betaine reductase complex FT component C beta subunit" FT /EC_number="1.21.4.2" FT /db_xref="GOA:A5I1A1" FT /db_xref="InterPro:IPR013751" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR017236" FT /db_xref="UniProtKB/TrEMBL:A5I1A1" FT /protein_id="CAL82813.1" FT /translation="MNYPVIKGASYILVHTPDMVLHNGTTQTTEKVVNPDSEYLKELPK FT HLRNFEDVLNYAPNQTYIGNMTPDQLGEIEMPWWDKKIEESSRFGKLGEMMPQDEFIGL FT MEICDVFDLVVLEKSFVGDVKNKLEKHPLIDENMISKIKEGVAIEEIKKVVDEEGAEGL FT YNEGTLVGCVKKAHDVDVNLSAHTMLENLVVKASGVLSLLNLIAKNNIDPNSIDYVIEC FT SEEACGDMNQRGGGNFAKSLAEVAGFTNATGADMRGFCAGPSHSLIAASALVQSGVYDN FT VVIAGGGASAKLGMNGKDHVKKEMPILEDCLGGFAVLVSKNDGINPILRTDLVGKHTVG FT TGSSPQAVISSLVTDPLDKAGLKITDVDKYSVEMQNPDITKPAGAGDVPQANYKMIGAL FT GVKKKHIEKKELKDFIQNHGMSGWAPTQGHIPSGVPYIGFARNDLTEGNLNRVMVVGKG FT SLFLGRMTNLFDGVSIIIERNTGYKEEEKGISEDKVRKIIAESIKKLASQLVEE" FT CDS 1378511..1379677 FT /transl_table=11 FT /gene="grdD" FT /locus_tag="CBO1264" FT /product="putative glycine/sarcosine/betaine reductase FT complex component C alpha subunit" FT /EC_number="1.21.4.2" FT /db_xref="GOA:A5I1A2" FT /db_xref="InterPro:IPR003664" FT /db_xref="InterPro:IPR012116" FT /db_xref="UniProtKB/TrEMBL:A5I1A2" FT /protein_id="CAL82814.1" FT /translation="MDNKEVNKIIGKTLLDIAESIEKGDFSRKIVVGITTLGSEHGVEN FT LVKGAEVAAKKHNDIKVVLIGPKVDTELEIVEANEEDKMYNKMEELLDTKYIDAAVTMH FT YNFPIGVSTVGKVVTPADGKEMFLATTTGTASMNRTEAMIKNAVYGIITAKTMGIKEPN FT VGILNLDGARQVEKALKELDKNGYKINFANSLRADGGSVMRGNDLLKGTPDVMVTDTLT FT GNLLMKVFSSYTTGGSYEGFGYGYGPGIGEDYERNILILSRASGVPVVANAIEYAKDLV FT KGNINKLIKEEFKKANEAKLKDILSSIENKEDKKIKDEEEVPMPTKEIATASISGIDVM FT DIEDAQKTLWKEGIYAEGGMGCTGPVIKVNDKNYDKAAEILTEKGFIA" FT misc_feature 1378598..1379614 FT /note="Pfam match to entry PF02504 FA_synthesis, Fatty acid FT synthesis protein, score 235.5, E-value 7.9e-68" FT /inference="protein motif:Pfam:PF02504" FT repeat_region 1379929..1379965 FT CDS 1380104..1380715 FT /transl_table=11 FT /locus_tag="CBO1265" FT /product="putative 3-methyladenine DNA glycosylase" FT /db_xref="GOA:A5I1A3" FT /db_xref="InterPro:IPR003180" FT /db_xref="InterPro:IPR011034" FT /db_xref="UniProtKB/Swiss-Prot:A5I1A3" FT /protein_id="CAL82815.1" FT /translation="MRLTRDFYAKDARVLAKELLGKVLVREVDGIKLKGKIVETEAYIG FT AIDKASHAYGGRRTKRTEPLYGKPGIAYVYFIYGKYFCFNIISKTEGEAEGVLIRALEP FT LENINLISKLRFNKEFEELNNYQRKNITSGPSKLCMAFNINRDNNWEDLCESSSLYVED FT VFYNDFEIIETVRVGIDYAEEARDFLWRYYIKDNAFVSVK" FT misc_feature 1380113..1380700 FT /note="Pfam match to entry PF02245 FT Pur_DNA_glyco,Methylpurine-DNA glycosylase (MPG), score FT 232.8, E-value 5.3e-67" FT /inference="protein motif:Pfam:PF02245" FT CDS 1380781..1383006 FT /transl_table=11 FT /locus_tag="CBO1266" FT /product="putative DNA methyltransferase" FT /db_xref="GOA:A5I1A4" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR002296" FT /db_xref="InterPro:IPR011639" FT /db_xref="UniProtKB/TrEMBL:A5I1A4" FT /protein_id="CAL82816.1" FT /translation="MGGSYNLYKIKDISCISKYCNCLQLVFEDLYDLKKYFNENKTLFC FT NKALYVLINKIIISKIFMEKNNITGELAKKNIKYYALTLDTINLVNLVFDNVDKRFLES FT IFKDNIKYEYINPSYYSLDKEDFLHYEDNIFYRYNIFLNKIIDEINGFDFIHSSCEIGE FT IYEKIIAKEYKKSMGIFYTPEYIIDYILENVFYEFSPLENPFVKLIDISAGAGYFIIKA FT YDKLKKVFTENIQNLQEKYKQNIYTIRKKGQSIKVTGEYYWQKENLHYHIINNCIYAAD FT IDIYAIQITTINLLLKDTKSYVGKVNVANCDSLIRWEKDFNPTIKFLDNKYKYKTYKIK FT NKGIEEAVNYKEKEVCNWKTYFKLYKFWRKKFDYIIGNPPWVSLSRKNKKACWKNSLEY FT YIKNYGQCVHSPNLFEYFIKRALEKTKKDGYLAFVVPINFSRNSQYIQLRNEILNKYEI FT KNLFFNIAFSGVITDGMVFILKKNKKCFNEIKIKVQGKDEYKIDKNELFSCNEYGFTFN FT NNDFDEKIKNKILENSSFLSEISDTFTGFIGDCKNIYKENVDKSYIKIYKGKNIKKFIC FT YSYFYYDFKDENIKGGTKDLKKLKYKGKILVRKTGNEIIAAYDEEGIIIEQSLYGIINL FT KQNFSHKYILGILNSQLMSWYYKKYLITNKDSTPQLKKYRLNKIPIKNCNKNVQEEVEI FT LSDKIFQALKNENVKEIDYYYKILNQKVFSIYGIDDIKIIRYIINDK" FT misc_feature 1381903..1381923 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 1383442..1384653 FT /transl_table=11 FT /gene="mtnK" FT /locus_tag="CBO1267" FT /product="5-methylthioribose kinase" FT /EC_number="2.7.1.100" FT /db_xref="GOA:A5I1A5" FT /db_xref="InterPro:IPR002575" FT /db_xref="InterPro:IPR009212" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:A5I1A5" FT /protein_id="CAL82817.1" FT /translation="MAEYKPMDCESIIKYIKELNLDIFDEKMDLTAKEIGDGNLNLVFR FT VKDNNTGKSVIIKQALPYLRVAGEGWKLTVDRNRIEAEAMMKQDKACPNSVPKIYYHDK FT DYNLYVAEDLGSMDILRNGLMNMKKYPKFPDQIGKFLSRNLFYTSDLGLGAVAKKSLVS FT KFINPELCDITEKLVLTDPYMNAESNDINPEIMDEVKDMWGRKDFRLEVTKLKNIFMTK FT AEALLHGDLHTGSIFITEDDMRVFDTEFAFYGPYGYDIGLLFANFILNYISWEGREDRS FT KEEIKEFRKYLLDTIEEIWHEFEIGLKEIWDKDCKEISSTVEGYKEYYINNLLQETIGF FT SACEVMRRIIGMAHVPDLDVLKDLKQKAKAQRLGLKIGQEMVMRRNKITKIEDLSVFIS FT QITK" FT CDS 1384793..1385842 FT /transl_table=11 FT /gene="mtnA" FT /locus_tag="CBO1268" FT /product="putative methylthioribose-1-phosphate isomerase" FT /EC_number="5.3.1.23" FT /db_xref="GOA:A5I1A6" FT /db_xref="InterPro:IPR000649" FT /db_xref="InterPro:IPR005251" FT /db_xref="InterPro:IPR011559" FT /db_xref="UniProtKB/Swiss-Prot:A5I1A6" FT /protein_id="CAL82818.1" FT /translation="MAELLAIKWDDNRDKLILLDQTILPNKIEYIEYDTAEGVYDSIKD FT MIVRGAPAIGVTAAYGLYFAAKVAPEDKFENFFKYLKEKSSYLDSSRPTAVNLSWALKV FT MESKALENKDKDVKEIKSILREEAKRIHEEDIEICKTIGENLITLLKDGVGILTHCNAG FT QLATSKYGTATSPMYLAKEKGWNFKVYSDETRPRLQGSTLTALELYEAGIDVTTITDNM FT AAMVMSQGKIDAVIVGCDRIAANGDTANKIGTMGVSILAKYFGIPMYIAAPTPSIDINT FT KTGEDIPIEERNPEEVTSRFGVWTAPKGVKVYNPGFDVTPHENITAIVTEKGIVYPPFK FT ENLKKLFEK" FT misc_feature 1384889..1385809 FT /note="Pfam match to entry PF01008 IF-2B, Initiation factor FT 2 subunit family, score 368.3, E-value 8.2e-108" FT /inference="protein motif:Pfam:PF01008" FT CDS 1385866..1385976 FT /pseudo FT /transl_table=11 FT /locus_tag="CBO1269" FT /product="putative transporter (partial)" FT /note="Partial CDS. Similar to the N-terminal region of the FT mentioned database matches." FT /note="was marked partial" FT /db_xref="PSEUDO:CAL82819.1" FT CDS 1385993..1386640 FT /transl_table=11 FT /locus_tag="CBO1270" FT /product="putative aldolase" FT /db_xref="GOA:A5I1A8" FT /db_xref="InterPro:IPR001303" FT /db_xref="UniProtKB/TrEMBL:A5I1A8" FT /protein_id="CAL82820.1" FT /translation="MNNETYLRLQIVEVGKRLQQRFFVASNDGNISAKLDENTILITPT FT GVNKGEVTPDQIIKVDREGNVIEGHMKVTSEIKMHLAVYNMREDVKAIVHAHPPASTAF FT SVSKEKLDDPVILPEAVFSLGKIGYCEYGTPSTDEVPKAIEKEIPYSDVLLLSNHGALT FT VGTDVMQAYYRMENLEMVSKVTIYSKMIGNIKTLNELQVEKLNKVKEEKGWG" FT misc_feature 1386017..1386589 FT /note="Pfam match to entry PF00596 Aldolase_II, Class II FT Aldolase and Adducin N-terminal domain, score 149.9,E-value FT 4.6e-42" FT /inference="protein motif:Pfam:PF00596" FT CDS 1386814..1387608 FT /transl_table=11 FT /locus_tag="CBO1271" FT /product="DeoR-family transcriptional regulator" FT /db_xref="GOA:A5I1A9" FT /db_xref="InterPro:IPR001034" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014036" FT /db_xref="InterPro:IPR018356" FT /db_xref="UniProtKB/TrEMBL:A5I1A9" FT /protein_id="CAL82821.1" FT /translation="MKLKPEIRREKILAEIEKNKTVDIMELSEKLQVSEMTIRRDLKRL FT ESSEKLLRTYGGATRISEGECKKVIDDPLKGRVLKNKDEKAIIGKYAGELVENDDVIMI FT DASTTALAICKYIRDKKVTVVTNSISVVTALASFDNITVVVACGILRHSSLSLVGSYVE FT ESFKKFNIKKSFISAKALSFEAGLTDINAFEVETKKAAMSVSKEVIVLLDHSKLNNISL FT LKVCETKEISKIIIDGLKEFTVEEEELLNKFKSNGIEVIIAK" FT misc_feature 1386835..1386939 FT /note="PS00894 Bacterial regulatory proteins, deoR family FT signature." FT /inference="protein motif:ProSite:PS00894" FT misc_feature 1386835..1387524 FT /note="Pfam match to entry PF00455 deoR, Bacterial FT regulatory proteins, deoR family, score 217.1, E-value FT 2.8e-62" FT /inference="protein motif:Pfam:PF00455" FT misc_feature 1386877..1386942 FT /note="Predicted helix-turn-helix motif with score FT 1402.000, SD 3.96 at aa 22-43, sequence FT VDIMELSEKLQVSEMTIRRDLK" FT CDS 1387915..1388274 FT /transl_table=11 FT /locus_tag="CBO1273" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR010445" FT /db_xref="UniProtKB/TrEMBL:A5I1B0" FT /protein_id="CAL82822.1" FT /translation="MRNGFVFSLVMALIVAIFAIQNAVAIPIKILFWQINFSLAIIILF FT SAVIGAVITGITGIKKERGIKKQNKDLLNKIEELEKTNVDLLDRLEKLSSDSKDEHYIK FT DLEDKEIILDRENKK" FT sig_peptide 1387915..1387987 FT /locus_tag="CBO1273" FT /note="probabilty 1.000, with cleavage site probability FT 0.982 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1387927..1387995,1388023..1388091) FT /note="2 probable transmembrane helices predicted for FT CBO1273 by TMHMM2.0 at aa 5-27 and 37-59" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1388628..1389503) FT /transl_table=11 FT /locus_tag="CBO1274" FT /product="putative cation efflux protein" FT /db_xref="GOA:A5I1B1" FT /db_xref="InterPro:IPR002524" FT /db_xref="UniProtKB/TrEMBL:A5I1B1" FT /protein_id="CAL82823.1" FT /translation="MENEERLKIGNKVSNITIIVNIILSFIKVLFGIIGHSAATIADGI FT HSLSDVLSTIAVIIGLKISSKPADKDHPYGHEKLEAVTSKLLATMLFLTALFIGYSGIK FT VIINKDFSVPSKITIYVAILSIVTKEWMYRYTLKAAKKINSTALEADAWHHRSDSFSSI FT GTLIGIVGARLKYPILDPIASLVICIFIIKVSIDIYKNSINQLVDHCADEKTINMITEQ FT IKSIKEVERIDELKTRLHGSKLYVDVEIALDYSLSLKESHSIAEKVHDQIEASNNDIIH FT CMVHVNPYEE" FT misc_feature complement(1388631..1389464) FT /note="Pfam match to entry PF01545 Cation_efflux, Cation FT efflux family, score 306.5, E-value 3.3e-89" FT /inference="protein motif:Pfam:PF01545" FT misc_feature complement(order(1389180..1389248,1389399..1389467)) FT /note="2 probable transmembrane helices predicted for FT CBO1274 by TMHMM2.0 at aa 13-35 and 86-108" FT /inference="protein motif:TMHMM:2.0" FT CDS 1389751..1390479 FT /transl_table=11 FT /locus_tag="CBO1275" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR007353" FT /db_xref="InterPro:IPR023090" FT /db_xref="UniProtKB/TrEMBL:A5I1B2" FT /protein_id="CAL82824.1" FT /translation="MNEALVVLVRAIIGFFTLLIFARMLGRQQISQLTFFDYVLGITIG FT STASTLSTDLESTAWSHWIGLLTWCAIGFLLQWITLKWRYAAKYIEGEPTIVIMDGKIM FT EDTLRKMKYTVADVLEQLRGKDIFDLSKVDFAILESDGQLSVLKKPGEEPLTAKDLNIF FT KSKTGISRELIYDGEIVEDNLREINRDKEWLKAELKKRNIKDSSDVFLATINENNQIYI FT DTYKDHLKRIIDIGDYKGPY" FT misc_feature order(1389760..1389828,1389847..1389915,1389925..1389993) FT /note="3 probable transmembrane helices predicted for FT CBO1275 by TMHMM2.0 at aa 4-26, 33-55 and 59-81" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1390006..1390383 FT /note="Pfam match to entry PF04239 DUF421, Protein of FT unknown function (DUF421), score 203.7, E-value 3e-58" FT /inference="protein motif:Pfam:PF04239" FT CDS 1390641..1391006 FT /transl_table=11 FT /locus_tag="CBO1276" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I1B3" FT /protein_id="CAL82825.1" FT /translation="MRRFLVRTIPIVTLSFFLAVMLSASYMKKPRNQEENVDKFISSTI FT EYVKNEEWSNAEKEIEKLDLAWNKILKRVQFSSELDQINYLSESINKAKGGIIAEDKGI FT SLSNLISFYEEWKIIGK" FT misc_feature 1390650..1390718 FT /note="1 probable transmembrane helix predicted for CBO1276 FT by TMHMM2.0 at aa 4-26" FT /inference="protein motif:TMHMM:2.0" FT CDS 1391148..1391486 FT /transl_table=11 FT /locus_tag="CBO1277" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I1B4" FT /protein_id="CAL82826.1" FT /translation="MKGFLGNLVYSFMVSFGVIIGASAFSGIAAILLNHPPLKIMSDLS FT NSIKIWAVATALGGTFSSFSILEEGIFRGELRGMLKQIFYILASLIGANLAVNSIELLQ FT KWGEYFNR" FT sig_peptide 1391148..1391217 FT /locus_tag="CBO1277" FT /note="probabilty 0.931, with cleavage site probability FT 0.457 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1391184..1391252,1391295..1391363,1391397..1391456) FT /note="3 probable transmembrane helices predicted for FT CBO1277 by TMHMM2.0 at aa 13-35, 50-72 and 84-103" FT /inference="protein motif:TMHMM:2.0" FT CDS 1391483..1391956 FT /transl_table=11 FT /locus_tag="CBO1278" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I1B5" FT /protein_id="CAL82827.1" FT /translation="MNKENKYFFSFCVGLVIGGTVGIIFFSLFISYRIENYHRKITYLN FT NIIEDQQVRLEGLENKLSKKKLIVKKIEVDIKFKNKEIEDELVAIELEKHIKEKFNNLI FT GKELDNLDGDILVQVVDNRIMKIKNKQYKVKVEKIIIAQNIKFCIQVEKVQSD" FT CDS 1392339..1392704 FT /transl_table=11 FT /locus_tag="CBO1279" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR021683" FT /db_xref="UniProtKB/TrEMBL:A5I1B6" FT /protein_id="CAL82828.1" FT /translation="MLVVFISFIIIMPVHEILHSLAFPNFKQTIFGFIPKGLVSYSFFK FT GQISRKGLIIFLIFPFIILTILPTIGLSFIRIKNNFVYVIIIINTVASYVDILTISVLL FT LQVPKSTCIKNIGNKTY" FT misc_feature order(1392342..1392410,1392495..1392563,1392582..1392650) FT /note="3 probable transmembrane helices predicted for FT CBO1279 by TMHMM2.0 at aa 2-24, 53-75 and 82-104" FT /inference="protein motif:TMHMM:2.0" FT CDS 1392788..1393480 FT /transl_table=11 FT /locus_tag="CBO1280" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR014957" FT /db_xref="UniProtKB/TrEMBL:A5I1B7" FT /protein_id="CAL82829.1" FT /translation="MEIFEDELNKLTYCTEVTTAKSLNKFTDKIKVFYYKYITGESYFD FT FYFGRTYKGKLIENKFYMFKEDLRLYIHFLKNFYNVLRITVNKQSDIIHYFFIKDQGEI FT CISLIGEDYVKLASEDNSKARVFFLLNKDELSYYITVMENIYYERNVINGLDYLKNSLD FT EANGKGYNKENNKNLEKEVNRDYVLSQREKNNVYLQALYALVDEALDRKDKKTFYSICD FT QMKKYNKK" FT CDS complement(1393551..1393721) FT /transl_table=11 FT /locus_tag="CBO1281" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1B8" FT /protein_id="CAL82830.1" FT /translation="MAKKHKKKTLFRILLSTLAIGSIFLASNSKENCCKDKDNDEHKES FT SMDNEYDQCNA" FT sig_peptide complement(1393631..1393721) FT /locus_tag="CBO1281" FT /note="probabilty 1.000, with cleavage site probability FT 0.691 between residues 29 and 30" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1394102..1394335) FT /transl_table=11 FT /locus_tag="CBO1281A" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1B9" FT /protein_id="CAL82831.1" FT /translation="MNNNKYFTENMNAVSTKVGNYTKQNMGQNNQQAGSQHTAASQATS FT TNAPQATSTAASQTTTSTRTSAAYSNQNTKKS" FT CDS 1395523..1395819 FT /transl_table=11 FT /locus_tag="CBO1283" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1C0" FT /protein_id="CAL82832.1" FT /translation="MSGLIKFGTIINIIGGVLVLYSFLPQIYTILKTESPGNNSIQYWI FT VMTFGISCICINQFICEVPKVQLIIQSINVVFAILTTVLIIYFSVKEKKHKEI" FT misc_feature order(1395541..1395609,1395637..1395705,1395724..1395792) FT /note="3 probable transmembrane helices predicted for FT CBO1283 by TMHMM2.0 at aa 7-29, 39-61 and 68-90" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1395712..1395759 FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT /inference="protein motif:ProSite:PS00038" FT CDS 1395838..1396143 FT /transl_table=11 FT /locus_tag="CBO1284" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR006603" FT /db_xref="UniProtKB/TrEMBL:A5I1C1" FT /protein_id="CAL82833.1" FT /translation="MLIMTDLHFWGNIAQALGSFTLIYSFFPQIYKLLKLKSAEGISLQ FT YWAILTIGVACIAINLTISKVNIFIQLTQWLNVALALIVLLISSKYKREVKEKKES" FT misc_feature order(1395865..1395921,1395958..1396026,1396036..1396104) FT /note="3 probable transmembrane helices predicted for FT CBO1284 by TMHMM2.0 at aa 10-28, 41-63 and 67-89" FT /inference="protein motif:TMHMM:2.0" FT CDS 1396200..1398497 FT /transl_table=11 FT /gene="xdhA2" FT /locus_tag="CBO1285" FT /product="xanthine dehydrogenase, molybdenum binding FT subunit" FT /EC_number="1.17.1.4" FT /db_xref="GOA:A5I1C2" FT /db_xref="InterPro:IPR000674" FT /db_xref="InterPro:IPR008274" FT /db_xref="UniProtKB/TrEMBL:A5I1C2" FT /protein_id="CAL82834.1" FT /translation="MEDSYDLIGKSINRVDAVAKVTGRAKYCSDHFEANSLVGMVLRSP FT YAHAKVKNIDTKEAESLDGVEAVLTYKNVPNTKFPTAGHPYSLDPSHRDIEDYVLLTDK FT ARFVGDAVAAVIATDELIAKKALKLIKVEYEVLPFVIDQEEAIKEGAPVIHDERPNNIV FT SDFGITVGDPDEVFKNADKIYKGQYETQIVQHCQMETHNAMAKLDEKGRMLIITSTQIP FT HIVRRIVSKACNLPIGKIRVIKPYVGGGFGGKQDVIIEPLTAIMSLAVNGRCVRLQLSR FT EEAIVATRTRHAMRVNIKIALSKDNKIEGYDIENFVNNGAYASHGHSIAMSAGSKIRPL FT YDIKAEKYRPKTIYTNLPVAGAMRAYGIPQMCFVIESMIDDICNDLNIDPVDFRLNSFI FT KKGHIDKESDLVVRTFGLPECLKRGRKLIDWEGKRELYKNQNGPIRKGVGMACFSYFSG FT TWPVSLEAAGTRIVMNQDGSVQVQVGATEIGQGSDTVFSQMAAETIGIPFDMVTIVSQQ FT DTDITPFDTGSYASRQSFIAGQAIKKAATEVKRKALKIASDKCGLDAELLDIVDAKVIE FT KGLRRELYTLEEIAMEAYYNREKYAPITSDLTVKVKNNAIAYGATFVEVEVDIRTGKIK FT VLDIYNIHDSGKILNKKLAEGQVHGGVSMALGFALSEKFIIDEKTGSIINNNLLHYKLP FT TIMDTPNIKCEFVNTYDPTSSYGQKSLGENTTISPAPAIRNAVLNATGVAFNKLPMDAQ FT SVFEKFKEVGLI" FT misc_feature 1396263..1396619 FT /note="Pfam match to entry PF01315 Ald_Xan_dh_C, Aldehyde FT oxidase and xanthine dehydrogenase, a/b hammerhead FT domain,score 150.8, E-value 2.5e-42" FT /inference="protein motif:Pfam:PF01315" FT misc_feature 1396422..1396454 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature 1396620..1398299 FT /note="Pfam match to entry PF02738 Ald_Xan_dh_C2, Aldehyde FT oxidase and xanthine dehydrogenase, molybdopterin binding FT domain, score 582.2, E-value 3.3e-172" FT /inference="protein motif:Pfam:PF02738" FT CDS 1398511..1399395 FT /transl_table=11 FT /gene="xdhB2" FT /locus_tag="CBO1286" FT /product="xanthine dehydrogenase, FAD-binding subunit" FT /EC_number="1.17.1.4" FT /db_xref="GOA:A5I1C3" FT /db_xref="InterPro:IPR002346" FT /db_xref="InterPro:IPR005107" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR016169" FT /db_xref="UniProtKB/TrEMBL:A5I1C3" FT /protein_id="CAL82835.1" FT /translation="MYDINEILEPKTLEKALELLSEHDNLTVIAGGTDVLVKLHEERFN FT SLNLISIRNIESLNEIKVIENGSIEIGAMATFSEIFRDDIVNKNIPILAEAAVSMGGPQ FT IRNMATIGGNICNGAVSGDSAPSLFALNSKLRLKSKNGERIVKIKDFYIGPGQVGIRKD FT EILISIIIEKKDYENKYGNYIKFASRNAMDIALMGVAVLVEVKNKKFEDLRIALGVSGP FT TPIRCEIAEAEGKYMKVTDENIRLIGNLALKSSKAIDFWNASKEFKEHLIQELTYRGLK FT ESAKRAESLENIK" FT misc_feature 1398517..1399032 FT /note="Pfam match to entry PF00941 FAD_binding_5, FAD FT binding domain in molybdopterin dehydrogenase, score 121.6, FT E-value 1.5e-33" FT /inference="protein motif:Pfam:PF00941" FT misc_feature 1399051..1399374 FT /note="Pfam match to entry PF03450 CO_deh_flav_C, CO FT dehydrogenase flavoprotein C-terminal domain, score FT 15.8,E-value 7.1e-05" FT /inference="protein motif:Pfam:PF03450" FT CDS 1399427..1399900 FT /transl_table=11 FT /gene="xdhC2" FT /locus_tag="CBO1287" FT /product="xanthine dehydrogenase iron-sulfur binding FT subunit" FT /db_xref="GOA:A5I1C4" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR002888" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR012675" FT /db_xref="UniProtKB/TrEMBL:A5I1C4" FT /protein_id="CAL82836.1" FT /translation="MSLKRKIKLTVNDKKYEIEIDIRESLSEVLRSRLHLTGVKQGCLV FT GECGACTVLIDGVPTDSCIYLAAWADGKTIKTIEGVQKNGELSEVQKAFIDEGAVQCGF FT CTPGLVLTTTALVESEKNYTDDEIKREISGHLCRCTGYNKIFNATKKAILKRK" FT misc_feature 1399451..1399633 FT /note="Pfam match to entry PF00111 fer2, 2Fe-2S iron-sulfur FT cluster binding domain, score 25.8, E-value 0.0001" FT /inference="protein motif:Pfam:PF00111" FT misc_feature 1399553..1399579 FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00197" FT misc_feature 1399625..1399648 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1399655..1399879 FT /note="Pfam match to entry PF01799 fer2_2, [2Fe-2S] binding FT domain, score 115.0, E-value 1.5e-31" FT /inference="protein motif:Pfam:PF01799" FT CDS 1400016..1400489 FT /transl_table=11 FT /gene="guaD" FT /locus_tag="CBO1288" FT /product="guanine deaminase" FT /EC_number="3.5.4.3" FT /db_xref="GOA:A5I1C5" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="UniProtKB/TrEMBL:A5I1C5" FT /protein_id="CAL82837.1" FT /translation="MDKNEIMDLCVKSCMEGMKNHEGGPFGSAIVKDGEVIAVAHNTVI FT GDNDPTAHGEVNVIRKACKKLNTFDLSGCELYTTSEPCPMCMSAIIWANISKVYYGCTV FT EDARDIGFRDEHILKFLKEGCKDKVILDLEAVDKKSSLKAFEYWNKDRDKTEY" FT misc_feature 1400016..1400321 FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT 115.6, E-value 1e-31" FT /inference="protein motif:Pfam:PF00383" FT misc_feature 1400172..1400285 FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT /inference="protein motif:ProSite:PS00903" FT misc_feature 1400202..1400222 FT /note="PS00127 Pancreatic ribonuclease family signature." FT /inference="protein motif:ProSite:PS00127" FT CDS 1400879..1403074 FT /transl_table=11 FT /locus_tag="CBO1289" FT /product="putative DNA topoisomerase" FT /db_xref="GOA:A5I1C6" FT /db_xref="InterPro:IPR000380" FT /db_xref="InterPro:IPR003601" FT /db_xref="InterPro:IPR003602" FT /db_xref="InterPro:IPR005738" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR013497" FT /db_xref="InterPro:IPR013824" FT /db_xref="InterPro:IPR013825" FT /db_xref="InterPro:IPR023405" FT /db_xref="InterPro:IPR023406" FT /db_xref="UniProtKB/TrEMBL:A5I1C6" FT /protein_id="CAL82838.1" FT /translation="MGKVLVLAEKPSVGRDLAKVLKCNKKGNGYLEGNKYIVTWALGHL FT ITLSDPESYDEKYKKWSMDTLPMLPKRMKTTVIKKTSKHFSEVRKVMIRKDVEELVIAT FT DAGREGELVARWIIDKVGFKKPIKRLWISSQTDKAILDGFRNLKPGKNYENLYHSAVCR FT SEADWIVGLNVTRALTCRYNAQLSAGRVQTPTLAMIVQREEEIKNFKPRDYYSIEGKTK FT GFTMHWESAKGRFNTFDEDLAKKVVSKVTGKEGKIIEVTESDKKKYAPALYDLTELQRD FT ANRIFGYSAKQTLSIMQRLYENHKILTYPRTDSRYISKDVVGTLKDRLKAISISNYSKF FT TNEILKGNIKAHKGFVDDSKVSDHHAIIPTEEKPKLGNLSGEERNIYDLVIKRFLSVML FT PPFEYIQTTIKSEVIGEKFVARGKVIKSKGWKAVYDREEFDDKNNNSDSDDIKDQTLPK FT VNKGDGIKFSNFKINKGQTKPPARFNEGTLLSAMENPQRYINLDKESSKTLGETGGLGT FT VATRADIIEKLYNTFYIEKRGKEIVPTSKGKQVIDLVPKDLKSPLLTAKWERELDSISK FT GNLRGQIFINKMRDYSTKLVEDVKNSKDKYVHDNLTGKKCPQCGKYMLEVKGKNGVINV FT CQDRECGYRENVSRFTNVRCPECHVKLELRGEGQGQIYVCTRCSFREKLSSFNKKYRNN FT QEKLNKRDVTKYMKKMQKENDEPINSALAEALSKLKL" FT misc_feature 1400885..1401277 FT /note="Pfam match to entry PF01751 Toprim, Toprim FT domain,score 75.8, E-value 9.2e-20" FT /inference="protein motif:Pfam:PF01751" FT misc_feature 1401323..1402549 FT /note="Pfam match to entry PF01131 Topoisom_bac, DNA FT topoisomerase, score 468.9, E-value 4.3e-138" FT /inference="protein motif:Pfam:PF01131" FT misc_feature 1401770..1401817 FT /note="PS00396 Prokaryotic DNA topoisomerase I active FT site." FT /inference="protein motif:ProSite:PS00396" FT CDS 1403386..1403991 FT /transl_table=11 FT /locus_tag="CBO1290" FT /product="putative membrane protein" FT /db_xref="GOA:A5I1C7" FT /db_xref="InterPro:IPR003810" FT /db_xref="InterPro:IPR022929" FT /db_xref="UniProtKB/Swiss-Prot:A5I1C7" FT /protein_id="CAL82839.1" FT /translation="MDLISVILISIGLSMDAFAVSITNGAMISKVTASEGIRIGLFFGG FT FQALMPLIGWSIGIKFESYIAALDHWIALILLSIIGGKMIYDSVKENQDHKDEIACDYA FT AGEKKCLNNKTLILLAIATSIDALAVGVSFAFLKVSIINTIIIIGSITFVICFIGVMIG FT KKCGKLLKKRAEILGGVVLILIGVKIFIQHTNILSYIF" FT sig_peptide 1403386..1403482 FT /locus_tag="CBO1290" FT /note="probabilty 0.648, with cleavage site probability FT 0.522 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1403395..1403463,1403500..1403562,1403575..1403643, FT 1403728..1403796,1403806..1403874,1403911..1403979) FT /note="6 probable transmembrane helices predicted for FT CBO1290 by TMHMM2.0 at aa 4-26, 39-59, 64-86, FT 115-137,141-163 and 176-198" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1403401..1403631 FT /note="Pfam match to entry PF02659 DUF204, Domain of FT unknown function DUF, score 62.1, E-value 1.3e-15" FT /inference="protein motif:Pfam:PF02659" FT misc_feature 1403731..1403946 FT /note="Pfam match to entry PF02659 DUF204, Domain of FT unknown function DUF, score 93.4, E-value 4.7e-25" FT /inference="protein motif:Pfam:PF02659" FT CDS 1404057..1404293 FT /transl_table=11 FT /locus_tag="CBO1291" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR018680" FT /db_xref="UniProtKB/TrEMBL:A5I1C8" FT /protein_id="CAL82840.1" FT /translation="MKKKNVIVVDKQKKKVMIDSIKEYFYNEREEELGDLAAGMILDFF FT LEELAPEIYNKGVYDAYEYSLERIEDVLSIQKY" FT repeat_region 1404355..1404410 FT repeat_region complement(1404366..1404405) FT repeat_region 1404416..1404463 FT repeat_region 1404489..1404616 FT /note="intergenic repeat 2" FT CDS 1405020..1405673 FT /transl_table=11 FT /gene="tal" FT /locus_tag="CBO1292" FT /product="putative transaldolase" FT /EC_number="2.2.1.2" FT /db_xref="GOA:A5I1C9" FT /db_xref="InterPro:IPR001585" FT /db_xref="InterPro:IPR004731" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR018225" FT /db_xref="InterPro:IPR022999" FT /db_xref="UniProtKB/Swiss-Prot:A5I1C9" FT /protein_id="CAL82841.1" FT /translation="MKIFIDTANVEEIRKASELGVLSGVTTNPSLIAKEGRDLKEVVEE FT ICNIVDGPISAEVISLEYEKMIEEGRELSKLHKNIVIKIPMCEEGLKAVSVLSKEGIKT FT NVTLIFSSMQALLAARAGATYVSPFLGRLDDIGNPGIEVVEQIADMFKIHEIKTEIIAA FT SVRTPMHVLEAAMAGSHIATIPYKVIIQMSKHALTDIGIEKFMKDYEKAFGENK" FT misc_feature 1405023..1405667 FT /note="Pfam match to entry PF00923 FT Transaldolase,Transaldolase, score 274.7, E-value 1.2e-79" FT /inference="protein motif:Pfam:PF00923" FT misc_feature 1405089..1405115 FT /note="PS01054 Transaldolase signature 1." FT /inference="protein motif:ProSite:PS01054" FT CDS 1406072..1407736 FT /transl_table=11 FT /locus_tag="CBO1293" FT /product="metallo-beta-lactamase superfamily protein" FT /db_xref="GOA:A5I1D0" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR004613" FT /db_xref="InterPro:IPR011108" FT /db_xref="UniProtKB/TrEMBL:A5I1D0" FT /protein_id="CAL82842.1" FT /translation="MSNKDSVKVIPLGGLGEIGKNITAFEYGNEIVIIDCGISFPDEEM FT YGVDLVIPDITYLLNNKDKVKAIFLTHGHEDHIGSLPYILQQLNRPVYGTALTLGIVEN FT KLKEHNMLSDCELNKVEAGDIVELKNLKIEFIRNTHSIADSCSIAIHTPVGVILHTGDF FT KIDYTPIDGLVMDFHRIAELGKKGVLLLMADSTNVQRKGHTISEKSIGETLTKIFSNAK FT GRVIVATFASNIHRMQQIIDASIEYGRKVAFSGRSMENISKVAMDLGYLHIPETYLITV FT DEMKNYPNEQITIITTGSQGEPMAALARIAYSNHRKIAIEPKDLFIISASPIPGNEKLI FT SRVINELFKKGADVIYEALEEVHVSGHAYEEELKLIHTLVHPKYFMPVHGEYRHLKRHV FT DLAMELGMERENIFSLETGQVLEISHEEAKVSGKVRTGSIFVDGIGVGDVGNIVLRDRR FT YLAQDGMLTIVVTLEKESYSVIAGPDIITRGFIYVKESEDLINEVKGIVKKELENCLEN FT KIIEWYVLKSNIKKSVEKYLYEKTKRRPIVLPIIMEI" FT misc_feature 1406126..1406761 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 94.9, FT E-value 1.7e-25" FT /inference="protein motif:Pfam:PF00753" FT CDS 1408041..1409393 FT /transl_table=11 FT /locus_tag="CBO1294" FT /product="putative sodium/alanine symporter" FT /db_xref="GOA:A5I1D1" FT /db_xref="InterPro:IPR001463" FT /db_xref="UniProtKB/TrEMBL:A5I1D1" FT /protein_id="CAL82843.1" FT /translation="MDLLNAVKGINNVLWNYILIFLLCGTGIVFTVSLKFIQVSKFKES FT FKKAFGGISLRGKKAGKDGMSSFQSLATAVAAQVGTGNLAGAATAIVSGGPGAIFWMWI FT SAFLGMATIFGEAVLAQIFKEKVNGEVTGGPAYYISKGLKSKFLASFFSVTIILALGFI FT GNMVQANSIGAAFSNISNIPSWIIGIMIAILGLVVFVGGIGRIASVTEKMVPIMAAFYI FT IGSIIILAKNYTNILPAFKLIFVSAFNPKAAVGGVAGVTVKQAIRYGVARGLFSNEAGM FT GSTPHAHAVAKVKHPVEQGLVAIVGVFIDTFIVLTFTAFVILTTGVLDGKTTGIELTQN FT AFTQGLGNFGAYFIAIALFFFAFSTIIGWYFFGEANVKYLFKGKGLNIYRLLVAIFIVI FT GTTLKVDLVWELADTFNGLMVIPNVIALVALSKIVKDSLKDYNENFKVTDK" FT misc_feature order(1408083..1408151,1408248..1408316,1408329..1408397, FT 1408479..1408547,1408590..1408658,1408677..1408730, FT 1408758..1408826,1408941..1409009,1409091..1409159, FT 1409196..1409255,1409283..1409342) FT /note="12 probable transmembrane helices predicted for FT CBO1294 by TMHMM2.0 at aa 2-19, 34-56, 89-111, FT 116-138,166-188, 203-225, 232-249, 259-281, 320-342, FT 370-392,405-424 and 434-453" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1408176..1409390 FT /note="Pfam match to entry PF01235 FT Na_Ala_symp,Sodium:alanine symporter family, score 540.5, FT E-value 1.2e-159" FT /inference="protein motif:Pfam:PF01235" FT misc_feature 1408320..1408367 FT /note="PS00873 Sodium:alanine symporter family signature." FT /inference="protein motif:ProSite:PS00873" FT CDS 1409708..1410553 FT /transl_table=11 FT /locus_tag="CBO1295" FT /product="putative signaling protein" FT /db_xref="GOA:A5I1D2" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="UniProtKB/TrEMBL:A5I1D2" FT /protein_id="CAL82844.1" FT /translation="MDRFSKNIDICIILLLLNFFCICSFIYFNLGKNIMLNFIMLGSLF FT MVTIVAYFRGIVEGFLFSAMIIFFYGTFIIYNNTIHRNPVELITYIWMVDIPLGAFISG FT KLSENINLIQSINTRLQKEYRDLITIDKTTGLSNLKGFYIDLDREMSKAKRHELNLSLM FT IVKIQYYDELNAILGEKKMEEILKIISNVITLAIRGEDISYKLNKNTLAILMPSTNLQG FT AEVVKNRIKESISEKNLKIKQEDKNVNIDIKVGIVEYKNTIKEAFEFKELAEKELEYDV FT " FT misc_feature order(1409735..1409794,1409807..1409875,1409888..1409947) FT /note="3 probable transmembrane helices predicted for FT CBO1295 by TMHMM2.0 at aa 10-29, 34-56 and 61-80" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1410077..1410493 FT /note="Pfam match to entry PF00990 GGDEF, GGDEF FT domain,score 0.3, E-value 4.1e-08" FT /inference="protein motif:Pfam:PF00990" FT CDS 1410546..1412198 FT /transl_table=11 FT /locus_tag="CBO1296" FT /product="putative cell wall anchored protein" FT /db_xref="GOA:A5I1D3" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR018763" FT /db_xref="UniProtKB/TrEMBL:A5I1D3" FT /protein_id="CAL82845.1" FT /translation="MYKKITIYFMIFFLLFTNANCKVKAADSDKKEKVLIVYDSLNFFS FT YNNNIVYSVRELLGAFNTAVKVVNIADYKEGEISNYDYVFVMGIERELNKKTFIKDLKN FT YNKKICWIGEGIDILLQNNPKYSMRYVDSKSDITEAYYSNKENINISKMEKFYLDSKES FT FTVLKPYSKETKIYAYLSNGKDYFPYIINEKNLWHISRINNNSVIFYIFSDILNYIFEV FT DKFKEEKVFIRIEDVHPLIDINKLKAIADYLYSEDIPFMIALIPTFVDTKTGYVNSMSD FT QRKFINNIKYMQQKGGTVILHGYTHPNNKEEASEEEHEFWNGKENALLEMDMGKYVYDK FT VGKGIKECVKNNIYPLGFEAPNYAMDMRTYKEFKKYFSTCVGQCQSSDKRFTSAAYPYV FT LKDTETFNILIPENLGYIEKENPLWLKKIQENFRQISMVRGYTAGVFFHSYIDINYLKE FT LVDYLKSQNVDFLDLKKEENWVKWNDIKILSRDGKVNIYHKESQESSKQGFKEKRFVER FT ANFIVIMMVIVFVTIFIIMFFVSKKKDKNKFLR" FT sig_peptide 1410546..1410618 FT /locus_tag="CBO1296" FT /note="probabilty 0.968, with cleavage site probability FT 0.964 between residues 25 and 26" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1412097..1412165 FT /note="1 probable transmembrane helix predicted for CBO1296 FT by TMHMM2.0 at aa 518-540" FT /inference="protein motif:TMHMM:2.0" FT CDS 1412204..1413466 FT /transl_table=11 FT /locus_tag="CBO1297" FT /product="putative membrane-associated glycosyl FT transferase" FT /db_xref="GOA:A5I1D4" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:A5I1D4" FT /protein_id="CAL82846.1" FT /translation="MESLNWVDYLFIFSLVSIWMLLFVNIILSLAGYRYYLKTLNSELK FT GLENEKYPKVSILVPAHNEEKVIGRTVKSILLLNYPKDKMELIVINDNSSDNTKEILKQ FT IQKEYRSYNFKIINTDNITGGRGKSNALNIGYKHSSGDFIAVYDADNTPDKNALKYLMK FT TIIEDEGLGAVIGKFRTRNKDRNMLTRFINIETLSFQWMCQAGRWKLLNLCTIPGTNFV FT VRKNIIQELNGWDPKAIAEDTEISFRIYELGYKIKFVPYSVTWEQEPENLKVWFKQRTR FT WAKGNIYVLLKYFKNMFKGTSKDIIFDIFYFFSVYFLFLSSVIISDILFIVGIFLNINL FT HVTGNFNVLWILAYVLFVLEVSLTLTLEKGESNKENLILVPIMYFTYCQMWMIVALRGI FT IQYILDKLFKKEIKWYKTERF" FT misc_feature order(1412231..1412299,1413128..1413196,1413239..1413298, FT 1413335..1413403) FT /note="4 probable transmembrane helices predicted for FT CBO1297 by TMHMM2.0 at aa 10-32, 309-331, 346-365 and FT 378-400" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1412369..1412899 FT /note="Pfam match to entry PF00535 Glycos_transf_2,Glycosyl FT transferase, score 117.7, E-value 2.3e-32" FT /inference="protein motif:Pfam:PF00535" FT misc_feature 1413053..1413076 FT /note="PS00030 Eukaryotic putative RNA-binding region RNP-1 FT signature." FT /inference="protein motif:ProSite:PS00030" FT CDS 1413747..1415843 FT /transl_table=11 FT /locus_tag="CBO1298" FT /product="putative cell wall anchored protein" FT /db_xref="GOA:A5I1D5" FT /db_xref="InterPro:IPR018513" FT /db_xref="UniProtKB/TrEMBL:A5I1D5" FT /protein_id="CAL82847.1" FT /translation="MKKNLRIIIIIIMLFLGNIISGQNVVAAPNKSKNFRVEKDMKMEG FT VFGSNVFFFNIDKSWTVDNAYLNLIFTESDLLDKTQSTLTAYINDFPVYSMKIGDKKKY FT KESIKINIPKDKLISGYNEVKIKVYSRISEKPCIDDVNSGNWFIIHKGSYVHMDFKDRE FT DTKTLKEFPFPYLKASDENPANSMIMLPDNFSQGEITSAMMLCSNFGSKRKSDNVNMKV FT YKASEANLKNKLDIIFIGSKNNTPLDLLTLLSKEEINRLDKDAIVKEVISPYNPSKKLL FT LLISNNEKNMIKASKLLCSKDYMKQIDKDTIIVNNSMDVEDIKEEKANRVSLSDLGYGN FT VSLKGPFKQEATFNLNIPKDRFIKEGSKVVINNRYSKNIDFDRSLITVYINDIPIGSKK FT LDSKTADSNSFEISIPKDIRNSSNYEIKVVFNLEIKDLFCTFREGENPWAYILNNSYIY FT TPYKEGRDNVFENYPNPFISNGGMNDLTLVLSDNTTSEELNFAGNIMATIGHDVDTNRG FT KFNAVAAKDLSSKLKKGNLIIIGTPESNSIIKNSNKNLYIKFNKNFNGFLSNEKMKFFQ FT DYSSKLASIQLIDSPYNKENKAMIVTSTYTRDLALAQKYLSDISLVKSLKGNAVTIDRD FT GVMNYSYFGDKYDKEKEENSNISKFKNITLNSNIKNLLIFFVFIMVILVGGSLLFIKKY FT KKNS" FT sig_peptide 1413747..1413825 FT /locus_tag="CBO1298" FT /note="probabilty 1.000, with cleavage site probability FT 0.882 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1413765..1413833,1415760..1415819) FT /note="2 probable transmembrane helices predicted for FT CBO1298 by TMHMM2.0 at aa 7-29 and 672-691" FT /inference="protein motif:TMHMM:2.0" FT repeat_region complement(1415881..1416090) FT /note="intergenic repeat 1" FT CDS 1416260..1417354 FT /transl_table=11 FT /locus_tag="CBO1300" FT /product="putative exported protein" FT /db_xref="GOA:A5I1D6" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:A5I1D6" FT /protein_id="CAL82848.1" FT /translation="MKKNKFIIWLSIILIFIYVLNLNPIVHGEINKIKNGFYRKTLNDK FT FEVKIKSGNLSTDYDINQALKDINKLGLNTVNIPVVINIKNLSSNDMSVDRESEKKAIE FT LIKRLRWKKINIILEPYPWIDNGNLYETEWNPNNKKQFFENWQNNVLKVLIDNIAVPYH FT VDALNVASNFVYIENEEEHWCNTIDFVRKYYKGLVTYRTCWWYTAYWEPKTKEKYQEKL FT NNKLFSKVDFISVAAYFELTDKDTNTVEELVKAIDNVKKNDRRQNIKEELYHFNEKWHK FT PIFFGELGFPRKSKAASEPWNPIPSKNSNNEEQARCFEAYRKVFEKEPWLLGFSIFAIG FT DNSFDKNYYPSEETTKVIKKWYSK" FT sig_peptide 1416260..1416341 FT /locus_tag="CBO1300" FT /note="probabilty 0.965, with cleavage site probability FT 0.956 between residues 28 and 29" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1416278..1416337 FT /note="1 probable transmembrane helix predicted for CBO1300 FT by TMHMM2.0 at aa 7-26" FT /inference="protein motif:TMHMM:2.0" FT CDS 1417582..1417746 FT /transl_table=11 FT /locus_tag="CBO1301" FT /product="conserved hypothetical protein" FT /note="Highly similar to CBO2803 (89.0 38d) and CBO3279 FT (89.2 38d)" FT /db_xref="UniProtKB/TrEMBL:A5I1D7" FT /protein_id="CAL82849.1" FT /translation="MADKNITCKDCGKEFVFTEGEQEFYKEKGFENEPQRCPECRKARK FT QQNNRGFRR" FT repeat_region 1417582..1417697 FT CDS 1418081..1418884 FT /transl_table=11 FT /locus_tag="CBO1302" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR021260" FT /db_xref="UniProtKB/TrEMBL:A5I1D8" FT /protein_id="CAL82850.1" FT /translation="MSTQIIIVLILTFVIYVISTLAYSVRIVGVRTGRIAISFAVFNVF FT ALLSRTANTIQAPLLAKTIENSINLGNSEGLLYVFRWILLSTTLATVAGALMLPTFIKV FT FGKAVESFSIYRSIPKLLFHGFSKSGVRQFKESVTRPRKQNFKYIKEYKKIPKKLVLLN FT TIAFSISTVGILASLYAGCLNPELRTTCSTLSSVINGIATILMFIFIDPFISMLTDDVI FT EGSCSEVHFNRCITFIVGGLIVGTLLAQILLKPAAQIISTIARLI" FT misc_feature order(1418093..1418161,1418195..1418263,1418306..1418374, FT 1418555..1418623,1418666..1418734,1418771..1418839) FT /note="6 probable transmembrane helices predicted for FT CBO1302 by TMHMM2.0 at aa 5-27, 39-61, 76-98, FT 159-181,196-218 and 231-253" FT /inference="protein motif:TMHMM:2.0" FT CDS 1419160..1419426 FT /transl_table=11 FT /locus_tag="CBO1303" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003735" FT /db_xref="UniProtKB/TrEMBL:A5I1D9" FT /protein_id="CAL82851.1" FT /translation="MNEEKKAALQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSL FT LKKANMLILKQHLNHCVKQAFLHDNGEEKVDEIIDTLTKLLGK" FT misc_feature 1419232..1419417 FT /note="Pfam match to entry PF02583 DUF156, Uncharacterised FT BCR, COG1937, score 62.8, E-value 7.6e-16" FT /inference="protein motif:Pfam:PF02583" FT CDS 1419463..1421898 FT /transl_table=11 FT /locus_tag="CBO1304" FT /product="putative heavy-meta-transporting P-type ATPase" FT /db_xref="GOA:A5I1E0" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006121" FT /db_xref="InterPro:IPR006122" FT /db_xref="InterPro:IPR006403" FT /db_xref="InterPro:IPR006416" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR023300" FT /db_xref="UniProtKB/TrEMBL:A5I1E0" FT /protein_id="CAL82852.1" FT /translation="MKKLSFNIEGMTCAACAKAVERVSKKLEGVQEANVNIATEKLSII FT FDEKKCNTLDIEKAIEKAGYKAFLDGQHMNLKIEGMTCAACAKAVERVSRKLEGVIEAN FT VNIATEKLDITFDKSKVSINDIKRAIEKAGYKALEEKNIEEEKKGKEDAIKSLWRRFIT FT SLIFAVPLLTISMGSMMGLKLPKIIDPMHSPLNFGLIQLILVIPIILVGNKFFRVGFKS FT LVKGSPNMDSLISIGTSAAVVYGIFAIFQISKGNMHYAHDLYFESGATILTLITLGKYL FT ESVSKGKTSEAIKKLMALAPKNATIIRDNKEIIIPIEEVKINDIVLVKPGEKLPVDGEI FT IEGSTAIDESMLTGESLPVEKHIGDIAVAGSINKHGLIKYKATKVGKDTTLAQIIKLVE FT EAQGSKAPIARLADKISAYFVPTVIALAIISSLAWYVSGKSLIFSLTIFISVLVIACPC FT ALGLATPTAIMVGTGKGAENGVLIKSGGALETAHKVQSIIFDKTGTITEGKPKVTDILV FT SEGVDEKYLLQVAATAEKGSEHPLGEAIVKKAEEENLELFQGKNFRAIPGKGIEVIIGD FT KKVLLGNLRLMEEYEVEIKDFMDKSHKLSKEGKTPMFIAIENKIKGIIAVADTLKENSK FT KAIEKLHDMGVEVVMITGDNKNTAEAIGKQVGIDKIFAEVLPSDKANWVKKLQQEGKIV FT AMVGDGINDAPALAQADIGIAIGSGTDVAIESADIVLIKSDLMDVPTALKLSRATIKNI FT KENLFWAFGYNTLGIPVAMGVLYIFGGPLLNPMIAAAAMSFSSVSVLLNALRLRRFKS" FT misc_feature 1419475..1419669 FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 79.3, E-value FT 8.1e-21" FT /inference="protein motif:Pfam:PF00403" FT misc_feature 1419685..1419879 FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 70.7, E-value FT 3.2e-18" FT /inference="protein motif:Pfam:PF00403" FT misc_feature order(1419940..1420008,1420051..1420119,1420156..1420221, FT 1420249..1420317,1420705..1420773,1420783..1420851, FT 1421728..1421796,1421806..1421874) FT /note="8 probable transmembrane helices predicted for FT CBO1304 by TMHMM2.0 at aa 160-182, 197-219, FT 232-253,263-285, 415-437, 441-463, 756-778 and 782-804" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1420270..1420932 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 358.4, E-value 8.2e-105" FT /inference="protein motif:Pfam:PF00122" FT misc_feature 1420759..1420782 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1420942..1421622 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 141.8, E-value 1.3e-39" FT /inference="protein motif:Pfam:PF00702" FT misc_feature 1420960..1420980 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT /inference="protein motif:ProSite:PS00154" FT CDS 1422021..1422236 FT /transl_table=11 FT /locus_tag="CBO1305" FT /product="heavy-metal binding protein" FT /db_xref="GOA:A5I1E1" FT /db_xref="InterPro:IPR000428" FT /db_xref="InterPro:IPR006121" FT /db_xref="InterPro:IPR017969" FT /db_xref="UniProtKB/TrEMBL:A5I1E1" FT /protein_id="CAL82853.1" FT /translation="MKMKASIEGMSCMHCVNHVKEALSELKGISNINVSLEGKFAEFDS FT TGEVSENDIRSAIEDFGYEFKGITTI" FT misc_feature 1422030..1422221 FT /note="Pfam match to entry PF00403 FT HMA,Heavy-metal-associated domain, score 44.1, E-value FT 3.4e-10" FT /inference="protein motif:Pfam:PF00403" FT misc_feature 1422039..1422128 FT /note="PS01047 Heavy-metal-associated domain." FT /inference="protein motif:ProSite:PS01047" FT repeat_region 1422413..1422505 FT /note="intergenic repeat 1" FT CDS 1422618..1424990 FT /transl_table=11 FT /locus_tag="CBO1306" FT /product="putative cation-transporting ATPase" FT /db_xref="GOA:A5I1E2" FT /db_xref="InterPro:IPR000695" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023298" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR023300" FT /db_xref="UniProtKB/TrEMBL:A5I1E2" FT /protein_id="CAL82854.1" FT /translation="MTKINKNIIKGLSKAEVLHRIKDGKVNILPKAPSRTIGQIVRANL FT FTSYNALNAILAIIVFMAGSPKNAVFAGVIITNTIIGMFQEIRAKGILERLSVLNEKTV FT DVIREGEINNINVEEIVLDDIIVLKAGDQILVDCELLSHNEIEVDESLITGEPDSILKI FT KNDKLLSGSFVSAGNAYAKVINVGENTYAAKLAEEAKKFKLINSELQISINKIFRIIMW FT LAIPIGSLLIFTQLFHVKKSWQDAVLGSVSGIVGMVPEGLVLLTSATFVVAVIRLSKWD FT TLIQELPATEVLARVDVLCLDKTGTITKGDLKVTEVQCLNNEDIKHIDKIISAIVHSFK FT NGNATEKALLERYESNPNLKIKNKIPFSSKRKWSAVEFEEEGAFILGAPEMILKDEYKH FT IKNKIEKAAKEGKRVLLLAKYEGENFNENLKGSVKEIALIFIEDIIRENAEEIIDYFNK FT EQVNLKIISGDNPITVSSIAKKVGIKNAENYIDARELPEDEEELKRVVDKISVFGRVSP FT HQKKSIVKALKSNGHTVAMTGDGVNDVLALKESDCGIAMASGSEATKAVAQLVLLNSDF FT AAIPQVVLEGRRLINNLEKVSELFLSKTAYFIILSIMFALLVKPFPIIPIQLTLIGSLS FT IGIPSFFLAISPNEDVIKNDFLKRILEVSIPNGILIGISTALMFLLGYHTGLSLEQCRT FT LSLVTFGSLSLFILLKVSTPLNFYRVSIVVSMTILFVLAFLIPFTRRIFVIEYFGVEYI FT IPIIFIYSVAMILMLIIPKINRIIFKRVNLKKSMDRL" FT misc_feature order(1422750..1422809,1422822..1422878,1423263..1423331, FT 1423374..1423442,1424403..1424471,1424484..1424552, FT 1424610..1424678,1424691..1424744,1424763..1424831, FT 1424859..1424927) FT /note="10 probable transmembrane helices predicted for FT CBO1306 by TMHMM2.0 at aa 45-64, 69-87, 216-238, FT 253-275,596-618, 623-645, 665-687, 692-709, 716-738 and FT 748-770" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1422825..1423493 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 140.9, E-value 2.5e-39" FT /inference="protein motif:Pfam:PF00122" FT misc_feature 1423503..1424297 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 80.1, E-value 4.9e-21" FT /inference="protein motif:Pfam:PF00702" FT misc_feature 1423521..1423541 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT /inference="protein motif:ProSite:PS00154" FT repeat_region complement(1425138..1425326) FT /note="intergenic repeat 1" FT CDS 1425468..1427186 FT /transl_table=11 FT /locus_tag="CBO1308" FT /product="putative ABC transporter, ATP-binding/permease FT protein" FT /db_xref="GOA:A5I1E3" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:A5I1E3" FT /protein_id="CAL82855.1" FT /translation="MLKEFISYYKPHKELFVLDMIAAFIVALCDLFYPMITRQIINDII FT PNGKIRLLFFWAISLLIIYIMKYFLNHFIQYWGHMVGVRIQADMRKRVFNHLQTLPFTY FT FDENKTGVIMSRIINDLMEISELAHHGPEDLFISIIMLIGSFIILCTINIPLTIISFIF FT IPILVWFSMKNRLKMEKAFMDSRVKIGDLNAELENSIAGIRVAKAFTNRDYENEKFEMG FT NKRFVGARQMAYKSMADYFSGMYFFIDILDLIVLIAGGYFVYKNLINFGDLVAYLLFIK FT MFMTPIRKLISFVEQYQSGVTGFERYRQLLRVKPEEDKEEAEVLENIKGAIEFKNVSFK FT YDEDTHILNDLSFKVEEGKTLALVGPSGGGKTTLCNLIPRFYNIDNGDILIDNNSIYDV FT KIGSLRKNIGIVQQDVFLFTGTIKENILYGNPEASYEEVVKAAKLANIHEFIESLPEGY FT NTYIGERGIKLSGGQKQRLSIARVFLKNPPILILDEATSALDNATEYLIQKSLEKLSNG FT RTTIVVAHRLSTIKNADEIMVLTDKGIEERGTHEELLALDGIYSELNRNIEKTKG" FT misc_feature order(1425510..1425563,1425621..1425689,1425873..1425977, FT 1426188..1426256) FT /note="4 probable transmembrane helices predicted for FT CBO1308 by TMHMM2.0 at aa 15-32, 52-74, 136-170 and FT 241-263" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1425513..1426328 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 128.3, E-value FT 1.5e-35" FT /inference="protein motif:Pfam:PF00664" FT misc_feature 1426539..1427093 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 226.2, E-value 4.9e-65" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1426560..1426583 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1426872..1426916 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1427524..1428318 FT /transl_table=11 FT /locus_tag="CBO1309" FT /product="putative membrane-associated protease" FT /db_xref="GOA:A5I1E4" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:A5I1E4" FT /protein_id="CAL82856.1" FT /translation="MAYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGY FT VGLNKNIIQPYSKLAGEILAYIFFIKNYIKDNRYKLKFKNTLHFKGYVFIAMLIIGYIL FT VYDNTIDIVLSKVVKNSWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDELLV FT KYNYKKAIIISALIFAAIHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFC FT NIAKFYPSIYKTKFNIIRLGIGIAILATLAYIFLKDRKKVIL" FT misc_feature order(1427596..1427664,1427677..1427745,1427782..1427841, FT 1427926..1427994,1428031..1428090,1428100..1428168, FT 1428229..1428288) FT /note="7 probable transmembrane helices predicted for FT CBO1309 by TMHMM2.0 at aa 25-47, 52-74, 87-106, FT 135-157,170-189, 193-215 and 236-255" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1427929..1428201 FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 91.9, E-value 1.3e-24" FT /inference="protein motif:Pfam:PF02517" FT CDS 1428482..1428838 FT /transl_table=11 FT /locus_tag="CBO1310" FT /product="putative iron-molybdenum protein" FT /db_xref="InterPro:IPR003731" FT /db_xref="UniProtKB/TrEMBL:A5I1E5" FT /protein_id="CAL82857.1" FT /translation="MKIAMPKNEKIINQHFGKSKSFAIVTVDDNKIIDIKDISTESLQH FT NHGGLSSLLVEEKVELVITGGIGQGAYDALIKEGLKVIRGAKGTIEDVLQQYLRGELQD FT RKVMCNHHGEHHHH" FT misc_feature 1428503..1428778 FT /note="Pfam match to entry PF02579 FT Nitro_FeMo-Co,Dinitrogenase iron-molybdenum cofactor, score FT 77.0,E-value 4.2e-20" FT /inference="protein motif:Pfam:PF02579" FT CDS 1429257..1430150 FT /transl_table=11 FT /locus_tag="CBO1311" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003797" FT /db_xref="UniProtKB/TrEMBL:A5I1E6" FT /protein_id="CAL82858.1" FT /translation="MKEYIIMTDSCCDLPSEYIENNHIPYIPLTCNVEGKEYIDNFGQS FT LPYKQFYEAMIKGEIPKTSQPSPEAYYKVFKELIDKDKDILYVCVSSGLSGTYNSANIA FT KNMILDEFRNARIEIVDVLTASLGQGIMVMKAMDMKKNGLTIDEVTSYLEENKLNLNSY FT MVVNDLIHLKRGGRISTAAALIGTVLNIKPILTLNDEGRVITVRKAKGRKVAIRKLAEI FT VIERIKNPEEEIVAISHGDSDLDAEKLRERILKEIKVKDIIINYVGPVVGTYGGPGSLN FT VFFMSDHRQNHIIDIN" FT misc_feature 1429473..1430117 FT /note="Pfam match to entry PF02645 DUF194, Uncharacterized FT protein, DegV family COG1307, score 232.2, E-value 7.6e-67" FT /inference="protein motif:Pfam:PF02645" FT misc_feature 1430040..1430108 FT /note="1 probable transmembrane helix predicted for CBO1311 FT by TMHMM2.0 at aa 262-284" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1430187..1430651) FT /transl_table=11 FT /locus_tag="CBO1312" FT /product="putative 5-nitroimidazole antibiotic resistance FT protein" FT /db_xref="GOA:A5I1E7" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="InterPro:IPR024747" FT /db_xref="UniProtKB/TrEMBL:A5I1E7" FT /protein_id="CAL82859.1" FT /translation="MFKEIRRKEKKLNNEESISLLKESNYGILSVCLNNGYAYGVPLNF FT VYSNGAIYFHCAKEGQKLEAINGNDKVSFSIVNNVELLPSKFDTNYESVITFGKAYEVF FT EDEKKQALLALINKYSKDYLKEGTAYIERAQDKIKIIKIEIEHITGKGQR" FT CDS 1430964..1431191 FT /transl_table=11 FT /locus_tag="CBO1313" FT /product="hypothetical membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1E8" FT /protein_id="CAL82860.1" FT /translation="MNISKSGLTFLQFALSFIIYKLLMNSFNFNYNLFSDKFNILKFFM FT DFGCWVIVYLIVCFIFSKLVTIKKVSRILF" FT misc_feature order(1430982..1431050,1431093..1431161) FT /note="2 probable transmembrane helices predicted for FT CBO1313 by TMHMM2.0 at aa 7-29 and 44-66" FT /inference="protein motif:TMHMM:2.0" FT CDS 1431216..1431644 FT /transl_table=11 FT /locus_tag="CBO1314" FT /product="putative nucleotide-binding protein" FT /db_xref="GOA:A5I1E9" FT /db_xref="InterPro:IPR001310" FT /db_xref="InterPro:IPR011146" FT /db_xref="InterPro:IPR011151" FT /db_xref="UniProtKB/TrEMBL:A5I1E9" FT /protein_id="CAL82861.1" FT /translation="MKNTMENCNFCKIINKEKKANIVYQNDLVCCFLAEEPINEGHMLI FT APKKHYLDLDQMDDETAIEIMKVSKIMVKVLKDTYKSDGYSIMQNGGSFNNVGHYHMHL FT FPRYKGDSFSWSYGEEDSSTLEVVSKKIQQQLKDYVIK" FT misc_feature 1431237..1431545 FT /note="Pfam match to entry PF01230 HIT, HIT domain, score FT 101.0, E-value 2.5e-27" FT /inference="protein motif:Pfam:PF01230" FT CDS complement(1431800..1432174) FT /transl_table=11 FT /locus_tag="CBO1315" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR007165" FT /db_xref="UniProtKB/TrEMBL:A5I1F0" FT /protein_id="CAL82862.1" FT /translation="MDERKRENDSNNMSSGIMGYIIRLIVSMVVLSVTAFFTPGFTIHG FT FWAVLLAAVIISAIDYLVEKLMGVDASPFGRGLKGFVISAIIIYLTQFLVPTMRVSIVG FT AIIAALVIGVIDAILPGRVM" FT misc_feature complement(order(1431818..1431877,1431890..1431958, FT 1431986..1432045,1432064..1432132)) FT /note="4 probable transmembrane helices predicted for FT CBO1315 by TMHMM2.0 at aa 15-37, 44-63, 73-95 and 100-119" FT /inference="protein motif:TMHMM:2.0" FT CDS 1432467..1433234 FT /transl_table=11 FT /locus_tag="CBO1316" FT /product="putative type IV prepilin signal peptidase" FT /db_xref="GOA:A5I1F1" FT /db_xref="InterPro:IPR000045" FT /db_xref="InterPro:IPR010627" FT /db_xref="UniProtKB/TrEMBL:A5I1F1" FT /protein_id="CAL82863.1" FT /translation="MNIIVLILGIIIGSFLNVCIYRIPKGESIIFPPSYCEKCGVNIKI FT YNLIPVVSYIFLRGRCKCCKNKISLRYPLVELLTGILFLSIYHLCGLNFSFIKYIIFVS FT FIIVIGFIDLDTTDVYSKITISAMIIGVIYILIEKFYFGYGIKTYMYAVLLCTTAIGTI FT IFTTEGMGSGDLDIYIVVSLFLGLKITAMTLFFSFIFGALIGIFLIISKRKTKKDYMPF FT GPFIAMASIFSILFGDKVSLLYISFITNCFLNR" FT misc_feature 1432473..1433216 FT /note="Pfam match to entry PF01478 Peptidase_A24, Type IV FT leader peptidase family, score 125.7, E-value 9.2e-35" FT /inference="protein motif:Pfam:PF01478" FT misc_feature order(1432476..1432529,1432668..1432736,1432749..1432802, FT 1432821..1432880,1432908..1432961,1432995..1433096, FT 1433139..1433207) FT /note="7 probable transmembrane helices predicted for FT CBO1316 by TMHMM2.0 at aa 4-21, 68-90, 95-112, FT 119-138,148-165, 177-210 and 225-247" FT /inference="protein motif:TMHMM:2.0" FT CDS 1433826..1434953 FT /transl_table=11 FT /locus_tag="CBO1317" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR012507" FT /db_xref="UniProtKB/TrEMBL:A5I1F2" FT /protein_id="CAL82864.1" FT /translation="MNFIDILKRNIKKLTKSDVKVIILTIIVIVSILMPSSYIRKEAIH FT GKITEIENKEGEKGQLSRSKVKVKILNGKYKDKVIDMDNLVSDKTYHETYAKKGNEVLI FT NIEEDDKGNIKKAYIYEVVRYKYLKGIIILFLVLLSLLGGMQGIRSVLALLITTYAVLK FT VLIPLIMVGFNPILVSIIICIGVSILNLLIISGKNKKSYAAIIGTLGGVMVAGIIALIS FT SNILQVIGLTDEEAQMLIYITGNPKFNFKGLLFSGILMGALGAVMDISMSIASSMKEVK FT INNPDISKKQLVKAGFNVGRDIMGTMANTLILAYAGGAMYTLLLISSYKLPFERMLNQD FT VMAAEIIQALCGSIGLIFTIPITTLAVSLIGVDKE" FT sig_peptide 1433826..1433946 FT /locus_tag="CBO1317" FT /note="probabilty 0.765, with cleavage site probability FT 0.620 between residues 41 and 42" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1433886..1433942,1434213..1434281,1434339..1434407, FT 1434450..1434518,1434579..1434647,1434744..1434812, FT 1434873..1434941) FT /note="7 probable transmembrane helices predicted for FT CBO1317 by TMHMM2.0 at aa 21-39, 130-152, 172-194,209-231, FT 252-274, 307-329 and 350-372" FT /inference="protein motif:TMHMM:2.0" FT CDS 1435741..1437108 FT /transl_table=11 FT /locus_tag="CBO1318" FT /product="putative potassium uptake protein" FT /db_xref="GOA:A5I1F3" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR006036" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:A5I1F3" FT /protein_id="CAL82865.1" FT /translation="MHVIIVGNGKVGYTLAKHLSQENNDVIVIDKNAEALQKAMDNLDV FT MCIKGNGTRVSVLKEAEISRADVVIAVTNSDERNMLCCLAAKRFGAKHTIARIRDPEYA FT EELTMLKRELEIDMIINPEKEAALEIAQLIKFPTVSSVENFAQGKVDLVSFRLGKEDFI FT AGKSISDIDLKKCSVLFCAVERDGRVFMPTGDFILKSNDKVYVIGDHENITLFLKYLGK FT HQNKIKSVMVIGGGRITHYLTKLINKVGANIKIVEKNYIKCKDLNETLPEAIIINGDGT FT EQELLESENLEDVDAFIALTDRDEENIVASLFALNANIHNVITKITRVNYNHIVKNIGV FT ESVISPKTLTANKIITYVRGLKNKKGSFIENLYKIVGEQAEAVEFAANSTTKCLNVALK FT DIKIKKGVLIAAIVRNKDIIIPNGEDSIKDGDNVIIVTEENNIMDINNILEGGNLI" FT misc_feature 1435744..1436106 FT /note="Pfam match to entry PF02254 TrkA-N, TrkA-N FT domain,score 117.8, E-value 2.1e-32" FT /inference="protein motif:Pfam:PF02254" FT misc_feature 1436149..1436412 FT /note="Pfam match to entry PF02080 TrkA-C, TrkA-C FT domain,score 60.0, E-value 5.4e-15" FT /inference="protein motif:Pfam:PF02080" FT misc_feature 1436425..1436778 FT /note="Pfam match to entry PF02254 TrkA-N, TrkA-N FT domain,score 54.0, E-value 3.3e-13" FT /inference="protein motif:Pfam:PF02254" FT misc_feature 1436845..1437099 FT /note="Pfam match to entry PF02080 TrkA-C, TrkA-C FT domain,score 49.1, E-value 1.1e-11" FT /inference="protein motif:Pfam:PF02080" FT CDS 1437105..1438550 FT /transl_table=11 FT /locus_tag="CBO1319" FT /product="putative potassium uptake protein" FT /db_xref="GOA:A5I1F4" FT /db_xref="InterPro:IPR003445" FT /db_xref="UniProtKB/TrEMBL:A5I1F4" FT /protein_id="CAL82866.1" FT /translation="MNYPIVFKVLGDVIKYEALVMIFPLIASLYYGGKDANSFIITIAI FT MLCTAVIMSNIRPKNRTFYAKEGFLSVSVCWIVISLFGALPFYISGAIPSFVDCIFETV FT SGFTTTGATILTEVESLSKGILFWRSFTHWIGGMGILIFTLALMPSIGGTTIHLLKAES FT PGPTPGKIVPRIKETAKIMYLIYFAMTILQISLLLIAGMEPYDALIHAFGTAGTGGFSN FT MNSSVGAYNNVYIEVIITVFMLLFGVNFNVYFQLIAGNIKQAFKNEEVKYYIGMVLIAM FT TIIAFNIKGMYGGSLKEGFRQSSFQVASIVTTTGYATTNFDLWPTLSKSILALLMLTGC FT CAGSTGGGIKTVRIVLLFKAMKREISKIIHPRMVNSVKLDGKVVEDETISQVGLFVFAY FT VSIIVIAVLLVSIDGMDMETTLSSVLATIGNIGPGFKVVGPIGNFSSYSSFSKIVFSFC FT MLAGRLEIYPMLVMLSPSSMRKI" FT misc_feature order(1437141..1437200,1437213..1437272,1437309..1437377, FT 1437495..1437563,1437651..1437710,1437798..1437866, FT 1437924..1437992,1438092..1438160,1438278..1438346, FT 1438461..1438529) FT /note="10 probable transmembrane helices predicted for FT CBO1319 by TMHMM2.0 at aa 13-32, 37-56, 69-91, FT 131-153,183-202, 232-254, 274-296, 330-352, 392-414 and FT 453-475" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1437552..1438538 FT /note="Pfam match to entry PF02386 TrkH, Cation transport FT protein, score 186.7, E-value 4e-53" FT /inference="protein motif:Pfam:PF02386" FT CDS 1438741..1439022 FT /transl_table=11 FT /locus_tag="CBO1320" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1F5" FT /protein_id="CAL82867.1" FT /translation="MKYKPYLKKNLLSCVVLIILFIRIALMIEFCLIASNLINYCKKNI FT YNFIYKILREENNFLKLIPQKSKESLENKLNIYLYSVFYNNKITYDRI" FT sig_peptide 1438741..1438834 FT /locus_tag="CBO1320" FT /note="probabilty 0.699, with cleavage site probability FT 0.542 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1438783..1438851 FT /note="1 probable transmembrane helix predicted for CBO1320 FT by TMHMM2.0 at aa 15-37" FT /inference="protein motif:TMHMM:2.0" FT CDS 1439124..1441691 FT /transl_table=11 FT /locus_tag="CBO1321" FT /product="putative DNA helicase" FT /db_xref="GOA:A5I1F6" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR006054" FT /db_xref="InterPro:IPR006055" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR013520" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:A5I1F6" FT /protein_id="CAL82868.1" FT /translation="MLDIYLNDKQKKVINTLDKNILLLSSAGTGKTKTLSMRIGNIIAK FT NLALGEQILCLTFTNRACKEMKEKIIETVGKEGLKVTVKTFHSFCFDVIKKEAKKNTDI FT SSDFTIYDEEDTKEIISELNSYKFNVSCLQRFINIVKEKSINYKDRDYKDVIDTMIKYN FT SNIFNDICKNEKYMVDKTLVDYLKIYGYLMVISYDKKLYERHGLDFNDLIIKVYDLFQK FT DKITTYWREKYKFIHIDEMQDTSEIEYNIVSKLFRNNNIMLSGDYYQTIYEWRGSNPII FT IFDKYKKEYNPEFIVFDKNYRSSEILLKASYEFLLNAFGKDVNEIYKEGIEPKANIKGD FT LIEFKKAYDFMEEATFIFNKIKSLKVEKLSRVAILTRNNRINIALSEKFKILNSKLPKE FT ERVGFLLVDEFKFFRREEIKDVLAYLKLIVNDFDSNSLKRILKKFGKGIGERTIEEIEK FT EENIKIGVRLTDLIHKNTQEYGDYYELLTRGLDNENVVVFDVESTGINTTEDEIVQIAG FT IKINNKGEVIESFQRFLTPKKFVGDSYLVHGFSDQFLKENGENKKVVLKDFLEFIKDTV FT IVGHNVAFDISILNSELERLSLEKASFKTYYDTLDIARRFYPNLTNHKLETLSKLFNTE FT TKSSHDAMDDILATKDVLMAMLKEKVKPTIINRMVVYGKYIKKFQPIYKEITNLKKLTY FT IKNPKDIIGEIVNKTKIKEIYKDQYIKINNLREFFVIAKEIENKEISSRDNLIELLKIT FT SLSNSELDRMLTKYPRVPIITVHQAKGAEFDYVFLAGLQNNIFPNYMAVKEGNEIEEKR FT LFYVAMTRAKKYLYISFSEYEHNRRKAKSMLIDYIPKDYLKYM" FT misc_feature 1439139..1440677 FT /note="Pfam match to entry PF00580 UvrD-helicase, UvrD/REP FT helicase, score 204.4, E-value 1.8e-58" FT /inference="protein motif:Pfam:PF00580" FT misc_feature 1440606..1441106 FT /note="Pfam match to entry PF00929 Exonuclease,Exonuclease, FT score 114.7, E-value 1.8e-31" FT /inference="protein motif:Pfam:PF00929" FT repeat_region 1442197..1442553 FT repeat_region 1442908..1442946 FT CDS complement(1442994..1444124) FT /transl_table=11 FT /locus_tag="CBO1322" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR012867" FT /db_xref="InterPro:IPR014574" FT /db_xref="UniProtKB/TrEMBL:A5I1F7" FT /protein_id="CAL82869.1" FT /translation="MHENLFLSILLGFCNLLLLAFQIVTPKTTRKDIFLGVRIPEEESE FT KMEIKNIYRSFVLWNIIISLPVIFLLSFIVYKFNNIGLFVLFTFIYIFISFLIYLKFNN FT DVKKLKSNKNWFKNKKQVIAVDTEFSSENANKSLISPWWFLIPILIILITIFMNIKAYP FT NLPNKVATHWDFNGNVNGYQNKSTFLIYQMPLMELFITSIFFLCYKIIGWSKKQISAVN FT PEESKTRNKLFRRILSIYMTFSAIAMTIFLSIINFEIMKVIDINDKYMMYVSLIFTLSI FT IIATILLGVKVGQGGSNLKLNYKNDNKNNFINKDDDDHWILGNTIYYNKKDPSLFIEKR FT FGIGWTINAGRPLGLIVYISLILIIIVSIIASFFAK" FT misc_feature complement(order(1443000..1443068,1443249..1443317, FT 1443360..1443419,1443489..1443557,1443648..1443716, FT 1443825..1443884,1443897..1443962)) FT /note="7 probable transmembrane helices predicted for FT CBO1322 by TMHMM2.0 at aa 9-30, 35-54, 91-113, FT 144-166,190-209, 224-246 and 307-329" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1444139..1444513) FT /transl_table=11 FT /locus_tag="CBO1323" FT /product="GntR-family transcriptional regulator" FT /db_xref="GOA:A5I1F8" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I1F8" FT /protein_id="CAL82870.1" FT /translation="MILHIDFESQTPIYEQLKRQIIEGIAKGHLKTGDPLPSVRQLAED FT IGINLHTVNKVYNILKAEGYVVIDRRVGAVISTNLPKKTDEYKNNLKDVLKYITADAHC FT RGFSKEEFVKFCEDILKEYE" FT misc_feature complement(1444286..1444477) FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 64.5, E-value FT 2.4e-16" FT /inference="protein motif:Pfam:PF00392" FT misc_feature complement(1444334..1444408) FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT /inference="protein motif:ProSite:PS00043" FT repeat_region 1444646..1444689 FT /rpt_family="CB.840" FT /rpt_type=INVERTED FT /rpt_unit_seq="ttagatatacgtaagaaatattaatatttcttacgtatatctaa FT " FT /inference="ab initio prediction:REPuter" FT CDS complement(1444855..1445634) FT /transl_table=11 FT /locus_tag="CBO1324" FT /product="putative cell wall hydrolase" FT /db_xref="GOA:A5I1F9" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR011105" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:A5I1F9" FT /protein_id="CAL82871.1" FT /translation="MTKHKSLKTLLATLTFCVGLSSPVFAADYRVSSGDSLYKIGQLFN FT VSSDTIIKNNNLKESTIHPGQVLNIPCNTYTVKSGDSLFLISKAQGISLYNLRKANNKL FT DDTIYPGQVLNLPGKTSSNTSPAPAPTTPKPIVNYTESDLDLLARLITAEAQSEPYSAQ FT VAVASVVINRIKSSQFPNSISSVIYQKSDGYYQFTPVLNGWINKPATETSKKAAKEALY FT GSDPSKGALYYFDNTATNKWLWSKPITARIGNMVYVK" FT misc_feature complement(1445284..1445412) FT /note="Pfam match to entry PF01476 LysM, LysM domain,score FT 57.8, E-value 2.5e-14" FT /inference="protein motif:Pfam:PF01476" FT misc_feature complement(1445422..1445550) FT /note="Pfam match to entry PF01476 LysM, LysM domain,score FT 58.5, E-value 1.5e-14" FT /inference="protein motif:Pfam:PF01476" FT sig_peptide complement(1445553..1445634) FT /locus_tag="CBO1324" FT /note="probabilty 1.000, with cleavage site probability FT 0.987 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_binding complement(1445640..1445762) FT /locus_tag="CBO1324" FT /bound_moiety="unknown" FT /note="ydaO/yuaA element" FT CDS 1446393..1446980 FT /transl_table=11 FT /gene="rbr" FT /gene_synonym="rubY" FT /locus_tag="CBO1325" FT /product="putative rubrerythrin" FT /db_xref="GOA:A5I1G0" FT /db_xref="InterPro:IPR003251" FT /db_xref="InterPro:IPR004039" FT /db_xref="InterPro:IPR009040" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="InterPro:IPR024934" FT /db_xref="UniProtKB/TrEMBL:A5I1G0" FT /protein_id="CAL82872.1" FT /translation="MKSLRGTKTAENLLKSFAGESQARGRYTYYASVARKEGFIQISNI FT FIETAEQEREHAKRFYKFLKEDLQGDAIEITASYPIALYDNTADNLKAAASGENEEWTE FT LYPSFAKVAREEGFPEVAVAYDMISKVEKEHEKRYLKLLENVENDKVFKKDEKVLWKCS FT NCGFIYEGTAAPEKCPSCLHPKSYFEIACENY" FT misc_feature 1446417..1446830 FT /note="Pfam match to entry PF02915 FT Rubrerythrin,Rubrerythrin, score 224.7, E-value 1.4e-64" FT /inference="protein motif:Pfam:PF02915" FT CDS 1447275..1448729 FT /transl_table=11 FT /locus_tag="CBO1326" FT /product="putative cell wall hydrolase" FT /db_xref="GOA:A5I1G1" FT /db_xref="InterPro:IPR007253" FT /db_xref="UniProtKB/TrEMBL:A5I1G1" FT /protein_id="CAL82873.1" FT /translation="MKKIMALVISSAIVLGGKGVAGAKGDYNVNRISGKNRYETSINIA FT KHYNSEKFENVIIANGNDFPDALAGSALSKKLNAPILLIDENVNSSRETINLIKSKLAK FT NGSIYILGGEGAVDRVYEDWFKDFGYKNIKRLGGINRFATNKNIVKSLNVEKGTPIVIV FT NGFGFADALSVSSSAASKGYPIFMSNADKLPNEIKDIIKDISPTKAFIIGGEGVMRNSI FT VDELKNIVPSLNKEDIERVEGKNRYETSLNVCSKFNLLSDNAIVASGENFPDALSGSAL FT ASKMDAPIILTDGVNILKQKEYLDNNNYKNLILLGGTGAINTDSQRILENKPVISDKDA FT KNLLFNGDEEFKKILKIEVHKESYIDLDGRSYAPVKEDLSKYDSIDDYLNKNFKLSTYY FT TENFMKNMINFEFKNIDGQCYMGYGNPEPRLIVKDAKIIEKKYDGNKVNVSLNGYYPIP FT GHVSNAKATLIYDGTKWVIDEFDNWF" FT sig_peptide 1447275..1447341 FT /locus_tag="CBO1326" FT /note="probabilty 0.999, with cleavage site probability FT 0.934 between residues 23 and 24" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1447362..1447643 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 44.5, E-value 2.5e-10" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 1447674..1447949 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 67.8, E-value 2.5e-17" FT /inference="protein motif:Pfam:PF04122" FT misc_feature 1447989..1448270 FT /note="Pfam match to entry PF04122 CW_binding_2, Putative FT cell wall binding repeat 2, score 48.9, E-value 1.2e-11" FT /inference="protein motif:Pfam:PF04122" FT CDS complement(1448902..1450932) FT /transl_table=11 FT /gene="ptsG" FT /gene_synonym="ptsX" FT /gene_synonym="crr" FT /locus_tag="CBO1327" FT /product="PTS system, glucose-specific IIABC component" FT /EC_number="2.7.1.69" FT /db_xref="GOA:A5I1G2" FT /db_xref="InterPro:IPR001127" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR011299" FT /db_xref="InterPro:IPR011535" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:A5I1G2" FT /protein_id="CAL82874.1" FT /translation="MFKKSFGVLQQVGKALMLPVALLPAAGILLAFGNMFQNPDFLKLA FT PAFGSTGFQAFARVMEQSGNIIFANLALLFAVGVAVGLAAGEGVAALAAIVGFLIMNTT FT MGLVVGVTPGLIGKSHPEFASVLGIPTLQTGVFGGIIMGIIAASLYKKYYNIELPSYLG FT FFAGKRFVPIITAAVAILVGLIMVVIWPPIQHGLNSFSHNMIDANRTLAAFIFGVIERA FT LIPFGLHHIFYNPFWYQFGEYINKAGQVINGDQAIFFQQIKDHAPLTAGTFMTGKFPFM FT MFGLPAAALAIYQEAKPEKKKLVGGIMASAALTSFLTGITEPIEFSFLFVAPVLFGIHC FT IFAGLSFMVMQILNIKIGMTFSGGVIDFLIFGVVPNRTKWWLVIPVGLAFSAIYYFGFR FT FAIRKWNLKTPGREDDAGSESVNYSSEVSLAAKVLEALGGKENLANLDACITRLRVSVN FT SIDKVNKEELKSLGASGVMVVGNNIQAIFGPKSDQLKEQIKDVISGKIITKDVKIEEPK FT KETVKVSSKDKFVAPIEGKILSITDVPDEVFSQKMMGDGFAIEPKNGTVVSPVDGVITT FT VFPTKHAIGITAENGLELLIHFGIDTVNLKGEGLEALVEQDAKVKAGDPILKVDIDKIK FT DEVPSIITPIIFTNLTDDQKLEIVKLGSHVKAGEEDIVKLK" FT misc_feature complement(1448986..1449300) FT /note="Pfam match to entry PF00358 FT PTS_EIIA_1,phosphoenolpyruvate-dependent sugar FT phosphotransferase system, EIIA 1, score 219.9, E-value FT 4e-63" FT /inference="protein motif:Pfam:PF00358" FT misc_feature complement(1449124..1449162) FT /note="PS00371 PTS EIIA domains phosphorylation site FT signature 1." FT /inference="protein motif:ProSite:PS00371" FT misc_feature complement(1449541..1449645) FT /note="Pfam match to entry PF00367 FT PTS_EIIB,phosphotransferase system, EIIB, score 56.2, FT E-value 7.4e-14" FT /inference="protein motif:Pfam:PF00367" FT misc_feature complement(order(1449727..1449795,1449808..1449876, FT 1449895..1449963,1449973..1450026,1450063..1450131, FT 1450234..1450302,1450360..1450428,1450498..1450566, FT 1450600..1450668,1450678..1450746,1450831..1450890)) FT /note="11 probable transmembrane helices predicted for FT CBO1327 by TMHMM2.0 at aa 15-34, 63-85, 89-111, FT 123-145,169-191, 211-233, 268-290, 303-320, 324-346, FT 353-375 and 380-402" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1449901..1450896) FT /note="Pfam match to entry PF02378 FT PTS_EIIC,Phosphotransferase system, EIIC, score 380.9, FT E-value 1.4e-111" FT /inference="protein motif:Pfam:PF02378" FT sig_peptide complement(1450782..1450932) FT /gene="ptsG" FT /gene_synonym="ptsX" FT /gene_synonym="crr" FT /locus_tag="CBO1327" FT /note="probabilty 0.996, with cleavage site probability FT 0.603 between residues 49 and 50" FT /inference="protein motif:SignalP:2.0" FT CDS 1451384..1452031 FT /transl_table=11 FT /locus_tag="CBO1328" FT /product="putative undecaprenyl pyrophosphate synthetase" FT /db_xref="GOA:A5I1G3" FT /db_xref="InterPro:IPR001441" FT /db_xref="UniProtKB/TrEMBL:A5I1G3" FT /protein_id="CAL82875.1" FT /translation="MRVPNHIGIIPDGNRRWANNKGMEKQCGYKFGLNPGLILFRLCKA FT VGINEITYYGFTTDNNKRPKVQRQSFTKACVEAVEMLCNEDASLLVVGNTESSMFPKEL FT LPYTKERKVFKKGGIKVNFLVNYGWEWDLQALENNKLSSRNKINKHIKSTDISRVDLII FT RWGGRRRLSGFLPIQSVYSDFYIIEDYWPDFKSEHLYEALEWYDKQDITLGG" FT misc_feature 1451411..1452028 FT /note="Pfam match to entry PF01255 UPP_synthetase,Putative FT undecaprenyl diphosphate synthase, score 22.1,E-value FT 2.5e-13" FT /inference="protein motif:Pfam:PF01255" FT CDS 1452418..1452927 FT /transl_table=11 FT /locus_tag="CBO1329" FT /product="highly repetetive hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1G4" FT /protein_id="CAL82876.1" FT /translation="MRDGNMNKMPMKENPMKENPMKEKPMGMKPMGHPMHKMCHPMHTM FT CHPMCYPMPFMSPMMGMGDMMGMDGMMGMDGMMGMDGMMGMDDMMGMDDMMGMSPMMGM FT ENMMGMSSMHPMQCCICLMIMPCHMMPMHMHPMKHMKHMKEKHMKENVKEMKHMKDRDP FT DYIDME" FT repeat_region 1452583..1452741 FT /note="repetetive region containing large anumber of the FT triplet M(M/D)G" FT CDS 1453222..1453635 FT /transl_table=11 FT /locus_tag="CBO1330" FT /product="putative transcriptional regulator" FT /db_xref="InterPro:IPR000944" FT /db_xref="UniProtKB/TrEMBL:A5I1G5" FT /protein_id="CAL82877.1" FT /translation="MKITQEADYALRVILHLSKLGYGERVEARIISEQEGLPLRFLLKL FT LRKLTKSGIVVSFRGVKGGYALNKQPKDINLKDVIEAIDGPICINRCIYDPRYCNAGKN FT GNCEIHRALCKIQRKLVSELEAVNFQEILDKDR" FT misc_feature 1453222..1453593 FT /note="Pfam match to entry PF02082 Rrf2, Transcriptional FT regulator, score 107.5, E-value 2.7e-29" FT /inference="protein motif:Pfam:PF02082" FT misc_feature 1453366..1453422 FT /note="PS01332 Uncharacterized protein family UPF0074 FT signature." FT /inference="protein motif:ProSite:PS01332" FT CDS 1453844..1455730 FT /transl_table=11 FT /locus_tag="CBO1331" FT /product="putative oxidoreductase, acetyl-CoA synthase FT subunit" FT /db_xref="GOA:A5I1G6" FT /db_xref="InterPro:IPR004137" FT /db_xref="InterPro:IPR010047" FT /db_xref="InterPro:IPR011254" FT /db_xref="InterPro:IPR016099" FT /db_xref="InterPro:IPR016101" FT /db_xref="UniProtKB/TrEMBL:A5I1G6" FT /protein_id="CAL82878.1" FT /translation="MSMCTNCKTCKSADKVLQGFISNMDMETSHHRVEDQKIKCGFGQL FT GVCCRLCSNGPCRITPKSPRGVCGANADTIVARNFLRAVAAGAGCYLHIVENTARNLKA FT TGESKGKIKGEKALDRLAEIFEIKEKDIYQKAVKVADMVLKDLYKPRYEKMEIVEKMAY FT KPRYENWEKLNILPGGAKSEVFDAVVKTSTNLNSDPVEMLLHCLNLGISTGLYGLTLTN FT LLNDVMLGEPVIRPAKVGFRVIDESYINIMITGHQHSTIAHLQDRLIEEDVVEMAKKVG FT AKGFRLVGCTCVGQDLQLRGEHYKEVFSGHGGNNFTSEAIIATGAIDAIVSEFNCTLPG FT IEPITENLKVKMICLDDVAKKSNAEYLEYSYEDREKISEHIIKEALDAYKERRQNIKVN FT IPRDHGYNDVITGVSEVSLKEFLGGTWKPLLDLIAKGKIKGVAGVVGCSNLTAMGHDVF FT TVELTKELIKRDIIVLSAGCSSGGLENVGLMSTSAASLAGDNLRAVCESLKIPPVLNFG FT PCLAIGRLEIVATELAKDLGIDLPQLPLVLSAPQWLEEQALADGAFGLALGLPLHLAIS FT PFIGGSKVVSKVLTEDLKTLTGGQLIIEDDVKKAADKLEAIVLDRRKKLGLK" FT misc_feature 1453982..1455676 FT /note="Pfam match to entry PF03063 Prismane, Prismane/CO FT dehydrogenase family, score 659.6, E-value 1.7e-195" FT /inference="protein motif:Pfam:PF03063" FT CDS 1455877..1456320 FT /transl_table=11 FT /locus_tag="CBO1332" FT /product="putative oxidoreductase, electron transfer FT subunit" FT /db_xref="GOA:A5I1G7" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5I1G7" FT /protein_id="CAL82879.1" FT /translation="MRRIMIKKDLCEGCLNCVLACMSEHNKRGKSIYDLDLEDKVNESR FT NHIELDMLGNKTPIFCRHCDNPECVNTCTTGAMSKDEKTGVVSYNEDKCASCFMCVMNC FT PYGVLKADEENSKVIIKCDLCNEREIPRCVENCPTGAIYVEEI" FT misc_feature 1456135..1456206 FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 23.2, E-value 5.7e-05" FT /inference="protein motif:Pfam:PF00037" FT misc_feature 1456156..1456191 FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 1456519..1457745 FT /transl_table=11 FT /locus_tag="CBO1333" FT /product="putative oxidoreductase, NAD/FAD binding subunit" FT /db_xref="GOA:A5I1G8" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:A5I1G8" FT /protein_id="CAL82880.1" FT /translation="MKYVIIGASAAGISAVKTLRTLDKDSQIVMISKDDKVYSRCLLHH FT FIGGNREIEGLSFIEKDFFAKYNVKWIKNKKVETVDIDKKVVKVQGKISEHYDKLLIAS FT GSYASIPPIKNLREAKRVYTLRNLDDAIAIKEEAKKIKKAAVIGAGLVGIDATMGLLEN FT DVEVTVIEMGNRMLPLQLDQRASKTYEELFRKHNVNIKTSVGAEEALIDGNRNVCGIKL FT SNGEKIDCDIIIVAAGVRPNIDFIKDERIKIERGIVINDNCETTVKDIYAAGDVTFRAP FT IWPIAMKQGRIAACNMAGEKKLLDDNFGARNSMNFLGVYTISLGIVEPQDESYKVDIID FT KNGVYKKIIHKDGIIYGAILQGDIAYAGVLTELIKNKIDISKIDKDIFDISFADFFNIK FT ENGEFSYKK" FT misc_feature 1456522..1457373 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 226.2, E-value FT 4.9e-65" FT /inference="protein motif:Pfam:PF00070" FT CDS complement(1457787..1458971) FT /transl_table=11 FT /locus_tag="CBO1334" FT /product="putative membrane protein" FT /db_xref="GOA:A5I1G9" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:A5I1G9" FT /protein_id="CAL82881.1" FT /translation="MNYSFIFASLCLLSFINFKNNINIAYFSSNQSLDLVQILGIALIL FT ISISLLQTKGKRQKYLHKLWRDKMLKNINDKKLGLILVLLAAMFWGYVGVPTKHLADLG FT FDNYTISFFKTSIPAIFYFIYSFRRDPSLFKVDKKGILFFIIYGIVVIAGCFIAFNITI FT NLLPLALALATMFLYTSQIWVVTISYFMFKEKFTTQKAISMLLILIGCFMMCEMHKLGS FT FNLSTKGIFWGLISGFTFALQILLAKVSNEKYHYNHNSLLTYSFLFAAIFLFPFMDMKN FT NIHIFKNSNNLFFLFKNIFWSVVGTLIANTAYVKSVEYIEASIASMVSSLELVIASVLG FT FIVFNQSLNLVQILGMALILVSIILLEMKKSVFLKLFKKPNKNLEIISETTYEN" FT misc_feature complement(1457868..1458260) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 76.5, E-value 5.8e-20" FT /inference="protein motif:Pfam:PF00892" FT misc_feature complement(order(1457874..1457930,1457943..1458011, FT 1458030..1458098,1458141..1458194,1458231..1458284, FT 1458312..1458371,1458408..1458476,1458486..1458554, FT 1458591..1458644,1458687..1458740,1458819..1458878, FT 1458891..1458959)) FT /note="12 probable transmembrane helices predicted for FT CBO1334 by TMHMM2.0 at aa 5-27, 32-51, 78-95, FT 110-127,140-162, 166-188, 201-220, 230-247, 260-277, FT 292-314,321-343 and 348-366" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1458324..1458710) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 32.9, E-value 8e-07" FT /inference="protein motif:Pfam:PF00892" FT CDS complement(1459149..1459871) FT /transl_table=11 FT /locus_tag="CBO1335" FT /product="putative cyclic AMP-binding regulatory protein" FT /db_xref="GOA:A5I1H0" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR001808" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012318" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:A5I1H0" FT /protein_id="CAL82882.1" FT /translation="MIYKISLKKGFGMVKKNRFLPGSSIDINSDFYKIFEEAGTIKKYS FT KDEIIYFQEDVAENFYLIKSGRVRMFLISPEGTELTIEILRKGKLFGESSCFSYGSRLT FT SVSAATDVELISVSLENLYPYLTKYPELMVQMFHLMSLTMKNLSIQVSNMAFLPAEKKL FT AQLLVRLGAHFKKNKNDKYYIIDYSHEEIAQLIGSCRVTVTKILNSFQEKGMISLGYKK FT IKIIDEKGLKKEYYDYFV" FT misc_feature complement(1459224..1459319) FT /note="Pfam match to entry PF00325 crp, Bacterial FT regulatory proteins, crp family, score 34.3, E-value 3e-07" FT /inference="protein motif:Pfam:PF00325" FT misc_feature complement(1459248..1459313) FT /note="Predicted helix-turn-helix motif with score FT 1352.000, SD 3.79 at aa 187-208, sequence FT YSHEEIAQLIGSCRVTVTKILN" FT misc_feature complement(1459479..1459760) FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 78.3, E-value 1.6e-20" FT /inference="protein motif:Pfam:PF00027" FT CDS 1459952..1461151 FT /transl_table=11 FT /locus_tag="CBO1336" FT /product="probable transporter" FT /db_xref="GOA:A5I1H1" FT /db_xref="InterPro:IPR005829" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:A5I1H1" FT /protein_id="CAL82883.1" FT /translation="METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDS FT YAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILILGVVITAFSTIGYIFSNGIILLVIF FT RVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGRGYN FT EFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILIPALIL FT FLAAVAESTILSFTALYGIELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSI FT GLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPIINVMILNTVSQDKKGVANAIY FT YALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVAAFVIFALNLFYRGSTILKRHYE FT " FT misc_feature order(1459988..1460056,1460084..1460143,1460180..1460248, FT 1460261..1460320,1460354..1460422,1460450..1460518, FT 1460597..1460665,1460693..1460749,1460768..1460836, FT 1460849..1460917,1460951..1461019,1461047..1461115) FT /note="12 probable transmembrane helices predicted for FT CBO1336 by TMHMM2.0 at aa 13-35, 45-64, 77-99, FT 104-123,135-157, 167-189, 216-238, 248-266, 273-295, FT 300-322,334-356 and 366-388" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1459991..1461145 FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -86.2, E-value 0.00041" FT /inference="protein motif:Pfam:PF00083" FT misc_feature 1460144..1460194 FT /note="PS00216 Sugar transport proteins signature 1." FT /inference="protein motif:ProSite:PS00216" FT misc_feature 1460282..1460329 FT /note="PS00012 Phosphopantetheine attachment site." FT /inference="protein motif:ProSite:PS00012" FT CDS 1461454..1462368 FT /transl_table=11 FT /locus_tag="CBO1337" FT /product="putative iron ABC transporter, substrate-binding FT protein" FT /db_xref="GOA:A5I1H2" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:A5I1H2" FT /protein_id="CAL82884.1" FT /translation="MKGLKRRVSIIICIMLAFMLVSCNLKKGENKETQKNIKITDSYGK FT ELAFEKAPERIVSLSPGATETIYALNKENTLVGRSDFDDYPTAVSKIKSVGGVKDPSIE FT KITELKPDLVIGGAHFSKDTVKKLEDLGIKVAVLYGAEDLDGAYKNIMDISTILGVTEK FT GQTIVDGMKKKVESVENKVKSLNKSKIYYMVDFGKADFSAGGDTFIGKMIEKAGGDNIA FT KDTKGWNYSFEKIVENKPEMIILSDKFNTKKNFLTADKYKELPASKANKVYEIDDNMLL FT RQGPRQADGLEALAKIIHPEAFK" FT sig_peptide 1461454..1461541 FT /locus_tag="CBO1337" FT /note="probabilty 0.994, with cleavage site probability FT 0.533 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1461490..1461522 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1461610..1462290 FT /note="Pfam match to entry PF01497 Peripla_BP_2,Periplasmic FT binding protein, score 124.7, E-value 1.8e-34" FT /inference="protein motif:Pfam:PF01497" FT CDS 1462390..1463388 FT /transl_table=11 FT /locus_tag="CBO1338" FT /product="putative iron ABC transporter, permease protein" FT /db_xref="GOA:A5I1H3" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:A5I1H3" FT /protein_id="CAL82885.1" FT /translation="MKKKSLFIGLIIITIVASLVSITIGAASITPFKVIEVILNKFIGN FT INDSILQKIIWDIRMPRIILAALVGIGLSVTGTSFQGIFKNSMADPYVLGISSGAALGA FT TISIVYKLETKGALVTTLCAFIGAILTIFIVYNIARVGNKIPTTTLLLAGIALNFFMSS FT LISMSMILHKEAIDRIVYWTMGSLGNASYKQIYFLSPIVVIITFIFYYNYRALNIMAAG FT EESAYILGIDSEKFKKKMIVLSSIMVAAIVSVSGIIGFVGLIVPHIARLIVGANHREVI FT PFSMVLGALFLIICDALARGIMPPIELPVGAVTSCFGAPYFMYLLWKKKRG" FT sig_peptide 1462390..1462465 FT /locus_tag="CBO1338" FT /note="probabilty 1.000, with cleavage site probability FT 0.765 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1462408..1462476,1462573..1462641,1462660..1462719, FT 1462735..1462803,1462837..1462905,1462963..1463022, FT 1463116..1463184,1463227..1463295,1463314..1463370) FT /note="9 probable transmembrane helices predicted for FT CBO1338 by TMHMM2.0 at aa 7-29, 62-84, 91-110, FT 116-138,150-172, 192-211, 243-265, 280-302 and 309-327" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1462462..1463373 FT /note="Pfam match to entry PF01032 FecCD, FecCD transport FT family, score 347.4, E-value 1.6e-101" FT /inference="protein motif:Pfam:PF01032" FT CDS 1463391..1464152 FT /transl_table=11 FT /locus_tag="CBO1339" FT /product="putative iron ABC transporter, ATP-binding FT protein" FT /db_xref="GOA:A5I1H4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I1H4" FT /protein_id="CAL82886.1" FT /translation="MDFLSLKNISYRNGSTEILKELNIDFQRGQFYVIVGPNGSGKTTL FT LKTIIKNIIPSKGIIELEGKNLKNIKAKHLASRFSYVPQNTNIELEFTCYDLVMMARNH FT KLKTFQSEGKIDEDIVINAMRKMEVLHLKDKPITEISGGEKQRVILARAIAQETSYIIL FT DEPISNLDIKHQILVMEYLKKLREEGKTIITVLHDLNFALNYGDYGILVSKGNVFSQGK FT IENVITPKTIKEVYEVESEIIKKNNKSFVIY" FT misc_feature 1463475..1464035 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 175.0, E-value 1.3e-49" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1463496..1463519 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1463808..1463852 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS complement(1464373..1464708) FT /transl_table=11 FT /locus_tag="CBO1340" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I1H5" FT /protein_id="CAL82887.1" FT /translation="MIKIEDILSGDFSAYPEETQIYMKNYAEKLRNHIKTELINDKADK FT ILKDIDKSKDYFIDTLTEILENGCKGYNTMSTKALLNIYLNVKSEEDFINLIEQVSNEV FT NSIKMHK" FT CDS complement(1464783..1466060) FT /transl_table=11 FT /locus_tag="CBO1341" FT /product="putative iron-sulfur cluster binding protein" FT /db_xref="GOA:A5I1H6" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR013283" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:A5I1H6" FT /protein_id="CAL82888.1" FT /translation="MSHIVGKDAYKSLEERLNRFPQGAPPSETLYKILSMMFTKEEAAM FT VAKLPIKSFNIKTASELWGVSEVKAANILQALASKALILDLECESDGEQKYMMAPPMAG FT FFEFALMRVGTHLDQKVLSELFHQYLNVEDDFSKELFWGTETKLGRAFVQERVLNDENS FT INILDYEKASYIIKNAKHIGVSSCYCRHKAHHLGDDCYAPMETCMSFSTTAYTLIKHNY FT ARKIDASEALDILNMCYDYNLVQCGENVQKQPNFICNCCKCHCEAFVSAKKFGFLVPVN FT TTSYLPNINKDRCVGCGKCTKVCPMEAIKLKETSLENHNSKIAELSEDLCLGCGVCVKN FT CKTNAIKLVRRKESVITPVTTVHRAVLSAIEKGQLQNLIFDNNAHLSHKAMAAILGSIL FT KLSPVKKAMASKQMKSVYLAKLLENT" FT misc_feature complement(1465020..1465091) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 32.2, E-value 1.2e-06" FT /inference="protein motif:Pfam:PF00037" FT misc_feature complement(1465131..1465202) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 39.2, E-value 1e-08" FT /inference="protein motif:Pfam:PF00037" FT misc_feature complement(1465146..1465181) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 1466467..1467312 FT /transl_table=11 FT /locus_tag="CBO1342" FT /product="putative phosphosugar-binding transcriptional FT regulator" FT /db_xref="GOA:A5I1H7" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A5I1H7" FT /protein_id="CAL82889.1" FT /translation="MGVLLRIRENFDSMTKSEKKIAEYIFKSPRDIISDSAQEIAIKTS FT TSPASVIRFTKKVGYNSLNEFKFALVAEEYTKESTELDYIINYNDSIDSIINKLGNKMI FT DTINDTKELVDDEKLLEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQQD FT SHLQLAVSVHITNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIAD FT INLNIPSIEKDLRIGAISSRTSQLFVTDSLFLGIAKENLDKTEKNLINTRNLVEVLKRE FT " FT misc_feature 1466467..1466787 FT /note="Pfam match to entry PF01418 HTH_6, Helix-turn-helix FT domain, rpiR family, score 78.9, E-value 1.1e-20" FT /inference="protein motif:Pfam:PF01418" FT misc_feature 1466833..1467240 FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 101.2, E-value 2.1e-27" FT /inference="protein motif:Pfam:PF01380" FT misc_feature 1467088..1467111 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1467592..1468500 FT /transl_table=11 FT /locus_tag="CBO1343" FT /product="putative phosphosugar binding/isomerase" FT /db_xref="GOA:A5I1H8" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR005486" FT /db_xref="InterPro:IPR005488" FT /db_xref="UniProtKB/Swiss-Prot:A5I1H8" FT /protein_id="CAL82890.1" FT /translation="MTNISLDKLVTESRNENTKNIDRVETLEMLKMINNEDKKVAEAVE FT KELIHIAKAVDKIGEAFLNGGRLIYVGAGTSGRLGVLDASECPPTYGVSYDLVRGIIAG FT GESAMFKAREGAEDSKKLCIKDLKNINFGKNDILAGIAASGRTPYVIGGLEYANGIGAT FT TISVTCNPESEMSKIANISIAPVVGPEAITGSTRMKAGTAQKMVLNMLSTGAMVKTGKV FT YGNLMVDLKATNEKLVERAKRIVMQATGSKREQVEKILKETNFDVKLSIFMIESSLDKI FT KAKEILDKNKGYIVEAIKEIS" FT misc_feature 1467766..1468242 FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 4.4, E-value 0.015" FT /inference="protein motif:Pfam:PF01380" FT misc_feature 1468153..1468206 FT /note="PS01272 Glucokinase regulatory protein family FT signature." FT /inference="protein motif:ProSite:PS01272" FT CDS 1468613..1469968 FT /transl_table=11 FT /locus_tag="CBO1344" FT /product="PTS system, IIbc component" FT /db_xref="GOA:A5I1H9" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:A5I1H9" FT /protein_id="CAL82891.1" FT /translation="MSNVKDIAQSIYDIIGGSSNIVSFTHCMTRLRLVLKDQNNLEMKA FT IKKIDGVIGVVQQQNQLQIILGPGRVNKVTEEFEKLCGIQIEAVTKEVEFGNGSKLREE FT IKEKNATPFKLFLKKLSNIFIPLIPAFIACGLVTAILNIVLKLDPAFAETTIGGLLKIA FT GNAVFWGLNLFVGVNAAKEFGGSPMLGGTMAAIISHPELAKVTLNGQKLLPGRGGIIAV FT LLVVAFSSFLEKKVRKIMPDALDLFMTPLIVILVSTFVSIFALQPAGGFISDAIGNGTK FT AAISGGGAVTGFILGGFFLPLVMTGLHQGLTPIHADLLKTTGLNPLLPILAMAGAGQVG FT AAIAVLLRTKNKRLKKTIISALPVGIMGVGEPLIYGVTLPLGKPFIGACIGGAVGGAVQ FT ALFKVSSTSMGLSGLPLAAITSTPLLFIIGLVAAYIGGFFATLLLGFEDPIE" FT misc_feature 1468634..1468738 FT /note="Pfam match to entry PF00367 FT PTS_EIIB,phosphotransferase system, EIIB, score 44.4, FT E-value 2.7e-10" FT /inference="protein motif:Pfam:PF00367" FT misc_feature 1468670..1468723 FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT /inference="protein motif:ProSite:PS01035" FT misc_feature 1468973..1469788 FT /note="Pfam match to entry PF02378 FT PTS_EIIC,Phosphotransferase system, EIIC, score 157.5, FT E-value 2.4e-44" FT /inference="protein motif:Pfam:PF02378" FT misc_feature order(1468979..1469047,1469075..1469143,1469249..1469308, FT 1469351..1469419,1469456..1469524,1469582..1469650, FT 1469684..1469752,1469795..1469863,1469882..1469950) FT /note="9 probable transmembrane helices predicted for FT CBO1344 by TMHMM2.0 at aa 123-145, 155-177, FT 213-232,247-269, 282-304, 324-346, 358-380, 395-417 and FT 424-446" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 1470101..1470184 FT repeat_region 1470227..1470290 FT /note="possible intergenic repeat 2" FT CDS 1470392..1471468 FT /transl_table=11 FT /locus_tag="CBO1346" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I1I0" FT /db_xref="InterPro:IPR002130" FT /db_xref="InterPro:IPR008589" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:A5I1I0" FT /protein_id="CAL82892.1" FT /translation="MGKGISIFLGMDNSIDKILELIKIAKNNGYDRIFTSLHIPEANYS FT VIVEEFKLVLDMAKKMNMKIIADISPKGFEYLQIKDMDLNKIKSIGIDVLRLDFGFTEE FT QIAKFTNNNLDINIELNASTITKDFLNKLNKYNVNYKNIQACHNYYPRKDTGISESLFL FT KKNSMLKEIGVEVSAFVPSLIGKRGPIYEGLPTIEKHRFMNPYLSAKHLFAMGVDNVFF FT GDAMPSKEEIMEVGMIKEDIIELEVDLEDNSLITCNYLNQDFYTNRVDVAENVIRAAEG FT RLIVNNSVIEPFNTVDRKVGYVTLDNKGYLRYMGELQILLTDLEKDDRVNVIAKVKKDE FT LFLLKYINEGRKFRFKIE" FT misc_feature 1470395..1471465 FT /note="Pfam match to entry PF05913 DUF871, Bacterial FT protein of unknown function (DUF871), score 371.8, E-value FT 7.2e-109" FT /inference="protein motif:Pfam:PF05913" FT CDS 1471800..1472408 FT /transl_table=11 FT /locus_tag="CBO1347" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009467" FT /db_xref="UniProtKB/TrEMBL:A5I1I1" FT /protein_id="CAL82893.1" FT /translation="MVLIKEQNKVKMDVMWKKFNGIGLEHLFLLKDDESIKVNSVILTM FT KEDMPVRILYNIYCDLDWKVKKFDIQIFYDKHKNIILQSDGNGIWTTDTNELVEDLKGC FT IDIDISVTPFTNTIPISRLLLNVGESKEIKVVYVDIYNYSLTPVRQRYTCLNSNLKGYK FT YRYENLNNGFIAEFFVDKEGFVIDYPNLFKRIYNIENQK" FT CDS 1472691..1473332 FT /transl_table=11 FT /locus_tag="CBO1348" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003741" FT /db_xref="InterPro:IPR009501" FT /db_xref="UniProtKB/TrEMBL:A5I1I2" FT /protein_id="CAL82894.1" FT /translation="MDKNVAWYIKKQVERTIKNLNSRNMGGYYINNINQLFQKLKELMP FT EGSTIGVGDSMTLFETGVIDFLRSENFNFLDKYQDRLTSDEKRDIYIKNFSADTFICST FT NAITESGELYNIDGNGSRVAPMIYGPKQVILIVGINKIVKNIEEAEIRVRSYAAPIDAK FT RLNKDTPCTQLGYCVDCKSPNRICNDFVVIRGQFIKGRIKVLILGENLGY" FT CDS 1473447..1473641 FT /transl_table=11 FT /locus_tag="CBO1349" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1I3" FT /protein_id="CAL82895.1" FT /translation="MSQNKNSLNFYIYGFKIKAILRHPLVIYKRHEIFSCFDVLILNKK FT EILIHSYIYLISSNGGDLT" FT repeat_region 1473475..1473514 FT CDS 1473638..1475509 FT /transl_table=11 FT /locus_tag="CBO1350" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR007253" FT /db_xref="UniProtKB/TrEMBL:A5I1I4" FT /protein_id="CAL82896.1" FT /translation="MKKLSTGIAVFLCTILILGQIRIVKNAIFPSGIKHENNRIHLNTG FT NTIRVSGKSSKEIGTKVTDILFPAFNYEGKPNGLIIYKGDNWKDILALMPLVKKYNSTI FT IPFNEKDESSLLDYINKLEPKGIPKLNNAQVVICGDNINTLKNNLERKGIRVTNINYKD FT TNSLLEKVYNSVFSNSEKCYGYIVSDEDPLMTVPVATWIVQNGGIPLYLNNEKKLYSSS FT KKILPNISKIYVIGKKNNVDEEDIKSLKVPVQKVYGYNPENFAINFAKFYDREEGFGWH FT SNRSRDDSNHNFILCSKEEPLMALVGSQLALKGKVGPILWTNKNYLSPLTENYLWRMKP FT NYWVTAAEGPYNSLWVMGNEDILPFSIQSRVDYTQEIQPYKTMGDQAVSGLDGISIIFS FT LISILGAIWVSIHLYLRMKKLSILIKFMWILTVLVLGPLGIWFYVISYINSPWIKINEK FT IVYLRSLWKQTSVATLSGLAFGASSIIVVNYILTYIGSPLISFYARYGGYLLGNPMIIK FT MIISYLIAFLLDLFVFMPTILIEMKSSKYKDAVKESLLLVFISITSISVGMMLSMWWFN FT MSYSPSILREDNILWFGFMFLSAFIGFLTAYIPNWILVRNGKKMGTL" FT sig_peptide 1473638..1473713 FT /locus_tag="CBO1350" FT /note="probabilty 0.930, with cleavage site probability FT 0.540 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1473656..1473709,1474814..1474882,1474901..1474969, FT 1475012..1475080,1475093..1475161,1475189..1475257, FT 1475294..1475362,1475405..1475473) FT /note="8 probable transmembrane helices predicted for FT CBO1350 by TMHMM2.0 at aa 7-24, 393-415, 422-444, FT 459-481,486-508, 518-540, 553-575 and 590-612" FT /inference="protein motif:TMHMM:2.0" FT CDS 1475562..1476800 FT /transl_table=11 FT /locus_tag="CBO1351" FT /product="putative exported protein" FT /db_xref="InterPro:IPR007253" FT /db_xref="UniProtKB/TrEMBL:A5I1I5" FT /protein_id="CAL82897.1" FT /translation="MIINENLNKIYKIVLTIILVISFFLICLLFFYKPNYYKNKVDINN FT KSTIKNENKYQRVTANTVRIEGKDLYETCTSISQIVYPATSKEDRPNAVILVRSDKIED FT AMLAARVSHDPINAPILFTKKNSIPESTLKEIERLNPEGLFVDSNVKVILIGDMGKDIE FT NTLNKKNLKYRHIKGKDIYDLSLNVDNYLAAFRGNHKDVVIIAPIEKPEYSLAQASWNA FT HNGDGFFFVEKNKVPESVKNALKARYGGSYIYILGDKFHISNKVKKELAKYGHVERIPG FT GENIYNQAVSFATYKDVGKNFSCWFSKKNRDFGWGITQPGHNFIFVNPDNWQVAVASSI FT LSHKAKQGPMLLVYKNSIPEKLKDYLYNVKPSYISSQEINNNHGWIIGNSDYISDMNQD FT KIDSLLESERSNR" FT sig_peptide 1475562..1475655 FT /locus_tag="CBO1351" FT /note="probabilty 0.849, with cleavage site probability FT 0.454 between residues 32 and 33" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1475598..1475657 FT /note="1 probable transmembrane helix predicted for CBO1351 FT by TMHMM2.0 at aa 13-32" FT /inference="protein motif:TMHMM:2.0" FT CDS 1476800..1477342 FT /transl_table=11 FT /locus_tag="CBO1352" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1I6" FT /protein_id="CAL82898.1" FT /translation="MPSTDTEFQEQMQQQMKQRLENLPRFTYKVTRFFKNKSDLQQAID FT DLNNGGIPNLSSKKLTDNYIEEIYEMCFLFKVEGRKILKGFIYGALIGIILGILQGIGF FT LAFPILNPISAGGMIVSTLIISLIISVICGGFTAIVLLFRPIKKVDSSFYMLTVYSDYE FT NKQNIEDTLNKHINFEI" FT misc_feature order(1477052..1477120,1477163..1477231) FT /note="2 probable transmembrane helices predicted for FT CBO1352 by TMHMM2.0 at aa 85-107 and 122-144" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1477512..1477784) FT /transl_table=11 FT /locus_tag="CBO1353" FT /product="hypothetical protein" FT /note="No significant database matches. High content of Gln FT residues" FT /db_xref="InterPro:IPR012452" FT /db_xref="UniProtKB/TrEMBL:A5I1I7" FT /protein_id="CAL82899.1" FT /translation="MTVINKLNQTMEALKGTESNCRTFSMDTDDPNAKQMFNQIAENMK FT MCENMLQSRINFVMSEEPQYQPEEQQKQIQQQIQMQQQQQDEQNQ" FT CDS 1478288..1480006 FT /transl_table=11 FT /locus_tag="CBO1354" FT /product="methyl-accepting chemotaxis protein" FT /db_xref="GOA:A5I1I8" FT /db_xref="InterPro:IPR000727" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR004090" FT /db_xref="InterPro:IPR024478" FT /db_xref="UniProtKB/TrEMBL:A5I1I8" FT /protein_id="CAL82900.1" FT /translation="MENLKVKNKILFMSSIMLIFTIIVGITGYYFNAKSNKAIKKLYED FT NLISVKVLNDARAQARGAEADVARIVILSKNVKTQEKLKKDIESRVEKFNKDIEEFKRI FT GLNSEKEKELLDYMEKNLNEFRQRREEVFKVAKEGKMDLAAKKFSELNEVNENYQKSLI FT ELSDFNVKEAEEFKIQNDRANAFSNRFITIILSLSIVIALVTTNIISKSIINPLKESVE FT YLDKLSTGNFTEKVSDKLLKRKDEVGQLANAVSKMYGSIRNIINDVLNEMSNSSNVVEN FT IDENINDLNKRIQEASTATEELSASMEETGASAEEMSATSEEIEKAVEDIALKAEEGAS FT SAGKILTKVEELKSDAIKSQKNANKVKANIDSATKDAIEKSKTIEEINVLSEAILEITS FT QTNLLALNAAIEAARAGESGKGFAVVAEEIRKLAEQSSQTVVRIQDTTKEVLKAVEDLK FT KNSSNALNFIDSYIVKAHQDTVEVFDSYSKDATYYNDISNDLSATSEELLASIKNIVEV FT INNVADAANEGAKDTTNIAQNNEKIVIASEDIVKSTDLLKNSSQKLINSVTKFKI" FT sig_peptide 1478288..1478384 FT /locus_tag="CBO1354" FT /note="probabilty 0.955, with cleavage site probability FT 0.336 between residues 33 and 34" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1478315..1478383,1478843..1478911) FT /note="2 probable transmembrane helices predicted for FT CBO1354 by TMHMM2.0 at aa 10-32 and 186-208" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1478858..1479076 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain,score FT 34.9, E-value 2e-07" FT /inference="protein motif:Pfam:PF00672" FT misc_feature 1479137..1480003 FT /note="Pfam match to entry PF00015 FT MCPsignal,Methyl-accepting chemotaxis protein (MCP) FT signaling domain, score 73.1, E-value 6.3e-19" FT /inference="protein motif:Pfam:PF00015" FT repeat_region complement(1480006..1480191) FT /note="intergenic repeat 1" FT repeat_region 1480101..1480159 FT CDS 1480464..1482053 FT /transl_table=11 FT /locus_tag="CBO1355" FT /product="ABC transporter, substrate-binding lipoprotein" FT /db_xref="GOA:A5I1I9" FT /db_xref="InterPro:IPR000914" FT /db_xref="InterPro:IPR023765" FT /db_xref="UniProtKB/TrEMBL:A5I1I9" FT /protein_id="CAL82901.1" FT /translation="MKKMKSIKKATAMLLIALFTLPIIFTGCSNKKEQSEKDDKKGKTV FT VYGAEFEDEKLNPVLAPAYANDLIFRGLMRFDKDNKPQCDIAESYKKSTDGLTYDFKIK FT KGVKFHDGKELKAEDVVFTIKSIQDPKVNTEMKPEFEEVKDIKAEGDYNVKVTLAKPFP FT ALLDKLTIGIVPKHALEGKDLNNAEFNQKPIGAGPFKFVKWEKGNNITLSKFEDYYGKD FT KTGNVEKFIFKFIPDYNVRAMQLETGEIDLAYVEPSQVAKLEKLEKIKIYNENTADYRC FT FMFNMRKELWKDVNVRKAFNYAVDRKGMVDGILKGFGVEAYSPLQKNKFNNANVEKYSY FT NLEKANELLDKAGWKKGQDGIREKDGKKFEFTLTAPSTDEVRVKIANYLASQFKKIGVT FT VKVAALDWNAIKIDECEAFVLGWGSPYDADDHTYKLFHSSQIKNGNNFGAYSNPKVDKL FT LEEGRTTEDEEKRKEIYGKLQEELANDPPYNFEIYVNAIYAVNKKVTGIKEKILGHHGA FT GFIWNAEEWKVQ" FT sig_peptide 1480464..1480554 FT /locus_tag="CBO1355" FT /note="probabilty 1.000, with cleavage site probability FT 0.423 between residues 31 and 32" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1480515..1480547 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1480518..1482029 FT /note="Pfam match to entry PF00496 SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5, score FT 355.2, E-value 7.1e-104" FT /inference="protein motif:Pfam:PF00496" FT misc_feature 1480722..1480790 FT /note="PS01040 Bacterial extracellular solute-binding FT proteins, family 5 signature." FT /inference="protein motif:ProSite:PS01040" FT misc_feature 1481907..1481927 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 1482050..1483006 FT /transl_table=11 FT /locus_tag="CBO1356" FT /product="ABC transporter, permease protein" FT /db_xref="GOA:A5I1J0" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I1J0" FT /protein_id="CAL82902.1" FT /translation="MTSRYILKRLGQGILIIFFLSIISFLIINAAPGDPAVAIYGGKAD FT RLTNSERARIVKNYGLDRPVMDRYIKWSGQMIKGDMGISYIEGRSVSEILKEKIPNTMV FT LFINSILLISLISMILGLKAGFNEGSIWDKLLSTLSIVFYSIPPFWLALIFILVFSVYT FT GWLPSSGNMSIGGEGSVLDVLKHAILPIAVIVITHIGAYSRFIQEKVKEEDKSYYAMVA FT RANGVLEKKIRKGITKNAVVPFINYLGITIPTFFSGSVMIETVFSWPGLGMLTVKAANS FT RDYPLLMGAIFITGVLVVLCMIVTDIIEIIVNPHLRK" FT misc_feature order(1482080..1482148,1482359..1482427,1482464..1482532, FT 1482608..1482667,1482767..1482835,1482917..1482985) FT /note="6 probable transmembrane helices predicted for FT CBO1356 by TMHMM2.0 at aa 20-42, 113-135, 148-170,196-215, FT 249-271 and 299-321" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1482344..1483003 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 128.5, E-value 1.3e-35" FT /inference="protein motif:Pfam:PF00528" FT CDS 1483015..1483815 FT /transl_table=11 FT /locus_tag="CBO1357" FT /product="ABC transporter, permease protein" FT /db_xref="GOA:A5I1J1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I1J1" FT /protein_id="CAL82903.1" FT /translation="MNKKSYKIWIIVFSIIILSSVFAPIITKFNPYEVELTKVLIKPNK FT IHIMGTDSMGRDVFSRILYGGRVSLSVALLSVLISTTIGTLYGVISGYFGGKIDSVMMR FT ILDTFLAIPTLVIMLALQSIIRGGITSMIIIMGLTGWLQTARIVRSQVMSIKNKNYVKA FT ARVLGTPIYKIMINHLLRNSLPAVLVISVLNCAQAVFTEVSMSFLGIGVPEGMPSWGSM FT LNCAQNDILSGAWWIAFYPGIFTVISMLSINFIGEGIKKKLVAY" FT sig_peptide 1483015..1483081 FT /locus_tag="CBO1357" FT /note="probabilty 0.861, with cleavage site probability FT 0.477 between residues 23 and 24" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1483027..1483095,1483231..1483299,1483336..1483389, FT 1483399..1483458,1483549..1483617,1483714..1483782) FT /note="6 probable transmembrane helices predicted for FT CBO1357 by TMHMM2.0 at aa 5-27, 73-95, 108-125, FT 129-148,179-201 and 234-256" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1483210..1483812 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 126.0, E-value 7.1e-35" FT /inference="protein motif:Pfam:PF00528" FT CDS 1483914..1484708 FT /transl_table=11 FT /locus_tag="CBO1358" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I1J2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I1J2" FT /protein_id="CAL82904.1" FT /translation="MNILEVKGLRIEEEKNKKILVGNTNFEVEKGKITCIVGESGSGKT FT ITAMSIIGMLPQGVRVIEGEILFNGKNTFNFSKEKLRDFRGKKIFSIFQNSINCFNPSV FT IMETQIYNMICSHYSIDKENFRNKLINIMKNINLKNPEIILKQYPFQLSGGMLQRMMIA FT SAILMEPDIIIADEPTTALDLTSQKDILNQLKMIKEKLNTTILMITHDFGVVAEIADNV FT IIMQNGNIIEKGNVYNIFDNPQENYTKTLINATFKREVTYVC" FT misc_feature 1484004..1484597 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 162.1, E-value 1e-45" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1484025..1484048 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1484367..1484411 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1484702..1485514 FT /transl_table=11 FT /locus_tag="CBO1359" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I1J3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I1J3" FT /protein_id="CAL82905.1" FT /translation="MLEVKNVVKSYNTKLRLFTKNKLDFRAIDNVSFKLKEGEAIGIVG FT ESGCGKSTLGRLILRLENTTEGSIKYKGKDIWNFKGKELKIFRKQCQIIFQDTYCSLNP FT NIKIIDSLMEPLDNYFIQLSREEKINKIENIIGFAKLDKDILEKYPSSISGGERQRINI FT CRALLLEPKLLVCDEIISSLDVCTQVSIMSMIKELREKSNTAILFISHDISVVDYLCDK FT IIVMESGRIIETIENKKLGLYSYKKEYTEKLLSSVPINHPSKRVNTIY" FT misc_feature 1484813..1485388 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 169.9, E-value 4.4e-48" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1484834..1484857 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1485158..1485202 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1485958..1486470 FT /transl_table=11 FT /locus_tag="CBO1360" FT /product="putative exported protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1J4" FT /protein_id="CAL82906.1" FT /translation="MTKGIRLLILFVLVSIIVVYSCTSVIMDDKKESEKVFKEYINLLY FT TVKPKSESNRNMTLQQVHTENIFQDVMTENAYNSLWKDQIPLVLSLIVNRNNYDIKVNN FT INIENYHKNKDGTTTYTYNVHLNIFSPLDKRHREEKLRGRATLKKIKFKWKIVKDKQFN FT LEKILLK" FT sig_peptide 1485958..1486045 FT /locus_tag="CBO1360" FT /note="probabilty 0.739, with cleavage site probability FT 0.402 between residues 30 and 31" FT /inference="protein motif:SignalP:2.0" FT CDS complement(1486763..1487551) FT /transl_table=11 FT /locus_tag="CBO1361" FT /product="putative ABC transporter, permease protein" FT /db_xref="GOA:A5I1J5" FT /db_xref="InterPro:IPR001626" FT /db_xref="UniProtKB/TrEMBL:A5I1J5" FT /protein_id="CAL82907.1" FT /translation="MLSYTFMRTALIISVFISILCPSIGIYLVLRRYSMIGDTLAHSSL FT AGIAIGLSLGQNPILSAFIFTSIAGVFIEFLRDYYKRYAELILSIVLSLSVGIAITLVS FT SGRASGNINSFLFGSILTVSKGELLTVFILSIISCLTLILLHSELLYIAFDEEGAKIAN FT VRVKLINYIFSILVAATISVSIRIVGVLVLSSLIALPVATALQFKRGFKNTLFLSILIS FT IFDVISALFLSYYLDCAPGGITALISVFILLIVMVFKKNK" FT misc_feature complement(1486775..1487545) FT /note="Pfam match to entry PF00950 ABC-3, ABC 3 transport FT family, score 215.8, E-value 6.6e-62" FT /inference="protein motif:Pfam:PF00950" FT misc_feature complement(order(1486778..1486831,1486844..1486912, FT 1486931..1486999,1487009..1487068,1487102..1487170, FT 1487228..1487296,1487333..1487401,1487459..1487527)) FT /note="8 probable transmembrane helices predicted for FT CBO1361 by TMHMM2.0 at aa 9-31, 51-73, 86-108, FT 128-150,162-181, 185-207, 214-236 and 241-258" FT /inference="protein motif:TMHMM:2.0" FT CDS complement(1487551..1488204) FT /transl_table=11 FT /locus_tag="CBO1362" FT /product="putative ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I1J6" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I1J6" FT /protein_id="CAL82908.1" FT /translation="MIEINNLCFSYTKKKPYILENINLNIKKGQYISILGSNGSGKSTL FT LKLILGFLSPTLGDINLKNSKIGYVPQKYENFNSDFPITVEEVLKCHKKVLKIKDSTAI FT DRALNIVKMTKYRHSLIGNLSGGQRQKIFIARALMGEPELLILDEPSTGIDVNSQNEIY FT KIISHLNNCHNITVLSVEHNISAALSNSSHLFKIKDGVGKLYTKEQYIKLKEVM" FT misc_feature complement(1487605..1488120) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 152.8, E-value 6.3e-43" FT /inference="protein motif:Pfam:PF00005" FT misc_feature complement(1487791..1487835) FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1488076..1488099) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1488425..1489363 FT /transl_table=11 FT /locus_tag="CBO1363" FT /product="putative ABC transporter, substrate-binding FT lipoprotein" FT /db_xref="GOA:A5I1J7" FT /db_xref="InterPro:IPR006127" FT /db_xref="InterPro:IPR006128" FT /db_xref="InterPro:IPR006129" FT /db_xref="UniProtKB/TrEMBL:A5I1J7" FT /protein_id="CAL82909.1" FT /translation="MKKILSFILILSNIIFFTACSAQNKESFSSKDEKIKVAVSFNPLK FT EYVKAIGKDKVEIKSIIPEGSEPHDFEPKIRDMESINNANIFVYNGFGMEAWVDKTLNN FT IDNKGVVVVEASKNVTPLKNKESEEEHDKGHEEEHEHSHGQYDPHTWLSIKAAVKQSEV FT IKDALIKVDPKNKNYYESNYKDFKESLEKLYSEYKKKFESVKGNHFVTGHAAFGYLCRD FT FNLEQNSVENVFAEGEPTTKKMKELIDYCKKNNIKTVFLEENVSEEVSKTLAKEVGAKV FT EKIYTLTNSVENKGYIEVMQYNLEKIYESLK" FT sig_peptide 1488425..1488485 FT /locus_tag="CBO1363" FT /note="probabilty 0.991, with cleavage site probability FT 0.308 between residues 21 and 22" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1488446..1489360 FT /note="Pfam match to entry PF01297 SBP_bac_9, Periplasmic FT solute binding protein family, score 350.6, E-value FT 1.7e-102" FT /inference="protein motif:Pfam:PF01297" FT misc_feature 1488452..1488484 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1489477..1489968) FT /transl_table=11 FT /locus_tag="CBO1364" FT /product="putative membrane protein" FT /note="limited similarity to the database matches FT mentioned" FT /db_xref="UniProtKB/TrEMBL:A5I1J8" FT /protein_id="CAL82910.1" FT /translation="MKKYSDIKLKNLKSKIISGVMWLETLLAIFMIASVLLSSKDLISF FT IVQIFTLDAIPSYDMFQKFLSHLLLLVIALELALMLVKHTPNSVVEVMLYAIARKMLVY FT GSSALEIFLGVLSLAGIFFIKKYLFSERDKKLEEKESFVQELSVDIIKKTNVISNKTTE FT " FT misc_feature complement(order(1489597..1489665,1489723..1489779, FT 1489855..1489923)) FT /note="3 probable transmembrane helices predicted for FT CBO1364 by TMHMM2.0 at aa 16-38, 64-82 and 102-124" FT /inference="protein motif:TMHMM:2.0" FT sig_peptide complement(1489848..1489968) FT /locus_tag="CBO1364" FT /note="probabilty 0.774, with cleavage site probability FT 0.272 between residues 39 and 40" FT /inference="protein motif:SignalP:2.0" FT repeat_region 1490303..1490496 FT /note="intergenic repeat 1" FT CDS 1490571..1492337 FT /transl_table=11 FT /locus_tag="CBO1365" FT /product="putative helicase" FT /db_xref="GOA:A5I1J9" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR022192" FT /db_xref="UniProtKB/TrEMBL:A5I1J9" FT /protein_id="CAL82911.1" FT /translation="MKKASIDRNFRKIKNSYSQTEDIVQHSKINSLWEQEASIRKKLKK FT LESMKDENIRDFKEVYNNYSHLLDYISKKLVKDYNIKHNTNFDFHEIIKGNRKNYLKSG FT IMSVLITRHIPTMIFKEFDRIFPKNPKDEYKEVRHMNRKFYLHLGETNTGKTYNSMERL FT KESKKGIYLSPLRILALENFEKLNKEGIMCNLITGEEEIKKEKAQHVCCTIEKLDINEE FT YDVAIIDEIQMIDDDQRGSAWTRAILALRCKEIHVCGALNTKELIINIIEDCGDEYELK FT EYFRNIPLKIEEEAFKLKDIKKGDALVTFSKKKVLQLADYYGDLGIKTSVIYGNLPPEV FT RKKQYEQFMSGDTNILITTDAIGMGVNLPIRRIVFMDIRKFDGNDMRYLTSQEIKQIGG FT RAGRLGIYDIGYLASYGNTQNFVKEMIEVYDRKIYEAVIEPSEAILDVRSLPLREKLAL FT WSTREEKSLLYRKMDIGEKILVLDSIKNYKLPEKYQWQLLKVPFDVTNINIMNAFLKYV FT NEIFIGNFKSISKPRLNSKDLYDLELYYQKLNLYYSLSKNFNLDFDESWVYDERTKLSI FT EINKVLRKRFSF" FT misc_feature 1491015..1491038 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1491531..1491785 FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 65.7, E-value 1.1e-16" FT /inference="protein motif:Pfam:PF00271" FT misc_feature 1491945..1491971 FT /note="PS00037 Myb DNA-binding domain repeat signature 1." FT /inference="protein motif:ProSite:PS00037" FT CDS 1492472..1493020 FT /transl_table=11 FT /locus_tag="CBO1366" FT /product="putative signaling protein" FT /db_xref="GOA:A5I1K0" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="UniProtKB/TrEMBL:A5I1K0" FT /protein_id="CAL82912.1" FT /translation="MSYEYMTREQLIVELKKKDKIIENIVRCASIDSLTSVLNRKRGLE FT DLYREIELAKINKEKLTIGFADVNNLKCINDNYGHITGDYVLITLCNIIKDNIRKSDFI FT FRYGGDEFIIVLPKTNIKESSIVWNRISDKIKKVSKNFKYEVGMSCGFVEYDEYYNESL FT KELIKMADFKMYESKSKIG" FT misc_feature 1492544..1493014 FT /note="Pfam match to entry PF00990 GGDEF, GGDEF FT domain,score 85.3, E-value 1.3e-22" FT /inference="protein motif:Pfam:PF00990" FT CDS 1493954..1494961 FT /transl_table=11 FT /locus_tag="CBO1368" FT /product="putative ABC transporter, substrate-binding FT lipoprotein" FT /db_xref="UniProtKB/TrEMBL:A5I1K1" FT /protein_id="CAL82913.1" FT /translation="MKKRIGILLMAFLLIFSALFVVGCSKKEEKKESTNTTQESNKKEK FT IKIATLKGPTGMGIVKLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLY FT NKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILKKNG FT LDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEK FT VSGEGKLTMGALVFKKDFIDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSK FT AKIAQMAIPKCNIVFMDSKDYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK" FT sig_peptide 1493954..1494032 FT /locus_tag="CBO1368" FT /note="probabilty 1.000, with cleavage site probability FT 0.418 between residues 27 and 28" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1493966..1494019 FT /note="1 probable transmembrane helix predicted for CBO1368 FT by TMHMM2.0 at aa 5-22" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1493993..1494025 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1494933..1495694 FT /transl_table=11 FT /locus_tag="CBO1369" FT /product="ABC transporter, permease protein" FT /db_xref="GOA:A5I1K2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:A5I1K2" FT /protein_id="CAL82914.1" FT /translation="MKISIIRKNKIISKLVRRTLIIIFWAFIWELSSLFINNEILLPSP FT KKVFETLIILGIKRYFWLSVFKSIVRVVIGILISIVLGISLGIIAGINVFMEELLEPLV FT VTIKATPVMSIIIIALVWLKSSSVAIFTSILMCFPIIYTNVLSGIKSVDKKLVEMANLY FT EVKNKYILINIYLPSTKPYIISGILMCLGIGWKVSVASEVLSTPRYSIGLNLLNAKATL FT ATEELFAWTIVVVLLSLIFEKIFRYYIKKVF" FT misc_feature order(1494990..1495058,1495137..1495205,1495242..1495301, FT 1495311..1495379,1495437..1495505,1495611..1495679) FT /note="6 probable transmembrane helices predicted for FT CBO1369 by TMHMM2.0 at aa 31-53, 80-102, 115-134, FT 138-160,180-202 and 238-260" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1495113..1495691 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 50.9, E-value 3e-12" FT /inference="protein motif:Pfam:PF00528" FT CDS 1495835..1496434 FT /transl_table=11 FT /locus_tag="CBO1370" FT /product="ABC transporter, ATP-binding protein" FT /note="this CDS is shorter at the C-terminus relative to FT most database matches" FT /db_xref="GOA:A5I1K3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I1K3" FT /protein_id="CAL82915.1" FT /translation="MQFINACKAYGDKIILKDLNLNFEKNKITALLAPSGYGKTTLLNI FT IAGLEFLDSGSFIMEAQSISYMFQEDRLLPWLTVYDNIAFVLKSNTFKCEIENIIDKYL FT DLVNLKEYKDYTLDKLSGGMKRRVALARAFAYKSEVLIMDEPFKGIDLTLKKGIISGFL FT KLWEKDKRTVIVVTHDINEARILAHNIYFLEEYNKL" FT misc_feature 1495910..1496422 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 133.8, E-value 3.2e-37" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1495931..1495954 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1496192..1496236 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1496713..1497186 FT /transl_table=11 FT /locus_tag="CBO1372" FT /product="putative ferric uptake regulatory protein" FT /db_xref="GOA:A5I1K4" FT /db_xref="InterPro:IPR002481" FT /db_xref="UniProtKB/TrEMBL:A5I1K4" FT /protein_id="CAL82916.1" FT /translation="MSTQLDYFKNLIEEKGYKFTFQKKIILKTLMESSIHLNVEEIYNK FT IKKNNIGIATVYRNLKVFKKLGIVKELNINAVNYYEMKLFSRKPLHTHFKCLKCNSIID FT IDNNKLDLEYLKLNRSIEHSEDLEIRDANILFLGLCSRCKEEEKCQDQQSLEE" FT misc_feature 1496752..1497102 FT /note="Pfam match to entry PF01475 FUR, Ferric uptake FT regulator family, score 80.4, E-value 3.8e-21" FT /inference="protein motif:Pfam:PF01475" FT CDS 1497156..1497629 FT /transl_table=11 FT /locus_tag="CBO1373" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002852" FT /db_xref="UniProtKB/Swiss-Prot:A5I1K5" FT /protein_id="CAL82917.1" FT /translation="MPRPTKFRRVEFFPENNYFVPWGKPKCEIHEVVLKVEELEAMRLK FT DIEELNQEQCAEKMEISRQTFQNIIDSARKKVAIALTEGKAIKISGGHYTTKLCKLKCI FT DCEEIYEINYEQDRHLCPNCGSEKVICNKKADFCRRWCKGQNRKEQYEESKNK" FT misc_feature 1497156..1497446 FT /note="Pfam match to entry PF02001 DUF134, Protein of FT unknown function DUF134, score 90.6, E-value 3.3e-24" FT /inference="protein motif:Pfam:PF02001" FT misc_feature 1497303..1497368 FT /note="Predicted helix-turn-helix motif with score FT 1595.000, SD 4.62 at aa 50-71, sequence FT LNQEQCAEKMEISRQTFQNIID" FT repeat_region 1497637..1497668 FT /rpt_family="CB.262" FT /rpt_type=INVERTED FT /rpt_unit_seq="aattaagcaccatttataaatggtgcttaatt" FT /inference="ab initio prediction:REPuter" FT CDS 1497756..1499027 FT /transl_table=11 FT /locus_tag="CBO1374" FT /product="putative gamma-D-glutamyl-L-diamino acid FT endopeptidase" FT /EC_number="3.4.19.11" FT /db_xref="GOA:A5I1K6" FT /db_xref="InterPro:IPR000834" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:A5I1K6" FT /protein_id="CAL82918.1" FT /translation="MRILKKGDRGSDVRKIQAVLQKIGYDVGPIDGIFGSNTEEAVKRF FT QLNNGLVVDGIIGPKTYELLNKFILGYNTYTIKPGDTLYNIAKRHYTTVDKIMIANPNI FT DPNNLIIGSQIIVPIGIDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLGKNL FT YYIKLGDGSNEVFYNGAHHALEWITALLLMKFIEDFSRAYSEGSKIKGYNIKDIWNRSS FT IYIMPMVNPDGVDLVINGLQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNAS FT WYESKIAEESYGVYGPGPTRYGGPYPESEPESRSVADFTRNHNFRLILAYHSQGEVIYW FT TYRDIIPPGAREIGELFSKVSGYELSETVGIASYAGYKDWFIAQFKRPGFTIEVGKGTN FT PLPLSQFDKIYRDNIEILLLAPIV" FT misc_feature 1497780..1497962 FT /note="Pfam match to entry PF01471 PG_binding_1, Putative FT peptidoglycan binding domain, score 74.4, E-value 2.5e-19" FT /inference="protein motif:Pfam:PF01471" FT misc_feature 1497978..1498109 FT /note="Pfam match to entry PF01476 LysM, LysM domain,score FT 60.6, E-value 3.5e-15" FT /inference="protein motif:Pfam:PF01476" FT misc_feature 1498143..1498790 FT /note="Pfam match to entry PF00246 Zn_carbOpept, Zinc FT carboxypeptidase, score 53.5, E-value 4.9e-13" FT /inference="protein motif:Pfam:PF00246" FT CDS 1499317..1500357 FT /transl_table=11 FT /locus_tag="CBO1376" FT /product="metallo-beta-lactamase superfamilyl protein" FT /db_xref="GOA:A5I1K7" FT /db_xref="InterPro:IPR013471" FT /db_xref="UniProtKB/TrEMBL:A5I1K7" FT /protein_id="CAL82919.1" FT /translation="MVDLALLGCGGGMPIPDRFLSSLLMNYRGRKILIDCGEGTQVSMK FT ILGWGFKSIDIICITHMHGDHVVGLPGLLATIGNSGREEPLTIIGPEGIENVITGLRTI FT VPYLPYDIVIIENPKESLNVNVLKNGMEVLKEYGSGNLIKNNSLKDCIKNGEDSINQYE FT NYNDKLRYDIEISTLELDHSCPCIGYGFYINRKPKFNLEKAEGNNVPKFLWSRLQKGES FT LVYEGIKYNSSMVMGRGRKGIKLNYVTDTRPIDPIIDFIKNSDLFICEGTYGQDEDLHK FT AIKNKHMTFREGAKLANKGKVSQLILTHFSPAMIDPESFKQNAMEVFPDTLIGKDRLIK FT TLSFKE" FT misc_feature 1499371..1500243 FT /note="Pfam match to entry PF00753 FT lactamase_B,Metallo-beta-lactamase superfamily, score 39.3, FT E-value 9.2e-09" FT /inference="protein motif:Pfam:PF00753" FT CDS 1500703..1502022 FT /transl_table=11 FT /locus_tag="CBO1377" FT /product="putative amino acid permease" FT /db_xref="GOA:A5I1K8" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:A5I1K8" FT /protein_id="CAL82920.1" FT /translation="MKDAKEENLQKNLGLFDAIAIVIGMVIGSGIFFKPAIVFKNAGSP FT MLGILAWLVGGLITIASGLTIAEIAAAIPKTGGIFVYIKELYGEKFAFLIGWVQSIVYI FT PGSAAALSIILSIQITSFIPLTAIEQKVLAIVFIIFIMILNIISTKLVSKMQGIISIAK FT LIPIIAIIALGFIKGTAKGDILNISSSSTVSGFGAALLGTLWAYDGWISVGNMAGELKN FT PKKDLPRSIIIGLGTTIVVYVLINLALINIMPMSAIITSEKPASDAAVVLLGSTGAKII FT SAGILISIFGALNGYLMTGVRIPLAMSQDRSIPFSKYFSKVHEKSGTPVNAFIFETVLA FT CLYVLSGSFNVLTDLVMFVLWLFFTMAVAGIFVLRTKFKHLDRPYKVPLYPLVPLIGII FT GSSYIIISTLITNTFYALCGIGITLLGLPVYSYIKKQNKV" FT misc_feature order(1500739..1500801,1500844..1500912,1500973..1501041, FT 1501099..1501158,1501171..1501230,1501288..1501356, FT 1501393..1501461,1501504..1501572,1501690..1501758, FT 1501771..1501824,1501861..1501920,1501933..1502001) FT /note="12 probable transmembrane helices predicted for FT CBO1377 by TMHMM2.0 at aa 13-33, 48-70, 91-113, FT 133-152,157-176, 196-218, 231-253, 268-290, 330-352, FT 357-374,387-406 and 411-433" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1500751..1502019 FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score 160.6, E-value 2.7e-45" FT /inference="protein motif:Pfam:PF00324" FT CDS 1502167..1502544 FT /transl_table=11 FT /locus_tag="CBO1378" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR012544" FT /db_xref="InterPro:IPR023363" FT /db_xref="UniProtKB/TrEMBL:A5I1K9" FT /protein_id="CAL82921.1" FT /translation="MGLFNGLMGNASEVNIMEVEKEYSNVLAENERVEKAYKLIRDMFI FT FTNKRLILVDKQGMTARKTEYHSIPYKAITHFSIETAGNFDLDAELKIWISGTQLPIEK FT QFNKSLNIYELQSVLANYVLK" FT CDS 1502557..1503714 FT /transl_table=11 FT /locus_tag="CBO1379" FT /product="two-component sensor histidine kinase" FT /db_xref="GOA:A5I1L0" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR011712" FT /db_xref="UniProtKB/TrEMBL:A5I1L0" FT /protein_id="CAL82922.1" FT /translation="MERKKLLIIFRYIAILFLIFGIASFEKENITTNAVILILLFIINN FT QIRFFVLNKNKNLVLISIILECILAYIGYINYSGILFFYFFTDILDSALFLKDGISYLA FT CSIILIIVVFLGWNLNLSEILSIVTSFIMLFILATYIKEENSGKLRAQKLYDKLRISEE FT KLKKANKDLESYANSIEELTVLRERNRISREIHDSVGHSLSTMIIQLGAIEKIAEKDKK FT LTSEMARNLGEFAKNSLAEVRCAVRALKPREFEKYEGILAVEELTKNFEKLTGVKVKLG FT FSKEKWTLNSDQCFVLYRVVQEFLSNSLKHGKATRVDIFMGFNEENLIITLKDNGQGAD FT KIEKGVGLKSIWERVNELGGTVAYNSKKEEGFLLKVVLYPKINET" FT sig_peptide 1502557..1502632 FT /locus_tag="CBO1379" FT /note="probabilty 0.855, with cleavage site probability FT 0.536 between residues 26 and 27" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1502575..1502631,1502641..1502709,1502728..1502796, FT 1502854..1502907,1502926..1502979) FT /note="5 probable transmembrane helices predicted for FT CBO1379 by TMHMM2.0 at aa 7-25, 29-51, 58-80, 100-117 and FT 124-141" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1503430..1503699 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 42.5,E-value 1e-09" FT /inference="protein motif:Pfam:PF02518" FT repeat_region complement(1503726..1503859) FT /note="intergenic repeat 1" FT CDS 1503897..1504550 FT /transl_table=11 FT /locus_tag="CBO1380" FT /product="two-component response regulator" FT /db_xref="GOA:A5I1L1" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:A5I1L1" FT /protein_id="CAL82923.1" FT /translation="MNKTNIIVADDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLC FT KEKDVQVVLMDIRMPNCDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYL FT LKDSSNELIYEGIKACVKGNVVVHPDVANNIILNTTYEKELNDDDISLRYNLTEREINI FT IRQIANGLSNKEIAEKIYLSEGTIKNNISTILSKLDLRDRTQIAIFAFKNNIVN" FT misc_feature 1503906..1504271 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 130.2, E-value 3.8e-36" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 1504353..1504547 FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 60.8, E-value FT 3e-15" FT /inference="protein motif:Pfam:PF00196" FT misc_feature 1504407..1504472 FT /note="Predicted helix-turn-helix motif with score FT 1497.000, SD 4.29 at aa 171-192, sequence FT LSNKEIAEKIYLSEGTIKNNIS" FT repeat_region complement(1504554..1504739) FT /note="intergenic repeat 1" FT CDS 1504901..1505839 FT /transl_table=11 FT /locus_tag="CBO1381" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I1L2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I1L2" FT /protein_id="CAL82924.1" FT /translation="MSIIEANNVTKRFNDKLVLDNINFKIKEGEVFGLIGPNGAGKSTL FT INIMTSILKSTSGDIKIGGYSITKEALKAKEYIGLVPQEIALIETVSAVDNLEFFGSLY FT GLKGKLLKERIDEALEVIGLKEKRREKVKKFSGGMKRRLNIAAAIMHHPKILIMDEPTV FT GIDPQSRNHIFEFTRKINREEKTTVIYTSHYMEEVEMLCNNLFIMDLGKEVAYGNKNYI FT KSMLGDKNRVILKLENYTGELLLNLRSLGGVIECEEEERFIKLLVHENDFELNSLLKVL FT ENENIKIKGINFEEPTLEEVFLSLTGKKLRD" FT misc_feature 1504985..1505533 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 200.0, E-value 3.8e-57" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1505006..1505029 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1505303..1505347 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 1505945..1507123 FT /transl_table=11 FT /locus_tag="CBO1382" FT /product="putative ABC transporter, permease protein" FT /db_xref="UniProtKB/TrEMBL:A5I1L3" FT /protein_id="CAL82925.1" FT /translation="MRLKAFIKLTLKSVFRELPVMIFTFAIFPIVISLLYGYFQKDMFN FT PKNEIDRIAIYVEDKDNSKLSNEFIKFLGSNELKKFIDIKKNKEKAIEEVVIPKGYEKS FT IIEDKEITIKINEREKDKEVSSKILKDLIDNYNKEVKNNLTIGNNINKMDISKERKDLL FT VKEISKDITKIYKKDAIRNSIVKSTRNLTSFEYYSVSILSFMFIVTIITLCNGYYEEKR FT KGIFQRTLSTSISKVQYFNYSLVSWYIFAVLFNSIYVLSYRLLGLSFKGNIGLLLLIVL FT AKSLLEVAISSVVIAFFKEQKMAAIFLNTVIIISVSLGGVFYPLEKVINSFNKIFRVIS FT DFAPNVLIIKTYKSFLIYNSFEAIKYYLITFILISMVLYSISLLKINMKWGD" FT misc_feature order(1506002..1506061,1506530..1506598,1506659..1506727, FT 1506770..1506838,1506857..1506916,1507028..1507096) FT /note="6 probable transmembrane helices predicted for FT CBO1382 by TMHMM2.0 at aa 20-39, 196-218, 239-261,276-298, FT 305-324 and 362-384" FT /inference="protein motif:TMHMM:2.0" FT CDS 1507125..1508225 FT /transl_table=11 FT /locus_tag="CBO1383" FT /product="putative ABC transporter, permease protein" FT /db_xref="UniProtKB/TrEMBL:A5I1L4" FT /protein_id="CAL82926.1" FT /translation="MKILRYGFIQFKRMIKDIKVIGFMLIMPLVVITIINFAIKSGGGS FT TIMVDVAFNVEDNGKEGKQLLEELKIPTKSIFYKDKDKAIESLNKNDVVAVYEIPKNFS FT EKIKKGEKPEIKAYKKEIGNGTLPIEKSLNNNINKKVRENLLINKNIIKSKNQLDSNSV FT KAVIENTKNIEEGAFLVLTLIINFIIFSANNVSSEILNFKKQNILKRAITTSNRGFEII FT GGIYLGMILIQSFVYMSVYIGGKFIIGYSFDNLVFILINTIIASIFSVSLGVFVTRLFQ FT NESVVVLVVNIIGISTTFLSSIHSMGLSVSKSSWILLNIEKFTPQYWIFDSMKNSSIFP FT NIFIVILMSLVLFTAGNIKVRDFATN" FT sig_peptide 1507125..1507242 FT /locus_tag="CBO1383" FT /note="probabilty 0.988, with cleavage site probability FT 0.291 between residues 40 and 41" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1507182..1507241,1507647..1507715,1507776..1507844, FT 1507887..1507955,1507974..1508042,1508136..1508204) FT /note="6 probable transmembrane helices predicted for FT CBO1383 by TMHMM2.0 at aa 20-39, 175-197, 218-240,255-277, FT 284-306 and 338-360" FT /inference="protein motif:TMHMM:2.0" FT CDS 1508229..1508462 FT /transl_table=11 FT /locus_tag="CBO1384" FT /product="putative membrane protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:A5I1L5" FT /protein_id="CAL82927.1" FT /translation="MEVIFVKKANKTLIIGIFIITITTSLRHFTIQLPEFVLGLGYGIG FT IALELIGVYSINHDISKLQNCKRNFIKKCLNK" FT misc_feature order(1508262..1508321,1508334..1508402) FT /note="2 probable transmembrane helices predicted for FT CBO1384 by TMHMM2.0 at aa 12-31 and 36-58" FT /inference="protein motif:TMHMM:2.0" FT repeat_region 1508538..1508699 FT repeat_region 1509117..1509146 FT CDS complement(1509153..1509704) FT /transl_table=11 FT /locus_tag="CBO1385" FT /product="putative reductase" FT /db_xref="GOA:A5I1L6" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:A5I1L6" FT /protein_id="CAL82928.1" FT /translation="MNTVLQTIKNRRSIRGYKPEQIKEEELQCILEAAIYAPSGCNHQS FT WHFTVIQNRDLITTMSNVAKEKLKDLPNENFRNMGNNEKLDLTHGAPTLILVSGKEGNY FT SPLVDCSAAIENMLIAAESLNIGSLWIGLISLAFENKEVMEKLNIPNGYKPYFGIALGY FT KNVGEVKAPKRNENVITYIR" FT misc_feature complement(1509216..1509683) FT /note="Pfam match to entry PF00881 FT Nitroreductase,Nitroreductase family, score 93.9, E-value FT 3.4e-25" FT /inference="protein motif:Pfam:PF00881" FT CDS complement(1510262..1510753) FT /transl_table=11 FT /locus_tag="CBO1386" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I1L7" FT /protein_id="CAL82929.1" FT /translation="MKKNYNMKKTIAMKGFISEFGEIFSEKMKKRLLELEIRTVLTRKE FT HRNKLDIKHVEHTKYPCEDLDSKNLEKEYTYGQFVITEGNLYFSDTCVENDKVMQSPIV FT NTIYNSLDDEDMLIDEDTTAKKIDDTNIDYVVDTLLTACPEVSQRYLKIVREMLSNEKR FT " FT CDS complement(1510921..1511124) FT /transl_table=11 FT /gene="cspB" FT /locus_tag="CBO1387" FT /product="cold shock protein" FT /note="Also similar to CBO0282 (63.9 38d.) and CBO1772 FT (50.7 38d.)." FT /db_xref="GOA:A5I1L8" FT /db_xref="InterPro:IPR002059" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR012156" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:A5I1L8" FT /protein_id="CAL82930.1" FT /translation="MKTGTVKWFNSEKGFGFIEVEGEKDVFVHFSAIQGDEPRKNLEEG FT QKVQFEVEEGQKGPQAANVIKL" FT misc_feature complement(1510924..1511124) FT /note="Pfam match to entry PF00313 CSD, 'Cold-shock' FT DNA-binding domain, score 131.9, E-value 1.2e-36" FT /inference="protein motif:Pfam:PF00313" FT misc_feature complement(1511026..1511082) FT /note="PS00352 'Cold-shock' DNA-binding domain signature." FT /inference="protein motif:ProSite:PS00352" FT CDS 1511391..1512854 FT /transl_table=11 FT /locus_tag="CBO1388" FT /product="putative aminoacyl-histidine dipeptidase" FT /db_xref="GOA:A5I1L9" FT /db_xref="InterPro:IPR001160" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:A5I1L9" FT /protein_id="CAL82931.1" FT /translation="MYKRIDDLLCNKVFKYFKDISNVPRESGYEKKVSDYLFNFAKEKN FT LWVIQDEYLNIIIKKKATKGYEKAPTIIFQAHMDMVCEKANEKVHDFKNDPIEFKIEGD FT MLYAKDTTLGADDGIGLAYMLAILDSNDINHPNLEMLFTTEEETTMLGALNVDHNLFEG FT RILINIDSEEEGKILVSSAGGVDIKHNVPLKWENAKENLEVFNIVVEGLKGGHSGLDIH FT KGRGNAIKILGRILKNLNYNMEYSLAFIKGGSKTNNIPVNAEAKILIEKSYENKLKEFI FT KFSNNTLKEELYLKDDNINIKLKNSTHNTDKIISEKSKNLILNSILITPNGIESMVANI FT DRLVESSVNLGTISVDDSKAILESGIRSSNETLKHKIIEKIKALGEITNSQVICHGDYP FT EWPYDEKSEVLSLSRKVFKKLYGKEAEIIAYHCGIECGVLKNKIEGLQCISIGPNIFEI FT HTPKEHLSISSAERTFQYIVEILKEMNNF" FT misc_feature 1511439..1512848 FT /note="Pfam match to entry PF01546 Peptidase_M20,Peptidase FT family M20/M25/M40, score 80.5, E-value 3.6e-21" FT /inference="protein motif:Pfam:PF01546" FT CDS 1512912..1513805 FT /transl_table=11 FT /locus_tag="CBO1389" FT /product="putative exported protein" FT /note="No significant database matches" FT /db_xref="GOA:A5I1M0" FT /db_xref="InterPro:IPR001440" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:A5I1M0" FT /protein_id="CAL82932.1" FT /translation="MNKSKKNIIIGATILILITLGGFGSYKYIKYKDYKALLNKAEAYM FT EIENYDKAIENYEKTLDYKNNKDVLDKINLAKEIKESKANYEKAMESYNKKDYVGALEL FT FKKVSKRDNKRFNLAQDKIKECIKIYVNENLDKAKALAKDKKYKEAYSYLDKVLSIDKE FT NIVAKNLKDQYIKEEKELQEEIKKAGEEEKKVEEEQKKQAEEEKKIKEENKNLQGQVTT FT KKKAEEIVKNKIGTSNNNMKTICEGEEVRQGVSYYLVHVYEVVENHTATIGWYYVRKDN FT GQVFLWDLASDILKPI" FT sig_peptide 1512912..1512981 FT /locus_tag="CBO1389" FT /note="probabilty 0.982, with cleavage site probability FT 0.537 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1512930..1512998 FT /note="1 probable transmembrane helix predicted for CBO1389 FT by TMHMM2.0 at aa 7-29" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1513011..1513112 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 25.3, E-value 0.00015" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1513155..1513256 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 7.0, E-value 0.56" FT /inference="protein motif:Pfam:PF00515" FT misc_feature 1513302..1513403 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 15.0, E-value 0.062" FT /inference="protein motif:Pfam:PF00515" FT repeat_region complement(1514042..1514177) FT /note="intergenic repeat 1" FT CDS 1514203..1515039 FT /transl_table=11 FT /locus_tag="CBO1390" FT /product="putative pyridoxine kinase" FT /db_xref="GOA:A5I1M1" FT /db_xref="InterPro:IPR004625" FT /db_xref="InterPro:IPR013749" FT /db_xref="UniProtKB/TrEMBL:A5I1M1" FT /protein_id="CAL82933.1" FT /translation="MKVDTKKVAAIHDISGYGRASLTTVIPIISLMGTQVCPIPTAVLS FT THTGGFGSPEIIDLTDNLQAYINHWKSLNLDFNCIYSGYLGSVHQINIISSFIKYFKKK FT DTLVVIDPVMGDDCELYSAIDYEMVHKMREFIKLAHVITPNYTEACYLLNKDCFKCKIS FT EKEVKKMLISLSNIGPENVIITSVPLYDNIIATVSYNKANEEFYIAKTEKLNVNYPGTG FT DAFTSVIVGSLLKGESIKTAVDKAVDFIKYGIEISLKYDYNQREGILLEKALKKLI" FT CDS complement(1515327..1515965) FT /transl_table=11 FT /locus_tag="CBO1391" FT /product="putative peptide methionine sulfoxide reductase" FT /db_xref="GOA:A5I1M2" FT /db_xref="InterPro:IPR002569" FT /db_xref="UniProtKB/TrEMBL:A5I1M2" FT /protein_id="CAL82934.1" FT /translation="MLEGNHIKKAYFSMGCFWSVEALFDSLDGVVKTYVGYTGGNTLFP FT TYNSIGDHLETLEVYYDSSKIAFENLLTIFEENHNYIVRPNLLQYYSAIFYNNENEKEL FT CLDWKKNKKEELKTEVLTKISPIEKFYYAEFYHQKYYVQLEPVIMSNLRSKFSTGNDLI FT SSPLYHKLNAYLAGYGSLKELNKEIEDFNLSEDAKNRLLSIVEGFNNSK" FT misc_feature complement(1515501..1515944) FT /note="Pfam match to entry PF01625 PMSR, Peptide methionine FT sulfoxide reductase, score 133.9, E-value 3.1e-37" FT /inference="protein motif:Pfam:PF01625" FT CDS 1516515..1517279 FT /transl_table=11 FT /locus_tag="CBO1391A" FT /product="putative ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I1M3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5I1M3" FT /protein_id="CAL82935.1" FT /translation="MKEILKSINITKVYGEKRNTYQALNGIDMKVFEGEFVGVMGPSGA FT GKSTLLNIISTIDRPTGGKILIDGDDITKLKGDKLSDFRRNKLGFIFQDFNLLDTLTVK FT ENIALPLSLSKLSYKKIDKKVIEITEKLGIKDLLNKYPYEISGGQKQRAAAARALINKP FT ALILADEPTGALDSKSSKELLETLSLLNERDKSTIMMVTHDAFAASYCSRVIFIKDGKL FT YKEIENSLSRKDFFREILDVTSMLGGENNGLI" FT CDS 1517266..1519155 FT /transl_table=11 FT /locus_tag="CBO1392" FT /product="putative ABC transporter, permease protein" FT /db_xref="GOA:A5I1M4" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5I1M4" FT /protein_id="CAL82936.1" FT /translation="MGLFSIAFKNVKRNFKNYAMYFISMIFSVLVYFMFKSIEYNDQIA FT NVANGMKTVSKAFSGASVIIALFVFMFIWYSNSFFIKKRKREIGLYSMLGVKKKNIAAM FT MFYETMTMGIIALVIGAFLGTFFSKGFILIFLKLIDAENIIKTTFSIKALVSTIKTFIL FT IYFIVSISGASIIYRYELIDLFMAESKREKEPKASKIKAILSLILLLGGYIIYISSKGS FT SLGSAAMVTLITVVIGTYLFFSSFTVYYLKIKRNNKKFHFKGLNMISNSQLLYRIKGNA FT RALATIAILIATTLTASGASISFYKFFSQNMDKANPFDYVIKAEDNKIKNDIDKLIKNN FT TKNKLKEKIDITALQYKNDGSDIYDGKSILSEKDFNKIAKAKNIEVKNKINEEKDAYYF FT PTYADKNHKINGIRIKSEYFKIVHSEERSLVNMMILDNTLIVKDEEFIKLEKQLKKEKY FT VLYLVENHNRSGELTKDFNNIIKNHEKSKNGPEHKLVKSNYYENYRENVSSAGTMLFIG FT CFVGLVFLVCTASIIFFKQLSEAMEERHRYKILRNIGVRNKELKASIYKQMTFIFFAPL FT IVGIAHGGVALTIFGELLNLGILAPIIIVAIPYTIVYLIYYFLTAQFYYKAIS" FT misc_feature order(1517326..1517379,1517437..1517505,1517566..1517634, FT 1517743..1517811,1517869..1517922,1517950..1518018, FT 1518112..1518180,1518799..1518867,1518970..1519038, FT 1519051..1519119) FT /note="10 probable transmembrane helices predicted for FT CBO1392 by TMHMM2.0 at aa 21-38, 58-80, 101-123, FT 160-182,202-219, 229-251, 283-305, 512-534, 569-591 and FT 596-618" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1517407..1517808 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 36.2, E-value 8e-08" FT /inference="protein motif:Pfam:PF02687" FT misc_feature 1517422..1517451 FT /note="PS00599 Aminotransferases class-II FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00599" FT CDS 1519328..1519825 FT /transl_table=11 FT /locus_tag="CBO1393" FT /product="putative exported protein" FT /db_xref="InterPro:IPR023346" FT /db_xref="UniProtKB/TrEMBL:A5I1M5" FT /protein_id="CAL82937.1" FT /translation="MKKILKFLVGLVLILAIGSGVFLRNVLFDLKHKDEIKKYATEYNV FT DPYLVAAVINFETANEELKYEPSKPCGPFNLKDTKVLEYAKEMGLKNFKKEDIGNSDVN FT VKIGTWYISKNFKGNYREFAAKWVERNQQEDNKMKDYAREYYGPKMEKRAKIYKVIHPE FT LK" FT sig_peptide 1519328..1519397 FT /locus_tag="CBO1393" FT /note="probabilty 0.900, with cleavage site probability FT 0.417 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT misc_feature 1519346..1519411 FT /note="1 probable transmembrane helix predicted for CBO1393 FT by TMHMM2.0 at aa 7-28" FT /inference="protein motif:TMHMM:2.0" FT CDS 1520265..1520966 FT /transl_table=11 FT /locus_tag="CBO1394" FT /product="two-component response regulator" FT /db_xref="GOA:A5I1M6" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:A5I1M6" FT /protein_id="CAL82938.1" FT /translation="MSYKIMIIEDDKNIARLLGEHIEKYGYEALVAKDFKKILETFEIE FT KPNLILLDVNLPKFDGYYWCRRIREKSLCPIIFISARDSEMNQVMAIESGADDYITKPF FT YYEVVLAKIKSQLRRVYGDYAANSQVERILDVEGLLFYPERLQAHFNEKETMLSKKEGD FT LLDEMMKIYPKVATRQELLEKIWDDTTFVDENTLNVNIARLRKKLLDLGIKDSIETVRG FT AGYRLHVTWRK" FT misc_feature 1520271..1520627 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 93.1, E-value 5.8e-25" FT /inference="protein motif:Pfam:PF00072" FT misc_feature 1520718..1520945 FT /note="Pfam match to entry PF00486 FT trans_reg_C,Transcriptional regulatory protein, C terminal, FT score 58.8, E-value 1.2e-14" FT /inference="protein motif:Pfam:PF00486" FT CDS 1520968..1521945 FT /transl_table=11 FT /locus_tag="CBO1395" FT /product="two-component sensor histidine kinase" FT /db_xref="GOA:A5I1M7" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="UniProtKB/TrEMBL:A5I1M7" FT /protein_id="CAL82939.1" FT /translation="MKIFIKNNKGVIILFILNFMILFSLYNLMGGFEDFNNFIYFMLLS FT LFNLLVYLILKYLNERKMYKSLEKKPEIFEDCLNSFGDSTLGKNLNGYTGELYSIYKYH FT MHENIKKQTEHLNFINQWVHQMKTPLSVIKLIIQENVEQQCIKDIKEEVEKLEEGLNIA FT LYNARLENFHNDFNVAEFDLKELVLDRVNYNKKLFIKNGVFPKVEMNNIKIKSDRKWIS FT FILDQIIINGVKYSKGKGKLIEIKAGEQQKRSYIYIRDEGIGIPKKDINRVIEPFYTGE FT NGRTFGESTGMGLYITNEVCKKLNHELEIQSNEGEGTKITIYFN" FT misc_feature order(1520998..1521066,1521079..1521132) FT /note="2 probable transmembrane helices predicted for FT CBO1395 by TMHMM2.0 at aa 11-33 and 38-55" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1521307..1521483 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 19.9, E-value 0.00087" FT /inference="protein motif:Pfam:PF00512" FT misc_feature 1521613..1521942 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score FT 77.4,E-value 3.1e-20" FT /inference="protein motif:Pfam:PF02518" FT CDS 1522004..1522759 FT /transl_table=11 FT /locus_tag="CBO1396" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I1M8" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:A5I1M8" FT /protein_id="CAL82940.1" FT /translation="MDIIELKEVYKIYGTEKGKIALKNINLSVNEGEFISIMGPSGSGK FT STLLKLASTIEKPSAGSILINGIDVKKINEEERREFRRKNFSFVFQDVKLIKNLTIKDN FT IIYPMLLENNNKKCIEEAADKILKLLHIENLQHRRVWELSGGQSQKGEIGRALIQRKKI FT MFLDEPTGRLDFNSRKKIMEIFKNFNAKEKCTIFLVTHDPFVASYAKRVLFIKDGEIYS FT EIYMGEDQESFYKDILNFNMFLGGRTNEF" FT misc_feature 1522097..1522657 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 197.0, E-value 3e-56" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1522118..1522141 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1522749..1524557 FT /transl_table=11 FT /locus_tag="CBO1397" FT /product="putative ABC transporter, permease protein" FT /db_xref="GOA:A5I1M9" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:A5I1M9" FT /protein_id="CAL82941.1" FT /translation="MSFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELI FT QDSFTIGFADDLNFIKLLLIIGIFFLTDYSINIFLGSRIEEFQIFYKLGISQKKMKKII FT FIESLFLGIIITVFGIIIAFVFSKFMMMGIGRVLNKKINTIGNLKAIKDTIKVFFIIFI FT ICGITEGRYVKGINKTYKERKPSLFLSIACIMMIICLLIISVRMDYFKSTGEIILFFIL FT GFLYTLLALTELFPYVLTKISKIKLIYMDEVNMIFISNVREKTLLNRSVLFVMTMFLSI FT SIFIFGILYVQKDLIDKNKDILYPIDIGYVVKEKDYNNIIDNKLKENNINFEKVKVTFY FT DVESAKYSVISESEYKKIANKLFYPVYNIEEGKAVILYNTSMSEEDIKKYYFNEVININ FT GNKVKINKIGEKSIFQSKTMGNIIIVKDSSLMILPKDKKINYYMYNIQSSKKSIKELEN FT IKRSLPDERIYIKQLELMKERGSAYGFFYLCSFVALVFFLMGVSFLYYKFYDDIKKEKG FT KYDILINLGISKKTVNSIINKEMLVMFFVPFLISSLNLFFIFKLNRLIYNYKGDVSETH FT VFIIYLFIYTFYFMVWKRKIIEEVNE" FT misc_feature order(1522806..1522874,1522932..1523000,1523058..1523126, FT 1523208..1523267,1523301..1523369,1523397..1523465, FT 1523556..1523624,1524198..1524266,1524366..1524425, FT 1524468..1524524) FT /note="10 probable transmembrane helices predicted for FT CBO1397 by TMHMM2.0 at aa 20-42, 62-84, 104-126, FT 154-173,185-207, 217-239, 270-292, 484-506, 540-559 and FT 574-592" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1524294..1524359 FT /note="Predicted helix-turn-helix motif with score FT 1055.000, SD 2.78 at aa 516-537, sequence FT KGKYDILINLGISKKTVNSIIN" FT CDS 1524626..1525348 FT /transl_table=11 FT /locus_tag="CBO1398" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR021729" FT /db_xref="UniProtKB/TrEMBL:A5I1N0" FT /protein_id="CAL82942.1" FT /translation="MNFMPFDNYNMCKFCYLNRYNQNMHNNFKNYNNYYRKCNMETIPL FT NEQNLQPKNFRITYPFVKDIGNENISKFVNKSIANEVSNLFREQALPPEKINIQEVIGF FT YDVKLNKSCLLSILFGIYTYYANAAHGSTTYSSLNIDIDTGKIYKLSDLFTSRINYKPI FT LEQKVKEYIKVNNVPLLEEYKGLHEDQQFYLTPNSLVLYYPIYEYTPYAYGLFQVPIPF FT KDILNLLGPASPIQRLLK" FT CDS 1525724..1526728 FT /transl_table=11 FT /locus_tag="CBO1399" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR021243" FT /db_xref="UniProtKB/TrEMBL:A5I1N1" FT /protein_id="CAL82943.1" FT /translation="MMRGINICQENGTLNEKSIGWSRNPIFHCNLKGNKFRKKKWNYWY FT MVNEDCLFSATVADLDYIGMAFVYFYDFNTREFAEKTVITPLGKGCSISENVFENVEFS FT NDKLQVLFEWNKYLKSMSILVHCKDFKGRNLTAKFSVFYPKGHETLNVLIPWNKNKFQF FT TSKQNCLPTEGRIMINNKTYTFDKSNSFAGLDFGRGIWPFKIMWNWATASGNQQGRIIG FT FNLGAKWTDGTGITENALLIDGKILKLNECILYDYDKNNLMKPWNIKTEISDKVNLIFK FT PIYDRMARTDVVLLKSTVHQIIGEFYGAIKDEQGNIINIKALKGCAEEHYAKW" FT CDS 1527112..1528290 FT /transl_table=11 FT /locus_tag="CBO1400" FT /product="putative aminotransferase" FT /db_xref="GOA:A5I1N2" FT /db_xref="InterPro:IPR001176" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:A5I1N2" FT /protein_id="CAL82944.1" FT /translation="MKYNFDKVVNRDNTNCSKWNFNKETFGYEDIISMWIADMDFETVP FT EVKEEIINRAHHGIYGYTATAESYYKEVVNWMKKRHGWNIKKEWITNTPGIVMAVNTIV FT RTFTHSGDKVLLQRPIYYPFFKAINNNGCHIVNNPLKFDGKRYEMDFEDLDNKLSDPRV FT KIMILCSPHNPTGRVWTKEELVKVGNLCLKHNVLVISDEIHSDLIYKPNKHIPFAAICK FT EFADISITCTAPSKTFNLAGLQGSNIIISNEILMNEFKIAMENIGLSRLNIFASIACEA FT AYKYGEQWVEELIDYLQENKEFAKKFIKEKVPMLKVIEPEGTYLLWIDCRELKMSKEEL FT EEFMLKEAGVAFDEGYIFGEEAIGFERMNIACPREVLKGALEKIEKAISNKM" FT misc_feature 1527352..1528275 FT /note="Pfam match to entry PF00155 FT aminotran_1_2,Aminotransferase class I and II, score 38.3, FT E-value 1.8e-08" FT /inference="protein motif:Pfam:PF00155" FT CDS 1528378..1529043 FT /transl_table=11 FT /locus_tag="CBO1401" FT /product="putative ABC transporter, membrane protein" FT /db_xref="GOA:A5I1N3" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:A5I1N3" FT /protein_id="CAL82945.1" FT /translation="MIFDLEYFNKLVPLMLKHLKVTFIISFLALILGLILAIFIAVINE FT LKIKVLYSISKIWVSFFRGTPLIAQLFFLYFGIVQLIPSLKNMDAMTVAIIGLGFNASA FT YMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNSFVDIIKGS FT ALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYLQNILERRMNNVY" FT misc_feature 1528420..1529034 FT /note="Pfam match to entry PF00528 FT BPD_transp,Binding-protein-dependent transport system inner FT membrane component, score 92.8, E-value 7.3e-25" FT /inference="protein motif:Pfam:PF00528" FT misc_feature order(1528438..1528506,1528564..1528632,1528840..1528908, FT 1528951..1529004) FT /note="4 probable transmembrane helices predicted for FT CBO1401 by TMHMM2.0 at aa 21-43, 63-85, 155-177 and FT 192-209" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1528717..1528803 FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 1529062..1529799 FT /transl_table=11 FT /locus_tag="CBO1402" FT /product="putative ABC transporter, ATP-binding protein" FT /db_xref="GOA:A5I1N4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:A5I1N4" FT /protein_id="CAL82946.1" FT /translation="MIKISNLHKSFNGVEVLKGINLDIKKGEVVAVIGPSGTGKSTLLR FT CMNFLEKPEKGIIEIEDLKVDVEKATKQQIHELRLNTSMVFQSYNLFKNKTALENIMEP FT LVIVKKMEKDKAKERALNILKQVGLEDKKDYYPSKLSGGQQQRVGIGRAMAVDPKIMLF FT DEPTSALDPELVGEVLEVIKKLAEQDTTMIIVTHEMRFAESAADKVIFMDGGNIVEQGT FT PEEVFNNPKNERTIKFLNKVKDK" FT misc_feature 1529140..1529706 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 228.0, E-value 1.4e-65" FT /inference="protein motif:Pfam:PF00005" FT misc_feature 1529161..1529184 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1529479..1529523 FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT repeat_region 1529900..1530062 FT /note="intergenic repeat 2" FT CDS 1530194..1530442 FT /transl_table=11 FT /locus_tag="CBO1403" FT /product="putative regulatory protein" FT /note="No significant database matches" FT /db_xref="GOA:A5I1N5" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:A5I1N5" FT /protein_id="CAL82947.1" FT /translation="MLYQFIRGIYMLNGKKIREARIKLGYTARDIENLTHNPKFTTSIS FT KSYLEELERGDKKNPSFEKIVVLSQVLMCKLDDLVAR" FT misc_feature 1530242..1530430 FT /note="Pfam match to entry PF01381 HTH_3,Helix-turn-helix, FT score 28.9, E-value 1.3e-05" FT /inference="protein motif:Pfam:PF01381" FT CDS complement(1530641..1531915) FT /transl_table=11 FT /locus_tag="CBO1404" FT /product="putative D-alanyl-D-alanine carboxypeptidase" FT /db_xref="GOA:A5I1N6" FT /db_xref="InterPro:IPR001967" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR018044" FT /db_xref="UniProtKB/TrEMBL:A5I1N6" FT /protein_id="CAL82948.1" FT /translation="MRKGKTTLISLLIFILTLTSNVFAAGDSNTEPPTIYGKTAMTIDV FT ETGEIIYAKNIDKRMYPASTTKYLTALLLAENKGKNDNIPYTATAKSQPQYSLNINLHP FT INIGETIKAENVMDGLLLFSGNDVAYMIGDALAGNNKNFENMMSKKIQELNLKNTHFVT FT PNGLHNPNHYTTAYDLSVISRAALKNPWVYQSSNKKESSIVTSKGTKMAIENSNKLLGK FT DGCVAGKTGYTDAAGRCLVTLFNRDGRKILGVVMGSVYDAKDSFVFQDMKKIIDWSYNV FT KPSTLYKKDSSLKTETVTYNPLKIIGPSVTIDVPIILKEDVTYYKNEVNDKEANKTINI FT DNTSYAALSGKKNMGTLTVKEREYEKKYEVYSGLPKEEIMKKNMPFYVVSIILVLAIIT FT VIFFLVKFFKNKINKKNRNKNKYWY" FT misc_feature complement(order(1530692..1530760,1531838..1531897)) FT /note="2 probable transmembrane helices predicted for FT CBO1404 by TMHMM2.0 at aa 7-26 and 386-408" FT /inference="protein motif:TMHMM:2.0" FT misc_feature complement(1531061..1531843) FT /note="Pfam match to entry PF00768 FT Peptidase_S11,D-alanyl-D-alanine carboxypeptidase, score FT 148.0, E-value 1.7e-41" FT /inference="protein motif:Pfam:PF00768" FT sig_peptide complement(1531840..1531915) FT /locus_tag="CBO1404" FT /note="probabilty 1.000, with cleavage site probability FT 0.910 between residues 24 and 25" FT /inference="protein motif:SignalP:2.0" FT CDS 1532214..1532837 FT /transl_table=11 FT /locus_tag="CBO1405" FT /product="conserved hypothetical protein" FT /db_xref="GOA:A5I1N7" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="InterPro:IPR020084" FT /db_xref="UniProtKB/TrEMBL:A5I1N7" FT /protein_id="CAL82949.1" FT /translation="MKRELIDTVYEKFEYRKAKPIGNFKRSSVMILLNKVGTNINIIFE FT VRALTLKNQPGDVCLPGGKMEKGERPLEAALRETVEELNIDKEKIKVIGQMDYFISPYN FT FVIYPFVAIVEDIDIAPDKEEVDHVFEVPIEFFLENLPTCYEIDIVPSITGDFPFSLIR FT NGKNYKFSKGTIPEYFYEYEGNVIWGFTALIVKNFIDIIKDKKN" FT misc_feature 1532286..1532681 FT /note="Pfam match to entry PF00293 NUDIX, NUDIX FT domain,score 37.6, E-value 3.1e-08" FT /inference="protein motif:Pfam:PF00293" FT misc_feature 1532400..1532459 FT /note="PS00893 mutT domain signature." FT /inference="protein motif:ProSite:PS00893" FT CDS complement(1532888..1533235) FT /transl_table=11 FT /locus_tag="CBO1406" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:A5I1N8" FT /protein_id="CAL82950.1" FT /translation="MNVTSISLSYFFLGISLISLSFFIYFKILTNNSSKEDENNEKIVG FT DMKEPKTWLNRNNRMAYVSLFWAIVSLAVFIYLKFFIMPTIISILYVIGYAFLIVISVA FT IAGMKKQEKSI" FT misc_feature complement(order(1532912..1532980,1532990..1533058, FT 1533158..1533226)) FT /note="3 probable transmembrane helices predicted for FT CBO1406 by TMHMM2.0 at aa 4-26, 60-82 and 86-108" FT /inference="protein motif:TMHMM:2.0" FT CDS 1533571..1534734 FT /transl_table=11 FT /gene="bdh" FT /locus_tag="CBO1407" FT /product="NADH-dependent butanol dehydrogenase" FT /EC_number="1.1.1.-" FT /db_xref="GOA:A5I1N9" FT /db_xref="InterPro:IPR001670" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:A5I1N9" FT /protein_id="CAL82951.1" FT /translation="MLNFNYSIPTKIFFGKNQISVLGEQIKKYGSRVLLTYGGGSIKKN FT GVYDKVIKILKSNNIGFVELSGIDPNPRVTSVRAGVKLCKENNIDFILAVGGGSTIDCS FT KVIAASYYYEGDPWDIVIKKAKINKALPIGSILTLAATGSEMDAGAVISNMDTNEKIGV FT GHPSMAPKFSILDPEYTFTVPKNQTAAGTADIMSHIFEAYFSKTKEAYIQNRMAEAILK FT TCIKYGKVAIKEPENYEARANLMWASSLAINGLLSYGKSEPWSVHPMEHELSAFYDITH FT GVGLAILTPNWMKYVLGDENVNDFYEYGVNVWDMNPEESKYEVAQKAIEKTREYFIELG FT IPATLKEVGIGEEKLEQMAEAATRNGTLDGFKPLSTEDILNIYKLSL" FT misc_feature 1533595..1534707 FT /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing FT alcohol dehydrogenase, score 457.4, E-value 1.2e-134" FT /inference="protein motif:Pfam:PF00465" FT misc_feature 1534087..1534173 FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1." FT /inference="protein motif:ProSite:PS00913" FT misc_feature 1534330..1534353 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1534360..1534422 FT /note="PS00060 Iron-containing alcohol dehydrogenases FT signature 2." FT /inference="protein motif:ProSite:PS00060" FT CDS 1535118..1535342 FT /transl_table=11 FT /locus_tag="CBO1408" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A5I1P0" FT /protein_id="CAL82952.1" FT /translation="MECPFLTTFDEEIKCFKECALYEYKNNEGICPFKELEDNKVSIEK FT DFDNIDDTAINEGLDFIREHYKFTTEQYL" FT CDS 1535500..1537035 FT /transl_table=11 FT /locus_tag="CBO1409" FT /product="putative C4-dicarboxylate anaerobic carrier" FT /db_xref="GOA:A5I1P1" FT /db_xref="InterPro:IPR018385" FT /db_xref="UniProtKB/TrEMBL:A5I1P1" FT /protein_id="CAL82953.1" FT /translation="MGGIVVTKKKKKISFPTAFTVLFIVLIIAAILTYVVPAGSYSKLS FT YDNDSKVFVVTKPDESTNELPATQKTLDKLKIKVSVEKFKDGSINKPVAIPDTYEQVEQ FT KPQGFFEVIEAPIKGVYDTIDIIMFVLILGGVIGVVNSSGAFDAGIAKLSVATKGKEYL FT LIVIITTLIALGGTTFGLAEETIALYPILVPVFIAAGYDALVCIAALYMGSSIGTMFAT FT VNPFSVVIASNTSGISIASGFIFRIVGLILAVAITIVYIVKYGVKVKKDPSKSIIYEQR FT KEIQEKFLKDYSKDDVTLKFSLGRKLMLIIFALTFVVMIWGVAYKKWWFTEMTALFLVV FT GIILGVISRMGEKNFVDKFVAGSADLVGVALVIGVARSINLVMENGMISDTILYHSSNM FT ISGMNSSVFIIFMLIVFIGLGFFIPSSSGLAVLSMPIMAPLADSVGLPRETIVNAYMFG FT QGLISFITPTGLILATLAMVDVTYDKWIKFIMPLMGYIAALSAIMLLIQSFVA" FT sig_peptide 1535500..1535617 FT /locus_tag="CBO1409" FT /note="probabilty 0.999, with cleavage site probability FT 0.458 between residues 40 and 41" FT /inference="protein motif:SignalP:2.0" FT misc_feature order(1535536..1535604,1535854..1535922,1535983..1536042, FT 1536055..1536123,1536127..1536195,1536223..1536291, FT 1536400..1536468,1536481..1536540,1536574..1536642, FT 1536721..1536789,1536850..1536918,1536961..1537029) FT /note="12 probable transmembrane helices predicted for FT CBO1409 by TMHMM2.0 at aa 13-35, 119-141, 162-181,186-208, FT 210-232, 242-264, 301-323, 328-347, 359-381,408-430, FT 451-473 and 488-510" FT /inference="protein motif:TMHMM:2.0" FT misc_feature 1535542..1537029 FT /note="Pfam match to entry PF03606 DcuC, C4-dicarboxylate FT anaerobic carrier, score 552.1, E-value 4e-163" FT /inference="protein motif:Pfam:PF03606" FT CDS complement(1537174..1538655) FT /transl_table=11 FT /locus_tag="CBO1410" FT /product="putative nicotinate phosphribosyltransferase" FT /db_xref="GOA:A5I1P2" FT /db_xref="InterPro:IPR002638" FT /db_xref="InterPro:IPR006405" FT /db_xref="InterPro:IPR007229" FT /db_xref="InterPro:IPR015977" FT /db_xref="UniProtKB/TrEMBL:A5I1P2" FT /protein_id="CAL82954.1" FT /translation="MEYSKNFDVRNNRNLTMLVDFYELTMGNGYLKSGMGDKIAYYDMF FT FRRVPDGGGYCIMAGVQQLIEYLSGLKFTEDDIEYLRSKKEFSEEFLDYLKNFKFSCDV FT WAVPEGYPVFPNEPLVTVRGPAIQAQFVETMILLTINHQTLIATKANRICRAAENRSVM FT EFGSRRAQGYDGAIYGARAAVIGGCNATACTIAEEMFGIPAAGTMAHSWIQLFPTEYEA FT FKAWAEVNPENCVLLVDTYNVLKSGIPNAIKVFNEVLRPKGIRPKGIRIDSGDITYLTK FT ICRKMLDDAGYKDVGIVVSNSLDEFIIRDVLNQGAKIDSFGVGERLITAKSEPVFGGVY FT KLVAVEAYDGIITPKIKISENEEKITNPGFKKLYRIYDKNSHQAIADLITMHDEKIDES FT KPLEIFNPLFTWKKKKIKDYYVEELLVKIFNKGKQVYESPDVMDIKAFAKKQTERFWPE