ID AJ632318; SV 1; circular; genomic DNA; STD; VRL; 8785 BP. XX AC AJ632318; XX DT 12-OCT-2004 (Rel. 81, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 3) XX DE Cotesia congregata virus complete genome, segment Circle15 XX KW complete genomic segment. XX OS Cotesia congregata bracovirus OC Viruses; dsDNA viruses, no RNA stage; Polydnaviridae; Bracovirus. XX RN [1] RP 1-8785 RA Dupuy C.; RT ; RL Submitted (09-MAR-2004) to the INSDC. RL Dupuy C., Faculte des Sciences, IRBI UMR CNRS 6035, Avenue Monge. Parc de RL Grandmont, 37200 TOURS, FRANCE. XX RN [2] RX DOI; 10.1126/science.1103066. RX PUBMED; 15472078. RA Espagne E., Dupuy C., Huguet E., Cattolico L., Provost B., Martins N., RA Poirie M., Periquet G., Drezen J.M.; RT "Genome sequence of a polydnavirus: insights into symbiotic virus RT evolution"; RL Science 306(5694):286-289(2004). XX FH Key Location/Qualifiers FH FT source 1..8785 FT /organism="Cotesia congregata bracovirus" FT /segment="Circle15" FT /mol_type="genomic DNA" FT /db_xref="taxon:39640" FT repeat_region 1..39 FT /note="RepeatMasker" FT repeat_region 132..160 FT /note="RepeatMasker" FT repeat_region 469..493 FT /note="RepeatMasker" FT CDS join(752..785,1295..1398) FT /locus_tag="CcBV_15.1" FT /product="hypothetical protein" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:Q5ZP07" FT /protein_id="CAG17450.1" FT /translation="MLKVRNTVTSKDKVTLITFFTDRSGYDFKSRSNCGLGTNKVWILR FT " FT exon 752..785 FT /locus_tag="CcBV_15.1" FT /number=1 FT /note="ORF1" FT intron 786..1294 FT /locus_tag="CcBV_15.1" FT /number=2 FT /note="ORF1" FT repeat_region 787..835 FT /note="RepeatMasker" FT repeat_region 989..1046 FT /note="RepeatMasker" FT exon 1295..1398 FT /locus_tag="CcBV_15.1" FT /number=2 FT /note="ORF1" FT CDS complement(2511..2996) FT /gene="ank2" FT /locus_tag="CcBV_15.2" FT /note="ankyrin 3 repeat" FT /note="member of the CcBV ankyrin family" FT /db_xref="InterPro:IPR002110" FT /db_xref="InterPro:IPR020683" FT /db_xref="UniProtKB/TrEMBL:Q5ZP06" FT /protein_id="CAG17451.1" FT /translation="MGWSGNFVFFDNFDHENIFHCLCCDESNDSLQTMQMLVNNVNSYL FT LRQYNSCGQQCVHIVASRDTPEAQRKFEFLIRWGADVNSKNKCCGVTPLHIAALTKNYR FT LANLICQQPGRALDICNVDQKIPWRIAYKLEDRNMMWLLRVHGAQCEVSDVEVDDKI" FT CDS 2823..3119 FT /locus_tag="CcBV_15.3" FT /product="hypothetical protein" FT /note="ORF2" FT /db_xref="UniProtKB/TrEMBL:Q5ZP05" FT /protein_id="CAG17452.1" FT /translation="MHTLLSTGIILPQQVTVDVVDKHLHCLQAVITFVATKTVENVFMV FT EIVEKHEVAGPTHRAETIMHRSRRSLQARTNFCMTGRAKDWGLFKYVTYSIYL" FT CDS join(4048..4166,4246..4351) FT /locus_tag="CcBV_15.4" FT /product="hypothetical protein" FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q5ZP04" FT /protein_id="CAG17453.1" FT /translation="MIMKPDPVTYFLQVQNIPAKLVRNSTRTGFINVFQKVSHKELADA FT FRCDTALPKDLYSVKINFASGNQSCNELR" FT exon 4048..4166 FT /locus_tag="CcBV_15.4" FT /number=1 FT /note="ORF3" FT intron 4167..4245 FT /locus_tag="CcBV_15.4" FT /number=1 FT /note="ORF3" FT exon 4246..4351 FT /locus_tag="CcBV_15.4" FT /number=2 FT /note="ORF3" FT repeat_region 4749..4785 FT /note="RepeatMasker" FT repeat_region 6416..6443 FT /note="RepeatMasker" FT CDS complement(join(6581..6682,6937..7020)) FT /locus_tag="CcBV_15.5" FT /product="hypothetical protein" FT /note="ORF4" FT /db_xref="UniProtKB/TrEMBL:Q5ZP03" FT /protein_id="CAG17454.1" FT /translation="MASALLMLSRLVCMLVVVAVNARLDYDWSPLSFETHYSRDSRDGG FT WGSGLFKMVLSGWNDD" FT exon complement(6581..6682) FT /locus_tag="CcBV_15.5" FT /number=3 FT /note="ORF4" FT intron complement(6683..6936) FT /locus_tag="CcBV_15.5" FT /number=1 FT /note="ORF4" FT exon complement(6937..7020) FT /locus_tag="CcBV_15.5" FT /number=2 FT /note="ORF4" FT repeat_region 8138..8159 FT /note="RepeatMasker" XX SQ Sequence 8785 BP; 3028 A; 1474 C; 1486 G; 2797 T; 0 other; atatatatat atatatatat atatatatat atatatatac agtcttgtgg cttttttatt 60 ttattaattg tatatgaacg acactgaatt acctaaccat tcgcatttag cgacttacaa 120 ttctctccaa gaatttaaaa aaaaaaaatt taattaaatt gatgcatttg tttcgaaagt 180 tagagtgttt tagagagtta aagtgttaga gagttttcag ggttccataa atgacggaca 240 ggaaaatttt ttgacctatt ttgatgtttt ttttcgtttc tagtgcacta aatcaatttt 300 tgaaaagtgt caaattaatc tctattaaat tatcttgaca atagtatgca aaatatcttg 360 aatccgtgaa ctaacaagac tataatgatg aaaatagttg ccgaaatgag gtgaaaaaaa 420 tttttcgatc gtaaagcact ctctgatgtt tctcatcatg agtcatgcaa taaaataatt 480 ataatattat tatccgcgtt tgagttagtc taatgtcgaa taaacataca caaaaaccat 540 gttaagaggg cgcaacacga ttatccgcgt ttgtgttggt ctgatgtcga ataaacatac 600 acaaaaacca tgttaaaagg gcgcaacacg attatccgcg tttgtgttgt cctaatgtcg 660 aatgaacata cacaaaaacc atgtgaaaag ggcgcaacac gattatccgc gtttgtgtgg 720 tcctaatgtc gaataaacat acacaaaaac catgttaaaa gtgcgcaaca cggtcacaag 780 caaaggtaat aaaataatca taaaatattt aaattataat aaatttttaa aataagttaa 840 aagagatttt cttagtgaga ttttgtcgtt gggagattat gtcggggaga ttttgtcttg 900 gggagatttt gtcggggaga ttttgtccgg ggagatttcg tggtacaacc ggtttaatcg 960 ttcaaaagtt gtaagcgagt cacatagtca cacacaaaca cacacacaca cacacacaca 1020 cacacacaca cacacacaca cacacagtga caacatcgcg ggggtagtca gggaagcttc 1080 ctatgacctt aaaacgtcga gatctgatga aaactcgatt tttgcaaaac ggggtgaaaa 1140 caataacttc ccgatttttg aaaatcttca attttcttag cgggaagtta aaaatttgac 1200 atttaaaaat attgaataat ctccagaagt cataagtgtt gcttgtcacc acatcctacg 1260 ttgacaaatc gatctcatac tttatatttt atagataaag tcacacttat tacgtttttt 1320 actgaccgct ccggttatga ttttaaatca cgatcaaatt gcggcttggg aacaaacaaa 1380 gtatggatac tgcggtaata agtttaatat ttgtatagct tattaaatgt tgaacaaaaa 1440 tactgaacaa aatccagtaa ataagctttt aggtcatcat aagtgtaatc aacatcgtcg 1500 ttcaccagga acctcattca aaccattatc agtttggatt cattaatcgt cgtcaagcaa 1560 gcggggaact tatctcgttg cctacaagtt atgacgttgc ggcatactat taataacgta 1620 acgagatagt ctgacttctt tctctatgaa caataattta tcctgccatc taataatcta 1680 taactgttgt tcagtattgt ttcagtaatg tttcagtatt gtttcattat tatttcagta 1740 actgttcttc aggacgttga aaaaatgatt attatttatt ttctaatttt gaacaaatgt 1800 ttccaattcc aaagactgaa aggccctata ggttaagtgc ctgaacgcct ctgacctatt 1860 caatttcaac gtacctcgac gcttggaaaa acttaaaaga tcgtggcata ccaattttac 1920 gacgatagaa gagaaaaaag aactactaag ggattttaga atttaaaata agatacagaa 1980 ttaaattttg ttatatttaa tagtatacat cctaatacaa ctgatttttc taaaactaga 2040 attatcattc taaattactt aactaataca tcataaccac gtcactaact tatctagaac 2100 tagtttcaaa ggttacaaaa aaaaattttt gaatcgtcca ggtgactcaa aattttacat 2160 acaaagtata tttatttact aagtgtgctt aagacctaat tacattataa tatttctaat 2220 gacgctgaga ctgcatcgct aattatttta attaattaga actaactaaa aaggttacaa 2280 aagagaattt gtaaatggtc taggtgactc tgaattttgc ttataaagta tacttaacta 2340 ctaagtatgt ttaaaagcta attacataat attatttcta agtgacacaa caagtataac 2400 agagataaca ataacaccaa cttacatata attaacaatg aatcttaacc taatagatgt 2460 caactagata agcaagctaa caccactcaa ggaacttcat accgtgcttc tcagatttta 2520 tcatcaactt ccacatcaga cacttcacat tgagcaccat gcactcgtag cagccacatc 2580 atgttccgat cctccagttt ataagcgata cgccacggaa ttttctgatc gacgttgcag 2640 atgtcgagtg ctctgcctgg ttgctggcaa atcaaattgg ccagtctgta attcttggtg 2700 agagctgcga tgtgcaaagg agtaacacca caacacttgt ttttgctgtt gacatcagca 2760 ccccatcgaa ttagaaattc gaattttctt tgggcttcag gagtgtctcg actggctacg 2820 atatgcacac attgttgtcc acaggaatta tactgccgca acaagtaact gttgacgttg 2880 ttgacaagca tctgcattgt ctgcaagctg tcattacttt cgtcgcaaca aagacagtgg 2940 aaaatgtttt catggtcgaa attgtcgaaa aacacgaagt tgccggacca acccatcgtg 3000 cagagacaat aatgcaccgt agcagacgaa gcttacaggc gcgaaccaac ttttgtatga 3060 ctggtcgtgc aaaagattgg ggactattta agtacgttac atatagtatc tatctttaac 3120 ttctagaatc aaaagtcagc gcttatcaac ttaattgttg gtcattaaaa agcgatatca 3180 gagataatga tggtcaagca tagacggatc ttgcttctat caactaaagc ttcacgaact 3240 gtattcagag atttcatcat ctataagatt gccataagca ggtttgaact tacatcatct 3300 ttatatttcg tatttagaac gttgaagatt cagattcttc cataagtagc gattgcgcta 3360 aagggattcg aaagtttgat tctgtataag aatctaaagt cagactttca atcacattct 3420 aatcgaagtg ccacagatga aatccagtaa gcactgaaca taaggcgcca gcgtgaacat 3480 gattgttttg agcaataaaa tttaattggc ttagttattg ttggaactct aaagaggcta 3540 tcagacacta aaggttacga tgtcaaattc aatggctgtt tttgctcgac tactttatct 3600 gggagcgaaa tatctactct aaatataatc aagctcttag gatgtcaagg taactacaag 3660 taagatagta gcactgccaa tgactgtaag cattttacta ttaccatatt atagtaactt 3720 tattatcgtt taattcaaat tagttagatt cgttgaaacc tagtataaac atgctaattt 3780 atgtgcagat cagtctattt tactaactac ctccactgtg ttattttagt cagaaatgtt 3840 gtgttatata ccgctctgat cgcattagac gacatcagtc tgttcggaaa tttgtgtcac 3900 acgttcgttc actaggttcg gctaaataaa caaatggagg aaaactacgc tactgttact 3960 catgtagaat tggagcgcga tattcttatt cccttggaat gaccaattcg cggaattgca 4020 agtattgtgc tttctttaac aaaaaagatg ataatgaaac cggatcctgt gacgtacttt 4080 ctacaggtcc agaacattcc tgcaaaactt gtacgaaatt caacacgaac tggctttatc 4140 aatgttttcc agaaagtatc tcacaagtaa gatattatat agtatagttg taactgttaa 4200 cgataatcag gaagaggata aaactctatt tgttttccat ttcagagagc tcgcagacgc 4260 tttccgttgt gacaccgcat tgcccaaaga tctctactct gttaagataa actttgcaag 4320 cggaaaccaa agctgcaatg aattgcggta gttgacgcta aaaaagggcc tcaactaaga 4380 cagacatcgt ctgttggtat agtgcctcca tgctttaagt aagtaggtat tttatcatta 4440 atgtcatcaa agaagtctat caaattaaat attgtataaa aattctatat ttagacctta 4500 aaggtatgaa ataaaataag tcttttctgt aacaatgttg tttacttttt attgtggtca 4560 cacaatcgat aacaaaaaat aattccgcaa ccggtttcag aacaatgttc cagaagaatt 4620 catggagcaa aattactaag ttcgttatgt ttcagcacgc aaagcttacg agtaccgtta 4680 tagtcataaa tcctacccaa ttagtataaa aatctacgag catcagactt gcagggtttg 4740 cgatgaagaa atttataaat ttatgcttaa taaaattaat taaatcagtt tcaaaaataa 4800 gtagacacgc gttgttgtta ttcggtacat tgcgtaaagg aaaaaataac tcattgacta 4860 agtataattt catccttgcg cacggaatga tatgacacaa atgcacagag taatttccta 4920 tttttatcct ttacttcaat tacgcaagga attcatacac tttttccact taccagtggt 4980 cagtgtgatt acttgggaaa gagattttgc atcaagcaga tcatgtttat cgctacaaaa 5040 atgttttgct aataaaaaca ttaacaaatg actaaattta atgtttactg tggtaaatat 5100 gtatactttt tgatgaaaat tgaaaagcgt ctatagtttt gaaatctttt atggacagaa 5160 tgtacatatc aacgtcacca gcaagaaatt atgaatatgg caagatataa ttaaccatgt 5220 ttagataatt aacattatca ctagcttgta gtttacgaac ataacaggca atcgacattc 5280 ttatcattat ttgtcagcat atgtgagatt gttaaatatg attaaattgg taacattaaa 5340 gactcccgtt gaatataaaa acgttttata taatattgcg tcatacttat ttacaaatac 5400 ctacgttcat ctgattgtaa gcttttaagt tacggaaata tagattatca tactattata 5460 tgatatatgt gcatatttct ttaattatat gcgctaaagc ttctaacgca acaaccagca 5520 agtacgattc agagtcgata gtcgtatgtc ttctttccgt tttattgcgt tagaagcttt 5580 agcgcgtata attaaacaaa tgtgacgtaa ctcgaatgct tacaataaaa tgaacttaga 5640 tatttgtaaa taagtataac acaatattgg ttctgtaaca tttcaaccgc ggatacttca 5700 accacagcat ttcaaccgat aacctttcaa ctgaacgaca ttgaaaccga aagacagttc 5760 aactgaaaga cagtttgacc ttatgattat aggatcataa ggtcatgttg tgcccttcat 5820 catgaatctt gtgtttattt aaaaataggc caacactgtc attggttgaa ttgtccagtt 5880 gaaatgtcgt cggttgacta gtcgtggcac cgtaccactt gctggtaaaa atagttcatg 5940 cccggacaag aagctgaaac agcttatgac gacatagcag attcgcatct aggaattttt 6000 catcattttc aaaatagcta ggctatcctc attggaaacc taaattgaca aatgttccac 6060 ttggacaagg ttcattggtc gttttcggcg aactatattg aacgatgaag acaagagcta 6120 atgagattgc agatagggca tctgtgggct gacgtcacac caacgaacgc catattgatc 6180 tgtcatttcg ctccatgact ctgaagtgta cggacgagtt tttcattgtg gaactaatta 6240 cgatagtttt ggcgaagcaa gatgataact gaagccagat gatcaagtta ttggtgtcat 6300 gtgttaagac gcctaatgta ggtaaacaga cgtattggca tgattctgcc gattgaggca 6360 taggtacact atgattttgg gtgttaaaat gataaatacg tggtaaaaag ataagtttat 6420 tttattatat caaaaattat atagaatgag tatccgttga acttaaaaat aatgcagatc 6480 ataagtttct ctgatcacag cacattgatc aagtccgcac ctcattatgg acttacgatg 6540 tagtatttaa tctaaaataa actcagtaat aatcttcatt ttaatcatca ttccatccac 6600 ttaggaccat tttgaataag ccgctacccc aaccgccgtc acgagaatct ctcgagtaat 6660 gggtctcaaa actgagggga ctctgaaaat aaatatttac ggaattttaa aatttaaaat 6720 cggagttact ttgagagtga gctaagaaaa gagctgttgt agattagtca ataccttgga 6780 agaatggaat ccaatttgaa aattatgaaa cttgaatcat acgatgacaa tactacgaaa 6840 aaacactgaa tagctgaaaa atttcataga gacataagtg ttgttagaag tatgtaacag 6900 gttctttata gatgtatcga atgtccttta acttacccaa tcataatcca gccttgcatt 6960 gactgccacc acaactagca tgcagactag acgacttaac atcagtagag cgctcgccat 7020 tttgtatgta atatctgtta attaaaaacg tttcactgtt ttattttatt tgaaatattc 7080 ataaataaaa ttcaggatat aaatagagta ttctacgcaa aatcagacgg tttggaaagt 7140 tttgatttct gaaattatcg atttatcgat attttgagta tcaaacatct tctatttgaa 7200 aatttttaaa ccacacaatt taacgtagaa tacccaaaat atatttcaat attgttgcgt 7260 taccgacttg gatttttttt acgctaactc atactaaaag agaaataaat gagggtaaag 7320 ccggattgga gcttagatga aaaattcact ttttcttgaa aataaagatt taaccgaaaa 7380 gtatggcaag ttaaactatt ttttaattca gacaaaagct cagacacaat attttggaaa 7440 ttactgaaaa accgcttcat gaaacttaaa atattttaca tttgaaaaaa aaagaaaaaa 7500 agtatttctc tttggaattc aagtcggtaa aaccttaaaa atcgcaaaat aaagacagac 7560 taaaaaatac ttacgtatcc taatgaaatc aaacttagca ctgtaaagtc agactaaaat 7620 tgaaagctag agtctagatc ggcgatcttt atatactggc cagcccagct caagaattta 7680 ttatctaggt ctaaaattat tctgggtaac gaccgaaaaa gctaatttta ggatacattt 7740 gtatgtttta tatgtatgta tgtacctagg agaatgtaac tcattctcaa tttacgctgg 7800 tcttaaagtt aggtcgtggg ggcgtacgat atttaagttc accataggcc cgtccttgag 7860 attttctaag aaatatttat attaggttaa attgataagc gagcatttgt gagacctctt 7920 actgtaggtc aaaatgataa attgctacat ccacttacta gtaataaaac gcatagctga 7980 taaaatttgc gttgctatgt tctcagttca attgacatga tgtcgacaat cccaatttgc 8040 aaaacgagct gaaggccaga gttcgaggat attcagacaa caacacttga cggagaactt 8100 tggaagatta acctccaaaa atcagcaagc ttctttgatt taatattatt aattaatatg 8160 ttgatacaca actcagaaac atgcagtgca ttacaaaatg gtattttgga tttgttagga 8220 tgagaaataa tctattggct tatataaaca gctaaagctt atcgacattg aagaggtaaa 8280 gatttaaaca gtctcgatgg cttttggagc aaaacataga atgtaaactt tttttttttt 8340 catcaacgat gtggaaaaaa aaattagaaa aatgattcac tctgcaactt cccgctaatt 8400 ccattcctgg gcgcttaaaa ttgtacttat gacatttttg agtttttaag ctcaaaatat 8460 aatttatgtg ttattttgag ctcgctgagt tctaagaaat aatatttcta cacggagaga 8520 attttatatt aacagtaacc atctctattt tgtagattct actatccagg atggttatta 8580 acttttacaa agttaagatg ataaatgcaa ctatccggcg attgtaatta gtacaatcag 8640 tgtatattaa ttcccataat tatgatgata cggtttgtca tctagatggt aacttttatc 8700 atcggagata gttaaaatca tcatgattgc aatcataaaa aaaaaaagga atatatacta 8760 tatacattat tctatataca ttata 8785 //