ID AF540971; SV 1; circular; genomic DNA; STD; PRO; 3626 BP. XX AC AF540971; XX PR Project:PRJNA328; XX DT 02-OCT-2002 (Rel. 73, Created) DT 27-OCT-2009 (Rel. 102, Last updated, Version 9) XX DE Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence. XX KW . XX OS Bifidobacterium longum NCC2705 OC Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; OC Bifidobacteriaceae; Bifidobacterium. OG Plasmid pBLO1 XX RN [1] RC Erratum:[Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9430] RP 1-3626 RX DOI; 10.1073/pnas.212527599. RX PUBMED; 12381787. RA Schell M.A., Karmirantzou M., Snel B., Vilanova D., Berger B., Pessi G., RA Zwahlen M.C., Desiere F., Bork P., Delley M., Pridmore R.D., Arigoni F.; RT "The genome sequence of Bifidobacterium longum reflects its adaptation to RT the human gastrointestinal tract"; RL Proc. Natl. Acad. Sci. U.S.A. 99(22):14422-14427(2002). XX RN [2] RP 1-3626 RA Schell M.A., Karmirantzou M., Snel B., Berger B., Vilanova D., Pessi G., RA Bork P., Arigoni F.; RT ; RL Submitted (26-AUG-2002) to the INSDC. RL Bioscience, Nestle Research Center, P.O. Box 44, Lausanne 26 1000, RL Switzerland XX DR GR; AF540971_GR. XX FH Key Location/Qualifiers FH FT source 1..3626 FT /organism="Bifidobacterium longum NCC2705" FT /plasmid="pBLO1" FT /strain="NCC2705" FT /mol_type="genomic DNA" FT /db_xref="taxon:206672" FT repeat_region order(663..681,685..703,707..725,729..747) FT /rpt_type=TANDEM FT /note="19-bp tandem repeat region" FT gene 797..1690 FT /gene="rep" FT CDS 797..1690 FT /codon_start=1 FT /transl_table=11 FT /gene="rep" FT /product="probable replication protein Rep" FT /db_xref="GOA:Q8GN33" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q8GN33" FT /protein_id="AAN31777.1" FT /translation="MSNEIVKFSNQFNNVALKKFDAVHLDVLMAIASRVRERGTATVEF FT SFEELRGLMRLKQNLTNKQLADKIVQTNARLLALNYMFEDSGKIIQFALFTVFETDPAN FT QTLEVSVNERFAFLLNDLTSQFTRFELAEFADLKSKYAKEFYRRAKQYRSSGIWKVSRD FT EFCRLLNVSKSTSDSVSNLNRVVLKPIVEECGPLLGLKIERQYAKRRLSGFVFTFARET FT PPVIDARPVKAKEEQDSGHWTSVAGYGEVFTTTELFDVTAARDHFDGTVDAGECRYCRY FT DARNRERHARNAGTLF" FT gene complement(1687..3384) FT /gene="mobA" FT CDS complement(1687..3384) FT /codon_start=1 FT /transl_table=11 FT /gene="mobA" FT /product="probable mobilization protein MobA" FT /db_xref="GOA:Q8GN32" FT /db_xref="InterPro:IPR005053" FT /db_xref="UniProtKB/Swiss-Prot:Q8GN32" FT /protein_id="AAN31778.1" FT /translation="MAIYHLSVSNVSRASGSRATATLSYITGKRVHDERRGETYDYGRK FT ERVLRVGTLLPEGAPAEFADPAVLFNAVELHETGRTARPAKKIVVALPREFTPRQRVQA FT LEGYIRENLNADGYAATYAIHDDGQGNNPHAHILVANRQIDPKTGGWAKLKQRMEYVLD FT ERGERVPLIDPKTGAQKLDKRGRRQWKRTSVSLNPLDRKAKLQSLRESWAKTCNARLDE FT TARIDHRSLEDQGSDLEPTIHEGYAARAIERAGGVSERCQTNREIRRSNDLLTAIRHEL FT GRIFDRLGELFAAKIGQLRQRQARPEAAREPNWRYFEGDARRQLEADRADHAAALRGRL FT MDARADVRNRETWWKNHGTEEFEAAKQIIDVACEASREARDAGMFQRGRLRRNAEQVAG FT EQSERLRGAVPWLEDTEIPADWDQANRFRMRTTKAIHDHDMQPRTGLVAELERQLEQAE FT QAAGERPSPEQVKDLALRMAEQRERAEGQARGANRPEPSGDEPLDLSEPEDWGESSPFE FT QRATPKTKADLLGELKQRADRRTGRQEAEQRQIDPWSAQPPQRRGHGR" XX SQ Sequence 3626 BP; 588 A; 1155 C; 1195 G; 688 T; 0 other; atatcaccat acggatgatg cagaccatgt aaggagccgt ttcgatggtg aagagcctgg 60 atgagcagat caagtccctg caggagaggc aggcccagct caaggcccgc gaggacgacc 120 tcaaggcgcg gcgcagggaa cgcgaacgca aggcccgaac caagcgcctg atcgaggtcg 180 gcgcgatggc cgagtcggcc gccggcttcg agggaggcga cgagagggcc aaggaacaca 240 tcgcccgcct cgtgcagctc ggctccctgg tggaagccat gtgctccacc gacgtgatgg 300 gcaactacac gagccgcgag gacctcaggg ccaccgtcgc caaggccctg gaacacaacg 360 tcaggaccag cgacggcatg aactggaacc tgcacgacct ggtgtacgag gcgctgagcg 420 aggaatgggc caggagggac ggcgagatcg gcgacccctg ggcggacgaa ccagccagcg 480 gataccagcc gccctcatac gagcccgtca accccgaacg caggactccc caaacgccct 540 ccgacggcct gatctgacgt ccggaaaaag gcgctttgcg cccttttata atcttttaaa 600 atctttttac attcttttag gggtcccgca gccctactct cccaacgagt ttcggacgga 660 actgagtaca aaataggagc gaattgagta caaaatagga gcggactgag tacaaaatag 720 gagcgaattg agtacaaaat aggagcggac tgagtaagta agtaattttt atactcagtt 780 gtgctatgct gtggttatgt ccaatgaaat cgtgaagttc agcaaccagt tcaacaacgt 840 cgccttgaag aagttcgacg cggtgcacct ggacgtgctc atggcaatcg cctcgagggt 900 gagggagagg ggcacggcca cggtggagtt ctcgttcgag gagctgcgcg gcctcatgcg 960 gctgaagcag aacctgacca acaagcagct ggccgacaag atcgtgcaga cgaacgcccg 1020 cctgctggca ttgaactaca tgttcgagga ctcgggcaag atcatccagt tcgcgctgtt 1080 cacggtgttc gagaccgacc cggcgaacca gacgcttgag gtgagcgtga acgagcgatt 1140 cgcgttcctg ctcaacgacc tgaccagcca gttcacgcga ttcgagctgg ccgagttcgc 1200 cgacctcaag agcaagtacg ccaaggagtt ctaccgcagg gccaagcagt accgcagctc 1260 gggaatctgg aaagtcagcc gcgacgagtt ctgccgactg ctcaacgtgt ccaagtccac 1320 gtctgactcg gtctcaaacc tgaacagagt cgtgctgaag ccgattgtcg aagagtgtgg 1380 cccgctcctt ggcttgaaga tcgagcgcca gtacgcgaag cgtcggctgt cgggcttcgt 1440 gttcacgttc gcccgtgaaa ccccgcctgt gatcgatgcc aggccggtga aggccaagga 1500 agagcaagat tccggccatt ggacgagtgt ggcgggctat ggcgaggtgt tcacgaccac 1560 tgagctgttc gacgtgacgg cggcgcgtga ccacttcgac ggcaccgtgg acgcgggcga 1620 atgccggtac tgccggtatg acgctcgcaa ccgcgagcgg cacgccagga acgcggggac 1680 gctgttctag cggccgtggc cgcgcctctg gggcggttgt gcgctccatg ggtcgatctg 1740 ccgctgttcg gcttcctgac ggcctgtgcg cctgtctgcg cgctgtttga gttccccgag 1800 caggtcggcc ttggtcttgg gggtggcgcg ctgctcgaac gggctggatt ccccccagtc 1860 ctcgggttcg ctcagatcca gcggctcgtc gccggacggc tcgggccggt tcgctccccg 1920 cgcctgtccc tcggcccgtt cccgctgttc ggccatgcgc aatgcgaggt ctttcacctg 1980 ttcggggctt ggccgctcgc ctgcggcttg ctcggcctgt tcgagctgcc tctccagttc 2040 ggccacgagg ccggttctcg gctgcatgtc gtggtcgtgg atggccttgg tggtcctcat 2100 gcggaacctg ttggcctggt cccagtcggc gggaatctcg gtgtcctcga gccatggcac 2160 cgccccgcgc agcctctcgg actgctctcc ggccacctgt tcggcgttcc tgcgcagcct 2220 gccgcgctgg aacatgcccg cgtccctggc ctcgcgcgag gcctcgcacg ccacgtcgat 2280 gatctgcttt gcggcctcaa actcctcggt gccgtggttt ttccaccacg tctcgcggtt 2340 cctcacgtcg gccctcgcgt ccatgagcct gccgcgcagc gctgccgcat ggtcggccct 2400 gtcggcttcg agctggcggc gcgcgtcgcc ctcgaaatac cgccagttcg gctccctggc 2460 cgcttccggc cgcgcctggc gttggcgcag ctggccgatc ttggcggcga acagttcgcc 2520 caggcggtcg aatatccggc cgagttcgtg tcggatggcg gtcagcaggt cgttgctgcg 2580 cctgatctca cggttggtct ggcaccgctc gctgacgcct ccggcccgtt cgatggccct 2640 ggcggcgtag ccctcgtgga tggtgggttc gaggtcgctg ccctggtcct cgaggctcct 2700 gtggtcgatt ctcgcggtct cgtccagccg cgcgttacag gtcttcgccc aggattcgcg 2760 cagggactgg agcttggcct tccggtcgag cgggttcagg gacacgctcg tgcgcttcca 2820 ctgcctgcgg ccccgcttgt cgagcttctg cgccccggtc ttcgggtcga tcagcggcac 2880 ccgctcgccc cgctcgtcca gcacgtactc catgcgctgc ttgagtttcg cccagccgcc 2940 cgtcttcggg tcgatctgcc ggttggcgac gaggatgtgc gcgtgcggat tgttgccctg 3000 gccgtcgtcg tggatggcgt aggtggccgc gtagccgtcc gcgttcaggt tctcccggat 3060 gtagccctcc agggcctgca cgcgctgcct gggggtgaac tcgcgcggca gggccaccac 3120 gatcttcttg gccggcctcg ccgtccgtcc ggtctcgtgc agctcgaccg cgttgaacag 3180 cacggcgggg tcggcgaact cggccggggc cccctccggc agcagggtgc cgacgcgcag 3240 cacgcgctcc ttgcgcccgt agtcgtaggt ctcgccgcgc cgctcgtcat gcacccgctt 3300 gccggtgatg tacgagagcg tggccgtggc cctggaaccg ctcgcgcggc tcacgttgga 3360 gacggacaga tggtagatcg ccatcggctt cggctccttt cgtgatcggc cagggcggcg 3420 gggtgcgggg cggcggccct gcggcaaggg gttcccaggg gtgcggcgag cacccgctgg 3480 gcctgccggg aggctccccc ggaagggtgg gaatccaaag ggcaaggccc gtggcccccg 3540 gagggcgcgc ttacggaaaa tgcaacctcc ggttgcatgt aagtgcgccc taatctttga 3600 ttagggattt ccttgctggt agaatc 3626 //