ID AF528165; SV 1; linear; genomic RNA; STD; VRL; 6980 BP. XX AC AF528165; XX DT 16-AUG-2002 (Rel. 72, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE La Crosse virus strain Human/78 segment L, complete sequence. XX KW . XX OS La Crosse virus OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Orthobunyavirus. XX RN [1] RP 1-6980 RA Hughes M.T., Kempf B.J., Blair C.D., Beaty B.J.; RT "Complete sequence of the Bunyavirus, La Crosse virus, Human/78 strain"; RL Unpublished. XX RN [2] RP 1-6980 RA Hughes M.T., Kempf B.J., Blair C.D., Beaty B.J.; RT ; RL Submitted (11-JUL-2002) to the INSDC. RL Microbiology, Colorado State University, 3107 Rampart Road, Fort Collins, RL CO 80525, USA XX FH Key Location/Qualifiers FH FT source 1..6980 FT /organism="La Crosse virus" FT /segment="L" FT /strain="Human/78" FT /mol_type="genomic RNA" FT /note="derived from cRNA" FT /db_xref="taxon:11577" FT CDS 62..6853 FT /codon_start=1 FT /gene="Pol" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q8JPR2" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR014384" FT /db_xref="UniProtKB/Swiss-Prot:Q8JPR2" FT /protein_id="AAM94387.1" FT /translation="MDYQEYQQFLARINTARDACVAKDIDVDLLMARHDYFGRELCKSL FT NIEYRNDVPFVDIILDIRPEVDPLTIDAPHITPDNYLYINNVLYIIDYKVSVSNESSVI FT TYDKYYELTRDISDRLSIPIEIVIVRIDPVSKDLHINSDRFKELYPTIVVDINFNQFFD FT LKQLLYEKFGDDEEFLLKVAHGDFTLTAPWCKTGCPEFWKHPIYKEFKMSMPVPERRLF FT EESVKFNAYESERWNTNLVKIREYTKKDYSEHISKSAKNIFLASGFYKQPNKNEISEGW FT TLMVERVQDQREISKSLHDQKPSIHFIWGAHNPGNSNNATFKLILLSKSLQSIKGISTY FT TEAFKSLGKMMDIGDKAIEYEEFCMSLKSKARSSWKQIMNKKLEPKQINNALVLWEQQF FT MVNNDLIDKSEKLKLFKNFCGIGKHKQFKNKMLEDLEVSKPKILDFDDANMYLASLTMM FT EQSKKILSKSNGLKPDNFILNEFGSKIKDANKETYDNMHKIFETRYWQCISDFSTLMKN FT ILSVSQYNRHNTFRIAMCANNNVFAIVFPSADIKTKKATVVYSIIVLHKEEENIFNPGC FT LHGTFKCMNGYISISRAIRLDKERCQRIVSSPGLFLTTCLLFKHDNPTLVMSDIMNFSI FT YTSLSITKSVLSLTEPARYMIMNSLAISSNVKDYIAEKFSPYTKTLFSVYMTRLIKNAC FT FDAYDQRQRVQLRDIYLSDYDITQKGIKDNRELTSIWFPGSVTLKEYLTQIYLPFYFNA FT KGLHEKHHVMVDLAKTILEIECEQRENIKEIWSTNCTKQTVNLKILIHSLCKNLLADTS FT RHNHLRNRIENRNNFRRSITTISTFTSSKSCLKIGDFRKEKELQSVKQKKILEVQSRKM FT RLANPMFVTDEQVCLEVGHCNYEMLRNAMPNYTDYISTKVFDRLYELLDKGVLTDKPVI FT EQIMDMMVDHKKFYFTFFNKGQKTSKDREIFVGEYEAKMCMYAVERIAKERCKLNPDEM FT ISEPGDGKLKVLEQKSEQEIRFLVETTRQKNREIDEAIEALAAEGYESNLEKIEKLSLG FT KAKGLKMEINADMSKWSAQDVFYKYFWLIALDPILYPQEKERILYFMCNYMDKELILPD FT ELLFNLLDQKVAYQNDIIATMTNQLNSNTVLIKRNWLQGNFNYTSSYVHSCAMSVYKEI FT LKEAITLLDGSILVNSLVHSDDNQTSITIVQDKMENDKIIDFAMKEFERACLTFGCQAN FT MKKTYVTNCIKEFVSLFNLYGEPFSIYGRFLLTSVGDCAYIGPYEDLASRISSAQTAIK FT HGCPPSLAWVSIAISHWMTSLTYNMLPGQSNDPIDYFPAENRKDIPIELNGVLDAPLSM FT ISTVGLESGNLYFLIKLLSKYTPVMQKRESVVNQIAEVKNWKVEDLTDNEIFRLKILRY FT LVLDAEMDPSDIMGETSDMRGRSILTPRKFTTAGSLRKLYSFSKYQDRLSSPGGMVELF FT TYLLEKPELLVTKGEDMKDYMESVIFRYNSKRFKESLSIQNPAQLFIEQILFSHKPIID FT FSGIRDKYINLHDSRALEKEPDILGKVTFTEAYRLLMRDLSSLELTNDDIQVIYSYIIL FT NDPMMITIANTHILSIYGSPQRRMGMSCSTMPEFRNLKLIHHSPALVLRAYSKNNPDIQ FT GADPTEMARDLVHLKEFVENTNLEEKMKVRIAINEAEKGQRDIVFELKEMTRFYQVCYE FT YVKSTEHKIKVFILPTKSYTTTDFCSLMQGNLIKDKEWYTVHYLKQILSGGHKAIMQHN FT ATSEQNIAFECFKLITHFADSFIDSLSRSAFLQLIIDEFSYKDVKVSKLYDIIKNGYNR FT TDFIPLLFRTGDLRQADLDKYDAMKSHERVTWNDWQTSRHLDMGSINLTITGYNRSITI FT IGEDNKLTYAELCLTRKTPENITISGRKLLGARHGLKFENMSKIQTYPGNYYITYRKKD FT RHQFVYQIHSHESITRRNEEHMAIRTRIYNEITPVCVVNVAEVDGDQRILIRSLDYLNN FT DIFSLSRIKVGLDEFATIKKAHFSKMVSFEGPPIKTGLLDLTELMKSQDLLNLNYDNIR FT NSNLISFSKLICCEGSDNINDGLEFLSDDPMNFTEGEAIHSTPIFNIYYSKRGERHMTY FT RNAIKLLIERETKIFEEAFTFSENGFISPENLGCLEAVVSLIKLLKTNEWSTVIDKCIH FT ICLIKNGMDHMYHSFDVPKCFMGNPITRDMNWMMFREFINSLPGTDIPPWNVMTENFKK FT KCIALINSKLETQRDFSEFTKLMKKEGGRSNIEFD" XX SQ Sequence 6980 BP; 2581 A; 1088 C; 1351 G; 1960 T; 0 other; agtagtgtac ccctatctac aaaacttaca gaaaattcag tcatatcaca atatatgcat 60 aatggactat caagagtatc aacaattctt ggctaggatt aatactgcaa gggatgcatg 120 tgtagccaag gatatcgatg ttgacctatt aatggccaga catgattatt ttggtagaga 180 gctgtgcaag tccttaaata tagaatatag gaatgatgta ccatttgtag atataatttt 240 ggatataagg cccgaagtag acccattaac catagatgca ccacatatta ccccagacaa 300 ttatctatat ataaataatg tgttatatat catagattat aaggtctctg tatcgaatga 360 aagcagtgtt ataacatatg acaaatatta tgagttaact agggacatat ccgatagatt 420 aagtattcca atagaaatag ttatcgtccg tatagaccct gtaagtaagg atttgcatat 480 taactctgat agatttaaag aactttaccc tacaatagtg gtggatataa acttcaatca 540 atttttcgac ttaaaacaat tactctatga aaaattcggt gatgatgaag aattcctatt 600 gaaagttgca catggtgact tcactcttac agcaccctgg tgcaagactg ggtgccctga 660 attttggaaa caccccattt ataaagaatt taaaatgagt atgccagtac ctgagcggag 720 gctctttgaa gaatctgtca agttcaatgc ttatgaatct gagagatgga atactaactt 780 ggttaaaatc agagaatata caaagaaaga ctattcagag catatttcaa aatctgcaaa 840 aaatattttc ctggctagtg gattttataa gcagccaaat aagaatgaga ttagtgaggg 900 gtggacatta atggttgaga gggttcaaga tcagagagaa atctcaaaat ctctccatga 960 ccagaaacct agcatacatt ttatatgggg agcccataac ccaggaaata gtaataatgc 1020 aaccttcaaa ctcatattgc tttcaaagtc cttacaaagc ataaaaggta tatcaactta 1080 cacagaagcg ttcaaatctt taggaaaaat gatggatatt ggagataagg ctattgagta 1140 tgaagaattc tgcatgtccc taaaaagcaa agcaagatca tcatggaagc aaataatgaa 1200 caaaaaatta gagcctaaac aaataaacaa tgcccttgtt ttatgggaac agcagtttat 1260 ggtaaataat gacctgatag acaaaagtga gaagttgaaa ttattcaaaa atttctgcgg 1320 tataggcaaa cacaagcaat tcaagaataa aatgctagag gatctagaag tgtcaaagcc 1380 caaaatatta gactttgatg acgcaaatat gtatctagct agcctaacca tgatggaaca 1440 gagtaagaag atattgtcca aaagcaatgg gttgaagcca gataatttta tactgaatga 1500 atttggatcc aaaatcaaag atgctaataa agaaacatat gacaatatgc acaaaatatt 1560 tgagacaaga tattggcaat gtatatccga cttctctact ctgatgaaaa atatcttatc 1620 tgtgtcccaa tataacaggc acaacacatt taggatagct atgtgtgcta ataacaatgt 1680 ctttgctata gtatttcctt cggctgacat aaaaactaag aaagcaactg tagtttatag 1740 cattatagtg ctgcataaag aggaagaaaa catattcaac ccaggatgtt tgcacggcac 1800 atttaagtgt atgaatgggt atatttccat atctagagct ataaggctag ataaagagag 1860 gtgccagaga attgtttcct cacctggact gtttttaaca acttgcctac tattcaaaca 1920 tgataatcca actctagtga tgagcgatat tatgaatttt tctatataca ctagcctgtc 1980 tatcacaaag agtgttctat ctttaacaga gccagcacgc tacatgatta tgaactcatt 2040 agctatctcc agcaatgtta aggactatat agcagagaaa ttttcccctt acacaaagac 2100 actgttcagt gtctatatga ctagactaat taaaaatgct tgctttgatg cttatgacca 2160 gagacagcgt gtccaactta gagatatata tttatctgat tatgacataa cccaaaaagg 2220 tattaaagac aatagagagc taacaagtat atggttccct ggtagtgtaa cattaaagga 2280 gtatttaaca caaatatact taccatttta ttttaatgct aaaggactac atgagaagca 2340 ccatgtcatg gtggatctag caaagactat attagaaata gagtgcgaac agagggaaaa 2400 cataaaggag atatggtcta caaattgtac caaacagaca gtgaacctta aaattttgat 2460 ccattccttg tgcaagaatt tactagcaga cacttcaaga cacaaccact tgcggaacag 2520 aatagaaaat aggaacaatt ttagaaggtc tataacaact atttcaacat ttacaagttc 2580 aaagtcttgc ctcaaaatag gggactttag aaaagagaaa gagctgcagt cagttaaaca 2640 gaagaaaatc ttagaggtgc agagtcgcaa aatgagatta gcaaacccaa tgttcgtgac 2700 agatgaacaa gtatgccttg aagttgggca ctgcaattat gagatgctga ggaatgctat 2760 gccgaattat acagattata tatcaactaa agtatttgat aggttatatg agttattaga 2820 taaaggagtt ttgacagaca agcctgttat agagcaaata atggatatga tggtcgacca 2880 caaaaagttc tatttcacat ttttcaataa aggccagaaa acgtcaaagg atagagagat 2940 attcgttgga gaatatgaag ctaaaatgtg tatgtacgca gttgagagaa tagcaaaaga 3000 aagatgtaaa ttaaatcctg atgaaatgat atctgagccg ggtgatggca agttgaaggt 3060 gttggagcaa aaatcagaac aagaaattcg attcttggtc gagactacaa ggcaaaagaa 3120 tcgtgaaatc gatgaggcaa ttgaagcatt agctgcagaa ggatatgaga gtaatctaga 3180 aaaaattgaa aagctttcac ttggcaaagc aaagggccta aagatggaaa taaatgcaga 3240 tatgtctaaa tggagtgctc aggatgtttt ttataaatat ttctggctca tagccttaga 3300 ccctatcctc tacccacagg aaaaagagag aatattatac tttatgtgca actacatgga 3360 taaagaattg atactgccag atgaattatt attcaatttg ctggaccaaa aagttgcata 3420 ccagaatgat ataatagcta ctatgactaa tcaattaaat tcaaatacag ttctgataaa 3480 gagaaattgg ctccaaggga atttcaacta cacctcaagt tacgtccata gctgcgcaat 3540 gtctgtgtat aaagaaatat taaaagaggc cataacatta ctagacgggt ctatattagt 3600 caactcatta gtccattcgg atgataacca aacatcgata acaatagttc aggataagat 3660 ggaaaatgat aaaattatag attttgcaat gaaagaattt gagagagcct gtttgacatt 3720 tggatgccaa gcaaatatga aaaagacata tgtaacaaat tgcataaaag agtttgtttc 3780 attatttaac ttgtacggcg aacccttttc aatatatggc agattcctat taacatctgt 3840 gggtgattgt gcctatatag ggccttatga agatttagct agtcgaatat catcagccca 3900 gacagccata aagcatggtt gtccacccag tctagcatgg gtgtccatag caataagtca 3960 ttggatgacc tctctgacat acaacatgct accagggcag tcaaatgacc caattgatta 4020 tttccctgca gaaaatagga aggatatccc tatagaattg aatggtgtat tagatgctcc 4080 attgtcaatg attagtacag ttggattgga atctgggaat ttatacttct tgataaagtt 4140 gttgagcaaa tataccccgg tcatgcagaa aagagagtca gtagtcaacc aaatagctga 4200 agttaagaac tggaaggtcg aggatctaac agacaatgaa atatttagac ttaaaatact 4260 cagatattta gttctagatg cagagatgga ccctagtgat attatgggtg agacaagcga 4320 catgagaggg aggtctattt tgacacctag aaaattcaca acagcaggca gtttaaggaa 4380 attatattct ttcagtaagt accaggatag actgtcttcc cctggaggca tggttgaatt 4440 gttcacttat ttgcttgaga aacctgagtt gttagtgact aaaggggaag atatgaaaga 4500 ttatatggaa tctgtgatat tccgatataa ttccaaaagg ttcaaagaaa gtttgtcaat 4560 acagaaccca gcacaattat ttatagaaca gatattgttc tcacataagc ccataataga 4620 cttttctggt atcagggaca aatatataaa cctacatgat agtagagctc tagagaagga 4680 acctgacata ttaggaaaag taacatttac agaggcttat agattattaa tgagggacct 4740 gtctagccta gaactaacca atgatgacat tcaagtaatt tattcttaca taatacttaa 4800 tgaccctatg atgataacta ttgcaaacac acatatattg tcaatatacg ggagtcctca 4860 acggaggatg ggcatgtcct gttcaacgat gccagaattt agaaatttaa aattaataca 4920 tcattcccca gccttagttt tgagagcata tagtaaaaat aatcctgaca tccagggtgc 4980 tgatcccacg gaaatggcta gagatttagt tcatctgaaa gagtttgttg agaacacaaa 5040 tttagaagaa aaaatgaaag ttaggattgc tataaatgaa gcagagaaag gacaacggga 5100 tatagtcttt gaactaaaag agatgactag attttatcag gtttgctatg agtatgtcaa 5160 atctacagaa cacaagataa aagtcttcat tctcccgaca aaatcataca caacaacaga 5220 tttctgttca ctcatgcagg ggaatttaat aaaagataaa gagtggtaca cagttcacta 5280 cctaaaacag atattgtctg gtggccataa agccataatg cagcataatg ccactagtga 5340 gcaaaatatt gcttttgagt gtttcaaatt aattacccat tttgcagact cattcataga 5400 ttcattatct aggtcagctt ttttgcagtt gataatagat gaattcagtt ataaagatgt 5460 gaaggttagc aaactttatg acataataaa gaatgggtat aatcgaactg acttcatacc 5520 attgcttttt agaactggcg atttaagaca agctgactta gacaagtatg atgctatgaa 5580 aagtcatgag agggttacat ggaatgattg gcaaacatct cgtcacttgg acatgggctc 5640 aattaatcta acaataaccg gttacaatag atcaataaca ataatcggag aagataacaa 5700 attgacatat gcagaattat gtctgactag gaaaactcct gagaatataa ctataagtgg 5760 cagaaaattg ctaggtgcaa ggcatggact taaatttgaa aatatgtcca aaatccaaac 5820 atacccaggc aattattata taacatatag aaagaaagat cgccaccagt ttgtatacca 5880 gatacattct catgaatcaa taacaaggag gaatgaagag catatggcta tcaggaccag 5940 aatatacaat gaaataactc cagtatgtgt agttaacgtt gcagaggtgg atggggacca 6000 acgtatattg ataagatctt tagactatct aaataatgat atattttctc tttcaaggat 6060 taaagtcggg cttgacgaat ttgcaacaat aaaaaaagca cactttagta aaatggtctc 6120 atttgaagga cccccaatta agacagggct cctcgacctt actgaattga tgaaatctca 6180 agatttgctt aaccttaatt atgataatat aaggaatagc aacttgatat ctttttcaaa 6240 attgatttgc tgtgaggggt cagataatat aaatgatggg ttagagtttc tgtccgatga 6300 ccctatgaac tttacagagg gtgaagcaat acattcaaca ccgatcttta atatatatta 6360 ctcaaaaaga ggagaaagac atatgacata caggaatgca attaaattac tgatagaaag 6420 agaaactaag atttttgaag aagctttcac attcagtgag aatggcttca tatcgccaga 6480 gaatcttggt tgcttagaag cagtagtatc attaataaaa ttgttgaaaa ctaatgagtg 6540 gtccacagtt atagataaat gtattcatat atgtttaata aagaatggta tggatcacat 6600 gtaccattca tttgatgtcc ctaaatgttt tatggggaat cctatcacta gagacatgaa 6660 ttggatgatg tttagagaat tcatcaatag tttaccaggg acagatatac caccatggaa 6720 tgtcatgaca gagaacttca aaaagaaatg tattgctctg ataaactcta agttagaaac 6780 acagagagat ttctcagaat tcactaaact gatgaaaaag gaaggtggga ggagtaatat 6840 agaatttgat tagtagttat gagtttacag agaacctaca attaggctat aaatttggga 6900 gggttttgga aattggctaa aattcaaaaa gagggggatt aacagcaact gtataaattt 6960 gtagataggg gcacactact 6980 //