ID AF395114; SV 1; circular; genomic DNA; STD; VRL; 2298 BP. XX AC AF395114; XX DT 03-MAY-2002 (Rel. 71, Created) DT 17-SEP-2004 (Rel. 81, Last updated, Version 2) XX DE Chicken anemia virus strain BD-3, complete genome. XX KW . XX OS Chicken anemia virus OC Viruses; ssDNA viruses; Circoviridae; Gyrovirus. XX RN [1] RP 1-2298 RX DOI; 10.1046/j.1439-0450.2002.00581.x. RX PUBMED; 12420868. RA Islam M.R., Johne R., Raue R., Todd D., Muller H.; RT "Sequence analysis of the full-length cloned DNA of a chicken anaemia virus RT (CAV) strain from Bangladesh: evidence for genetic grouping of CAV strains RT based on the deduced VP1 amino acid sequences"; RL J. Vet. Med. B Infect. Dis. Vet. Public Health 49(7):332-337(2002). XX RN [2] RP 1-2298 RA Islam R.M., Johne R., Raue R., Todd D., Mueller H.; RT ; RL Submitted (27-JUN-2001) to the INSDC. RL Faculty of Veterinary Medicine, University of Leipzig, Institute of RL Virology, An den Tierkliniken 29, Leipzig 04103, Germany XX FH Key Location/Qualifiers FH FT source 1..2298 FT /organism="Chicken anemia virus" FT /strain="BD-3" FT /mol_type="genomic DNA" FT /db_xref="taxon:12618" FT CDS 386..1036 FT /codon_start=1 FT /product="VP2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q91NA6" FT /protein_id="AAM20897.1" FT /translation="MHGNGGQPAAGGSESALSREGQPGPSGAAQGQVISNERSPRRYST FT RTINGVQATNKFTAVGNPSLQRDPDWYRWNYNHSIAVWLRECSRSHAKICNCGQFRKHW FT FQECAGLEDRSTQASLEEAILRPLRVQGKRAKRKLDYHYSQPTPNRKKVYKTVRWQDEL FT ADREADFTPSEEDGGTTSSDFDEDINFDIGGDSGIVDELLGRPFTTPAPVRIV" FT CDS 492..857 FT /codon_start=1 FT /product="VP3" FT /db_xref="GOA:Q9WB33" FT /db_xref="InterPro:IPR006858" FT /db_xref="UniProtKB/TrEMBL:Q9WB33" FT /protein_id="AAM20898.1" FT /translation="MNALQEDTPPGPSTVFRPPTSSRPLETPHCREIRIGIAGITITLS FT LCGCANARAPTLRSATADNSENTGFKNVPDLRTDQPKPPSKKRSCDPSEYRVSELKESL FT ITTTPSRPRTARRCIRL" FT CDS 859..2208 FT /codon_start=1 FT /product="VP1" FT /note="structural protein" FT /db_xref="GOA:Q8JZ35" FT /db_xref="InterPro:IPR007291" FT /db_xref="UniProtKB/TrEMBL:Q8JZ35" FT /protein_id="AAM20899.1" FT /translation="MARRARRPRGRFYAFRRGRWHHLKRLRRRYKFRHRRRQRYRRRAF FT RKAFHNPRPGTYSVRLPNPQSTMTIRFQGIIFLTEGLILPKNSTAGGYADHLYGARVAK FT ISVNLKEFLLASMNLTYVSKIGGPIAGELIADGSQSQAAQNWPNCWLPLDNNVPSATPS FT AWWRWALMMMQPTDSCRFFNHPKQMTLQDMGRMFGGWHLFRHIETRFQLLATKNEGSFS FT PVASLLSQGEYLTRRDDVKYSSDHQNRWRKGEQPMTGGIAYATGKMRPDEQQYPAMPPD FT PPIITATTAQGTQVRCMNSTQAWWSWDTYMSFATLTALGAQWSFPPGQRSVSRRSFNHH FT KARGAGDPKGQRWHTLVPLGTETITDSYMTAPASELDTNFFTLYVAQGTNKSQQYKFGT FT ATYALKEPVMKSDAWAVVRVQSVWQLGNRQRPYPWDVNWANSTMYWGTQP" XX SQ Sequence 2298 BP; 587 A; 663 C; 637 G; 411 T; 0 other; cgcagctaat ggctttatcg cacaatcgca ttccgagtgg ttactattcc atcaccattc 60 tagcctgtac acagaaagtc aagatggacg aatcgctcga cttcgctcgc gattcgtcga 120 aggcgggggg ccggaggccc cccggtggcc cccctccaac gagtggagca tgtacagggg 180 ggtacgtcat ccgtacaggg gggtacgtca caaagaggcg ttcccgtaca ggggggtacg 240 tcacgcgtac aggggggcac gtcacagcca atcagaagct gccacgttgc gaaagtgacg 300 tttcgaaaat gggcggcgca agcctctcta tatattgagc gcacataccg gtcggcagta 360 ggtatacgca aggcggtccg ggtggatgca cgggaacggc ggacaaccgg ccgctggggg 420 cagtgaatcg gcgcttagcc gagaggggca acctgggccc agcggagccg cgcaggggca 480 agtaatttca aatgaacgct ctccaagaag atactccacc cggaccatca acggtgttca 540 ggccaccaac aagttcacgg ccgttggaaa cccctcactg cagagagatc cggattggta 600 tcgctggaat tacaatcact ctatcgctgt gtggctgcgc gaatgctcgc gctcccacgc 660 taagatctgc aactgcggac aattcagaaa acactggttt caagaatgtg ccggacttga 720 ggaccgatca acccaagcct ccctcgaaga agcgatcctg cgacccctcc gagtacaggg 780 taagcgagct aaaagaaagc ttgattacca ctactcccag ccgaccccga accgcaagaa 840 ggtgtataag actgtaagat ggcaagacga gctcgcagac cgagaggccg attttacgcc 900 ttcagaagag gacggtggca ccacctcaag cgacttcgac gaagatataa atttcgacat 960 cggaggagac agcggtatcg tagacgagct tttaggaagg cctttcacaa cccccgcccc 1020 ggtacgtata gtgtgaggct gccgaacccc caatctacta tgactatccg cttccaagga 1080 atcatctttc tcacggaagg actcattctg cctaaaaaca gcacagcggg gggctatgca 1140 gaccacttgt acggggcgag agtcgccaag atctccgtga acctgaaaga gttcctgcta 1200 gcgtcaatga acctgacata cgtgagcaaa atcggaggcc ccatcgccgg tgagttgatt 1260 gcggacgggt cacaatcaca agccgcgcag aactggccta attgctggct gccgctagat 1320 aataacgtgc cctccgcaac accatcggca tggtggagat gggccttaat gatgatgcag 1380 cccacggact cttgccggtt ctttaatcac cctaagcaga tgaccctgca agacatgggt 1440 cgcatgtttg ggggctggca cctgttccga cacattgaaa cccgctttca gctccttgcc 1500 actaagaatg agggatcctt cagccccgtg gcgagtcttc tctcccaggg agagtacctc 1560 acgcgtcggg acgatgttaa atacagcagc gatcaccaga accggtggcg aaaaggcgaa 1620 caaccgatga cggggggtat tgcttatgcg accgggaaaa tgagacccga cgagcaacag 1680 taccctgcta tgcccccaga ccccccgatc atcaccgcta ctacagcgca aggcacgcaa 1740 gtccgctgca tgaatagcac gcaagcttgg tggtcatggg acacatatat gagctttgca 1800 acactcacag cactcggtgc acaatggtct tttcctccag ggcaacgttc agtttctaga 1860 cggtccttca accaccacaa ggcgagagga gccggggacc caaaaggcca gagatggcac 1920 acgctggtgc cgctggggac ggagaccatc accgacagct acatgactgc acccgcatca 1980 gagctggaca caaatttctt tacgctttac gtagcgcaag gcacaaataa gtcgcagcag 2040 tacaagttcg gcacagctac atacgcgcta aaggagccgg taatgaagag cgacgcatgg 2100 gcagtggtac gcgtccagtc ggtctggcaa ctgggtaaca ggcagaggcc atacccatgg 2160 gacgtcaact gggccaacag caccatgtac tgggggacgc agccctgaaa aggggggggg 2220 gctaaagccc cccccccttg aacccccccc tgggggggat tcccccccag accccccctt 2280 taaatagcac tcaataaa 2298 //