ID AF389462; SV 1; linear; genomic RNA; STD; VRL; 4164 BP. XX AC AF389462; XX DT 19-JUL-2001 (Rel. 68, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Lymantria dispar cypovirus 1 segment 1, complete sequence. XX KW . XX OS Lymantria dispar cypovirus 1 OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Cypovirus. XX RN [1] RP 1-4164 RA Rao S., Shapiro M., Lynn D., Hagiwara K., Blackmon B., Fang G., RA Carner G.R.; RT "Identification of dsRNA electrophoretypes of two cypoviruses from a dual RT infection in gypsy moth, Lymantria dispar"; RL Unpublished. XX RN [2] RP 1-4164 RA Rao S.; RT ; RL Submitted (08-JUN-2001) to the INSDC. RL Dept. of Entomology, Clemson University, Room 113 Long Hall, Box 340365, RL Clemson, SC 29634, USA XX FH Key Location/Qualifiers FH FT source 1..4164 FT /organism="Lymantria dispar cypovirus 1" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:165803" FT CDS 40..4041 FT /codon_start=1 FT /product="putative major core protein" FT /db_xref="GOA:Q91IE1" FT /db_xref="UniProtKB/Swiss-Prot:Q91IE1" FT /protein_id="AAK73520.1" FT /translation="MHSTTNNSNKRNNEEKHKQPEANGSADNGEGASGTRNQTAGDTTP FT EAGTRNETEAGAGARGQTDGASRSGTNAKVATASSARQMDMEKAAETTSTIENVNDVGI FT MQQKKPPTVIQSRTDVFNEQFANEALHPTTKVIFNGLDVNTEVQPLSDDFEQISDPKGY FT LTYSVKYEDQFAKKDKLRASEADDRIVGPTVNLFKYGSAVVNIDLNQDFFDTTTGINLT FT KGILLVQDLLVPIGVTAGAEQSSEYVSGLLMVLFKVMTDNRLVIVGETTTPISNTLSTV FT VNNILRTTYHNNVGINPALLRDFTHVNWLNQDITNMLQQAGTRFGLGLTATRLDYVRLV FT KTIVGYALDIDHFAASVLNINLRALMEANVTADDRIKALQAHSMISTQFHGPNQGALRP FT ELAFDHDHVIRCLMLAAANYPRLEGIIVQINTGYVASTNVIRPVSEKRYFPENLEQNQS FT AARLVSAVKARASEADISSIHLAIAREVSPMFNVHELKKIAESFEDPSSIVVVLEFILF FT SLFFPTEFNRIKGDIQNVLLLFFSRWYPVEYGIFIQRGATYTINAAGEFEFSGRNEKWD FT QSSYLSEHFPALFSDVPLAGANTIIAIMRLFTPQGFLRTDDLAIAANFPRASRNPQTYI FT PYTNQRGTVTNEFASRFRTIVATLANVVNERAVQDDMQKATRSCTKQWLRHLETQFDNI FT AVAHTDHLSVVYATMSNFMLNFTNNFSGNHATFKPEQYVITSPEGSYKPIMERQGETVD FT GLTIIDTSIVWPILCQCTYPLVRQSGKGVDAVSIMEEIVYPDPGTTLSQSLSVAQILSK FT LTLPDAFINMILSGGDSVAMRTYQTEANDELDEGIRMTTYDQYLSHIRERLHITNVPDP FT IYITGASTPDQIAASVQATHVAVVLYQNGVINGPASTYLRENEVLVVMPDYSNVAARFV FT YANAQMNNNRYHESVLEIADIFDQADFIQTDNAVRRLRALMPTLSTSQIRHAIERIAQI FT TNVDSTDYGKLTLRFLGTLTRPLKMQNAQIRRIRPDGTVLRYDDQIDIEAFRWSRYFLD FT ELQLRRLAVGLRLIANPRIARRFNGVRIMYLTDDDPDPDFVPAIPEGYVAVQYAHRLFS FT SSLANKRNRVTYTHPPTGMAYPSPTGRPHVHLTINERAGMSKLVADNIIASVIKSNWVV FT DILDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRPEPSAFDPPASGE FT DIRLIYPLQPISVARSMRAIVNHNEVDRPRGAVAPSSYEMDTGTLSRNGDLLYSPVENG FT QAGIPKLEVDHISFSNVVSMMTSNIRTGDDMAVERVNPSDIRAINIRNA" XX SQ Sequence 4164 BP; 1297 A; 879 C; 925 G; 1063 T; 0 other; agtaaagggt atgtctatac cataaagtag agccaaacga tgcacagtac taccaataat 60 tccaataaac gaaataatga agagaaacat aaacaaccag aagctaacgg cagtgcagat 120 aatggagaag gagcgtcagg aacacgcaat caaacagctg gagatactac gcctgaagcg 180 ggaactagaa atgaaacgga agcaggtgca ggcgctagag gacagactga tggcgcgagc 240 cgtagtggaa caaatgcaaa agtagcaact gcaagtagcg caagacaaat ggatatggaa 300 aaggctgctg agacaacgtc taccattgaa aacgttaatg atgtgggaat catgcaacag 360 aagaaaccgc caactgtcat acaatctaga acagacgtat ttaacgagca attcgccaat 420 gaagctcttc atcctacgac aaaggttata ttcaatggtc ttgacgtgaa tactgaggtt 480 caacctctaa gtgacgattt tgagcagatt agtgacccta aaggctatct gacttatagt 540 gtgaagtatg aggaccagtt tgcaaagaag gataagttgc gtgcgagtga agcagacgat 600 cgtatcgttg gaccaactgt caacctgttc aagtatggat cagctgtcgt aaacatagac 660 ttaaatcagg atttctttga cacgacaacg ggtataaatc tgaccaaagg tattcttctt 720 gtacaggact tacttgtgcc tatcggtgtt actgctggag ctgaacagtc gtctgaatat 780 gtgagtggat tgctaatggt gcttttcaaa gttatgacgg ataataggct ggttatcgtg 840 ggtgaaacta caacaccgat cagtaataca ttgtcgacag ttgtgaacaa tatcctgaga 900 acaacctatc ataacaatgt tggtattaac ccagcactat tgcgcgactt tacgcacgtg 960 aactggctaa accaagatat tacaaatatg ctacaacaag cgggaacaag gtttggttta 1020 ggtttgactg cgacgcgctt agactatgta cgtttggtga aaacaatagt cggatatgcc 1080 ttggatattg atcatttcgc agctagtgtg ctaaatatta acttgcgtgc actcatggag 1140 gccaatgtaa ctgccgatga caggataaag gcattgcaag cacattcaat gatatctaca 1200 cagttccacg gaccaaatca aggtgcgtta cgtcctgaat tagcgtttga tcatgaccat 1260 gtaatacgat gcttaatgtt agcggccgct aattatccaa gacttgaggg gatcatagtc 1320 cagataaaca cgggttacgt cgcatctact aacgtaataa ggccggtatc agagaagaga 1380 tattttcccg agaatttaga gcaaaatcag tcagcagcac gtcttgtctc agctgtaaaa 1440 gcaagggcat cagaagcaga tatatcttca atccatcttg caatagcgag agaggtgtca 1500 ccaatgttca acgttcatga gttgaagaaa atagcagaat cattcgaaga tccgtcctcc 1560 atagtagtag tgcttgaatt catccttttc tctttattct ttccgactga gttcaatcgt 1620 attaaaggtg atatacagaa tgtattgcta cttttctttt ctagatggta tcctgttgaa 1680 tatggaattt tcatccaacg aggagcaacg tatacgatta acgctgcagg tgagtttgaa 1740 tttagtgggc ggaatgagaa atgggaccag tcatcctatc taagcgaaca cttcccagca 1800 ttgttctcag atgtaccgtt agccggcgcg aacactataa ttgcgatcat gcgcttattt 1860 acaccacagg gtttcctacg tacggatgac ttagcaatag cagcgaactt ccctagggca 1920 tcacgaaacc cgcaaacgta tataccgtat acaaatcagc gaggaacagt cacaaatgaa 1980 tttgcgtcac gatttaggac aattgtagct accttagcca atgtggtgaa cgaacgagca 2040 gtccaggatg atatgcagaa ggcgactcgt tcatgcacta aacaatggtt aaggcatctc 2100 gaaacccagt tcgataacat cgccgtcgcc catacagatc acttatcagt agtatacgct 2160 acaatgtcca acttcatgct caatttcacg aacaattttt cgggcaatca tgcgacattc 2220 aagccagagc aatatgtcat aacatcaccc gagggtagtt acaagcctat aatggagaga 2280 caaggagaga ctgttgatgg attaactatc atcgatacgt cgattgtttg gcctatatta 2340 tgtcaatgta cgtacccact agtcaggcag agcggtaaag gtgttgatgc agtcagtata 2400 atggaagaga ttgtgtaccc tgatcctggc acgacgctat ctcagtcact ttccgttgct 2460 caaatcttat ctaaactcac gttgcctgac gcatttatta acatgatatt atctggtgga 2520 gacagcgtag ctatgcgcac ttaccaaaca gaagcaaatg atgagcttga tgaaggtata 2580 agaatgacta cgtacgatca gtatctttca cacatacgtg aacggttgca tattacgaac 2640 gtccctgatc caatatacat aacaggtgca tctacaccag accagatagc agcgtcagtc 2700 caggcgacgc atgttgcggt tgtactctat caaaacggag ttattaatgg gccagcatct 2760 acgtatttac gcgagaatga ggtattggtg gtcatgccag actattctaa cgtcgcggct 2820 cgtttcgttt atgccaatgc tcaaatgaat aacaaccggt accatgagag tgtgttagag 2880 atagctgata ttttcgatca agcagatttt atacaaacag acaacgcggt acgtcgacta 2940 cgagcattga tgccaacact ttcaacgagc cagattcgac acgctatcga gcggattgcc 3000 cagattacta atgttgacag cacagattat ggtaaactca cattacgctt tcttgggacg 3060 ctgacacgcc cgctcaaaat gcagaatgca caaatacgta gaatcagacc cgatggtaca 3120 gtactcagat atgatgacca aattgacatt gaagcattta gatggagtag atactttctt 3180 gatgaactac aattgcgaag attagctgtg ggactgcgat taatcgccaa cccacgcatc 3240 gctagacgtt tcaatggagt gagaataatg tacttaacag acgatgatcc tgatcccgat 3300 ttcgtacctg ctatccctga aggctatgtc gcagttcagt acgcgcaccg actgttctct 3360 tcctctcttg ctaataaacg caatagagta acgtatactc accctccaac tggaatggca 3420 tacccatcgc ctaccggtcg accacatgta cacctgacga ttaacgaacg agccggcatg 3480 agtaagctag tggctgataa cataatagct agtgtgatca agtccaactg ggtggttgat 3540 atcctagata ttgagtacac tgcagaagtg atgacgccta gcgaagggta tacccaacat 3600 gtcgacgcgg agagtattat gactgcacct aaaggtaaat tattccactt gcaatttatg 3660 gacggcttac tacgacccga accaagtgca ttcgacccac cagcttcagg agaagatatc 3720 agattaatat accccctaca gccaatatca gtcgcgcgtt ctatgcgtgc aatagtcaac 3780 cataacgaag ttgatcgacc aagaggtgct gtcgctccta gttcatacga gatggataca 3840 ggtacgttat ctaggaatgg tgatttgctt tacagcccag tagaaaatgg acaagctgga 3900 ataccaaaat tagaagtcga tcatattagc ttctcaaatg tagtatccat gatgacatcg 3960 aacatacgta caggcgacga tatggctgtg gagcgcgtaa atccaagtga tatacgtgca 4020 attaatatac gtaacgctta agtcaaacta atataatgta atcatttaat gtagctctca 4080 ttactagttt aagaattcat tggacgtaca ggatgttccc gggaggttct atggtagatc 4140 ctcattcata cacgaccgtt agcc 4164 //