ID AF389453; SV 1; linear; genomic RNA; STD; VRL; 4056 BP. XX AC AF389453; XX DT 17-JUL-2001 (Rel. 68, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Lymantria dispar cypovirus 14 segment 2, complete sequence. XX KW . XX OS Lymantria dispar cypovirus 14 OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Cypovirus. XX RN [1] RP 1-4056 RA Rao S., Shapiro M., Lynn D., Hagiwara K., Dean R., Carner G.R.; RT "Identification of electrophoretypes of two cypoviruses from a dual RT infection in gypsy moth, Lymantria diapar"; RL Unpublished. XX RN [2] RP 1-4056 RA Rao S.; RT ; RL Submitted (07-JUN-2001) to the INSDC. RL Entomology, Clemson University, Clemson University Dept. of Entomology, RL Room 113, Long Hall, Box 340365, Clemson, SC 29634, USA XX FH Key Location/Qualifiers FH FT source 1..4056 FT /organism="Lymantria dispar cypovirus 14" FT /segment="2" FT /mol_type="genomic RNA" FT /db_xref="taxon:165429" FT CDS 261..3950 FT /codon_start=1 FT /product="putative major core protein" FT /db_xref="UniProtKB/TrEMBL:Q91IF1" FT /protein_id="AAK73088.1" FT /translation="MSNTITYATESSGDIQSISTISDIRKMTFNEQFDSGQTEMVFRQI FT FQTLDLNAIRKQNYAPFVYTDSPKGYLTYKVFILPKYADNTRALTDPITDAIVSETLNT FT FKYGTVSADIIYNQELFEKEFGLSFKHDVPVAEGVLTPMSTVSVPNHVYEMFMGKIMTL FT FHVMEDTRIAIAQPKAEVNGAISPSISAQIQKKFNDPPGVNPALMVASTKLPWLVRDLA FT EMMARGEFKYQLGVINEDKDEVLLVRHKLTVCQNIDHFAATVINGNILELESNSTTNNE FT RRNEMLAHCSLGSNVTAPDLSKYRPELRPNPRHDLRVLLLAAIKHKGVERLILEINTRY FT VERSNVIRLTTDRQYYPKDMPATSETQLLMKAVMSRVAEADETLVWQYMAREVSPNLSL FT KKMEEIDEDFGTITSIIVIYELIMFCWLFPNTFESIKGSVQNVLLRFFAKWYPAEYEIF FT INTYGVTYIVNAAGAEEYSRKNETWEQEQYVTNEFPALFGNTQFANCPTIRMIMKNFKP FT QGFMRLDTQAVAAKMPRLSRNPGHYIPHKQSAHSIVNAFESAHRNMVQDLVSCTQVYVT FT RQGIQKATRDRLVSWFNHMDSRVGKLSPSITNHWSVMYASMANHMLNFTENFNGDYSRY FT KPLNYAVVGVGGHPVPLREGIFEYSDGINYVNTRIIWSMLCQSTTPFMRQQGDGQDKVR FT VHEDIVFPSGVENYESHLAVMQMIRKMVVPDAFVSYILSSAYTMQVRKYDIAENQTVSI FT ITIREFQERMKERLVVHDLPNPLEVAANTTAEQIAEYLNGPLRVIRVPPGRILLTAMVT FT NILARNALIILDNFDNVRQSFVNQPPYNVDNDDYAIEYQSLNAYVTMRLRAIDPNLRLL FT NSYLPPLSQSQVRNMMEYVSQRLGQSTGDFNKLLLKHLGEMKRDSRFIDMQLRRLNFDK FT AVQRFDRAIDPDAFQDSEFFLTDGQYRRLQIALKMCFNDRLDNMRTGVRILEKEMIAFE FT PDEIPTIPDGYIQREYASDNSLFKSQSVNYVTRYVYVTEDGVNVAQFSERPKVHLIIKD FT RRKVLPEHYDAILGGIKVAKWIVDVEDVKYISQIIPLNVEAIGPSYEDILNPTSHVETV FT HFIQFQDGLMQPARDPYELPEVGRKVKTILPLTQISNSRSMRALVRTENGTNIPGAQSP FT HPCEMDTGTLLNGILFYSDDTNKLEHQNVSMTNPIIEYSKNIKPDEDLPMKITPPQDIL FT RIIL" XX SQ Sequence 4056 BP; 1327 A; 747 C; 898 G; 1084 T; 0 other; agaatcattc cgtctctaga tgaagactaa taaacgatgt gtccgaaaaa acgataaaaa 60 cgcttaaaga tgatgaatca atcaagaaaa acaaaccaaa cgcaggaagt gcaacaccag 120 aagaggcaaa tacaagcgga agcaatgtac cagctggaac agtccaagat agcgcagaat 180 ctgaagcgaa acttgttgtt gcggcagcta agccagttag cgaaggagcg tcagcgacaa 240 gcggcaatga taatgcgaaa atgagtaata ctataacgta tgcgacagag agtagcggcg 300 atatccaatc aatatctact ataagtgaca tccgcaagat gacttttaat gagcaattcg 360 atagcggtca aactgaaatg gtttttagac aaatattcca aaccctagac ttgaatgcga 420 ttagaaagca aaactatgcg ccttttgttt atacagattc gccgaaagga tatctaacat 480 acaaagtttt catacttcca aaatatgctg ataacacacg cgcgctaacc gatccaatca 540 cagacgcaat agtatctgag accttaaata cttttaagta cggtaccgtc tctgctgata 600 tcatttacaa tcaggagtta ttcgaaaagg aatttggttt gtcttttaag cacgatgtac 660 cagtagctga aggagtgttg acgcccatgt cgacagtgtc agttccaaac catgtttatg 720 agatgtttat gggtaagatc atgacattat ttcatgttat ggaagatacg cgcattgcga 780 tagcgcagcc taaagcagag gttaatggtg ctatatcgcc aagcatttct gcacaaatac 840 agaagaagtt caatgatcca ccaggcgtca atccagcatt aatggtcgca agtaccaaat 900 taccgtggtt agtgagagat ctagcggaaa tgatggcgcg aggcgaattc aaatatcaat 960 tgggagtgat aaatgaggat aaggatgagg tattgcttgt tcgtcacaaa ctaaccgttt 1020 gccaaaacat cgatcatttc gcggctaccg ttattaacgg taacatattg gaattggaaa 1080 gtaattcaac tacaaataat gaaagacgta atgaaatgtt agctcattgc tctctcgggt 1140 caaatgtgac agcgccagac ttatcaaaat acagaccaga attacgtcca aatcctcgtc 1200 atgacttacg agttttatta ttagcagcga ttaaacataa aggagttgag agattgatac 1260 tggagattaa tacacgatac gtcgaacgta gcaatgttat cagattgaca accgataggc 1320 aatattatcc aaaagatatg ccagctacga gtgaaactca actattaatg aaggcggtaa 1380 tgtcacgtgt tgctgaagcc gatgagacgc tggtatggca gtacatggcg cgagaagtat 1440 ctccgaactt aagtcttaaa aagatggaag agattgatga agactttgga acgattacga 1500 gcataatagt aatctatgag cttatcatgt tttgctggtt gtttccaaac accttcgagt 1560 cgattaaagg ttctgtgcag aatgtgcttt tacgattttt tgctaagtgg tatccagcgg 1620 aatatgagat atttattaat acgtatggcg tgacatatat cgttaatgca gctggtgcgg 1680 aggaatattc aaggaagaat gaaacctggg agcaagaaca gtacgttacc aatgagttcc 1740 cagcattatt tggaaacaca caatttgcta attgcccaac aattagaatg attatgaaaa 1800 atttcaaacc tcagggattc atgcgcctag atacgcaagc tgtcgccgct aaaatgcctc 1860 gattgtcaag aaatccaggt cattacatac cgcacaaaca gagcgcgcat agcatcgtaa 1920 acgcctttga gtccgcacac agaaatatgg tgcaagatct ggttagctgt acacaagtat 1980 atgttactag acagggtatt caaaaagcta cgcgtgatag actcgttagc tggttcaatc 2040 acatggatag cagagttggc aaattgtctc cgtcaattac taatcactgg tctgtgatgt 2100 atgcaagcat ggctaatcac atgctaaatt tcactgagaa cttcaatggt gattatagta 2160 gatacaagcc acttaattat gcagtagtcg gagtcggcgg tcatccagtt ccattgcgcg 2220 aaggaatatt tgagtacagt gatggaatta attacgtaaa cactcgtatt atttggtcta 2280 tgctatgtca atcgacgact cccttcatgc gtcaacaagg agatggacaa gataaagttc 2340 gcgtgcacga agatatagtg tttccgagtg gagttgaaaa ttacgagagt cacctagcag 2400 tgatgcagat gataagaaag atggttgtac cggatgcatt cgtgtcatac atattgtctt 2460 cagcatatac aatgcaagtt cgtaaatatg atatcgcgga aaatcaaacg gtatcaatca 2520 ttactattcg cgagttccaa gaaagaatga aagagagatt ggtggttcat gaccttccca 2580 atcctttaga agttgcggct aacacaacag ctgagcagat agctgaatat ctcaatggtc 2640 cacttcgtgt gattcgcgtc ccacctggta ggattttatt gaccgctatg gtaacgaaca 2700 tcctcgcgag aaatgcgctg attattttag acaattttga caatgtgaga caaagttttg 2760 tgaatcaacc tccatacaac gtcgataatg acgattatgc tattgagtat caatcattga 2820 acgcgtacgt aacgatgaga ttgagagcta tagacccgaa tcttcgttta ctgaacagct 2880 atttgccacc actttcacaa tcgcaggtcc gcaatatgat ggagtacgta tcacaacgac 2940 ttggtcagtc tacgggtgac ttcaacaaac ttctattgaa gcatttaggc gaaatgaaga 3000 gggatagccg ttttatagat atgcaattgc gacgactgaa tttcgataaa gctgtccagc 3060 ggttcgatcg cgctattgac cctgatgcat tccaggatag tgaatttttc ttaactgatg 3120 gacagtatcg taggctgcag atagcgctaa agatgtgctt taacgataga ttagataaca 3180 tgcgcactgg cgtcagaata ttagagaagg agatgatagc atttgagcca gatgaaattc 3240 cgacgatacc ggatggttac atccagcggg aatatgcaag tgataattca ttattcaaat 3300 cccaaagtgt taactacgtc actagatatg tgtacgtcac tgaagatggt gtaaatgtag 3360 cgcagttcag tgaaaggcca aaagtccatc taattataaa ggataggagg aaagttttgc 3420 cagagcatta tgacgccata ttgggcggaa ttaaagtcgc gaagtggata gtggacgttg 3480 aggatgttaa gtatattagc cagataatac cgctgaatgt tgaagctata gggccatcat 3540 atgaagacat acttaatcca acaagtcatg ttgaaacagt tcattttatc caattccagg 3600 atggtttgat gcaaccagca cgtgatccgt acgaattacc tgaagttggt cgaaaggtaa 3660 aaacgatttt accattaacg caaatatcaa attcgaggtc gatgcgagct ttggtcagga 3720 ctgagaatgg tacgaatata cctggagcgc aatctcctca tccatgtgag atggacacgg 3780 gaactctact gaatggcatt ttgttttatt cggatgatac taataaactt gagcatcaaa 3840 atgttagtat gactaacccg ataattgagt attctaagaa tataaaacca gacgaagatc 3900 taccgatgaa gataactccc ccacaagata tattaaggat aatactttaa aatgtgttat 3960 catttaacac atagtcatct agcgttattt tagttttatg ttaggatagg ttggattggt 4020 ccgattctct gtaacggacg gaggaaaacg tcagct 4056 //