ID AF389452; SV 1; linear; genomic RNA; STD; VRL; 4329 BP. XX AC AF389452; XX DT 17-JUL-2001 (Rel. 68, Created) DT 29-MAY-2003 (Rel. 75, Last updated, Version 2) XX DE Lymantria dispar cypovirus 14 segment 1, complete sequence. XX KW . XX OS Lymantria dispar cypovirus 14 OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Cypovirus. XX RN [1] RP 1-4329 RA Rao S., Shapiro M., Lynn D., Hagiwara K., Dean R., Carner G.R.; RT "Identification of electrophoretypes of two cypoviruses from a dual RT infection in gypsy moth, Lymantria diapar"; RL Unpublished. XX RN [2] RP 1-4329 RA Rao S.; RT ; RL Submitted (07-JUN-2001) to the INSDC. RL Entomology, Clemson University, Clemson University Dept. of Entomology, RL Room 113, Long Hall, Box 340365, Clemson, SC 29634, USA XX FH Key Location/Qualifiers FH FT source 1..4329 FT /organism="Lymantria dispar cypovirus 14" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:165429" FT CDS 589..4275 FT /codon_start=1 FT /gene="pol" FT /product="RNA dependent RNA polymerase" FT /note="RdRp" FT /db_xref="GOA:Q91IF2" FT /db_xref="InterPro:IPR007097" FT /db_xref="UniProtKB/TrEMBL:Q91IF2" FT /protein_id="AAK73087.1" FT /translation="MTTDIKYTPTPEIIQCGYVFDPTKVQSLKDERFRLLSSKSDEGDL FT NKSIFNYIKNESPASKHWIGKDVNGHVLRVECLIPIDITQPPDFDLSMYPLDDSETMFA FT DDHDIDYLRNCKVSSLMLALGETEREQKLIAELKFLMTAKHCQTRVAKVWKQLLIVVKT FT LDDAFKTKEYPLRYFIAQLFCRGINFPFYQKRGERQHTFVFESTDVSSVLPLLTYTCMS FT IGTAIMTGVLSHVESVVAMNNMLEMARTSFVDEKLKYKSIARNWLTEALHNLGDTLIPV FT WNASGDIRSTVMKNTNESAFVRSQIEADREKRKQLNSVMTAYLGHVLSKCNSYDSIRRY FT YTAVRVMTNDGAYLSTLTELSLDKAVQPIASMTAVQRPAVLEHDASGRAYRQTYTSGEL FT SAAWNYLRPFASEIATKLTKTNLDELWLGFITTSSPGRKLEETILRNLHVEVQKWSGKS FT KIVMEAVLAPKYRDMSRYTDALTTISQLVERIQIDRRQRAISGLSNERLFLSFLSYVIG FT KEIYNLNSNAAQGKQAGNALDIQDMLYLTTLRNTIQSSIDISGMDASIQPEIKELYNTL FT TLETTGHMNTSKFGPFMTKTMEIKDTKTGSSRRDKVNAAKQAIMYEIANTQTSTTYNSK FT IFGEIKSGEGTYPSGRADTSTHHTVLLQAILRGNELRRCSEGKASSLIDMRILGDDVRL FT TYHGSEDLCIKHANEDAEALNKCGFKVTQEYSKNSVTLLQQLVVNGSFWGFPDRISLWT FT RERQKGMYRYDESAKEATALCDDMMSRIPRPEGLKMLLFNILFLGYGRLNMAVSRPFVN FT EFVKLIGKHVQYELHSDNLAYKTRLISVYLPFYWSFMAGGGELQPYPFMRSDGSYTPDH FT SMYSARGPYLRRNLYDISGAETSIINEEMVKLDHELLTKYDVLATQLFMDLNFLNLKVE FT AKRELLPPNEIERLASDLEALGNADARVRSKIAYGSLKREMADIPKGIVYGYDLYTKIE FT QTALDQESTEEETKLVSMRMLMNLRKYANNRYIRAHDDDVLHEYCFNRRAERANFLPMM FT KHLKNFSIAANMEPFSDGWALLGYLGLMDPLGSELRAELASIRGGFHKMSYADPRFKTG FT FRIYNENARLLETFFVMIGADGNEQEAMRRAFAYFSMYGRIRYEYIQSPRQLFFINNSP FT IGAARFLVGTEYNQSSSAVQALFLTYTYLHILSNISDYSGELLELRLSDKLRKHLRIQQ FT VHG" XX SQ Sequence 4329 BP; 1395 A; 764 C; 936 G; 1234 T; 0 other; agaactttcc caacactcgt tccgaattct gatactcaat tgcatttcga atcaatgacg 60 tttacattta acctgattgc gcgctacata tcacactata aaactactat tataacgacc 120 gttcatctaa cagtgatctt gtgcgatttg acgttgctaa cactcgttag ttcctcactc 180 gtgaacgttc aatcaccagg taactcaacg cgtattgtcg cagtcgagca tatttctcaa 240 gatctttatt tgcaacttga attggcaata tctatcgtaa tattattatt tctattatat 300 acgttttggc gtaacaaaac ttttcaatca tttgctattt atgacgtgta gtggtcatgg 360 gaggcagttg tagttgtcaa ggtgctgaac aacaacaagg attctttgat gctaatgatc 420 caatgcacat gataggtggc gctgctttag taattatcat tttaaccata acttttatgc 480 ttggtcgttg gtttggtaga agaggagcac ttccatcact gccaaaatat cacttaccat 540 catatcagcc accgttactg cctagtggaa actcatcgca taaccgagat gacaaccgat 600 attaaataca cgcctactcc agaaatcatt caatgcggct atgtttttga tccgacaaag 660 gtgcaatcgt tgaaggatga acgtttcaga ttattatcat cgaaatcaga tgaaggtgat 720 ttaaataaaa gtatcttcaa ttacattaag aatgaatcgc cggcatccaa gcattggatt 780 ggtaaagatg ttaatggaca tgttctaaga gtagaatgtt tgatcccaat tgacataacg 840 cagccgcctg actttgatct atctatgtat ccgttagacg atagtgagac gatgttcgct 900 gatgaccatg acatagatta cttacgtaat tgtaaggtga gtagtttgat gttggcattg 960 ggtgagacag agcgtgaaca aaaattgatc gcagaactga agtttttgat gactgcgaaa 1020 cattgtcaaa caagagtagc taaagtctgg aaacagttat taattgtcgt caaaacgctg 1080 gatgacgcct tcaaaacaaa agaatatcca ctacgatatt tcattgctca actattctgt 1140 cggggcataa atttcccatt ttatcaaaag agaggcgagc gacagcatac gtttgtattt 1200 gaatcaactg atgtatcatc ggtattacca ctattaacat atacatgtat gtcaatagga 1260 acagctatta tgacaggagt gttaagtcat gttgaaagtg tcgttgccat gaataatatg 1320 ctagaaatgg cacggacgtc atttgttgat gagaaattaa aatataaaag catagcaaga 1380 aattggttaa ctgaagcatt gcataacttg ggcgacactc ttatccctgt gtggaatgcg 1440 tctggtgata taaggtcaac ggtaatgaaa aatactaatg aaagcgcctt cgttcgttca 1500 caaatagaag ccgatcgtga aaaacgtaaa cagttaaata gcgtgatgac tgcctattta 1560 ggtcatgttt taagtaaatg taattcgtat gatagtatta ggagatatta tactgcagtt 1620 agggttatga cgaatgatgg agcatatttg tcaacgttaa cagagctttc attagataag 1680 gcggtgcaac caattgcaag tatgacggcg gtgcaaaggc cagcagtttt ggagcatgat 1740 gcatctggac gcgcgtatag acaaacgtat actagtggag agttaagtgc agcatggaac 1800 tatcttagac cgtttgcttc cgaaattgca acgaaattaa caaaaacgaa ccttgatgaa 1860 ctatggttag gctttataac cacatcatca ccaggacgaa agttagaaga aacaatatta 1920 cgtaatttgc atgtggaggt acaaaaatgg tccggaaaat ccaagattgt catggaagca 1980 gttttagcgc caaaatatcg cgacatgtct agatatactg atgcgctcac cactatcagc 2040 cagttagtag agagaattca gattgaccga cgacagcgcg ctatctcagg tctatctaac 2100 gagcgattgt ttttatcatt cttgtcatac gttattggaa aggaaattta taacttaaat 2160 tcaaacgctg ctcaaggcaa acaagcgggt aatgcgttgg atatccaaga tatgctatat 2220 ttaacaaccc tacgtaacac catccagtcg tctattgaca tctcaggtat ggacgcctct 2280 atacaaccag aaattaagga gttatataat acgttgacat tagaaaccac gggacatatg 2340 aatacatcta agtttggacc cttcatgact aaaacaatgg agattaaaga tacaaaaaca 2400 ggtagtagtc gacgtgacaa ggtaaatgca gctaagcaag caataatgta tgagatagct 2460 aacacccaaa catctactac ttataatagt aaaatatttg gagagataaa gtcaggtgaa 2520 ggaacatatc catcaggtcg agccgataca tcaactcacc atacagtact gttgcaagca 2580 attttaaggg gtaacgaatt gcgacgatgc tctgaaggta aagcaagctc attaattgac 2640 atgcgtattt taggtgacga cgttcgatta acttatcacg gctctgaaga tctatgtatt 2700 aaacatgcca atgaagatgc tgaggcgtta aataagtgtg gtttcaaagt gactcaagag 2760 tattcgaaaa attcagttac tttacttcaa caactagttg taaatggatc tttttggggg 2820 tttccagatc gtatttcctt atggacgcgt gagagacaaa agggaatgta tagatatgat 2880 gagagcgcga aagaggcgac ggcattatgc gacgatatga tgtctcgaat tccacgacca 2940 gagggactaa agatgttatt gtttaatatt ttgtttttgg gatatggtcg cttgaatatg 3000 gcagtatcca gaccattcgt aaacgaattc gttaaactaa tcggtaagca cgttcaatat 3060 gagttacatt ccgacaattt ggcttacaaa acaagattaa tctccgtgta tctaccattt 3120 tattggagtt tcatggcagg tggcggtgaa ttacaaccgt atccatttat gcgatctgac 3180 ggtagttata ctcctgatca ttcaatgtat tcggcaagag ggccctattt acgtagaaat 3240 ttatatgata ttagtggagc cgaaacctca attatcaacg aagaaatggt gaaacttgat 3300 cacgagttat taacgaaata cgacgtgtta gccacccaac ttttcatgga tctaaacttt 3360 ctgaacttaa aggtagaggc taaacgagaa ctacttcctc caaatgagat tgagagatta 3420 gctagtgact tagaagcgtt aggcaatgct gatgctcgcg tacgatcgaa gatagcatat 3480 ggtagtttga agagggagat ggcggatata ccgaagggca ttgtttacgg atacgatctt 3540 tatactaaaa tagagcagac ggcattagat caggaatcga cagaagaaga gactaagtta 3600 gtaagtatgc gaatgttaat gaacttgcga aagtatgcta ataacagata catccgagca 3660 catgatgatg acgtgctaca tgaatattgc ttcaatagac gagcggaacg tgctaatttc 3720 ttgccaatga tgaagcacct caaaaatttt agcattgcgg ctaatatgga accattttcg 3780 gatggatggg cgctacttgg ttatctcggg ctaatggatc ccttaggttc ggagttgcgg 3840 gctgaactgg cttcaattcg aggaggattt cacaaaatga gttatgctga cccaagattt 3900 aagacgggat ttaggatata caacgagaac gcgagattat tagaaacttt cttcgtaatg 3960 atcggtgccg acggaaatga acaggaagca atgcgtagag cattcgcata ctttagtatg 4020 tatggtagaa tcagatatga atatatccag tcgccgagac agttgttctt cattaataat 4080 tctccgatag gggcagcacg tttcttggtg ggtacagagt ataaccagtc cagcagtgca 4140 gtgcaagcat tattcttaac gtatacatac ttacatatac tgtctaacat atcggattat 4200 tcaggcgaac ttttagagtt acgtctgtcc gataaattac gtaaacatct acgaattcag 4260 caggtgcatg gataggaatt ggatattagg aacgttcata gaacggtaag agggggaaga 4320 ctttcagct 4329 //