ID AF123433; SV 1; linear; genomic DNA; STD; VRL; 7410 BP. XX AC AF123433; XX DT 04-NOV-1999 (Rel. 61, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Bovine enterovirus isolate SL305, complete genome. XX KW . XX OS Bovine enterovirus strain SL305 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC Picornaviridae; Enterovirus. XX RN [1] RP 1-7410 RX DOI; 10.1016/S0378-1135(99)00062-0. RX PUBMED; 10501163. RA McCarthy F.M., Smith G.A., Mattick J.S.; RT "Molecular characterisation of Australian bovine enteroviruses"; RL Vet. Microbiol. 68(1-2):71-81(1999). XX RN [2] RP 1-7410 RA McCarthy F.M., Smith G.A., Mattick J.S.; RT ; RL Submitted (26-JAN-1999) to the INSDC. RL Queensland Department of Primary Industries, Queensland Agricultural RL Biotechnology Centre, level 4, Gehrmann Laboritories, Research Road, RL University of Queensland, St Lucia, Brisbane, Queensland 4074, Australia XX DR RFAM; RF00048; Entero_CRE. DR RFAM; RF00229; IRES_Picorna. DR RFAM; RF00386; Entero_5_CRE. XX FH Key Location/Qualifiers FH FT source 1..7410 FT /organism="Bovine enterovirus strain SL305" FT /isolate="SL305" FT /mol_type="genomic DNA" FT /note="complete nucleotide sequence of BEV K2577 was FT determined; the sequence reported here excludes the poly(A) FT tract and the 5'- and 3'-termini have not been confirmed FT using RACE" FT /db_xref="taxon:106608" FT mat_peptide 818..1024 FT /product="VP4" FT CDS 818..7342 FT /codon_start=1 FT /product="polypeptide" FT /db_xref="GOA:Q9PYB6" FT /db_xref="HSSP:1BEV" FT /db_xref="InterPro:IPR000081" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR002527" FT /db_xref="InterPro:IPR003138" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR014838" FT /db_xref="UniProtKB/TrEMBL:Q9PYB6" FT /protein_id="AAF05694.1" FT /translation="MGAQMSRSTAGSHTTGTYATGGSTINYNNINYYSHAASAAQNKQD FT FTQDPSKFTQPIVDVVKETAVPLKSPSAEACGYSDRVAQLTLGNSTITTQEAANICVAY FT GTWPSKLSDHDATSVDKPTEPGVSAERFYTLRSKAWEANSPGWYWKLPDALNNTGMFGQ FT NAQFHYIYRGGWAIHVQCNATKFHQGTLLVLAIPEHQIATQEQPQFDRTMPGDAGGTFQ FT EPFWLEDGTSLGNSLIYPHQWINLRTNNSATLVLPYVNAIPMDSAIRHSNWTLAIIPVA FT PLRYAADTTPLVPITVTIAPMETEYNGLRRAIASNQGLPTKPGPGSYQFLTSDEDSTPC FT ILPDFQPTPEIFIPGEVTNLLQIAQVESIVEANNTNDANGVERYVIPVGVQDALDSQIY FT VLKLELGGSGPLSSSLLGTMAKHFTQWSGSVEITCMFTGTFMTTGKVLLAYTPPGGDMP FT RNRDEAMLGTHVIWDFGLQSSITLVVPWISASHYRGVSTDDSLNYQYYAAGYVTMWHQT FT NMVIPPGFPNTAGIIMLVAAQSNFSFRIQKDREDMAQTAALQNDPGKALESAIQKQVAN FT ALVAGTTQSSHSIATDSTPALQAAETGATSTASDESMIETRTVVPTHGVHETSVESFYG FT RSALVGMVTLPSGSRVVNWVIGFREFVQLRAKMSWFTYMRFDVEFTIVATTASSTAAVE FT HRNRFQVMYVPPGAPQPADQDSFQWQSGCNPSVIADVEGPPVQFSVPFMSTANAYSNFY FT DGYARFMDTHPDRYGILPSNFLGLMYFRCLEDTTDNVRFRIYAKIKHTRCWIPRAPRQA FT PYKKRYNLVFDGTTDRICTSRSSLTTLGPFGQQQGAAFVGSYKIVNRHLATYTDWENEV FT WQSYQRDLLVTRVDAHGCDTIARCNCRSGVYYCKSRNKHYPIVVTPPSIFKIEANDYYP FT ERMQTHILLGTGFAEPGDCGGLLRCEHGVMGILTVGGGDLVGFADIRDLLWIEDDAMEQ FT GITDYVQQLGNAFGAGFTAEIANYTNQLRDMLVGSDSVVEKIIRSLVRLVSALVIVVRN FT HQDLVTVGATLALLGCEGSPWKWLKRKVCQILGINMAEKQSDNWMKKFTEMCNAFRGLD FT WIAAKISKFIDWLKQKILPELKERAEFVKNLKQLPLLEAQVNTLEHSSASQEKQEQLFG FT NIQYLAHHCRKNAPLYAAEAKRVYHLEKRVLGAMQFKTKNRIEPVCALIHGSPGTGKSL FT ATMIVGRKLAEYEGSDVYSLPPDPDHFDGYQQQAVVVMDDLLQNPDGKDMTLFCQMVST FT APFTVPMAALEDKGKLFTSKFVLASTNAGQVTPPTVADYKALQRRFFFDCDIEVQKDYK FT RNGVTLDVAKATETCEDCSPANFKKCMPLICGKALQLKSRKGDGMRYSLDTLISELRRE FT SNRRYNIGNVLEALFQGPVSYKPLRIEVIEEEPAPSAISDLLQAVDNEEVREYCRSKGW FT IIEEKVTELKLERNVNRALAVIQSVSLIAAVAGTIYIVYRLFSGMQGPYSGIGTNYATK FT KPVVRQVQTQGPLFDFGVSLLKKNIRTVKTGAGEFTALGVYDTVIVLPRHAMPGKTIEM FT NGKDVEVLDAYDLNDKTDTSLELTIVKLKMNEKFRDIRAMIPDQITDYNEAIVVVNTSY FT YPQLFMPVGRVKDYGFLNLAGRPTHRVLMYEFPTKAGQCGGVVVSMGKIVGIHVGGNGA FT QGFAASLLRRYFTAEQGQIEYIEKSKDAGYPVINAPTQTKLEPSVFFDVFPGVKEPAVL FT HKKDKRLETNFEEALFSKYIGNVQRDMPEELLIAIDHYSEQLKMLNIDPRPISMEDAIY FT GTEGLEALDLGTSAGYPYVAMGIKKRDILNKETRDVTQMQECINKYGLNLPMVTYVKDE FT LRAPDKIKKGKSRLIEASSLNDSVAMRCYFGNLYKAFHTNPGTISGCAVGCDPETFWSK FT IPVMMDGELFGFDYTAYDASLSPMWFHALAEVLRRIGFVECKHFIDQLCCSHHLYMDKH FT YYVVGGMPSGCSGTSIFNSMINNLIIRTLVLTVYKHIDLDDLKIIAYGDDVLASYPYEI FT DASLLAEAGKSFGLIMTPPDKSAEFVKLTWDNVTFLKRRFVRDARYPFLVHPVMDMSNI FT HESIRWTKDPRHTEDHVRSLCLLAWHCGEREYNEFITKIRSVPVGRALHLPSFKALERK FT WYDSF" FT mat_peptide 1025..1768 FT /product="VP2" FT mat_peptide 1769..2494 FT /product="VP3" FT mat_peptide 2495..3334 FT /product="VP1" FT mat_peptide 3335..3784 FT /product="protease 2A" FT mat_peptide 3785..4081 FT /product="2B" FT mat_peptide 4082..5071 FT /product="2C" FT mat_peptide 5072..5338 FT /product="3A" FT mat_peptide 5339..5407 FT /product="VPg 3B" FT mat_peptide 5408..5956 FT /product="protease 3C" FT mat_peptide 5957..7339 FT /product="polymerase 3D" XX SQ Sequence 7410 BP; 1945 A; 1889 C; 1800 G; 1776 T; 0 other; ttaaaacagc ctgggggttg tacccacccc cggggcccac gtggcgccag tactctggtt 60 cgcttaaaac ctttgtacgc ctgttttccc ctcccttaaa taaattaaga tctctgccaa 120 tgtggggagt agtccgactc cgcaccgata cgtcgcacca gcagaccggt tcgcttagga 180 cccttctgcg gattggtatg agtcccttcc cccctgcaac ttagaagtta gcacaaaccg 240 accaatagcg gcgttgcaac cagcagcgca acggtcaagc acttctgttt ccccggcgca 300 acgcgtcgtt acccgcccaa cctactacgg gaagcccagt atgatcccaa tcgactgcgc 360 agtcgcgttc agccacaacc ccagtggtag ctctgaggaa tggggctcgc cttcccccca 420 cagtgatgtg gtggcttgcc cgcgcgtgtc ctcgggttca ctcactgagt gttcactgca 480 atttcgagta agatctgaag agcctactgt gctaggttgg tcttcctccg gagccgtgaa 540 tgctgctaat cctaacctcc gagcgtgtgc gcacaatcca gtgttgctac gtcgtaacgc 600 gtaagttgga ggcggaacag actactttcg gtactccgtg tttccttatt tcatttcaat 660 atttttatgg tgacattgac tgatatccgt gaatttgcac gcttgcccct gaacattgcc 720 ttgtattact tagtgtcatt ccacaagacc acagaactct cagttgagct catcaacttc 780 gctgtgttcc ttaaccaaat ccacaaacgt acttgcaatg ggagcacaaa tgagcagaag 840 cacagccgga agccacacca ctggtacata cgccactggc ggatcaacaa tcaactacaa 900 caatatcaat tactatagtc atgccgcctc ggcagctcag aacaagcagg acttcacgca 960 ggatccatca aagttcacac agcccatagt ggatgttgtc aaggagaccg ccgttccgct 1020 aaagtcgcca tctgctgaag cctgcggtta tagtgaccga gtggcccaac tcaccctagg 1080 aaatagcacc ataacaacgc aagaggccgc caatatttgt gtcgcttacg gcacctggcc 1140 ttcaaagctg tccgaccatg atgccacgtc cgtagataaa cccaccgaac cgggcgtcag 1200 cgccgagcgc ttctataccc tgcgctctaa ggcctgggag gcaaatagtc ctggctggta 1260 ttggaagctt cctgacgccc tgaacaacac aggcatgttt ggacagaatg cccagtttca 1320 ttacatatat cgaggcggtt gggccataca cgttcagtgc aatgctacca aatttcacca 1380 aggcactctc ctcgtgttgg ccatccccga acaccagatt gccacccagg agcaacccca 1440 attcgaccgt acaatgccag gggatgctgg tggtaccttc caagaacctt tctggttgga 1500 ggacggaact agcttgggta attccctgat ctatccccac caatggatca acttgaggac 1560 gaataactca gccactctgg ttctccccta tgtcaatgcc atcccaatgg attcagcgat 1620 ccgccattca aactggacgc tagccataat cccggtagcg cctttgaggt atgctgcaga 1680 caccacaccg ctggtaccca tcacagtgac gatagctccc atggaaaccg aatacaacgg 1740 tttaagaagg gccatagcct caaaccaagg cctccctacc aaaccgggtc caggttccta 1800 ccagtttctg accagtgatg aggactcaac tccatgcata ctccctgact tccaaccaac 1860 accggagatc ttcatcccgg gtgaagtgac caacctcctt caaattgcac aggtcgagtc 1920 aattgttgag gccaacaaca ctaacgatgc gaatggtgtc gagcggtacg taataccagt 1980 tggtgtgcag gacgccctcg actcgcagat ctatgtgttg aaattagagt tgggtggatc 2040 cgggccactc tcatcatcac tactaggcac aatggccaag catttcaccc aatggagtgg 2100 ttcggtagaa atcacctgca tgttcactgg gacgttcatg accacaggaa aagttctcct 2160 agcatacacc ccaccaggag gcgacatgcc tagaaacaga gatgaggcaa tgctaggaac 2220 ccatgtaata tgggattttg gactgcagtc ttccataacc cttgttgtcc cttggatctc 2280 tgcctctcat tataggggag ttagtacaga tgacagccta aactatcaat actatgcagc 2340 tggctatgtc accatgtggc accagactaa catggtcata ccccccggct tcccgaacac 2400 cgccggaatt atcatgttag tggcagctca gtcaaacttc tcattccgca ttcagaaaga 2460 tcgcgaagac atggcccaaa ctgcagccct acaaaacgac cctggcaagg cgctcgagag 2520 tgctatacaa aagcaagtgg ctaacgcgct tgttgctggt accacccagt cgtcgcattc 2580 gattgcgacg gattcgacgc ctgccctcca ggctgcggag accggagcca cttcaactgc 2640 tagtgacgag agcatgatcg agacgcggac agtggtccca acccatggag tgcacgagac 2700 gagtgtggag agtttctatg gtaggtcggc tctagtcggt atggtcaccc tcccttctgg 2760 atccagggta gttaattggg tcataggttt cagagagttt gtgcagctac gtgccaagat 2820 gtcgtggttc acctacatga ggtttgacgt tgaatttact atcgttgcca caactgcaag 2880 ctccaccgcg gctgttgagc acagaaatag gtttcaggtc atgtatgtac caccaggagc 2940 accacaacca gccgatcagg actcattcca gtggcaatcg gggtgtaacc cttcagtgat 3000 agcagatgta gaggggcctc ctgttcaatt ttcagtcccg ttcatgagca cagccaacgc 3060 atactcaaat ttctatgatg gttacgctag gttcatggat acccaccccg acaggtacgg 3120 tatactaccc agtaacttct tagggttgat gtatttcagg tgcttggaag acaccaccga 3180 caacgtgcga ttccgcattt atgccaaaat caagcacacc aggtgctgga tccctagagc 3240 gcccaggcag gcaccttaca agaaaagata caacctagtt tttgatggaa ccactgacag 3300 aatttgcaca agccgcagct ctctaaccac gcttggaccc tttggccagc aacagggcgc 3360 agcttttgtt ggatcttaca aaatagttaa cagacacctt gccacctaca ccgattggga 3420 aaacgaggtt tggcagtcat accagcgtga tctcctcgtc accagagtgg acgcacatgg 3480 gtgtgatacc atcgccaggt gcaactgtag gtctggggtt tattattgta aatcaaggaa 3540 caagcattat cccattgttg tcaccccacc gtccatcttc aaaatcgaag caaatgatta 3600 ctacccagag aggatgcaga ctcacattct ccttggcact gggtttgccg agcccggaga 3660 ttgcggtggc ctgctccgtt gcgagcacgg ggtcatgggc attcttacag tgggtggtgg 3720 tgaccttgtt ggtttcgccg atattcgtga tttactctgg attgaggatg atgccatgga 3780 gcaaggaatt actgactatg ttcaacaact aggtaatgct tttggagcgg gatttaccgc 3840 ggaaatcgct aattacacca accagcttag ggatatgcta gtaggttcag actcagttgt 3900 ggaaaagatt atcaggtctc tagttagact cgtctcagct ctagtcatag tggtgaggaa 3960 tcaccaagat ttggttacag tcggagcgac cctagccctc cttggttgtg aaggttctcc 4020 atggaaatgg ttgaagcgaa aggtgtgcca gatacttggg atcaacatgg cagagaaaca 4080 gtcagacaac tggatgaaga aattcactga gatgtgtaac gccttcaggg gccttgattg 4140 gatcgccgcg aagatctcga aattcatcga ctggcttaag caaaagatcc tacccgaact 4200 taaagaaagg gccgagttcg tgaagaacct caaacaactc cccttgttgg aggcccaagt 4260 caacacattg gagcactcct cagccagcca ggagaaacag gaacaactgt ttggaaacat 4320 tcaatatcta gcccatcact gcagaaagaa tgcaccactt tatgcagctg aagccaaacg 4380 cgtttaccac ctagagaaac gtgtgctcgg cgccatgcag ttcaagacca agaatcgcat 4440 tgaacctgta tgcgcgctta tacatggatc ccctggaact gggaagtcac tagccaccat 4500 gattgtaggc cggaaattag cagagtatga gggctcagat gtttattccc tcccaccaga 4560 tcctgatcat tttgatggct atcaacaaca agccgttgtt gtaatggatg atttactgca 4620 aaacccagac ggaaaagaca tgaccctatt ttgccagatg gtatcaacag ctccatttac 4680 cgtgcccatg gctgctttgg aggataaggg aaaactcttc acgtcaaagt ttgttttggc 4740 ctctaccaac gctgggcagg tgactcctcc tactgtggct gactataaag cgctacagag 4800 aagattcttc tttgactgcg acatagaggt gcagaaggat tacaagagga acggcgtcac 4860 tctagacgtc gcgaaagcca ctgaaacatg tgaagattgc tccccagcca atttcaaaaa 4920 gtgcatgccc ctgatttgtg gtaaggccct ccagctcaag tcccgcaagg gagatgggat 4980 gaggtatagt ttagacaccc tgataagtga gctccggcgt gagagcaatc gccgctataa 5040 cattggcaat gtccttgaag ccctgttcca gggtcctgtt agctataagc ccctgaggat 5100 tgaagttatt gaagaagagc ccgccccttc agccattagt gacctactgc aagcagtgga 5160 caatgaggaa gtgagggagt actgtaggtc aaagggatgg atcattgagg agaaagttac 5220 tgaactcaag ctagagcgta acgtgaaccg tgctctcgct gtcattcaga gtgtttccct 5280 catagccgcc gtcgctggga ccatttacat agtgtaccgc ctcttctcag gcatgcaggg 5340 cccatactct ggcattggaa ccaattacgc cacaaagaaa ccagttgtta ggcaggtaca 5400 aacccaggga ccattatttg atttcggagt ctccctgcta aagaagaaca tcagaacagt 5460 caagactggt gctggtgagt tcactgccct tggtgtgtat gacacagtca ttgtcttacc 5520 gcgccatgcc atgccaggca agaccataga gatgaatggc aaagacgtcg aggttttgga 5580 cgcctatgac ttgaatgaca agaccgacac ctccttggag ctgaccattg tcaaactcaa 5640 aatgaatgag aagtttagag acatcagggc aatgatccca gatcaaatca ctgactacaa 5700 tgaggcaatt gtggtagtca atacatccta ttacccacag ctttttatgc ccgttgggcg 5760 tgttaaggac tatggatttc ttaacctagc tggcagacct acacacagag ttttgatgta 5820 cgagttccca accaaagccg ggcagtgtgg aggagtggtt gttagcatgg gaaagatcgt 5880 tggtatccac gttggaggca acggcgccca aggatttgcg gcctctcttt tgcgcaggta 5940 ttttactgcg gagcaagggc agattgagta catcgagaaa agcaaggacg caggttaccc 6000 agtcatcaac gcacccaccc aaaccaagct ggaacccagt gttttctttg atgtcttccc 6060 cggggtgaag gaaccagctg ttctccacaa gaaagataag agacttgaga ccaacttcga 6120 ggaagcccta ttttcaaagt acatcgggaa tgtacagaga gacatgccag aagagttgct 6180 tattgcaatt gaccattatt ctgagcagtt gaagatgctc aacattgatc ctcggcccat 6240 ctcgatggaa gatgcgattt acggcacaga aggactggag gcgttagatc taggcactag 6300 tgcaggttac ccctacgtgg cgatgggcat taagaaaagg gacattctaa ataaggagac 6360 cagagacgtc acccaaatgc aggagtgcat aaataagtat ggattaaatt tgcccatggt 6420 tacgtatgtc aaagatgaac tcagagcccc cgataagatc aagaaaggaa aaagccgtct 6480 tattgaggca tctagtctga atgattcagt ggcaatgaga tgttacttcg ggaatctcta 6540 caaagcgttt cacaccaacc ctggtaccat ttctggttgc gcagttgggt gcgacccgga 6600 gacgttttgg agcaagattc ctgtgatgat ggacggagag ctatttgggt ttgattatac 6660 tgcttatgat gccagtttga gtccaatgtg gttccacgcc ctagctgagg tgcttaggag 6720 aattggcttt gttgagtgca aacattttat agatcaactc tgctgcagtc atcaccttta 6780 tatggacaag cattactatg ttgttggcgg catgccctct ggctgttcgg gtacctccat 6840 ttttaactcc atgataaaca atttgatcat ccgtacgctg gttctcacag tgtacaaaca 6900 tatcgatctt gatgatctaa agataatagc ttacggcgat gatgttctcg catcgtaccc 6960 gtatgagatt gacgctagcc ttctagcgga agctggcaaa agctttggtc taataatgac 7020 accgcctgac aagtccgcgg agtttgtcaa gttaacctgg gacaatgtga cctttctgaa 7080 gagaaggttc gtgcgcgacg cacgctaccc tttccttgtt catccggtca tggatatgtc 7140 aaacattcat gagtccattc gttggacgaa agaccccagg cacactgagg accacgtgcg 7200 ctcgctatgc ctattggcct ggcattgcgg cgaaagagaa tacaacgaat ttatcaccaa 7260 gattcgctcc gttcctgtcg ggagagccct tcatttacct tcattcaagg cgctcgaaag 7320 gaagtggtac gattctttct aaattgccaa cttgatgatc cggtttaatt agcttcaatt 7380 tggcctgaat acacccaccg gatggggtgt 7410 //