ID AF041837; SV 1; circular; genomic DNA; STD; PRO; 7768 BP. XX AC AF041837; XX DT 02-JUL-1998 (Rel. 56, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Buchnera aphidicola plasmid pLeu-Dn, complete plasmid sequence. XX KW . XX OS Buchnera aphidicola OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Buchnera. OG Plasmid pLeu-Dn XX RN [1] RP 1-7768 RX DOI; 10.1007/PL00006447. RX PUBMED; 9873079. RA Baumann L., Baumann P., Moran N.A., Sandstrom J., Thao M.L.; RT "Genetic characterization of plasmids containing genes encoding enzymes of RT leucine biosynthesis in endosymbionts (Buchnera) of aphids"; RL J. Mol. Evol. 48(1):77-85(1999). XX RN [2] RP 1-7768 RA Baumann L., Baumann P., Moran M.A., Sandstrom J., Thao M.L.; RT ; RL Submitted (07-JAN-1998) to the INSDC. RL Microbiology, University of California, One Shields Ave., Davis, CA RL 95616-8665, USA XX FH Key Location/Qualifiers FH FT source 1..7768 FT /organism="Buchnera aphidicola" FT /plasmid="pLeu-Dn" FT /host="Diuraphis noxia" FT /mol_type="genomic DNA" FT /note="endosymbiont" FT /db_xref="taxon:9" FT repeat_region 16..34 FT /rpt_type=INVERTED FT repeat_region 45..64 FT /rpt_type=INVERTED FT CDS complement(349..1191) FT /codon_start=1 FT /transl_table=11 FT /gene="repA1" FT /product="putative replication-associated protein" FT /db_xref="GOA:O85067" FT /db_xref="InterPro:IPR003446" FT /db_xref="UniProtKB/TrEMBL:O85067" FT /protein_id="AAD12597.1" FT /translation="MKSRKCYIHNPNPIFTPPKNNKRRPSFICYAMKKAKEIDVARCEL FT NYFLQPKNIKTGLHLKRFRQLNKHRASAMRAMVLAMLYHFNISSELVQASVEQLSDECG FT LSTISQSGNKSITRASRLITNFMEPMGFVNCEEIWDKILGNYMPKMIILTPLFFMLLDI FT SEKKLMNAKQQQLGWINKNLISKGLKPITMLDAKRRSKDIRMKSIFKYRMSRHAFYKKK FT KNAQRLIALDEKEARQTILRALVTKYTLSELTKLGPSGLKKQVNISYHYLRKIATNMY" FT CDS 1488..1991 FT /codon_start=1 FT /transl_table=11 FT /product="putative membrane-associated protein" FT /note="ORF1" FT /db_xref="GOA:O85068" FT /db_xref="InterPro:IPR005134" FT /db_xref="InterPro:IPR020761" FT /db_xref="InterPro:IPR020765" FT /db_xref="UniProtKB/Swiss-Prot:O85068" FT /protein_id="AAD12598.1" FT /translation="MERIIEKAIYASRWLMFPVYVGLSFGFILLTLKFFQQIVFIIPDI FT LAMSESGLVLVVLSLIDIALVGGLLVMVMFLGYENFISKMDIQDNEKRLGWMGTMDVNS FT IKNKVASSIVAISSVHLLRLFMEAEKILDDKIMLCVIIHLTFVLSAFGMAYIDKMSKKK FT HVLH" FT CDS 2158..2913 FT /codon_start=1 FT /transl_table=11 FT /gene="repA2" FT /product="putative replication-associated protein" FT /db_xref="GOA:O85069" FT /db_xref="InterPro:IPR003446" FT /db_xref="UniProtKB/TrEMBL:O85069" FT /protein_id="AAD12599.1" FT /translation="MPRKNYIYNPKPVFNPPKNKRKISTFICYAMKKASEIDVARSNLN FT YTLLLIDPKTGNILPRFRRLNEHRACAMRAIVLAMLYYFDIHSNLVEASIEKLADECGL FT STFSDSGNKSITRVSRLINDFLEPMGFVRCKKIKRKFVSNYIPKKIFLTPMFFMLFNIS FT QSKINRYLFKSKKMSQNLKITEKKIFISFSDIKVMSRLDEKSIRKKILNALINYYTASE FT LTKIGPKGLKKRIDIEYNNLCKLFKKIKK" FT repeat_region 2902..2952 FT /rpt_type=INVERTED FT repeat_region 2957..3007 FT /rpt_type=INVERTED FT CDS 3041..4591 FT /codon_start=1 FT /transl_table=11 FT /gene="leuA" FT /product="2-isopropylmalate synthase" FT /db_xref="GOA:O85070" FT /db_xref="InterPro:IPR000891" FT /db_xref="InterPro:IPR002034" FT /db_xref="InterPro:IPR005671" FT /db_xref="InterPro:IPR013709" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:O85070" FT /protein_id="AAD12600.1" FT /translation="MSSKVIIFDTTLRDGEQALQASLSVKEKLQIALSLEKCGIDIIEV FT GFPISSPGDFKSVQTISKKIKNSRICSLARCVEKDIEVAGDAMSSSDFFRIHIFLATST FT LHMESKLRKNFDEIIDMAVSSVKKALRYTDDVEFSCEDASRTTMDNLCRIVEKLIKAGV FT KTINIPDTVGYTIPNELSNIIKNLFERVPNIHKSIISVHCHNDLGMAVGNSISAIQAGA FT RQIEGTINGIGERAGNTALEEIIMAIKVREDILGVSTNIVHKEIYRTSQIISQICNMPI FT PANKAIVGSNAFAHSSGIHQDGVLKNRKNYEIMEPNTIGVKEVKLNLTSRSGRAAVKYY FT MDKMGYKDDDYDIDELYSAFLKLADKKGQVFDYDLEALAIFSKKQENAEYFYLKFFSVQ FT SISNGLSTASVKLKCGKKVYTESSTTSNGPVDATYQALNKIINFPITLQKFQLVAKGKG FT KDALGQVDILVKYENRQFHGIGLATDIIESSAQAMINVLNNIWKSQQVNKKLKNLKKY" FT CDS 4624..5715 FT /codon_start=1 FT /transl_table=11 FT /gene="leuB" FT /product="3-isopropylmalate dehydrogenase" FT /db_xref="GOA:O85071" FT /db_xref="InterPro:IPR001804" FT /db_xref="InterPro:IPR004429" FT /db_xref="InterPro:IPR019818" FT /db_xref="InterPro:IPR024084" FT /db_xref="UniProtKB/Swiss-Prot:O85071" FT /protein_id="AAD12601.1" FT /translation="MHKQYHIAVLPGDGIGPEVMQEAYKILQVLREHFSLFIKTKEFDI FT GGIAIDNHGIALPKKTLIGCENSDAILLGSIGGKKWDTLPINERPERASLLPLRKHFNF FT FCNLRPSNLYKELNFLSPLRNDIVKHGFDILCVRELTGGIYFGKPRGRVTKKKLMYAFD FT TEIYYKFEIVRIAHLAFKLARSRKHKLCSIDKANVLESSILWREVVEEVSKEYPDVILS FT HLYIDNVCMQIIKDPNQFDVLLCSNLFGDIISDECAMITGSIGMLPSASLNEKNFGLYE FT PAGGSAPDIQGKNIANPIAQILSLSMLIRYSMNLNKIANKIDNAVINVLKKGYKTMDIS FT KDQNYLKTNEMGDVIADFLKRDK" FT CDS 5718..7118 FT /codon_start=1 FT /transl_table=11 FT /gene="leuC" FT /product="3-isopropylmalate isomerase subunit" FT /db_xref="GOA:O85072" FT /db_xref="InterPro:IPR001030" FT /db_xref="InterPro:IPR004430" FT /db_xref="InterPro:IPR015931" FT /db_xref="InterPro:IPR015932" FT /db_xref="InterPro:IPR015936" FT /db_xref="InterPro:IPR015937" FT /db_xref="InterPro:IPR018136" FT /db_xref="UniProtKB/Swiss-Prot:O85072" FT /protein_id="AAD12602.1" FT /translation="MNKTLYEKIYDSHVVHSEKNGLSILYVDLHLLHEVTSPQAFESLR FT IKDRTVRQPKKTFATMDHNVSTESKDINASGSMAKIQMQQLIKNCKEFHISLYDLNHPN FT QGIVHVISPEQGMTLPGMVIVCGDSHTSTHGAFGALSFGIGTSEVEHVLATQTLKQQRF FT KNMKIEVIGKIGNFITAKDVILYIIGKIGSSAGTGYIIEFCGNVIKKMSMEERMTVCNM FT AIELGAKSGLIAPDETTYLYLKNKTYSPHGRNWQKAIEYWKTLKTDHNAIFDKVFTIDI FT SNILPQVTWGTNPDQVIGINEKIPDFTSFQNIVKKDLAKSACKYMDLKPGTYLTDITID FT KVFIGSCTNSRIEDLRSASKILKHNKISKNVKAIVVPGSGLVKRQAESEGLDKIFIEAG FT FEWRLPGCSMCLGMNNDRLSENERCASTSNRNFEGRQGRNGRTHLVSPIMAALAALYGK FT FSNPNKLN" FT CDS 7142..7768 FT /codon_start=1 FT /transl_table=11 FT /gene="leuD" FT /product="3-isopropylmalate synthase" FT /db_xref="GOA:O85073" FT /db_xref="InterPro:IPR000573" FT /db_xref="InterPro:IPR004431" FT /db_xref="InterPro:IPR015928" FT /db_xref="InterPro:IPR015936" FT /db_xref="InterPro:IPR015937" FT /db_xref="UniProtKB/Swiss-Prot:O85073" FT /protein_id="AAD12603.1" FT /translation="MLKFIEHTGVVAPLDISNVDTDAIIPKQFLKGINKKGFGKFLFHD FT WRYLDSNQLKINNKFILNKKIYENASILLTKKNFGCGSSREHAVWSLLDYGFKVIVASS FT FSDIFYNNSFNNKLLLITLDEKKIDSIFDIVKKNLGINISINLLTNKVIINQKTFFFKL FT DEFRRVCFLNDIDHIDLTMNSLKKINVYENNIPFFLLNRKEFKSH" XX SQ Sequence 7768 BP; 2912 A; 849 C; 1162 G; 2845 T; 0 other; tttttttgtt ttaaaaaaaa atagcgaaag ccttaatttt catcaaggct ttcgctattt 60 tttattatat gtttatttat ctttttatat aagattaaaa cactgttatt ttgcatttat 120 attatagaaa gcatatatca aaaaaaacaa catgcattta aaagtttaat tcaaaaaaaa 180 actttaaaaa aaaatttttt tttaaagttt tttttttgaa ttaaactaaa taatataatt 240 aatgataaat tttttaaaaa aaaattgaaa taagtaaatt ttagaaaaag aaaatcgtac 300 gcaaaaaaaa acgtattatt ttagaaaaac attttatgtt taattttttc aatacatgtt 360 cgtagctatt tttcgtaaat aatgataact aatatttact tgtttcttta gaccactagg 420 acctagttta gttaactcac tcagagtgta cttagttact aatgcacgaa gaatagtttg 480 cctggcttct ttttcatcta atgctattag acgttgtgca tttttctttt ttttataaaa 540 agcatgtctt gacattctgt atttaaaaat acttttcatt cgaatatctt tagatcgtct 600 tttagcatct agcatagtta taggttttag acctttacta ataagatttt tatttatcca 660 tcccaattgt tgttgtttag cattcattaa ttttttttca gaaatatcta atagcataaa 720 aaataatgga gttaatataa tcattttagg catataatta cctaatattt tatcccatat 780 ttcttcacag ttaacaaaac ccataggttc cataaaattt gtgattaatc gtgatgcacg 840 agtaatagat ttatttccag attgagatat tgttgataga ccacattcat cagataattg 900 ttcaactgaa gcttgaacta attcagaaga aatattaaaa tgataaagca ttgctaaaac 960 catagctctc atggctgatg ctctgtgttt atttaattgt ctaaatcttt ttaagtgcaa 1020 tcctgtctta atgttttttg gttgtaaaaa ataatttaat tcacatcttg ctacgtctat 1080 ttcttttgct tttttcatgg catagcaaat aaaagatggt cgacgtttat tatttttagg 1140 aggtgtaaaa attggattgg gattatgtat gtaacatttt cttgatttca tagatgatac 1200 ttaaaattta aatgataaaa aattgatttt ttattcataa caaaatctat atgaagtatt 1260 cattgtacta aaaattttta tatataaaat atatacttta cttttatttt gttttatgaa 1320 taaatataat ttgtaagata aaaacattct tatcataaat tttaattatt ttcaatataa 1380 cttattaaat tttttaacat attttatgtt atataaaaaa aattaatgca ttttatttag 1440 gattttttaa aaaagtttaa taaaaaatta atttaggaat tataaaaatg gaaagaatta 1500 ttgaaaaagc tatatatgca tctcgttggt tgatgtttcc tgtttatgtt ggtttatcat 1560 ttggttttat attattaaca ttgaaatttt ttcaacaaat tgtatttatt atcccagata 1620 ttttagctat gtcagaatcc ggtttggtat tagttgtatt atcattaatt gatattgctt 1680 tagtaggtgg ccttttagta atggttatgt ttcttggata tgagaatttt atttctaaaa 1740 tggatattca agataatgaa aaaagattag gttggatggg tactatggat gtaaactcaa 1800 taaaaaataa agtagcttca tcaatagttg caatatcttc tgtacatctt ttacgtcttt 1860 ttatggaagc tgaaaaaata ttagatgata aaattatgtt atgtgttata atccatctta 1920 cttttgtatt atctgcattt ggtatggcat acattgataa aatgagtaaa aaaaaacatg 1980 ttcttcacta atacaaagag aaaaataatt taattagatt ggttaaaaca atttgtaatg 2040 taatcacatt aatgttatat tcattttaaa aatcaaaatt catttttcga taaaggaatt 2100 agtttttcta aaaatgtttt tatatacaaa tatattttac ttaatcaagt gtatttagtg 2160 cctagaaaaa attatatata taaccctaaa ccagttttta atccacctaa aaataagaga 2220 aaaatatcta catttatttg ttatgctatg aaaaaagcat ccgaaataga tgttgctaga 2280 agcaatttaa attataccct attacttata gatcctaaga ctggtaatat tttacctcga 2340 tttagaagat taaatgaaca tcgtgcgtgt gctatgagag ctatagttct ggctatgtta 2400 tattattttg atattcattc gaatttagtt gaagcttcta ttgaaaagtt agcagatgaa 2460 tgtggtcttt ctacgttttc agattctggt aataaatcta tcacccgtgt ttcacgttta 2520 ataaatgatt ttttagaacc aatgggtttt gttagatgta aaaaaatcaa aagaaaattc 2580 gttagcaatt atatacctaa aaaaatattt ttgacaccaa tgttttttat gttgtttaac 2640 atatcacaat caaagataaa tcgttattta tttaagtcaa agaagatgtc tcaaaattta 2700 aaaattacag aaaaaaaaat atttatttct ttttcagata ttaaggtcat gtcacgatta 2760 gatgaaaaat ctattagaaa aaaaatttta aatgctttaa ttaattatta tacagcaagt 2820 gaattaacga aaataggccc taagggccta aagaaacgaa tagatattga atataataat 2880 ttatgtaaat tgtttaaaaa aattaaaaaa taaatttata caataaaaat ttcataagac 2940 atgggggtac aaaacgttgt acccccatgt cttatgaaat ttttattgta taaatttatt 3000 ttttaataaa acatctataa tttatagtga gaaaattttt atgagttcta aagttattat 3060 ttttgatacc accttacgtg atggtgaaca agcattacaa gcaagtttaa gcgttaaaga 3120 aaaattacaa atagcattgt ccctagaaaa atgtggcata gatattattg aagtaggatt 3180 tcctatttca tcacctggag attttaaatc agttcagacc atatcaaaaa aaattaaaaa 3240 tagtagaata tgtagtttag caagatgtgt tgaaaaagat atagaggtag caggtgatgc 3300 aatgtcttca tctgattttt ttcgaattca cattttttta gctacttcaa cacttcatat 3360 ggaatctaaa ttaagaaaga attttgatga aattatagat atggctgttt catcagtaaa 3420 aaaagcatta cgttatactg atgatgttga attttcttgt gaagatgcaa gtagaaccac 3480 aatggataat ttatgtcgaa ttgtagagaa attgataaaa gctggtgtga aaactattaa 3540 tatccctgat acagtaggtt atactatacc taatgaatta tctaatatta taaaaaattt 3600 atttgaacga gtaccaaata ttcataaatc tataatttct gttcattgtc ataatgattt 3660 aggaatggca gtaggtaatt cgatatctgc tatacaagca ggtgctagac agattgaagg 3720 tactattaat gggattggag aaagagctgg aaatacagca ttagaagaaa ttattatggc 3780 tataaaagtt agagaagata ttttgggtgt ttcaacaaac atagtacata aagaaattta 3840 tcgtactagt caaattatca gtcaaatttg taatatgcct atacctgcta ataaagcaat 3900 tgtaggtagt aatgcatttg cacattcttc tggtattcat caagatggtg tattaaaaaa 3960 tagaaaaaat tatgaaatta tggaacctaa tactattggt gtaaaagaag taaaacttaa 4020 tttaacttca cgatcaggaa gagctgcagt aaaatactat atggataaaa tgggttataa 4080 agatgatgat tatgatatag atgaacttta ctctgcattt ttaaaattag cagataaaaa 4140 aggacaagtg tttgattatg atttagaggc tttagcaatt tttagtaaaa aacaagaaaa 4200 tgcagaatat ttttatttaa aattttttag tgtgcaatct atttctaatg gcttatctac 4260 tgcttcagtg aaattaaaat gtggtaaaaa agtttataca gaatcttcta ctactagtaa 4320 tggaccggta gatgctactt atcaggcatt aaataaaatt ataaattttc caataacatt 4380 acaaaaattt caacttgtag caaaaggaaa gggtaaagat gcattaggtc aagtagatat 4440 tttagtgaaa tatgaaaatc gtcaatttca tggaataggt ttagctacgg atattattga 4500 atcgtcagct caagctatga ttaatgtttt aaataatata tggaaatctc aacaagtgaa 4560 taaaaagcta aaaaatttaa agaaatatta aaattataat atttattatt gaggtaattt 4620 tttatgcata aacaatatca tattgctgta ttacctggag atggaatagg tcctgaagtt 4680 atgcaagaag catataaaat tttacaggtt ttaagagaac atttttcatt atttataaaa 4740 acaaaagaat tcgatattgg agggatagct attgataatc atggtatagc attacctaaa 4800 aaaacactaa taggatgtga aaattctgat gcgattttat taggatctat cggagggaaa 4860 aaatgggata cattgcctat aaatgaacgt cctgaaagag cttcactatt acccctaaga 4920 aaacatttca attttttttg taatttaaga ccatctaatt tatataagga attaaatttt 4980 ttatcaccct tacgtaatga tattgtaaaa catggttttg atatattatg tgttagagaa 5040 ttaactggag gaatttattt tggaaaacca agagggcgcg taactaaaaa aaagctaatg 5100 tatgcttttg atacagaaat ttattataaa tttgaaattg ttcgtattgc tcatttagct 5160 tttaaattag cgcgctctag aaagcataag ttatgttcta tagataaagc taatgttctc 5220 gaaagttcta ttttatggag agaagtggtt gaagaggttt ctaaggaata tcctgatgtt 5280 attttatctc atttatatat tgacaatgtt tgtatgcaaa ttattaaaga tccaaatcaa 5340 tttgatgtac ttttgtgttc taatcttttt ggggatatca tttcagatga atgtgccatg 5400 attacaggtt ctataggaat gttaccttct gctagtttaa atgaaaaaaa ctttggttta 5460 tatgaaccag cagggggttc agctcctgat attcagggaa aaaatattgc taatcctata 5520 gctcagattc tttcgctttc tatgttaatt agatacagta tgaatttaaa taaaatagca 5580 aataaaattg ataacgctgt tattaatgtt ttaaaaaaag gttataaaac tatggatata 5640 tctaaagatc aaaattattt aaaaacaaat gagatgggtg atgttattgc tgatttttta 5700 aaaagagata aataaaaatg aataaaacat tatatgaaaa aatatatgat tcacatgttg 5760 tacattctga aaaaaatggt ttatctattt tatatgtaga tttacattta ttgcatgaag 5820 ttacatctcc tcaagctttt gaatcactgc gcattaagga tcgtacagtt agacaaccta 5880 aaaaaacatt tgctacaatg gatcataatg tttcaacaga aagtaaagat attaatgcat 5940 caggttcaat ggcaaaaata caaatgcaac aattaataaa aaattgtaaa gagtttcata 6000 tatcattata tgatttaaat caccctaatc aaggtatagt tcatgtaatc agtcctgaac 6060 agggtatgac tttacctggc atggttattg tgtgtggtga ttcccatact tctactcatg 6120 gagcatttgg ggcattatct tttggtattg gcacatcaga agtagaacat gttcttgcta 6180 cacaaacatt aaagcaacag cgttttaaaa atatgaaaat agaagttata gggaaaatag 6240 gaaattttat tacagctaag gatgttatct tatatattat agggaagata ggatcatctg 6300 ctggaactgg atatataatt gagttttgtg gaaacgttat taaaaagatg agtatggaag 6360 aacgaatgac agtttgtaat atggcaattg aactcggtgc aaaatctgga ttaatagcac 6420 cagacgaaac tacttattta tatttaaaaa ataaaactta ttctcctcat ggtcgaaatt 6480 ggcaaaaagc aatagagtac tggaaaactc ttaaaacaga tcataatgca atttttgata 6540 aagtatttac tattgatata tcaaatattt tacctcaagt tacttgggga acaaatcctg 6600 atcaagttat tggaattaat gaaaagatac ctgattttac ttctttccag aatattgtga 6660 agaaagattt agctaaatct gcatgtaaat atatggattt aaaaccaggt acttatttaa 6720 cagatattac gattgataaa gtttttattg gatcttgcac aaattctcga atagaagatt 6780 taagatctgc ttcaaagata ttaaaacata ataagatttc aaaaaatgtt aaagctattg 6840 ttgtaccagg ttcaggttta gtaaaaagac aagctgaaag tgaaggttta gataaaattt 6900 ttattgaagc tggttttgaa tggcgtttac ctggttgttc tatgtgctta ggtatgaata 6960 atgataggtt atcagaaaat gaacgttgtg cttctactag taatagaaat tttgaaggtc 7020 gtcagggtag aaatggtcgc acacatttag ttagtcctat tatggcagca ttagctgctt 7080 tatacgggaa attttctaat cctaataaat taaattagat aacatgagaa tgattaagaa 7140 aatgcttaaa tttattgaac atactggtgt agttgctccc ttggatattt ctaatgtaga 7200 tacagatgct ataataccta aacaattttt aaagggtata aataaaaagg ggtttggtaa 7260 atttttattt catgattggc gttatcttga ttctaaccaa ttgaaaataa ataataaatt 7320 tattttaaat aaaaaaattt atgaaaatgc tagcatttta ttaactaaaa aaaattttgg 7380 ttgtggttca tcaagagagc atgcagtttg gtctttatta gattatggtt ttaaggtaat 7440 agtggcatct agttttagtg atatttttta taataatagt tttaataata aattgctttt 7500 aattacatta gacgaaaaaa aaattgatag tatttttgat attgtaaaaa aaaatttagg 7560 tataaacata tctataaatt tactaactaa taaagttatt atcaatcaaa aaactttttt 7620 tttcaaatta gatgaatttc gtcgtgtatg tttcctaaat gatattgatc atatcgattt 7680 aactatgaat tctttaaaaa aaataaatgt atatgaaaat aatatcccat tttttctttt 7740 gaatagaaaa gaatttaaat ctcattaa 7768 //