ID AE001583; SV 1; linear; genomic DNA; STD; PRO; 5228 BP. XX AC AE001583; XX PR Project:PRJNA3; XX DT 17-NOV-1999 (Rel. 61, Created) DT 10-NOV-2011 (Rel. 110, Last updated, Version 10) XX DE Borrelia burgdorferi B31 plasmid lp5, complete sequence. XX KW . XX OS Borrelia burgdorferi B31 OC Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia; OC Borrelia burgdorferi group. OG Plasmid lp5 XX RN [1] RP 1-5228 RX DOI; 10.1046/j.1365-2958.2000.01698.x. RX PUBMED; 10672174. RA Fraser C.M., Casjens S., Huang W.M., Sutton G.G., Lathigra R., White O., RA Dodson R., Hickey E.K., Gwinn M., Peterson J., van-Vugt R., Palmer N., RA Haft D., Rosa P., Stevenson B.; RT "A bacterial genome in flux: the twelve linear and nine circular RT extrachromosomal DNAs in an infectious isolate of the Lyme disease RT spirochete Borrelia burgdorferi"; RL Mol. Microbiol. 35(3):490-516(2000). XX RN [2] RP 1-5228 RA Fraser C.M., Casjens S., Huang W.M., Sutton G.G., Lathigra R., White O., RA Dodson R., Hickey E.K., Gwinn M., Peterson J., van-Vugt R., Palmer N., RA Haft D., Rosa P., Stevenson B.; RT ; RL Submitted (11-NOV-1999) to the INSDC. RL The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD RL 20850, USA XX RN [3] RC Protein update by submitter RP 1-5228 RA Mongodin E.F., Fraser-Liggett C.M., Qiu W.-G., Dunn J.J., Luft B.J., RA Schutzer S.E., Casjens S.R.; RT ; RL Submitted (09-NOV-2011) to the INSDC. RL Institute for Genome Sciences, 801 West Baltimore Street, Office #622, RL Baltimore, MD 201201, USA XX DR GR; AE001583_GR. DR StrainInfo; 267491; 1. XX FH Key Location/Qualifiers FH FT source 1..5228 FT /organism="Borrelia burgdorferi B31" FT /plasmid="lp5" FT /strain="B31" FT /mol_type="genomic DNA" FT /db_xref="taxon:224326" FT gene 264..638 FT /locus_tag="BB_T01" FT CDS 264..638 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BB_T01" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003459" FT /db_xref="UniProtKB/TrEMBL:Q9S020" FT /protein_id="AAF08550.2" FT /translation="MYKAIKEQQEIEIDHACRILILTATIFEINSIFENYYQKTLLKKY FT NENLKNKNLPPSNISTMKKYLNQLEKEIKIIAKFYFKNDQSLIYCKLNYTLEKICLKLI FT KFYKKFYKELKQFTQKNITT" FT gene 744..1097 FT /locus_tag="BB_T02" FT CDS 744..1097 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BB_T02" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q9S019" FT /protein_id="AAF08546.1" FT /translation="MEKSLKEILGMNSKNKLSSHLIILIYTLNNINLNLNIEYYNRGFI FT RRAFTFNVDRYCNTSKDIEIDIDLLIKYLDILENNLKIIANKYKVEKNIFKLYYIINYP FT LKICYTKIRNYYK" FT gene 1208..1576 FT /locus_tag="BB_T03" FT CDS 1208..1576 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BB_T03" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q9S018" FT /protein_id="AAF08551.1" FT /translation="MNGIINDTLVARITKQIKFAKNKLIILVKTLDHMNQELFYSENKD FT YTHLLIKSKFNLALAKTTQHEVNYKTLLEYLEILEKNPKVIVKCPTNKENESFIGRYTL FT LYPLEVCCTKIYNLHPNI" FT gene 2148..3254 FT /locus_tag="BB_T0008" FT CDS 2148..3254 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BB_T0008" FT /product="Borrelia ORF-A superfamily protein" FT /note="identified by match to protein family HMM PF02414" FT /db_xref="UniProtKB/TrEMBL:G5IXI7" FT /protein_id="AET25427.1" FT /translation="MNSKTTNKTNRNCYNKVQHKLIVLISTICYLNKTHKKYTQKTILY FT YFNENLRKNGQTISTLRTMQKYIYRLQKEIKVTTNYYQHMGVNSGTEIYYKLNYPKKDC FT YHKINQHFKEKKEERYQNRVANYFNKNSDSKMGSVQLGECNNNNNNIKEERKINEIEKY FT QVIKYFNKCDFSCKEILPVLLTLNIDKENIIKIIKILKITEINSKNKNIRPTKSCIKKK FT QEKLKGILCNTQKELEENGYNPKQLEINFQKIYENYKYKPHFIIENHKYSDLNNIKRKL FT EKSIERKKENSQQDYENLKINVFNILIEQLKKETNIEILKPIIKEYLNNQKKIKYNKIF FT GIYYLELLEIIKNRKHDLNLEKFSKKVV" FT gene 3340..4332 FT /locus_tag="BB_T06" FT CDS 3340..4332 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BB_T06" FT /product="Sua5/YciO/YrdC/YwlC family protein, putative" FT /note="identified by match to protein family HMM PF01300; FT match to protein family HMM PF03481; match to protein FT family HMM TIGR00057" FT /db_xref="InterPro:IPR004388" FT /db_xref="InterPro:IPR005145" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR010923" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:Q9R3N4" FT /protein_id="AAF08548.1" FT /translation="MIKTPIISEDQFKIALKLIKMGEIIVFPTDTVYAIGANIYDEYAV FT RMINLVKKKSINEPLMLYVDTIEKIKELSSHVPKSAKILMEKFSPGPLTYVLKKSIKIP FT KFINNNLDTVAIRIPKNKTALNLIRKLKNPLVVSSANLSKRPSSTSFSMALKELNGLVG FT GIIMPKKNKDSNIGIESTIIEFDSKDNVIILRPGAITKKMIEKVLGSRYKVNYAKETKI FT DLKKMFSYRLRIPVHTFKRGDNIRKYLKTNTKVLITRDTFKFYFFSFLWDKKNIILFDS FT LIEYAENLYKELVNAEEKYDQVIVEIVENEELGYAINNRIVKASSNNFM" FT gene 4388..4819 FT /locus_tag="BB_T07" FT CDS 4388..4819 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BB_T07" FT /product="outer membrane protein" FT /db_xref="UniProtKB/TrEMBL:Q9S016" FT /protein_id="AAF08549.1" FT /translation="MENIFEYLKLNAVEICVLKDIKKVIYKFYESILDIENDAETINIL FT SPXKSQNILNEFFFNLGPKKSKELINLFRKIKVKLGDNVFENKVFIFYLCLDDVDFFKL FT LYVLDKSNFDDYLILIYEKFLAIRKDLKLILNNYGSNNL" XX SQ Sequence 5228 BP; 2308 A; 637 C; 608 G; 1674 T; 1 other; ggagtatttt gactcaaaac tttacccttt aaattactaa atttaacttg aaaatactaa 60 actttaaccc aaaataataa aactttaact tgaatttttc aaaattacaa aactttaacc 120 caaaatgata aaactttaat tttttgtaat ttttacataa aagtgttaac tttaaaatcc 180 caaactttat aattttggga aattatcaat acttttttaa tttattcttt attttcaaaa 240 taatctttat atacttatat attatgtata aggctataaa agaacaacaa gaaatagaaa 300 tagatcatgc atgcagaata cttattctta ccgcaacaat atttgaaata aattcaatat 360 tcgaaaatta ttatcaaaaa actctactca aaaagtataa cgaaaatctc aaaaacaaaa 420 atctacctcc tagtaatata tcaacaatga aaaaatactt aaatcaatta gaaaaagaaa 480 taaaaatcat agcaaaattc tattttaaaa acgatcaatc tctaatttat tgcaaactta 540 attataccct agaaaaaatt tgtttaaaac taataaaatt ctacaaaaaa ttctacaaag 600 aattaaaaca atttacacaa aagaacatta ctacttaatt gtaaatacat tataaaataa 660 tcttatgcaa atatttagaa atacaaattg taaagatata tatttttatt taaataaata 720 ataaaaattg ctggcacact aatttggaaa aatctttaaa agaaatacta ggtatgaata 780 gcaaaaataa gctatcttca cacttaataa ttcttattta cacactaaac aatattaatc 840 taaatttaaa tattgagtac tataataggg ggtttatacg ccgtgcgttt acttttaacg 900 tagatagata ttgcaatact agtaaagata ttgaaataga catagactta ctaataaagt 960 atctagatat tttagaaaac aatctaaaaa tcatagctaa taaatataaa gtagaaaaaa 1020 atatattcaa actttactac ataatcaatt atcctttaaa aatatgttac acaaaaatta 1080 ggaactacta taaatagact atataatggt ttaacgccaa aaaatactgc actatattta 1140 caatataatg gtttaacgcc aaaaaatact gcactatatt tacaatataa tagggggcta 1200 attcattatg aatggaataa ttaacgatac actggtcgca agaataacaa agcaaattaa 1260 atttgctaag aataagttaa tcattcttgt caaaacacta gatcacatga atcaagaatt 1320 gttctatagt gaaaacaaag attatactca tttattaata aaaagcaagt ttaatcttgc 1380 tctagctaaa acgactcaac acgaagttaa ttataaaacc ctattagaat atcttgaaat 1440 attagaaaaa aatccaaaag taatcgtaaa atgtcccaca aataaagaaa atgaaagctt 1500 tataggccgt tatacactcc tttacccttt agaagtttgt tgcactaaaa tttataatct 1560 tcatcctaat atttaagcta atataatcca gaaaatttac tataatcgat tatataaata 1620 gtaaaccaat atctatccta gtatattatg gcctataata ggcccaataa agaatatttt 1680 gatctataaa tgatcaatcc ataaaggact atatgtcttt tatggatttt gaacataaat 1740 aattacttaa ttaccaatat aaagctaaat acaaaataaa tccaatatat ctttaaattc 1800 tagaaaattt ttaatctaaa aaaatcatta ttatagtgcc caaaacaaaa taaaacttaa 1860 actgggaaaa ttagtgttac ataaaatgaa tagggcttaa gacaaattct ttataaaaaa 1920 cttgctttaa gccctatttc acgatcactt ctttgtaatt cgaactctcg tcgaactatt 1980 tatagtataa caaaaattaa accatagtca agttgtattt taaataaatt ttaatctcaa 2040 ttactaaaac tttacaatat aactaaaatt gctataagag tatttacttt tatagcaatt 2100 ttagttatat tgtaaaatga tcaccataat tgtaaggaga agtctctatg aattcaaaaa 2160 caacaaataa aaccaataga aattgctata ataaagttca acacaaatta atagttctta 2220 tttcaacaat atgctatcta aacaaaacac ataagaaata tacacaaaaa accatactct 2280 attactttaa tgaaaatcta agaaaaaacg gtcaaactat ttctacacta agaactatgc 2340 aaaagtatat ctatagacta caaaaagaaa taaaagtcac aacaaactac tatcaacata 2400 tgggggtaaa ttcgggtacg gaaatttatt acaagcttaa ttatcctaaa aaagattgtt 2460 atcataaaat aaaccagcac tttaaagaaa aaaaagaaga aagataccaa aatagagttg 2520 ccaactattt caacaaaaat tctgattcaa aaatgggtag tgtgcaattg ggggagtgta 2580 ataataataa taataatata aaagaagaaa gaaaaattaa cgaaatagaa aagtatcaag 2640 taataaaata cttcaacaag tgtgactttt catgtaaaga aattcttcca gttttattaa 2700 cattaaatat tgataaagaa aacataatta aaataataaa aatcctaaaa ataaccgaaa 2760 ttaactcaaa aaataaaaat atacgcccta ctaaatcttg tattaaaaaa aaacaagaaa 2820 aattaaaggg aattctatgt aacactcaaa aagaattaga agaaaacggg tacaatccca 2880 aacaattaga aataaatttt caaaaaatat acgaaaatta caaatataaa ccccatttta 2940 ttattgaaaa tcataaatat agcgatttaa acaacataaa acgtaaattg gaaaagtcaa 3000 ttgaaagaaa aaaagaaaat tctcaacaag attatgaaaa tttaaagata aacgttttca 3060 atatccttat tgaacaacta aaaaaagaaa caaatattga aattctaaag cctattataa 3120 aagaatattt gaataaccaa aaaaaaataa aatacaacaa aatatttggc atatattatc 3180 ttgaattact agaaataata aaaaatagaa aacatgatct aaatttagaa aaatttagta 3240 aaaaagttgt ttaggtgcta aaatatgaaa agtttattta gattagtgca gaaaattgag 3300 ttcaaaaata cgaattattc catagaggct aaagaataaa tgataaaaac accaataatt 3360 agtgaagatc aatttaaaat agctttaaaa ttaatcaaaa tgggtgaaat tattgtattt 3420 ccaacagata cggtttacgc tataggggcc aatatttatg atgaatatgc agtgagaatg 3480 ataaatttag taaaaaaaaa atccattaat gagcccttaa tgctttatgt tgatacaata 3540 gagaaaataa aagaattatc cagccatgtt cctaaaagtg ctaagatttt aatggaaaag 3600 tttagtccgg gccctttaac ttatgttctt aaaaaatcaa taaaaatacc taaattcatt 3660 aataataact tagatacagt ggcaataaga atacccaaaa ataaaaccgc attaaattta 3720 attagaaaat tgaaaaaccc tcttgtagta tcatcagcaa atttatccaa aaggcctagt 3780 tcaacaagtt ttagcatggc tttaaaagaa ttaaatgggc ttgtaggagg gataataatg 3840 ccaaaaaaaa ataaagactc taatattggc atagagtcaa ctattattga atttgactcg 3900 aaagataatg taataatatt aaggcccggt gcaataacaa aaaaaatgat agaaaaagtg 3960 ctaggcagta gatataaagt aaattatgca aaggaaacaa aaatagactt aaaaaaaatg 4020 ttttcttata ggctaagaat acctgtccat acatttaaac gcggggataa cataagaaaa 4080 tatttaaaaa cgaatacaaa agtacttatc acaagagaca cttttaaatt ttattttttt 4140 agttttttat gggataaaaa aaatattata ttattcgatt ctttaataga atatgcagaa 4200 aatctttata aagagctagt aaatgccgaa gaaaaatatg atcaagttat tgttgaaata 4260 gtagaaaatg aagaactagg gtatgctata aataatagaa ttgtaaaggc tagctcaaat 4320 aatttcatgt aaattcatta ataaattttt actattctaa taaattgtta tatgtttccc 4380 atatataatg gaaaacatat tcgagtactt aaaattaaat gccgtcgaaa tttgtgtttt 4440 aaaagatata aaaaaagtta tttataagtt ctatgagtcg attttagata tagaaaatga 4500 tgcggagaca ataaatatat tgtctccgcm taaaagtcaa aacattttaa atgaattttt 4560 ttttaatttg gggccaaaaa agtctaaaga attaatcaac ctttttcgta aaattaaagt 4620 aaagctgggt gataatgtgt ttgaaaataa ggttttcata ttctatttat gtcttgatga 4680 tgtagatttt tttaaacttt tgtatgtgct tgataaaagc aattttgatg attatctaat 4740 attgatttat gaaaaatttc ttgctataag aaaagatttg aaattaatat tgaacaatta 4800 tggttcgaat aacttgtaat ttaaagtaaa tgtattagcc cctttttggg gctaataaca 4860 tattctgtat ttgtaattta ggattgttgc aataatatta tctattattg taatatacaa 4920 gattcacgtt ttgtatgttg cagtaaaggg gcagtttttg tatagattct tgtgtagaaa 4980 aattttcatt aatttttggt tgctcttcta ctactctaga agagttttcc tcctttttat 5040 tgaatttatg actttatttt tgcacttatg atataaagaa ctgtcctttg tatatgattt 5100 agaatacaat atagcattat gccttttaat ttaaagagcg ttatttgttc ctaaaaaaga 5160 aaagaatttc aagtgcagct agtaaaatag gagccaataa tggctctaca gctttatact 5220 aaaaaaaa 5228 //