ID AB256957; SV 1; circular; genomic DNA; STD; PRO; 3828 BP. XX AC AB256957; XX DT 13-APR-2006 (Rel. 87, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 2) XX DE Campylobacter lari plasmid pUPTC237 DNA, complete sequence. XX KW . XX OS Campylobacter lari OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OG Plasmid pUPTC237 XX RN [1] RP 1-3828 RA Ito T., Sekizuka T., Murayama O., Moore J.E., Millar B.C., Watabe M., RA Matsuda M.; RT ; RL Submitted (11-APR-2006) to the INSDC. RL Motoo Matsuda, Azabu University, Laboratory of Molecular Biology, School of RL Environmental Health Sciences; 1-17-71, Fuchinobe, Kanagawa 229-8501, Japan RL (E-mail:matsuda@azabu-u.ac.jp, Tel:81-42-769-1942, Fax:81-42-754-7661) XX RN [2] RA Ito T., Sekizuka T., Murayama O., Moore J.E., Millar B.C., Watabe M., RA Matsuda M.; RT "Cloning, sequencing and molecular characterization of a cryptic plasmid RT from a urease-positive thermophilic Campylobacter (UPTC) isolate"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..3828 FT /organism="Campylobacter lari" FT /plasmid="pUPTC237" FT /strain="237" FT /mol_type="genomic DNA" FT /note="Urease-positive thermophilic Campylobacter" FT /db_xref="taxon:201" FT repeat_region 1017..1103 FT /rpt_type=TANDEM FT /rpt_unit_seq="tattaaaagtagaaatttaaac" FT /note="3x22 bp" FT CDS 1378..1458 FT /codon_start=1 FT /transl_table=11 FT /gene="repA" FT /product="putative replication protein A" FT /db_xref="UniProtKB/TrEMBL:Q1T718" FT /protein_id="BAE93258.1" FT /translation="MKQHSKRFVRLYINFKLFKLKVEVFF" FT CDS 1511..2536 FT /codon_start=1 FT /transl_table=11 FT /gene="repB" FT /product="putative repliccation protein B" FT /db_xref="GOA:Q1T717" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q1T717" FT /protein_id="BAE93259.1" FT /translation="MQMSDIVKYHNDFNKIKLPSFNEIEQDLLCGLMVKLKEQKGKVFF FT YPGELKKFLKSDYTNESLLKFSTSLKEKFFKADFTIIEKLTRGNKEVTAYRTINLFTEF FT AIYVTNDKKELESIEIQVNPRFEYILNQLTANFTSFELAEFIALSGKYTKTLYRLLKQY FT RTTGTAYFEWDEFKRIMDIPENYEMHNIDKWVLKPAIKELSKERTLFDQVRIPFKNLAF FT EKKKIKARGRGGKVVGIEFTFKPENIAIQKIENEAIENASDEDKILMTCKSLCQSKIRF FT KYEDKIYQSNSFDFYDFTFNTIELQEDEFGNLIPNDIKIWKCNDKEQFFKMIKLFASDI FT Y" FT CDS 2553..2843 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q1T716" FT /protein_id="BAE93260.1" FT /translation="MNAKDILAEIEGNETHEDHKQKQVFIYDESVEKEYQNFRKNQDSF FT FLKKSAMQQAEKLEIEISNLEKELQEITEKLNQKKSEFIQALKVINDINNE" FT CDS join(3204..3828,1..758) FT /codon_start=1 FT /transl_table=11 FT /gene="mob" FT /product="mobilization protein" FT /db_xref="UniProtKB/TrEMBL:Q1T715" FT /protein_id="BAE93261.1" FT /translation="MGQISSINFKKSNPIQIQHNLRILPPSYLIGGKFECNRNFKETIA FT LKEAMVSNAIEKYTELTGQKFQAKSYEWSAVVNIKETTSMKDLENLSEHFQKKYGFQCY FT QIAIHRDEGHINEQGEKVINHHAHMEFITLDRETGKNRQRELSREKLREMQTEVAKILG FT MERGVDKRISKRQRIEPRVYGYLKELEKREKKQELLNKKEYTQIIEAFRKEQIGKGLEK FT DFFRDLSNLKKNFQEVNQDQLSELLNDILSRHQKQEKEYQEKIEKQEQIIKSQALELEK FT IKQMFDLQGINYDSFINAQNYALNQKSVKNEQTINQNQENASKREKELLYEQNKLNLIN FT TNNMKNEDYYFLQDFYKIHSKDKELQEQPSLKVYQEPFKQMPDILSRNLWGDHPSILKD FT ETPLQTAKDYLKTLLNYLKNLAINKESKQEITTEKSKEYFRNKVLNFEKREEKKQGMGF FT SR" XX SQ Sequence 3828 BP; 1658 A; 521 C; 608 G; 1041 T; 0 other; aagcttttag aaaagaacaa atagggaaag gacttgaaaa agactttttc agagaccttt 60 ctaacttaaa aaagaacttc caagaagtca atcaagacca attgtcagaa ctattaaacg 120 atattttgtc tagacatcaa aaacaagaaa aagaatacca ggaaaaaata gaaaaacaag 180 agcaaatcat caaaagccaa gcattagaat tagaaaaaat caaacaaatg tttgatttgc 240 aaggaattaa ttacgatagt tttataaacg cacagaatta cgctttaaat caaaaaagtg 300 ttaaaaacga gcaaactatc aaccaaaatc aagaaaacgc gtcaaaacgc gaaaaagagc 360 ttttatacga gcaaaacaaa ttaaacctta tcaacacaaa caatatgaaa aatgaagatt 420 attacttttt acaagatttt tacaaaattc atagcaaaga caaagaattg caagagcaac 480 ctagtttaaa agtctatcaa gagcctttta aacaaatgcc cgatattctt agtcgtaatc 540 tttggggcga ccacccgagc attctaaaag atgaaacacc tttgcaaaca gcaaaggact 600 atttaaaaac acttttgaat tatttaaaaa atcttgctat caacaaagaa tcaaaacaag 660 aaataacaac agaaaaaagc aaagagtatt tcagaaacaa agttttaaat tttgaaaaaa 720 gggaggaaaa aaagcagggt atgggctttt caagatgaaa caccctttcc cttttctttt 780 ctaaacaaaa cgcacctata aggtgctatg ttttgtgtaa atggggtgcg gggttgtgaa 840 gttgcctaga gcaacgaacg aacaaaaacc ccgccctatt gtatagaaag aaaagttttt 900 aaaaaagcaa agcaactacc gagaaaaact cggcactttg tcttttttaa atttttatat 960 atttttatat atttttaggg ggctttcaaa cgcctatgtg atgggagcta gcgaaatatt 1020 aaaagtagaa atttaaacta ttaaaagtag aaatttaaac tattaaaagt agaaatttaa 1080 actattaaaa gtagaaattt aaaaaacacg ccggtaaaga ttttttttac cggcttaatt 1140 aaaacgggga attaggagta ttaaggcaac aaatttaaaa agcacatcaa aacaccatat 1200 aacgatagct agagaaatat taagtgggta aatttaaact attaaaaggg cagactgtag 1260 gtttatctac tcttaataag agtagtattt atttgtaaat ctacttaaaa ttatgctata 1320 ataaaaaatc cgccttgagt tttactcttg gcggaaattt atcaatcaag gctaactatg 1380 aaacaacata gtaagcgttt tgtgagatta tacatcaatt tcaaactttt taagcttaaa 1440 gttgaagtat ttttctaaac aaaaccgcag gggctaaaaa gcccctagcc ttgattgtct 1500 tactttggat atgcaaatga gcgatattgt taaatatcat aatgatttta ataaaattaa 1560 actacctagt tttaatgaaa tagaacagga cttgctttgc ggtttaatgg taaaacttaa 1620 agagcaaaaa ggtaaagtat ttttttatcc tggcgagtta aaaaagtttt taaaaagcga 1680 ttacaccaat gagagcttat taaaattttc aacttctcta aaagagaaat ttttcaaagc 1740 agattttaca ataatcgaaa aattgactag agggaataaa gaagtaacag catatagaac 1800 aataaatctt tttacagaat ttgcaattta tgttaccaac gataagaaag aattagaaag 1860 tatagaaata caagttaatc cacgctttga atatattcta aaccaactca cagctaattt 1920 tacatctttt gaattagcag aatttattgc acttagcggt aaatatacaa aaactcttta 1980 ccgcctttta aaacaatata gaacaacggg aacagcttat tttgagtggg acgagtttaa 2040 aagaattatg gatataccag aaaattacga aatgcacaac attgataaat gggttttaaa 2100 acctgctata aaagaactaa gtaaggaacg caccttgttt gatcaggtgc gtatcccttt 2160 taaaaatcta gcttttgaga aaaagaaaat caaagctagg gggcggggcg gaaaagttgt 2220 aggtattgaa tttactttca aacccgaaaa cattgcaata caaaaaattg aaaatgaagc 2280 gatagaaaat gcaagcgatg aagacaaaat cttaatgact tgtaagagcc tttgtcaatc 2340 aaaaattaga tttaaatacg aggataaaat ttatcaaagc aactcttttg atttttacga 2400 ttttactttt aacacaatag aattacaaga agatgaattt ggaaatttaa ttccaaacga 2460 tattaaaatt tggaaatgta acgacaaaga gcaatttttt aaaatgatta aattatttgc 2520 aagcgatatc tactaaaaag gaaaatcata aaatgaatgc aaaagatata ttagcagaaa 2580 ttgaaggaaa tgaaacacac gaagatcata aacaaaaaca agtttttatt tatgatgaaa 2640 gtgtagaaaa agaatatcaa aattttagaa aaaatcaaga tagctttttt ctaaaaaaat 2700 cagcaatgca acaagcagaa aaacttgaaa ttgaaataag caatcttgaa aaagaattgc 2760 aagaaatcac agaaaagctt aatcaaaaaa agagcgaatt tatacaagct ttaaaagtaa 2820 tcaatgatat aaacaacgaa taatatacta aacaaaaaaa gttaaaatgc ttttcccttt 2880 ttttgataac actgagctta gcgaagtagt tatctcaatt aacgcttttt gcgttaattg 2940 caaattagac accttttaaa aaagtgctaa tttgtttttt aaaaaatatt tagttataat 3000 ttcacaagtt caatcacaac tatatttttt aaaaaaaggg gaagtaatgg agctgaaaga 3060 aaaaagaaag attatagcta agtttaataa agcagtaaaa gacttgacta ttttaaaagc 3120 agaaaaaaaa cgcattgaag ctaaaataaa aaatgccgaa aaaatcatcg atgattttaa 3180 aataattata gacacacaag acaatgggac aaatatctag tattaatttt aaaaaatcta 3240 atccaataca aatacaacac aatttaagaa ttttaccgcc tagttatttg atcggcggta 3300 agtttgaatg caatcgtaat tttaaagaaa ccattgcttt aaaagaagca atggtaagca 3360 atgctattga aaaatataca gaacttacag gacaaaaatt tcaagcaaaa agctatgaat 3420 ggagtgcggt tgtaaatatc aaagaaacca catcgatgaa agatttagaa aatctttcag 3480 aacactttca aaaaaaatat ggctttcagt gttatcaaat cgcgatacat cgcgatgaag 3540 gacacatcaa cgagcaaggc gaaaaagtaa tcaatcatca cgcacatatg gagtttatta 3600 ctcttgatag agaaacgggg aaaaatagac aaagagaact aagcagagaa aagctaagag 3660 aaatgcaaac ggaagttgct aaaatactag gaatggagcg tggtgtagat aaaagaatat 3720 caaagcgaca acgcatagaa ccaagagttt atggctattt gaaagaactt gaaaaaaggg 3780 agaaaaagca agagctttta aacaaaaaag aatacacgca aataatcg 3828 //