ID AB211496; SV 1; circular; genomic DNA; STD; PRO; 3634 BP. XX AC AB211496; XX DT 22-APR-2005 (Rel. 83, Created) DT 01-OCT-2007 (Rel. 93, Last updated, Version 3) XX DE Campylobacter lari plasmid pCL300, complete sequence. XX KW . XX OS Campylobacter lari OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OG Plasmid pCL300 XX RN [1] RP 1-3634 RA Batori H., Sekizuka T., Murayama O., Moore J.E., Matsuda M.; RT ; RL Submitted (18-APR-2005) to the INSDC. RL Motoo Matsuda, Azabu University, Laboratory of Molecular Biology, Graduate RL School of Environmental Health Sciences; Fuchinobe 1-17-71, Sagamihara, RL Kanagawa 229-8501, Japan (E-mail:matsuda@azabu-u.ac.jp, Tel:81-42-769-1942, RL Fax:81-42-754-7661) XX RN [2] RA Batori H., Sekizuka T., Murayama O., Moore J.E., Matsuda M.; RT "First isolation and molecular characterization of a cryptic plasmid from RT urease-negative Campylobacter lari"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..3634 FT /organism="Campylobacter lari" FT /plasmid="pCL300" FT /strain="300" FT /mol_type="genomic DNA" FT /note="U.S.A" FT /db_xref="taxon:201" FT promoter 99..120 FT /note="sigma54 like promoter" FT terminator 1102..1131 FT repeat_region 1361..1470 FT /rpt_type=TANDEM FT /rpt_unit_seq="tattaagggggcaaatctaaac" FT /note="5x22 bp" FT repeat_region 1471..1485 FT /rpt_unit_seq="tattaagggggcaaa" FT promoter 1532..1565 FT /note="sigma70 like promoter" FT RBS 1566..1569 FT CDS 1576..1632 FT /codon_start=1 FT /transl_table=11 FT /gene="repA" FT /product="putative replication protein A" FT /db_xref="UniProtKB/TrEMBL:Q53U46" FT /protein_id="BAD95841.1" FT /translation="MKKHSKRLKVVLYLNFKL" FT RBS 1698..1701 FT CDS 1708..2742 FT /codon_start=1 FT /transl_table=11 FT /gene="repB" FT /product="putative repliccation protein B" FT /db_xref="GOA:Q53U45" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q53U45" FT /protein_id="BAD95842.1" FT /translation="MSDIVKYHNDFNKIKLPSFTEIEQDLLCGLMVKLKEEKNKVTFYP FT SDLRNILKSSYDNESLLKFASSLKEKFFKADFTIIERTTRGDKEVEAHRTINLFTEFAI FT YVYKGYVLEKSNELESIEIQVNPRFEYILNKLTANFTAFELAEFVALSGKYTKTLYRLL FT KQYRSTGKVYFEWEEFKRIMDIPQDYRQSEIDKRIIKPAIKELSKERNLFDQIRVPFKN FT LAYEKDKAKSRGRGGKVVGIEFTFKPENVEMQKIENKALNNASEEEKILNTCNNMCISQ FT MKFEYENKIYKTNSYNFDKLVFYAVELSEDDFGNQIPANHKSFKCENKEQFFKMIKTFS FT NNLR" FT RBS 2882..2885 FT CDS 2895..3149 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /note="Hypothetical protein Cjp32 like protein" FT /db_xref="UniProtKB/TrEMBL:Q53U44" FT /protein_id="BAD95843.1" FT /translation="MASLRFSDSLLRTKFAGRITEGIDRNTDEPRNETRSQRDEDKSRL FT SRAESRESRAESERSEANLSTSKIIYGKNGEKIRGINNL" FT terminator 3207..3234 FT promoter 3476..3503 FT /note="sigma28 like promoter" FT CDS join(3511..3634,1..1085) FT /codon_start=1 FT /transl_table=11 FT /gene="mob" FT /product="mobilization protein" FT /note="there is possibility of 129..1085 in CDS" FT /db_xref="UniProtKB/TrEMBL:Q53U43" FT /protein_id="BAD95844.1" FT /translation="MAQISSINFKKSNHIQTQHNDRDLPPNYLIGGEVECNHNHQEALA FT LKNQIIKDAIETYTENTKQKFQAKSYEWSAVVNIKADTTMNDLENLSKHFQEKYGFQCY FT QIAIHRDEGHINEQGEKVINHHAHMEFITLDRQTGKSMFRADLQKPRALRQIQSEVAEI FT LKMERGVDKRKSGAKRIEPRAYAVLKEKEKRKKKQEKLLNKSEYKQIIENFRKEQAGKG FT FTKEFFKDLSELKKNFQEVNETSLSELLNDILEKHREYIEEVKKENIAKIDNTNLNAQN FT EPLNQKEQKNDTNIDLIKENQFKSDLKPLNELEKENQILKNQIEVMKEVFEPVMRRWKN FT QAERIKKIDIILPNEKEKTTKEAYEAHIKLEKLSKIGVFTYDNAKIILDKINQFIKTFQ FT NKR" XX SQ Sequence 3634 BP; 1598 A; 445 C; 599 G; 992 T; 0 other; aagctttagc attaaaaaat caaataatta aagatgctat tgaaacttat acggaaaata 60 ctaagcaaaa atttcaagca aaaagctatg aatggagtgc ggttgtaaat ataaaagctg 120 atactacaat gaatgattta gaaaatcttt ctaagcattt tcaagaaaaa tacggctttc 180 aatgctatca aatagcaata caccgcgatg aaggacacat caacgagcaa ggcgaaaaag 240 taatcaatca tcacgcacat atggagttta ttactcttga tagacaaact ggtaaaagta 300 tgtttagagc cgatttgcaa aaaccaagag ctttaagaca aatacaaagc gaagtcgctg 360 agattttaaa aatggagcgt ggagtagata aaagaaaaag tggagcaaaa cgcatagagc 420 caagagctta tgcagtttta aaagaaaaag aaaaaaggaa aaaaaagcaa gaaaagcttt 480 taaacaaaag cgaatataaa caaatcatag aaaattttag aaaagaacaa gcaggaaagg 540 gctttacaaa agagtttttt aaagacttat cggagttaaa aaagaacttt caagaagtta 600 atgaaactag cttaagtgag cttttaaacg atattttaga aaaacatcga gagtatatcg 660 aagaagtaaa aaaagaaaat atagctaaaa tcgacaatac taatttaaac gcacaaaatg 720 agccattaaa tcaaaaagaa caaaaaaacg atacaaatat cgacttaatc aaagaaaatc 780 aatttaaaag cgatttaaag ccattaaatg agctagaaaa agaaaatcaa atactaaaaa 840 atcaaattga agtaatgaaa gaagtctttg aacctgttat gagaagatgg aaaaatcaag 900 ctgaacgcat taaaaaaata gatatcatct taccaaatga aaaagaaaaa actacaaaag 960 aagcttacga agctcatata aaattagaaa aattatctaa aataggcgtt tttacttatg 1020 ataatgctaa aataatctta gataaaatta atcaattcat aaaaactttt caaaacaaaa 1080 gataacttat cccctttttt tattaactta gcaaatcgca cctttggtcg tttgatttgc 1140 aaaaataggg tgcggggttg tgaagttgcc tagagcaacg aacgaacaag accccgccct 1200 aattgtataa aaggaaaaaa tttttttaat attttatcag gtaaaaaaaa ttgacaaaaa 1260 agcaaaattt ttttgtggtt tctctttttt aaatttttta tatatttttt tattattttt 1320 agggggcttt ctaagcccta tatagcagtg gctagcgaaa tattaagggg gcaaatctaa 1380 actattaagg gggcaaatct aaactattaa gggggcaaat ctaaactatt aagggggcaa 1440 atctaaacta ttaagggggc aaatctaaac tattaagggg gcaaaatata ttgacaatag 1500 caccttaata tgttataata aaaaatccgc cttgagtttt cactcttggc ggaaatccat 1560 aacttaggac atagaatgaa aaaacattct aagcgtctta aagtagtatt gtatctaaat 1620 ttcaagcttt aaaatgatga tatttttatg aaataagacc gcagggatta acccctgtcc 1680 tagtatggat aagcacaagg aaaatctatg agcgatatag ttaaatacca taatgatttt 1740 aataaaataa aattacctag ctttacagaa atcgaacaag atttattatg cggattaatg 1800 gtaaaactta aagaagaaaa aaacaaagta acattttatc ctagcgattt aagaaacatt 1860 cttaaaagca gttatgataa tgaaagttta ttaaaatttg catcttcctt aaaagaaaag 1920 ttttttaaag cagattttac aataatagaa agaacaacta ggggagataa agaagtagaa 1980 gcacatagaa caataaatct ttttacagaa tttgcaattt atgtttataa aggttatgtt 2040 ttagaaaaat caaacgaatt agaaagcatt gaaatacaag ttaatccacg ctttgagtat 2100 attttaaata aattaacagc taattttaca gcttttgaat tagctgaatt tgtcgcatta 2160 agtggaaaat acacaaaaac tctatataga cttttaaaac aatacagaag cactggtaaa 2220 gtttattttg agtgggaaga gtttaaaaga attatggata taccacaaga ttatagacaa 2280 agtgaaatcg acaaaagaat tatcaaacct gctataaaag aactttctaa agaacgcaat 2340 cttttcgacc aaataagagt tccttttaaa aatcttgctt atgaaaaaga taaagcaaaa 2400 agcagggggc ggggtggtaa ggttgtcggt attgaattta catttaagcc cgaaaatgta 2460 gaaatgcaaa aaattgaaaa caaagcttta aacaatgcaa gtgaagaaga aaagatttta 2520 aatacttgca ataatatgtg tatatctcaa atgaaatttg aatatgaaaa taaaatatat 2580 aaaactaatt cttacaactt tgataaatta gtattttatg cagtagaatt aagcgaagat 2640 gattttggaa atcaaatacc agcaaatcat aagtctttta aatgtgaaaa taaagagcag 2700 ttttttaaaa tgattaaaac tttttctaac aatttaagat aaaaaaaaag gggtaaggta 2760 tctatggaaa aagaacaaat aatcgaagtg gaaattccga acagattatc ggggaaaatg 2820 aaaagggacg ggatagagag aatagcgaga gctttaccga aagcaacgga agacaatatg 2880 ggggatatac ctttatggct tctttacgat ttagcgatag tttgctacga actaaatttg 2940 caggaagaat tacagaaggt attgatagaa atacagatga acctagaaat gaaacaagaa 3000 gccaaagaga tgaagataaa agcagactta gcagagcaga gagcagagag agcagagcag 3060 aaagcgaaag aagcgaagca aatttatcaa caagcaaaat catttatgga aagaatggag 3120 aaaaaatacg gggtataaat aatttataaa aactcttttt attgaacttg tgaaataaaa 3180 agcaaattac tacattaatt ttattaaggt ggttaatttg caaattaacc acctttaaaa 3240 gagtgtgtaa tttgtttttt tgaaagtttt ttaatcggca agctatttaa aaaactccaa 3300 aaaaaataaa aatgtgttat aatttttaca agtttaaatt atacacattt tttaaaggaa 3360 ttactataga cttacaagaa aaaagaaaag cagtttctaa gtttaataaa cgattaaaag 3420 atttagcaaa attagaagca gaaaaaaaac gccttgaaat taaaattgaa aatgctaaaa 3480 aaataataca agaatttgat attaaaataa atggcacaaa tatctagtat taattttaaa 3540 aaatctaatc atatacaaac tcaacacaac gaccgagact taccgccaaa ttatttaatc 3600 ggcggtgaag tagaatgtaa tcacaaccac caag 3634 //