ID AB158475; SV 1; linear; genomic DNA; STD; VRL; 5097 BP. XX AC AB158475; XX DT 01-DEC-2004 (Rel. 82, Created) DT 01-DEC-2004 (Rel. 82, Last updated, Version 1) XX DE Minute virus of canines DNA, complete genome, strain:HM-6. XX KW . XX OS Canine minute virus OC Viruses; ssDNA viruses; Parvoviridae; Parvovirinae; Bocavirus. XX RN [1] RP 1-5097 RA Oshima T., Kishi M., Mochizuki M.; RT ; RL Submitted (05-JAN-2004) to the INSDC. RL Takahisa Oshima, Kyoritsu Seiyaku Corporation; Takamihara 2-9-22, Tukuba, RL 300-1252, Japan (E-mail:t_oshima@kyoritsuseiyaku.com, Tel:81-29-872-3361, RL Fax:81-29-874-1619) XX RN [2] RX DOI; 10.1007/s11262-004-7430-3. RX PUBMED; 15550767. RA Ohshima T., Kishi M., Mochizuki M.; RT "Sequence analysis of an Asian isolate of minute virus of canines (canine RT parvovirus type 1)"; RL Virus Genes 29(3):291-296(2004). XX FH Key Location/Qualifiers FH FT source 1..5097 FT /organism="Canine minute virus" FT /strain="HM-6" FT /mol_type="genomic DNA" FT /db_xref="taxon:329639" FT CDS 429..2579 FT /codon_start=1 FT /transl_table=1 FT /gene="NS1" FT /product="non structural protein 1" FT /note="replication protein; nickase; helicase; NS1" FT /db_xref="GOA:Q5R2A7" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="UniProtKB/TrEMBL:Q5R2A7" FT /protein_id="BAD72954.1" FT /translation="MPGPDSPVEQTSFLETHGPDSSYHLNLSHCAHMAAYSVFSVKQGR FT APPVASIFVQSEIGERDLHLHLVLGGQGLNKYEAKAFRHQLQYKFCENLITVLERHVNE FT GTTSDPEMCSVLIKCLSKAKNEEHAYCTILQYKSRSGDLYACRVDPVEFICNYLLRKNL FT KYYTCMDPDKATQHIPYFDATSKTYAVTLANGKWVPTDCRKQWLNILRHNVIQKNEPIF FT AGEMFDVLPKVPESSWKIDMLSSQSKITKRETLMIDCMNRCEQNYWLTYEDLVNGCADL FT VVMLECQSGGNKLIEQILSMVHIKMTQKYTALSYILAKYDPIPFTTDNKVWKLLTLQGY FT NPWQFGHWLLCVLDKKAGKQNTINFYGPASTGKTNLAQAIVNAVQLYGCVNHQNKNFVF FT NDCTAKLICWWEECIMTTDWVEQAKCIMGGTQFRIDRKHKDSHLLPQTPLIISTNHNIY FT EVTGGNTTTHVHSMPLRERVVQFNFMKQLESTFGEIEPTDVVALLQVCYKKYSVSLSDF FT HRTWNIKKTPNDFPLTVVCSNHTQDLIVFESGLCGSCGGYYPLETWNENNCQNTEEEDI FT TGEILNHKNVSNEEFEEWITNFDFSLLDSPETSNSTTPSRKRTLAEETTTSPPKKQRKT FT EHKVLIDWSSQPSTSSERYVYETYNQEIKSEEPESQSTGLTPSEWGERLGVISQGMDEE FT PIVLHCFETLDWEENNADACIQ" FT CDS 2389..2949 FT /codon_start=1 FT /transl_table=1 FT /gene="NP1" FT /product="non structural protein" FT /function="unknown" FT /db_xref="UniProtKB/TrEMBL:Q5R2A6" FT /protein_id="BAD72955.1" FT /translation="MSTKHITKRSRARSRSRSPQGSRHQSGEKDLVSFHRGWTRNQSSS FT TASRHSTGRKTTPMHVFNEHKSRSKEPLPAFCGFYWHSTRLARCGTDWIFNEGKPKFKS FT VCHENKITWDQCREMLFEFKKVIDQKYRNIMYHMGRGGFCQKCCYWDDVYTKHLANVND FT VLTQDLSDAEMLSAAMEVDGSSE" FT CDS 2933..5044 FT /codon_start=1 FT /transl_table=1 FT /gene="VP1" FT /product="virus protein 1" FT /note="minor capsid protein; VP1" FT /db_xref="GOA:Q5R2A5" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q5R2A5" FT /protein_id="BAD72956.1" FT /translation="MAPPNRKPGGWVVPGYKYLGPFNPLDNGKPINAVDKAAQKHDFAY FT QSYINKGENPYLNFNKADSDFIEDLKNDSSFAGWLGKSAFRLKRILAPHLKENTPPAKR FT VAGNSRQDRAQKRKLYFASSNKNSKQARMEPQETENTVEADAGIAGRAGGGGGPGGGGS FT GGGSGVGVSTGGWEGGTLFGDNRVITVNTRQWYAPIYNGHRYTKLEGTGNSFWKGIKTP FT WGYFNFNAYDSHFSPQDWQRLTNEYKRWRPKKMMVKIYNLQIKQVVTLQGDTLYNNDLT FT AGVHIFCDGSHQYPYSQHPWDAGTMPELPYKVWLLENYGYFQFQGDLIDTGVDGGSPDV FT ENVEKEIAKSAPFYILENANHEVLRTGEETNFHFNFDCGWVNNDRAYCPLQADFNPLVK FT TRRYFATRNNYNNSGKFVYTRYSPYNKPSQWMPGPSLGYIGNTQSAATPEQALGPVTVV FT TAPPGTSAYGAFTEQQSKTNQQSASNATWSGYDVSPVNCARSAFDKIGLAYDSAPESEL FT EEKISMRDIDNDMSRWGQVFVQDGTNKEISTDNTGQGGNTRQNMAELKNVWMFPNQAWD FT STPISRDFPIWVKSPNTDKHTLFDSSDGTLPMSHPPGTIFVKVAKIPIPTQTNTDSYLT FT LYVTGQVTCTIEWEVERFMTKKWRPESRNDVSSFRDAFLYTVGRCGTFHTPERFLEGMP FT TRRGINKTL" FT CDS 3329..5044 FT /codon_start=1 FT /transl_table=1 FT /gene="VP2" FT /product="virus protein 2" FT /note="major capsid protein; VP2" FT /db_xref="GOA:Q5R2A4" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q5R2A4" FT /protein_id="BAD72957.1" FT /translation="MEPQETENTVEADAGIAGRAGGGGGPGGGGSGGGSGVGVSTGGWE FT GGTLFGDNRVITVNTRQWYAPIYNGHRYTKLEGTGNSFWKGIKTPWGYFNFNAYDSHFS FT PQDWQRLTNEYKRWRPKKMMVKIYNLQIKQVVTLQGDTLYNNDLTAGVHIFCDGSHQYP FT YSQHPWDAGTMPELPYKVWLLENYGYFQFQGDLIDTGVDGGSPDVENVEKEIAKSAPFY FT ILENANHEVLRTGEETNFHFNFDCGWVNNDRAYCPLQADFNPLVKTRRYFATRNNYNNS FT GKFVYTRYSPYNKPSQWMPGPSLGYIGNTQSAATPEQALGPVTVVTAPPGTSAYGAFTE FT QQSKTNQQSASNATWSGYDVSPVNCARSAFDKIGLAYDSAPESELEEKISMRDIDNDMS FT RWGQVFVQDGTNKEISTDNTGQGGNTRQNMAELKNVWMFPNQAWDSTPISRDFPIWVKS FT PNTDKHTLFDSSDGTLPMSHPPGTIFVKVAKIPIPTQTNTDSYLTLYVTGQVTCTIEWE FT VERFMTKKWRPESRNDVSSFRDAFLYTVGRCGTFHTPERFLEGMPTRRGINKTL" XX SQ Sequence 5097 BP; 1690 A; 1016 C; 1101 G; 1290 T; 0 other; ctccatataa agacaatatc aaaatggagg acggaagtgt aattctgctt actcatagtt 60 atataacaca cttatgaata tgctaataca gagattagaa tatccaatca tattgaaaca 120 caagtactgc agtagtagat gtggctgctt ctgattggaa gataagagta tataaggaaa 180 ggtatttcct gcgtttgttc atttcgcttc cggacttcgt cgagagaaca tctctgactt 240 cgaaccgtga gtgatgtcta cgcttccaat cgcgtcttta gacgacctta ctcaagtttt 300 ctactcctgc ttatacttat atcttgaaat ttccatatgt ggggtggaaa gctgatgaag 360 ttcgtctgca aagagcactg ggcggtattc ggggagacgc tctcgatgat ccatccgtgt 420 acatcgggat gcctggtccc gatagtccgg ttgagcagac gagttttctc gagacacatg 480 gacctgattc cagttatcat cttaacctgt cgcattgtgc acatatggct gcctatagcg 540 tattctccgt taaacaggga agagcacctc cggtggctag catttttgtg cagagcgaga 600 ttggcgaacg cgatttgcac cttcatttgg tccttggagg acaggggcta aataaatatg 660 aggctaaagc gttccgccat caactacaat acaaattctg tgaaaatcta atcaccgttc 720 tagagagaca tgtaaacgaa ggaactactt ctgatcctga aatgtgttca gttcttataa 780 aatgtctgtc caaagctaag aatgaagaac atgcatactg tactatttta caatataaaa 840 gcagaagtgg ggacctctat gcatgcagag tagatccagt agaatttatc tgcaactatc 900 tacttcgaaa aaaccttaaa tactacacct gtatggatcc agataaagcc acacaacata 960 ttccctattt tgatgcaaca agtaagactt acgctgtgac cttagctaat ggaaaatggg 1020 ttccaacaga ctgtagaaaa caatggctaa atatacttcg ccacaacgtg atccaaaaaa 1080 acgagccaat ctttgccgga gaaatgtttg atgttttgcc taaggtacct gaatcttctt 1140 ggaagattga tatgctttct tctcaatcta aaataactaa aagagagact ttaatgattg 1200 actgtatgaa tagatgtgag caaaattact ggttaacata tgaagacctt gtaaatgggt 1260 gcgccgatct cgttgttatg ttagaatgtc aatcgggcgg aaacaaactt atagaacaga 1320 tacttagtat ggttcatata aaaatgacgc aaaaatatac tgctcttagt tatattttag 1380 caaaatatga tccaatccca tttacaactg acaataaagt atggaaatta ttaactttac 1440 agggatataa tccttggcaa ttcggacact ggttattgtg tgtcctagat aaaaaggcgg 1500 gaaagcagaa cacaataaac ttttatggtc ctgcaagtac cgggaaaaca aatttagccc 1560 aagccattgt aaacgctgtt cagttatatg gatgtgtaaa tcaccaaaat aagaactttg 1620 ttttcaatga ttgtactgca aaattaatat gttggtggga agaatgtatc atgactactg 1680 attgggtgga acaagcaaaa tgtataatgg ggggcacaca gtttagaata gacagaaaac 1740 acaaggattc acatctatta ccgcaaacac cgttaataat atcaaccaat cataatatat 1800 atgaagtcac aggaggcaat accactacac atgttcattc tatgccactt cgggagagag 1860 ttgttcaatt taactttatg aaacaacttg aaagcacgtt cggtgaaata gagccaacag 1920 acgttgttgc attattacaa gtatgttaca aaaaatactc agtttcattg tcagactttc 1980 atcgtacttg gaacattaaa aaaactccaa atgactttcc attgacggtt gtctgttcaa 2040 atcatacaca ggatctaatt gttttcgaga gtggtctatg cggatcgtgc gggggctatt 2100 atccactaga gacgtggaat gaaaataact gccaaaatac agaagaagaa gacataacag 2160 gtgagatcct taatcacaaa aatgtatcca atgaagaatt cgaggaatgg atcactaact 2220 tcgatttttc gctcttagac tctccagaaa catcaaactc taccacacca tcaagaaaac 2280 gaacacttgc ggaagagaca acaacctcgc caccaaaaaa acaacgcaag acagagcaca 2340 aggtattgat cgattggtcc tcacaaccat ctacctcatc cgaacgatat gtctacgaaa 2400 catataacca agagatcaag agcgaggagc cggagtcgca gtccacaggg ctcacgccat 2460 cagagtgggg agaaagactt ggtgtcattt cacaggggat ggacgaggaa ccaatcgtcc 2520 tccactgctt cgagacactc gactgggagg aaaacaacgc cgatgcatgt attcaatgaa 2580 cataaaagca gaagcaagga acctcttcct gcattctgcg gtttctattg gcatagtact 2640 agactagctc gatgtgggac tgactggatt tttaatgaag gaaagcctaa attcaaatca 2700 gtatgtcacg aaaataaaat cacatgggat caatgtagag aaatgttatt tgaatttaaa 2760 aaggtgatag atcaaaaata tagaaatatt atgtatcaca tgggaagagg ggggttctgt 2820 caaaaatgtt gttactggga tgatgtgtat acaaaacact tggctaatgt aaacgatgtt 2880 ctcacacagg atctatctga cgcagaaatg ctttcagctg caatggaggt agatggctcc 2940 tccgaataga aaaccaggtg gttgggtcgt tcctggatat aaatatcttg gaccattcaa 3000 tccattagat aatggcaaac ccataaacgc ggttgacaag gcagctcaaa aacacgattt 3060 tgcttatcaa tcctatatta ataaaggtga aaatccatat ttgaatttca ataaagctga 3120 ttctgatttt attgaggatc tcaaaaacga ttcgtccttt gccgggtggc tgggaaaatc 3180 tgcatttaga cttaaacgta ttttggctcc gcatctaaaa gaaaacactc ctcctgctaa 3240 aagagtggcc ggaaacagta gacaagatag ggcgcaaaag aggaaactct attttgcgag 3300 ttctaacaaa aactctaaac aggctaggat ggaaccgcag gaaactgaga acactgttga 3360 ggctgatgcg ggcattgcgg ggcgtgctgg gggtggtggt ggacctggtg gaggtggatc 3420 gggcggtggc tccggggtcg gagttagtac cggtgggtgg gaaggaggaa cactgttcgg 3480 agataataga gtcatcacag ttaacacacg acagtggtat gcacctatat acaacggaca 3540 tagatacacc aaacttgagg gaaccggaaa ctcattctgg aaagggataa aaactccatg 3600 gggatacttt aattttaacg cgtacgactc gcacttttca ccacaagact ggcaacgtct 3660 cacaaatgaa tacaaaagat ggagaccaaa aaaaatgatg gtaaaaatat ataacttaca 3720 aataaaacag gtagttacac tgcaggggga cactttatat aataatgatc ttacagcagg 3780 agtacacatt ttttgtgacg gaagtcatca atatccatat tcccaacatc cctgggatgc 3840 tggaacgatg ccagaacttc cctataaagt ctggttgctg gaaaactatg gttacttcca 3900 attccaaggt gacctaatag acacgggcgt ggacggtggt tctccagacg ttgaaaatgt 3960 agaaaaggaa attgcgaaat ctgctccttt ctacattctc gaaaatgcaa accatgaggt 4020 gttacgtact ggggaggaaa caaacttcca ttttaacttt gattgtgggt gggtcaataa 4080 tgaccgggca tactgcccat tacaggcgga ctttaatcca ctggttaaaa ccagacgcta 4140 cttcgctaca cgaaacaact acaacaactc aggaaaattc gtgtacacgc gatacagtcc 4200 atataacaag ccatcacagt ggatgccagg accatcgctt ggatacattg gaaacacaca 4260 aagcgcggct actccggaac aagccctcgg accagtaact gtagtgactg ctccacctgg 4320 gacatcggct tacggtgcct tcactgagca acaatcaaaa accaatcaac agtctgcatc 4380 taatgcaaca tggtccggtt atgatgtcag tccagtaaac tgcgcacgct ctgcattcga 4440 taagatagga ctagcctatg actctgctcc ggaaagtgag ttggaggaga aaatatctat 4500 gagagacatc gacaacgaca tgagccgatg gggtcaagtg ttcgtgcaag acggaacaaa 4560 caaggaaata tcaacagata acactggtca agggggaaac acacgacaaa acatggcaga 4620 gttaaaaaat gtatggatgt tccccaatca agcatgggat tcgacgccca tcagcaggga 4680 cttcccaatt tgggtaaaat caccaaacac tgacaaacat acactattcg atagctcaga 4740 tggaactctg cctatgtcac atccgccggg aacaatattt gttaaagttg ctaaaatacc 4800 aataccaact cagacaaata cagattcata tttaactctg tatgttaccg gtcaggtcac 4860 atgcacaata gaatgggagg tcgagagatt tatgaccaaa aaatggagac ccgagtcaag 4920 gaacgacgta tcatctttca gagacgcgtt cctatacaca gtgggacgct gcggaacatt 4980 tcatacaccg gaaaggttcc tggaaggaat gccaacaaga agaggcatca ataaaacatt 5040 gtaattggtt taatctttac cttgtagtag tataccgtca ccactggggt gctttca 5097 //