ID AB040749; SV 1; linear; genomic RNA; STD; VRL; 8280 BP. XX AC AB040749; XX DT 15-AUG-2001 (Rel. 68, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Aichi virus genomic RNA, complete genome. XX KW polyprotein. XX OS Aichi virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; OC Picornaviridae; Kobuvirus. XX RN [1] RP 1-8280 RA Sasaki J., Taniguchi K.; RT ; RL Submitted (27-MAR-2000) to the INSDC. RL Jun Sasaki, Fujita Health University, Department of Virology and RL Parasitology, School of Medicine; Dengakugakubo 1-98, Kutsukake-cho, RL Toyoake, Aichi 470-1192, Japan (E-mail:jsasaki@fujita-hu.ac.jp, RL Tel:81-562-2486, Fax:81-562-4008) XX RN [2] RX DOI; 10.1128/JVI.75.17.8021-8030.2001. RX PUBMED; 11483747. RA Sasaki J., Kusuhara Y., Maeno Y., Kobayashi N., Yamashita T., Sakae K., RA Takeda N., Taniguchi K.; RT "Construction of an infectious cDNA clone of Aichi virus (a new member of RT the family Picornaviridae) and mutational analysis of a stem-loop structure RT at the 5' end of the genome"; RL J. Virol. 75(17):8021-8030(2001). XX FH Key Location/Qualifiers FH FT source 1..8280 FT /organism="Aichi virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:72149" FT CDS 745..8043 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:Q91QP4" FT /db_xref="HSSP:1RDR" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:Q91QP4" FT /protein_id="BAB62889.1" FT /translation="MAATRVSRSVLAAVAHSAAHRTYHTVLDCYDRLYLNTNPHLSYPL FT PKNSSFPCPFCQYDEQNEVLSPESLRGEGAEPCWKCSQDKPRRKYNTTPPEDWLYDSDV FT QSWFYPETYYSDLQQKFFDKLALLSLPGAYQAKTPEERALAGALTQLLNFPSTPPLTLP FT TTNLQRQGNSVTNIYGNGNNVTTDVGANGWAPTVSTGLGDGPVSASADSLPGRSGGASS FT EKTHTVSGSSNKVGSRFSKWWEPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPA FT APSSTANPQPSLIALNPSATQSGNASILTGSTAPSLLAYPTATPVPLPNPDEPSQPGPS FT GDRTWLLDTVTWSQEFTRGWNIAGSNGMQWTGLESLIFPVSTDTNWTSTSSPTAYPLPF FT SFVRAYPDSSWAAMYNTHSMWNCGWRVQVTVNGSQFHAGALILYMVPEATTHAIQTARD FT NAGFVFPYVILNLYESNTATIEVPYISPTPNTSSGLHAPWTFYLQVLSPLNPPPSLPTS FT LSCSIYVTPVDSSFHGLRYLAPQHWKTRAVPGAGTFGSAVAGQELPLCGVRAYYPPNAY FT IPAQVRDWLEFAHRPGLMATVPWTMADEPAERLGIFPVSPSAIAGTGAPISYVISLFSQ FT WRGELAAHLLFTGSAQHYGRLVVCYTPAAPQPPSTMQEAMRGTYTVWDVNAASTLEFTI FT PFISNSYWKTVDVNNPDALLSTTGYVSIWVQNPLVGPHTAPASALVQAFISAGESFNVR FT LMQNPALTSQTLTEDLDAPQDTGNIENGAADNSPQPRTTFDYTGNPLPPDTKLENFFSF FT YRLLPMGGSGAPSLSFPADEGTIIPLNPINWLKGADVSGIAAMLSCFTYIAADLRITLR FT FSNPNDNPATMLVAFAPPGATIPLKPTRQMLSNFYMAEVPVSAATSTMVSFSIPYTSPL FT SAIPTSYFGWEDWSGTNFGQLSSGSWGNLMLIPSLSVDSAIPFDFQLSCWVAFGNFKAW FT VPRPPPPLPPLPTPAANAERTVAVIKQGAASATPDVDPDDRVYIVRAQRPTYVHWAIRK FT VAPDGSAKQISLSRSGIQALVALEPPEGEPYLEILPSHWTLAELQLGNKWEYSATNNCT FT HFVSSITGESLPNTGFSLALGIGALTAIAASAAVAVKALPGIRRQGLLTLSADTETNQT FT LNKITESVNQAAQVVSQFDLSGPANSVSLAASDIREAAHKVASSLNGFTDVIADIKDSL FT FTRVSDAVESGVATFLTWLVKLFGYLLVLFGSPTPMSISGLLVIICADLAPHAREFFTA FT SGNVLSSLYYWIASKLGLSVTPQECERATLEPQGLKDFNDGALAMRNVEWIGETAWKWA FT HRLLDWIRGKAKTDPQAKLADVHDEIMLHYSDSILALGSEKLPIDHITKSISRCRELVS FT IAQEAKSGPHSSFLNQAIKNYTLAISQHRKCQTGPRPEPVVVYLYGPPGTGKSLLASLL FT AQTLSQRLAGTPDDVYSPSSASCEYFDGYTGQTVHFIDDIGQDPEGRDWANFPNLVSSA FT PFIVPMASLEEKGTHYTSKVIVVTSNFHEPNERAARSMGALRRRVHLRINVTSNGVPFD FT PTNALNPIPGTQSKYFTAQTPLTLFQSNTVRLDRDSIWTPTFTNMDELVDAIVTRLDRS FT TGVSNSLASLIRRQGNRVIDAEPREIPLEYADDLLEAMAHHRPVPCSLGLSQAIANNTP FT IQQISETFWKYRKPIFTCTTFLAVLGFLCSVIPLARSLWKSKQDTPQEPQAAYSAISHQ FT KPKPKSQKPVPTRHIQRQGISPAVPGISNNVVHVESGNGLNKNVMSGFYIFSRFLLVPT FT HLREPHHTTLTVGADTYDWATLQTQEFGEITIVHTPTSRQYKDMRRFIGAHPHPTGLLV FT SQFKAAPLYVRISDNRILDLDFPGVVVCKQAYGYRAATFEGLCGSPLVTDDPSGVKILG FT LHVAGVAGTSGFSAPIHPILGQITQFATTQQSLIVPTAEVRPGVNVNRMSRLHPSPAYG FT AFPVKKQPAPLKRNDKRLQEGVDLDTQLFLKHGKGDVTEPWPGLEAAADLYFSTFPTSL FT PVLTQEQAIHGTPNMEGLDMGQAAGYPWNTLGRSRRSLFDEVEPGVFVPKPELQAEINQ FT TLEDPDYVYSTFLKDELRPTAKVEQGLTRIVEAAPIHAIVAGRMLLGGLIDYMQGRPGE FT HGSAVGCNPDVHWTSFFYAFSEFSQVYDLDYKCFDATLPSAVFTLVADHLTRITGDPRV FT GRYIHSIRHSHHIYGNRMYDMIGGNPSGCVATSILNTIINNICVLSALIQHPDFSPSRF FT HILAYGDDVIYATEPPIHPSFLREFYQKHTPLVVTPANKGQDFPPTSTIYEVTFLKRWF FT VPDDVRPIYIHPVMDPDTYEQSVMWLRDGDFQDVVTSLCHLAFHSGPKTYAAWCMKVRE FT QCLKSGFAPNFLPYSYLQLRWLNLLAA" XX SQ Sequence 8280 BP; 1611 A; 3127 C; 1755 G; 1787 T; 0 other; tttgaaaagg gggtgggggg gcctcggccc cctcaccctc ttttccggtg gtctggtccc 60 ggaccaccgt tactccattc agcttcttcg gaacctgttc ggaggaatta aacgggcacc 120 catactcccc ccacccccct tttgtaacta agtatgtgtg ctcgtgatct tgactcccac 180 ggaacggacc gatccgttgg tgaacaaaca gctaggtcca catcctccct tcccctggga 240 gggcccccgc cctcccacat cctcccccca gcctgacgta tcacaggctg tgtgaagccc 300 ccgcgaaagc tgctcacgtg gcaattgtgg gtcccccctt catcaagaca ccaggtcttt 360 cctccttaag gctagccccg gcgtgtgaat tcacgttggg caactagtgg tgtcactgtg 420 cgctcccaat ctcggccgcg gagtgctgtt ccccaagcca aacccctggc ccttcactat 480 gtgcctggca agcatatctg agaaggtgtt ccgctgtggc tgccaacctg gtgacaggtg 540 ccccagtgtg cgtaaccttc ttccgtctcc ggacggtagt gattggttaa gatttggtgt 600 aaggttcatg tgccaacgcc ctgtgcggga tgaaacctct actgccctag gaatgccagg 660 caggtacccc acctccgggt gggatctgag cctgggctaa ttgtctacgg gtagtttcat 720 ttccaatcct tttatgtcgg agtcatggct gcaacacggg tttcacgatc tgtgctcgct 780 gctgtggctc actctgctgc tcaccgcacc taccacactg tccttgactg ctatgatagg 840 ctttacctca acaccaaccc ccatctctct tatccccttc ccaaaaactc ttccttccct 900 tgcccgttct gtcagtacga cgagcagaat gaggtcctct ccccagagtc tctccgtggc 960 gagggagctg aaccctgctg gaagtgctca caggacaaac cccgccgcaa gtacaacacc 1020 acccctcctg aagactggct ctatgattct gatgtccaat cctggttcta tcctgaaaca 1080 tactactctg accttcagca aaagttcttt gacaaattgg ctctcctctc tcttccaggt 1140 gcctaccaag caaagacccc ggaggagcgt gccctcgcgg gcgcgctcac ccaactcctc 1200 aacttcccct ccaccccccc tctcacactc cctaccacta acctccaacg gcaaggcaac 1260 tcggtcacca acatctacgg taacggcaac aacgtcacca ctgacgttgg cgccaacggt 1320 tgggccccca cggtctcaac tggcctaggt gatggtcccg tctctgcctc cgccgactcc 1380 ctccccgggc gatccggagg tgcctcctcc gagaaaaccc acaccgtttc cggctcctcc 1440 aacaaagtcg gatcccgctt ttccaagtgg tgggaaccag cagccgcccg cgcttcggaa 1500 tccgccaccg actcggctat cgagggaatc gatgctgccg ggaaggccgc ctccaaggcc 1560 atcacgcgga agctggaccg ccccgccgcc ccctcctcaa ccgccaatcc ccaaccatct 1620 ctcatcgctc tcaacccttc tgccacgcaa tccggcaacg cttccatctt gaccggatca 1680 actgctccct ccctcctcgc ctaccccacc gccacccctg ttccccttcc caaccccgat 1740 gaaccctccc aacccggacc atccggcgac cgcacctggt tgttggatac agtcacctgg 1800 tcccaggagt tcacccgcgg ctggaacatc gcaggctcca atggcatgca atggaccggc 1860 ctggaatccc ttatcttccc tgtctccact gacaccaatt ggacctccac ctccagtcct 1920 accgcatatc ccctcccttt ctccttcgtg cgtgcttacc cagactcctc ctgggctgcc 1980 atgtacaaca cccactccat gtggaattgc ggttggcgcg ttcaagtgac cgtcaacggc 2040 tcacagttcc atgccggagc ccttatcctc tacatggtcc ctgaagccac cacccatgcc 2100 atccaaacgg ctcgggacaa cgctggcttt gtcttcccct atgtcatcct caatctctat 2160 gaaagcaaca ccgctaccat agaggtcccc tacatctccc ccacccccaa tacctcgagt 2220 ggactccacg ccccgtggac gttctacctc caggtgctct cacccctcaa tcctccccct 2280 tctctcccca cttccttatc ctgctctatc tatgtcaccc ccgttgactc ctctttccac 2340 ggtctccgct acctcgcccc acagcactgg aagactcgcg ccgtcccagg tgcgggcact 2400 ttcggatctg ccgtggctgg ccaggaactc cctctctgtg gagtccgtgc ctactacccc 2460 cccaatgcct acatccctgc ccaggtacgc gactggcttg agttcgccca ccggcctggt 2520 ctcatggcca cagtgccgtg gaccatggcg gacgagccgg ccgagcgcct cggtatcttc 2580 cccgtctctc ccagtgctat cgctgggact ggcgccccca tctcctatgt tatttctctc 2640 ttctcccagt ggcgcggtga actcgccgcc cacctcctct tcactggctc cgctcagcac 2700 tacggccgcc tggtcgtgtg ctacactcct gctgcccccc aacccccctc caccatgcag 2760 gaagcgatgc gcggaacata caccgtatgg gacgtcaacg ctgcctcaac cctggagttc 2820 accatcccct tcatctctaa ctcctactgg aaaacagtgg acgttaacaa ccccgacgct 2880 ctgctgtcca ccaccggcta tgtttccatc tgggttcaaa acccgctagt cggaccccac 2940 accgcccctg cgtcggccct cgtgcaggca ttcatctccg caggtgaatc cttcaacgtg 3000 cgactgatgc aaaaccccgc cctcacttcc caaaccctca ccgaagacct cgatgcaccc 3060 caagacaccg ggaacattga gaatggtgcg gctgacaact ccccgcagcc ccgcaccacc 3120 ttcgactaca ccggaaaccc cctccctcca gacaccaaac tggaaaactt cttctccttc 3180 taccgcttgc tgcccatggg tggcagcggt gctccatctc tttctttccc cgctgacgaa 3240 ggcacaatca tcccactcaa cccaatcaat tggctcaaag gggcggacgt ctccgggatc 3300 gctgcgatgc tatcgtgctt cacgtacatc gctgcggacc tgcgaatcac gctccgcttc 3360 tccaacccaa atgacaaccc tgccaccatg cttgttgcct tcgctccccc tggcgccacc 3420 atccccctca aacccacgcg ccaaatgctc tccaacttct acatggcgga ggtcccagtc 3480 tccgctgcca cctccaccat ggtctctttc tccatcccct acacctcccc cctctctgcc 3540 atccccacct catacttcgg atgggaggac tggtcaggta ccaactttgg ccagctctcc 3600 tccgggtcat ggggaaacct catgctcatc ccctctctct ctgtcgactc tgctatcccc 3660 ttcgacttcc agctctcttg ctgggtcgcc ttcggcaact tcaaagcctg ggtcccccgc 3720 ccacctccac ctctcccccc cctccccacc cctgccgcga acgcggaacg cacagtggcc 3780 gtgatcaagc agggcgccgc ctcagcgact cccgatgtgg accccgacga tcgggtctac 3840 atcgtgcgcg cgcagcgccc cacctacgtc cactgggcca tccgcaaggt ggcccccgac 3900 ggcagtgcca aacagatctc gctgtcccgc agcgggatcc aggcactggt cgccctcgaa 3960 ccccccgagg gtgaacctta cctcgaaatt ctcccctccc attggaccct tgctgaactc 4020 caacttggca acaagtggga gtacagcgcc accaacaact gtacccactt cgtcagctcc 4080 atcactggcg aatccctccc caacaccggc ttctccctgg ccctcggaat cggtgccctc 4140 accgccatcg cagcctcggc tgctgttgcc gtgaaagcgc tcccaggcat caggcgacag 4200 ggtctcctca ccctctctgc cgataccgag accaaccaga ccctcaacaa gatcactgaa 4260 tctgtcaacc aagctgccca ggtcgtctcc caattcgatc tgagcggccc tgcaaattct 4320 gtctcccttg ctgcttctga catccgcgag gctgcccaca aagtggcctc ctccctcaat 4380 ggcttcactg acgtcatcgc tgacatcaaa gattccctgt tcaccagggt gtctgacgct 4440 gtcgagagcg gtgtcgccac tttcctcact tggctcgtca aactctttgg ctacctcctt 4500 gttctctttg gctctccaac ccccatgtcc atctccggtc tcctcgtcat catctgtgcc 4560 gaccttgccc cccacgctcg tgaatttttc accgcctctg gaaatgtcct ctcctcactc 4620 tactactgga ttgcctcaaa attaggcctg tccgtcacgc cccaagagtg tgaacgggca 4680 acccttgaac ctcaagggct caaagacttc aacgacggcg cactcgcaat gcgcaacgtc 4740 gagtggattg gtgagaccgc ctggaaatgg gcccaccgcc tccttgactg gatccgcggt 4800 aaggccaaga cagaccccca ggccaaactc gccgacgtcc acgatgaaat catgctccac 4860 tactcagact ccatattggc tctcggatct gagaaactcc ccattgatca catcactaaa 4920 tccatctccc gctgccgtga attggtctcc atcgcccagg aggccaaatc cggccctcac 4980 tcttccttcc tcaaccaagc aatcaaaaac tacacccttg ccatctccca acaccgcaaa 5040 tgccagacag gccccaggcc tgaacccgtg gtggtctacc tctacggacc ccccggcact 5100 ggcaaatccc tccttgcttc actcctcgct caaacccttt cccagcgtct tgctgggacc 5160 cccgatgacg tctactcccc ctcctccgcc tcctgtgagt acttcgatgg gtacacgggt 5220 caaaccgtgc actttatcga tgacatcggg caggatccgg aggggcggga ctgggctaat 5280 ttcccaaacc tcgtctcctc tgcccccttc attgtcccaa tggcctccct cgaggagaag 5340 ggcacccact acacctccaa ggtcatcgtg gttacctcca acttccacga gcctaacgag 5400 cgcgccgcgc gctcgatggg cgctcttcga cgccgcgtcc acctgcggat caacgtcacc 5460 tcaaatggag tgccatttga ccctaccaat gccctcaacc ccatccccgg aacccaatct 5520 aaatacttca ccgcccaaac acctctcacc ctattccagt ccaacacggt ccgcctggat 5580 cgtgactcca tctggacccc taccttcacc aacatggacg agttggtgga cgcgattgtg 5640 acccgtctcg atcgctccac cggcgtgtcc aattccctcg cctccctcat cagacgccag 5700 ggcaaccggg tcatcgacgc ggaacccagg gaaatccccc tggaatacgc ggatgatctc 5760 ctggaagcca tggcgcacca ccgccctgta ccatgctccc ttggcctctc ccaagccatc 5820 gcaaacaaca cccccatcca acaaatctct gaaaccttct ggaagtaccg caaacccatc 5880 ttcacttgca ccactttcct cgctgtcctc ggtttcctct gctctgtcat ccctcttgct 5940 cgctccctgt ggaagtccaa acaggacacg ccacaggaac ctcaagctgc ctactctgcc 6000 atctcccacc agaaacccaa gcccaagtcc cagaaacccg tccccactcg tcacatccag 6060 cgccagggaa tctcccctgc tgtccccggc atctccaaca atgtcgtcca tgtcgagtcc 6120 ggcaacggtc tcaacaagaa cgtcatgtct ggcttctaca tcttctcccg cttccttctg 6180 gttcctaccc acctccgtga accccaccac accactctca cggtgggcgc cgacacctac 6240 gactgggcca ccctccagac gcaggagttc ggtgaaatca ccattgttca cactcccacc 6300 tcccgccagt acaaggacat gcggcgcttc atcggcgccc atccccaccc cactggactc 6360 cttgtttccc aattcaaagc tgcccccctc tatgtccgca tctccgacaa ccggatcctg 6420 gaccttgact tccccggagt cgtcgtctgt aagcaggcgt acggataccg cgccgcgacc 6480 ttcgaaggtc tgtgcggttc cccgcttgtt acggatgatc cctccggagt caagattctg 6540 ggcctccacg tcgctggagt cgcgggcacg agcggattct ctgcccccat ccaccccatc 6600 ctcggccaaa tcactcaatt tgccactacc caacaatctc tcattgttcc cactgctgaa 6660 gtccggcctg gcgtcaacgt caaccggatg tcccgcttgc acccctctcc cgcctacggt 6720 gccttccctg tcaagaaaca acccgctccc ctcaagcgca acgacaagcg cctgcaggag 6780 ggcgtcgatc ttgacaccca gctcttcctc aaacacggca aaggcgacgt caccgagccc 6840 tggcccggtc tcgaagctgc tgctgacctc tacttctcca ccttccccac ttcccttcca 6900 gtcctcaccc aggaacaggc catccatgga acaccaaaca tggagggcct ggacatgggc 6960 caggcggctg gatacccctg gaacaccctt gggcgctccc ggcgatccct ctttgacgag 7020 gttgaaccgg gagtgttcgt ccccaaaccc gaactccaag ctgaaatcaa ccagacactt 7080 gaagacccgg actacgtgta ctccaccttc ctcaaggatg aactcagacc aacggctaag 7140 gttgaacagg gactgaccag aatcgtcgaa gctgctccca tccatgctat cgtcgctggc 7200 cggatgctcc tcggtggtct catcgactac atgcaggggc gtcccggcga gcacggtagt 7260 gcggttggtt gcaacccaga cgttcactgg acttccttct tctacgcctt cagcgagttc 7320 tctcaggtat acgatctgga ctacaagtgt tttgatgcta cccttccttc tgctgtcttc 7380 acccttgttg ctgaccatct tacccgcatc accggagatc cccgcgtcgg tcgctacatc 7440 cactccatcc gccattcaca ccacatctat ggcaaccgga tgtacgacat gatcgggggg 7500 aatccctccg gttgtgtggc cacctccatc ctcaacacca tcatcaacaa catctgtgtc 7560 ctctctgccc tcatccaaca ccctgatttc tctccctccc gcttccacat cctggcgtac 7620 ggtgacgacg tcatctacgc tacggaaccc cccatccatc cttccttcct tcgggagttc 7680 taccagaaac acacccctct ggtggtcacc cccgcaaaca aaggccagga tttcccaccc 7740 acgtctacga tctatgaagt caccttcctc aaacgctggt tcgttccgga cgatgttaga 7800 cccatctaca ttcaccctgt gatggacccc gacacgtacg agcaatcggt aatgtggttg 7860 cgtgatggag atttccaaga tgtggtcacc tctctctgcc acctggcctt ccacagcgga 7920 cccaagacct acgctgcctg gtgcatgaaa gtgcgcgagc agtgcctcaa gtccgggttc 7980 gcccccaact tcctacccta ctcctacctc caactccgct ggctaaatct gctggctgcc 8040 tgatagttag ggaacacagt gcctcggcac gcttagttag ttagaaccct ttgcccactc 8100 ctccatggtg atataaagac cacccacttc cttcgggtga gcccctaagc catggttgta 8160 ctgcactatc atcctaagac ggtccttctt cggatcgcaa tctcaccctg gtgccgcgct 8220 tccttcggga actgcacccg cggaccaggg ccgtctttga acttttctaa ctgttcttac 8280 //