Welcome to ProServer v686

Core by Roger Pettett © Genome Research Ltd.

ProServer: A simple, extensible Perl DAS server.
Bioinformatics 2007; doi: 10.1093/bioinformatics/btl650; PMID: 17237073

This server is maintained by andy.jenkinson@ebi.ac.uk.

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SourceMapmasterDescriptionCapabilities
129s7ab22_clones_m38-129S7/AB2.2 BAC Library, mapped to the GRCm38 mouse assembly. The 129S7/AB2.2 mouse BAC library end-sequences have been mapped to the GRCm38 mouse assembly using SSAHA alignment of the reads.types/1.1; features/1.1; stylesheet/1.0
BAC_clones_m38-BAC Clones (RP23/24 libraries) DAS Source For GRCm38 C57BL/6J Mouse Assembly: End read sequences have been mapped to the GRCm38 Mouse assembly using SSAHA. types/1.1; features/1.1; stylesheet/1.0
batman_BC-DNA methylation landscape for B-cells, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_CD4-DNA methylation landscape for CD4 T-cells, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_CD8-DNA methylation landscape for CD8 T-cells, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_CN-DNA methylation landscape for Colon, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_CX-DNA methylation landscape for Cervix, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_GM-DNA methylation landscape for GM06990, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_LG-DNA methylation landscape for Lung, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_LR-DNA methylation landscape for Liver, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_PL-DNA methylation landscape for Placenta, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_PR-DNA methylation landscape for Prostate, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_PS-DNA methylation landscape for Pancreas, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_RM-DNA methylation landscape for Rectum, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_seq_SP-DNA methylation landscape for Sperm, assayed using methyl DNA immunoprecipitation (MeDIP), Illumina Genome Analyzer sequencing and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_SM-DNA methylation landscape for Skeletal Muscle, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_SP-DNA methylation landscape for Sperm, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_US-DNA methylation landscape for Uterus, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
batman_WB-DNA methylation landscape for Whole Blood, assayed using methyl DNA immunoprecipitation (MeDIP), a Nimblegen oligonucleotide array and Bayesian Tool for Methylation Analysis (Batman). A colour gradient indicates methylation level: dark blue indicates highly methylated areas, through green to yellow, which indicates low methylation.types/1.0; features/1.0; stylesheet/1.0
chori29_clones_m37-CHORI-29 NOD BAC Library, mapped to the NCBIM37 mouse assembly. The NOD/ShiLtJ mouse BAC library end-sequences have been mapped to the NCBIM37 mouse assembly using SSAHA alignment of the reads.types/1.0; features/1.0; stylesheet/1.0
chori29_clones_m38-CHORI-29 NOD BAC Library, mapped to the GRCm38 mouse assembly. The NOD/ShiLtJ mouse BAC library end-sequences have been mapped to the GRCm38 mouse assembly using SSAHA alignment of the reads.types/1.1; features/1.1; stylesheet/1.0
dil_clones_m38-DIL NOD BAC Library, mapped to the GRCm38 mouse assembly. The NOD/MrkTac mouse BAC library end-sequences have been mapped to the GRCm38 mouse assembly using SSAHA alignment of the reads.types/1.1; features/1.1; stylesheet/1.0
eqtl_rat_cis_fat-Expression Quantitative Trait Loci (cis) for Rattus norvegicustypes/1.0; features/1.0; stylesheet/1.0
eqtl_rat_cis_kidney-Expression Quantitative Trait Loci (cis) for Rattus norvegicustypes/1.0; features/1.0; stylesheet/1.0
eqtl_rat_trans_fat-Expression Quantitative Trait Loci (trans) for Rattus norvegicustypes/1.0; features/1.0; stylesheet/1.0
eqtl_rat_trans_kidney-Expression Quantitative Trait Loci (trans) for Rattus norvegicustypes/1.0; features/1.0; stylesheet/1.0
micer_clones_m38-MHPP/MHPN library end-sequences have been mapped to GRCm38 mouse assembly using SSAHA alignment of the reads.types/1.1; features/1.1; stylesheet/1.0
mouse_fosmids_m38-WIBR-1 mouse Fosmid end read sequences have been mapped to the GRCm38 Mouse assembly using SSAHA.types/1.1; features/1.1; stylesheet/1.0
MSM_clones_m38-MSM BAC Library, mapped to the GRCm38 mouse assembly. The MSM mouse BAC library end-sequences have been mapped to the GRCm38 mouse assembly using SSAHA alignment of the reads.types/1.1; features/1.1; stylesheet/1.0
nod_clones_m37-DIL NOD BAC Library, mapped to the NCBIM37 mouse assembly. The NOD/MrkTac mouse BAC library end-sequences have been mapped to the NCBIM37 mouse assembly using SSAHA alignment of the reads.types/1.0; features/1.0; stylesheet/1.0



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