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CHEBI:16964 - 5-hydroxymethyluracil

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ChEBI Name 5-hydroxymethyluracil
ChEBI ID CHEBI:16964
Definition A primary alcohol that is uracil bearing a hydroxymethyl substituent at the 5-position.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:43267, CHEBI:2079, CHEBI:12139, CHEBI:20591
Supplier Information
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Formula C5H6N2O3
Net Charge 0
Average Mass 142.11282
Monoisotopic Mass 142.038
InChI InChI=1S/C5H6N2O3/c8-2-3-1-6-5(10)7-4(3)9/h1,8H,2H2,(H2,6,7,9,10)
InChIKey JDBGXEHEIRGOBU-UHFFFAOYSA-N
SMILES OCc1c[nH]c(=O)[nH]c1=O
Roles Classification
Biological Role(s): human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing 5-hydroxymethyluracil (CHEBI:16964) has functional parent thymine (CHEBI:17821)
5-hydroxymethyluracil (CHEBI:16964) has functional parent uracil (CHEBI:17568)
5-hydroxymethyluracil (CHEBI:16964) has role human metabolite (CHEBI:77746)
5-hydroxymethyluracil (CHEBI:16964) is a primary alcohol (CHEBI:15734)
5-hydroxymethyluracil (CHEBI:16964) is a pyrimidone (CHEBI:38337)
Incoming (β-D-glucopyranosyloxymethyl)deoxyuridine (CHEBI:111513) has functional parent 5-hydroxymethyluracil (CHEBI:16964)
(β-D-glucopyranosyloxymethyl)deoxyuridine 5'-monophosphate (CHEBI:111511) has functional parent 5-hydroxymethyluracil (CHEBI:16964)
5-formyluracil (CHEBI:80961) has functional parent 5-hydroxymethyluracil (CHEBI:16964)
IUPAC Name
5-(hydroxymethyl)pyrimidine-2,4(1H,3H)-dione
Synonyms Sources
5-(hydroxymethyl)-2,4(1H,3H)-pyrimidinedione ChemIDplus
5-(hydroxymethyl)uracil ChemIDplus
5-HYDROXYMETHYL URACIL PDBeChem
5-Hydroxymethyluracil KEGG COMPOUND
5-hydroxymethyluracil UniProt
Database Links Databases
C03088 KEGG COMPOUND
CPD-254 MetaCyc
HMDB00469 HMDB
HMU PDBeChem
View more database links
Registry Numbers Types Sources
125482 Beilstein Registry Number Beilstein
125482 Reaxys Registry Number Reaxys
4433-40-3 CAS Registry Number KEGG COMPOUND
4433-40-3 CAS Registry Number ChemIDplus
Citations Waiting for Citations Types Sources
11275423 PubMed citation Europe PMC
12361800 PubMed citation Europe PMC
15649624 PubMed citation Europe PMC
1807452 PubMed citation Europe PMC
3904829 PubMed citation Europe PMC
9639392 PubMed citation Europe PMC
9671541 PubMed citation Europe PMC
Last Modified
27 March 2016