CHEBI:17407 - 2-trans,6-trans-farnesyl diphosphate

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name 2-trans,6-trans-farnesyl diphosphate
ChEBI ID CHEBI:17407
ChEBI ASCII Name 2-trans,6-trans-farnesyl diphosphate
Definition The trans,trans-stereoisomer of farnesyl diphosphate.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:12874, CHEBI:11491, CHEBI:42496, CHEBI:10700, CHEBI:11488, CHEBI:12854, CHEBI:19789
Supplier Information
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Formula C15H28O7P2
Net Charge 0
Average Mass 382.32610
Monoisotopic Mass 382.13103
InChI InChI=1S/C15H28O7P2/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-21-24(19,20)22-23(16,17)18/h7,9,11H,5-6,8,10,12H2,1-4H3,(H,19,20)(H2,16,17,18)/b14-9+,15-11+
InChIKey VWFJDQUYCIWHTN-YFVJMOTDSA-N
SMILES CC(C)=CCC\C(C)=C\CC\C(C)=C\COP(O)(=O)OP(O)(O)=O
Metabolite of Species Details
Mus musculus (NCBI:txid10090) Source: BioModels - MODEL1507180067 See: PubMed
Escherichia coli (NCBI:txid562) See: PubMed
Roles Classification
Biological Role(s): Escherichia coli metabolite
Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing 2-trans,6-trans-farnesyl diphosphate (CHEBI:17407) has role Escherichia coli metabolite (CHEBI:76971)
2-trans,6-trans-farnesyl diphosphate (CHEBI:17407) has role mouse metabolite (CHEBI:75771)
2-trans,6-trans-farnesyl diphosphate (CHEBI:17407) is a farnesyl diphosphate (CHEBI:50277)
2-trans,6-trans-farnesyl diphosphate (CHEBI:17407) is conjugate acid of 2-trans,6-trans-farnesyl diphosphate(3−) (CHEBI:175763)
Incoming (2E,6E,10E)-ω-hydroxyfarnesyl diphosphate (CHEBI:84985) has functional parent 2-trans,6-trans-farnesyl diphosphate (CHEBI:17407)
2-trans,6-trans-farnesyl diphosphate(3−) (CHEBI:175763) is conjugate base of 2-trans,6-trans-farnesyl diphosphate (CHEBI:17407)
IUPAC Name
(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate
Synonyms Sources
(2E,6E)-farnesol diphosphate ChEBI
(2E,6E)-farnesyl diphosphate ChemIDplus
(2E,6E)-Farnesyl diphosphate KEGG COMPOUND
(2E,6E)-farnesyl pyrophosphate ChemIDplus
(all-E)-farnesyl diphosphate ChemIDplus
(E,E)-farnesyl pyrophosphate ChemIDplus
2-trans,6-trans-farnesyl diphosphate ChEBI
2-trans,6-trans-Farnesyl diphosphate KEGG COMPOUND
2-trans,6-trans-farnesyl pyrophosphate ChemIDplus
all-trans-farnesyl pyrophosphate ChemIDplus
Farnesyl diphosphate KEGG COMPOUND
FARNESYL DIPHOSPHATE PDBeChem
Farnesyl pyrophosphate KEGG COMPOUND
trans,trans-farnesyl diphosphate ChEBI
trans,trans-Farnesyl diphosphate KEGG COMPOUND
trans,trans-farnesyl diphosphate ChemIDplus
trans-trans-farnesyl diphosphate ChEBI
Manual Xrefs Databases
C00000907 KNApSAcK
C00007268 KNApSAcK
C00448 KEGG COMPOUND
FPP PDBeChem
LMPR0103010002 LIPID MAPS
View more database links
Registry Numbers Types Sources
13058-04-3 CAS Registry Number KEGG COMPOUND
2482197 Beilstein Registry Number Beilstein
2482197 Reaxys Registry Number Reaxys
372-97-4 CAS Registry Number ChemIDplus
Citation Waiting for Citations Type Source
7753173 PubMed citation Europe PMC
Last Modified
26 October 2016
General Comment
2004-05-25 The prevalent isomer in Nature is the trans,trans isomer and the unqualified term 'farnesyl' is generally used to mean this isomer unless otherwise specified.