CHEBI:15698 - 2'-deoxycytidine

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name 2'-deoxycytidine
ChEBI ID CHEBI:15698
Definition A pyrimidine 2'-deoxyribonucleoside having cytosine as the nucleobase.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:4407, CHEBI:41806, CHEBI:41417, CHEBI:41430, CHEBI:41434, CHEBI:19240
Supplier Information
Download Molfile XML SDF
Wikipedia License
Waiting for wikipedia content
Read full article at Wikipedia
Formula C9H13N3O4
Net Charge 0
Average Mass 227.21720
Monoisotopic Mass 227.091
InChI InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1
InChIKey CKTSBUTUHBMZGZ-SHYZEUOFSA-N
SMILES Nc1ccn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1
Metabolite of Species Details
Mus musculus (NCBI:10090) Source: BioModels - MODEL1507180067 See: PubMed
Saccharomyces cerevisiae (NCBI:4932) Source: yeast.sf.net See: PubMed
Escherichia coli (NCBI:562) See: PubMed
Homo sapiens (NCBI:9606) See: DOI
Roles Classification
Biological Role(s): mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae ).
Escherichia coli metabolite
Any bacterial metabolite produced during a metabolic reaction in Escherichia coli.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing 2'-deoxycytidine (CHEBI:15698) has functional parent cytosine (CHEBI:16040)
2'-deoxycytidine (CHEBI:15698) has role Escherichia coli metabolite (CHEBI:76971)
2'-deoxycytidine (CHEBI:15698) has role Saccharomyces cerevisiae metabolite (CHEBI:75772)
2'-deoxycytidine (CHEBI:15698) has role human metabolite (CHEBI:77746)
2'-deoxycytidine (CHEBI:15698) has role mouse metabolite (CHEBI:75771)
2'-deoxycytidine (CHEBI:15698) is a pyrimidine 2'-deoxyribonucleoside (CHEBI:19255)
Incoming 5-methyl-2'-deoxycytidine (CHEBI:47876) is a 2'-deoxycytidine (CHEBI:15698)
IUPAC Name
2'-deoxycytidine
Synonyms Sources
2'-DEOXYCYTIDINE PDBeChem
2'-Deoxycytidine KEGG COMPOUND
2'-deoxycytidine UniProt
4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-one IUPAC
dC ChEBI
dCYD ChemIDplus
Deoxycytidine KEGG COMPOUND
Database Links Databases
C00881 KEGG COMPOUND
DB02594 DrugBank
DCZ PDBeChem
Deoxycytidine Wikipedia
DEOXYCYTIDINE MetaCyc
HMDB0000014 HMDB
View more database links
Registry Numbers Types Sources
1321747 Gmelin Registry Number Gmelin
87567 Beilstein Registry Number Beilstein
87567 Reaxys Registry Number Reaxys
951-77-9 CAS Registry Number KEGG COMPOUND
951-77-9 CAS Registry Number NIST Chemistry WebBook
951-77-9 CAS Registry Number ChemIDplus
Citation Waiting for Citations Type Source
15778433 PubMed citation Europe PMC
Last Modified
27 January 2016