tetramethylrhodamine thiocyanate (CHEBI:52336)

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ChEBI Name	tetramethylrhodamine thiocyanate

ChEBI ID	CHEBI:52336

Stars	This entity has been manually annotated by the ChEBI Team.

Supplier Information

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Formula

C25H22ClN3O3S

Net Charge

Average Mass

479.97800

Monoisotopic Mass

479.10704

InChI

InChI=1S/C25H21N3O3S.ClH/c1-27(2)15-5-8-19-22(11-15)31-23-12-16(28(3)4)6-9-20(23)24(19)18-10-7-17(32-14-26)13-21(18)25(29)30;/h5-13H,1-4H3;1H

InChIKey

JGVWCANSWKRBCS-UHFFFAOYSA-N

SMILES

[Cl-].CN(C)c1ccc2c(-c3ccc(SC#N)cc3C(O)=O)c3ccc(cc3[o+]c2c1)N(C)C

Roles Classification
Application(s):	fluorochrome A fluorescent dye used to stain biological specimens.

ChEBI Ontology
Outgoing	tetramethylrhodamine thiocyanate (CHEBI:52336) has functional parent rhodamine 110 (CHEBI:52315) tetramethylrhodamine thiocyanate (CHEBI:52336) has part tetramethylrhodamine thiocyanate cation (CHEBI:52933) tetramethylrhodamine thiocyanate (CHEBI:52336) has role fluorochrome (CHEBI:51217) tetramethylrhodamine thiocyanate (CHEBI:52336) is a organic chloride salt (CHEBI:36094)

IUPAC Name

9-(2-carboxy-4-thiocyanatophenyl)-3,6-bis(dimethylamino)xanthenium chloride

Synonyms	Sources
Rhodamine tetramethylisothiocyanate	ChemIDplus
TRITC	ChemIDplus

Registry Number	Type	Source
4158-89-8	CAS Registry Number	ChemIDplus

Last Modified

06 August 2009