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ChEBI
> Main
CHEBI:32096 - rhodomycin D
Main
ChEBI Ontology
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ChEBI Name
rhodomycin D
ChEBI ID
CHEBI:32096
Definition
An anthracycline that is aklavinone having a 3-amino-2,3,6-trideoxy-α-
L
-
lyxo
-hexopyranosyl residue attached at position 4 via a glycosidic linkage.
Stars
This entity has been manually annotated by the ChEBI Team.
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Formula
C28H31NO11
Net Charge
0
Average Mass
557.54580
Monoisotopic Mass
557.18971
InChI
InChI=1S/C28H31NO11/c1-
4-
28(37)
9-
14(40-
15-
8-
12(29)
22(31)
10(2)
39-
15)
17-
18(21(28)
27(36)
38-
3)
26(35)
19-
20(25(17)
34)
24(33)
16-
11(23(19)
32)
6-
5-
7-
13(16)
30/h5-
7,10,12,14-
15,21-
22,30-
31,34-
35,37H,4,8-
9,29H2,1-
3H3/t10-
,12-
,14-
,15-
,21-
,22+,28+/m0/s1
InChIKey
CADJZGPRUYOSGU-QWWLYEKJSA-N
SMILES
CC[C@@]
1(O)
C[C@H]
(O[C@H]
2C[C@H]
(N)
[C@H]
(O)
[C@H]
(C)
O2)
c2c(O)
c3C(=O)
c4c(O)
cccc4C(=O)
c3c(O)
c2[C@H]
1C(=O)
OC
Roles Classification
Biological Role
(s):
metabolite
Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites.
(via
anthracycline
)
antimicrobial agent
A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
(via
anthracycline antibiotic
)
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
rhodomycin D (
CHEBI:32096
)
has functional parent
aklavinone (
CHEBI:31181
)
rhodomycin D (
CHEBI:32096
)
has role
metabolite (
CHEBI:25212
)
rhodomycin D (
CHEBI:32096
)
is a
p
-quinones (
CHEBI:25830
)
rhodomycin D (
CHEBI:32096
)
is a
aminoglycoside (
CHEBI:47779
)
rhodomycin D (
CHEBI:32096
)
is a
anthracycline antibiotic (
CHEBI:49322
)
rhodomycin D (
CHEBI:32096
)
is a
deoxy hexoside (
CHEBI:35315
)
rhodomycin D (
CHEBI:32096
)
is a
methyl ester (
CHEBI:25248
)
rhodomycin D (
CHEBI:32096
)
is a
monosaccharide derivative (
CHEBI:63367
)
rhodomycin D (
CHEBI:32096
)
is a
tetracenequinones (
CHEBI:51286
)
rhodomycin D (
CHEBI:32096
)
is conjugate base of
rhodomycin D(1+) (
CHEBI:77073
)
Incoming
rhodomycin D(1+) (
CHEBI:77073
)
is conjugate acid of
rhodomycin D (
CHEBI:32096
)
IUPAC Name
methyl (1
R
,2
R
,4
S
)-
4-
[(3-
amino-
2,3,6-
trideoxy-
α-
L
-
lyxo
-
hexopyranosyl)oxy]-
2-
ethyl-
2,5,7,12-
tetrahydroxy-
6,11-
dioxo-
1,2,3,4,6,11-
hexahydrotetracene-
1-
carboxylate
Synonyms
Sources
1-Hydroxy-10-methoxycarbonyl-13-deoxocarminomycin
ChemIDplus
7-O-(3-Amino-2,3,6-trideoxy-alpha-hexopyranosyl)-epsilon-isorhodomycinone
ChemIDplus
Rhodomycin D
KEGG COMPOUND
rhodomycinone D
MetaCyc
Manual Xrefs
Databases
C12426
KEGG COMPOUND
CPD-15730
MetaCyc
KR20090092481
Patent
View more database links
Registry Numbers
Types
Sources
117016-15-6
CAS Registry Number
ChemIDplus
4222916
Reaxys Registry Number
Reaxys
Citations
Types
Sources
10631513
PubMed citation
Europe PMC
1473988
PubMed citation
Europe PMC
16545946
PubMed citation
Europe PMC
9098063
PubMed citation
Europe PMC
Last Modified
06 June 2016