CHEBI:61288 - 5-hydroxymethyl-2'-deoxyuridine

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name 5-hydroxymethyl-2'-deoxyuridine
ChEBI ID CHEBI:61288
Definition A pyrimidine 2'-deoxyribonucleoside composed of 2'-deoxyuridine having a 5-hydroxymethyl substituent.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Formula C10H14N2O6
Net Charge 0
Average Mass 258.22800
Monoisotopic Mass 258.08519
InChI InChI=1S/C10H14N2O6/c13-3-5-2-12(10(17)11-9(5)16)8-1-6(15)7(4-14)18-8/h2,6-8,13-15H,1,3-4H2,(H,11,16,17)/t6-,7+,8+/m0/s1
InChIKey IPAVKOYJGUMINP-XLPZGREQSA-N
SMILES OC[C@H]1O[C@H](C[C@@H]1O)n1cc(CO)c(=O)[nH]c1=O
ChEBI Ontology
Outgoing 5-hydroxymethyl-2'-deoxyuridine (CHEBI:61288) has functional parent 5-hydroxymethyluracil (CHEBI:16964)
5-hydroxymethyl-2'-deoxyuridine (CHEBI:61288) is a pyrimidine 2'-deoxyribonucleoside (CHEBI:19255)
Incoming 5-(2-aminoethoxy)methyl-2'-deoxyuridine (CHEBI:142164) has functional parent 5-hydroxymethyl-2'-deoxyuridine (CHEBI:61288)
IUPAC Name
2'-deoxy-5-(hydroxymethyl)uridine
Synonyms Sources
1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)-tetrahydrofuran-2-yl)-5-(2-hydroxymethyl)pyrimidine-2,4(1H,3H)-dione ChEBI
5-HMdU ChEBI
α-Hydroxy-thymidin ChEBI
alpha-hydroxythymidine ChemIDplus
HMdU ChEBI
Registry Numbers Types Sources
31615 Reaxys Registry Number Reaxys
5116-24-5 CAS Registry Number ChemIDplus
Citation Waiting for Citations Type Source
8349138 PubMed citation Europe PMC
Last Modified
11 January 2019