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ChEBI
> Main
CHEBI:52713 - CellTracker red CMTPX 5-isomer
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ChEBI Name
CellTracker red CMTPX 5-isomer
ChEBI ID
CHEBI:52713
Definition
The 5-isomer of a fluorescent dye with an emission wavelength of 602 nm, derived from a heteropentacyclic ring system.
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This entity has been manually annotated by the ChEBI Team.
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Formula
C42H40ClN3O4
Net Charge
0
Average Mass
686.23800
Monoisotopic Mass
685.27073
InChI
InChI=1S/C42H40ClN3O4/c1-
23-
20-
41(3,4)
45(7)
34-
18-
36-
32(16-
29(23)
34)
38(33-
17-
30-
24(2)
21-
42(5,6)
46(8)
35(30)
19-
37(33)
50-
36)
28-
14-
13-
27(15-
31(28)
40(48)
49)
44-
39(47)
26-
11-
9-
25(22-
43)
10-
12-
26/h9-
21H,22H2,1-
8H3,(H,48,49)
InChIKey
SRYMYEOAINPJDB-UHFFFAOYSA-N
SMILES
CN1c2cc3Oc4cc5=[N+](C)C(C)(C)C=C(C)c5cc4=C(c3cc2C(C)=CC1(C)C)c1ccc(NC(=O)c2ccc(CCl)cc2)cc1C([O-])=O
Roles Classification
Application
(s):
fluorochrome
A fluorescent dye used to stain biological specimens.
(via
CellTracker red CMTPX
)
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
CellTracker red CMTPX 5-isomer (
CHEBI:52713
)
has role
fluorochrome (
CHEBI:51217
)
CellTracker red CMTPX 5-isomer (
CHEBI:52713
)
is a
CellTracker red CMTPX (
CHEBI:52711
)
IUPAC Name
5-
({[4-
(chloromethyl)phenyl]carbonyl}amino)-
2-
(1,2,2,4,8,10,10,11-
octamethyl-
10,11-
dihydro-
2
H
-
pyrano[3,2-
g
:5,6-
g
']diquinolin-
1-
ium-
6-
yl)benzoate
Last Modified
09 July 2009