CHEBI:52892 - rhod-2(1+)

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ChEBI Name rhod-2(1+)
ChEBI ID CHEBI:52892
Definition A cationic fluorescent dye derived from 9-phenylxanthene.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Formula C52H59N4O19
Net Charge +1
Average Mass 1044.04030
Monoisotopic Mass 1043.37680
InChI InChI=1S/C52H59N4O19/c1-32-10-16-42(55(24-48(61)71-28-67-33(2)57)25-49(62)72-29-68-34(3)58)46(20-32)65-18-19-66-47-21-37(11-17-43(47)56(26-50(63)73-30-69-35(4)59)27-51(64)74-31-70-36(5)60)52-40-14-12-38(53(6)7)22-44(40)75-45-23-39(54(8)9)13-15-41(45)52/h10-17,20-23H,18-19,24-31H2,1-9H3/q+1
InChIKey WVFBOQGCAKHVGN-UHFFFAOYSA-N
SMILES CN(C)c1ccc2c(-c3ccc(N(CC(=O)OCOC(C)=O)CC(=O)OCOC(C)=O)c(OCCOc4cc(C)ccc4N(CC(=O)OCOC(C)=O)CC(=O)OCOC(C)=O)c3)c3ccc(cc3oc2c1)=[N+](C)C
Roles Classification
Application(s): fluorochrome
A fluorescent dye used to stain biological specimens.
dye

(via xanthene dye )
View more via ChEBI Ontology
ChEBI Ontology
Outgoing rhod-2(1+) (CHEBI:52892) has role fluorochrome (CHEBI:51217)
rhod-2(1+) (CHEBI:52892) is a iminium ion (CHEBI:35286)
rhod-2(1+) (CHEBI:52892) is a xanthene dye (CHEBI:37929)
Incoming rhod-2 dye (CHEBI:52260) has part rhod-2(1+) (CHEBI:52892)
IUPAC Name
N-[9-(4-{bis[2-(acetoxymethoxy)-2-oxoethyl]amino}-3-[2-(2-{bis[2-(acetoxymethoxy)-2-oxoethyl]amino}-5-methylphenoxy)ethoxy]phenyl)-6-(dimethylamino)-3H-xanthen-3-ylidene]-N-methylmethanaminium
Synonym Source
rhod-2 cation ChEBI
Last Modified
31 July 2009