CHEBI:52886 - Po-Pro-3(2+)

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ChEBI Name Po-Pro-3(2+)
ChEBI ID CHEBI:52886
Definition An unsymmetrical C3 cyanine dye having 1,3-benzoxazol-2-yl and pyridinium-4-yl substituents at each end.
Stars This entity has been manually annotated by the ChEBI Team.
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Formula C22H29N3O
Net Charge +2
Average Mass 351.48520
Monoisotopic Mass 351.22997
InChI InChI=1S/C22H29N3O/c1-23-20-10-5-6-11-21(20)26-22(23)12-7-9-19-13-16-24(17-14-19)15-8-18-25(2,3)4/h5-7,9-14,16-17H,8,15,18H2,1-4H3/q+2
InChIKey IRNFZNDMEONWJL-UHFFFAOYSA-N
SMILES [H]C(=C([H])c1oc2ccccc2[n+]1C)C([H])=C1C=CN(CCC[N+](C)(C)C)C=C1
Roles Classification
Application(s): fluorochrome
A fluorescent dye used to stain biological specimens.
dye

(via cyanine dye )
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ChEBI Ontology
Outgoing Po-Pro-3(2+) (CHEBI:52886) has role fluorochrome (CHEBI:51217)
Po-Pro-3(2+) (CHEBI:52886) is a benzoxazolium ion (CHEBI:52841)
Po-Pro-3(2+) (CHEBI:52886) is a cyanine dye (CHEBI:37960)
Po-Pro-3(2+) (CHEBI:52886) is a pyridinium ion (CHEBI:50334)
Po-Pro-3(2+) (CHEBI:52886) is a quaternary ammonium ion (CHEBI:35267)
Incoming Po-Pro-3 (CHEBI:52238) has part Po-Pro-3(2+) (CHEBI:52886)
IUPAC Names
3-methyl-2-(3-{1-[3-(trimethylammonio)propyl]pyridin-4(1H)-ylidene}prop-1-en-1-yl)-1,3-benzoxazol-3-ium
4-[3-(3-methyl-1,3-benzoxazol-2(3H)-ylidene)prop-1-en-1-yl]-1-[3-(trimethylammonio)propyl]pyridinium
Synonym Source
Po-Pro-3 cation ChEBI
Last Modified
31 July 2009