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vancomycin (CHEBI:28001)

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ChEBI Name vancomycin
ChEBI ID CHEBI:28001
Definition A complex glycopeptide from Streptomyces orientalis. It inhibits a specific step in the synthesis of the peptidoglycan layer in the Gram-positive bacteria Staphylococcus aureus and Clostridium difficile.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:49941, CHEBI:9931, CHEBI:27276
Supplier Information
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Formula Source
C66H75Cl2N9O24 KEGG COMPOUND
Net Charge 0
Average Mass 1449.25336
InChI
InChI=1S/C66H75Cl2N9O24/c1-23(2)12-34(71-5)58(88)76-49-51(83)26-7-10-38(32(67)14-26)97-40-16-28-17-41(55(40)101-65-56(54(86)53(85)42(22-78)99-65)100-44-21-66(4,70)57(87)24(3)96-44)98-39-11-8-27(15-33(39)68)52(84)50-63(93)75-48(64(94)95)31-18-29(79)19-37(81)45(31)30-13-25(6-9-36(30)80)46(60(90)77-50)74-61(91)47(28)73-59(89)35(20-43(69)82)72-62(49)92/h6-11,13-19,23-24,34-35,42,44,46-54,56-57,65,71,78-81,83-87H,12,20-22,70H2,1-5H3,(H2,69,82)(H,72,92)(H,73,89)(H,74,91)(H,75,93)(H,76,88)(H,77,90)(H,94,95)/t24-,34+,35-,42+,44-,46+,47+,48-,49+,50-,51+,52+,53+,54-,56+,57+,65-,66-/m0/s1
InChIKey
MYPYJXKWCTUITO-LYRMYLQWSA-N
SMILES
CN[C@H](CC(C)C)C(=O)N[C@@H]1[C@H](O)c2ccc(Oc3cc4cc(Oc5ccc(cc5Cl)[C@@H](O)[C@@H]5NC(=O)[C@H](NC(=O)[C@@H]4NC(=O)[C@H](CC(N)=O)NC1=O)c1ccc(O)c(c1)-c1c(O)cc(O)cc1[C@H](NC5=O)C(O)=O)c3O[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O[C@H]1C[C@](C)(N)[C@H](O)[C@H](C)O1)c(Cl)c2
Roles Classification
Biological Role(s): antibacterial drug
A drug used to treat or prevent bacterial infections.
antibiotic
A substance that is biostatic or biocidal at low concentrations towards bacteria, yeasts, moulds, or other form of life, especially pathogenic or noxious organisms. Although the term was originally restricted to substances produced by microorganisms, its use was later expanded to include derivatives of such substances and it is now commonly used to include entirely synthetic compounds.
(via peptide antibiotic )
Application(s): antibacterial drug
A drug used to treat or prevent bacterial infections.
antibiotic
A substance that is biostatic or biocidal at low concentrations towards bacteria, yeasts, moulds, or other form of life, especially pathogenic or noxious organisms. Although the term was originally restricted to substances produced by microorganisms, its use was later expanded to include derivatives of such substances and it is now commonly used to include entirely synthetic compounds.
(via peptide antibiotic )
View more on the ChEBI Ontology
ChEBI Ontology
Outgoing vancomycin (CHEBI:28001) has functional parent vancomycin aglycone (CHEBI:47724)
vancomycin (CHEBI:28001) has role antibacterial drug (CHEBI:36047)
vancomycin (CHEBI:28001) has role antibiotic (CHEBI:22582)
vancomycin (CHEBI:28001) is a glycopeptide antibiotic (CHEBI:24395)
vancomycin (CHEBI:28001) is conjugate base of vancomycin(1+) (CHEBI:76842)
Incoming telavancin (CHEBI:71229) has functional parent vancomycin (CHEBI:28001)
vancomycin(1+) (CHEBI:76842) is conjugate acid of vancomycin (CHEBI:28001)
IUPAC Name
(3S,6R,7R,11R,23S,26S,30aS,36R,38aR)-44-[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-α-L-lyxo-hexopyranosyl)-β-D-glucopyranosyloxy]-3-(carbamoylmethyl)-10,19-dichloro-2,3,4,5,6,7,23,25,26,36,37,38,38a-tetradecahydro-7,22,28,30,32-pentahydroxy-6-(N-methyl-D-leucyl)-2,5,24,38,39-pentaoxo-1H,22H-23,36-(epiminomethano)-8,11:18,21-dietheno-13,16:31,35-di(metheno)[1,6,9]oxadiazacyclohexadecino[4,5-m][10,2,16]benzoxadiazacyclotetracosine-26-carboxylic acid
INNs Sources
vancomicina ChemIDplus
vancomycin ChemIDplus
vancomycine ChemIDplus
vancomycinum ChemIDplus
Synonyms Sources
(1S,2R,18R,22S,25R,28R,40S)-22-(2-amino-2-oxoethyl)-48-[2-O-(3-amino-2,3,6-trideoxy-3-methyl-α-L-lyxo-hexopyranosyl)-β-D-glucopyranosyloxy]-5,15-dichloro-2,18,32,35,37-pentahydroxy-19-[(N-methyl-D-leucyl)amino]-20,23,26,42,44-pentaoxo-7,13-dioxa-21,24,27,41,43-pentaazaoctacyclo[26.14.2.23,6.214,17.18,12.129,33.010,25.034,39]pentaconta-3,5,8(48),9,11,14,16,29(45),30,32,34,36,38,46,49-pentadecaene-40-carboxylic acid ChEBI
(2.2Sp,3.5Sa,2.6Sp)-O4.2,C3.4:C5.4,O4.6:C3.5,C2.7-tricyclo[N-methyl-D-leucyl-3-chloro-(R)-β-hydroxy-D-tyrosyl-L-asparaginyl-D-2-(4-{[2-O-(3-amino-2,3,6-trideoxy-3-C-methyl-α-L-lyxo-hexopyranosyl)-β-D-glucopyranosyl]oxy}phenyl)glycyl-D-2-(4-hydroxyphenyl)glycyl-3-chloro-(R)-β-hydroxy-L-tyrosyl-L-2-(3,5-dihydroxyphenyl)glycine] JCBN
Vancomycin KEGG COMPOUND
VANCOMYCIN PDBeChem
Brand Name Source
Vancocin KEGG DRUG
Database Links Databases
C00016052 KNApSAcK
C06689 KEGG COMPOUND
CPD-12245 MetaCyc
D00212 KEGG DRUG
DB00512 DrugBank
US3067099 Patent
VAN PDBeChem
Vancomycin Wikipedia
View more database links
Registry Numbers Types Sources
1404-90-6 CAS Registry Number KEGG COMPOUND
1404-90-6 CAS Registry Number ChemIDplus
3132 Beilstein Registry Number Beilstein
3132 Reaxys Registry Number Reaxys
Citations Waiting for Citations Types Sources
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Last Modified
04 août 2014

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