ESTDAB Cell Profile for ESTDAB-065 (unknown)


Cell Source

Cell Type: MelanomaTissue of Origin: Unknown
Ethnic Origin: UnknownGender: Unknown
Medium Used: RPMI 1640, 10% FBSMorphology: Unknown
Mycoplasma: -  
Comments: previously misidentified as UKRV-Mel-7, same DNA-profile as UKRV-Mel-5 (ESTDAB-145) and ESTDAB-062, -131, -175, -185, -186 new cells from submittor have been obtained (ESTDAB-131) that have the sameDNA-profile but the HLA-typing does not match the one supplied by submittor

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Primary Search Determinants

High Resolution HLA Typing

High Resolution HLA Typing

High Resolution Typing of HLA and Related Genes (Help on HLA High Resolution Typing)
HLA-A2402/09N/11N
HLA-B4002/03
HLA-C0304
HLA-DRB1150201
HLA-DRB3ND
HLA-DRB4ND
HLA-DRB5ND
HLA-DQA1ND
HLA-DQB10601, ?
HLA-DPA1ND
HLA-DPB10901

HLA and Related Genes, Surface Expression

HLA and Related Genes, Surface Expression

FACS Data (Help on FACS Data)
Marker Initial After 48hrs IFN-Gamma Induced
Normalised Score Intensity Normalised Score Intensity
HLA-A+87ND0
HLA-A,B,C++49.51ND0
HLA-B+47++103
HLA-Bw4-1-0
HLA-Bw6+47++172
HLA-CND0ND0
HLA-DP-0+29
HLA-DQ-0+56
HLA-DR-1.01ND0
HLA-END0ND0
HLA-G-0-0
MICAND0ND0
MICA/BND0ND0
MICBND0ND0
B2mND0ND0

Tumour Assosciated Antigens

Tumour Assosciated Antigens

Tumour Assosciated Antigens (Help on Tumour Assosciated Antigens)
Marker Score Marker Score
BAGE-MAGE 6 
BUC1NDMart 1 
GAGE+MMP2 ND 
gp100+MTA-1 ND 
MAGE 1+MUC-1 +++ 
MAGE 10-NA17-A ND 
MAGE 12+NY ESO 
MAGE 2-SURVIVIN ++ 
MAGE 3++T128 ND 
MAGE 4++T17 ND 
MAGE 6+T21 ND 
Mart 1+TACC1D ND 
MMP2NDTRAG 3 
MTA-1NDTRP 1 
Chromium Release Assay (Help on Chromium Release Assay)
Marker Specificity Ratio Lysis (%)
gp100 (154-162)   
gp100 (209-217)   
Mart1 (27-25)   
Immunohistochemistry (Help on Immunohistochemistry)
Marker Score  
gp100 

Cytokine Secretions

Cytokine Secretions

Cytokine Secretion Data (Help on Cytokine Secretions)
Marker Substrate - Plastic Marker Substrate - Matrigel
Interferon Gamma  Interferon Gamma  
Interleukin 10  Interleukin 10  
Interleukin 6  Interleukin 6  
Interleukin 8  Interleukin 8  
TGF Beta  TGF Beta  
TNF Alpha   TNF Alpha  

Secondary Search Determinants

Antigen Processing

Antigen Processing

Western Blot Data (Help on Western Blot Data)
Marker Initial After 72hrs IFN-Gamma Induced
Heavy ChainNDND
LMP2NDND
LMP7NDND
MECL1NDND
TAP1NDND
TAP2NDND

Apoptosis

Apoptosis

FACS Data (Help on FACS Data)
Marker Initial After 48hrs IFN-Gamma Induced
Normalised Score Intensity Normalised Score Intensity
B7H1-1,13ND0
CD95+4.02ND0
CD95L-1.15ND0
PD-1-1.02ND0
TRAIL-R1+2.75ND0
TRAIL-R2+2.07ND0
TRAIL-R3-1.23ND0
TRAIL-R4-1.10ND0
RNA Protection Assay Data (Help on RNA Protection Assay)
Marker Score Marker Score
caspase-8NDRIPND
cIAP1NDTNFRp55ND
cIAP2NDTRADDND
DR3 TRAMP APO3NDTRAF1ND
FADDNDTRAF2ND
FAFNDTRAF3ND
FAPNDTRAF4ND
FasNDTRAILND
FasLNDTRPM2ND
NAIPNDXIAPND
Western Blot Data (Help on Western Blot Data)
Marker Score Marker Score
APAF1NDBcl xLND
BAXNDBcl xSND
Bcl 2NDBidND
Bcl wNDFLIPND

Cytokine Polymorphisms

Cytokine Polymorphisms

Cytokine Polymorphism Data (Help on Cytokine Polymorphisms)
Marker Position Polymorphism Polymorphism
Interferon Gamma-333
Interferon Gamma874
Interleukin 10-1082
Interleukin 10-819
Interleukin 10-592
Interleukin 10571  
Interleukin 6-174
TGF Beta-988
TGF Beta-800
TGF Beta-509  
TGF Betacodon 10
TGF Betacodon 25
TGF Beta652  
TGF Beta653  
TGF Beta713  
TGF Beta788  
TGF Beta869
TGF Beta915
TNF Alpha-1031
TNF Alpha-863
TNF Alpha-857
TNF Alpha-851
TNF Alpha-574
TNF Alpha-376
TNF Alpha-308
TNF Alpha-238
TNF Alpha488

DNA Profile

DNA Profile

DNA Profile (Help on DNA Profiles)
Marker Score Marker Score
AmelogeninXD7S820 10 
CSF1PO12FGA 21 
D13S31711THO1 
D3S135816, 17 TPOX 
D5S8189vWA 14, 17 

Extra Cellular Matrix

Extra Cellular Matrix

Cell Adhesion (Help on Cell Adhesion)
Marker Score Marker Score
CollagenNDLaminin ND 
FibronectinND  
Glycosyltransferases (Help on Glycosyltransferases)
Marker Score Marker Score
FUT1NDSIAT3 ND 
FUT4NDSIAT4C ND 
MGAT5ND  
Lectins (Help on Lectins)
Mol. Weight (KDa) DSA GNA LTA NAA PHA-L SBA SNA
<30 ND ND ND ND ND ND
31-40 ND ND ND ND ND ND
41-50 ND ND ND ND ND ND
51-60 ND ND ND ND ND ND
61-70 ND ND ND ND ND ND
71-80 ND ND ND ND ND ND
81-90 ND ND ND ND ND ND
91-100 ND ND ND ND ND ND
101-110 ND ND ND ND ND ND
111-120 ND ND ND ND ND ND
121-130 ND ND ND ND ND ND
131-140 ND ND ND ND ND ND
141-150 ND ND ND ND ND ND
151-160 ND ND ND ND ND ND
161-170 ND ND ND ND ND ND
171-180 ND ND ND ND ND ND
181-190 ND ND ND ND ND ND
191-200 ND ND ND ND ND ND
>200 ND ND ND ND ND ND

Surface Markers

Surface Markers

FACS Data (Help on FACS Data)
Marker Initial After 48hrs IFN-Gamma Induced
Normalised Score Intensity Normalised Score Intensity
CD112ND0ND0
CD11aND0ND0
CD11bND0ND0
CD155ND0ND0
CD40-1.03ND0
CD44++24.71ND0
CD48ND0ND0
CD49dND0ND0
CD54++36.14ND0
CD56ND0ND0
CD57ND0ND0
CD58++14.19ND0
CD80-1.25ND0
CD86-1.09ND0
CD95+4.02ND0
CD95L-1.15ND0
ULBP1ND0ND0
ULBP2ND0ND0
ULBP3ND0ND0
gp100ND0ND0
Immunohistochemistry (Help on Immunohistochemistry)
Marker Score Marker Score
P-Cadherin ND 
K-CadherinNDVE-Cadherin ND 
N-CadherinND  
gp100-Survivin 

(Epi)Genetic Analysis

(Epi)Genetic Analysis

(Epi)Genetic Analysis (Help on (Epi)Genetic Analysis)
Marker Mutation Deletion Methylation
Presence Description Presence Description Presence
APCNDNDN/AN/AND
BRAFNDNDN/AN/AN/A
CDK4NDNDN/AN/AN/A
CTNNB1NDNDN/AN/AN/A
NRASNDNDN/AN/AN/A
PTENNDNDNDNDN/A
RASSFIAN/AN/AN/AN/AND
RB1NDNDNDNDN/A
TP53NDNDN/AN/AN/A
p16NDNDNDNDND
p27N/AN/AN/AN/AND