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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   Z83199; SV 1; linear; mRNA; STD; FUN; 1396 BP.
XX
AC   Z83199;
XX
DT   06-MAY-1998 (Rel. 55, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   A.bisporus mRNA for endo-1,4-beta xylanase.
XX
KW   endo-1,4-beta xylanase; xlnA gene.
XX
OS   Agaricus bisporus
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Agaricomycetidae; Agaricales; Agaricaceae; Agaricus.
XX
RN   [1]
RC   (sites)
RX   DOI; 10.1006/jmbi.1997.1605
RX   PUBMED; 9514754.
RA   Groot P.W.J., Basten E.J.W., Sonneberg A.S.M., van Griensven L.J.L.D.,
RA   Visser J., Schaap P.J.;
RT   "The endo01,4-beta-xylanase-encoding gene from Agaricus bisporus is
RT   regulated by compost-specific factors";
RL   J. Mol. Biol. 277(2):273-284(1998).
XX
RN   [2]
RP   1-1396
RA   Groot P.W.J.;
RT   ;
RL   Submitted (04-DEC-1996) to the EMBL/GenBank/DDBJ databases.
RL   Groot P.W.J., Wageningen Agricultural University, Section MGIM, Dreijenlaan
RL   2, Wageningen, The Netherlands, 6703 HA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1396
FT                   /organism="Agaricus bisporus"
FT                   /chromosome="5"
FT                   /strain="Horst U1"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:5341"
FT   CDS             200..1201
FT                   /gene="xlnA"
FT                   /product="endo-1,4-beta xylanase"
FT                   /db_xref="GOA:O60206"
FT                   /db_xref="InterPro:IPR001000"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/Swiss-Prot:O60206"
FT                   /protein_id="CAB05665.1"
FT                   /translation="MYLVAFMLLAILPTGYCQLNTLAVRAGKKYFGTATDNPELGDAPY
FT                   VAQLGNTADFNQITAGNSMKWDATEPSRGTFTFSNGDTVANMARNRGQLLRGHTCVWHS
FT                   QLPNWVTSGNFDNSTLLSIVQNHCSTLVSHYRGQMYSWDVVNEPFNEDGSFRQSVFFQK
FT                   TGTAYIATALRAARNADPNTKLYINDFNIEGTGAKSTGMINLVRSLQQQNVPIDGIGVQ
FT                   AHLIVGQIPSSIQQNLQNFANLGVEVAITELDIRMTLPVTQQKLEQQQEDYRTVIRACK
FT                   AVSRCVGVTVWDWTDRYSWVPGVFNGEGAACPWDENLAKKPAYQGIVDGWSQ"
FT   polyA_site      1373
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
XX
SQ   Sequence 1396 BP; 384 A; 339 C; 315 G; 358 T; 0 other;
     aagcaagaag caccatgcac tcggcaaatc cctggcgggg gtgaactatt ccctcacttt        60
     ggttacgccg ctcagaatta cattcccatg acatgtgtta tttctggaag agtgtttatt       120
     taatagctta gctgtcaacg tctggaagca gggtacctcc acctctcatt tcttgttgcc       180
     ctataatcgc taagtcaaaa tgtatctcgt cgcgtttatg cttctcgcta tactgccgac       240
     aggctattgc caactcaata cgcttgccgt acgagctgga aagaaatatt ttggtactgc       300
     aaccgataat cctgaattgg gagatgctcc gtatgttgcc caactcggta acacggcaga       360
     tttcaatcaa atcaccgcgg gaaacagtat gaaatgggac gccacggagc cctcccgagg       420
     aactttcacc ttttcaaatg gcgacacagt tgccaacatg gcccgaaacc gtgggcagct       480
     tctcagaggg cacacctgtg tttggcactc gcagcttcca aactgggtca catctggcaa       540
     ttttgacaat tcaacccttc taagcattgt ccaaaaccac tgctcgactt tagtctccca       600
     ttacaggggt caaatgtaca gttgggatgt agtcaatgag ccgttcaacg aggatggcag       660
     ctttaggcaa tcagtcttct tccagaagac tgggaccgct tatatcgcca cagcactccg       720
     agccgctcgt aatgcagacc cgaacacgaa gctctatatc aacgatttca acattgaagg       780
     taccggggcc aagtccactg gcatgattaa tctcgtccgg agccttcaac agcagaacgt       840
     ccccattgac ggcatcggcg tacaagctca cttgattgtt ggccaaattc cttccagtat       900
     acagcaaaat ctacagaact ttgcgaacct cggagtagaa gtcgcaatta ctgagcttga       960
     tatcagaatg acacttcctg tcacacagca aaagcttgag caacagcaag aagattatcg      1020
     gaccgtcatt cgggcatgca aggctgtttc ccgctgcgtc ggtgttacag tttgggattg      1080
     gactgatagg tactcttggg ttccaggagt tttcaatggt gaaggagccg cttgcccatg      1140
     ggatgaaaat ttggcgaaga aacccgcata tcaaggcatc gtggatggct ggagtcaatg      1200
     agccaatgag gatcacggtg taactccaga tagtgaaact gaatcttttg agttacctac      1260
     taactgttgg tctcgcttgg acgagacttt gttaaaaaat atggccactt catttctcca      1320
     tttacgtttg tgacaccggt tatcattgac cgagaatgtt attctgctta tataaaaaaa      1380
     aaaaaaaaaa aaaaaa                                                      1396
//
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