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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   Z68209; SV 1; linear; genomic DNA; STD; PRO; 1662 BP.
XX
AC   Z68209;
XX
DT   13-DEC-1995 (Rel. 46, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 9)
XX
DE   M.flavescens DNA gyrase subunit A gene
XX
KW   DNA gyrase; intein.
XX
OS   Mycobacterium flavescens
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium.
XX
RN   [2]
RP   1-1662
RA   Fsihi H.;
RT   ;
RL   Submitted (12-DEC-1995) to the EMBL/GenBank/DDBJ databases.
RL   Hafida Fsihi, Unite de Genetique Molec. Bacterienne, Institut Pasteur, 28
RL   rue du Docteur Roux, Paris Cedex 15, 75724, France
XX
RN   [3]
RP   1-1662
RX   DOI; 10.1073/pnas.93.8.3410
RX   PUBMED; 8622949.
RA   Fsihi H., Vincent V., Cole S.T.;
RT   "Homing events in the gyrA gene of some mycobacteria";
RL   Proc. Natl. Acad. Sci. U.S.A. 93(8):3410-3415(1996).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1662
FT                   /organism="Mycobacterium flavescens"
FT                   /strain="Fla0 (reference number 930991)"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1776"
FT   CDS             <1..>1662
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="DNA gyrase subunit A"
FT                   /note="precursor"
FT                   /note="A 1263 bp sequence (residue 208-1470) encoding an
FT                   intein is present in the gyrA gene of M. flavescens. This
FT                   Mfl-gyrA intein contains all the motifs described for such
FT                   protein introns."
FT                   /db_xref="GOA:Q49166"
FT                   /db_xref="InterPro:IPR002205"
FT                   /db_xref="InterPro:IPR003586"
FT                   /db_xref="InterPro:IPR003587"
FT                   /db_xref="InterPro:IPR004042"
FT                   /db_xref="InterPro:IPR006141"
FT                   /db_xref="InterPro:IPR006142"
FT                   /db_xref="InterPro:IPR013758"
FT                   /db_xref="InterPro:IPR013760"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q49166"
FT                   /protein_id="CAA92433.1"
FT                   /translation="RGIFRPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSL
FT                   RYPLVDGQGNFGSPGNDPPAAMRYCVTGDALVRLPFGQSVRLRDVVAGARSSSDNAIDL
FT                   KVLNRHGDPVVADKLFHSGEHETYTVRTAEGYEVTGTANHPLLCLVDVGGVPTLLWKLT
FT                   EEIRPGDHVVLQRTPPTEFGPADWQDAFEALHLGAFISEGFVSENRAGFNNLDREFFNA
FT                   VLTAYDTIVGGPRYVSSRTIASDSLLHELDVHNLTALKKSRLGELVGQRSADKAVPEWL
FT                   WKAPAVVKRVFLQALFEGDGSCSALPRNTIQVSYSTRSGRLAKDIQQMLLEFGVISRRY
FT                   VHATGEHKVVLTSRAQAELFAAQIGFGGIKQAKLQGLLDALPQAAAGRDGDYVPGLAQF
FT                   VRKHSGSRWVDKDWLNRHNIDRLSRWQRDGAEILGRIADPDVRAIAQELTDGRFYYARV
FT                   ASVTDSGVQPVYSLRVDTDDHSFITNGFVSHNTEARLTPLAMEMLREIDEETVDFIPNY
FT                   DGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHN"
XX
SQ   Sequence 1662 BP; 318 A; 523 C; 518 G; 303 T; 0 other;
     cgcgggattt tccgcccgga ccgcagccac gcgaaatccg cacgctccgt agccgagacg        60
     atgggtaact accacccgca cggtgacgcc tcgatctacg acaccctcgt gcgtatggcg       120
     cagccgtggt cgctgcgcta cccgctggtc gacgggcagg gcaacttcgg ttcgccgggc       180
     aacgacccgc cggccgccat gaggtactgc gtcacaggtg atgcgctggt gcgcttgcca       240
     ttcgggcaat ccgtacggct ccgtgatgtc gtagcgggcg cgcggtcgag ctcggacaac       300
     gccattgatc tcaaggtcct caaccggcac ggggaccctg tggttgccga caaattgttc       360
     cattccggcg aacatgagac atacaccgtt cgcaccgcag aaggctatga ggtcacgggc       420
     actgccaacc acccgttgct atgcctggtt gacgtgggtg gtgtgccgac gctgctgtgg       480
     aagctgaccg aagaaattcg accaggcgac cacgtggttc tccagcgcac cccgccgacg       540
     gagttcggtc ccgcggactg gcaggatgct ttcgaggcgc tacatctcgg agccttcatc       600
     agcgagggtt tcgtatcgga aaaccgtgct ggcttcaaca atctggaccg cgagttcttc       660
     aacgccgtcc tgactgctta cgacacaatt gttggcggcc cccgctacgt atcgtcgcgc       720
     accatcgcct cggactccct actccacgaa ctcgacgtac ataatttgac ggcgctgaag       780
     aagtctcgac tcggcgagtt ggttgggcag cgctcagccg acaaggcggt gccggaatgg       840
     ttgtggaagg caccggctgt cgtcaagcga gtgttcctgc aggcgctgtt cgagggagac       900
     ggatcgtgtt ctgcgttgcc gaggaacacg attcaggtct cgtattcgac ccgcagcgga       960
     cgtcttgcca aggacatcca gcagatgctg ttggaattcg gggtgatctc gcgccgctac      1020
     gtgcacgcca ccggggagca caaggtcgtg ctgacaagca gggcccaggc tgaactgttc      1080
     gctgcgcaga tcggattcgg cggaataaag caggcgaagc tgcagggtct attggacgca      1140
     cttccccagg cggcggccgg ccgggacggc gactacgtgc cgggtctcgc ccaattcgtt      1200
     cgtaagcaca gcggcagccg ctgggtcgac aaggactggc tgaacagaca caacatcgac      1260
     cggctgtctc gctggcaacg cgatggtgct gagattctcg gccgcatcgc cgatcccgac      1320
     gtccgggcaa tcgctcagga actcaccgac ggccggttct actacgcgcg tgtggcatcc      1380
     gtgactgata gcggtgtgca accggtgtac agcctgaggg tcgacaccga tgaccactcg      1440
     ttcatcacaa acggcttcgt cagccacaac acggaggcgc ggctcactcc cctggcgatg      1500
     gagatgctgc gcgaaatcga cgaggagaca gtcgatttca tcccgaacta cgacgggcgg      1560
     gtgcaggaac ccaccgtcct gccgagccgg ttccccaacc tgttggccaa cggttcgggc      1620
     ggtatcgccg tcggtatggc caccaatatc ccgccgcaca ac                         1662
//
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