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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   Z68208; SV 1; linear; genomic DNA; STD; PRO; 1650 BP.
XX
AC   Z68208;
XX
DT   13-DEC-1995 (Rel. 46, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 9)
XX
DE   M.gordonae DNA gyrase subunit A gene
XX
KW   DNA gyrase; intein.
XX
OS   Mycobacterium gordonae
OC   Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC   Corynebacterineae; Mycobacteriaceae; Mycobacterium.
XX
RN   [2]
RP   1-1650
RA   Fsihi H.;
RT   ;
RL   Submitted (12-DEC-1995) to the EMBL/GenBank/DDBJ databases.
RL   Hafida Fsihi, Unite de Genetique Molec. Bacterienne, Institut Pasteur, 28
RL   rue du Docteur Roux, Paris Cedex 15, 75724, France
XX
RN   [3]
RP   1-1650
RX   DOI; 10.1073/pnas.93.8.3410
RX   PUBMED; 8622949.
RA   Fsihi H., Vincent V., Cole S.T.;
RT   "Homing events in the gyrA gene of some mycobacteria";
RL   Proc. Natl. Acad. Sci. U.S.A. 93(8):3410-3415(1996).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1650
FT                   /organism="Mycobacterium gordonae"
FT                   /strain="Gor0 (reference number 930835)"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1778"
FT   CDS             <1..>1650
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="DNA gyrase subunit A"
FT                   /note="precursor"
FT                   /note="A 1260 bp sequence (residue 199-1458) encoding an
FT                   intein is present in the gyrA gene of M. gordonae. This
FT                   Mgo-gyrA intein contains all the motifs described for such
FT                   protein introns."
FT                   /db_xref="GOA:Q49467"
FT                   /db_xref="InterPro:IPR002205"
FT                   /db_xref="InterPro:IPR003586"
FT                   /db_xref="InterPro:IPR003587"
FT                   /db_xref="InterPro:IPR004042"
FT                   /db_xref="InterPro:IPR006141"
FT                   /db_xref="InterPro:IPR006142"
FT                   /db_xref="InterPro:IPR013758"
FT                   /db_xref="InterPro:IPR013760"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q49467"
FT                   /protein_id="CAA92432.1"
FT                   /translation="FRPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSLRYP
FT                   LVDGQGNFGSPGNDPPAAMRYCLTGDALVRLPFGQSMRIGDVAPGARTNSDNAGELKVL
FT                   DRHGDPVFADRLFHSGDHQTFRVQTAEGYEVTGTSNHPVLCLVNLAGVPTLLWMLIEEI
FT                   RPDDYVVLQRAPPVESGPANWRDAMEALLLGAFISEGFMSESRAGFNNVDRDYFNAVVA
FT                   AYDAVVGGKRYVAQRTIASGSVLNELDIHDVSALKGTRLGVLCGQRSADKSVPEWLWQS
FT                   PAAVKRVFLQALFEGDGSCSALPRNTIQVSYSTRSRQLAIDVQQMLLEFGVISRRYRHA
FT                   VGEYKVVITNRAQAELFATQIGFGGAKQSKLTRILGSLPPCAGMDTNHVPGLAAFIRSH
FT                   CDSEWVDKEWLRKHNIDRLSRWRRDGAEILSRIANPDVRAIATDLTDGRFYYAQVTSVT
FT                   EAGVQPVYSLRVDSEDHAFLTNGFVSHNTEARLTPLAMEMLREIDEETVDFIPNYDGRV
FT                   QEPTVLPSRFPNLLANGSGGIAVGMATNIPPHN"
XX
SQ   Sequence 1650 BP; 311 A; 509 C; 503 G; 327 T; 0 other;
     ttccgcccgg accgcagcca cgccaagtcg gcgcgctcgg tggccgagac catgggtaac        60
     taccacccgc acggtgacgc gtcgatctac gacaccctgg tgcgcatggc gcagccgtgg       120
     tcgctgcgct acccgctggt cgacgggcag gggaacttcg gctcgccggg gaatgacccg       180
     ccggccgcga tgcggtattg tctcaccgga gatgcattgg tgcgcttacc atttggacag       240
     tcgatgcgaa tcggcgatgt cgctccgggg gctcggacaa attcggacaa cgccggcgag       300
     ttgaaggtcc tcgataggca cggtgacccg gttttcgctg atcgcttgtt ccattcgggt       360
     gatcaccaga ctttcagggt gcaaactgcc gagggctatg aggtcacagg cacttcgaat       420
     caccctgtgc tttgcctggt gaacctcgcc ggcgtgccga cactcctgtg gatgttgatc       480
     gaggagattc gaccagacga ctacgtcgtc ttacagcgcg cgccgcctgt tgaatcaggt       540
     ccggcgaact ggcgcgacgc catggaggca ctgttactcg gggccttcat cagcgaaggg       600
     ttcatgtccg agtctcgagc tggttttaac aacgtcgacc gcgactactt caacgcggtg       660
     gtagcggcct acgacgcggt tgtcggaggc aagcggtacg tagctcaacg gactatcgcg       720
     tcgggttctg tgctgaacga gttggatatt cacgatgttt cagctttgaa gggcactcgg       780
     ctcggtgtgc tctgcgggca acgctccgca gacaaatcgg tgcccgagtg gctttggcaa       840
     tcccccgccg cggtgaagcg ggtattcctg caggcgttgt tcgagggtga tggctcgtgt       900
     tcggcgttac cccgcaacac aattcaggtt tcttattcga cacgtagtag acagcttgcc       960
     atcgatgtgc aacagatgct gctcgagttc ggagtcatat cgcgccggta ccgccatgcc      1020
     gtcggtgagt ataaggtcgt cataaccaac cgtgctcagg ccgagctttt cgccactcaa      1080
     atcggtttcg gcggcgccaa acaaagtaag ctgaccagga tcctgggttc actgccgccc      1140
     tgcgccggca tggacaccaa ccacgttccc ggcctggccg ctttcatccg cagccattgc      1200
     gatagcgaat gggtagataa ggagtggctg cgtaagcaca acatcgatcg gctgtcccgg      1260
     tggcgtcgcg acggtgcgga aatactctcg cgcatcgcga accccgatgt tcgtgccatc      1320
     gcaaccgacc tcaccgacgg gcgcttctac tacgcccaag taacctcggt cacagaggcg      1380
     ggcgtgcagc cggtgtacag cctgcgcgtt gactccgagg atcacgcctt cctgaccaac      1440
     ggattcgtca gccacaacac cgaggcgcgg ctcaccccgt tggccatgga gatgctgcgc      1500
     gaaatcgacg aggaaacagt cgatttcatc ccgaactacg acggccgggt gcaggagccg      1560
     accgtcctgc ccagccggtt ccccaacctg ctggccaacg gttcgggcgg catcgccgtc      1620
     ggtatggcca ccaatatccc gccgcacaac                                       1650
//
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