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EBI Dbfetch

ID   Z48928; SV 2; linear; genomic DNA; STD; PRO; 2000 BP.
XX
AC   Z48928;
XX
DT   30-MAR-1995 (Rel. 43, Created)
DT   14-NOV-2003 (Rel. 77, Last updated, Version 8)
XX
DE   Cellvibrio japonicus gene for endo-beta-1,4-xylanase.
XX
KW   endo-beta-1,4-xylanase.
XX
OS   Cellvibrio japonicus
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Cellvibrio.
XX
RN   [2]
RC   revised by [4]
RA   Clarke J.H.;
RT   ;
RL   Submitted (30-MAR-1995) to the EMBL/GenBank/DDBJ databases.
RL   Clarke J. H., The Babraham Institute, Department of Cellular Physiology,
RL   Babraham, Cambridge, Cambridgeshire, UK, CB2 4AT
XX
RN   [3]
RX   PUBMED; 7492333.
RA   Millward-Sadler S.J., Davidson K., Hazlewood G.P., Black G.W.,
RA   Gilbert H.J., Clarke J.H.;
RT   "Novel cellulose-binding domains, NodB homologues and conserved modular
RT   architecture in xylanases from the aerobic soil bacteria Pseudomonas
RT   fluorescens subsp. cellulosa and Cellvibrio mixtus";
RL   Biochem. J. 312:39-48(1995).
XX
RN   [4]
RP   1-2000
RA   Gilbert H.J.;
RT   ;
RL   Submitted (13-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   Gilbert H.J., School of Cell and Molecular Biosciences, University of
RL   Newcastle upon Tyne, NE1 7RU, UNITED KINGDOM
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2000
FT                   /organism="Cellvibrio japonicus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:155077"
FT   RBS             79..82
FT   CDS             91..1911
FT                   /transl_table=11
FT                   /product="endo-beta-1,4-xylanase"
FT                   /function="hydrolysis of beta-1,4-D-xylan"
FT                   /EC_number="3.2.1.8"
FT                   /db_xref="GOA:Q59675"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="PDB:1GNY"
FT                   /db_xref="UniProtKB/TrEMBL:Q59675"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAA88764.2"
FT                   /translation="MKKIQQLLMLSLISSTLIACGGGGGGGSTPTTSSSPQSSSPASTP
FT                   SSASSSSIISSSSLSSSLSSSSLSSSSLSSSSASSVSSSSVAASEGNVVIEVDMANGWR
FT                   GNASGSTSHSGITYSADGVTFAALGDGVGAVFDIARPTTLEDAVIAMVVNVSAEFKASE
FT                   ANLQIFAQLKEDWSKGEWDCLAASSELTADTDLTLTCTIDEDDDKFNQTARDVQVGIQA
FT                   KGTPAGTITIKSVTITLAQEAYSANVDHLRDLAPSDFPIGVAVSNTDSATYNLLTNSRE
FT                   QAVVKKHFNHLTAGNIMKMSYMQPTEGNFNFTNADAFVDWATENNMTVHGHALVWHSDY
FT                   QVPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTD
FT                   SAFYVKSGNSSVYIERAFQTARAADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARSI
FT                   PIDGVGFQMHVCMNYPSIANISAAMKKVVDLGLLVKITELDVAVNQPHCDAYPANKINP
FT                   LTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTDANTWLDGLYREQFEDEKISW
FT                   PLLFDNNYNDKPALRGFADALIGTQCTNTH"
FT   sig_peptide     91..147
XX
SQ   Sequence 2000 BP; 534 A; 556 C; 469 G; 441 T; 0 other;
     atcgactggt atacaagaaa aactcactta tggtttaatt gacaataata aaggcgcgat        60
     cacaataatc aaactaacga gactccagca atgaaaaaga tccagcaact cctcatgctc       120
     tccctgatta gctcaacact aattgcctgt ggcggcggtg gagggggcgg ttcaacacca       180
     accaccagca gctcacccca atcctctagt ccagcatcga cgccatccag tgcttcatcc       240
     tcatcgatca tatcctcctc atcgctatca tcatcgctgt cttcctcatc actatcctcg       300
     tcatcgctgt cttcttcatc ggcgagcagt gttagcagct ccagtgtcgc tgccagcgag       360
     ggcaatgttg ttatagaggt ggacatggca aatggctgga gaggcaacgc atcaggcagt       420
     accagccatt ccggtattac ctacagtgcc gatggcgtta cctttgccgc actgggtgat       480
     ggcgtgggcg ctgtttttga tattgcccga ccaaccacac tggaagatgc tgtgatagca       540
     atggttgtta atgtcagcgc tgaatttaag gccagtgaag ccaacttgca gatatttgcc       600
     cagttaaaag aagactggtc aaagggcgaa tgggattgtc tggcggccag cagcgaactc       660
     actgcggata ctgacctaac cctgacctgc accattgatg aagacgacga taaattcaac       720
     caaacggcgc gcgatgtaca agtcggtatc caggccaagg gaacacccgc cggaactatc       780
     accattaaaa gcgtcaccat tacactcgca caggaagcct attcagccaa tgtcgatcac       840
     ctgcgcgacc tggcccccag cgatttcccc attggcgtcg ccgtgtccaa taccgactcc       900
     gccacttaca acctgctcac caacagcaga gagcaggctg tggttaaaaa gcacttcaat       960
     catttaactg ccggtaacat catgaagatg agttacatgc aacctaccga gggcaatttt      1020
     aacttcacca acgccgacgc ctttgtggat tgggccactg aaaataatat gacggtgcac      1080
     ggccacgccc tggtatggca ttccgattac caggttccca actttatgaa aaactgggca      1140
     ggcagtgcag aagacttttt agcggccttg gacacacata tcaccaccat tgtcgatcac      1200
     tacgaagcca agggtaacct cgtcagttgg gacgtcgtta acgaagccat cgacgacaac      1260
     agtccggcaa acttccgcac gacggattct gcgttttatg tgaagagcgg aaacagctct      1320
     gtctatattg agcgcgcctt ccagaccgcg cgcgcggcag atcccgctgt gatcctctac      1380
     tacaacgact acaacattga gcagaacaat gccaagacca ccaaaatggt cgatatggtc      1440
     aaggacttcc aggcgcgcag tatcccgatt gacggtgtgg gcttccagat gcatgtctgt      1500
     atgaactatc catccatcgc caacatttct gccgcgatga agaaagtggt cgaccttggc      1560
     ttgctggtaa aaattaccga actggatgtt gccgtcaacc agccccattg cgatgcgtat      1620
     ccggccaaca aaatcaatcc gctgaccgaa gcggcgcaat tggcccagaa aaaacgctac      1680
     tgcgacgtag tgaaggccta tctggataca gtcccggtga atcagcgcgg cggtatcagc      1740
     gtctggggaa ctaccgatgc caacacctgg cttgatggcc tgtacagaga acagtttgag      1800
     gatgaaaaaa tttcctggcc cttgctgttc gacaacaact acaacgacaa acctgcactg      1860
     cgcggttttg ccgatgcgtt aatcggtacg caatgtacta atacacattg attgcattga      1920
     tgtaaaaaag gctccaccca tgccgctaaa aacgctagcc gcttttgcgg catccatcag      1980
     cctgttactg gccagcccat                                                  2000
//


  
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