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EBI DbfetchID Z35226; SV 1; linear; genomic DNA; STD; PRO; 2727 BP. XX AC Z35226; XX DT 15-JUL-1994 (Rel. 40, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 5) XX DE R.flavefaciens (17) xynB gene XX KW xylanase; xynB gene. XX OS Ruminococcus flavefaciens OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Ruminococcus. XX RN [1] RC (sites) RX DOI; 10.1007/BF00283275 RX PUBMED; 7816035. RA Zhang J.X., Martin J., Flint H.J.; RT "Identification of non-catalytic conserved regions in xylanases encoded by RT the xynB and xynD genes of the cellulolytic rumen anaerobe Ruminococcus RT flavefaciens"; RL Mol. Gen. Genet. 245(2):260-264(1994). XX RN [2] RP 1-2727 RA Flint H.J.; RT ; RL Submitted (13-JUL-1994) to the EMBL/GenBank/DDBJ databases. RL Flint H. J., Rowett Research Institute, Nutrition Division, Greenburn Road, RL Bucksburn, Aberdeen, United Kingdom, AB2 9SB XX FH Key Location/Qualifiers FH FT source 1..2727 FT /organism="Ruminococcus flavefaciens" FT /strain="17" FT /mol_type="genomic DNA" FT /clone_lib="lambda EMBL3 (subcloned into pUC13)" FT /clone="X10 also PCR amplification from genome." FT /db_xref="taxon:1265" FT CDS 270..2615 FT /transl_table=11 FT /gene="xynB" FT /product="XynB" FT /function="Xylanase" FT /db_xref="GOA:Q52753" FT /db_xref="HSSP:1F5J" FT /db_xref="InterPro:IPR018208" FT /db_xref="UniProtKB/TrEMBL:Q52753" FT /citation=[1] FT /protein_id="CAA84537.1" FT /translation="MRFKALKKILSGTVSALMIAVSMPTSFSVHADDQQDKGNVGGYDW FT EMWNQNYTGTVSMKPSAGSFTCSWSGIENFLARMGKNYDSQKINYKALGDIVLSYDVEY FT TPRGNSYMCIYGWTRNPLMEYYIVEGWGDWEPPGNDGVDNFGTATIDGRTYKIRKSMRY FT NQPSIEGTKTFPQYWSVRTSSGSRNNTTNYMKDSVTVSAHFDAWSKAGLDMSGTLYEVS FT LNIEGYRSNGSANVKSITVGGDPPPPKEPVKADENGYYLKENFESGTGDWGARGSAKVE FT SSSTGYDGSKGIYVSGRTNNWNGASIKLDTSTFVPGETYSLGAAVMQDSEASVDLKLTL FT QYTDANGKDNYDEVKTVSAAKGQWTDLSNASYTIPADASGLELYIEAPDSLTDFYVDGA FT YAGVKGTKPLLSIDPSQQPVITDPITTQPPSSNVDKNKTIKILPAGDSITNGDGEQGGY FT RKYLFDALSKLGYTKIDMVGPNRDRSNTANGITYDTDHAGFSGYQIKEVPSWGQQQGGK FT GSLYNELKNNDVVKKTQPDIILLMIGTNDLTANRSMDACTADLRSMLDYMLGDMPSGGM FT IFLCSVPEHTAYGGNTQKIANYNNTVKSVAEEYANKGKNVRFADVHGCLDGMNDISSQD FT HLHPNGTGYKKMGNFFAGVIDDYITSLAPPVTTTTSTTTTTTTTTTTTTTTTTATTTTT FT TTTTAEPELTVKKAGDANDDGNLDLADAILIMQALANPNKYGLEGTAEKHLTEQGKVNA FT DVDKSTKGLTADDALMIQEFLIGKVASL" FT sig_peptide 270..353 FT /note="putative" FT /citation=[1] XX SQ Sequence 2727 BP; 822 A; 635 C; 624 G; 646 T; 0 other; caatgcagta aaaaagtata acaaacaaaa aagcttcaca ggtcagaact gtgaagcttt 60 tttacaatta tgaaaataac gaacaattat tgcttaatgt agcgcaatta ttgctatttg 120 tgccgaatca tattgacaaa tgcctatcat tagtataaat tataagtgaa aaagaataaa 180 ttaggatggg aattggcagg attatttatt cttttttacg aaaacaggct tgaaagcaat 240 aacatcgtaa gaattaagga gtgatgatta tgagatttaa agctttgaaa aaaatattga 300 gcggtactgt ttctgcgctt atgatcgcag taagtatgcc gacatctttt tccgttcatg 360 ccgatgacca gcaggataaa ggcaatgtag gcggatacga ctgggagatg tggaatcaga 420 actatacagg tacggtttcc atgaagccca gtgcaggttc ctttacctgc tcatggagcg 480 gtattgagaa cttccttgcc cgtatgggta agaactacga ctcacagaag atcaattaca 540 aggctctggg cgacatcgtg ctctcctatg acgttgagta cactccccgc ggtaactcgt 600 atatgtgtat ctacggctgg accagaaatc ctcttatgga gtactacata gttgagggct 660 ggggcgactg ggagccaccc ggaaatgacg gcgtagacaa tttcggtact gcaaccatcg 720 acggaaggac ctacaagata cgcaagtcta tgcgttacaa tcagccttcc atcgagggta 780 caaagacatt cccgcagtac tggagcgtcc gcacttcaag tggttcacgc aacaatacca 840 caaactacat gaaggacagc gttaccgttt cggcacactt tgacgcatgg agcaaggctg 900 gccttgacat gagcggtact ctttacgagg tatcactgaa tatcgagggc tacagatcca 960 acggctccgc aaacgttaag agtattaccg taggcggtga tcctccgcct ccgaaggagc 1020 ccgttaaggc tgacgagaac ggctattatc tcaaggagaa cttcgagtcc ggtacaggag 1080 actggggtgc aagaggttct gcaaaggtag agtcttcaag cacaggatat gacggttcaa 1140 agggtattta tgtatcaggc cgtactaata actggaacgg agcttccata aagcttgata 1200 cctccacatt cgtgcccggc gagacctaca gtctcggtgc tgctgtaatg caggattccg 1260 aagcatcagt tgacttaaag ctcacacttc agtatacaga cgcaaacggc aaggataatt 1320 acgatgaagt aaagactgtt tctgctgcaa agggacagtg gacagatctt tcaaacgctt 1380 catacaccat tcctgccgac gcatcgggac ttgagctcta tatcgaagct cccgacagtc 1440 ttactgactt ctatgttgac ggagcttacg ccggcgttaa gggcacaaag cctctgcttt 1500 cgattgatcc gtcacagcag cctgtaataa cagatcctat aaccacacag cctccttcga 1560 gcaatgttga caagaacaag accataaaga tactgcccgc aggcgactca ataaccaacg 1620 gcgacggcga gcagggcggt tacagaaagt atctctttga cgctctttcc aagttgggct 1680 ataccaagat cgatatggtt ggtcccaacc gtgacagaag caatacagcc aacggtatca 1740 cctatgatac agaccatgca ggcttcagcg gttaccagat caaggaagta cccagctggg 1800 gacagcagca gggcggcaag ggaagcttat acaatgagct caagaacaac gatgtagtaa 1860 agaagacaca gcctgatatc atactgctta tgatcggtac gaacgacctc acagctaacc 1920 gctcaatgga cgcttgtaca gctgatctcc gctctatgtt ggattatatg cttggagata 1980 tgccttcagg cggtatgatc ttcctctgct cagttcccga gcatacagct tacggcggaa 2040 atacgcagaa gatcgcaaac tacaacaata cagtaaagag cgttgccgag gagtacgcaa 2100 acaagggcaa gaacgtaaga tttgccgacg ttcacggctg tcttgacggt atgaacgaca 2160 tcagctcaca agatcacctc cacccaaacg gaacaggcta caagaagatg ggtaatttct 2220 ttgcgggtgt tatagatgat tatatcactt ctctggcacc tcctgtaaca actaccacat 2280 ctactacaac gaccactacc actactacca ctacaactac aacaacaact actgccacca 2340 ctacaactac aacgaccact actgctgaac ctgagcttac tgtaaagaag gcaggagacg 2400 ccaacgacga cggcaatctt gatctggcag atgctattct catcatgcag gcactggcta 2460 atccgaacaa atacggactt gaaggtactg ctgagaagca tcttaccgaa cagggcaagg 2520 tcaatgccga tgttgacaag tccacaaagg gacttacagc tgatgacgca ctcatgatac 2580 aggagttcct catcggtaaa gttgcaagct tataagacat aatttacctt ttacgcaaac 2640 agagtcggga gattttcccg actctgtttg ttttatatca ctttacgatt attaaagggt 2700 atttatatac tcctcgggtg ttttaac 2727 // |
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