 |
|
EBI DbfetchID Y14590; SV 1; linear; genomic DNA; STD; PLN; 2381 BP. XX AC Y14590; XX DT 03-NOV-1997 (Rel. 53, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 4) XX DE Arabidopsis thaliana CHIV gene XX KW chitinase; chiV gene; class IV. XX OS Arabidopsis thaliana (thale cress) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids II; Brassicales; Brassicaceae; Arabidopsis. XX RN [1] RX DOI; 10.1016/S0014-5793(97)01332-X RX PUBMED; 9426222. RA Gerhardt L.B.A., Sachetto-Martins G., Contarini M.G., Sandroni M., RA Ferreira R.P., de Lima V.M., Cordeiro M.C., de Oliveira D.E., RA Margis-Pinheiro M.; RT "Arabidopsis thaliana class IV chitinase is early induced during the RT interaction with Xanthomonas campestris"; RL FEBS Lett. 419(1):69-75(1997). XX RN [2] RP 1-2381 RA Gehardt L.B.A.; RT ; RL Submitted (13-AUG-1997) to the EMBL/GenBank/DDBJ databases. RL L.B. de A. Gehardt, Laboratorio de Genetica Molecular Vegetal, IB, CCS, RL UFRJ, R. Brigadeiro Trompowski s/n, Cidade Universitaria, Ilha do Fundao, RL 21944-970 Rio de Janeiro/RJ, BRAZIL XX FH Key Location/Qualifiers FH FT source 1..2381 FT /organism="Arabidopsis thaliana" FT /mol_type="genomic DNA" FT /clone_lib="16.1" FT /clone="EcoRI/BamHI" FT /clone="PstI/BamHI" FT /clone="EcoRI/PstI" FT /clone="HindIII/BamHI" FT /note="ecotype Columbia" FT /db_xref="taxon:3702" FT promoter 1..1083 FT TATA_signal 1008..1015 FT CDS join(1084..1502,1779..2184) FT /gene="CHIV" FT /product="class IV chitinase" FT /EC_number="3.2.1.14" FT /db_xref="GOA:O23248" FT /db_xref="HSSP:1MMC" FT /db_xref="InterPro:IPR016283" FT /db_xref="UniProtKB/TrEMBL:O23248" FT /protein_id="CAA74930.1" FT /translation="MLTPTISKSISLVTILLVLQAFSNTTKAQNCGCSSELCCSQFGFC FT GNTSDYCGVGCQQGPCFAPPPANGVSVAEIVTQEFFNGIISQAASSCAGNRFYSRGAFL FT EALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGRNFCYIEEIDGASKDYCDENATQYP FT CNPNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATDPVISFKTALWYWTNRVQ FT PVISQGFGATIRAINGALECDGANTATVQARVRYYTDYCRQLGVDPGNNLTC" FT exon 1084..1502 FT /number=1 FT exon 1779..2184 FT /number=2 FT intron 1503..1778 FT /number=1 XX SQ Sequence 2381 BP; 736 A; 455 C; 422 G; 768 T; 0 other; ctgcagatct tcctggtgac tatatatgtc ttcaaggaga ctttcaagtt tcatttcttt 60 acaagaatgt tactctcttt acctcacctc cacaaaagta agctgtttac tattaacaac 120 ctccgatacc gctgttctca gcttcttaaa gtttctgttg ttgtctccga cgaaaacatt 180 agttcgattg gaacatacat tatggaagat gtcaaagaga agaagcaagt aacttttgga 240 ttgcagtttt ctcttaccga ttgcagaaaa aagacgttag gagttatgag ttatgcatgc 300 tgtggagtca ccttgaggtt cgaacccgga tctgagatga aggcgtctgt gtttggaaag 360 catccaaggt acacaaattt ctgaccaagt ccacgtcaac accagtataa tgttagagtt 420 tgcaaagatt tgacattact taagggcttt attgaattag agatttagtt tatttgtaaa 480 tgactttaga tttggttcga ctttatttag ggtctaaagt ttattgtata actgtttaat 540 atttgtcagg acttaatgaa gatgtaatgt ttagactttg gtgtattttg tacgacatgc 600 atgatataat aaaggaatta tcataattaa attgaactta taaaaatatg acttgcctta 660 cttctctttt gaaatagaaa ttctaatgta ggtaaaatgt ttgtgtttac ataattacat 720 tacatcaaca aacgtaaaaa aatgtttgtg tcattaaatg tttatccacg tactcttcac 780 aacgatcata agtcataatt cagaaaattc ctttaataaa tgtgaactga aaaagctttt 840 gtatagtcat caaataaaaa gtcaactgta caattaaaag tccgcaaaca tctcgatcgt 900 ctaagagacg acttttctcg taactttatg aagaatatac aatagtagtg gcttgatcgc 960 gtccacacat ttacattgcg acttttcttg catgccgtct cacgcactat atttaggcaa 1020 aacacaattg tcttcatttc aagactagtt cttgttttct ccatattcct caacaacatc 1080 aaaatgttga ctcccaccat ttctaaatcc atctctttag taaccattct attagttcta 1140 caagctttct ctaacacaac aaaggctcaa aattgcggtt gttcgtcaga gctatgttgt 1200 agtcagtttg gcttttgcgg taacacttca gactattgtg gtgtaggttg ccaacaagga 1260 ccttgttttg ctcctccccc tgcaaatggt gtctctgtgg ctgagattgt aacgcaagaa 1320 ttcttcaatg gaatcatcag tcaagccgcg tctagttgcg ccggcaatag attttacagt 1380 cggggagctt ttcttgaggc cttagactca tattctcgtt tcggtagagt tggatcgacc 1440 gacgactcta ggcgtgagat tgcagcgttc tttgctcatg tcacacatga aacaggacgt 1500 aagtatatat agtaacatgt ttcactttac tcttttcttt atgatgcata catgcatgtt 1560 ctctattaaa taccaaacaa aaacaaaata tgaaaacgtt agaacttgtt tttgttttct 1620 aaaaatcatt agactaaata acatgtttta ctagattagt aatatctttt catcaaacgc 1680 atatagcata atcacttttc aaaatcatag aaacttgact agaaatactt tgaatatgtt 1740 gcagcattcg atctaataat ttcgtttttt gttttagatt tctgctacat agaagagata 1800 gacggagcct caaaggatta ctgcgacgag aatgcaacac aatatccatg caatcctaac 1860 aaaggctact acggccgcgg accgatccaa ctctcttgga atttcaacta cgggccagcc 1920 gggacagcaa ttggtttcga cggcctgaat gcaccggaaa cagtagccac ggatccagtc 1980 atatccttca aaaccgcctt gtggtactgg accaataggg ttcagcctgt tatctctcaa 2040 ggttttggtg caacaatccg tgccattaac ggtgctttgg agtgtgacgg ggccaacaca 2100 gccaccgttc aagctagagt tcgttactac acggattatt gtcgtcaact tggcgttgat 2160 cctggaaaca acctcacttg ctaacaaaaa catctatttc tctgtataca tatataaaag 2220 taaaaataga caagctttaa gaatggaatg gcccattaat gttttgtccc ttaatgtcga 2280 atatatatga aatccactta gttaaaaaaa gacaaaaact ttgagatgaa aacagagaaa 2340 ctttatacac agaatcctat gaagtagttt ccatcatttt t 2381 // |
|