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EBI DbfetchID Y11785; SV 1; linear; genomic DNA; STD; PRO; 3811 BP. XX AC Y11785; XX DT 07-MAY-1997 (Rel. 51, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 5) XX DE R.prowazekii udg dnaE genes XX KW DNA polymerase III alpha subunit; dnaE gene; udg gene; KW UDP-glucose dehydrogenase. XX OS Rickettsia prowazekii OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group. XX RN [1] RX PUBMED; 9274032. RA Andersson J.O., Andersson S.G.E.; RT "Genomic rearrangements during the evolution of the obligate intracellular RT parasite Rickettsia prowazekii as inferred from an analysis of 52015 bp RT nucleotide sequence"; RL Microbiology (Reading, Engl.) 143:2783-2795(1997). XX RN [2] RP 1-3811 RA Andersson S.G.E.; RT ; RL Submitted (10-MAR-1997) to the EMBL/GenBank/DDBJ databases. RL S.G.E. Andersson, Dept. of Molecular Biology, Univesity of Uppsala, RL Husargatan 3, Uppsala, S-751 24, SWEDEN XX FH Key Location/Qualifiers FH FT source 1..3811 FT /organism="Rickettsia prowazekii" FT /strain="Madrid E" FT /mol_type="genomic DNA" FT /clone_lib="A536" FT /db_xref="taxon:782" FT CDS 38..1342 FT /transl_table=11 FT /gene="udg" FT /product="UDP-glucose dehydrogenase" FT /db_xref="GOA:O05973" FT /db_xref="InterPro:IPR001732" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR014026" FT /db_xref="InterPro:IPR014027" FT /db_xref="InterPro:IPR014028" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017476" FT /db_xref="UniProtKB/Swiss-Prot:O05973" FT /protein_id="CAA72478.1" FT /translation="MNITFIGSGYVGLVSGIIMGYLGHNVTCLDNDDVKISKLNKKILP FT IYEAKLDEYLKHALESDRLKFTNIYSNEFRNFDAIFITVGTPSKELGEADLKYVYDAVD FT KVSKHINKDCLIVIKSTVPPGSCNNIIAYLKAKGFSFNVASNPEFLREGSAVEDFLYPD FT RIVVGVNNKESEALLRKIYAPLIEQGAKFLVTNLVTSELIKYVSNSFLATKIAFINEMA FT DLCEKIGANIKDLSQGVGLDQRIGRNFLNAGPGFGGSCFPKDILALNNLVENHKIDCKI FT LKSVIKSNKLRPSNMVAKIATLLDGDLKGRNIAILGLTYKAGTDDVRASPAIEIITILL FT NKDVYVKAFDPIGLENAKKNLEHKNLLYFASAVEACKSVDIIVIATEWSEFKELNWQEI FT YNLVKSPMIIDLRNILDNEVMKKIGFRYYAVGSQI" FT CDS 1470..>3811 FT /codon_start=1 FT /transl_table=11 FT /gene="dnaE" FT /product="DNA polymerase III alpha subunit" FT /db_xref="GOA:O05974" FT /db_xref="InterPro:IPR003141" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004805" FT /db_xref="InterPro:IPR011708" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/Swiss-Prot:O05974" FT /protein_id="CAA72479.1" FT /translation="MQPEFIHLRTQSSYSFLESALTIEKVVELALLHKMPALCLSDRGN FT LFGSLEFSLYAVKKKLQPIHGVILNIQYDINAFAQILLIAKDETGYKNLLKLSSLTFTK FT NDRKICEHIGFEDLIKYQEGVIALCCYTDGIVGKCLLARKQEQAILFARRLQAILGDRF FT YFEIMRHDLPEEQFIENSYIQIASELSIPIVATNKVLFSEKSMHYAHDVLLCISEGVTK FT EYPDRKTVSENCYFKSPAEMRKLFSDLPNAIQNTINLRERCYFAAHPNPPMLPNFSTQD FT ISETYLIRKYATEGLLARLVTKFKAENISLEHQEKLKTEYFTRLNYELDIICNMNFAGY FT FLIVSDFIKWSKKQGILVGPGRGSGAGSVVAWSLLVTDLDPIKFGLLFERFLNPERISM FT PDFDIDFCQERREEVINYVRSKYGPNRVGQIITFGKMQAKAVIKDVARVLSLPYKLADY FT LTELVPFSAINPVSLEQAIREVPELANAAKGNGLYNLEGDAELIKLVLDTSLILEGLHR FT HSSTHAAGIVIAGTDLVDIVPVYKDANADMLIVGYSMKYSEIAGLIKFDFLGLQTLTVI FT TNCKKLLKEQGIKIDFDDMTFDDKKTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIH FT DLIALGALYRPGPMENIPTYIACKHKLQQPDYLHKLLEPILEETYGVVIYQEQVQRIAQ FT VLAGYTLGAADLLRRAMGKKIKKEMEEQEEIFVKGAIANNISPSQAKSIFSTVAKFAGY FT GFNKAHAAAYGVISYQTAYLKANYPAE" XX SQ Sequence 3811 BP; 1304 A; 501 C; 720 G; 1286 T; 0 other; ataatttaaa aatttaatat aaaaatcaca aaaaattatg aatattacat ttatcggtag 60 tggatatgtt ggattagttt caggtattat tatgggatat ttaggtcata atgtgacttg 120 tcttgataat gatgatgtta agatatccaa attaaataag aaaatattac cgatttatga 180 agctaaactt gatgaatatc ttaagcacgc tttggaatct gataggttaa aattcacaaa 240 tatttatagc aatgaattta gaaattttga tgcaatattt attacagtcg gcacaccttc 300 aaaagagtta ggagaagccg atttaaagta tgtttatgat gctgttgata aagtatcaaa 360 acatataaat aaagattgtt taattgtcat caaatctact gtcccgccag gtagttgcaa 420 taatattata gcttatttaa aagcaaaagg tttttcattt aatgttgctt ctaatcctga 480 atttttaaga gaaggcagtg ctgtagaaga ttttttatat cctgatcgta tagttgttgg 540 tgtgaataat aaagaatcag aagcgctatt gagaaaaatt tatgcgcctt taatagaaca 600 aggtgcaaag tttttagtaa ccaatttagt aacgagtgag cttattaaat atgtttcaaa 660 tagtttttta gcaacgaaaa ttgcttttat taatgaaatg gctgatttat gcgaaaaaat 720 cggcgctaac attaaagatt tatctcaagg tgtaggactt gatcaaagaa tcggtcgaaa 780 ttttttaaat gcaggacctg gttttggtgg ttcgtgtttc ccaaaagata ttctggcatt 840 aaataatctt gttgaaaatc ataagatcga ttgtaagatt cttaagtcag taataaagag 900 taataagctg cggccaagta atatggtagc taaaatagct actttgttag atggagattt 960 aaaaggtaga aatatagcaa ttttaggatt aacgtacaaa gccggaacag acgatgttag 1020 agcaagtcct gcaatcgaaa ttataactat tttattaaat aaagatgtat atgttaaagc 1080 atttgatcct atcggtcttg aaaatgctaa aaagaatttg gaacataaaa atttattata 1140 ttttgcttca gccgttgaag catgtaaatc agtggatatt atagttattg caactgagtg 1200 gtcagaattt aaagaactta attggcaaga aatttataat ttagtaaaat caccgatgat 1260 cattgacctt agaaatatac tagataatga agtaatgaaa aaaatcggtt ttagatatta 1320 tgcagttgga agtcagattt aactaaataa gccaagttgt aattagatgt gtctgattga 1380 tctagtaatc tcaggtttta tactgtttga ttagattttt aggttctcta cgttcttgga 1440 cactgaatac ttattaaatt aattttaaaa tgcaacctga atttatacat ttaagaacgc 1500 aaagctctta ttctttctta gaaagtgcct taacgatcga aaaagttgta gaacttgctt 1560 tattacataa aatgcctgct ctttgtttgt cagatagagg taacttattt ggctcactag 1620 agttttcatt atacgcagta aaaaaaaaac tgcagccaat ccacggggtt attcttaata 1680 tacaatatga tataaacgct tttgcacaaa ttttgttgat agctaaagat gaaaccggtt 1740 ataaaaattt actcaaactg tcaagcctga cttttactaa gaatgatcgt aagatatgtg 1800 agcacattgg ttttgaagat ttaatcaaat atcaagaggg agtaatagcg ttatgttgtt 1860 atactgatgg tattgtcgga aaatgcttgc tagctcgtaa gcaggaacaa gctattctgt 1920 ttgctcgtag attacaggca attttaggag accgttttta ctttgagatt atgagacatg 1980 atttaccaga agaacagttt attgagaata gttatattca gatagcttct gaattatcta 2040 ttccaattgt tgctactaat aaagtgttgt ttagtgaaaa aagcatgcat tatgcacatg 2100 atgtattgtt atgtatatca gaaggtgtta ctaaggaata tcctgatcgt aaaacagtta 2160 gtgagaattg ttattttaaa tctcctgctg aaatgagaaa attgttttct gatctaccta 2220 atgcaattca aaataccatc aatttaagag aacgttgtta ttttgcggca cacccaaatc 2280 caccaatgct gcctaatttt tcaactcaag atattagtga aacatattta attagaaaat 2340 atgcaacaga ggggttgctt gcacggctgg ttacaaagtt taaagctgaa aatatttctc 2400 tagaacatca agaaaaatta aaaactgaat attttactcg tcttaattat gagctggata 2460 ttatttgtaa tatgaatttt gccggttatt ttttgattgt atcagatttt attaaatgga 2520 gcaaaaaaca gggtatttta gtaggacctg gtagaggttc tggagctgga tcagttgttg 2580 cgtggagctt acttgttact gacctcgatc cgattaaatt cggtttgtta tttgaaagat 2640 ttttaaatcc tgaacgtatt tcaatgcctg attttgatat tgatttttgt caagaaagga 2700 gagaggaagt aattaattat gtacgttcta aatacggtcc taatagagta ggacaaatta 2760 taacttttgg taagatgcag gcaaaagctg taattaagga tgttgctcgt gtacttagct 2820 taccttataa attggctgat tatctcactg agcttgtgcc ttttagtgct attaatccag 2880 tgagtctaga acaggcaata cgtgaagtcc cagagcttgc aaatgctgct aaaggtaatg 2940 gactatataa tttagagggt gatgcagagt taattaagtt agtgcttgat acttcgttaa 3000 ttcttgaggg gctacataga cattcctcaa cccatgctgc aggaatcgta atagcaggga 3060 ctgatttagt tgatatagta cctgtatata aagatgctaa cgccgatatg ttgattgtcg 3120 gttattctat gaaatattcc gagattgctg gtttaatcaa atttgatttt ttaggactcc 3180 aaactttaac agttattact aattgtaaaa aattacttaa agagcaaggt ataaaaatag 3240 attttgacga tatgacattt gatgataaaa agacttacca aatgttatgt aaaggtaaag 3300 gagtcggggt tttccaattt gaaagtattg gtatgaaaga tgcacttaga cgtcttaaac 3360 ctgattctat acatgatttg atagcccttg gtgcgttata ccgtcccggt cccatggaaa 3420 atatccctac atatatagct tgtaaacata aattacagca acctgattat ttacataaat 3480 tattagagcc gatattggaa gaaacatatg gagtggtaat atatcaagaa caagtacaaa 3540 gaatagcaca ggtgctagca gggtatacac tcggtgcagc tgatttgctt cgtagggcca 3600 tgggtaagaa gatcaaaaaa gaaatggagg agcaggaaga gatttttgta aaaggagcaa 3660 ttgctaataa tatttcaccg tctcaagcga aatctatttt ttctaccgta gctaaatttg 3720 ctggatatgg ttttaataaa gctcatgctg cagcttatgg tgttatttca taccaaactg 3780 cttatcttaa agctaattat cctgctgaat t 3811 // |
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