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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   Y10458; SV 1; linear; genomic DNA; STD; PRO; 1304 BP.
XX
AC   Y10458;
XX
DT   23-JAN-1997 (Rel. 50, Created)
DT   04-NOV-2002 (Rel. 73, Last updated, Version 4)
XX
DE   Cellvibrio japonicus arbA gene for endo-a1,5-arabinanase
XX
KW   arbA gene; endo-a1,5-arabinanase.
XX
OS   Cellvibrio japonicus
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Cellvibrio.
XX
RN   [1]
RX   PUBMED; 9163351.
RA   McKie V.A., Black G.W., Millward-Sadler S.J., Hazlewood G.P., Laurie J.I.,
RA   Gilbert H.J.;
RT   "Arabinanase A from Pseudomonas fluorescens subsp. cellulosa exhibits both
RT   an endo- and exo-mode of action";
RL   Biochem. J. 323:547-555(1997).
XX
RN   [2]
RP   1-1304
RA   Gilbert H.J.;
RT   ;
RL   Submitted (10-JAN-1997) to the EMBL/GenBank/DDBJ databases.
RL   H.J. Gilbert, Dept.of Biol. a.Nutritional Sciences, Univ. of Newcastle,
RL   upon Tyne, Newcastle, NE1 7RU, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1304
FT                   /organism="Cellvibrio japonicus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:155077"
FT   CDS             159..1202
FT                   /transl_table=11
FT                   /gene="arbA"
FT                   /product="endo-a1,5-arabinanase"
FT                   /EC_number="3.2.1.99"
FT                   /db_xref="GOA:P95470"
FT                   /db_xref="InterPro:IPR016840"
FT                   /db_xref="PDB:1GYD"
FT                   /db_xref="UniProtKB/TrEMBL:P95470"
FT                   /protein_id="CAA71485.1"
FT                   /translation="MPTHHPITRQHWHHSWLSALALLCASLACGAKQVDVHDPVMTREG
FT                   DTWYLFSTGPGITIYSSKDRVNWRYSDRAFGTEPTWAKRVSPSFDGHLWAPDIYQHKGL
FT                   FYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIDPAIIA
FT                   DDHGQVWMSFGSFWGGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEA
FT                   PFILRKGDYYYLFASWGLCCRKGDSTYHLVVGRSKQVTGPYLDKTGRDMNQGGGSLLIK
FT                   GNKRWVGLGHNSAYTWDGKDYLVLHAYEAADNYLQKLKILNLHWDGEGWPQVDEKELDS
FT                   YISQRLK"
XX
SQ   Sequence 1304 BP; 315 A; 342 C; 340 G; 307 T; 0 other;
     attgacaccg cactatccgc cgcttcaggc aaggcgggat aattcaggct tgagctggat        60
     gagcaaatac tattatattg caatattgtc agacaatata aacaacaaag cttaaccctg       120
     ccaagacact gcagcggttt tatgagagga gagttcccat gcccacccac cacccgatca       180
     cccgccagca ctggcaccac tcttggttgt ccgcacttgc actgctctgt gcaagccttg       240
     cctgtggtgc caaacaggtc gatgtgcacg atccggtcat gacccgcgaa ggcgatacct       300
     ggtatttgtt cagtaccggc cccggcatca ccatatacag ctccaaagac cgcgttaact       360
     ggcgctactc cgaccgcgcc tttggcaccg agcccacctg ggccaaacgt gtttcgccct       420
     cctttgacgg gcatttgtgg gccccggata tttaccagca caaaggcctg ttttacctct       480
     attactccgt ttcggccttt ggcaaaaata cctcggcgat tggcgtaacg gtgaataaaa       540
     cgcttaatcc ggcctccccc gattaccgct gggaagacaa gggtatcgtg attgaatccg       600
     ttccccagcg cgacctgtgg aatgcgattg atccggcgat cattgccgat gaccatggcc       660
     aggtgtggat gagttttggt tccttctggg gcggattaaa actcttcaaa ctcaatgatg       720
     acctgacccg ccctgcggag ccccaggagt ggcatagcat cgccaaactc gaacgctcgg       780
     tactgatgga tgacagccag gcgggcagcg cgcagattga agcgccgttt atattgcgca       840
     agggcgatta ttattatttg tttgccagtt ggggactctg ctgccgcaaa ggtgattcca       900
     cttaccacct ggttgtgggc cgcagtaaac aggtgacggg gccttatctg gataaaacgg       960
     gccgggatat gaaccagggc ggcggtagcc tgttgatcaa aggcaacaaa cgctgggtcg      1020
     gactcggcca taacagtgcc tatacctggg acggcaagga ttacctggtg ttacatgcct      1080
     atgaagccgc tgataattac ctgcaaaaac tgaaaatcct caacctgcat tgggatggcg      1140
     aaggttggcc acaagtcgat gaaaaggaat tggatagtta catcagccaa cgtttgaaat      1200
     aactgttggt taataaactc gcgcggttat cagtaaataa tctgtcgatg tgctgttgaa      1260
     agtcttatgc tggtaatcag tacttttttg cgggcgaggt accc                       1304
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