![]() |
EBI DbfetchID Y09356; SV 1; linear; genomic DNA; STD; PRO; 5057 BP. XX AC Y09356; XX DT 08-JAN-1997 (Rel. 50, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 7) XX DE Pseudomonas fluorescens pmsC, pmsE, pmsA and pmsB genes XX KW activating enzyme; histidine decarboxylase; isochorismate synthase; KW pmsA gene; pmsB gene; pmsC gene; pmsE gene. XX OS Pseudomonas fluorescens OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RX DOI; 10.1128/JB.183.6.1909-1920.2001 RX PUBMED; 11222588. RA Mercado-Blanco J., van der Drift K.M.G.M., Olsson P.E., Thomas-Oates J.E., RA Van Loon L.C., Bakker P.A.H.M.; RT "Analysis of the pmsCEAB gene cluster involved in biosynthesis of salicylic RT acid and the siderophore pseudomonine in the biocontrol strain Pseudomonas RT fluorescens WCS374"; RL J. Bacteriol. 183(6):1909-1920(2001). XX RN [2] RC Revised by [3] RA Mercado-Blanco J.; RT ; RL Submitted (11-NOV-1996) to the EMBL/GenBank/DDBJ databases. RL J. Mercado-Blanco, Utrecht University, Dept. Plant Ecology and Evolutionary RL Biol, Section of Plant Pathology, P.O Box 800.84, 3508 TB Utrecht, RL NETHERLANDS XX RN [3] RP 1-5057 RA Mercado-Blanco J.; RT ; RL Submitted (07-JAN-1999) to the EMBL/GenBank/DDBJ databases. RL J. Mercado-Blanco, Dept. Proteccion de Cultivos, Instituto Agricultura RL Sostenible (C.S.I.C.), Apdo. 4084, 14080 Cordoba, SPAIN XX FH Key Location/Qualifiers FH FT source 1..5057 FT /organism="Pseudomonas fluorescens" FT /strain="WCS374" FT /mol_type="genomic DNA" FT /db_xref="taxon:294" FT misc_feature 115..133 FT /note="iron box regulatory element" FT misc_feature 150..168 FT /note="iron box regulatory element" FT RBS 192..196 FT CDS 207..1382 FT /transl_table=11 FT /gene="pmsC" FT /product="isochorismate synthase" FT /db_xref="GOA:P95475" FT /db_xref="InterPro:IPR004561" FT /db_xref="InterPro:IPR005801" FT /db_xref="InterPro:IPR015890" FT /db_xref="UniProtKB/TrEMBL:P95475" FT /protein_id="CAA70528.1" FT /translation="MRTGTLRTTEMEEVQLAEVQRSFSFTSGDRELAVTGMLQRIETPA FT IGGDDANSLFQQTIAQALDRAREAGQSNPIIVGAIPFDPAEPSCLYIPEHAQWRTRDIH FT AKTGMSTLPELIEQKNIPDEQAFKRAVEHAVVNFRHSDVRKAVLSVQRELIFANDVDVS FT ALQHNLKAQNPSGYHFRVPMPDGTTLIGVSPELLVRKEGLSSLSNPLAGSAKRMADPEA FT DRRNADWLLTSEKDHYEHGFVTQDIVSQLGKLCTQLNVPQRPSLISTPALWHLSTRIEG FT TLADPAVSALQLACRLHPTPAVCGFPTERARRLIRFVEPFERGLFTGMVGWCDAQGNGE FT WVVTIRCGTVRRNKVRLFAGAGIVEASSPDSEWAEVQTKLGTMLRACGLAH" FT CDS 1409..3244 FT /transl_table=11 FT /gene="pmsE" FT /product="ATP-dependent activating enzyme" FT /db_xref="GOA:P95476" FT /db_xref="HSSP:1MDB" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="InterPro:IPR011963" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:P95476" FT /protein_id="CAA70529.1" FT /translation="MTIEFNHWPLESAQRYRDKGYWLDKPLTHLLQERSQSQPDAPAII FT CGDRHFSYAELDQLSSNLASRLAASGLGNGDTALVQLPNIAEFYIVLFALLKSGIAPLN FT ALYSHRKLELKSYAKQIAPTLLIASREHEVFRDDSYIADFKEVGSSPDIILLLGEQRHE FT NNLADWINTPSESNVNVSPSGPGEVALFQLSGGSTGTPKLIPRTHNDYYYNARASAQVC FT ELTPRTRFLCALPAAHNFLLSSPGALGVLHAGGCIIMAPSPEPLTCFSIIQRQEVNTVA FT LVPSAVALWLQAAPEHKEQLQSLEFLQVGGACFADSLARQVPGVLGCKLQQVFGMAEGL FT INYTRLNDSDEQIFTTQGRPISPDDEIKIVDEQGLPVPDGEPGMLATRGPYTFCGYYQS FT PEQNAQAFDNEGYYYSGDLVQLMPSGDLRVVGRVKDQINRGGEKVASEEIENLIVLHPD FT VTHAGLVAMPDDRLGEKSCAFVVSRNPSLKPPALRRHLMELGIAEYKLPDRIRLIETMP FT LTPVGKIDKKHLRQLLAAETTRAWLQTRVRQLVEDCEDLDPEENLIFYGLDSLQVMRLA FT AELKERGIAVSFEELADSPTLSSWWSLVDARQIAA" FT RBS 3272..3277 FT CDS 3284..4501 FT /transl_table=11 FT /gene="pmsA" FT /product="pyridoxal-dependent histidine decarboxylase" FT /db_xref="GOA:P95477" FT /db_xref="InterPro:IPR002129" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/Swiss-Prot:P95477" FT /protein_id="CAA70530.1" FT /translation="MTLSPADQSKLEGFWQHCVTHQYFNIGYPESADFDYSQLHRFLQF FT SINNLLGTGNEYSNYLLNSFDFEKDVMTYFAELFNIALEDSWGYVTNGGTEGNMFGCYL FT GRELFPDGTLYYSKDTHYSVAKIVKLLRIKCRAVESLPNGEIDYDDLMAKITADQERHP FT IIFANIGTTMRGALDNIVTIQQRLQQAGIARHDYYLHADAALSGMILPFVDHPQPFSFA FT DGIDSICVSGHKMIGSPIPCGIVVAKRNNVARISVEVDYIRAHDKTISGSRNGHTPLMM FT WAALRSYSWAEWRHRIKHSLDTAQYAVDRFQASGIDAWRNENSITVVFPCPSERIATKY FT CLATSGNSAHLITTPHHHDCSMIDALIDEVVAEAQLNTLRSKRAFTEQTVVERLPAASF FT NLRTHY" FT RBS 4502..4507 FT CDS 4516..4851 FT /transl_table=11 FT /gene="pmsB" FT /function="salicylic acid biosynthesis" FT /db_xref="GOA:P95478" FT /db_xref="InterPro:IPR002701" FT /db_xref="InterPro:IPR008241" FT /db_xref="InterPro:IPR020822" FT /db_xref="UniProtKB/TrEMBL:P95478" FT /protein_id="CAA70531.1" FT /translation="MLPLKPPQACENLNDIRAGIDFFDRQILDSLQKRLRYVKAAAQFK FT ANEQDIPAPERVAAMLEERRLWAVEAELDVAFVEKLYEQIIHWNIQQQILHWRATRQPT FT YSAQAKS" XX SQ Sequence 5057 BP; 1171 A; 1554 C; 1302 G; 1030 T; 0 other; gaattcggca tacagatgag ctgaaacttt ccctaaaaac gcatgagcag tccgcccgat 60 ccaacaggcg gcttgcattg aagttaactc tctcatggct cactcatgtg attgacaaat 120 cgtaatgatt agcatcacat attagaaacg ataatgattc tatttcaagt ttctttttat 180 ccctaggcca cggaggcttc ccccaaatga gaacgggcac cctaagaacg accgagatgg 240 aagaggtgca actcgcagag gtacaacgta gtttttcgtt cacatccggc gatcgcgagt 300 tagcggtcac cgggatgctg cagagaattg aaacacctgc cattggcggc gatgacgcca 360 atagcctgtt ccagcagaca attgcgcaag cgcttgatcg ggcgcgcgaa gctggccaga 420 gcaacccaat catcgttggc gccatccctt tcgaccctgc tgaaccttcc tgcctctaca 480 ttcccgaaca cgcgcaatgg cggacccgag acatccacgc gaaaacgggt atgtcgacgc 540 tgcctgagtt gatcgaacag aaaaacattc cggacgaaca ggccttcaaa cgggcggtgg 600 aacacgccgt cgtcaacttc cgccacagcg acgtacgcaa ggctgtgctc tcggttcaac 660 gcgagctgat atttgcaaac gatgtggatg tgagtgccct gcagcacaac ctgaaagccc 720 agaacccgag cggctaccac ttccgtgtgc caatgcctga tggcaccacg ctgatcggtg 780 tcagtcccga acttctggtc cgcaaggaag gcctgagctc tctgtccaac ccgctggcag 840 ggtcagccaa gcgcatggcc gatccagaag ccgaccggcg caatgcagac tggttgctga 900 catcggaaaa agatcactac gaacacgggt tcgtgaccca ggacatcgtc agccaactgg 960 ggaaactgtg cacgcagctg aatgtgccgc aacgcccctc cctcatcagc acgcccgcgc 1020 tctggcacct ctcgacccgc atcgaaggta cgctggcaga cccggctgta tcggccttgc 1080 agcttgcctg ccgcttgcac cccacaccgg ctgtgtgcgg cttccccacc gagcgcgccc 1140 ggcgcctgat tcgcttcgtc gaacccttcg agcgcggcct gttcaccggc atggtgggtt 1200 ggtgcgatgc ccagggcaat ggcgaatggg tcgtaacgat tcgttgcggc acggtcaggc 1260 gaaacaaggt ccgcctgttc gccggcgcag gcatcgttga agcctcaagc cccgactccg 1320 aatgggcaga agtccagacc aaacttggca ccatgctgcg cgcctgcgga ttggcccact 1380 aactcgaatt ttttcacacg tgaatactat gactattgaa tttaaccact ggcctctgga 1440 aagcgcacag cgttatcggg acaaaggcta ttggctcgac aaaccgctca cccacctcct 1500 tcaggaacgc agccagtcgc aacccgacgc ccccgcgatt atttgcggcg atcgccactt 1560 cagctatgcc gagttggacc aattgtcttc caacctggcc tcgcgactgg ccgccagcgg 1620 gcttggcaac ggtgacactg cactggtgca gttgcccaat atcgcggagt tttacattgt 1680 cctttttgcc ctgctcaagt caggaatcgc acccctcaac gcgctctaca gccatcgcaa 1740 acttgaactc aagagttacg ccaaacaaat cgcgccaacg ttgttgattg cctcccgcga 1800 acatgaagtc ttccgtgacg acagctatat cgccgacttc aaggaggtgg gttcaagtcc 1860 agacatcatc ttgctgttgg gcgagcaacg tcacgaaaac aacctcgccg actggatcaa 1920 tacgccgagc gagagcaacg tgaacgtctc cccctcgggg cccggcgagg tcgcattgtt 1980 ccaactgtca ggcggcagca cgggcacccc caaactcatc ccccgcactc acaacgacta 2040 ttactacaac gccagggcaa gcgcgcaagt atgcgaactt acgccacgca cgcgctttct 2100 atgcgcgcta cctgccgccc ataacttctt gctcagctcc cccggcgccc tcggtgttct 2160 acatgctggc ggctgcatca tcatggcgcc cagcccggag cccttgacct gtttttcgat 2220 catccagcgc caagaagtca atactgtggc cttggtgcca agtgcagtcg ccttgtggct 2280 gcaggcagcg ccggagcata aagaacaact gcaatcgctt gagttcctcc aggtcggtgg 2340 cgcctgtttt gccgactcgc tggcacgcca ggtgcccggc gtgctcggtt gtaagctgca 2400 acaggtattc gggatggccg aaggcctgat caactacacc cggctaaatg actccgacga 2460 acagattttt actacccagg gccgtccgat cagccccgac gatgaaatca aaatcgttga 2520 cgaacaaggc ctccccgtcc cggacggaga acctggcatg ctcgccacac gtggccctta 2580 cactttttgc gggtactacc aaagccccga acaaaatgcc caggcgttcg ataacgaggg 2640 gtactactac tccggcgacc tcgtccaact catgcccagc ggcgatttgc gcgtggtcgg 2700 cagggtcaag gaccagatca accgtggcgg tgaaaaagtc gcctcggagg aaatcgaaaa 2760 cctcatcgtc ctccatcctg atgtgactca cgcgggcttg gtggccatgc ccgatgacag 2820 gctgggagaa aaaagctgcg cgttcgtcgt ctcacgcaac ccgagcctga agccgcccgc 2880 gctcagacgt cacctgatgg aactcggcat cgccgaatac aaactgcccg accgcatccg 2940 gttaatcgaa accatgccgc tgacccccgt gggcaagatt gacaagaagc atctgcgtca 3000 gcttctggca gcggaaacca cacgcgcctg gttgcagact cgcgtgcggc aactcgtcga 3060 ggactgtgaa gacctggacc ccgaggaaaa cctgattttc tatggcctcg actccttgca 3120 agtgatgaga ctcgctgccg aactcaagga gcgtggcatt gccgtcagct tcgaagaact 3180 ggcggattcg cccacgctca gcagctggtg gtcattggta gacgcgaggc agatagccgc 3240 ctgaccgggc ggcgtcaccc agtcgtttta aaaggagtta gacatgactt tatcccctgc 3300 cgaccaaagc aagcttgaag gcttctggca gcactgcgtg acacatcagt atttcaacat 3360 tgggtatccc gaatcagccg attttgatta ctcccagctg caccgtttct tgcagttttc 3420 aattaacaac ttgctgggga ctgggaatga gtacagcaac tacctgttga actcgttcga 3480 ctttgaaaaa gacgtcatga cgtatttcgc cgagctgttc aacattgccc ttgaagacag 3540 ttggggttac gtcaccaatg gcgggacgga aggcaatatg tttggctgct acctgggacg 3600 cgaactgttt ccggacggca ccctgtacta ctcgaaagac acccactact ccgtggcaaa 3660 gatcgtcaaa ttattgcgga tcaaatgccg tgcggtcgaa tcgctgccca atggcgaaat 3720 cgactacgac gacctgatgg caaaaataac cgccgaccag gagcgtcacc ccatcatctt 3780 cgccaacatc ggcaccacga tgcgtggagc cctggataat atcgtgacca tccagcaacg 3840 cctgcaacag gcaggcattg cccgccacga ctactacctg cacgctgatg cggccttgag 3900 cgggatgatc ctgcccttcg tcgatcaccc acaacccttc tcgtttgccg acggcatcga 3960 ctcgatctgc gtctccggcc acaagatgat cggctcgccc attccttgcg gaattgtcgt 4020 ggccaaacgc aacaacgtcg cgcgcatttc agtggaagtg gactatatcc gcgcccatga 4080 caagaccatc agcggctcgc gcaacggcca cacacccctg atgatgtggg cggcactgcg 4140 cagctactca tgggctgaat ggcgccatcg aatcaaacac agcctggaca cggcacagta 4200 cgccgtcgac cgcttccagg cctcgggcat tgatgcctgg cgcaacgaaa actccatcac 4260 cgtcgtgttc ccttgcccat cagaaagaat tgcgacgaaa tactgcctgg ccacctccgg 4320 taattcggca cacctgatca ccacacctca tcatcacgac tgcagcatga tcgacgcctt 4380 gatcgacgaa gtggttgccg aagctcaact gaataccctt cgatccaagc gagcattcac 4440 tgaacaaacg gtcgtcgagc gattgcccgc ggcgtcattc aacttgcgta cccattattg 4500 aaagagacca gcctcatgct gccgctaaaa ccgccacaag cctgcgagaa cctcaatgac 4560 attcgagcgg gcatcgactt ttttgaccgc cagatccttg actcgctaca aaaacgcctg 4620 cgttacgtaa aggctgcggc gcagttcaaa gccaacgagc aggacattcc agcacctgaa 4680 cgcgtcgcgg ccatgcttga ggagcggcga ctatgggcgg tagaagccga acttgatgtc 4740 gctttcgtcg agaagctcta cgagcagatt attcactgga atattcaaca gcaaatcctg 4800 cattggcggg ccacccgaca accaacgtac tcggcgcagg ccaagtcatg acgatggcgg 4860 gtggatgcct gacgacttga ggtctgcgat tcacgcgggc tgtccttgtt cgagtggtgt 4920 gtgttcacaa ctatcaccgt agaccaaggg cggccttttc ttcatttttt tgtaatcaga 4980 tcagcctgtt agctgttaat taagtgccat tcaaatctgt cccctttttt tttcgccata 5040 atgctgatat cgaattc 5057 // ![]() |