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EBI DbfetchID X98238; SV 1; linear; genomic DNA; STD; PRO; 7047 BP. XX AC X98238; XX DT 05-JUN-1996 (Rel. 47, Created) DT 01-JUL-1996 (Rel. 48, Last updated, Version 5) XX DE L.sake gene cluster XX KW dipeptidase. XX OS Lactobacillus sakei OC Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. XX RN [1] RA van den Berg D.J.C., Toonen M.Y., Robijn G.W., Kamerling J.P., RA Vliegenthart J.F.G., van der Swaluw C.D.M., Ledoboer A.M., Verrips C.T.; RT "Isolation, characterization, and disruption of the putative RT exopolysaccharide gene cluster from Lactobactillus sake 0-1"; RL Unpublished. XX RN [2] RP 1-7047 RA van den Berg D.J.C.; RT ; RL Submitted (03-JUN-1996) to the EMBL/GenBank/DDBJ databases. RL D.J.C. van den Berg, Unilever Research Laboratorium, Microbial RL Biotechnology, Olivier van Noortlaan 120, Vlaardingen, NL-3133 AT, RL Netherlands XX DR RFAM; RF00005; tRNA. XX FH Key Location/Qualifiers FH FT source 1..7047 FT /organism="Lactobacillus sakei" FT /strain="0-1" FT /mol_type="genomic DNA" FT /db_xref="taxon:1599" FT CDS <1..630 FT /transl_table=11 FT /note="orf6" FT /db_xref="GOA:Q48838" FT /db_xref="InterPro:IPR005130" FT /db_xref="UniProtKB/Swiss-Prot:Q48838" FT /protein_id="CAA66890.1" FT /translation="DIMLEAVQNAIATNEVNASMGIICATPTAGSAGTLPGILSVITKQ FT LSLDRDAQIRFLFCASAFGMVVANDAMIAGATGGCQAEVGSASAMGAAAAVEAAGGTHQ FT QSSEAFAMAMSNLLGLVCDPVAGLVEVPCVKRNVIGSVNALTSADMALAGLVSKIPADE FT VISAMKSIGENLPSTLRETGLGGLAATPTGIALKMQIFGQDMSIDK" FT CDS 660..2597 FT /transl_table=11 FT /function="unknown" FT /note="orf5" FT /db_xref="InterPro:IPR004813" FT /db_xref="UniProtKB/TrEMBL:Q48839" FT /protein_id="CAA66891.1" FT /translation="MQKKLSKSAYGGISGEKYVPYVSQGNKKVGNTAILIMGSLLAIIF FT AASTAYSGMKPGLTVAAGIPGSIIGSGLVGAFAKSKGILGKNIMQGMSSGGESIASGMI FT YVLPAIVLIGGHINFIEGLIVGILAILFSIGTSSLVHNYLVVEEHGNLVYPEAMAISEA FT LVASDTGGDSLKYMGIGFGIGGVITMLTTSVFGVVNNMMNYVGSSFYKWKLDVEVNPLL FT AGXGFIVGLEVALTMFAGALLSNFAIAPLIGYFTDMAGNGAHVWNNASLAVNQMTVNDL FT ASSYVKYIGAGMMLCGGLIGAIKLIPTIVTSIKKTLNAKNTTGEDKNTLGMVSIVLGAV FT GIFVIGIIIAQNFMMGIVGALLAVILSLLFVIVSARIAGTIGGSNLPVSGMTIASLVIM FT TVVFVLFGWTSNAHTQILLMFGTFVVTAIAVGGGYMQSQKVTYVIGGSKSEMMKYFMIS FT AFIGVVVVIGTISILSPQFVTDSATPAFGLPQANLIATLTSGIMSGELPWIMIIVGVAM FT AIVLYFLELPIMTVAIGFYLPISTTSIILIGALIKVFIDKVTGDEAVKNNRIQSGISLS FT SGLIAGGSIIGLIGIILHVTGVLKDRVISGFASSNEMALILLVVMIVAIAAPLMMIKKG FT GDSEDEEAKG" FT CDS 2578..2931 FT /transl_table=11 FT /note="orf0" FT /db_xref="UniProtKB/TrEMBL:Q48840" FT /protein_id="CAA66892.1" FT /translation="MRKQKAEVDLNQLIFAKVPEVKFQLKAGQVTIIRPQDHWIQRFFR FT RLHVRIPAESKLTLDDYGSFVFRHVNGQRSVYQIGQALAAEYDETNDYLYERLLVYLNH FT LEQTEHLIKRVTD" FT CDS 2989..4410 FT /transl_table=11 FT /function="dipeptidase" FT /note="putative" FT /note="orf1" FT /db_xref="GOA:Q48841" FT /db_xref="InterPro:IPR005322" FT /db_xref="UniProtKB/Swiss-Prot:Q48841" FT /protein_id="CAA66893.1" FT /translation="MTDRIELSACTSMMVGKNASIDGSTMISRNEDRFYAIHPKRFFVQ FT PAVHNRHETYVSKYNGLTMPLPEEGYRYTSTPNGDLSDGLNEEDGINEKNVALSATESV FT YANERVLAYDPLIKNGLAEDSMCSLVLPYINSAREGVKLMGDIVTKYGSAEGNGIQYSD FT ENEVWYQEIVTGHHWVAAKIPDDCYAVAANQVAIENIDFNDPDNYMWSEGIQEFVSGNH FT LNPSETEWNFRKIFGTDTEKDRHYNTPRVWYAQRYLNPEIKQEPESSDLPFIRKANRKL FT SVEDVQYVLKSHYNETEYDPLGNGTEEQKTTYRAISLSRTQNSHICQIRNNVPDAVKGV FT QWLGFGVPTFCPHVPFFTNANDTDETYRELPEKMTLKNAYWLHEALAMIVESHYGAFKQ FT ADIDYQKALSEWARTKIAATDKAIENQADAVAFLTAQNHEIATHYNEATTDLLAQLVTE FT GTQLSKLTFVMDKNL" FT CDS 4484..5335 FT /transl_table=11 FT /note="orf2" FT /db_xref="InterPro:IPR019264" FT /db_xref="UniProtKB/TrEMBL:Q48842" FT /protein_id="CAA66894.1" FT /translation="MTDLKMSSKRIVIAMVYGFLAAVSVNLFLIPAKTYSSGVTGVAQL FT LTALVSHLGGSLSVAALVFILNVPLLVLAWFKINHQYAIFSIVAVFTSVIFLKIIPVPV FT QPILTERFAGALFGGALIGLGVGLCFRAGFSTGGTDVIVTLVGRLTGKRVGAVNNVING FT MIILAAGIFFGWGAALYSIVEIFVSSLLMDYIYTQQQKVTVTIFTKQPEALKKRMREFI FT HGATELDGTGLYTNQETSVIMTVVSKYDLTALKLVVQDADPNAFVNIQSTMNLWGRFES FT NE" FT CDS 5798..6640 FT /transl_table=11 FT /note="orf4" FT /db_xref="GOA:Q48843" FT /db_xref="InterPro:IPR000150" FT /db_xref="UniProtKB/TrEMBL:Q48843" FT /protein_id="CAA66889.1" FT /translation="MEPYLVFSDIDGTLVIDHQIVTPFTKRVIRELQQRDVIFYIATGR FT MYNLGKVIARQINDDARIIASNGAVFENEQGSVQHHLGHPALKAAYEITQSDPRLSAHF FT FTTDAAYYTREIPRFVARDAGNLTSMGAEIAYDSVNDLDTLLAMSNQIINGVIVAKGEP FT ALLASVKQYLAEQDVMNLSSSGPDNIELIPKGIDKATAIRQIQTLHGIDADHTFVFGDG FT QNDLGMLQAAKYSVAMGNALPEVKAVANYVTESNVNDGVAKFLQKHFELSLSDSEVGL" XX SQ Sequence 7047 BP; 2096 A; 1181 C; 1583 G; 2186 T; 1 other; gatatcatgt tggaagccgt tcaaaatgcc attgcaacaa atgaagttaa tgcgtcaatg 60 gggattattt gtgcaacacc aacggcaggt tctgcaggta ctttaccagg tattttatcg 120 gtgattacaa aacagttatc actcgatcgt gatgcgcaga ttcgtttctt attttgtgcg 180 tctgcttttg ggatggttgt tgctaatgat gcgatgattg cgggtgcaac aggtggttgc 240 caagcagaag tcggaagtgc ctcagcaatg ggggcggccg cagcagtcga agcagctggt 300 ggaacacacc aacaatcttc agaagctttt gcaatggcca tgtctaattt attaggatta 360 gtttgtgatc ccgtcgcagg gttagttgaa gtgccatgtg ttaagcggaa tgtgattggg 420 tccgtcaacg ctttaacaag tgctgatatg gcacttgctg gtttagtaag taaaattcca 480 gctgatgagg tcattagtgc aatgaagagt attggtgaaa acctaccttc aacactgaga 540 gaaactggct taggcggttt agcagcaaca ccaactggga ttgcgcttaa aatgcaaatt 600 tttggtcaag atatgagtat tgataaataa atagctttgc tattttagga ggaaattcga 660 tgcaaaagaa gctttcaaaa tcagcatacg gtggcatttc gggagaaaag tatgtcccgt 720 atgtcagcca agggaataag aaagtcggta atacagccat tttaattatg gggagcttat 780 tagctattat tttcgcagct tccacagctt attcaggaat gaagcccggt ttaactgttg 840 cggccggcat tccaggttca atcattggtt caggtttagt aggggctttc gctaaatcaa 900 aagggatttt aggtaaaaat atcatgcaag ggatgtccag tggtggggaa tcaatcgcca 960 gtgggatgat ttatgtttta ccagccatcg ttttaattgg tggtcatatc aactttattg 1020 aaggattaat tgttgggatt ttagcaattc tcttttcaat tgggacatct tcattagtgc 1080 ataactactt agttgttgaa gaacatggta acttggttta tccagaagcc atggcgattt 1140 cagaagcgct agttgcttct gatactggtg gcgattcttt gaaatacatg ggaattggct 1200 ttggtatcgg tggcgttatt acgatgttaa caacttctgt ttttggtgtt gttaacaata 1260 tgatgaacta tgttggctca tcattttata aatggaaatt agacgttgaa gttaacccct 1320 tactagcagg gaktgggttc attgttgggt tagaagtcgc attaacaatg tttgcgggtg 1380 ctttattatc aaactttgcc attgcaccac ttatcggtta ctttactgat atggctggca 1440 acggcgctca tgtttggaat aacgcaagct tagctgttaa ccaaatgaca gttaacgatt 1500 tagcaagttc atacgttaaa tatattggtg ctgggatgat gctttgtggt ggtttaattg 1560 gtgccattaa attaatccca acaattgtca catcaatcaa gaagacatta aacgctaaaa 1620 acacaacagg tgaagataaa aacacacttg gcatggtttc aattgtactt ggtgctgttg 1680 ggatctttgt aattggtatt attattgccc aaaacttcat gatggggatt gttggtgcac 1740 tattagctgt tatcttaagt ttattatttg ttatcgtatc agctcgaatt gccggtacaa 1800 ttggtggttc taacttacct gtatcaggga tgacaattgc ttcattagtg attatgacgg 1860 ttgtcttcgt cttattcggt tggacaagca atgcgcatac acaaatctta ttaatgtttg 1920 ggactttcgt tgtgacagca atcgctgttg gtggtggcta catgcaatca caaaaagtaa 1980 cttatgttat cggtggttct aaatcagaaa tgatgaaata cttcatgatt tcagcattta 2040 tcggtgttgt tgttgttatt gggacaatca gtatcttatc accacaattt gtcacagaca 2100 gtgcaacacc tgcttttggt ttgccacaag ctaacttaat cgcaacgtta acatcaggta 2160 ttatgtctgg tgaattacca tggattatga ttatcgttgg ggttgcaatg gccattgtat 2220 tatacttctt agaattacca attatgactg ttgcgattgg tttttactta ccaatttcaa 2280 caacatcaat cattttaatt ggtgctttaa ttaaagtgtt tatcgataaa gttactggtg 2340 atgaagctgt taagaataat cgaatccaaa gtgggattag tttatcttca ggtttaatcg 2400 ctggtggttc aattatcggc ttaatcggga ttatcctcca tgtcacaggt gttctaaaag 2460 accgcgtgat ttcaggtttt gcaagcagta acgaaatggc attgattctc ttagttgtca 2520 tgattgttgc gattgcagca ccattgatga tgatcaaaaa aggaggagat agcgaagatg 2580 aggaagcaaa aggctgaagt tgatttaaat caactaatct ttgctaaggt cccagaagtt 2640 aagtttcaat taaaagcggg acaggtaacc attattcgtc ctcaggatca ttggattcaa 2700 cgattcttta gacggttaca cgtcagaatt ccagctgaat caaaattgac gctggatgat 2760 tatggtagtt tcgtatttag acacgttaat ggtcagcgga gtgtttatca gattggccaa 2820 gcactcgcag ccgaatatga tgaaacaaac gactatctat atgaacgatt actcgtttat 2880 ttaaatcatt tagaacaaac tgaacattta atcaaacgtg tgacggattg agttaattaa 2940 agttgtgaat catgattaaa atagcttata gataaaggag tttttcaaat gacagacaga 3000 atcgagttat ccgcatgtac ttcaatgatg gtgggcaaga atgcgtcaat tgatggctct 3060 acgatgattt cgcgtaatga agatcgcttt tatgcgatcc accctaaacg tttcttcgta 3120 caaccagcag tgcacaatcg gcacgaaaca tatgtttcta aatataatgg gttaaccatg 3180 ccattaccag aagaaggtta tcgttatacc tctaccccta atggtgattt aagtgatggt 3240 ttgaatgaag aagacggcat taacgaaaaa aacgtcgcac tttctgcaac ggaaagtgtc 3300 tacgctaacg aacgggtttt agcatacgat ccgttgatta agaatggttt agcagaagac 3360 tcaatgtgtt cactcgtatt accatacatt aactcagcac gtgaaggggt taaattgatg 3420 ggcgatatcg ttacgaaata cggctcagcc gaaggtaacg gtattcaata cagtgatgaa 3480 aatgaagttt ggtatcaaga aatcgtaaca ggtcaccact gggtagccgc taagattcca 3540 gacgactgtt acgcagttgc agcaaaccaa gttgcaattg aaaatattga ttttaatgac 3600 cctgataact atatgtggtc agagggcatt caagaatttg ttagtggaaa tcacttgaac 3660 ccaagtgaga cagaatggaa tttccggaag atttttggaa cagatacgga aaaagaccgg 3720 cactataaca caccacgtgt ttggtacgca caacgttatc tcaatccaga aattaaacaa 3780 gaaccagaat caagtgattt accatttatc cggaaagcaa atcgcaaatt aagtgtggaa 3840 gatgttcaat atgtgttaaa atcacattat aacgaaacag aatacgatcc acttggtaat 3900 gggacggaag aacaaaagac gacttatcgt gcaatttcgc tttcacggac acaaaattcc 3960 catatttgtc agattagaaa taatgtgcct gatgcggtga aaggtgttca atggttaggt 4020 tttggtgtac cgacattctg ccctcacgtg cctttcttta cgaatgcaaa tgatacggat 4080 gaaacttatc gtgaattgcc agaaaagatg accttaaaga atgcttattg gttacatgaa 4140 gcattagcaa tgattgttga atcgcattat ggtgcgttta aacaagctga tatcgattat 4200 caaaaggcat tatcagaatg ggcaagaact aagattgctg caactgataa agcaattgaa 4260 aatcaagctg acgcagtggc ctttttgacg gctcaaaatc atgagattgc aacgcattat 4320 aatgaagcaa caactgattt gttagcacag ttagtcacag aaggcacgca attgtctaag 4380 ttgacctttg taatggataa gaatctttaa gagaatcgga cttttaatta atttgtcaca 4440 cttccaaggg gggagtgtga cttttttgat ggaggtgctg agaatgactg atttaaaaat 4500 gagttccaag cgaattgtaa tcgcaatggt ttatggtttt ttagcagcgg tcagtgtgaa 4560 tctattcttg attcctgcta agacgtattc aagtggtgtg acgggggttg cacaattatt 4620 aacagcgcta gtgtcacacc ttggtggttc tttgagtgtg gcggccttag tgtttatcct 4680 gaatgtgccg ctgttagtat tggcatggtt taaaatcaat catcaatatg caattttcag 4740 tattgttgcg gtttttacaa gtgtcatttt tctaaaaatc attccagtac cagttcaacc 4800 cattctaacg gaacgctttg cgggtgctct gtttggtggg gcattaattg gccttggtgt 4860 tggtctttgt tttagagctg gtttttccac tgggggaact gatgttattg tgacccttgt 4920 tggtcggtta acaggcaagc gagtgggtgc cgtgaacaac gtcattaacg gcatgattat 4980 cctcgctgct ggtattttct ttggttgggg tgctgcttta tatagtatcg ttgaaatctt 5040 cgtatcgagc ttattaatgg actatattta cacgcaacaa caaaaggtga cagtaacgat 5100 ttttacgaag cagcctgaag cgttaaagaa acgaatgcgc gaatttatcc atggtgcgac 5160 cgaattggat gggacgggct tatatacgaa tcaggagaca tctgtgatta tgacagttgt 5220 ttctaaatat gatttgaccg cccttaaatt agtggtgcaa gatgcagatc caaatgcgtt 5280 tgttaatatt caatcgacaa tgaatttatg gggtcgcttt gaaagtaatg aataaaaaag 5340 agccgattca acaagattaa ttgttgaatc ggctctttta ggactatttt gttttagcgg 5400 ctttcaattg tttaagatta acaacaattt tgttgtttaa ttccgaaacg ttagctttat 5460 caactgcgtc gaaatccgtg atggtgacta aagctgagtt ttcatatacc ttttcgacag 5520 ttcctgtaaa agctgactct agatcttcgt tgactttacc agtgacaata tcaccgatat 5580 tgagattttc tttatccatc gtaaaaactc ctttagacat aataaaatta ccaaataagg 5640 tgataataaa ctatgtcact ctaaatagca agctctaacc aagtaaaaag aaaataaatc 5700 ggtgacacaa ttgctgatag ctatttaatt tataaagtaa ataggctaga atagagttat 5760 gttagcgatt acaaaagcgg ctgaaaaagg agttattatg gaaccttact tagttttttc 5820 agatattgat gggacattag tcattgatca tcaaattgtc acaccattta cgaagcgggt 5880 tattcgagaa ctacagcaac gagatgtgat attttatatt gcaaccggac gaatgtataa 5940 tcttggaaaa gtaattgcac gtcaaattaa tgatgatgca cgaattattg cctctaatgg 6000 tgctgtattt gaaaatgagc aaggaagtgt tcaacatcat ttaggtcacc ctgcgctaaa 6060 agcagcttac gaaatcacac aatcagatcc gcgattatca gcccattttt ttacgactga 6120 tgcggcatat tatacacgtg aaattccgcg gtttgtggca cgtgatgcgg ggaacctcac 6180 cagtatgggg gccgaaattg cttatgactc agtcaatgat ttagatactt tgctagcgat 6240 gagtaatcag attattaatg gtgttattgt tgcgaaaggt gaaccagcat tactagcgtc 6300 agtgaaacaa tacctagctg aacaagatgt gatgaattta tcatcatccg gaccggataa 6360 tatcgaatta attcctaagg gaatcgataa ggcaacggcg attcgccaaa ttcaaaccct 6420 acatgggatt gatgcagatc atacctttgt ttttggggat ggtcaaaatg atcttggcat 6480 gttacaagcg gctaagtata gtgttgcaat gggaaatgct ttaccagaag taaaagcagt 6540 cgctaattat gtgacggaga gtaatgttaa cgatggtgtc gctaagtttt tacaaaaaca 6600 ttttgaatta tcattatcag attcagaagt tggcctttag ggacttgacc cgctttttat 6660 ttttcgatat acttatatca cggtcatcaa ttagccgtga ttatgctgtt ttagctcagt 6720 aggtagagca tcaccatggt aaggtggggg tcgtcggttc aaatccgata aacagcttaa 6780 taatcattcg aattaaagac tgttgctaat gtgcaacggt ctttttttgt accaaaaaag 6840 gaaacgctta ggcaatcgtt tccttagtgg ttgtaatgtt ttggtagtat tgaggatcga 6900 ggctagtaat gagtgggctg agggtaccaa ttcccaacaa ggttaagtcg tgcatggcac 6960 gcgtcatcag tgtgtagagt aagtcaacgt cacttgattg gccaaaggtg gttgctgaaa 7020 tgtcgtaacc aatgacagca tgaattc 7047 // |
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